BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031608
(156 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FG36|TRL31_ARATH Thioredoxin-like 3-1, chloroplastic OS=Arabidopsis thaliana
GN=WCRKC1 PE=2 SV=3
Length = 210
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/155 (50%), Positives = 108/155 (69%), Gaps = 12/155 (7%)
Query: 1 MTALAAKSSILYQELHRREGKQQFQQPWSSGSSSCLLLQKNSAFFWVDTASRSKSAR--- 57
M ALA+ +L ++ H G ++ +Q W S L L+K F V S K R
Sbjct: 26 MAALASNPQMLTRQAH---GNKK-EQLWRKES---LNLEKKCGFC-VSVYSNEKLGRSHM 77
Query: 58 -RDVRVEALWPDLSRPTSVELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLK 116
++ R++A W ++++PT++E+EPIN+ + LD +L A++LSQPI+I+WMASWCRKCIYLK
Sbjct: 78 EKEWRLKAFWSNIAQPTTLEMEPINNVEELDAVLSHARQLSQPIIIEWMASWCRKCIYLK 137
Query: 117 PKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS 151
PKLEKLAAE++ + KFYYVDVNKV + LVKRGNIS
Sbjct: 138 PKLEKLAAEYNNRAKFYYVDVNKVPQTLVKRGNIS 172
>sp|Q6Z7L3|TRL31_ORYSJ Thioredoxin-like 3-1, chloroplastic OS=Oryza sativa subsp. japonica
GN=Os02g0774100 PE=2 SV=2
Length = 193
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 70/92 (76%), Gaps = 3/92 (3%)
Query: 60 VRVEALWPDLSRPTSVELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKL 119
+R EA + D+S+P VE+E I+ + LD L + E QPI+IDWMASWCRKCIYLKP+L
Sbjct: 67 LRAEAYFWDVSKP--VEMEEIDSMEKLDDALRWSVENKQPIIIDWMASWCRKCIYLKPRL 124
Query: 120 EKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS 151
EK+A EF ++FY+VDVNKV + +VKRGNI+
Sbjct: 125 EKIAGEF-PGVRFYFVDVNKVPQTVVKRGNIT 155
>sp|Q8VZT6|TRL32_ARATH Thioredoxin-like 3-2, chloroplastic OS=Arabidopsis thaliana
GN=WCRKC2 PE=2 SV=1
Length = 192
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 59/80 (73%)
Query: 72 PTSVELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLK 131
P SVEL PI H DQ++ AQ+L + ++I WMA+WCRKCIYLKPKLEKLAAEF +L+
Sbjct: 73 PVSVELGPICGESHFDQVMEDAQKLGESVVIVWMAAWCRKCIYLKPKLEKLAAEFYPRLR 132
Query: 132 FYYVDVNKVSKDLVKRGNIS 151
FY+VDVN V LV R ++
Sbjct: 133 FYHVDVNAVPYRLVSRAGVT 152
>sp|P34723|THIO_PENCH Thioredoxin OS=Penicillium chrysogenum GN=TRXA PE=1 SV=1
Length = 106
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 92 RAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRG 148
+ + + P+++D+ A+WC C + P LEKL +E T ++FY VDV+++S+ G
Sbjct: 15 KVTDATGPVVVDFHATWCGPCKAIAPALEKL-SETHTGIQFYKVDVDELSEVAASNG 70
>sp|Q8IFW4|THIOT_DROME Thioredoxin-T OS=Drosophila melanogaster GN=TrxT PE=2 SV=1
Length = 157
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Query: 79 PINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVN 138
P+ + D LDQ L+ A++ + ++ID+ A WC C + PKL++LA E+ ++ V+V+
Sbjct: 4 PVRNKDDLDQQLILAED--KLVVIDFYADWCGPCKIIAPKLDELAHEYSDRVVVLKVNVD 61
Query: 139 KVSKDLVKRGNIS 151
+ ++D+ N++
Sbjct: 62 E-NEDITVEYNVN 73
>sp|O48737|TRXM1_ARATH Thioredoxin M1, chloroplastic OS=Arabidopsis thaliana GN=At1g03680
PE=1 SV=1
Length = 179
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 10/89 (11%)
Query: 51 SRSKSARRDVRVEALWPDLSRPTSVELEPINDSDHLDQILLRAQELSQPILIDWMASWCR 110
SR RR V EA + T+ + +NDS D ++L+A E P+ +D+ A WC
Sbjct: 56 SRVSRLRRGVICEA------QDTATGIPVVNDS-TWDSLVLKADE---PVFVDFWAPWCG 105
Query: 111 KCIYLKPKLEKLAAEFDTKLKFYYVDVNK 139
C + P + +LA ++ + KFY ++ ++
Sbjct: 106 PCKMIDPIVNELAQKYAGQFKFYKLNTDE 134
>sp|Q9SEU8|TRXM2_ARATH Thioredoxin M2, chloroplastic OS=Arabidopsis thaliana GN=At4g03520
PE=1 SV=2
Length = 186
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 48/88 (54%), Gaps = 10/88 (11%)
Query: 52 RSKSARRDVRVEALWPDLSRPTSVELEPINDSDHLDQILLRAQELSQPILIDWMASWCRK 111
R RR V EA + T+ +++ +NDS D ++L+A + P+++D+ A WC
Sbjct: 63 RVSRLRRAVVCEA------QETTTDIQVVNDST-WDSLVLKA---TGPVVVDFWAPWCGP 112
Query: 112 CIYLKPKLEKLAAEFDTKLKFYYVDVNK 139
C + P + LA + K+KFY ++ ++
Sbjct: 113 CKMIDPLVNDLAQHYTGKIKFYKLNTDE 140
>sp|Q9SEU6|TRXM4_ARATH Thioredoxin M4, chloroplastic OS=Arabidopsis thaliana GN=At3g15360
PE=1 SV=2
Length = 193
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 74 SVELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFY 133
+VE+ ++DS+ ++L E P+L+++ A WC C + P +++LA +F K KFY
Sbjct: 85 AVEVPNLSDSEWQTKVL----ESDVPVLVEFWAPWCGPCRMIHPIVDQLAKDFAGKFKFY 140
Query: 134 YVDVNKVSKDLVKRGNISVSIQI 156
++ ++ + G SV I
Sbjct: 141 KINTDESPNTANRYGIRSVPTVI 163
>sp|P52230|THIO_STRCO Thioredoxin OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2)
/ M145) GN=trxA PE=1 SV=4
Length = 110
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 84 DHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKD 143
D +Q +L+ +P+L+D+ A+WC C + P LE +AAE+ K++ +++++
Sbjct: 11 DSFEQDVLKND---KPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENPGT 67
Query: 144 LVKRGNISV 152
K G +S+
Sbjct: 68 AAKYGVMSI 76
>sp|A2YIW7|TRXH_ORYSI Thioredoxin H-type OS=Oryza sativa subsp. indica GN=TRXH PE=1 SV=1
Length = 122
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 81 NDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKV 140
++ D D + +A+E + ++ID+ ASWC C ++ P + A +F + F VDV+++
Sbjct: 12 HNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAV-FLKVDVDEL 70
Query: 141 SKDLVKRGNI 150
K++ ++ N+
Sbjct: 71 -KEVAEKYNV 79
>sp|Q0D840|TRXH1_ORYSJ Thioredoxin H1 OS=Oryza sativa subsp. japonica GN=TRXH PE=1 SV=1
Length = 122
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 81 NDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKV 140
++ D D + +A+E + ++ID+ ASWC C ++ P + A +F + F VDV+++
Sbjct: 12 HNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAV-FLKVDVDEL 70
Query: 141 SKDLVKRGNI 150
K++ ++ N+
Sbjct: 71 -KEVAEKYNV 79
>sp|P48384|TRXM_PEA Thioredoxin M-type, chloroplastic OS=Pisum sativum PE=2 SV=1
Length = 172
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYV 135
E++ +NDS D++++ ++ P+L+D+ A WC C + P +++LA E+ K+K Y +
Sbjct: 68 EVQVVNDSS-WDELVIGSE---TPVLVDFWAPWCGPCRMIAPIIDELAKEYAGKIKCYKL 123
Query: 136 DVNKVSKDLVKRG 148
+ ++ K G
Sbjct: 124 NTDESPNTATKYG 136
>sp|O51088|THIO_BORBU Thioredoxin OS=Borrelia burgdorferi (strain ATCC 35210 / B31 / CIP
102532 / DSM 4680) GN=trxA PE=3 SV=1
Length = 117
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 98 QPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNK 139
+P +ID+ A+WC C L P EKL+ +++ + FY VD +K
Sbjct: 29 RPAIIDFYANWCGPCKMLSPIFEKLSKKYENSIDFYKVDTDK 70
>sp|Q8LD49|TRXX_ARATH Thioredoxin X, chloroplastic OS=Arabidopsis thaliana GN=ATHX PE=2
SV=2
Length = 182
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVD 136
++ I +S+ +L E +QP+L++++A+WC C + P +E L+ E+ KL +D
Sbjct: 71 IKEIGESEFSSTVL----ESAQPVLVEFVATWCGPCKLIYPAMEALSQEYGDKLTIVKID 126
>sp|P07887|THIO2_CORNE Thioredoxin C-2 OS=Corynebacterium nephridii PE=1 SV=3
Length = 108
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 99 PILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVK 146
P+L+D+ A WC C + P LE+L+ E+ K+K VDV VK
Sbjct: 23 PVLVDFWAGWCAPCKAIAPVLEELSNEYAGKVKIVKVDVTSCEDTAVK 70
>sp|Q9XGS0|TRXM_BRANA Thioredoxin M-type, chloroplastic OS=Brassica napus PE=1 SV=1
Length = 177
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Query: 73 TSVELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKF 132
T+ + +NDS + ++L+A E P+++D+ A WC C + P + +LA ++ K+KF
Sbjct: 69 TATGIPMVNDS-TWESLVLKADE---PVVVDFWAPWCGPCKMIDPIVNELAQQYTGKIKF 124
Query: 133 YYVDVN 138
+ ++ +
Sbjct: 125 FKLNTD 130
>sp|O30974|THIO_MYCSM Thioredoxin OS=Mycobacterium smegmatis GN=trxA PE=3 SV=1
Length = 112
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 28/42 (66%)
Query: 97 SQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVN 138
S+P+L+D+ A+WC C + P LE++AAE +L +DV+
Sbjct: 23 SKPVLVDFWATWCGPCKMVAPVLEEIAAEKGDQLTVAKIDVD 64
>sp|Q9CM49|THIO_PASMU Thioredoxin OS=Pasteurella multocida (strain Pm70) GN=trxA PE=3
SV=1
Length = 106
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 28/41 (68%)
Query: 99 PILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNK 139
P+L+D+ A WC C + P L+++AAEF K+K +++++
Sbjct: 21 PVLLDFWAPWCGPCRMISPILDEIAAEFSGKVKVVKINIDE 61
>sp|Q9M7X9|CITRX_ARATH Thioredoxin-like protein CITRX, chloroplastic OS=Arabidopsis
thaliana GN=At3g06730 PE=1 SV=1
Length = 183
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 11/69 (15%)
Query: 91 LRAQELSQ--------PILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVN---K 139
L AQEL + P+++D+ A+WC CI + +LE LA E+++ VD + +
Sbjct: 80 LSAQELQELVKGDRKVPLIVDFYATWCGPCILMAQELEMLAVEYESNAIIVKVDTDDEYE 139
Query: 140 VSKDLVKRG 148
++D+ RG
Sbjct: 140 FARDMQVRG 148
>sp|P43785|THIO_HAEIN Thioredoxin OS=Haemophilus influenzae (strain ATCC 51907 / DSM
11121 / KW20 / Rd) GN=trxA PE=3 SV=1
Length = 107
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYV 135
E+ IND+D + +++ + PIL+D+ A WC C + P L++LA EF K+K +
Sbjct: 3 EVLHINDAD-FESVVVNS---DIPILLDFWAPWCGPCKMIAPVLDELAPEFAGKVKIVKM 58
Query: 136 DVN 138
+V+
Sbjct: 59 NVD 61
>sp|P22803|TRX2_YEAST Thioredoxin-2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=TRX2 PE=1 SV=3
Length = 104
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Query: 100 ILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS 151
+++D+ A+WC C + P +EK A ++ + FY +DV++VS D+ ++ +S
Sbjct: 22 VVVDFFATWCGPCKMIAPMIEKFAEQY-SDAAFYKLDVDEVS-DVAQKAEVS 71
>sp|Q8KEA4|THIO1_CHLTE Thioredoxin-1 OS=Chlorobium tepidum (strain ATCC 49652 / DSM 12025
/ TLS) GN=trx1 PE=3 SV=1
Length = 101
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 90 LLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNK 139
L+R EL P+ ID+ A WC C + P +++LA+EF +L V+V++
Sbjct: 8 LIRTSEL--PVFIDFWADWCGPCKMVAPSVKQLASEFKGRLIVVKVNVDQ 55
>sp|P29446|THIO2_DICDI Thioredoxin-2 (Fragment) OS=Dictyostelium discoideum GN=trxB PE=3
SV=1
Length = 88
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 6/62 (9%)
Query: 80 INDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNK 139
I+ ++ LD+ L+A+ L +ID+ A+WC C + P EKL+ EF T F +VD++K
Sbjct: 7 ISSNEELDK-HLQAERL----VIDFSAAWCGPCRAISPVFEKLSNEFVT-FTFVHVDIDK 60
Query: 140 VS 141
+S
Sbjct: 61 LS 62
>sp|P29447|THIO3_DICDI Thioredoxin-3 OS=Dictyostelium discoideum GN=trxC PE=1 SV=2
Length = 104
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 98 QPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVS 141
Q +++D+ A WC C + P +KL+ EF T F +VD++KV+
Sbjct: 20 QRVVVDFSAEWCGPCRAIAPVFDKLSNEF-TTFTFVHVDIDKVN 62
>sp|P29429|THIO_EMENI Thioredoxin OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 /
CBS 112.46 / NRRL 194 / M139) GN=TRX1 PE=1 SV=2
Length = 110
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 74 SVELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFY 133
S + PI + +L A+ +++D A+WC C + P +EK A + T FY
Sbjct: 4 SEHVPPITSKAEFQEKVLNAKGF---VVVDCFATWCGPCKAIAPTVEKFAQTY-TDASFY 59
Query: 134 YVDVNKVSKDLVKRG 148
+DV+++S+ + G
Sbjct: 60 QIDVDELSEVAAELG 74
>sp|Q9TW67|NGLY1_CAEEL Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase
OS=Caenorhabditis elegans GN=png-1 PE=1 SV=1
Length = 606
Score = 41.2 bits (95), Expect = 0.003, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 42/67 (62%), Gaps = 5/67 (7%)
Query: 86 LDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVN-KVSKDL 144
L+ IL R+ + ++ I+ID+ A+WC C + P E+ +AE+ ++ VN V++D+
Sbjct: 12 LNNILERS-DANRLIIIDFFANWCGPCRMISPIFEQFSAEYGNAT---FLKVNCDVARDI 67
Query: 145 VKRGNIS 151
V+R NIS
Sbjct: 68 VQRYNIS 74
>sp|Q8H2V6|CITRX_ORYSJ Thioredoxin-like protein CITRX, chloroplastic OS=Oryza sativa
subsp. japonica GN=Os08g0378900 PE=2 SV=1
Length = 189
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 99 PILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVN---KVSKDLVKRG 148
P+++D+ A+WC C+ + +E LA E++ F VD + ++++D+ RG
Sbjct: 102 PLIVDFYATWCGPCVLMAQDIEMLAVEYENNALFVKVDTDDEYELARDMQVRG 154
>sp|P09856|TRXF_SPIOL Thioredoxin F-type, chloroplastic OS=Spinacia oleracea PE=1 SV=2
Length = 190
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 98 QPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISV 152
+P+++D WC C + PK EKLA E+ + F +D N+ +K L K I V
Sbjct: 103 KPVVLDMFTQWCGPCKAMAPKYEKLAEEY-LDVIFLKLDCNQENKTLAKELGIRV 156
>sp|Q7M1B9|THIO_CHLAA Thioredoxin OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM
635 / J-10-fl) GN=trxA PE=1 SV=3
Length = 110
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 80 INDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVN 138
++DSD +++L + P+++D+ A WC C + P L+KLA E+ +L V+ +
Sbjct: 7 VHDSDFAEKVL----KSKTPVVVDFWAPWCGPCRVIAPILDKLAGEYAGRLTIAKVNTD 61
>sp|P23400|TRXM_CHLRE Thioredoxin M-type, chloroplastic OS=Chlamydomonas reinhardtii
GN=TRXM PE=1 SV=3
Length = 140
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLK 131
E +ND D ++L E S P+L+D+ A WC C + P ++++A E+ KLK
Sbjct: 35 EAGAVND-DTFKNVVL---ESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLK 86
>sp|P07591|TRXM_SPIOL Thioredoxin M-type, chloroplastic OS=Spinacia oleracea PE=1 SV=2
Length = 181
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYV 135
E++ +NDS + +L E P+++D+ A WC C + P +++LA E+ K+ Y +
Sbjct: 75 EVQDVNDSSWKEFVL----ESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKL 130
Query: 136 DVNK 139
+ ++
Sbjct: 131 NTDE 134
>sp|Q39239|TRXH4_ARATH Thioredoxin H4 OS=Arabidopsis thaliana GN=TRX4 PE=3 SV=2
Length = 119
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 32/51 (62%)
Query: 90 LLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKV 140
L +A+E ++ I+ID+ ASWC C + P LA +F + F+ VDV+++
Sbjct: 21 LDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAIFFKVDVDEL 71
>sp|Q7X8R5|TRXM2_ORYSJ Thioredoxin M2, chloroplastic OS=Oryza sativa subsp. japonica
GN=Os04g0530600 PE=2 SV=2
Length = 180
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 73 TSVELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKF 132
TS+++ + S Q L+ EL P+L+ + A+WC C + P + KL+ E++ KLK
Sbjct: 71 TSIQVPEVTKSTW--QSLVMESEL--PVLVGYWATWCGPCKMIDPVVGKLSKEYEGKLKC 126
Query: 133 YYVDVNK 139
Y ++ ++
Sbjct: 127 YKLNTDE 133
>sp|P97615|THIOM_RAT Thioredoxin, mitochondrial OS=Rattus norvegicus GN=Txn2 PE=2 SV=1
Length = 166
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 99 PILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVN 138
P+++D+ A WC C L P+LEK+ A+ K+ VD++
Sbjct: 80 PVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDID 119
>sp|P97493|THIOM_MOUSE Thioredoxin, mitochondrial OS=Mus musculus GN=Txn2 PE=2 SV=1
Length = 166
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 99 PILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVN 138
P+++D+ A WC C L P+LEK+ A+ K+ VD++
Sbjct: 80 PVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDID 119
>sp|Q99757|THIOM_HUMAN Thioredoxin, mitochondrial OS=Homo sapiens GN=TXN2 PE=1 SV=2
Length = 166
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 99 PILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVN 138
P+++D+ A WC C L P+LEK+ A+ K+ VD++
Sbjct: 80 PVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDID 119
>sp|P0A616|THIO_MYCTU Thioredoxin OS=Mycobacterium tuberculosis GN=trxA PE=1 SV=2
Length = 116
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 97 SQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVN 138
++P+L+D+ A+WC C + P LE++A E T L +DV+
Sbjct: 25 NKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVD 66
>sp|P0A617|THIO_MYCBO Thioredoxin OS=Mycobacterium bovis (strain ATCC BAA-935 /
AF2122/97) GN=trxA PE=3 SV=2
Length = 116
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 97 SQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVN 138
++P+L+D+ A+WC C + P LE++A E T L +DV+
Sbjct: 25 NKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVD 66
>sp|P08058|THIO_RHOSH Thioredoxin OS=Rhodobacter sphaeroides GN=trxA PE=1 SV=3
Length = 106
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 27/41 (65%)
Query: 99 PILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNK 139
P+++D+ A WC C + P LE+L+ E+ K+K V+V++
Sbjct: 21 PVVVDFWAEWCGPCRQIGPALEELSKEYAGKVKIVKVNVDE 61
>sp|Q5JMR9|TRXY_ORYSJ Thioredoxin Y, chloroplastic OS=Oryza sativa subsp. japonica
GN=Os01g0963400 PE=2 SV=2
Length = 168
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 86 LDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVS 141
D++L +++ +P+L+D+ A+WC C Y+ P L++++ + K++ +D K +
Sbjct: 69 FDELLEKSE---KPVLVDFYATWCGPCQYMVPILQEVSEKLGDKIQVVKIDTEKYT 121
>sp|P46843|TRXB_MYCLE Bifunctional thioredoxin reductase/thioredoxin OS=Mycobacterium
leprae (strain TN) GN=trxB/A PE=3 SV=1
Length = 458
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 28/42 (66%)
Query: 97 SQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVN 138
++P+L+D+ A+WC C + P LE++A+E +L +DV+
Sbjct: 367 NKPVLVDFWATWCGPCKMVAPVLEEIASEQRNQLTVAKLDVD 408
>sp|Q95108|THIOM_BOVIN Thioredoxin, mitochondrial OS=Bos taurus GN=TXN2 PE=1 SV=2
Length = 166
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 99 PILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVN 138
P+++D+ A WC C L P+LEK+ A+ K+ VD++
Sbjct: 80 PVVVDFHAQWCGPCKILGPRLEKVVAKQHGKVVMAKVDID 119
>sp|Q6H7E4|TRXM1_ORYSJ Thioredoxin M1, chloroplastic OS=Oryza sativa subsp. japonica
GN=Os02g0639900 PE=2 SV=1
Length = 173
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 27/41 (65%)
Query: 99 PILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNK 139
P+L+++ ASWC C + P + KL+ E++ KL Y ++ ++
Sbjct: 86 PVLVEFWASWCGPCKMIDPVIGKLSKEYEGKLNCYKLNTDE 126
>sp|P80028|TRXH_CHLRE Thioredoxin H-type OS=Chlamydomonas reinhardtii GN=TRXH PE=1 SV=3
Length = 113
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 27/46 (58%)
Query: 87 DQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKF 132
D L + +E +PI++D+ A+WC C + P E L+ ++ K+ F
Sbjct: 15 DAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIF 60
>sp|P00275|THIO1_CORNE Thioredoxin C-1 OS=Corynebacterium nephridii PE=1 SV=1
Length = 105
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 28/43 (65%)
Query: 97 SQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNK 139
S+P+++D+ A WC C + P L+++A E ++K V++++
Sbjct: 18 SEPVVVDFWAEWCGPCKMIAPALDEIATEMAGQVKIAKVNIDE 60
>sp|P14949|THIO_BACSU Thioredoxin OS=Bacillus subtilis (strain 168) GN=trxA PE=1 SV=3
Length = 104
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%)
Query: 100 ILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISV 152
+L D+ A WC C + P LE+L E KLK +DV++ + K G +S+
Sbjct: 20 VLADFWAPWCGPCKMIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGVMSI 72
>sp|O94504|TRX2_SCHPO Thioredoxin-2, mitochondrial OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=trx2 PE=1 SV=2
Length = 133
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 101 LIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRG 148
++D+ A WC C YLKP LEKL +E + K F V+ +K S K G
Sbjct: 51 VVDFYADWCGPCKYLKPFLEKL-SEQNQKASFIAVNADKFSDIAQKNG 97
>sp|P96132|THIO_THIRO Thioredoxin (Fragment) OS=Thiocapsa roseopersicina GN=trxA PE=3
SV=1
Length = 91
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 28/42 (66%)
Query: 98 QPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNK 139
+P+L+D+ A WC C + P L+++A E+ ++K +++++
Sbjct: 22 EPVLVDYWADWCGPCKMIAPVLDEIAGEYAGRIKVAKLNIDE 63
>sp|Q49WR2|THIO_STAS1 Thioredoxin OS=Staphylococcus saprophyticus subsp. saprophyticus
(strain ATCC 15305 / DSM 20229) GN=trxA PE=3 SV=1
Length = 104
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 101 LIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNK 139
L+D+ A+WC C + P LE+LA ++D K +DV++
Sbjct: 21 LVDFWATWCGPCKMIAPVLEELAGDYDGKANILKLDVDE 59
>sp|Q39241|TRXH5_ARATH Thioredoxin H5 OS=Arabidopsis thaliana GN=TRX5 PE=1 SV=1
Length = 118
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 93 AQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKV 140
A E + I+ID+ ASWC C ++ P ++A +F T + F+ +DV+++
Sbjct: 23 ANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKF-TNVVFFKIDVDEL 69
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.131 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,848,260
Number of Sequences: 539616
Number of extensions: 1824437
Number of successful extensions: 5358
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 161
Number of HSP's successfully gapped in prelim test: 64
Number of HSP's that attempted gapping in prelim test: 5169
Number of HSP's gapped (non-prelim): 253
length of query: 156
length of database: 191,569,459
effective HSP length: 107
effective length of query: 49
effective length of database: 133,830,547
effective search space: 6557696803
effective search space used: 6557696803
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)