Query 031606
Match_columns 156
No_of_seqs 166 out of 1022
Neff 4.3
Searched_HMMs 29240
Date Mon Mar 25 03:55:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031606.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031606hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ip4_C Aspartyl/glutamyl-tRNA( 99.9 3.2E-24 1.1E-28 157.1 9.7 81 55-136 1-81 (100)
2 3h0l_C Glutamyl-tRNA(Gln) amid 99.9 3.6E-23 1.2E-27 149.9 8.7 78 57-136 1-78 (94)
3 3kfu_G Glutamyl-tRNA(Gln) amid 99.9 9.8E-22 3.3E-26 142.2 9.2 74 56-136 4-77 (92)
4 3al0_C Glutamyl-tRNA(Gln) amid 99.8 6.8E-19 2.3E-23 161.2 6.7 82 55-137 2-83 (592)
5 2rod_B NOXA, noxaa; MCL-1, apo 72.8 0.26 8.9E-06 28.0 -1.9 13 141-153 15-27 (27)
6 1taf_B TFIID TBP associated fa 44.8 68 0.0023 21.5 6.1 41 54-94 3-44 (70)
7 1h8b_A ACT-EF34, alpha-actinin 43.3 15 0.00052 24.4 2.4 27 52-85 20-46 (75)
8 3a1k_A Amidase; AS family enzy 42.1 26 0.0009 31.0 4.5 45 56-100 4-48 (521)
9 2lv7_A Calcium-binding protein 41.3 30 0.001 23.4 3.8 32 54-85 49-80 (100)
10 1tiz_A Calmodulin-related prot 40.1 44 0.0015 19.2 4.0 32 54-85 14-45 (67)
11 2lhi_A Calmodulin, serine/thre 38.7 48 0.0016 24.1 4.8 32 54-85 97-128 (176)
12 2kn2_A Calmodulin; S MAPK phos 37.7 49 0.0017 20.6 4.2 31 55-85 23-53 (92)
13 3deu_A Transcriptional regulat 37.0 34 0.0012 24.6 3.7 28 73-100 139-166 (166)
14 3o0r_C Nitric oxide reductase 36.5 29 0.001 24.3 3.2 22 85-106 121-142 (146)
15 1s6j_A CDPK, calcium-dependent 35.4 44 0.0015 20.6 3.7 32 54-85 36-67 (87)
16 2d8n_A Recoverin; structural g 35.3 66 0.0023 23.0 5.1 31 56-88 14-44 (207)
17 1avs_A Troponin C; muscle cont 35.1 58 0.002 20.4 4.2 32 54-85 33-64 (90)
18 2kz2_A Calmodulin, CAM; TR2C, 34.4 72 0.0024 20.6 4.7 32 54-85 42-73 (94)
19 3i5g_C Myosin catalytic light 32.2 38 0.0013 24.2 3.3 32 54-85 98-129 (159)
20 1k2h_A S100A1, S-100 protein, 31.3 89 0.0031 19.4 4.7 31 57-87 27-62 (93)
21 3a1y_A 50S ribosomal protein P 30.8 88 0.003 20.0 4.6 32 56-87 15-46 (58)
22 1exr_A Calmodulin; high resolu 30.7 88 0.003 21.0 4.9 32 54-85 96-127 (148)
23 4ds7_A Calmodulin, CAM; protei 29.8 74 0.0025 20.9 4.2 33 54-86 97-129 (147)
24 2joj_A Centrin protein; N-term 28.9 49 0.0017 19.8 3.0 31 55-85 21-51 (77)
25 2lbf_B 60S acidic ribosomal pr 28.9 50 0.0017 22.2 3.2 32 56-87 17-48 (70)
26 2ktg_A Calmodulin, putative; e 28.7 57 0.0019 19.9 3.3 32 55-86 28-59 (85)
27 2e9x_A DNA replication complex 28.2 87 0.003 23.1 4.8 32 72-103 104-138 (149)
28 3qrx_A Centrin; calcium-bindin 27.9 1.1E+02 0.0036 20.8 4.9 32 54-85 114-145 (169)
29 3i5g_B Myosin regulatory light 27.2 55 0.0019 23.2 3.4 31 54-84 98-128 (153)
30 4aik_A Transcriptional regulat 27.0 63 0.0022 23.0 3.7 27 72-98 116-142 (151)
31 2ovk_B RLC, myosin regulatory 27.0 88 0.003 21.0 4.3 33 54-86 98-130 (153)
32 3rm1_A Protein S100-B; alpha-h 26.7 1.1E+02 0.0037 19.7 4.6 31 56-86 26-61 (92)
33 2b1u_A Calmodulin-like protein 26.7 40 0.0014 19.8 2.2 30 55-84 20-49 (71)
34 2obh_A Centrin-2; DNA repair c 26.4 1.2E+02 0.004 20.4 4.9 32 54-85 92-123 (143)
35 4gyt_A Uncharacterized protein 26.2 49 0.0017 25.3 3.1 36 59-94 134-170 (194)
36 2lmt_A Calmodulin-related prot 26.1 86 0.003 21.4 4.2 32 54-85 96-127 (148)
37 3bpv_A Transcriptional regulat 26.1 1.5E+02 0.005 19.7 5.4 26 71-96 112-137 (138)
38 4hbl_A Transcriptional regulat 25.7 71 0.0024 22.1 3.7 27 72-98 122-148 (149)
39 2lbf_A 60S acidic ribosomal pr 25.6 58 0.002 21.7 3.0 31 56-86 21-51 (69)
40 3j04_B Myosin regulatory light 25.4 65 0.0022 21.3 3.3 31 54-84 89-119 (143)
41 2fji_1 Exocyst complex compone 24.8 1.2E+02 0.0042 25.4 5.6 51 56-107 337-387 (399)
42 1ggw_A Protein (CDC4P); light 24.8 71 0.0024 21.1 3.4 31 54-84 89-119 (140)
43 2bl0_C Myosin regulatory light 24.5 95 0.0033 20.4 4.0 32 54-85 92-123 (142)
44 3nrv_A Putative transcriptiona 23.7 83 0.0028 21.4 3.7 25 72-96 124-148 (148)
45 1wlz_A DJBP, CAP-binding prote 23.4 67 0.0023 20.6 3.0 32 54-85 37-68 (105)
46 3k0l_A Repressor protein; heli 23.3 84 0.0029 22.0 3.8 30 71-100 129-158 (162)
47 2wuj_A Septum site-determining 23.3 21 0.00072 22.8 0.4 36 56-91 1-37 (57)
48 1k94_A Grancalcin; penta-EF-ha 22.9 1.5E+02 0.0053 20.1 5.0 32 55-86 84-115 (165)
49 5pal_A Parvalbumin; calcium-bi 22.8 1E+02 0.0035 19.7 3.8 32 54-85 54-88 (109)
50 2mys_B Myosin; muscle protein, 22.6 1.4E+02 0.0048 20.2 4.7 33 54-86 108-140 (166)
51 3s2w_A Transcriptional regulat 22.3 94 0.0032 21.6 3.8 24 73-96 135-158 (159)
52 3ox6_A Calcium-binding protein 22.1 1.7E+02 0.0058 19.0 5.1 33 54-86 24-56 (153)
53 2qac_A Myosin A tail domain in 21.8 94 0.0032 20.6 3.6 32 55-86 98-129 (146)
54 2veb_A Protoglobin; hemoprotei 21.6 93 0.0032 24.7 4.0 40 46-87 6-47 (195)
55 1rwy_A Parvalbumin alpha; EF-h 21.5 1.1E+02 0.0039 19.4 3.8 31 55-85 55-88 (109)
56 3nso_A Protein S100-A3; EF-han 21.5 1.2E+02 0.0042 20.6 4.2 33 55-87 26-63 (101)
57 2jnf_A Troponin C; stretch act 21.4 1.2E+02 0.004 20.3 4.1 32 54-85 104-135 (158)
58 2jjz_A Ionized calcium-binding 21.3 1.7E+02 0.0058 20.3 5.0 33 55-87 64-96 (150)
59 2gxg_A 146AA long hypothetical 20.9 1.9E+02 0.0067 19.3 5.6 29 69-97 117-145 (146)
60 1k9u_A Polcalcin PHL P 7; poll 20.8 98 0.0033 18.5 3.3 29 55-84 17-45 (78)
61 3h4s_E KCBP interacting Ca2+-b 20.5 1.2E+02 0.0042 20.6 4.1 32 54-85 53-85 (135)
62 3gr3_A Nitroreductase; structu 20.2 1.5E+02 0.005 22.3 4.8 40 45-88 18-70 (230)
63 3ll8_B Calcineurin subunit B t 20.1 1.9E+02 0.0067 18.9 5.0 32 54-85 88-120 (155)
No 1
>3ip4_C Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase; multi protein complex, ligase, ATP-binding, nucleotide-bindi protein biosynthesis; 1.90A {Staphylococcus aureus subsp} SCOP: a.137.12.1 PDB: 2df4_C 2dqn_C* 2g5h_C 2g5i_C* 2f2a_C
Probab=99.91 E-value=3.2e-24 Score=157.15 Aligned_cols=81 Identities=17% Similarity=0.225 Sum_probs=75.7
Q ss_pred CCCCChhHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCcccccCCCCCCCCCCcccCCCChHHHHH
Q 031606 55 RSSLEPPDVPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRAGSKREKNTLCYYPRICAGGTSLII 134 (156)
Q Consensus 55 ~m~I~kEeVkkIA~LARL~LsEEEle~~~~qLn~ILe~~d~L~eVDTegVEPm~r~dev~~s~~ReDep~~~~~~~~LL~ 134 (156)
||+||+++|+|||+||||+|+++|++.+.++|++||+||++|++|||+||+||+|+.+.. ..+|+|++.++.+++++|.
T Consensus 1 Mm~i~~e~v~~iA~LArL~l~eeE~~~~~~~l~~Il~~ve~L~evDt~~VeP~~~~~~~~-~~lReD~v~~~~~~e~~L~ 79 (100)
T 3ip4_C 1 MTKVTREEVEHIANLARLQISPEETEEMANTLESILDFAKQNDSADTEGVEPTYHVLDLQ-NVLREDKAIKGIPQELALK 79 (100)
T ss_dssp --CCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHGGGGGSCCTTCCCCSCCSCCC-CCCBCSCCCCCCCHHHHHT
T ss_pred CCCCCHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccccc-CCCCCCCCCCCCCHHHHHH
Confidence 689999999999999999999999999999999999999999999999999999998764 3599999999999999999
Q ss_pred hh
Q 031606 135 QL 136 (156)
Q Consensus 135 ~~ 136 (156)
||
T Consensus 80 nA 81 (100)
T 3ip4_C 80 NA 81 (100)
T ss_dssp TC
T ss_pred cC
Confidence 97
No 2
>3h0l_C Glutamyl-tRNA(Gln) amidotransferase subunit C; multi protein complex, ligase, protein biosynthesis; HET: ADP; 2.30A {Aquifex aeolicus} PDB: 3h0m_C 3h0r_C*
Probab=99.89 E-value=3.6e-23 Score=149.90 Aligned_cols=78 Identities=19% Similarity=0.350 Sum_probs=74.4
Q ss_pred CCChhHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCcccccCCCCCCCCCCcccCCCChHHHHHhh
Q 031606 57 SLEPPDVPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRAGSKREKNTLCYYPRICAGGTSLIIQL 136 (156)
Q Consensus 57 ~I~kEeVkkIA~LARL~LsEEEle~~~~qLn~ILe~~d~L~eVDTegVEPm~r~dev~~s~~ReDep~~~~~~~~LL~~~ 136 (156)
+||+++|+|||+||||+|+++|++.|.++|++|++||++|++|||+||+||+|+.+. ..+|+|++.++.+++++|.||
T Consensus 1 ~i~~e~v~~iA~LArL~l~eee~~~~~~~l~~Il~~ve~L~evDt~~VeP~~~~~~~--~~lReD~v~~~~~~e~~L~nA 78 (94)
T 3h0l_C 1 MVDREWVLKIAKLARLELKEEEIEVFQKQLSDILDFIDQLKELDTENVEPYIQEFEE--TPMREDEPHPSLDREKALMNA 78 (94)
T ss_dssp -CCHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTTGGGSCCTTCCCCCCCCSS--CCCBCSCCCCCCCHHHHHTTC
T ss_pred CCCHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCcCcccCcccc--cCCCCCCCCCCCCHHHHHHcC
Confidence 489999999999999999999999999999999999999999999999999999876 569999999999999999997
No 3
>3kfu_G Glutamyl-tRNA(Gln) amidotransferase subunit C; ASPRS, gatcab, ATP-binding, aminoacyl-tRNA synthetase, ligas nucleotide-binding, protein biosynthesis, ligase-RNA comple; HET: H2U 5MU PSU; 3.00A {Thermus thermophilus}
Probab=99.86 E-value=9.8e-22 Score=142.19 Aligned_cols=74 Identities=18% Similarity=0.246 Sum_probs=69.6
Q ss_pred CCCChhHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCcccccCCCCCCCCCCcccCCCChHHHHHh
Q 031606 56 SSLEPPDVPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRAGSKREKNTLCYYPRICAGGTSLIIQ 135 (156)
Q Consensus 56 m~I~kEeVkkIA~LARL~LsEEEle~~~~qLn~ILe~~d~L~eVDTegVEPm~r~dev~~s~~ReDep~~~~~~~~LL~~ 135 (156)
|+||+++|+|||+||||+|+++|++.+.++|++||+||++|++|||+||+| ....+|+|++.++.+++++|.|
T Consensus 4 M~i~~e~V~~iA~LArL~l~eeE~~~~~~~l~~Il~~ve~L~evDt~~VeP-------~~~~lReD~v~~~~~~e~~L~n 76 (92)
T 3kfu_G 4 MELSPELLRKLETLAKIRLSPEEEALLLQDLKRILDFVDALPRVEEGGAEE-------ALGRLREDEPRPSLPQAEALAL 76 (92)
T ss_dssp -CCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTCCCCCCCCCCC-------CCCCCBCSCCCCCCCHHHHHTT
T ss_pred CccCHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC-------CcCCCCCCCCCCCCCHHHHHHc
Confidence 789999999999999999999999999999999999999999999999999 2345999999999999999998
Q ss_pred h
Q 031606 136 L 136 (156)
Q Consensus 136 ~ 136 (156)
|
T Consensus 77 A 77 (92)
T 3kfu_G 77 A 77 (92)
T ss_dssp C
T ss_pred C
Confidence 7
No 4
>3al0_C Glutamyl-tRNA(Gln) amidotransferase subunit C, GL tRNA synthetase 2; protein-RNA complex, ligase-RNA complex; HET: GSU; 3.37A {Thermotoga maritima}
Probab=99.75 E-value=6.8e-19 Score=161.17 Aligned_cols=82 Identities=17% Similarity=0.235 Sum_probs=76.3
Q ss_pred CCCCChhHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCcccccCCCCCCCCCCcccCCCChHHHHH
Q 031606 55 RSSLEPPDVPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPALRAGSKREKNTLCYYPRICAGGTSLII 134 (156)
Q Consensus 55 ~m~I~kEeVkkIA~LARL~LsEEEle~~~~qLn~ILe~~d~L~eVDTegVEPm~r~dev~~s~~ReDep~~~~~~~~LL~ 134 (156)
||+||+++|+|||+||||+|+|+|++.+.+||++||+||++|++|||+|||||.|+.+..+ .+|+|++.++.+++++|.
T Consensus 2 ~m~i~~e~v~~iA~LArL~l~eee~~~~~~~l~~Il~~ve~L~evDt~~Vep~~~~~~~~~-~lReD~v~~~~~~e~~L~ 80 (592)
T 3al0_C 2 GIKVTKDLVLHLENLARLELSEDQRESLMKDFQEILDYVELLNEVDVEGVEPMYTPVEDSA-KLRKGDPRFFEMRDLIKK 80 (592)
T ss_dssp --CCCSTHHHHHHTTTTCCCCSSSHHHHHHHHHHHHHHHTTTCSSCCSSCCCCSCCSCSCC-CCBCCCCCCCTTHHHHHT
T ss_pred CCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHcccCCCCCCcCcccccccc-cCCCCcCCCCCCHHHHHh
Confidence 5889999999999999999999999999999999999999999999999999999987654 599999999999999999
Q ss_pred hhh
Q 031606 135 QLF 137 (156)
Q Consensus 135 ~~f 137 (156)
||=
T Consensus 81 nAP 83 (592)
T 3al0_C 81 NFP 83 (592)
T ss_dssp TCS
T ss_pred cCc
Confidence 974
No 5
>2rod_B NOXA, noxaa; MCL-1, apoptosis, BH3-only, BCL-2, cytoplasm, developmental protein, differentiation, membrane, mitochondrion, nucleus, phosphoprotein; NMR {Mus musculus}
Probab=72.84 E-value=0.26 Score=28.04 Aligned_cols=13 Identities=46% Similarity=1.160 Sum_probs=10.1
Q ss_pred eeeeeeeecCCCc
Q 031606 141 SVRVYCKWNASGM 153 (156)
Q Consensus 141 ~~~~~~~~~~~~~ 153 (156)
.-.|||.|.|..|
T Consensus 15 gdkvyctwsapdm 27 (27)
T 2rod_B 15 GDKVYCTWSAPDM 27 (27)
T ss_dssp HHHHHHHHHSCCC
T ss_pred CCeeEEeecCCCC
Confidence 4468999998765
No 6
>1taf_B TFIID TBP associated factor 62; transcription initiation, histone fold, complex (TWO transcr factors); 2.00A {Drosophila melanogaster} SCOP: a.22.1.3
Probab=44.83 E-value=68 Score=21.51 Aligned_cols=41 Identities=17% Similarity=0.237 Sum_probs=35.3
Q ss_pred CCCCCChhHHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHH
Q 031606 54 TRSSLEPPDVPRLAQTARI-SLTPHEVEEFAPKIRQVIDWFG 94 (156)
Q Consensus 54 ~~m~I~kEeVkkIA~LARL-~LsEEEle~~~~qLn~ILe~~d 94 (156)
.|+.+..+.|+.+|+-+-+ .++|+-...+.++++..+.-+-
T Consensus 3 ~~s~lp~~~v~~iaes~Gi~~lsddaa~~LA~dvEyr~~eI~ 44 (70)
T 1taf_B 3 YGSSISAESMKVIAESIGVGSLSDDAAKELAEDVSIKLKRIV 44 (70)
T ss_dssp CSCCCCHHHHHHHHHHTTCCCBCHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3568999999999999999 8999999999999887766553
No 7
>1h8b_A ACT-EF34, alpha-actinin 2, skeletal muscle isoform; structural protein, Z-DISK structural complex; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=43.25 E-value=15 Score=24.37 Aligned_cols=27 Identities=11% Similarity=0.310 Sum_probs=22.5
Q ss_pred CCCCCCCChhHHHHHHHHcCCCCCHHHHHHHHHH
Q 031606 52 TTTRSSLEPPDVPRLAQTARISLTPHEVEEFAPK 85 (156)
Q Consensus 52 ~~~~m~I~kEeVkkIA~LARL~LsEEEle~~~~q 85 (156)
+..+..|+.+++++ .|+++|++.+.++
T Consensus 20 ~dg~G~It~~eLr~-------~lt~eevd~~i~~ 46 (75)
T 1h8b_A 20 ASDKPYILAEELRR-------ELPPDQAQYCIKR 46 (75)
T ss_dssp TTSCSSBCHHHHHH-------HSCHHHHHHHHHH
T ss_pred hcCCCCcCHHHHHh-------cCCHHHHHHHHHh
Confidence 45567799999999 5999999988766
No 8
>3a1k_A Amidase; AS family enzyme, hydrolase; 2.17A {Rhodococcus SP} PDB: 3a1i_A
Probab=42.11 E-value=26 Score=31.02 Aligned_cols=45 Identities=11% Similarity=0.121 Sum_probs=39.9
Q ss_pred CCCChhHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHhccCC
Q 031606 56 SSLEPPDVPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVD 100 (156)
Q Consensus 56 m~I~kEeVkkIA~LARL~LsEEEle~~~~qLn~ILe~~d~L~eVD 100 (156)
..+|+++++..+....+.|.++|++.+.+-++..++-++.++++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 48 (521)
T 3a1k_A 4 IRPDDKAIDAAARHYGITLDKTARLEWPALIDGALGSYDVVDQLY 48 (521)
T ss_dssp CCCCHHHHHHHHHHTTCCCCTTHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHhhh
Confidence 358999999999999999999999999999998888888777654
No 9
>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}
Probab=41.28 E-value=30 Score=23.42 Aligned_cols=32 Identities=6% Similarity=0.044 Sum_probs=25.7
Q ss_pred CCCCCChhHHHHHHHHcCCCCCHHHHHHHHHH
Q 031606 54 TRSSLEPPDVPRLAQTARISLTPHEVEEFAPK 85 (156)
Q Consensus 54 ~~m~I~kEeVkkIA~LARL~LsEEEle~~~~q 85 (156)
+.-.|+.+|++.+.+-.-+.++++|++.+..+
T Consensus 49 ~~G~I~~~El~~~l~~lg~~~~~~ei~~l~~~ 80 (100)
T 2lv7_A 49 GNGFISKQELGTAMRSLGYMPNEVELEVIIQR 80 (100)
T ss_dssp CSSCBCHHHHHHHHHHHTCCCCTTTHHHHHHH
T ss_pred CCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 44579999999998888889999988776544
No 10
>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5
Probab=40.13 E-value=44 Score=19.23 Aligned_cols=32 Identities=13% Similarity=0.160 Sum_probs=24.8
Q ss_pred CCCCCChhHHHHHHHHcCCCCCHHHHHHHHHH
Q 031606 54 TRSSLEPPDVPRLAQTARISLTPHEVEEFAPK 85 (156)
Q Consensus 54 ~~m~I~kEeVkkIA~LARL~LsEEEle~~~~q 85 (156)
+...|+.+++..+..-....+++++++.+...
T Consensus 14 ~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~ 45 (67)
T 1tiz_A 14 KDGKLSLDEFREVALAFSPYFTQEDIVKFFEE 45 (67)
T ss_dssp SSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHH
T ss_pred CCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 34579999999998887888998887665443
No 11
>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}
Probab=38.70 E-value=48 Score=24.05 Aligned_cols=32 Identities=13% Similarity=0.219 Sum_probs=26.4
Q ss_pred CCCCCChhHHHHHHHHcCCCCCHHHHHHHHHH
Q 031606 54 TRSSLEPPDVPRLAQTARISLTPHEVEEFAPK 85 (156)
Q Consensus 54 ~~m~I~kEeVkkIA~LARL~LsEEEle~~~~q 85 (156)
+.-.|+.++++++..-....++++|++.+..+
T Consensus 97 ~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~ 128 (176)
T 2lhi_A 97 GDGLISAAELKHVLTSIGEKLTDAEVDDMLRE 128 (176)
T ss_dssp CSSSBCHHHHHHHHHTTTCCCCHHHHHHHHHH
T ss_pred CCCcCcHHHHHHHHHHcCcccchHHHHHHHHh
Confidence 44579999999999888889999998776544
No 12
>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}
Probab=37.70 E-value=49 Score=20.64 Aligned_cols=31 Identities=16% Similarity=0.233 Sum_probs=25.2
Q ss_pred CCCCChhHHHHHHHHcCCCCCHHHHHHHHHH
Q 031606 55 RSSLEPPDVPRLAQTARISLTPHEVEEFAPK 85 (156)
Q Consensus 55 ~m~I~kEeVkkIA~LARL~LsEEEle~~~~q 85 (156)
...|+.++++.+..-....+++++++.+...
T Consensus 23 ~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~ 53 (92)
T 2kn2_A 23 NGYISASELRHVMINLGEKLTDEEVEQMIKE 53 (92)
T ss_dssp SSEECHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred CCeEcHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 3579999999999888888999988766544
No 13
>3deu_A Transcriptional regulator SLYA; MARR, WING-helix, transcription regulator, activator, DNA-binding, repressor; HET: SAL; 2.30A {Salmonella typhimurium} SCOP: a.4.5.28
Probab=36.96 E-value=34 Score=24.64 Aligned_cols=28 Identities=18% Similarity=0.239 Sum_probs=22.9
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHhccCC
Q 031606 73 SLTPHEVEEFAPKIRQVIDWFGQLQDVD 100 (156)
Q Consensus 73 ~LsEEEle~~~~qLn~ILe~~d~L~eVD 100 (156)
.++++|.+.+..-|..|.+.++.+.+-|
T Consensus 139 ~l~~~e~~~l~~~L~~l~~~l~~~~~~d 166 (166)
T 3deu_A 139 GISSEEIELLIKLIAKLEHNIMELHSHD 166 (166)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHC----
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 7999999999999999999999887643
No 14
>3o0r_C Nitric oxide reductase subunit C; oxidoreductase, electron transport, heme, iron, membrane, CY membrane; HET: HEM HEC; 2.70A {Pseudomonas aeruginosa}
Probab=36.50 E-value=29 Score=24.34 Aligned_cols=22 Identities=9% Similarity=0.342 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHhccCCCCCCCC
Q 031606 85 KIRQVIDWFGQLQDVDLDSVDP 106 (156)
Q Consensus 85 qLn~ILe~~d~L~eVDTegVEP 106 (156)
|+.+|++|+..+..+++.+-+|
T Consensus 121 ei~~l~ayl~~l~~~~~~~wP~ 142 (146)
T 3o0r_C 121 QVDDLAEFLKWSSKIDTNQWPP 142 (146)
T ss_dssp HHHHHHHHHHHHTTSCCSSCSS
T ss_pred HHHHHHHHHHHhccCccCCCCC
Confidence 3677889999999999887665
No 15
>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=35.36 E-value=44 Score=20.55 Aligned_cols=32 Identities=6% Similarity=0.114 Sum_probs=25.4
Q ss_pred CCCCCChhHHHHHHHHcCCCCCHHHHHHHHHH
Q 031606 54 TRSSLEPPDVPRLAQTARISLTPHEVEEFAPK 85 (156)
Q Consensus 54 ~~m~I~kEeVkkIA~LARL~LsEEEle~~~~q 85 (156)
+...|+.++++.+..-....+++++++.+...
T Consensus 36 ~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~ 67 (87)
T 1s6j_A 36 NSGTITFDELKDGLKRVGSELMESEIKDLMDA 67 (87)
T ss_dssp CSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHH
T ss_pred CCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 44679999999998888888999887665544
No 16
>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A
Probab=35.28 E-value=66 Score=23.02 Aligned_cols=31 Identities=10% Similarity=0.147 Sum_probs=23.1
Q ss_pred CCCChhHHHHHHHHcCCCCCHHHHHHHHHHHHH
Q 031606 56 SSLEPPDVPRLAQTARISLTPHEVEEFAPKIRQ 88 (156)
Q Consensus 56 m~I~kEeVkkIA~LARL~LsEEEle~~~~qLn~ 88 (156)
..|+++++..+.+-. .++++++..+-..+..
T Consensus 14 g~l~~~el~~~~~~~--~~~~~~i~~~f~~~d~ 44 (207)
T 2d8n_A 14 GALSKEILEELQLNT--KFSEEELCSWYQSFLK 44 (207)
T ss_dssp TCCCHHHHHHHHHHS--SCCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHc--CCCHHHHHHHHHHHHh
Confidence 368999999988764 4688888887766543
No 17
>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A
Probab=35.08 E-value=58 Score=20.36 Aligned_cols=32 Identities=6% Similarity=0.125 Sum_probs=25.4
Q ss_pred CCCCCChhHHHHHHHHcCCCCCHHHHHHHHHH
Q 031606 54 TRSSLEPPDVPRLAQTARISLTPHEVEEFAPK 85 (156)
Q Consensus 54 ~~m~I~kEeVkkIA~LARL~LsEEEle~~~~q 85 (156)
+...|+.+++..+..-....+++++++.+...
T Consensus 33 ~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~ 64 (90)
T 1avs_A 33 GGGDISTKELGTVMRMLGQNPTKEELDAIIEE 64 (90)
T ss_dssp CSSEECHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred CCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 34579999999998888888999888776543
No 18
>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}
Probab=34.41 E-value=72 Score=20.61 Aligned_cols=32 Identities=16% Similarity=0.240 Sum_probs=24.9
Q ss_pred CCCCCChhHHHHHHHHcCCCCCHHHHHHHHHH
Q 031606 54 TRSSLEPPDVPRLAQTARISLTPHEVEEFAPK 85 (156)
Q Consensus 54 ~~m~I~kEeVkkIA~LARL~LsEEEle~~~~q 85 (156)
+.-.|+.++++.+..-....+++++++.+...
T Consensus 42 ~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~ 73 (94)
T 2kz2_A 42 GNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 73 (94)
T ss_dssp CCSCBCHHHHHHHHHHHTCCCCHHHHHHHHHH
T ss_pred CcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 33579999999998877888999887765543
No 19
>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C
Probab=32.17 E-value=38 Score=24.23 Aligned_cols=32 Identities=3% Similarity=0.106 Sum_probs=26.2
Q ss_pred CCCCCChhHHHHHHHHcCCCCCHHHHHHHHHH
Q 031606 54 TRSSLEPPDVPRLAQTARISLTPHEVEEFAPK 85 (156)
Q Consensus 54 ~~m~I~kEeVkkIA~LARL~LsEEEle~~~~q 85 (156)
+.-.|+.++++++..-.-..++++|++.+...
T Consensus 98 ~~G~I~~~el~~~l~~~g~~ls~~e~~~l~~~ 129 (159)
T 3i5g_C 98 GQGLISSAEIRNVLKMLGERITEDQCNDIFTF 129 (159)
T ss_dssp SSSEECHHHHHHHHHHSSSCCCHHHHHHHHHH
T ss_pred CCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 44579999999999888889999998876543
No 20
>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A
Probab=31.31 E-value=89 Score=19.41 Aligned_cols=31 Identities=16% Similarity=0.279 Sum_probs=24.5
Q ss_pred CCChhHHHHHHHH-----cCCCCCHHHHHHHHHHHH
Q 031606 57 SLEPPDVPRLAQT-----ARISLTPHEVEEFAPKIR 87 (156)
Q Consensus 57 ~I~kEeVkkIA~L-----ARL~LsEEEle~~~~qLn 87 (156)
.|+.++++.+..- ....+++++++.+...++
T Consensus 27 ~I~~~el~~~l~~~~~~~~g~~~~~~~~~~~~~~~D 62 (93)
T 1k2h_A 27 KLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELD 62 (93)
T ss_dssp SCCHHHHHHHHHHHTHHHHHCCCCHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhC
Confidence 7999999998875 567889998887766543
No 21
>3a1y_A 50S ribosomal protein P1 (L12P); stalk, helix SPIN, ribonucleoprotein; 2.13A {Pyrococcus horikoshii}
Probab=30.78 E-value=88 Score=20.00 Aligned_cols=32 Identities=6% Similarity=0.216 Sum_probs=29.0
Q ss_pred CCCChhHHHHHHHHcCCCCCHHHHHHHHHHHH
Q 031606 56 SSLEPPDVPRLAQTARISLTPHEVEEFAPKIR 87 (156)
Q Consensus 56 m~I~kEeVkkIA~LARL~LsEEEle~~~~qLn 87 (156)
..+|.+++++|-+-+-++.+++-...|.+.|+
T Consensus 15 ~~~t~~~I~~il~aaGveve~~~~~~~~~~L~ 46 (58)
T 3a1y_A 15 KEINEENLKAVLQAAGVEPEEARIKALVAALE 46 (58)
T ss_dssp CCCCHHHHHHHHHHTTCCCCHHHHHHHHHHHS
T ss_pred CCCCHHHHHHHHHHcCCCccHHHHHHHHHHHC
Confidence 37899999999999999999999999998773
No 22
>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...
Probab=30.74 E-value=88 Score=21.01 Aligned_cols=32 Identities=16% Similarity=0.238 Sum_probs=25.6
Q ss_pred CCCCCChhHHHHHHHHcCCCCCHHHHHHHHHH
Q 031606 54 TRSSLEPPDVPRLAQTARISLTPHEVEEFAPK 85 (156)
Q Consensus 54 ~~m~I~kEeVkkIA~LARL~LsEEEle~~~~q 85 (156)
..-.|+.++++++..-....+++++++.+...
T Consensus 96 ~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~ 127 (148)
T 1exr_A 96 GNGLISAAELRHVMTNLGEKLTDDEVDEMIRE 127 (148)
T ss_dssp CSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred CCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 34579999999998877788999988776554
No 23
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A
Probab=29.77 E-value=74 Score=20.85 Aligned_cols=33 Identities=15% Similarity=0.252 Sum_probs=26.5
Q ss_pred CCCCCChhHHHHHHHHcCCCCCHHHHHHHHHHH
Q 031606 54 TRSSLEPPDVPRLAQTARISLTPHEVEEFAPKI 86 (156)
Q Consensus 54 ~~m~I~kEeVkkIA~LARL~LsEEEle~~~~qL 86 (156)
+.-.|+.+++.++..-....+++++++.+...+
T Consensus 97 ~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~ 129 (147)
T 4ds7_A 97 GDGLISAAELKHVLTSIGEKLTDAEVDEMLREV 129 (147)
T ss_dssp CSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHH
T ss_pred CCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHh
Confidence 345799999999999888889999887766544
No 24
>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}
Probab=28.94 E-value=49 Score=19.78 Aligned_cols=31 Identities=10% Similarity=0.157 Sum_probs=24.2
Q ss_pred CCCCChhHHHHHHHHcCCCCCHHHHHHHHHH
Q 031606 55 RSSLEPPDVPRLAQTARISLTPHEVEEFAPK 85 (156)
Q Consensus 55 ~m~I~kEeVkkIA~LARL~LsEEEle~~~~q 85 (156)
...|+.+++..+..-....+++++++.+...
T Consensus 21 ~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~ 51 (77)
T 2joj_A 21 TGSIDYHELKVAMRALGFDVKKPEILELMNE 51 (77)
T ss_dssp SSEEEHHHHHHHHHHHTCCCHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 3568999999998888888888887765443
No 25
>2lbf_B 60S acidic ribosomal protein P2; ribosome, stalk, P1/P2; NMR {Homo sapiens} PDB: 2w1o_A
Probab=28.90 E-value=50 Score=22.19 Aligned_cols=32 Identities=13% Similarity=0.273 Sum_probs=28.9
Q ss_pred CCCChhHHHHHHHHcCCCCCHHHHHHHHHHHH
Q 031606 56 SSLEPPDVPRLAQTARISLTPHEVEEFAPKIR 87 (156)
Q Consensus 56 m~I~kEeVkkIA~LARL~LsEEEle~~~~qLn 87 (156)
..+|.++|++|-+-+-++.+++-.+.|.+.|+
T Consensus 17 ~~~ta~~I~~il~aaGvevd~~~~~~~~~aL~ 48 (70)
T 2lbf_B 17 SSPSAKDIKKILDSVGIEADDDRLNKVISELN 48 (70)
T ss_dssp SSCCHHHHHHHHHTTTCCCCTTHHHHHHHHHS
T ss_pred CCCCHHHHHHHHHHcCCCccHHHHHHHHHHHc
Confidence 36899999999999999999999999988773
No 26
>2ktg_A Calmodulin, putative; ehcam, Ca-binding protein, partially structured protein, CAM-like; NMR {Entamoeba histolytica} PDB: 2lc5_A
Probab=28.73 E-value=57 Score=19.95 Aligned_cols=32 Identities=9% Similarity=0.183 Sum_probs=25.3
Q ss_pred CCCCChhHHHHHHHHcCCCCCHHHHHHHHHHH
Q 031606 55 RSSLEPPDVPRLAQTARISLTPHEVEEFAPKI 86 (156)
Q Consensus 55 ~m~I~kEeVkkIA~LARL~LsEEEle~~~~qL 86 (156)
...|+.+++..+..-....+++++++.+...+
T Consensus 28 ~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~ 59 (85)
T 2ktg_A 28 DNKLTAEELGTVMRALGANPTKQKISEIVKDY 59 (85)
T ss_dssp CSEEEHHHHHHHHHTTSSCCCHHHHHHHHHHH
T ss_pred CCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHh
Confidence 35699999999988777889998887766543
No 27
>2e9x_A DNA replication complex GINS protein PSF1; eukaryotic DNA replication; HET: DNA; 2.30A {Homo sapiens} SCOP: a.278.1.1 PDB: 2eho_B*
Probab=28.23 E-value=87 Score=23.12 Aligned_cols=32 Identities=19% Similarity=0.360 Sum_probs=25.3
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhcc---CCCCC
Q 031606 72 ISLTPHEVEEFAPKIRQVIDWFGQLQD---VDLDS 103 (156)
Q Consensus 72 L~LsEEEle~~~~qLn~ILe~~d~L~e---VDTeg 103 (156)
=.|+++|.+-+.+--+-+-+|+..+.+ +|+++
T Consensus 104 ~~LS~~E~~f~~~Y~~lL~~y~~~~~~~~~ldlt~ 138 (149)
T 2e9x_A 104 FHMAAEEMEWFNNYKRSLATYMRSLGGDEGLDITQ 138 (149)
T ss_dssp HTSCHHHHHHHHHHHHHHHHHHHHSSSSSCCCTTS
T ss_pred hcCCHHHHHHHHHHHHHHHHHHHhcCcccccCCCC
Confidence 367889998888888888889998874 67665
No 28
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A
Probab=27.85 E-value=1.1e+02 Score=20.83 Aligned_cols=32 Identities=22% Similarity=0.345 Sum_probs=25.7
Q ss_pred CCCCCChhHHHHHHHHcCCCCCHHHHHHHHHH
Q 031606 54 TRSSLEPPDVPRLAQTARISLTPHEVEEFAPK 85 (156)
Q Consensus 54 ~~m~I~kEeVkkIA~LARL~LsEEEle~~~~q 85 (156)
+.-.|+.+++.++..-....+++++++.+...
T Consensus 114 ~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~ 145 (169)
T 3qrx_A 114 NSGTITIKDLRRVAKELGENLTEEELQEMIAE 145 (169)
T ss_dssp CSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred CCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHH
Confidence 44579999999999888888999988766444
No 29
>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B
Probab=27.22 E-value=55 Score=23.19 Aligned_cols=31 Identities=6% Similarity=0.063 Sum_probs=24.8
Q ss_pred CCCCCChhHHHHHHHHcCCCCCHHHHHHHHH
Q 031606 54 TRSSLEPPDVPRLAQTARISLTPHEVEEFAP 84 (156)
Q Consensus 54 ~~m~I~kEeVkkIA~LARL~LsEEEle~~~~ 84 (156)
+.-.|+.++++++..-.-..++++|++.+..
T Consensus 98 ~~G~I~~~el~~~l~~~g~~ls~~ei~~~~~ 128 (153)
T 3i5g_B 98 GQGFIPEDYLKDLLENMGDNFSKEEIKNVWK 128 (153)
T ss_dssp CSSCCCHHHHHHHHHSSSSCCCHHHHHHHHT
T ss_pred CCCeEeHHHHHHHHHHcCCcCCHHHHHHHHH
Confidence 4457999999999876667899999877644
No 30
>4aik_A Transcriptional regulator SLYA; transcription, transcription factor; 1.85A {Yersinia pseudotuberculosis} PDB: 4aih_A 4aij_A 3qpt_A* 3q5f_A*
Probab=27.04 E-value=63 Score=23.00 Aligned_cols=27 Identities=19% Similarity=0.154 Sum_probs=22.9
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhcc
Q 031606 72 ISLTPHEVEEFAPKIRQVIDWFGQLQD 98 (156)
Q Consensus 72 L~LsEEEle~~~~qLn~ILe~~d~L~e 98 (156)
=.++++|.+.+..-|+.|.+-++++++
T Consensus 116 ~~l~~ee~~~l~~~L~kl~~nl~~l~~ 142 (151)
T 4aik_A 116 GGISSDEIAVLSGLIDKLEKNIIQLQT 142 (151)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 368999999999999999998887653
No 31
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_B 2ekw_B 2oy6_B* 3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Probab=26.98 E-value=88 Score=20.99 Aligned_cols=33 Identities=6% Similarity=0.056 Sum_probs=26.6
Q ss_pred CCCCCChhHHHHHHHHcCCCCCHHHHHHHHHHH
Q 031606 54 TRSSLEPPDVPRLAQTARISLTPHEVEEFAPKI 86 (156)
Q Consensus 54 ~~m~I~kEeVkkIA~LARL~LsEEEle~~~~qL 86 (156)
+.-.|+.++++++..-....+++++++.+...+
T Consensus 98 ~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~ 130 (153)
T 2ovk_B 98 GQGFIPEDYLKDLLENMGDNFSKEEIKNVWKDA 130 (153)
T ss_dssp CSSCCCHHHHHHHHHHSSSCCCHHHHHHHHHHC
T ss_pred CCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHc
Confidence 345799999999998888889999887765543
No 32
>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...
Probab=26.74 E-value=1.1e+02 Score=19.73 Aligned_cols=31 Identities=10% Similarity=0.147 Sum_probs=24.2
Q ss_pred CCCChhHHHHHHHH-----cCCCCCHHHHHHHHHHH
Q 031606 56 SSLEPPDVPRLAQT-----ARISLTPHEVEEFAPKI 86 (156)
Q Consensus 56 m~I~kEeVkkIA~L-----ARL~LsEEEle~~~~qL 86 (156)
-.|+.++++++-.- -...+++++++.+.+++
T Consensus 26 g~Is~~EL~~~l~~~~~~~lg~~~~~~~v~~~~~~~ 61 (92)
T 3rm1_A 26 HKLKKSELKELINNELSHFLEEIKEQEVVDKVMETL 61 (92)
T ss_dssp TSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHH
T ss_pred CeECHHHHHHHHHHHhhhhccCcccHHHHHHHHHHH
Confidence 47999999998876 55678888888776654
No 33
>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}
Probab=26.66 E-value=40 Score=19.76 Aligned_cols=30 Identities=10% Similarity=0.155 Sum_probs=23.0
Q ss_pred CCCCChhHHHHHHHHcCCCCCHHHHHHHHH
Q 031606 55 RSSLEPPDVPRLAQTARISLTPHEVEEFAP 84 (156)
Q Consensus 55 ~m~I~kEeVkkIA~LARL~LsEEEle~~~~ 84 (156)
...|+.+++..+..-....+++++++.+..
T Consensus 20 ~G~i~~~el~~~l~~~~~~~~~~~~~~~~~ 49 (71)
T 2b1u_A 20 DGHITVDELRRAMAGLGQPLPQEELDAMIR 49 (71)
T ss_dssp SSEEEHHHHHHHGGGTTCSSCHHHHHHHHH
T ss_pred CCcCcHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence 356999999998887777888887665443
No 34
>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A
Probab=26.44 E-value=1.2e+02 Score=20.43 Aligned_cols=32 Identities=19% Similarity=0.280 Sum_probs=24.7
Q ss_pred CCCCCChhHHHHHHHHcCCCCCHHHHHHHHHH
Q 031606 54 TRSSLEPPDVPRLAQTARISLTPHEVEEFAPK 85 (156)
Q Consensus 54 ~~m~I~kEeVkkIA~LARL~LsEEEle~~~~q 85 (156)
+.-.|+.++++++..-.-..+++++++.+..+
T Consensus 92 ~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~ 123 (143)
T 2obh_A 92 ETGKISFKNLKRVAKELGENLTDEELQEMIDE 123 (143)
T ss_dssp CSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred CCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 33579999999998766677899988877544
No 35
>4gyt_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, predicted legionella effector; 2.05A {Legionella pneumophila subsp}
Probab=26.18 E-value=49 Score=25.28 Aligned_cols=36 Identities=14% Similarity=0.127 Sum_probs=26.4
Q ss_pred ChhHHHHHHHHcCCCCCH-HHHHHHHHHHHHHHHHHH
Q 031606 59 EPPDVPRLAQTARISLTP-HEVEEFAPKIRQVIDWFG 94 (156)
Q Consensus 59 ~kEeVkkIA~LARL~LsE-EEle~~~~qLn~ILe~~d 94 (156)
.+|-++-++.+|+++.++ ++-+.-...+.+|++|+.
T Consensus 134 ~~E~l~dl~~Ia~l~~d~~dd~ee~E~~~~El~EyvR 170 (194)
T 4gyt_A 134 SQDALQHLMEFAELDCESLEVGEEDERALMEVSEYTR 170 (194)
T ss_dssp HHHHHHHHHHHTTCCTTTCCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCcccCcCcccHHHHHHHHHHHH
Confidence 356677788999998764 334556778889999875
No 36
>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A
Probab=26.15 E-value=86 Score=21.40 Aligned_cols=32 Identities=13% Similarity=0.215 Sum_probs=25.7
Q ss_pred CCCCCChhHHHHHHHHcCCCCCHHHHHHHHHH
Q 031606 54 TRSSLEPPDVPRLAQTARISLTPHEVEEFAPK 85 (156)
Q Consensus 54 ~~m~I~kEeVkkIA~LARL~LsEEEle~~~~q 85 (156)
+.-.|+.++++++..-.-..++++|++.+..+
T Consensus 96 ~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~ 127 (148)
T 2lmt_A 96 GDGFISPAELRFVMINLGEKVTDEEIDEMIRE 127 (148)
T ss_dssp CSSEECHHHHHHHHHHHTCCCCHHHHHHHHHH
T ss_pred CcCcCcHHHHHHHHHHcCccccHHHHHHHHHH
Confidence 44579999999998888889999988776544
No 37
>3bpv_A Transcriptional regulator; MARR, DNA binding, transcription factor, winged helix motif, DNA-binding; 1.40A {Methanobacterium thermoautotrophicum} PDB: 3bpx_A*
Probab=26.06 E-value=1.5e+02 Score=19.70 Aligned_cols=26 Identities=15% Similarity=0.091 Sum_probs=22.4
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHh
Q 031606 71 RISLTPHEVEEFAPKIRQVIDWFGQL 96 (156)
Q Consensus 71 RL~LsEEEle~~~~qLn~ILe~~d~L 96 (156)
-=.++++|.+.+..-|..+.+.++.+
T Consensus 112 ~~~l~~~e~~~l~~~l~~~~~~l~~~ 137 (138)
T 3bpv_A 112 FRDFTEDERKLFRKMCRRLAEEAVRM 137 (138)
T ss_dssp TTTSCHHHHHHHHHHHHHHHHHHHHC
T ss_pred HhcCCHHHHHHHHHHHHHHHHHHHhc
Confidence 34799999999999999999888765
No 38
>4hbl_A Transcriptional regulator, MARR family; HTH, transcription factor, DNA binding; 2.50A {Staphylococcus epidermidis}
Probab=25.69 E-value=71 Score=22.08 Aligned_cols=27 Identities=11% Similarity=0.101 Sum_probs=23.7
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhcc
Q 031606 72 ISLTPHEVEEFAPKIRQVIDWFGQLQD 98 (156)
Q Consensus 72 L~LsEEEle~~~~qLn~ILe~~d~L~e 98 (156)
=.++++|.+.+..-|..+.+.++.+.+
T Consensus 122 ~~l~~~e~~~l~~~l~~l~~~l~~~~~ 148 (149)
T 4hbl_A 122 QEFDTTEYDETKYVFEELEQTLKHLIE 148 (149)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hhCCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 379999999999999999999887753
No 39
>2lbf_A 60S acidic ribosomal protein P1; ribosome, stalk, P1/P2; NMR {Homo sapiens}
Probab=25.64 E-value=58 Score=21.70 Aligned_cols=31 Identities=16% Similarity=0.265 Sum_probs=26.6
Q ss_pred CCCChhHHHHHHHHcCCCCCHHHHHHHHHHH
Q 031606 56 SSLEPPDVPRLAQTARISLTPHEVEEFAPKI 86 (156)
Q Consensus 56 m~I~kEeVkkIA~LARL~LsEEEle~~~~qL 86 (156)
..+|.++|++|-+-+-++.++.-...|.+.|
T Consensus 21 ~~~ta~~I~~il~AaGveve~~~~~lf~~aL 51 (69)
T 2lbf_A 21 VTVTEDKINALIKAAGVNVEPFWPGLFAKAL 51 (69)
T ss_dssp CCCCHHHHHHHHHHHTCCCCTHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHcCCCccHHHHHHHHHHH
Confidence 3689999999999999999999888887743
No 40
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}
Probab=25.41 E-value=65 Score=21.25 Aligned_cols=31 Identities=19% Similarity=0.188 Sum_probs=24.4
Q ss_pred CCCCCChhHHHHHHHHcCCCCCHHHHHHHHH
Q 031606 54 TRSSLEPPDVPRLAQTARISLTPHEVEEFAP 84 (156)
Q Consensus 54 ~~m~I~kEeVkkIA~LARL~LsEEEle~~~~ 84 (156)
+.-.|+.++++++..-....+++++++.+..
T Consensus 89 ~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~ 119 (143)
T 3j04_B 89 ASGFIHEDHLRELLTTMGDRFTDEEVDEMYR 119 (143)
T ss_dssp SCCCCCTTTHHHHHHTSSSCCCHHHHHHHHH
T ss_pred CCCeEcHHHHHHHHHHcCCCCCHHHHHHHHH
Confidence 3457999999999987778899988765543
No 41
>2fji_1 Exocyst complex component SEC6; exocytosis, tandem helical bundles, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=24.75 E-value=1.2e+02 Score=25.36 Aligned_cols=51 Identities=6% Similarity=0.092 Sum_probs=44.1
Q ss_pred CCCChhHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCc
Q 031606 56 SSLEPPDVPRLAQTARISLTPHEVEEFAPKIRQVIDWFGQLQDVDLDSVDPA 107 (156)
Q Consensus 56 m~I~kEeVkkIA~LARL~LsEEEle~~~~qLn~ILe~~d~L~eVDTegVEPm 107 (156)
..++.+.|+.|-. .|-+++.+++..+...+.+|..-=.+..++++++-+|+
T Consensus 337 pD~~~~~V~aiL~-~R~D~~~~~~k~ll~~~~~~~~~~~~~~~~~~~~~~~t 387 (399)
T 2fji_1 337 WDSRIDLLVGILK-CRKDVSSSERKKIVQQATEMLHEYRRNMEANGVDREPT 387 (399)
T ss_dssp TTCCSHHHHHHHT-TCTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred CCCCHHHHHHHHH-hccCCCHHHHHHHHHHHHHHHHhHHHHhhccccCCCCc
Confidence 3588999999885 67899999999999999999888888888888888876
No 42
>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5
Probab=24.75 E-value=71 Score=21.06 Aligned_cols=31 Identities=10% Similarity=0.150 Sum_probs=23.3
Q ss_pred CCCCCChhHHHHHHHHcCCCCCHHHHHHHHH
Q 031606 54 TRSSLEPPDVPRLAQTARISLTPHEVEEFAP 84 (156)
Q Consensus 54 ~~m~I~kEeVkkIA~LARL~LsEEEle~~~~ 84 (156)
+.-.|+.++++++..-....+++++++.+..
T Consensus 89 ~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~ 119 (140)
T 1ggw_A 89 ATGMIGVGELRYVLTSLGEKLSNEEMDELLK 119 (140)
T ss_dssp CSSCCCHHHHHHHHHHHHSCSCHHHHHHHHH
T ss_pred CCCcEeHHHHHHHHHHcCCCCCHHHHHHHHH
Confidence 3356999999998877677788888766544
No 43
>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=24.48 E-value=95 Score=20.37 Aligned_cols=32 Identities=19% Similarity=0.185 Sum_probs=24.6
Q ss_pred CCCCCChhHHHHHHHHcCCCCCHHHHHHHHHH
Q 031606 54 TRSSLEPPDVPRLAQTARISLTPHEVEEFAPK 85 (156)
Q Consensus 54 ~~m~I~kEeVkkIA~LARL~LsEEEle~~~~q 85 (156)
..-.|+.++++++..-....+++++++.+...
T Consensus 92 ~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~ 123 (142)
T 2bl0_C 92 GTGYIPKAALQDALLNLGDRLKPHEFAEFLGI 123 (142)
T ss_dssp SCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHH
T ss_pred CCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHH
Confidence 34579999999998877778899887665443
No 44
>3nrv_A Putative transcriptional regulator (MARR/EMRR FAM; PSI-2, protein structure initiati structural genomics; HET: MSE; 2.00A {Acinetobacter SP}
Probab=23.70 E-value=83 Score=21.43 Aligned_cols=25 Identities=8% Similarity=0.138 Sum_probs=21.8
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHh
Q 031606 72 ISLTPHEVEEFAPKIRQVIDWFGQL 96 (156)
Q Consensus 72 L~LsEEEle~~~~qLn~ILe~~d~L 96 (156)
=.++++|.+.+..-|..+.+.++.+
T Consensus 124 ~~l~~~e~~~l~~~l~~l~~~l~~l 148 (148)
T 3nrv_A 124 EEFEEAEKDQLFILLKKLRNKVDQM 148 (148)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred HcCCHHHHHHHHHHHHHHHHHhhcC
Confidence 4689999999999999999888754
No 45
>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7
Probab=23.40 E-value=67 Score=20.58 Aligned_cols=32 Identities=6% Similarity=0.132 Sum_probs=25.8
Q ss_pred CCCCCChhHHHHHHHHcCCCCCHHHHHHHHHH
Q 031606 54 TRSSLEPPDVPRLAQTARISLTPHEVEEFAPK 85 (156)
Q Consensus 54 ~~m~I~kEeVkkIA~LARL~LsEEEle~~~~q 85 (156)
+...|+.++++.+..-....++++|++.+...
T Consensus 37 ~~G~i~~~el~~~l~~~g~~~~~~e~~~l~~~ 68 (105)
T 1wlz_A 37 KTNTISREEFRAICNRRVQILTDEQFDRLWNE 68 (105)
T ss_dssp CSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTT
T ss_pred CCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 34579999999999888889999988766543
No 46
>3k0l_A Repressor protein; helix-turn-helix, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.35A {Acinetobacter SP}
Probab=23.35 E-value=84 Score=22.03 Aligned_cols=30 Identities=3% Similarity=0.029 Sum_probs=22.3
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHhccCC
Q 031606 71 RISLTPHEVEEFAPKIRQVIDWFGQLQDVD 100 (156)
Q Consensus 71 RL~LsEEEle~~~~qLn~ILe~~d~L~eVD 100 (156)
-=.++++|.+.+..-|..+.+.++.++..|
T Consensus 129 ~~~l~~~e~~~l~~~L~~l~~~l~~~~~~d 158 (162)
T 3k0l_A 129 LQGVDINLAFLIRNNLELMVKNLSTFSSLD 158 (162)
T ss_dssp TTTSCHHHHHHHHHHHHHHHHHTCC-----
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 347999999999999999999888776554
No 47
>2wuj_A Septum site-determining protein diviva; bacterial cell division, septation, cell cycle, sporulation; 1.40A {Bacillus subtilis} PDB: 2wuk_A
Probab=23.25 E-value=21 Score=22.83 Aligned_cols=36 Identities=25% Similarity=0.342 Sum_probs=19.3
Q ss_pred CCCChhHHHHHHHHc-CCCCCHHHHHHHHHHHHHHHH
Q 031606 56 SSLEPPDVPRLAQTA-RISLTPHEVEEFAPKIRQVID 91 (156)
Q Consensus 56 m~I~kEeVkkIA~LA-RL~LsEEEle~~~~qLn~ILe 91 (156)
|.+|+.+|.....-. .=..+++|++.|..++.+-++
T Consensus 1 M~lTp~dI~~k~F~~~~rGY~~~EVD~FLd~v~~~~~ 37 (57)
T 2wuj_A 1 MPLTPNDIHNKTFTKSFRGYDEDEVNEFLAQVRKDYE 37 (57)
T ss_dssp --CCHHHHTTCCCCEETTEEEHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHhhCcCCCCCCCcCHHHHHHHHHHHHHHHH
Confidence 455666655433222 226777888877776655443
No 48
>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A
Probab=22.94 E-value=1.5e+02 Score=20.14 Aligned_cols=32 Identities=9% Similarity=0.225 Sum_probs=25.9
Q ss_pred CCCCChhHHHHHHHHcCCCCCHHHHHHHHHHH
Q 031606 55 RSSLEPPDVPRLAQTARISLTPHEVEEFAPKI 86 (156)
Q Consensus 55 ~m~I~kEeVkkIA~LARL~LsEEEle~~~~qL 86 (156)
.-.|+.++++++..-....+++++++.+...+
T Consensus 84 ~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~ 115 (165)
T 1k94_A 84 SGTVEHHELRQAIGLMGYRLSPQTLTTIVKRY 115 (165)
T ss_dssp CSBCCHHHHHHHHHHTTCCCCHHHHHHHHHHH
T ss_pred CceECHHHHHHHHHHhCCCCCHHHHHHHHHHh
Confidence 35799999999888777889999888776653
No 49
>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4
Probab=22.83 E-value=1e+02 Score=19.68 Aligned_cols=32 Identities=9% Similarity=0.112 Sum_probs=24.7
Q ss_pred CCCCCChhHHHHHHHHc---CCCCCHHHHHHHHHH
Q 031606 54 TRSSLEPPDVPRLAQTA---RISLTPHEVEEFAPK 85 (156)
Q Consensus 54 ~~m~I~kEeVkkIA~LA---RL~LsEEEle~~~~q 85 (156)
+...|+.++++++.... ...+++++++.+...
T Consensus 54 ~~G~i~~~el~~~l~~~~~~g~~~~~~~~~~~~~~ 88 (109)
T 5pal_A 54 QSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAA 88 (109)
T ss_dssp CSSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHH
T ss_pred CCCcCcHHHHHHHHHHHHHcCCCCCHHHHHHHHHH
Confidence 33579999999988876 788999887766544
No 50
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Probab=22.59 E-value=1.4e+02 Score=20.25 Aligned_cols=33 Identities=18% Similarity=0.259 Sum_probs=25.1
Q ss_pred CCCCCChhHHHHHHHHcCCCCCHHHHHHHHHHH
Q 031606 54 TRSSLEPPDVPRLAQTARISLTPHEVEEFAPKI 86 (156)
Q Consensus 54 ~~m~I~kEeVkkIA~LARL~LsEEEle~~~~qL 86 (156)
+.-.|+.+++.++..-....+++++++.+...+
T Consensus 108 ~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~ 140 (166)
T 2mys_B 108 GKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAF 140 (166)
T ss_pred CCcceeHHHHHHHHHHcCCCCCHHHHHHHHHhc
Confidence 335699999999988777778998887765543
No 51
>3s2w_A Transcriptional regulator, MARR family; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 2.45A {Methanosarcina mazei}
Probab=22.30 E-value=94 Score=21.61 Aligned_cols=24 Identities=8% Similarity=0.090 Sum_probs=21.9
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHh
Q 031606 73 SLTPHEVEEFAPKIRQVIDWFGQL 96 (156)
Q Consensus 73 ~LsEEEle~~~~qLn~ILe~~d~L 96 (156)
.++++|.+.+..-|+.+.+-++.+
T Consensus 135 ~l~~~e~~~l~~~l~~l~~~l~~~ 158 (159)
T 3s2w_A 135 SFDDRQRREITNSLEIMFENGLKI 158 (159)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHHHHHHHHHHhc
Confidence 789999999999999999988765
No 52
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Probab=22.08 E-value=1.7e+02 Score=19.05 Aligned_cols=33 Identities=18% Similarity=0.146 Sum_probs=26.4
Q ss_pred CCCCCChhHHHHHHHHcCCCCCHHHHHHHHHHH
Q 031606 54 TRSSLEPPDVPRLAQTARISLTPHEVEEFAPKI 86 (156)
Q Consensus 54 ~~m~I~kEeVkkIA~LARL~LsEEEle~~~~qL 86 (156)
+.-.|+.+++.++..-..+.++++++..+...+
T Consensus 24 ~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~ 56 (153)
T 3ox6_A 24 KDGYINCRDLGNCMRTMGYMPTEMELIELSQQI 56 (153)
T ss_dssp CSSSCCHHHHHHHHHHTTCCCCHHHHHHHHHHH
T ss_pred CCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHh
Confidence 345799999999988888889999888776654
No 53
>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A
Probab=21.85 E-value=94 Score=20.65 Aligned_cols=32 Identities=16% Similarity=0.085 Sum_probs=26.3
Q ss_pred CCCCChhHHHHHHHHcCCCCCHHHHHHHHHHH
Q 031606 55 RSSLEPPDVPRLAQTARISLTPHEVEEFAPKI 86 (156)
Q Consensus 55 ~m~I~kEeVkkIA~LARL~LsEEEle~~~~qL 86 (156)
.-.|+.++++++..-....+++++++.+...+
T Consensus 98 ~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~ 129 (146)
T 2qac_A 98 TGYLTKSQMKNILTTWGDALTDQEAIDALNAF 129 (146)
T ss_dssp SSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHc
Confidence 34699999999988877889999988876654
No 54
>2veb_A Protoglobin; hemoprotein structure, protein matrix tunnels, methanogenesis, archaea protein, transport protein; HET: HEM; 1.30A {Methanosarcina acetivorans} PDB: 2vee_A* 3r0g_A* 3qzz_A* 3qzx_A*
Probab=21.59 E-value=93 Score=24.74 Aligned_cols=40 Identities=15% Similarity=0.193 Sum_probs=27.8
Q ss_pred CCCCc--cCCCCCCCChhHHHHHHHHcCCCCCHHHHHHHHHHHH
Q 031606 46 TRNCS--TTTTRSSLEPPDVPRLAQTARISLTPHEVEEFAPKIR 87 (156)
Q Consensus 46 ~~~~s--t~~~~m~I~kEeVkkIA~LARL~LsEEEle~~~~qLn 87 (156)
+|+|+ ++...|.|+.++++++-.+ +.+||++.+.+..--.
T Consensus 6 ~~gy~~g~~~~~~~i~m~~le~Lk~~--~~fTeeD~~~L~~l~~ 47 (195)
T 2veb_A 6 IPGYTYGETENRAPFNLEDLKLLKEA--VMFTAEDEEYIQKAGE 47 (195)
T ss_dssp CTTCCTTCCCCCCSCCHHHHHHHHHH--HTCCHHHHHHHHHHHH
T ss_pred CCCCCCCCccccCCccHHHHHHHHHH--hCCCHHHHHHHHHhHH
Confidence 34444 3447789999999998765 5678888876654433
No 55
>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A
Probab=21.51 E-value=1.1e+02 Score=19.39 Aligned_cols=31 Identities=10% Similarity=0.161 Sum_probs=23.8
Q ss_pred CCCCChhHHHHHHHHc---CCCCCHHHHHHHHHH
Q 031606 55 RSSLEPPDVPRLAQTA---RISLTPHEVEEFAPK 85 (156)
Q Consensus 55 ~m~I~kEeVkkIA~LA---RL~LsEEEle~~~~q 85 (156)
.-.|+.++++++..-. ...+++++++.+...
T Consensus 55 ~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~ 88 (109)
T 1rwy_A 55 SGFIEEDELGSILKGFSSDARDLSAKETKTLMAA 88 (109)
T ss_dssp SSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHH
T ss_pred CCeEcHHHHHHHHHHHhccCCCCCHHHHHHHHHH
Confidence 3569999999988776 678898887765544
No 56
>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A
Probab=21.49 E-value=1.2e+02 Score=20.64 Aligned_cols=33 Identities=15% Similarity=0.232 Sum_probs=25.8
Q ss_pred CCCCChhHHHHHHH--Hc---CCCCCHHHHHHHHHHHH
Q 031606 55 RSSLEPPDVPRLAQ--TA---RISLTPHEVEEFAPKIR 87 (156)
Q Consensus 55 ~m~I~kEeVkkIA~--LA---RL~LsEEEle~~~~qLn 87 (156)
.-.|+.+|++++-. |. .-.++++|++.+.++++
T Consensus 26 ~G~Is~~EL~~~l~~~l~~~lg~~~~~~ev~~~i~~~D 63 (101)
T 3nso_A 26 KYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLD 63 (101)
T ss_dssp TTEECHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHH
T ss_pred CCEECHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHhC
Confidence 36799999999886 32 35788999999887764
No 57
>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A
Probab=21.39 E-value=1.2e+02 Score=20.30 Aligned_cols=32 Identities=3% Similarity=0.124 Sum_probs=25.2
Q ss_pred CCCCCChhHHHHHHHHcCCCCCHHHHHHHHHH
Q 031606 54 TRSSLEPPDVPRLAQTARISLTPHEVEEFAPK 85 (156)
Q Consensus 54 ~~m~I~kEeVkkIA~LARL~LsEEEle~~~~q 85 (156)
+.-.|+.++++++..-....+++++++.+...
T Consensus 104 ~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~ 135 (158)
T 2jnf_A 104 GNGYISTDVMREILAELDETLSSEDLDAMIDE 135 (158)
T ss_dssp SSSSEEHHHHHHHHHHHCTTCCHHHHHHHHHH
T ss_pred CCCeEcHHHHHHHHHHhCCcCCHHHHHHHHHH
Confidence 34579999999998887888999887766443
No 58
>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A
Probab=21.26 E-value=1.7e+02 Score=20.33 Aligned_cols=33 Identities=9% Similarity=0.241 Sum_probs=27.4
Q ss_pred CCCCChhHHHHHHHHcCCCCCHHHHHHHHHHHH
Q 031606 55 RSSLEPPDVPRLAQTARISLTPHEVEEFAPKIR 87 (156)
Q Consensus 55 ~m~I~kEeVkkIA~LARL~LsEEEle~~~~qLn 87 (156)
.-.|+.++++.+..-.-..+++++++.+...++
T Consensus 64 ~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~~D 96 (150)
T 2jjz_A 64 EGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVT 96 (150)
T ss_dssp TSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHH
T ss_pred cCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHC
Confidence 357999999999887778899999988877664
No 59
>2gxg_A 146AA long hypothetical transcriptional regulator; winged helix; 1.45A {Sulfolobus tokodaii} PDB: 2eb7_A 2yr2_A 3gez_A 3gf2_A* 3gfi_A 3gfm_A 3gfj_A 3gfl_A
Probab=20.93 E-value=1.9e+02 Score=19.27 Aligned_cols=29 Identities=17% Similarity=0.221 Sum_probs=23.9
Q ss_pred HcCCCCCHHHHHHHHHHHHHHHHHHHHhc
Q 031606 69 TARISLTPHEVEEFAPKIRQVIDWFGQLQ 97 (156)
Q Consensus 69 LARL~LsEEEle~~~~qLn~ILe~~d~L~ 97 (156)
-.-=.++++|.+.+..-|..+.+.++.+.
T Consensus 117 ~~~~~l~~~e~~~l~~~l~~~~~~l~~~~ 145 (146)
T 2gxg_A 117 EVTGDLSEDEVILVLDKISKILKRIEEIS 145 (146)
T ss_dssp HHTTTSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHhcCCHHHHHHHHHHHHHHHHHHHhcc
Confidence 33447899999999999999999888653
No 60
>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10
Probab=20.84 E-value=98 Score=18.51 Aligned_cols=29 Identities=14% Similarity=0.213 Sum_probs=21.5
Q ss_pred CCCCChhHHHHHHHHcCCCCCHHHHHHHHH
Q 031606 55 RSSLEPPDVPRLAQTARISLTPHEVEEFAP 84 (156)
Q Consensus 55 ~m~I~kEeVkkIA~LARL~LsEEEle~~~~ 84 (156)
.-.|+.+++..+..-.. .+++++++.+..
T Consensus 17 ~G~i~~~el~~~l~~~g-~~~~~~~~~~~~ 45 (78)
T 1k9u_A 17 DGKISLSELTDALRTLG-STSADEVQRMMA 45 (78)
T ss_dssp SSEECHHHHHHHHHHHH-TCCHHHHHHHHH
T ss_pred CCcCcHHHHHHHHHHhC-CCCHHHHHHHHH
Confidence 35689999998876655 888888766544
No 61
>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}
Probab=20.54 E-value=1.2e+02 Score=20.64 Aligned_cols=32 Identities=9% Similarity=0.204 Sum_probs=25.3
Q ss_pred CCCCCChhHHHHHHHHcCC-CCCHHHHHHHHHH
Q 031606 54 TRSSLEPPDVPRLAQTARI-SLTPHEVEEFAPK 85 (156)
Q Consensus 54 ~~m~I~kEeVkkIA~LARL-~LsEEEle~~~~q 85 (156)
+...|+.++++++..-..+ .+++++++.+...
T Consensus 53 ~~G~I~~~el~~~l~~~g~~~~~~~e~~~~~~~ 85 (135)
T 3h4s_E 53 ERHLITAESLRRNSGILGIEGMSKEDAQGMVRE 85 (135)
T ss_dssp TTTBBCHHHHHHHGGGGTCCCCCHHHHHHHHHH
T ss_pred CCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHH
Confidence 4457999999999887775 8899988776554
No 62
>3gr3_A Nitroreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, flavoprotein; HET: MSE FMN UNL; 1.45A {Bartonella henselae str}
Probab=20.21 E-value=1.5e+02 Score=22.30 Aligned_cols=40 Identities=13% Similarity=0.212 Sum_probs=28.0
Q ss_pred cCCCCccCCCCCCCChhHHHHHHHHcCCC-------------CCHHHHHHHHHHHHH
Q 031606 45 RTRNCSTTTTRSSLEPPDVPRLAQTARIS-------------LTPHEVEEFAPKIRQ 88 (156)
Q Consensus 45 ~~~~~st~~~~m~I~kEeVkkIA~LARL~-------------LsEEEle~~~~qLn~ 88 (156)
++|.|+. ..|++|++++|-..|+.. +++++++++.+.+.+
T Consensus 18 SvR~f~~----~pV~~e~l~~il~aA~~APS~~N~Qpw~fiVv~~~~~~~l~~~~~~ 70 (230)
T 3gr3_A 18 SIRAFTD----QPVTQETIREILKLAARAPSGTNLQPWQVIVLTGKILQKVGQELSQ 70 (230)
T ss_dssp BCCCBCS----CCCCHHHHHHHHHHHTTSCCGGGCCCCEEEEECHHHHHHHHHHHHH
T ss_pred ehhccCC----CCCCHHHHHHHHHHHHhCcCcCCCCCeEEEEEeChHHHHHHHHHHH
Confidence 5677853 368999999999999854 456666555555443
No 63
>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*
Probab=20.12 E-value=1.9e+02 Score=18.94 Aligned_cols=32 Identities=6% Similarity=0.141 Sum_probs=25.6
Q ss_pred CCCCCChhHHHHHHHH-cCCCCCHHHHHHHHHH
Q 031606 54 TRSSLEPPDVPRLAQT-ARISLTPHEVEEFAPK 85 (156)
Q Consensus 54 ~~m~I~kEeVkkIA~L-ARL~LsEEEle~~~~q 85 (156)
+...|+.++++++..- ....+++++++.+...
T Consensus 88 ~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~ 120 (155)
T 3ll8_B 88 KDGYISNGELFQVLKMMVGNNLKDTQLQQIVDK 120 (155)
T ss_dssp CSSCBCHHHHHHHHHHHHGGGSCHHHHHHHHHH
T ss_pred CCCcCcHHHHHHHHHHHhccCCCHHHHHHHHHH
Confidence 3457999999998887 5788999988777665
Done!