Query 031608
Match_columns 156
No_of_seqs 200 out of 1539
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 03:58:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031608.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031608hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3zzx_A Thioredoxin; oxidoreduc 99.9 2.6E-21 8.8E-26 133.4 10.3 77 77-156 2-78 (105)
2 2av4_A Thioredoxin-like protei 99.9 8.4E-22 2.9E-26 145.3 8.2 78 77-156 23-100 (160)
3 2qsi_A Putative hydrogenase ex 99.8 2.8E-19 9.4E-24 129.2 6.7 76 77-156 17-94 (137)
4 3gix_A Thioredoxin-like protei 99.8 7.8E-19 2.7E-23 127.6 8.6 77 77-155 5-81 (149)
5 1gh2_A Thioredoxin-like protei 99.8 3.6E-18 1.2E-22 115.9 10.5 77 76-155 2-78 (107)
6 1xfl_A Thioredoxin H1; AT3G510 99.8 5.9E-18 2E-22 118.8 11.0 80 75-155 16-95 (124)
7 1ep7_A Thioredoxin CH1, H-type 99.8 5.3E-18 1.8E-22 115.5 10.0 80 76-155 3-82 (112)
8 3qfa_C Thioredoxin; protein-pr 99.8 2.8E-18 9.4E-23 119.0 8.7 75 78-155 14-88 (116)
9 4euy_A Uncharacterized protein 99.7 4.2E-19 1.5E-23 120.5 3.2 74 77-155 2-75 (105)
10 1qgv_A Spliceosomal protein U5 99.7 2.3E-18 7.8E-23 124.2 7.1 77 77-155 5-81 (142)
11 2qgv_A Hydrogenase-1 operon pr 99.7 6.3E-19 2.2E-23 127.8 4.1 75 77-156 19-96 (140)
12 3h79_A Thioredoxin-like protei 99.7 8.4E-18 2.9E-22 117.8 9.6 76 76-155 16-96 (127)
13 3m9j_A Thioredoxin; oxidoreduc 99.7 1.8E-17 6.1E-22 111.5 10.2 76 77-155 2-77 (105)
14 2vlu_A Thioredoxin, thioredoxi 99.7 1.9E-17 6.5E-22 114.6 10.3 79 76-155 13-91 (122)
15 2oe3_A Thioredoxin-3; electron 99.7 9.4E-18 3.2E-22 116.2 8.5 76 75-155 12-87 (114)
16 3d22_A TRXH4, thioredoxin H-ty 99.7 2.1E-17 7.1E-22 117.2 10.2 80 75-155 24-103 (139)
17 3f3q_A Thioredoxin-1; His TAG, 99.7 1.9E-17 6.5E-22 113.4 9.5 73 78-155 9-81 (109)
18 3gnj_A Thioredoxin domain prot 99.7 2.8E-17 9.7E-22 111.5 10.0 76 76-155 5-80 (111)
19 3d6i_A Monothiol glutaredoxin- 99.7 2.2E-17 7.4E-22 112.8 9.2 78 77-155 2-80 (112)
20 3qou_A Protein YBBN; thioredox 99.7 1.1E-17 3.7E-22 132.0 8.3 77 76-155 8-84 (287)
21 2vm1_A Thioredoxin, thioredoxi 99.7 4.7E-17 1.6E-21 111.6 9.9 79 76-155 7-85 (118)
22 1xwb_A Thioredoxin; dimerizati 99.7 7.4E-17 2.5E-21 108.4 10.4 77 77-155 2-78 (106)
23 1ti3_A Thioredoxin H, PTTRXH1; 99.7 5.8E-17 2E-21 110.3 10.0 79 76-155 5-83 (113)
24 3ga4_A Dolichyl-diphosphooligo 99.7 3.1E-17 1.1E-21 123.3 9.3 77 76-155 19-107 (178)
25 1r26_A Thioredoxin; redox-acti 99.7 4.4E-17 1.5E-21 114.8 9.4 74 77-155 21-94 (125)
26 2xc2_A Thioredoxinn; oxidoredu 99.7 5.7E-17 1.9E-21 111.8 9.8 75 77-155 15-89 (117)
27 3tco_A Thioredoxin (TRXA-1); d 99.7 4E-17 1.4E-21 110.1 8.5 73 78-155 7-79 (109)
28 1nsw_A Thioredoxin, TRX; therm 99.7 8E-17 2.7E-21 108.4 9.7 73 78-155 3-75 (105)
29 2vim_A Thioredoxin, TRX; thior 99.7 9.1E-17 3.1E-21 107.6 9.7 76 77-155 1-76 (104)
30 2wz9_A Glutaredoxin-3; protein 99.7 8.3E-17 2.8E-21 116.6 10.2 78 75-155 12-89 (153)
31 2f51_A Thioredoxin; electron t 99.7 9.1E-17 3.1E-21 111.7 9.9 75 77-155 5-80 (118)
32 2dml_A Protein disulfide-isome 99.7 5.6E-17 1.9E-21 113.4 8.6 76 76-155 18-93 (130)
33 1w4v_A Thioredoxin, mitochondr 99.7 9.8E-17 3.3E-21 111.3 9.7 76 77-155 14-89 (119)
34 3hxs_A Thioredoxin, TRXP; elec 99.7 7.7E-17 2.6E-21 114.3 9.2 79 76-155 23-109 (141)
35 3cxg_A Putative thioredoxin; m 99.7 2.6E-17 8.7E-22 117.0 6.6 76 76-155 21-96 (133)
36 2pu9_C TRX-F, thioredoxin F-ty 99.7 1.4E-16 4.6E-21 108.7 9.8 77 75-155 5-82 (111)
37 1dby_A Chloroplast thioredoxin 99.7 1.1E-16 3.7E-21 108.1 9.2 75 77-155 3-77 (107)
38 3aps_A DNAJ homolog subfamily 99.7 7.2E-17 2.4E-21 111.7 8.5 75 77-155 5-79 (122)
39 2j23_A Thioredoxin; immune pro 99.7 4.9E-17 1.7E-21 113.3 7.7 81 71-155 11-92 (121)
40 2dj1_A Protein disulfide-isome 99.7 8.3E-17 2.8E-21 113.9 8.4 75 76-155 18-95 (140)
41 3die_A Thioredoxin, TRX; elect 99.7 1.5E-16 5.2E-21 106.9 9.3 74 76-155 4-77 (106)
42 2trx_A Thioredoxin; electron t 99.7 1.2E-16 4E-21 108.1 8.7 75 77-155 4-78 (108)
43 2dj0_A Thioredoxin-related tra 99.7 9.4E-17 3.2E-21 113.9 8.6 77 76-155 8-91 (137)
44 1t00_A Thioredoxin, TRX; redox 99.7 1.3E-16 4.5E-21 108.7 8.9 75 77-155 7-81 (112)
45 1x5d_A Protein disulfide-isome 99.7 1.3E-16 4.3E-21 111.7 8.7 76 76-155 8-87 (133)
46 3fk8_A Disulphide isomerase; A 99.7 5.1E-17 1.8E-21 114.3 6.5 75 81-155 13-95 (133)
47 2i1u_A Thioredoxin, TRX, MPT46 99.7 1.8E-16 6.2E-21 109.2 9.0 77 75-155 12-88 (121)
48 2voc_A Thioredoxin; electron t 99.7 1.4E-16 4.9E-21 109.2 8.3 73 77-155 3-75 (112)
49 3evi_A Phosducin-like protein 99.7 5.9E-17 2E-21 114.0 6.3 75 76-156 4-78 (118)
50 3p2a_A Thioredoxin 2, putative 99.7 2.2E-16 7.4E-21 113.3 9.3 75 76-155 39-113 (148)
51 2l5l_A Thioredoxin; structural 99.7 4.3E-16 1.5E-20 110.5 10.7 79 76-155 10-96 (136)
52 2ppt_A Thioredoxin-2; thiredox 99.7 1.6E-16 5.6E-21 115.8 8.6 74 77-155 49-122 (155)
53 1faa_A Thioredoxin F; electron 99.7 4.5E-16 1.5E-20 108.1 10.5 76 76-155 19-95 (124)
54 3hz4_A Thioredoxin; NYSGXRC, P 99.7 1.9E-16 6.5E-21 113.0 8.6 76 76-155 7-82 (140)
55 3dxb_A Thioredoxin N-terminall 99.7 1.2E-16 4.2E-21 122.5 8.1 76 76-155 13-88 (222)
56 1syr_A Thioredoxin; SGPP, stru 99.7 2.6E-16 9E-21 107.7 8.8 73 78-155 11-83 (112)
57 1fb6_A Thioredoxin M; electron 99.7 3.4E-16 1.2E-20 104.9 8.9 74 78-155 3-76 (105)
58 2yzu_A Thioredoxin; redox prot 99.7 3.6E-16 1.2E-20 105.1 9.0 74 77-155 3-76 (109)
59 3uvt_A Thioredoxin domain-cont 99.7 2.9E-16 1E-20 106.3 8.5 74 76-155 6-82 (111)
60 3idv_A Protein disulfide-isome 99.7 3.2E-16 1.1E-20 119.9 9.5 124 25-155 82-208 (241)
61 3iv4_A Putative oxidoreductase 99.7 1.8E-16 6E-21 110.7 7.3 75 76-156 7-86 (112)
62 2i4a_A Thioredoxin; acidophIle 99.7 3.9E-16 1.3E-20 105.0 8.8 75 77-155 4-78 (107)
63 3ul3_B Thioredoxin, thioredoxi 99.7 1.7E-16 5.6E-21 111.4 7.1 61 95-155 40-100 (128)
64 1wou_A Thioredoxin -related pr 99.7 3E-16 1E-20 109.7 8.1 79 76-156 5-97 (123)
65 1x5e_A Thioredoxin domain cont 99.7 5.8E-16 2E-20 107.9 9.5 73 76-155 8-81 (126)
66 1thx_A Thioredoxin, thioredoxi 99.6 6.5E-16 2.2E-20 105.2 9.0 75 77-155 9-83 (115)
67 2o8v_B Thioredoxin 1; disulfid 99.6 3.1E-16 1E-20 110.7 6.8 75 77-155 24-98 (128)
68 1wmj_A Thioredoxin H-type; str 99.6 1.2E-16 4.2E-21 111.4 4.7 80 76-156 15-94 (130)
69 2e0q_A Thioredoxin; electron t 99.6 8.2E-16 2.8E-20 102.4 8.5 71 79-155 3-73 (104)
70 3q6o_A Sulfhydryl oxidase 1; p 99.6 8.1E-16 2.8E-20 119.1 9.4 76 76-155 13-93 (244)
71 2l6c_A Thioredoxin; oxidoreduc 99.6 2.3E-16 8E-21 108.0 5.6 72 78-155 5-76 (110)
72 3ed3_A Protein disulfide-isome 99.6 1.1E-15 3.8E-20 122.6 10.3 77 75-155 17-95 (298)
73 3idv_A Protein disulfide-isome 99.6 7.9E-16 2.7E-20 117.7 9.0 75 76-155 16-93 (241)
74 3apq_A DNAJ homolog subfamily 99.6 1.7E-15 5.7E-20 115.0 9.7 75 76-155 98-172 (210)
75 2fwh_A Thiol:disulfide interch 99.6 1.1E-15 3.8E-20 108.2 7.9 77 76-155 12-95 (134)
76 2dbc_A PDCL2, unnamed protein 99.6 7.4E-16 2.5E-20 109.7 6.7 75 75-155 10-84 (135)
77 2dj3_A Protein disulfide-isome 99.6 1E-16 3.6E-21 112.5 2.1 76 76-155 8-85 (133)
78 3emx_A Thioredoxin; structural 99.6 6.4E-16 2.2E-20 109.7 5.7 71 76-155 17-96 (135)
79 3f9u_A Putative exported cytoc 99.6 6.6E-16 2.2E-20 113.3 5.5 75 81-155 31-134 (172)
80 1mek_A Protein disulfide isome 99.6 6.5E-16 2.2E-20 105.6 5.0 75 76-155 8-85 (120)
81 1z6n_A Hypothetical protein PA 99.6 6E-16 2.1E-20 114.9 5.1 60 95-155 52-114 (167)
82 2r2j_A Thioredoxin domain-cont 99.6 2.2E-15 7.6E-20 124.0 8.7 75 76-155 6-86 (382)
83 1zma_A Bacterocin transport ac 99.6 8.4E-16 2.9E-20 106.1 4.9 72 77-155 14-91 (118)
84 2l57_A Uncharacterized protein 99.6 1.9E-15 6.5E-20 105.3 6.7 61 95-155 24-86 (126)
85 1v98_A Thioredoxin; oxidoreduc 99.6 3.9E-15 1.3E-19 105.7 7.9 75 76-155 34-108 (140)
86 2b5e_A Protein disulfide-isome 99.6 1E-14 3.5E-19 123.6 11.1 76 75-155 14-90 (504)
87 1oaz_A Thioredoxin 1; immune s 99.6 9.1E-16 3.1E-20 107.6 3.1 75 77-155 5-93 (123)
88 2djj_A PDI, protein disulfide- 99.6 1.7E-15 6E-20 104.4 4.1 73 76-155 8-85 (121)
89 2ywm_A Glutaredoxin-like prote 99.6 1.3E-14 4.3E-19 110.9 9.0 119 24-155 73-193 (229)
90 1fo5_A Thioredoxin; disulfide 99.5 2.3E-15 7.9E-20 97.5 3.9 58 98-155 3-60 (85)
91 1a0r_P Phosducin, MEKA, PP33; 99.5 4.5E-15 1.6E-19 116.5 6.3 78 75-155 112-189 (245)
92 1nho_A Probable thioredoxin; b 99.5 2.3E-15 7.8E-20 97.5 3.6 57 99-155 3-59 (85)
93 3ira_A Conserved protein; meth 99.5 4E-15 1.4E-19 111.2 4.8 70 83-156 29-109 (173)
94 3f8u_A Protein disulfide-isome 99.5 2.2E-14 7.5E-19 120.7 9.2 74 77-155 3-79 (481)
95 2kuc_A Putative disulphide-iso 99.5 5.8E-15 2E-19 103.0 4.7 73 83-155 13-90 (130)
96 2es7_A Q8ZP25_salty, putative 99.5 3.2E-15 1.1E-19 108.0 3.3 73 77-155 19-95 (142)
97 3qcp_A QSOX from trypanosoma b 99.5 8.9E-15 3E-19 124.2 6.2 77 76-155 24-108 (470)
98 3t58_A Sulfhydryl oxidase 1; o 99.5 2.7E-14 9.3E-19 122.6 9.2 76 76-155 13-93 (519)
99 1a8l_A Protein disulfide oxido 99.5 2.6E-14 8.9E-19 108.6 8.0 70 82-155 122-196 (226)
100 2yj7_A LPBCA thioredoxin; oxid 99.3 1.3E-15 4.6E-20 101.7 0.0 74 78-155 4-77 (106)
101 2trc_P Phosducin, MEKA, PP33; 99.5 1.2E-14 4.1E-19 111.9 5.4 78 75-155 99-176 (217)
102 1sji_A Calsequestrin 2, calseq 99.5 4E-14 1.4E-18 115.0 8.7 74 76-155 12-93 (350)
103 2ju5_A Thioredoxin disulfide i 99.5 1.6E-14 5.6E-19 104.7 5.7 72 84-155 34-120 (154)
104 3us3_A Calsequestrin-1; calciu 99.5 6.8E-14 2.3E-18 114.8 9.4 75 76-155 14-95 (367)
105 2lst_A Thioredoxin; structural 99.2 2E-15 6.9E-20 105.6 0.0 62 95-156 17-83 (130)
106 3s9f_A Tryparedoxin; thioredox 99.5 3.8E-14 1.3E-18 103.8 6.7 84 60-155 22-132 (165)
107 3ph9_A Anterior gradient prote 99.5 1.9E-14 6.4E-19 105.3 4.7 77 79-156 26-105 (151)
108 2djk_A PDI, protein disulfide- 99.5 3.3E-14 1.1E-18 100.8 5.8 72 78-155 9-82 (133)
109 1o73_A Tryparedoxin; electron 99.5 1.8E-13 6.1E-18 96.7 9.5 82 62-155 4-112 (144)
110 3kp8_A Vkorc1/thioredoxin doma 99.5 7.3E-15 2.5E-19 101.1 1.9 54 96-155 11-70 (106)
111 3apo_A DNAJ homolog subfamily 99.5 1.3E-13 4.3E-18 122.4 10.3 118 26-155 611-733 (780)
112 2lrn_A Thiol:disulfide interch 99.5 1E-13 3.5E-18 99.2 7.3 84 61-155 4-113 (152)
113 3hcz_A Possible thiol-disulfid 99.5 7.5E-14 2.6E-18 98.5 6.4 85 60-155 5-115 (148)
114 4fo5_A Thioredoxin-like protei 99.5 1.7E-13 5.8E-18 97.1 8.2 71 59-141 6-77 (143)
115 1sen_A Thioredoxin-like protei 99.5 6.6E-15 2.3E-19 108.2 0.7 61 95-155 44-107 (164)
116 1ilo_A Conserved hypothetical 99.5 1.1E-13 3.9E-18 88.1 6.3 53 100-155 2-54 (77)
117 3fkf_A Thiol-disulfide oxidore 99.5 1.2E-13 4.2E-18 97.4 6.8 87 59-155 4-118 (148)
118 1o8x_A Tryparedoxin, TRYX, TXN 99.5 1.5E-13 5.2E-18 97.7 7.2 60 96-155 27-112 (146)
119 3f8u_A Protein disulfide-isome 99.4 1.3E-13 4.5E-18 115.9 7.7 74 77-155 354-429 (481)
120 2hls_A Protein disulfide oxido 99.4 2.6E-13 8.9E-18 105.7 8.8 60 96-155 137-200 (243)
121 2b5x_A YKUV protein, TRXY; thi 99.4 1.7E-13 5.7E-18 96.5 6.8 60 96-155 28-114 (148)
122 3eur_A Uncharacterized protein 99.4 1.8E-13 6.2E-18 96.9 6.8 73 60-143 5-81 (142)
123 3apo_A DNAJ homolog subfamily 99.4 1.8E-13 6.1E-18 121.4 7.8 75 76-155 117-191 (780)
124 1i5g_A Tryparedoxin II; electr 99.4 3.8E-13 1.3E-17 95.3 7.9 60 96-155 27-112 (144)
125 2lrt_A Uncharacterized protein 99.4 3.9E-13 1.3E-17 96.8 7.6 82 62-154 11-116 (152)
126 3ewl_A Uncharacterized conserv 99.4 1.4E-13 4.8E-18 97.0 5.0 71 62-143 3-77 (142)
127 3hdc_A Thioredoxin family prot 99.4 6.7E-13 2.3E-17 95.6 8.6 86 58-154 13-118 (158)
128 3fw2_A Thiol-disulfide oxidore 99.4 7.3E-13 2.5E-17 94.5 8.2 86 59-154 4-119 (150)
129 3uem_A Protein disulfide-isome 99.4 3.3E-13 1.1E-17 109.5 7.1 73 77-155 251-325 (361)
130 1lu4_A Soluble secreted antige 99.4 7.1E-13 2.4E-17 92.1 7.7 59 96-155 23-103 (136)
131 3or5_A Thiol:disulfide interch 99.4 7.2E-13 2.4E-17 95.3 7.9 52 96-147 33-85 (165)
132 3eyt_A Uncharacterized protein 99.4 3.8E-13 1.3E-17 96.4 6.2 43 96-138 27-71 (158)
133 2c0g_A ERP29 homolog, windbeut 99.4 9.2E-13 3.1E-17 103.5 8.6 71 76-155 17-99 (248)
134 3gl3_A Putative thiol:disulfid 99.4 6.3E-13 2.2E-17 94.5 6.9 59 96-154 27-108 (152)
135 2f9s_A Thiol-disulfide oxidore 99.4 7.5E-13 2.6E-17 94.3 6.9 59 96-154 25-106 (151)
136 3erw_A Sporulation thiol-disul 99.4 9.6E-13 3.3E-17 92.3 7.1 60 96-155 33-118 (145)
137 3lor_A Thiol-disulfide isomera 99.4 5E-13 1.7E-17 95.8 5.8 42 96-137 29-72 (160)
138 2lja_A Putative thiol-disulfid 99.4 1E-12 3.4E-17 93.5 6.8 60 96-155 29-112 (152)
139 1a8l_A Protein disulfide oxido 99.4 4.6E-13 1.6E-17 101.7 5.3 72 81-155 7-82 (226)
140 3raz_A Thioredoxin-related pro 99.4 1.6E-12 5.3E-17 92.9 7.3 44 96-139 23-67 (151)
141 2b1k_A Thiol:disulfide interch 99.3 1.1E-12 3.7E-17 95.2 6.1 86 56-153 18-127 (168)
142 3kh7_A Thiol:disulfide interch 99.3 8.7E-13 3E-17 97.3 5.6 87 54-153 24-134 (176)
143 1zzo_A RV1677; thioredoxin fol 99.3 2.9E-12 1E-16 88.7 7.7 59 96-155 24-105 (136)
144 3kcm_A Thioredoxin family prot 99.3 2.8E-12 9.6E-17 91.3 7.6 59 96-154 27-109 (154)
145 3ia1_A THIO-disulfide isomeras 99.3 1.9E-12 6.5E-17 92.3 6.7 82 59-154 4-112 (154)
146 2cvb_A Probable thiol-disulfid 99.3 2.4E-12 8.1E-17 95.2 7.3 84 60-154 7-119 (188)
147 2b5e_A Protein disulfide-isome 99.3 1.7E-12 5.8E-17 109.9 7.0 74 76-155 359-435 (504)
148 1kng_A Thiol:disulfide interch 99.3 2.9E-12 1E-16 91.2 6.7 85 58-154 6-120 (156)
149 3lwa_A Secreted thiol-disulfid 99.3 3.2E-12 1.1E-16 94.1 6.8 52 96-147 58-117 (183)
150 3u5r_E Uncharacterized protein 99.3 5.3E-12 1.8E-16 96.4 8.1 86 58-154 30-146 (218)
151 3ha9_A Uncharacterized thiored 99.3 5.2E-12 1.8E-16 91.3 7.7 67 60-138 11-77 (165)
152 4evm_A Thioredoxin family prot 99.3 5.9E-12 2E-16 86.8 7.1 60 96-155 21-108 (138)
153 2fgx_A Putative thioredoxin; N 99.3 4.6E-12 1.6E-16 87.7 6.3 55 98-155 29-83 (107)
154 2ywm_A Glutaredoxin-like prote 99.3 4.7E-12 1.6E-16 96.5 6.7 72 82-155 7-85 (229)
155 1ttz_A Conserved hypothetical 99.3 3E-12 1E-16 85.3 4.8 49 101-155 3-51 (87)
156 3dwv_A Glutathione peroxidase- 99.3 3.9E-12 1.3E-16 94.6 5.7 71 57-138 17-88 (187)
157 3kij_A Probable glutathione pe 99.3 6.3E-12 2.1E-16 92.8 6.6 69 60-139 12-81 (180)
158 2h30_A Thioredoxin, peptide me 99.3 5.9E-12 2E-16 90.5 6.0 61 95-155 36-125 (164)
159 1jfu_A Thiol:disulfide interch 99.3 2.2E-11 7.5E-16 89.7 8.7 55 96-150 59-119 (186)
160 2ywi_A Hypothetical conserved 99.2 7.7E-12 2.6E-16 92.8 6.1 59 96-154 44-133 (196)
161 2lus_A Thioredoxion; CR-Trp16, 98.9 6.3E-13 2.2E-17 93.5 0.0 60 96-155 24-112 (143)
162 2p31_A CL683, glutathione pero 99.2 8.5E-12 2.9E-16 92.2 6.0 71 58-139 21-92 (181)
163 2v1m_A Glutathione peroxidase; 99.2 9.5E-12 3.2E-16 89.8 5.9 69 60-139 5-74 (169)
164 2k8s_A Thioredoxin; dimer, str 99.2 4E-12 1.4E-16 82.3 3.1 55 101-155 4-59 (80)
165 2qc7_A ERP31, ERP28, endoplasm 99.2 3.2E-11 1.1E-15 94.2 8.7 71 76-155 6-87 (240)
166 3drn_A Peroxiredoxin, bacterio 99.2 1.6E-11 5.6E-16 88.9 6.1 80 61-151 3-106 (161)
167 2e7p_A Glutaredoxin; thioredox 99.2 1.5E-11 5.1E-16 84.2 5.4 53 97-154 19-76 (116)
168 2f8a_A Glutathione peroxidase 99.2 1.6E-11 5.6E-16 93.4 6.1 43 96-138 46-89 (208)
169 2p5q_A Glutathione peroxidase 99.2 2E-11 6.9E-16 88.1 6.0 43 96-138 31-74 (170)
170 2vup_A Glutathione peroxidase- 99.2 3.6E-11 1.2E-15 89.5 7.3 68 60-138 22-90 (190)
171 2hyx_A Protein DIPZ; thioredox 99.2 3.9E-11 1.3E-15 98.5 8.2 59 96-154 81-167 (352)
172 3dml_A Putative uncharacterize 99.2 3.6E-12 1.2E-16 89.4 1.7 61 96-156 17-81 (116)
173 2l5o_A Putative thioredoxin; s 99.2 3.5E-11 1.2E-15 85.5 6.8 60 96-155 27-110 (153)
174 2hls_A Protein disulfide oxido 99.2 2.8E-11 9.5E-16 94.1 6.8 76 77-155 8-90 (243)
175 2ls5_A Uncharacterized protein 98.8 1.9E-12 6.5E-17 93.1 0.0 53 96-148 32-87 (159)
176 1hyu_A AHPF, alkyl hydroperoxi 99.2 6.8E-11 2.3E-15 101.0 8.9 70 82-155 105-174 (521)
177 2obi_A PHGPX, GPX-4, phospholi 99.2 3.8E-11 1.3E-15 88.6 6.4 70 58-138 19-89 (183)
178 2dlx_A UBX domain-containing p 99.2 3.9E-11 1.3E-15 87.8 6.1 73 83-155 28-105 (153)
179 2gs3_A PHGPX, GPX-4, phospholi 99.2 5.2E-11 1.8E-15 88.3 6.8 70 58-138 21-91 (185)
180 2k6v_A Putative cytochrome C o 99.2 5.8E-11 2E-15 85.8 6.8 66 62-139 12-82 (172)
181 1xvw_A Hypothetical protein RV 99.1 4.4E-11 1.5E-15 85.9 5.7 69 60-139 9-80 (160)
182 3cmi_A Peroxiredoxin HYR1; thi 99.1 3.6E-11 1.2E-15 87.8 5.3 42 96-138 31-73 (171)
183 2rli_A SCO2 protein homolog, m 99.1 1.8E-10 6.3E-15 83.2 7.2 44 96-139 25-74 (171)
184 2ggt_A SCO1 protein homolog, m 99.1 1.1E-10 3.6E-15 83.9 5.9 44 96-139 22-71 (164)
185 2bmx_A Alkyl hydroperoxidase C 99.1 8.6E-11 2.9E-15 87.8 5.4 44 96-139 44-89 (195)
186 1we0_A Alkyl hydroperoxide red 99.1 6.7E-11 2.3E-15 87.6 4.8 44 96-139 30-75 (187)
187 1wjk_A C330018D20RIK protein; 99.1 5.2E-11 1.8E-15 80.7 3.8 54 96-154 14-69 (100)
188 3kp9_A Vkorc1/thioredoxin doma 99.1 8.6E-12 2.9E-16 100.1 -0.1 62 84-155 190-255 (291)
189 1zof_A Alkyl hydroperoxide-red 99.1 5.5E-11 1.9E-15 88.9 3.7 44 96-139 32-77 (198)
190 1ego_A Glutaredoxin; electron 99.1 9E-11 3.1E-15 76.0 4.1 54 100-154 2-61 (85)
191 1xzo_A BSSCO, hypothetical pro 99.1 1.2E-10 4.2E-15 84.4 5.3 68 60-138 7-78 (174)
192 1qmv_A Human thioredoxin perox 99.1 1.5E-10 5E-15 86.6 5.7 70 60-139 5-78 (197)
193 1uul_A Tryparedoxin peroxidase 99.1 1.6E-10 5.5E-15 86.8 6.0 70 60-139 6-80 (202)
194 2jsy_A Probable thiol peroxida 99.0 2E-10 6.8E-15 83.2 4.5 68 60-139 18-86 (167)
195 3ztl_A Thioredoxin peroxidase; 99.0 3.4E-10 1.2E-14 86.6 5.0 72 58-139 38-113 (222)
196 1zye_A Thioredoxin-dependent p 99.0 4.7E-10 1.6E-14 85.8 5.6 71 59-139 26-100 (220)
197 2i81_A 2-Cys peroxiredoxin; st 99.0 6.2E-10 2.1E-14 84.8 5.9 71 60-139 21-96 (213)
198 3gkn_A Bacterioferritin comigr 99.0 8.6E-10 2.9E-14 79.4 6.4 69 60-139 7-79 (163)
199 2i3y_A Epididymal secretory gl 99.0 1.4E-09 4.6E-14 83.5 7.6 42 96-138 55-97 (215)
200 2h01_A 2-Cys peroxiredoxin; th 99.0 4.4E-10 1.5E-14 83.6 4.7 44 96-139 30-75 (192)
201 1xvq_A Thiol peroxidase; thior 99.0 7.8E-10 2.7E-14 81.2 5.6 67 60-139 18-85 (175)
202 4g2e_A Peroxiredoxin; redox pr 98.9 1.3E-10 4.3E-15 84.4 1.1 69 60-139 4-74 (157)
203 3uem_A Protein disulfide-isome 98.9 1.4E-09 4.7E-14 88.0 7.3 74 77-154 119-196 (361)
204 1nm3_A Protein HI0572; hybrid, 98.9 9.1E-10 3.1E-14 84.8 5.8 81 61-150 4-93 (241)
205 2pwj_A Mitochondrial peroxired 98.9 6.4E-10 2.2E-14 81.9 4.6 80 61-149 8-102 (171)
206 3uma_A Hypothetical peroxiredo 98.9 8.4E-10 2.9E-14 82.6 5.2 82 60-150 26-116 (184)
207 2b7k_A SCO1 protein; metalloch 98.9 1.5E-09 5.2E-14 81.5 6.3 44 96-139 40-88 (200)
208 2pn8_A Peroxiredoxin-4; thiore 98.9 1E-09 3.6E-14 83.4 5.4 73 59-141 18-94 (211)
209 1psq_A Probable thiol peroxida 98.9 1.3E-09 4.5E-14 78.9 5.5 78 60-149 16-97 (163)
210 1tp9_A Peroxiredoxin, PRX D (t 98.9 2E-09 6.9E-14 78.2 6.3 54 96-149 34-94 (162)
211 1q98_A Thiol peroxidase, TPX; 98.9 1.3E-09 4.3E-14 79.3 5.1 70 59-140 16-86 (165)
212 2r37_A Glutathione peroxidase 98.9 2.7E-09 9.2E-14 81.2 7.0 42 96-138 37-79 (207)
213 2wfc_A Peroxiredoxin 5, PRDX5; 98.9 1.6E-09 5.3E-14 79.7 5.1 79 61-149 4-90 (167)
214 4gqc_A Thiol peroxidase, perox 98.9 8.2E-11 2.8E-15 86.2 -1.8 72 59-139 4-77 (164)
215 2c0d_A Thioredoxin peroxidase 98.9 1.1E-09 3.7E-14 84.1 4.2 72 60-140 25-101 (221)
216 3me7_A Putative uncharacterize 98.9 3.1E-09 1.1E-13 77.8 6.0 66 62-138 3-73 (170)
217 2yzh_A Probable thiol peroxida 98.9 1.9E-09 6.4E-14 78.6 4.8 78 60-149 21-102 (171)
218 1un2_A DSBA, thiol-disulfide i 98.9 1.1E-09 3.6E-14 83.0 3.3 45 96-140 112-159 (197)
219 3mng_A Peroxiredoxin-5, mitoch 98.8 3.5E-09 1.2E-13 78.5 5.4 86 55-150 10-103 (173)
220 1n8j_A AHPC, alkyl hydroperoxi 98.8 4E-09 1.4E-13 78.4 5.4 45 96-140 29-75 (186)
221 3ixr_A Bacterioferritin comigr 98.8 5.3E-09 1.8E-13 77.2 5.7 68 61-139 26-95 (179)
222 3p7x_A Probable thiol peroxida 98.8 5.8E-09 2E-13 75.7 5.8 79 58-149 18-100 (166)
223 4hde_A SCO1/SENC family lipopr 98.8 8.7E-09 3E-13 75.6 6.4 74 62-146 8-88 (170)
224 2a4v_A Peroxiredoxin DOT5; yea 98.8 6.5E-09 2.2E-13 74.7 5.5 70 60-139 7-78 (159)
225 3qpm_A Peroxiredoxin; oxidored 98.8 8.8E-09 3E-13 80.0 6.2 73 59-141 47-123 (240)
226 1kte_A Thioltransferase; redox 98.8 5.8E-09 2E-13 70.2 4.5 52 100-154 13-71 (105)
227 3zrd_A Thiol peroxidase; oxido 98.8 6E-09 2E-13 78.6 4.8 71 59-141 51-122 (200)
228 3gyk_A 27KDA outer membrane pr 98.7 1.1E-08 3.9E-13 74.5 5.7 41 96-137 21-61 (175)
229 1h75_A Glutaredoxin-like prote 98.7 1.6E-08 5.5E-13 64.7 5.6 48 101-154 3-53 (81)
230 1prx_A HORF6; peroxiredoxin, h 98.7 2.7E-08 9.2E-13 76.4 6.8 70 59-140 4-76 (224)
231 1r7h_A NRDH-redoxin; thioredox 98.7 3.8E-08 1.3E-12 61.7 5.6 49 101-155 3-54 (75)
232 1eej_A Thiol:disulfide interch 98.7 1.8E-08 6E-13 76.7 4.7 38 96-136 85-122 (216)
233 3tjj_A Peroxiredoxin-4; thiore 98.7 1.7E-08 5.7E-13 79.2 4.6 73 59-141 61-137 (254)
234 2cq9_A GLRX2 protein, glutared 98.7 5.8E-08 2E-12 68.5 6.9 61 82-154 16-83 (130)
235 3a2v_A Probable peroxiredoxin; 98.6 2.3E-08 7.7E-13 78.4 4.2 70 60-139 5-77 (249)
236 3hd5_A Thiol:disulfide interch 98.6 6.8E-08 2.3E-12 71.7 6.5 44 96-139 24-67 (195)
237 2hze_A Glutaredoxin-1; thiored 98.6 1.5E-08 5.1E-13 69.8 2.0 54 98-154 18-78 (114)
238 2ht9_A Glutaredoxin-2; thiored 98.6 1.2E-07 4.2E-12 68.4 6.7 62 81-154 37-105 (146)
239 2v2g_A Peroxiredoxin 6; oxidor 98.6 6.5E-08 2.2E-12 74.9 5.5 69 60-140 3-74 (233)
240 1xcc_A 1-Cys peroxiredoxin; un 98.5 9.8E-08 3.4E-12 73.1 5.4 69 60-140 3-76 (220)
241 3hz8_A Thiol:disulfide interch 98.5 1.9E-07 6.5E-12 69.8 5.9 45 96-140 23-67 (193)
242 1t3b_A Thiol:disulfide interch 98.4 2.1E-07 7.2E-12 70.6 5.3 37 96-135 85-121 (211)
243 3c1r_A Glutaredoxin-1; oxidize 98.4 9.2E-08 3.2E-12 66.4 2.8 63 83-154 15-85 (118)
244 2yan_A Glutaredoxin-3; oxidore 98.4 6.1E-07 2.1E-11 60.6 6.5 59 84-154 8-75 (105)
245 3h93_A Thiol:disulfide interch 98.4 6E-07 2.1E-11 66.4 6.4 43 96-138 24-66 (192)
246 3keb_A Probable thiol peroxida 98.3 4.1E-07 1.4E-11 70.2 4.9 78 58-150 20-106 (224)
247 3l9v_A Putative thiol-disulfid 98.3 3E-07 1E-11 68.5 3.7 44 96-139 13-59 (189)
248 3qmx_A Glutaredoxin A, glutare 98.3 1.4E-06 4.7E-11 58.7 6.4 52 97-154 14-70 (99)
249 2klx_A Glutaredoxin; thioredox 98.3 4.7E-07 1.6E-11 59.0 4.0 49 100-154 7-58 (89)
250 3sbc_A Peroxiredoxin TSA1; alp 98.3 1.4E-06 4.8E-11 66.9 6.0 70 60-139 23-96 (216)
251 2khp_A Glutaredoxin; thioredox 98.2 2.3E-06 8E-11 55.8 5.6 49 100-154 7-59 (92)
252 3rhb_A ATGRXC5, glutaredoxin-C 98.2 2E-06 6.8E-11 58.6 5.2 60 83-154 9-76 (113)
253 1v58_A Thiol:disulfide interch 98.2 2.2E-06 7.4E-11 66.3 5.9 40 96-137 96-135 (241)
254 1fov_A Glutaredoxin 3, GRX3; a 98.2 3E-06 1E-10 53.8 5.4 48 101-154 3-54 (82)
255 3feu_A Putative lipoprotein; a 98.1 2.5E-06 8.5E-11 63.4 4.1 40 97-138 22-61 (185)
256 3h8q_A Thioredoxin reductase 3 98.1 3E-06 1E-10 58.2 3.8 60 83-154 7-73 (114)
257 2znm_A Thiol:disulfide interch 98.0 4E-06 1.4E-10 61.9 4.6 43 96-138 21-63 (195)
258 4f9z_D Endoplasmic reticulum r 98.0 5.3E-05 1.8E-09 57.5 10.2 69 77-150 115-186 (227)
259 3ic4_A Glutaredoxin (GRX-1); s 98.0 4.7E-06 1.6E-10 54.4 3.6 48 101-154 14-70 (92)
260 2l4c_A Endoplasmic reticulum r 98.0 4E-05 1.4E-09 53.7 8.2 64 76-150 22-85 (124)
261 4f82_A Thioredoxin reductase; 98.0 1.8E-05 6.2E-10 58.8 6.8 54 96-149 46-106 (176)
262 3ctg_A Glutaredoxin-2; reduced 97.9 2.1E-06 7.2E-11 60.5 1.3 64 82-154 26-97 (129)
263 3tue_A Tryparedoxin peroxidase 97.9 1.1E-05 3.9E-10 62.0 5.4 70 59-139 25-100 (219)
264 3nzn_A Glutaredoxin; structura 97.9 1.6E-05 5.6E-10 53.3 5.6 51 98-154 21-80 (103)
265 2rem_A Disulfide oxidoreductas 97.9 1.8E-05 6.2E-10 58.1 6.4 43 96-138 24-66 (193)
266 1z6m_A Conserved hypothetical 97.9 2.4E-05 8.1E-10 56.7 6.7 43 96-138 26-70 (175)
267 1wik_A Thioredoxin-like protei 97.9 3.1E-05 1.1E-09 52.5 6.4 59 84-154 6-73 (109)
268 2lqo_A Putative glutaredoxin R 97.9 1.8E-05 6E-10 52.8 4.9 48 101-154 6-58 (92)
269 3msz_A Glutaredoxin 1; alpha-b 97.9 5.1E-06 1.7E-10 53.5 2.1 52 99-154 4-64 (89)
270 3l9s_A Thiol:disulfide interch 97.8 1.8E-05 6.2E-10 59.0 4.6 43 96-138 20-65 (191)
271 3us3_A Calsequestrin-1; calciu 97.8 9.2E-05 3.2E-09 60.2 8.9 109 24-150 83-191 (367)
272 1sji_A Calsequestrin 2, calseq 97.8 0.00013 4.5E-09 58.7 9.6 107 26-150 83-189 (350)
273 2ec4_A FAS-associated factor 1 97.6 0.00016 5.5E-09 53.7 6.7 71 84-154 38-133 (178)
274 4eo3_A Bacterioferritin comigr 97.5 0.00016 5.3E-09 58.3 5.7 71 65-149 3-77 (322)
275 3c7m_A Thiol:disulfide interch 97.4 0.00038 1.3E-08 50.8 6.3 43 96-138 16-59 (195)
276 1xiy_A Peroxiredoxin, pfaop; a 97.3 0.00028 9.5E-09 52.5 5.4 55 96-150 42-104 (182)
277 4dvc_A Thiol:disulfide interch 97.3 0.00047 1.6E-08 49.7 6.4 42 96-137 20-61 (184)
278 4f9z_D Endoplasmic reticulum r 97.3 0.00042 1.4E-08 52.5 6.2 66 75-151 9-74 (227)
279 2xhf_A Peroxiredoxin 5; oxidor 97.3 0.00023 8E-09 52.5 4.3 82 59-149 13-100 (171)
280 2wci_A Glutaredoxin-4; redox-a 97.2 0.00046 1.6E-08 49.0 4.9 60 84-154 26-93 (135)
281 3l4n_A Monothiol glutaredoxin- 97.0 0.00071 2.4E-08 47.4 4.5 65 83-154 4-73 (127)
282 1nm3_A Protein HI0572; hybrid, 96.8 0.0027 9.2E-08 48.2 6.4 51 98-154 169-222 (241)
283 3ipz_A Monothiol glutaredoxin- 96.8 0.0035 1.2E-07 42.3 6.2 42 107-154 31-76 (109)
284 3zyw_A Glutaredoxin-3; metal b 96.8 0.0029 1E-07 43.0 5.8 47 102-154 19-74 (111)
285 1aba_A Glutaredoxin; electron 96.7 0.0053 1.8E-07 39.3 6.2 48 101-154 2-67 (87)
286 3gv1_A Disulfide interchange p 96.6 0.0021 7E-08 46.0 4.4 37 96-137 13-49 (147)
287 3gx8_A Monothiol glutaredoxin- 96.6 0.011 3.6E-07 40.8 7.7 42 107-154 29-77 (121)
288 2wem_A Glutaredoxin-related pr 96.5 0.0058 2E-07 42.1 6.0 60 83-154 10-79 (118)
289 2h8l_A Protein disulfide-isome 96.5 0.014 4.8E-07 44.6 8.5 65 76-150 7-71 (252)
290 1t1v_A SH3BGRL3, SH3 domain-bi 96.3 0.0064 2.2E-07 39.5 4.9 48 101-154 4-63 (93)
291 3gha_A Disulfide bond formatio 96.3 0.0091 3.1E-07 44.5 6.2 44 96-139 28-74 (202)
292 2r2j_A Thioredoxin domain-cont 96.1 0.028 9.4E-07 45.6 8.8 68 78-150 222-290 (382)
293 2axo_A Hypothetical protein AT 96.0 0.02 6.9E-07 45.1 7.1 54 99-154 44-117 (270)
294 2ct6_A SH3 domain-binding glut 96.0 0.011 3.8E-07 39.9 4.9 38 100-143 9-52 (111)
295 3ec3_A Protein disulfide-isome 96.0 0.025 8.4E-07 43.3 7.5 66 76-151 7-73 (250)
296 3gn3_A Putative protein-disulf 95.8 0.016 5.5E-07 42.6 5.7 42 96-137 13-55 (182)
297 3f4s_A Alpha-DSBA1, putative u 95.8 0.019 6.6E-07 43.6 6.2 43 96-138 38-83 (226)
298 3bci_A Disulfide bond protein 95.3 0.049 1.7E-06 39.3 6.5 43 96-138 10-55 (186)
299 3gmf_A Protein-disulfide isome 94.7 0.086 2.9E-06 39.4 6.7 43 96-138 14-59 (205)
300 3ed3_A Protein disulfide-isome 94.5 0.089 3E-06 41.4 6.6 98 25-139 84-199 (298)
301 3bj5_A Protein disulfide-isome 94.4 0.21 7.3E-06 35.2 7.9 69 78-151 17-88 (147)
302 3tdg_A DSBG, putative uncharac 94.3 0.055 1.9E-06 42.6 4.9 30 96-125 146-175 (273)
303 2x8g_A Thioredoxin glutathione 93.3 0.076 2.6E-06 45.4 4.5 59 84-154 9-74 (598)
304 2jad_A Yellow fluorescent prot 93.1 0.085 2.9E-06 43.2 4.2 53 101-154 263-321 (362)
305 2kok_A Arsenate reductase; bru 92.8 0.09 3.1E-06 35.9 3.4 33 101-139 7-39 (120)
306 1z3e_A Regulatory protein SPX; 92.8 0.12 4E-06 35.9 4.0 34 101-140 3-36 (132)
307 1rw1_A Conserved hypothetical 91.4 0.15 5.1E-06 34.4 3.2 33 101-139 2-34 (114)
308 1u6t_A SH3 domain-binding glut 91.1 0.33 1.1E-05 33.5 4.7 38 100-143 1-44 (121)
309 3l78_A Regulatory protein SPX; 90.6 0.29 9.8E-06 33.4 4.0 34 101-140 2-35 (120)
310 2h8l_A Protein disulfide-isome 90.6 0.64 2.2E-05 35.1 6.4 65 78-149 117-188 (252)
311 3ec3_A Protein disulfide-isome 90.6 0.76 2.6E-05 34.7 6.8 68 77-151 118-190 (250)
312 2wul_A Glutaredoxin related pr 90.3 0.61 2.1E-05 32.0 5.5 60 82-153 9-78 (118)
313 2g2q_A Glutaredoxin-2; thiored 89.9 0.73 2.5E-05 31.7 5.5 36 98-137 2-37 (124)
314 3q6o_A Sulfhydryl oxidase 1; p 89.4 3.9 0.00013 30.3 9.9 63 82-154 144-208 (244)
315 3fz4_A Putative arsenate reduc 88.9 0.59 2E-05 31.9 4.5 34 101-140 5-38 (120)
316 3kzq_A Putative uncharacterize 87.8 1.1 3.8E-05 32.7 5.8 39 99-137 3-41 (208)
317 3t58_A Sulfhydryl oxidase 1; o 87.1 1.5 5.2E-05 37.2 6.9 63 82-154 144-208 (519)
318 3gkx_A Putative ARSC family re 84.7 0.62 2.1E-05 31.8 2.7 34 101-140 6-39 (120)
319 2in3_A Hypothetical protein; D 81.8 4.3 0.00015 29.3 6.5 40 98-137 7-46 (216)
320 1s3c_A Arsenate reductase; ARS 81.1 0.8 2.7E-05 32.2 2.2 33 101-139 4-36 (141)
321 3rdw_A Putative arsenate reduc 79.0 0.83 2.8E-05 31.2 1.7 34 101-140 7-40 (121)
322 3f0i_A Arsenate reductase; str 67.5 4 0.00014 27.5 2.9 32 101-138 6-37 (119)
323 2imf_A HCCA isomerase, 2-hydro 61.6 14 0.00046 26.5 5.0 34 100-133 2-35 (203)
324 1t4y_A Adaptive-response senso 52.2 49 0.0017 22.0 7.9 55 100-154 13-69 (105)
325 1r4w_A Glutathione S-transfera 40.2 22 0.00074 26.0 3.1 29 99-127 6-34 (226)
326 2lnd_A De novo designed protei 39.8 46 0.0016 21.3 4.2 30 77-106 31-60 (112)
327 1wwj_A Circadian clock protein 35.7 25 0.00085 23.5 2.5 58 97-154 6-64 (105)
328 3ir4_A Glutaredoxin 2; glutath 30.1 50 0.0017 23.4 3.7 48 102-153 5-52 (218)
329 1ece_A Endocellulase E1; glyco 28.6 1.4E+02 0.0046 22.9 6.2 57 83-139 94-161 (358)
330 2jvx_A NF-kappa-B essential mo 25.8 8.4 0.00029 19.5 -0.9 19 109-127 6-24 (28)
331 3tfg_A ALR2278 protein; heme-b 25.7 1.6E+02 0.0055 21.0 5.8 42 97-138 127-168 (189)
332 3qho_A Endoglucanase, 458AA lo 25.5 1.5E+02 0.005 24.4 6.1 59 83-141 133-202 (458)
333 3vhs_A ATPase wrnip1; zinc fin 24.2 5.7 0.0002 19.7 -1.7 11 108-118 8-18 (29)
334 4f03_A Glutathione transferase 20.5 1.3E+02 0.0043 21.5 4.3 40 105-148 18-57 (253)
No 1
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.86 E-value=2.6e-21 Score=133.42 Aligned_cols=77 Identities=22% Similarity=0.455 Sum_probs=69.9
Q ss_pred eEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccceecC
Q 031608 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSIQI 156 (156)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~~~ 156 (156)
+..|.+.++|++.+.. ..+++++|+|||+||+||+.+.|.++++++.+++ +.|++||++++++++++|+|.++|+.+
T Consensus 2 V~~i~~~~~f~~~l~~--~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~vd~d~~~~l~~~~~V~~~PT~~ 78 (105)
T 3zzx_A 2 VYQVKDQEDFTKQLNE--AGNKLVVIDFYATWCGPCKMIAPKLEELSQSMSD-VVFLKVDVDECEDIAQDNQIACMPTFL 78 (105)
T ss_dssp CEECCSHHHHHHHHHH--TTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-EEEEEEETTTCHHHHHHTTCCBSSEEE
T ss_pred eEEeCCHHHHHHHHHh--cCCCEEEEEEECCCCCCccCCCcchhhhhhccCC-eEEEEEecccCHHHHHHcCCCeecEEE
Confidence 3568888999999975 4579999999999999999999999999999874 999999999999999999999999753
No 2
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.86 E-value=8.4e-22 Score=145.32 Aligned_cols=78 Identities=18% Similarity=0.219 Sum_probs=71.3
Q ss_pred eEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccceecC
Q 031608 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSIQI 156 (156)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~~~ 156 (156)
+..+.+.++|++.+.. ..+++|||+|||+|||||+.+.|.|+++++++++++.|++||+|++++++.+|+|.++|+.+
T Consensus 23 v~~l~t~~~f~~~v~~--~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~v~f~kVDVDe~~e~a~~y~V~siPT~~ 100 (160)
T 2av4_A 23 LQHLNSGWAVDQAIVN--EDERLVCIRFGHDYDPDCMKMDELLYKVADDIKNFCVIYLVDITEVPDFNTMYELYDPVSVM 100 (160)
T ss_dssp CEECCSHHHHHHHHHH--CSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCTTTTTTTCCSSEEEE
T ss_pred hhccCCHHHHHHHHHh--cCCCEEEEEEECCCChhHHHHHHHHHHHHHHccCCcEEEEEECCCCHHHHHHcCCCCCCEEE
Confidence 5678889999988852 36899999999999999999999999999999877999999999999999999999999863
No 3
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.78 E-value=2.8e-19 Score=129.23 Aligned_cols=76 Identities=11% Similarity=0.072 Sum_probs=67.7
Q ss_pred eEecCChhhHHHHHHHhhcCCCcEEEEEeCCCC--hhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCcccee
Q 031608 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWC--RKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSI 154 (156)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC--~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~ 154 (156)
...++ .++|++.+. ..++++||+|||+|| +||+.+.|++++++++|.+++.|++||+|++++++.+|||.++|+
T Consensus 17 ~~~vt-~~~F~~~v~---~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~v~~~KVdvDe~~~la~~ygV~siPT 92 (137)
T 2qsi_A 17 PTLVD-EATVDDFIA---HSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPGRLVAAEVAAEAERGLMARFGVAVCPS 92 (137)
T ss_dssp CEEEC-TTTHHHHHH---TSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTTEEEEEECGGGHHHHHHHHTCCSSSE
T ss_pred CcccC-HhHHHHHHh---cCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccCCcEEEEEECCCCHHHHHHcCCccCCE
Confidence 45665 468999885 345599999999999 999999999999999998889999999999999999999999997
Q ss_pred cC
Q 031608 155 QI 156 (156)
Q Consensus 155 ~~ 156 (156)
.|
T Consensus 93 li 94 (137)
T 2qsi_A 93 LA 94 (137)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 4
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.77 E-value=7.8e-19 Score=127.57 Aligned_cols=77 Identities=14% Similarity=0.196 Sum_probs=69.6
Q ss_pred eEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
+..+.+.++|++.+.. ..++++||+|||+||++|+.+.|.++++++++++.+.|+.||++++++++++|+|.++|+.
T Consensus 5 l~~i~~~~~~~~~i~~--~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~~~~~~vd~d~~~~l~~~~~v~~~Pt~ 81 (149)
T 3gix_A 5 LPKLTSKKEVDQAIKS--TAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYLVDVDQTAVYTQYFDISYIPST 81 (149)
T ss_dssp CCEECSHHHHHHHHHH--CCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTTEEEEEEETTTCCHHHHHTTCCSSSEE
T ss_pred eeecCCHHHHHHHHHh--cCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCcCHHHHHHcCCCccCeE
Confidence 4556778899998853 4689999999999999999999999999999987799999999999999999999999975
No 5
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.77 E-value=3.6e-18 Score=115.92 Aligned_cols=77 Identities=13% Similarity=0.295 Sum_probs=70.1
Q ss_pred ceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
.+..+.+.++|++.+.. ..+++++|+|||+||++|+.+.|.+++++++++ ++.|+.+|++++++++++|+|.++|+.
T Consensus 2 ~v~~i~~~~~~~~~~~~--~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 78 (107)
T 1gh2_A 2 GVKPVGSDPDFQPELSG--AGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP-QAVFLEVDVHQCQGTAATNNISATPTF 78 (107)
T ss_dssp CEEEECSGGGHHHHHHH--TTTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSHHHHHHTTCCSSSEE
T ss_pred ceEEecCHHHHHHHHHh--CCCCEEEEEEECCCChhhHHHHHHHHHHHHHCC-CcEEEEEECccCHHHHHhcCCCcccEE
Confidence 46788888999999963 368999999999999999999999999999995 599999999999999999999999974
No 6
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.76 E-value=5.9e-18 Score=118.81 Aligned_cols=80 Identities=19% Similarity=0.388 Sum_probs=73.3
Q ss_pred cceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCcccee
Q 031608 75 VELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSI 154 (156)
Q Consensus 75 ~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~ 154 (156)
..+..+.+.++|++.+..+...+++++|+|||+||++|+.+.|.|++++++++ ++.|+.||++++++++++|+|.++|+
T Consensus 16 ~~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~vd~d~~~~l~~~~~v~~~Pt 94 (124)
T 1xfl_A 16 GQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP-NVLFLKVDTDELKSVASDWAIQAMPT 94 (124)
T ss_dssp SCCEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS-SEEEEEEETTTSHHHHHHTTCCSSSE
T ss_pred CcEEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CcEEEEEECccCHHHHHHcCCCccCE
Confidence 45788888999999998665579999999999999999999999999999997 69999999999999999999999987
Q ss_pred c
Q 031608 155 Q 155 (156)
Q Consensus 155 ~ 155 (156)
.
T Consensus 95 ~ 95 (124)
T 1xfl_A 95 F 95 (124)
T ss_dssp E
T ss_pred E
Confidence 5
No 7
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.76 E-value=5.3e-18 Score=115.50 Aligned_cols=80 Identities=26% Similarity=0.510 Sum_probs=71.8
Q ss_pred ceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
.+..+++.++|++.+..+...+++++|.||++||++|+.+.|.|+++++++++++.|+.||++++++++++|+|.++|+.
T Consensus 3 ~v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 82 (112)
T 1ep7_A 3 SVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAAVAEAAGITAMPTF 82 (112)
T ss_dssp SEEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTTHHHHHHHTCCBSSEE
T ss_pred cEEEecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCCCeEEEEEECCchHHHHHHcCCCcccEE
Confidence 46788888999999975333389999999999999999999999999999986799999999999999999999999874
No 8
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.75 E-value=2.8e-18 Score=118.96 Aligned_cols=75 Identities=19% Similarity=0.352 Sum_probs=68.2
Q ss_pred EecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 78 EPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 78 ~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
....+.++|++++.. ..+++++|+|||+||++|+.+.|.++++++++++ +.|+.||++++++++++|+|.++|+.
T Consensus 14 ~~~~t~~~f~~~l~~--~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-v~~~~vd~d~~~~l~~~~~v~~~Pt~ 88 (116)
T 3qfa_C 14 KQIESKTAFQEALDA--AGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN-VIFLEVDVDDCQDVASECEVKSMPTF 88 (116)
T ss_dssp BCCCCHHHHHHHHHH--HTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT-SEEEEEETTTTHHHHHHTTCCSSSEE
T ss_pred cCCCCHHHHHHHHHh--cCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCCCHHHHHHcCCccccEE
Confidence 445678899999964 3799999999999999999999999999999986 99999999999999999999999874
No 9
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.74 E-value=4.2e-19 Score=120.50 Aligned_cols=74 Identities=9% Similarity=0.133 Sum_probs=52.7
Q ss_pred eEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
|..|++.++|++++ .++++++|+|||+||++|+.+.|.+++++++++ ++.|+.||++++++++++|+|.++|+.
T Consensus 2 m~~i~~~~~~~~~~----~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~-~~~~~~vd~~~~~~l~~~~~v~~~Pt~ 75 (105)
T 4euy_A 2 MNTFKTIEELATYI----EEQQLVLLFIKTENCGVCDVMLRKVNYVLENYN-YVEKIEILLQDMQEIAGRYAVFTGPTV 75 (105)
T ss_dssp --------CCSSST----TCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT-TEEEEEEEECCC---------CCCCEE
T ss_pred ccccCCHHHHHHHH----hcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC-CceEEEEECCCCHHHHHhcCCCCCCEE
Confidence 45677777888777 479999999999999999999999999999996 699999999999999999999999974
No 10
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.74 E-value=2.3e-18 Score=124.16 Aligned_cols=77 Identities=18% Similarity=0.266 Sum_probs=68.3
Q ss_pred eEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
+..+.+.++|++.+.. ..+++++|+|||+||++|+.+.|.++++++++.+++.|+.||++++++++++|+|.++|+.
T Consensus 5 l~~i~~~~~~~~~v~~--~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~~~~~~~i~~~Pt~ 81 (142)
T 1qgv_A 5 LPHLHNGWQVDQAILS--EEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDPCTV 81 (142)
T ss_dssp SCBCCSHHHHHHHHHT--CSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCTTTTSSCSCSSCEE
T ss_pred HhccCCHHHHHHHHHh--cCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCeEEEEEccccCHHHHHHcCCCCCCEE
Confidence 3456778899887742 2589999999999999999999999999999977799999999999999999999999874
No 11
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.74 E-value=6.3e-19 Score=127.77 Aligned_cols=75 Identities=12% Similarity=0.077 Sum_probs=67.6
Q ss_pred eEecCChhhHHHHHHHhhcCCCcEEEEEeCCC--ChhHHhhhHHHHHHHHHhcCC-eEEEEEECCCCHHHHHHhCCccce
Q 031608 77 LEPINDSDHLDQILLRAQELSQPILIDWMASW--CRKCIYLKPKLEKLAAEFDTK-LKFYYVDVNKVSKDLVKRGNISVS 153 (156)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~W--C~~Ck~~~p~l~~la~~~~~~-v~~~~vd~d~~~~l~~~~~i~sv~ 153 (156)
+..+ +.++|++.+. +++++||+|||+| ||||+.+.|.+++++++|.++ +.|++||+|++++++.+|||+++|
T Consensus 19 ~~~~-t~~~F~~~v~----~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvDe~~~lA~~ygV~sIP 93 (140)
T 2qgv_A 19 WTPV-SESRLDDWLT----QAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQSEAIGDRFGAFRFP 93 (140)
T ss_dssp CEEC-CHHHHHHHHH----TCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHHHHHHHHHHTCCSSS
T ss_pred CccC-CHHHHHHHHh----CCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCCCHHHHHHcCCccCC
Confidence 3455 4679999983 5789999999999 999999999999999999888 999999999999999999999999
Q ss_pred ecC
Q 031608 154 IQI 156 (156)
Q Consensus 154 ~~~ 156 (156)
+.|
T Consensus 94 Tli 96 (140)
T 2qgv_A 94 ATL 96 (140)
T ss_dssp EEE
T ss_pred EEE
Confidence 753
No 12
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.74 E-value=8.4e-18 Score=117.84 Aligned_cols=76 Identities=9% Similarity=0.204 Sum_probs=66.2
Q ss_pred ceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhc-----CCeEEEEEECCCCHHHHHHhCCc
Q 031608 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFD-----TKLKFYYVDVNKVSKDLVKRGNI 150 (156)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~-----~~v~~~~vd~d~~~~l~~~~~i~ 150 (156)
.+..++ .++|++.+. ..+++++|+|||+||++|+.+.|.|+++++.+. +++.|+.||++++++++++|+|.
T Consensus 16 ~v~~l~-~~~f~~~~~---~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~ 91 (127)
T 3h79_A 16 RVVELT-DETFDSIVM---DPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPDVIERMRVS 91 (127)
T ss_dssp CCEECC-TTTHHHHHT---CTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHHHHHHTTCC
T ss_pred ceEECC-hhhHHHHHh---CCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHhHHHhcCCc
Confidence 456665 568998884 358999999999999999999999999998753 46999999999999999999999
Q ss_pred cceec
Q 031608 151 SVSIQ 155 (156)
Q Consensus 151 sv~~~ 155 (156)
++|+.
T Consensus 92 ~~Pt~ 96 (127)
T 3h79_A 92 GFPTM 96 (127)
T ss_dssp SSSEE
T ss_pred cCCEE
Confidence 99864
No 13
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.74 E-value=1.8e-17 Score=111.47 Aligned_cols=76 Identities=20% Similarity=0.413 Sum_probs=69.6
Q ss_pred eEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
+..|++.++|++.+.. ..+++++|.|||+||++|+.+.|.++++++++++ +.|+.+|++++++++++|+|.++|+.
T Consensus 2 v~~i~~~~~~~~~l~~--~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~vd~~~~~~~~~~~~v~~~Pt~ 77 (105)
T 3m9j_A 2 VKQIESKTAFQEALDA--AGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN-VIFLEVDVDDCQDVASESEVKSMPTF 77 (105)
T ss_dssp CEECCSHHHHHHHHHH--TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT-SEEEEEETTTCHHHHHHTTCCBSSEE
T ss_pred eEEcCCHHHHHHHHHh--cCCCeEEEEEECCCChhhHHHHHHHHHHHHHccC-eEEEEEEhhhhHHHHHHcCCCcCcEE
Confidence 4578889999999964 3699999999999999999999999999999985 99999999999999999999999875
No 14
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.73 E-value=1.9e-17 Score=114.64 Aligned_cols=79 Identities=22% Similarity=0.386 Sum_probs=71.1
Q ss_pred ceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
....+.+.++|++.+..+...+++++|+||++||++|+.+.|.|+++++++++ +.|+.||++++++++++|+|.++|+.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~vd~~~~~~~~~~~~v~~~Pt~ 91 (122)
T 2vlu_A 13 EVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN-AVFLKVDVDELKPIAEQFSVEAMPTF 91 (122)
T ss_dssp CCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred cceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-cEEEEEECCCCHHHHHHcCCCcccEE
Confidence 45667778899999975445799999999999999999999999999999986 99999999999999999999999874
No 15
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.73 E-value=9.4e-18 Score=116.16 Aligned_cols=76 Identities=17% Similarity=0.443 Sum_probs=69.8
Q ss_pred cceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCcccee
Q 031608 75 VELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSI 154 (156)
Q Consensus 75 ~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~ 154 (156)
..+..+++.++|++++. ++++++|+|||+||++|+.+.|.++++++++++ +.|+.||++++++++++|+|.++|+
T Consensus 12 ~~~~~~~~~~~~~~~~~----~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~-v~~~~vd~~~~~~l~~~~~v~~~Pt 86 (114)
T 2oe3_A 12 TSITKLTNLTEFRNLIK----QNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD-VRFVKCDVDESPDIAKECEVTAMPT 86 (114)
T ss_dssp GGSCBCCSHHHHHHHHH----HCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSBSE
T ss_pred hheeecCCHHHHHHHHh----CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCCCHHHHHHCCCCcccE
Confidence 35677888999999884 589999999999999999999999999999986 9999999999999999999999987
Q ss_pred c
Q 031608 155 Q 155 (156)
Q Consensus 155 ~ 155 (156)
.
T Consensus 87 ~ 87 (114)
T 2oe3_A 87 F 87 (114)
T ss_dssp E
T ss_pred E
Confidence 4
No 16
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.73 E-value=2.1e-17 Score=117.19 Aligned_cols=80 Identities=20% Similarity=0.304 Sum_probs=72.3
Q ss_pred cceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCcccee
Q 031608 75 VELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSI 154 (156)
Q Consensus 75 ~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~ 154 (156)
..+..+.+.++|++.+..+...+++++|+|||+||++|+.+.|.+++++++++ ++.|+.||++++++++++|+|.++|+
T Consensus 24 ~~~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~v~~~~~~~~~~~~~v~~~Pt 102 (139)
T 3d22_A 24 GNVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYP-SLMFLVIDVDELSDFSASWEIKATPT 102 (139)
T ss_dssp TTCEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSHHHHHHTTCCEESE
T ss_pred CcEEEeCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CCEEEEEeCcccHHHHHHcCCCcccE
Confidence 35788888899999987654568999999999999999999999999999986 59999999999999999999999987
Q ss_pred c
Q 031608 155 Q 155 (156)
Q Consensus 155 ~ 155 (156)
.
T Consensus 103 ~ 103 (139)
T 3d22_A 103 F 103 (139)
T ss_dssp E
T ss_pred E
Confidence 4
No 17
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.73 E-value=1.9e-17 Score=113.38 Aligned_cols=73 Identities=19% Similarity=0.518 Sum_probs=66.8
Q ss_pred EecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 78 EPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 78 ~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
....+.++|++++ ..+++++|+|||+||++|+.+.|.++++++++++ +.|+.||++++++++++|+|.++|+.
T Consensus 9 ~~~~~~~~f~~~~----~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~-~~~~~vd~~~~~~l~~~~~v~~~Pt~ 81 (109)
T 3f3q_A 9 TQFKTASEFDSAI----AQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ-ADFYKLDVDELGDVAQKNEVSAMPTL 81 (109)
T ss_dssp EECCSHHHHHHHT----TSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred cCCCCHHHHHHHH----hcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC-CEEEEEECCCCHHHHHHcCCCccCEE
Confidence 4456788999998 5699999999999999999999999999999975 99999999999999999999999875
No 18
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.72 E-value=2.8e-17 Score=111.50 Aligned_cols=76 Identities=24% Similarity=0.469 Sum_probs=68.3
Q ss_pred ceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
.+..+ +.++|++.+. ..+++++|.|||+||++|+.+.|.++++++++++++.|+.||++++++++++|+|.++|+.
T Consensus 5 ~v~~l-~~~~~~~~~~---~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~ 80 (111)
T 3gnj_A 5 SLEKL-DTNTFEQLIY---DEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEESFGFYYVDVEEEKTLFQRFSLKGVPQI 80 (111)
T ss_dssp CSEEC-CHHHHHHHHT---TSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHTTCCSSCEE
T ss_pred cceec-CHHHHHHHHH---hcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCceEEEEEECCcChhHHHhcCCCcCCEE
Confidence 45566 5778999884 3689999999999999999999999999999987799999999999999999999999864
No 19
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.72 E-value=2.2e-17 Score=112.76 Aligned_cols=78 Identities=19% Similarity=0.269 Sum_probs=65.7
Q ss_pred eEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhc-CCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFD-TKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~-~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
+..+++.++|++++.. ...+++++|+|||+||++|+.+.|.++++++++. +++.|+.||++++++++++|+|.++|+.
T Consensus 2 v~~i~~~~~~~~~~~~-~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 80 (112)
T 3d6i_A 2 VIEINDQEQFTYLTTT-AAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADENSEISELFEISAVPYF 80 (112)
T ss_dssp EEEECCHHHHHHHHTT-TTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred ccccCCHHHHHHHHhc-ccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccCHHHHHHcCCCcccEE
Confidence 4677877899999842 1248999999999999999999999999999852 3599999999999999999999999975
No 20
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.72 E-value=1.1e-17 Score=132.00 Aligned_cols=77 Identities=22% Similarity=0.408 Sum_probs=68.5
Q ss_pred ceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
.++.++ .++|++++.. ..+++|+|+|||+||+||+.+.|.++++++++++++.|++||++++++++.+|+|.++|+.
T Consensus 8 ~v~~~~-~~~f~~~~~~--~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 84 (287)
T 3qou_A 8 NIVNIN-ESNLQQVLEQ--SMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDAEQMIAAQFGLRAIPTV 84 (287)
T ss_dssp TEEECC-TTTHHHHHTT--TTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSSSEEEEEETTTCHHHHHTTTCCSSSEE
T ss_pred ccEECC-HHHHHHHHHh--cCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCCeEEEEEeCccCHHHHHHcCCCCCCeE
Confidence 456665 5689998842 2489999999999999999999999999999987899999999999999999999999975
No 21
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.71 E-value=4.7e-17 Score=111.56 Aligned_cols=79 Identities=19% Similarity=0.384 Sum_probs=72.2
Q ss_pred ceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
.+..+.+.++|++.+..+...+++++|.||++||++|+.+.|.+++++++++ ++.|+.+|++++++++++|++.++|+.
T Consensus 7 ~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~ 85 (118)
T 2vm1_A 7 AVIACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP-GAIFLKVDVDELKDVAEAYNVEAMPTF 85 (118)
T ss_dssp CEEECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSHHHHHHTTCCSBSEE
T ss_pred ceEEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC-CcEEEEEEcccCHHHHHHcCCCcCcEE
Confidence 4678888999999997655568999999999999999999999999999987 599999999999999999999999875
No 22
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.71 E-value=7.4e-17 Score=108.42 Aligned_cols=77 Identities=23% Similarity=0.475 Sum_probs=69.2
Q ss_pred eEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
+..+++.++|++.+.. ..+++++|.||++||++|+.+.|.++++++++++++.++.+|++++++++++|++.++|+.
T Consensus 2 v~~l~~~~~~~~~l~~--~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~ 78 (106)
T 1xwb_A 2 VYQVKDKADLDGQLTK--ASGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECEDIAMEYNISSMPTF 78 (106)
T ss_dssp EEECCSHHHHHHHHHH--HTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred ceecCCHHHHHHHHHh--cCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCCCeEEEEEeccchHHHHHHcCCCcccEE
Confidence 4567776899999863 3789999999999999999999999999999966799999999999999999999999874
No 23
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.71 E-value=5.8e-17 Score=110.28 Aligned_cols=79 Identities=20% Similarity=0.408 Sum_probs=72.4
Q ss_pred ceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
.+..+.+.++|++.+..+...+++++|.||++||++|+.+.|.+++++++++ ++.|+.+|++++++++++|++.++|+.
T Consensus 5 ~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~~~~~~~~~~~v~~~Pt~ 83 (113)
T 1ti3_A 5 QVIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP-NVTFLKVDVDELKAVAEEWNVEAMPTF 83 (113)
T ss_dssp CEEEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS-SEEEEEEETTTCHHHHHHHHCSSTTEE
T ss_pred ceeEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC-CcEEEEEEccccHHHHHhCCCCcccEE
Confidence 4778888999999998665579999999999999999999999999999987 599999999999999999999999874
No 24
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.71 E-value=3.1e-17 Score=123.27 Aligned_cols=77 Identities=14% Similarity=0.113 Sum_probs=67.0
Q ss_pred ceEecCChhhHHHHHHHhhcCCCcEEEEEeC-------CCChhHHhhhHHHHHHHHHhc-----CCeEEEEEECCCCHHH
Q 031608 76 ELEPINDSDHLDQILLRAQELSQPILIDWMA-------SWCRKCIYLKPKLEKLAAEFD-----TKLKFYYVDVNKVSKD 143 (156)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A-------~WC~~Ck~~~p~l~~la~~~~-----~~v~~~~vd~d~~~~l 143 (156)
.++.++ .++|++++.. ..+.++||+||| +||++|+.+.|.|+++++++. +++.|++||+|+++++
T Consensus 19 ~vi~lt-~~nF~~~v~~--~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~~~l 95 (178)
T 3ga4_A 19 GVITVT-ADNYPLLSRG--VPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNEVPQL 95 (178)
T ss_dssp SEEECC-TTTHHHHTTC--CTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTCHHH
T ss_pred CCEECC-HHHHHHHHcc--cCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECccCHHH
Confidence 467775 5589998741 236689999999 499999999999999999987 6899999999999999
Q ss_pred HHHhCCccceec
Q 031608 144 LVKRGNISVSIQ 155 (156)
Q Consensus 144 ~~~~~i~sv~~~ 155 (156)
+++|||+++|+-
T Consensus 96 a~~~~I~siPtl 107 (178)
T 3ga4_A 96 VKDLKLQNVPHL 107 (178)
T ss_dssp HHHTTCCSSCEE
T ss_pred HHHcCCCCCCEE
Confidence 999999999974
No 25
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.71 E-value=4.4e-17 Score=114.82 Aligned_cols=74 Identities=22% Similarity=0.363 Sum_probs=68.1
Q ss_pred eEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
+..+++.++|++++ ..++++||+|||+||++|+.+.|.|++++++++ ++.|+.||++++++++++|+|.++|+.
T Consensus 21 v~~l~~~~~f~~~~----~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-~v~~~~vd~d~~~~l~~~~~v~~~Pt~ 94 (125)
T 1r26_A 21 VVDVYSVEQFRNIM----SEDILTVAWFTAVWCGPCKTIERPMEKIAYEFP-TVKFAKVDADNNSEIVSKCRVLQLPTF 94 (125)
T ss_dssp CEEECCHHHHHHHH----HSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT-TSEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred eEECCCHHHHHHHH----ccCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC-CCEEEEEECCCCHHHHHHcCCCcccEE
Confidence 57788768999998 479999999999999999999999999999986 599999999999999999999999974
No 26
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.71 E-value=5.7e-17 Score=111.77 Aligned_cols=75 Identities=21% Similarity=0.486 Sum_probs=68.3
Q ss_pred eEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
+..+++.++|++.+.. ..+++++|+|||+||++|+.+.|.++++++++ ++.++.||++++++++++|+|.++|+.
T Consensus 15 v~~l~~~~~~~~~l~~--~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 89 (117)
T 2xc2_A 15 LIELKQDGDLESLLEQ--HKNKLVVVDFFATWCGPCKTIAPLFKELSEKY--DAIFVKVDVDKLEETARKYNISAMPTF 89 (117)
T ss_dssp EEECCSTTHHHHHHHH--TTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS--SSEEEEEETTTSHHHHHHTTCCSSSEE
T ss_pred eEEeCCHHHHHHHHHh--CCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc--CcEEEEEECCccHHHHHHcCCCccceE
Confidence 6788877899999863 37899999999999999999999999999988 599999999999999999999999874
No 27
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.71 E-value=4e-17 Score=110.07 Aligned_cols=73 Identities=21% Similarity=0.428 Sum_probs=66.4
Q ss_pred EecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 78 EPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 78 ~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
..+ +.++|++++. ++++++|+|||+||++|+.+.|.++++++.+++++.|+.+|++++++++++|+|.++|+.
T Consensus 7 ~~l-~~~~~~~~~~----~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~~~Pt~ 79 (109)
T 3tco_A 7 LVL-TEENFDEVIR----NNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVDENQKIADKYSVLNIPTT 79 (109)
T ss_dssp EEC-CTTTHHHHHH----HSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred EEe-cHHHHHHHHh----cCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCCceEEEEccccCHHHHHhcCcccCCEE
Confidence 344 5678999985 489999999999999999999999999999987899999999999999999999999874
No 28
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.70 E-value=8e-17 Score=108.40 Aligned_cols=73 Identities=22% Similarity=0.489 Sum_probs=65.2
Q ss_pred EecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 78 EPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 78 ~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
..++ .++|++++ ..+++++|.||++||++|+.+.|.++++++++++++.++.+|++++++++++|+|.++|+.
T Consensus 3 ~~l~-~~~~~~~~----~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~~Pt~ 75 (105)
T 1nsw_A 3 MTLT-DANFQQAI----QGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSIPTL 75 (105)
T ss_dssp EEEC-TTTHHHHH----SSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTTCEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred eecc-HHhHHHHH----hCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCcEEEEEECcCCHHHHHHcCCccccEE
Confidence 4555 45788777 5789999999999999999999999999999987799999999999999999999999874
No 29
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.70 E-value=9.1e-17 Score=107.62 Aligned_cols=76 Identities=24% Similarity=0.504 Sum_probs=68.3
Q ss_pred eEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
+..+++.++|++.+.. ..+++++|.||++||++|+.+.|.+++++++++ ++.|+.+|++++++++++|++.++|+.
T Consensus 1 v~~i~~~~~~~~~l~~--~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~ 76 (104)
T 2vim_A 1 MRVLATAADLEKLINE--NKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP-EVEFAKVDVDQNEEAAAKYSVTAMPTF 76 (104)
T ss_dssp CEECCSHHHHHHHHHT--TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred CeecCCHHHHHHHHHh--cCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC-CCEEEEEeccCCHHHHHHcCCccccEE
Confidence 3567777899999953 368999999999999999999999999999987 699999999999999999999999874
No 30
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.70 E-value=8.3e-17 Score=116.61 Aligned_cols=78 Identities=17% Similarity=0.347 Sum_probs=70.3
Q ss_pred cceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCcccee
Q 031608 75 VELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSI 154 (156)
Q Consensus 75 ~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~ 154 (156)
..+..+++.++|++++.. ..++++||+|||+||++|+.+.|.|++++++++ ++.|+.||++++++++++|+|.++|+
T Consensus 12 ~~v~~l~~~~~~~~~~~~--~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt 88 (153)
T 2wz9_A 12 AAVEEVGSAGQFEELLRL--KAKSLLVVHFWAPWAPQCAQMNEVMAELAKELP-QVSFVKLEAEGVPEVSEKYEISSVPT 88 (153)
T ss_dssp CCSEEECSHHHHHHHHHH--TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSHHHHHHTTCCSSSE
T ss_pred CCeEEcCCHHHHHHHHHh--cCCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC-CeEEEEEECCCCHHHHHHcCCCCCCE
Confidence 457888888899999963 238999999999999999999999999999986 59999999999999999999999987
Q ss_pred c
Q 031608 155 Q 155 (156)
Q Consensus 155 ~ 155 (156)
.
T Consensus 89 ~ 89 (153)
T 2wz9_A 89 F 89 (153)
T ss_dssp E
T ss_pred E
Confidence 5
No 31
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.70 E-value=9.1e-17 Score=111.66 Aligned_cols=75 Identities=25% Similarity=0.396 Sum_probs=66.5
Q ss_pred eEecC-ChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 77 LEPIN-DSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 77 ~~~i~-~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
+..+. +.++|++.+. +++++++|+|||+||++|+.+.|.|+++++++ +++.|+.||++++++++++|+|.++|+.
T Consensus 5 v~~~~g~~~~~~~~~~---~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~~v~~~~vd~~~~~~~~~~~~i~~~Pt~ 80 (118)
T 2f51_A 5 IVHFNGTHEALLNRIK---EAPGLVLVDFFATWCGPCQRLGQILPSIAEAN-KDVTFIKVDVDKNGNAADAYGVSSIPAL 80 (118)
T ss_dssp SEEECSCHHHHHHHHH---HCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred ceEecCCHHHHHHHHH---hCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-CCeEEEEEECCCCHHHHHhcCCCCCCEE
Confidence 45665 6778886554 46899999999999999999999999999998 5699999999999999999999999875
No 32
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.70 E-value=5.6e-17 Score=113.42 Aligned_cols=76 Identities=17% Similarity=0.329 Sum_probs=67.3
Q ss_pred ceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
.+..++ .++|++.+. ..+++++|+|||+||++|+.+.|.++++++++++.+.|+.||++++++++++|+|.++|+.
T Consensus 18 ~v~~l~-~~~f~~~~~---~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~ 93 (130)
T 2dml_A 18 DVIELT-PSNFNREVI---QSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVNADKHQSLGGQYGVQGFPTI 93 (130)
T ss_dssp SSEECC-TTTHHHHTT---TCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHHTCCSSSEE
T ss_pred CcEECC-HHHHHHHHh---cCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCceEEEEEeCCCCHHHHHHcCCCccCEE
Confidence 456665 468888654 4689999999999999999999999999999987799999999999999999999999874
No 33
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.70 E-value=9.8e-17 Score=111.28 Aligned_cols=76 Identities=24% Similarity=0.450 Sum_probs=67.8
Q ss_pred eEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
...+.+.++|++.+. ..++++||+||++||++|+.+.|.|+++++++.+++.|+.||++++++++++|+|.++|+.
T Consensus 14 ~~~~~~~~~f~~~v~---~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~ 89 (119)
T 1w4v_A 14 TFNIQDGPDFQDRVV---NSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTDLAIEYEVSAVPTV 89 (119)
T ss_dssp EEECCSHHHHHHHTT---TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEETTTTHHHHHHTTCCSSSEE
T ss_pred EEEecChhhHHHHHH---cCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCCCCHHHHHHcCCCcccEE
Confidence 455566788988764 4689999999999999999999999999999977799999999999999999999999874
No 34
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.69 E-value=7.7e-17 Score=114.35 Aligned_cols=79 Identities=23% Similarity=0.417 Sum_probs=67.7
Q ss_pred ceEecCChhhHHHHHHHhhc--------CCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHh
Q 031608 76 ELEPINDSDHLDQILLRAQE--------LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKR 147 (156)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~--------~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~ 147 (156)
.+..++ .++|++.+..... .++++||+|||+||++|+.+.|.++++++++++++.|+.||++++++++++|
T Consensus 23 ~v~~l~-~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 101 (141)
T 3hxs_A 23 GTIHLT-RAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVDKEPELARDF 101 (141)
T ss_dssp CCEECC-HHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHT
T ss_pred Cccccc-HHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCceEEEEEECCCCHHHHHHc
Confidence 456664 6688888742100 4899999999999999999999999999999878999999999999999999
Q ss_pred CCccceec
Q 031608 148 GNISVSIQ 155 (156)
Q Consensus 148 ~i~sv~~~ 155 (156)
+|.++|+.
T Consensus 102 ~v~~~Pt~ 109 (141)
T 3hxs_A 102 GIQSIPTI 109 (141)
T ss_dssp TCCSSSEE
T ss_pred CCCCcCEE
Confidence 99999874
No 35
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.69 E-value=2.6e-17 Score=116.97 Aligned_cols=76 Identities=16% Similarity=0.284 Sum_probs=67.5
Q ss_pred ceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
.+..+++.++|++++.. ..++++||+|||+||++|+.+.|.|+++++++ ++.|+.||++++++++++|+|.++|+.
T Consensus 21 ~v~~l~~~~~~~~~l~~--~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~ 96 (133)
T 3cxg_A 21 IYIELKNTGSLNQVFSS--TQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY--YVTLVDIDVDIHPKLNDQHNIKALPTF 96 (133)
T ss_dssp EEEECCCTTHHHHHHTC---CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE--ECEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred cEEEecChhHHHHHHHh--cCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc--CEEEEEEeccchHHHHHhcCCCCCCEE
Confidence 46788888899999853 34789999999999999999999999998877 499999999999999999999999875
No 36
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.69 E-value=1.4e-16 Score=108.74 Aligned_cols=77 Identities=25% Similarity=0.381 Sum_probs=66.9
Q ss_pred cceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECC-CCHHHHHHhCCccce
Q 031608 75 VELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVN-KVSKDLVKRGNISVS 153 (156)
Q Consensus 75 ~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d-~~~~l~~~~~i~sv~ 153 (156)
..+..+++ ++|++.+.. ..+++++|+|||+||++|+.+.|.++++++++++ +.|+.||++ ++++++++|+|.++|
T Consensus 5 ~~v~~l~~-~~~~~~~~~--~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~-v~~~~vd~~~~~~~~~~~~~v~~~P 80 (111)
T 2pu9_C 5 GKVTEVNK-DTFWPIVKA--AGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLD-VIFLKLDCNQENKTLAKELGIRVVP 80 (111)
T ss_dssp TSEEEECT-TTHHHHHTT--CTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEECSSTTHHHHHHHCCSBSS
T ss_pred CccEEech-HHHHHHHHh--cCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCCC-eEEEEEecCcchHHHHHHcCCCeee
Confidence 34667764 689888842 2589999999999999999999999999999984 999999998 799999999999998
Q ss_pred ec
Q 031608 154 IQ 155 (156)
Q Consensus 154 ~~ 155 (156)
+.
T Consensus 81 t~ 82 (111)
T 2pu9_C 81 TF 82 (111)
T ss_dssp EE
T ss_pred EE
Confidence 74
No 37
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.69 E-value=1.1e-16 Score=108.09 Aligned_cols=75 Identities=27% Similarity=0.563 Sum_probs=66.1
Q ss_pred eEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
+..++ .++|++.+. ..+++++|.||++||++|+.+.|.++++++++++++.++.+|++++++++++|+|.++|+.
T Consensus 3 v~~l~-~~~~~~~~~---~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~ 77 (107)
T 1dby_A 3 AGAVN-DDTFKNVVL---ESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPNVASEYGIRSIPTI 77 (107)
T ss_dssp CEEEC-HHHHHHHTT---TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHHTCCSSCEE
T ss_pred cEecc-HHHHHHHHh---cCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCceEEEEEECCCCHHHHHHCCCCcCCEE
Confidence 34454 567887664 4689999999999999999999999999999987799999999999999999999999874
No 38
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.69 E-value=7.2e-17 Score=111.72 Aligned_cols=75 Identities=20% Similarity=0.339 Sum_probs=65.6
Q ss_pred eEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
+..++ .++|++.+. ..+++++|+|||+||++|+.+.|.++++++.+++++.|+.||++++++++++|+|.++|+.
T Consensus 5 v~~l~-~~~f~~~~~---~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 79 (122)
T 3aps_A 5 SIDLT-PQTFNEKVL---QGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDCQAYPQTCQKAGIKAYPSV 79 (122)
T ss_dssp SEECC-HHHHHHHTT---TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred hhcCC-HHHHHHHHh---cCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCcCCHHHHHHcCCCccceE
Confidence 45565 567755443 5789999999999999999999999999999987799999999999999999999999874
No 39
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.69 E-value=4.9e-17 Score=113.26 Aligned_cols=81 Identities=23% Similarity=0.409 Sum_probs=72.8
Q ss_pred CCCccceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCC-eEEEEEECCCCHHHHHHhCC
Q 031608 71 RPTSVELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTK-LKFYYVDVNKVSKDLVKRGN 149 (156)
Q Consensus 71 ~p~~~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~-v~~~~vd~d~~~~l~~~~~i 149 (156)
.+....+..|++.++|++++ ..+++++|.||++||++|+.+.|.++++++.+++. +.|+.||++++++++++|+|
T Consensus 11 ~~~~~~~~~i~~~~~f~~~l----~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~~~~~~~~~v 86 (121)
T 2j23_A 11 LVPRGSVQVISSYDQFKQVT----GGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQSQIAQEVGI 86 (121)
T ss_dssp CCCCCCEEECCSHHHHHHHH----SSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTCHHHHHHHTC
T ss_pred ccCCcceEEcCCHHHHHHHH----cCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCCHHHHHHcCC
Confidence 34445688999999999999 57999999999999999999999999999988754 99999999999999999999
Q ss_pred ccceec
Q 031608 150 ISVSIQ 155 (156)
Q Consensus 150 ~sv~~~ 155 (156)
.++|+.
T Consensus 87 ~~~Pt~ 92 (121)
T 2j23_A 87 RAMPTF 92 (121)
T ss_dssp CSSSEE
T ss_pred CcccEE
Confidence 999875
No 40
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.68 E-value=8.3e-17 Score=113.91 Aligned_cols=75 Identities=19% Similarity=0.374 Sum_probs=67.0
Q ss_pred ceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCC---eEEEEEECCCCHHHHHHhCCccc
Q 031608 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTK---LKFYYVDVNKVSKDLVKRGNISV 152 (156)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~---v~~~~vd~d~~~~l~~~~~i~sv 152 (156)
.+..++ .++|++++ ..++++||+|||+||++|+.+.|.|+++++++.+. +.|+.||++++.+++++|+|.++
T Consensus 18 ~v~~l~-~~~~~~~~----~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~ 92 (140)
T 2dj1_A 18 GVWVLN-DGNFDNFV----ADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDVSGY 92 (140)
T ss_dssp TEEECC-TTTHHHHH----TTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCHHHHHHTTCCSS
T ss_pred CCEEcC-hHhHHHHH----hcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccHHHHHHCCCCcc
Confidence 466664 66899888 46899999999999999999999999999998754 99999999999999999999999
Q ss_pred eec
Q 031608 153 SIQ 155 (156)
Q Consensus 153 ~~~ 155 (156)
|+.
T Consensus 93 Pt~ 95 (140)
T 2dj1_A 93 PTI 95 (140)
T ss_dssp SEE
T ss_pred CeE
Confidence 874
No 41
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.68 E-value=1.5e-16 Score=106.86 Aligned_cols=74 Identities=24% Similarity=0.412 Sum_probs=66.6
Q ss_pred ceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
.+..++ .++|++.+ .+++++|+|||+||++|+.+.|.++++++++++++.++.+|++++++++++|+|.++|+.
T Consensus 4 ~v~~l~-~~~~~~~~-----~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~ 77 (106)
T 3die_A 4 AIVKVT-DADFDSKV-----ESGVQLVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTL 77 (106)
T ss_dssp CCEECC-TTTHHHHS-----CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSBSEE
T ss_pred ceEECC-HHHHHHHh-----cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCCcEEEEEECCcCHHHHHhCCCcccCEE
Confidence 355664 56888887 589999999999999999999999999999987799999999999999999999999874
No 42
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.68 E-value=1.2e-16 Score=108.11 Aligned_cols=75 Identities=24% Similarity=0.498 Sum_probs=66.0
Q ss_pred eEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
+..++ .++|++.+. ..+++++|+||++||++|+.+.|.++++++++++++.++.+|++++++++++|+|.++|+.
T Consensus 4 v~~l~-~~~f~~~~~---~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~ 78 (108)
T 2trx_A 4 IIHLT-DDSFDTDVL---KADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTL 78 (108)
T ss_dssp EEECC-TTTHHHHTT---TCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCTTHHHHTTCCSSSEE
T ss_pred ceecc-hhhHHHHHH---hcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCCcEEEEEECCCCHHHHHHcCCcccCEE
Confidence 45565 457876653 4789999999999999999999999999999987799999999999999999999999874
No 43
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.68 E-value=9.4e-17 Score=113.94 Aligned_cols=77 Identities=18% Similarity=0.364 Sum_probs=67.0
Q ss_pred ceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcC-CeEEEEEECCCCHHHHHHhCCc----
Q 031608 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVNKVSKDLVKRGNI---- 150 (156)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~-~v~~~~vd~d~~~~l~~~~~i~---- 150 (156)
.+..++ .++|++.+.. ..+++++|+|||+||++|+.+.|.|+++++++.+ ++.|+.||++++++++++|+|.
T Consensus 8 ~v~~l~-~~~f~~~~~~--~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~~~ 84 (137)
T 2dj0_A 8 YIKYFN-DKTIDEELER--DKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYTDVSTRYKVSTSPL 84 (137)
T ss_dssp CCEECC-TTHHHHHHHH--STTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTCHHHHHHTTCCCCSS
T ss_pred eEEEcc-HhhHHHHHhc--CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccCHHHHHHccCcccCC
Confidence 355565 5689998864 4556999999999999999999999999999975 7999999999999999999998
Q ss_pred --cceec
Q 031608 151 --SVSIQ 155 (156)
Q Consensus 151 --sv~~~ 155 (156)
++|+.
T Consensus 85 ~~~~Pt~ 91 (137)
T 2dj0_A 85 TKQLPTL 91 (137)
T ss_dssp SSCSSEE
T ss_pred cCCCCEE
Confidence 88864
No 44
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.68 E-value=1.3e-16 Score=108.67 Aligned_cols=75 Identities=29% Similarity=0.639 Sum_probs=65.2
Q ss_pred eEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
+..+++ ++|++.+. ..+++++|+|||+||++|+.+.|.++++++++++++.++.+|++++++++++|+|.++|+.
T Consensus 7 v~~l~~-~~~~~~~~---~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~ 81 (112)
T 1t00_A 7 LKHVTD-DSFEQDVL---KNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENPGTAAKYGVMSIPTL 81 (112)
T ss_dssp CEEECT-TTHHHHTT---TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred EEecch-hhHHHHHh---hCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCCeEEEEEEcCCCHHHHHhCCCCcccEE
Confidence 455654 46766553 4689999999999999999999999999999977799999999999999999999999874
No 45
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.68 E-value=1.3e-16 Score=111.72 Aligned_cols=76 Identities=21% Similarity=0.391 Sum_probs=66.8
Q ss_pred ceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhc----CCeEEEEEECCCCHHHHHHhCCcc
Q 031608 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFD----TKLKFYYVDVNKVSKDLVKRGNIS 151 (156)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~----~~v~~~~vd~d~~~~l~~~~~i~s 151 (156)
.+..++ .++|++.+. ..++++||+|||+||++|+.+.|.++++++++. +++.|+.||++++++++++|+|.+
T Consensus 8 ~v~~l~-~~~~~~~~~---~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~ 83 (133)
T 1x5d_A 8 DVIELT-DDSFDKNVL---DSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGIRG 83 (133)
T ss_dssp SCEECC-TTHHHHHTT---TSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCCHHHHHHTCCS
T ss_pred cCEEcC-HhhHHHHHh---cCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCHHHHHhCCCCe
Confidence 456665 458888764 468999999999999999999999999999987 679999999999999999999999
Q ss_pred ceec
Q 031608 152 VSIQ 155 (156)
Q Consensus 152 v~~~ 155 (156)
+|+.
T Consensus 84 ~Pt~ 87 (133)
T 1x5d_A 84 FPTI 87 (133)
T ss_dssp SSEE
T ss_pred eCeE
Confidence 9874
No 46
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.68 E-value=5.1e-17 Score=114.34 Aligned_cols=75 Identities=19% Similarity=0.333 Sum_probs=67.2
Q ss_pred CChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHH--HHHHHhcCCeEEEEEEC---CCCHHHHHHhCC---ccc
Q 031608 81 NDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLE--KLAAEFDTKLKFYYVDV---NKVSKDLVKRGN---ISV 152 (156)
Q Consensus 81 ~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~--~la~~~~~~v~~~~vd~---d~~~~l~~~~~i---~sv 152 (156)
.+.+++++.+..+...++++||+|||+||++|+.+.|.|+ ++++.+.+++.++.||+ +++++++++|+| .++
T Consensus 13 ~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~ 92 (133)
T 3fk8_A 13 DAWTQVKKALAAGKRTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKHFEVVKIDVGNFDRNLELSQAYGDPIQDGI 92 (133)
T ss_dssp CHHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHHCEEEEEECTTTTSSHHHHHHTTCGGGGCS
T ss_pred ChHhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCCEEEEEEeCCcccchHHHHHHhCCccCCcc
Confidence 4456788888776678999999999999999999999999 99998866799999999 899999999999 998
Q ss_pred eec
Q 031608 153 SIQ 155 (156)
Q Consensus 153 ~~~ 155 (156)
|+.
T Consensus 93 Pt~ 95 (133)
T 3fk8_A 93 PAV 95 (133)
T ss_dssp SEE
T ss_pred ceE
Confidence 875
No 47
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.68 E-value=1.8e-16 Score=109.21 Aligned_cols=77 Identities=25% Similarity=0.447 Sum_probs=66.6
Q ss_pred cceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCcccee
Q 031608 75 VELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSI 154 (156)
Q Consensus 75 ~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~ 154 (156)
..+..+++ ++|++.+. ..+++++|.||++||++|+.+.|.++++++++++++.|+.||++++++++++|+|.++|+
T Consensus 12 ~~v~~l~~-~~~~~~~~---~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~~~Pt 87 (121)
T 2i1u_A 12 SATIKVTD-ASFATDVL---SSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPT 87 (121)
T ss_dssp CCSEECCT-TTHHHHTT---TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSE
T ss_pred ccceecCH-HHHHHHHH---hCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHhcCCCcCCE
Confidence 34566664 46765543 468999999999999999999999999999998779999999999999999999999987
Q ss_pred c
Q 031608 155 Q 155 (156)
Q Consensus 155 ~ 155 (156)
.
T Consensus 88 ~ 88 (121)
T 2i1u_A 88 L 88 (121)
T ss_dssp E
T ss_pred E
Confidence 4
No 48
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.67 E-value=1.4e-16 Score=109.18 Aligned_cols=73 Identities=25% Similarity=0.404 Sum_probs=65.3
Q ss_pred eEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
+..++ .++|++.+ .+++++|+|||+||++|+.+.|.++++++++++++.|+.||++++++++++|+|.++|+.
T Consensus 3 v~~l~-~~~~~~~~-----~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~ 75 (112)
T 2voc_A 3 IVKAT-DQSFSAET-----SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGVMSIPTL 75 (112)
T ss_dssp CEECC-TTTHHHHH-----SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTTTCEEEEEETTTCCSHHHHTTCCSBSEE
T ss_pred eEEec-HHHHHHHh-----CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCcEEEEEECCCCHHHHHHcCCCcccEE
Confidence 34555 45788887 489999999999999999999999999999987799999999999999999999999874
No 49
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.67 E-value=5.9e-17 Score=113.99 Aligned_cols=75 Identities=21% Similarity=0.249 Sum_probs=60.7
Q ss_pred ceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
.+.+|+ .++|.+.+..+ ..+++++|+|||+||++|+.+.|.|++++++|+ ++.|++||+++. +.+|+|.++|+.
T Consensus 4 ~v~~it-~~~f~~~v~~~-~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~-~v~f~kvd~d~~---~~~~~v~~~PT~ 77 (118)
T 3evi_A 4 ELREIS-GNQYVNEVTNA-EEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFP-ETKFVKAIVNSC---IQHYHDNCLPTI 77 (118)
T ss_dssp SCEECC-GGGHHHHTTTC-CTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCT-TSEEEEEEGGGT---STTCCGGGCSEE
T ss_pred ceEEeC-HHHHHHHHHhc-CCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCC-CCEEEEEEhHHh---HHHCCCCCCCEE
Confidence 356674 56777766420 113499999999999999999999999999997 499999999986 588999999975
Q ss_pred C
Q 031608 156 I 156 (156)
Q Consensus 156 ~ 156 (156)
+
T Consensus 78 ~ 78 (118)
T 3evi_A 78 F 78 (118)
T ss_dssp E
T ss_pred E
Confidence 3
No 50
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.67 E-value=2.2e-16 Score=113.30 Aligned_cols=75 Identities=25% Similarity=0.422 Sum_probs=67.5
Q ss_pred ceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
.+..++ .++|++.+ ..+++++|+|||+||++|+.+.|.|+++++++.+++.|+.||++++++++++|+|.++|+.
T Consensus 39 ~v~~l~-~~~~~~~~----~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~ 113 (148)
T 3p2a_A 39 EVINAT-AETLDKLL----QDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGKVRFVKVNTEAEPALSTRFRIRSIPTI 113 (148)
T ss_dssp CCEECC-TTTHHHHT----TCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred CceecC-HHHHHHHH----hcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCceEEEEEECcCCHHHHHHCCCCccCEE
Confidence 345554 56898888 5799999999999999999999999999999987899999999999999999999999874
No 51
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.67 E-value=4.3e-16 Score=110.50 Aligned_cols=79 Identities=24% Similarity=0.438 Sum_probs=67.2
Q ss_pred ceEecCChhhHHHHHHHhh--------cCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHh
Q 031608 76 ELEPINDSDHLDQILLRAQ--------ELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKR 147 (156)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~--------~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~ 147 (156)
.+..++ .++|++.+.... ..+++++|+|||+||++|+.+.|.|+++++++++++.|+.||++++++++++|
T Consensus 10 ~v~~l~-~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~ 88 (136)
T 2l5l_A 10 KVIHLT-KAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQIVIYKVDTEKEQELAGAF 88 (136)
T ss_dssp SEEEEC-HHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHT
T ss_pred ceEEec-chHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHc
Confidence 456665 568888773210 14789999999999999999999999999999877999999999999999999
Q ss_pred CCccceec
Q 031608 148 GNISVSIQ 155 (156)
Q Consensus 148 ~i~sv~~~ 155 (156)
+|.++|+.
T Consensus 89 ~v~~~Pt~ 96 (136)
T 2l5l_A 89 GIRSIPSI 96 (136)
T ss_dssp TCCSSCEE
T ss_pred CCCCCCEE
Confidence 99999874
No 52
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.67 E-value=1.6e-16 Score=115.82 Aligned_cols=74 Identities=18% Similarity=0.360 Sum_probs=67.0
Q ss_pred eEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
...++ .++|++.+ ..++++||+|||+||++|+.+.|.|+++++++.+++.|++||++++++++++|+|.++|+.
T Consensus 49 ~~~l~-~~~f~~~~----~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~ 122 (155)
T 2ppt_A 49 VAGID-PAILARAE----RDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQVRLAKIDTQAHPAVAGRHRIQGIPAF 122 (155)
T ss_dssp EEECC-HHHHHHHT----TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTSTHHHHHTTCCSSSEE
T ss_pred CccCC-HHHHHHHH----hCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCCEEEEEEeCCccHHHHHHcCCCcCCEE
Confidence 45554 67888888 4789999999999999999999999999999987799999999999999999999999874
No 53
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.67 E-value=4.5e-16 Score=108.09 Aligned_cols=76 Identities=26% Similarity=0.449 Sum_probs=66.4
Q ss_pred ceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECC-CCHHHHHHhCCcccee
Q 031608 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVN-KVSKDLVKRGNISVSI 154 (156)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d-~~~~l~~~~~i~sv~~ 154 (156)
.+..++ .++|++.+.. ..+++++|+|||+||++|+.+.|.++++++++++ +.++.+|++ ++++++++|+|.++|+
T Consensus 19 ~v~~l~-~~~~~~~~~~--~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~-~~~~~vd~~~~~~~~~~~~~v~~~Pt 94 (124)
T 1faa_A 19 KVTEVN-KDTFWPIVKA--AGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLD-VIFLKLDCNQENKTLAKELGIRVVPT 94 (124)
T ss_dssp SEEEEC-TTTHHHHHHH--TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEECSSTTHHHHHHHCCSSSSE
T ss_pred ceEEec-chhHHHHHHh--cCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCCC-CEEEEEecCcchHHHHHHcCCCeeeE
Confidence 456665 4588888853 3689999999999999999999999999999874 999999998 6899999999999997
Q ss_pred c
Q 031608 155 Q 155 (156)
Q Consensus 155 ~ 155 (156)
.
T Consensus 95 ~ 95 (124)
T 1faa_A 95 F 95 (124)
T ss_dssp E
T ss_pred E
Confidence 4
No 54
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.67 E-value=1.9e-16 Score=112.99 Aligned_cols=76 Identities=14% Similarity=0.259 Sum_probs=66.9
Q ss_pred ceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
.+..++ .++|++.+. ..++++||+|||+||++|+.+.|.|+++++.+++++.|+.||++++++++++|+|.++|+.
T Consensus 7 ~v~~l~-~~~f~~~~~---~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~ 82 (140)
T 3hz4_A 7 SIIEFE-DMTWSQQVE---DSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSSAVFGRINIATNPWTAEKYGVQGTPTF 82 (140)
T ss_dssp TEEEEC-HHHHHHHTT---TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTTCHHHHHHHTCCEESEE
T ss_pred ceEEcc-hHhHHHHHH---hCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECCcCHhHHHHCCCCcCCEE
Confidence 456665 567874443 5699999999999999999999999999999987899999999999999999999999874
No 55
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.67 E-value=1.2e-16 Score=122.46 Aligned_cols=76 Identities=24% Similarity=0.494 Sum_probs=67.1
Q ss_pred ceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
....+ +.++|++.+. .++++++|+|||+||++|+.+.|.|+++++++++++.|+.||++++++++++|+|.++|+.
T Consensus 13 ~~~~l-t~~~f~~~v~---~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~ 88 (222)
T 3dxb_A 13 KIIHL-TDDSFDTDVL---KADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTL 88 (222)
T ss_dssp CCEEC-CTTTHHHHHT---TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCTTTGGGGTCCSBSEE
T ss_pred CceeC-CHHHHHHHHH---hcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHcCCCcCCEE
Confidence 34444 5668888653 5799999999999999999999999999999987799999999999999999999999975
No 56
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.67 E-value=2.6e-16 Score=107.72 Aligned_cols=73 Identities=25% Similarity=0.494 Sum_probs=66.2
Q ss_pred EecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 78 EPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 78 ~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
....+.++|++++. .+++++|+|||+||++|+.+.|.+++++++++ ++.|+.||++++++++++|+|.++|+.
T Consensus 11 ~~~~~~~~f~~~~~----~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~-~v~~~~vd~~~~~~~~~~~~v~~~Pt~ 83 (112)
T 1syr_A 11 KIVTSQAEFDSIIS----QNELVIVDFFAEWCGPCKRIAPFYEECSKTYT-KMVFIKVDVDEVSEVTEKENITSMPTF 83 (112)
T ss_dssp EEECSHHHHHHHHH----HCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTTHHHHHHTTCCSSSEE
T ss_pred EEECCHHHHHHHHc----cCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC-CCEEEEEECCCCHHHHHHcCCCcccEE
Confidence 34556889999994 58999999999999999999999999999987 499999999999999999999999864
No 57
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.66 E-value=3.4e-16 Score=104.95 Aligned_cols=74 Identities=22% Similarity=0.533 Sum_probs=65.2
Q ss_pred EecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 78 EPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 78 ~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
..++ .++|++.+. ..+++++|.||++||++|+.+.|.++++++++++++.++.+|++++++++++|++.++|+.
T Consensus 3 ~~~~-~~~~~~~~~---~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~ 76 (105)
T 1fb6_A 3 QDVN-DSSWKEFVL---ESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTV 76 (105)
T ss_dssp EECC-TTTHHHHTT---TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred eech-hhhHHHHHh---cCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCceEEEEEcCcchHHHHHhCCCCcccEE
Confidence 3444 457887664 4689999999999999999999999999999987799999999999999999999999874
No 58
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.66 E-value=3.6e-16 Score=105.15 Aligned_cols=74 Identities=26% Similarity=0.491 Sum_probs=65.8
Q ss_pred eEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
+..++ .++|++++. .+++++|.||++||++|+.+.|.++++++.+++++.++.+|++++++++++|++.++|+.
T Consensus 3 v~~l~-~~~~~~~~~----~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~ 76 (109)
T 2yzu_A 3 PIEVT-DQNFDETLG----QHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGKLLVAKLDVDENPKTAMRYRVMSIPTV 76 (109)
T ss_dssp CEECC-TTTHHHHHH----HCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred ceEcc-HhHHHHHhc----CCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCceEEEEEECCCCHhHHHhCCCCcCCEE
Confidence 34554 558887774 589999999999999999999999999999987799999999999999999999999874
No 59
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.66 E-value=2.9e-16 Score=106.29 Aligned_cols=74 Identities=19% Similarity=0.294 Sum_probs=65.2
Q ss_pred ceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhc---CCeEEEEEECCCCHHHHHHhCCccc
Q 031608 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFD---TKLKFYYVDVNKVSKDLVKRGNISV 152 (156)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~---~~v~~~~vd~d~~~~l~~~~~i~sv 152 (156)
.+..++ .++|++.+. +++++|+|||+||++|+.+.|.++++++.+. .++.++.+|++++++++++|+|.++
T Consensus 6 ~v~~l~-~~~~~~~~~-----~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~ 79 (111)
T 3uvt_A 6 TVLALT-ENNFDDTIA-----EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGY 79 (111)
T ss_dssp CSEECC-TTTHHHHHH-----SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHHHHHHTTCCSS
T ss_pred cceEcC-hhhHHHHhc-----CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHhHHHhcCCCcc
Confidence 455564 668999984 7899999999999999999999999998875 3599999999999999999999999
Q ss_pred eec
Q 031608 153 SIQ 155 (156)
Q Consensus 153 ~~~ 155 (156)
|+.
T Consensus 80 Pt~ 82 (111)
T 3uvt_A 80 PTL 82 (111)
T ss_dssp SEE
T ss_pred cEE
Confidence 864
No 60
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.66 E-value=3.2e-16 Score=119.89 Aligned_cols=124 Identities=17% Similarity=0.244 Sum_probs=86.9
Q ss_pred cCCccCCCCCccccccCCceEEEeCCCccccccccchhccccCCCCCCCccceEecCChhhHHHHHHHhhcCCCcEEEEE
Q 031608 25 QQPWSSGSSSCLLLQKNSAFFWVDTASRSKSARRDVRVEALWPDLSRPTSVELEPINDSDHLDQILLRAQELSQPILIDW 104 (156)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~p~~~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F 104 (156)
...|.+.|+|++.+-+.+...-+.|..........+..... +. ..+....... .+.++|++++. .+++++|+|
T Consensus 82 ~~~~~v~~~Pt~~~~~~g~~~~~~g~~~~~~l~~~i~~~~~-~~-~~~~~~~~~~-~~~~~~~~~~~----~~~~~~v~f 154 (241)
T 3idv_A 82 ASRFDVSGYPTIKILKKGQAVDYEGSRTQEEIVAKVREVSQ-PD-WTPPPEVTLV-LTKENFDEVVN----DADIILVEF 154 (241)
T ss_dssp HHHTTCCSSSEEEEEETTEEEECCSCSCHHHHHHHHHHHHS-TT-CCCCCCSSEE-CCTTTHHHHHH----HCSEEEEEE
T ss_pred HHhcCCCcCCEEEEEcCCCcccccCcccHHHHHHHHhhccC-cc-ccccccccee-ccHHHHHHhhc----cCCeEEEEE
Confidence 34578889999987766554434333222222222221111 11 1122222333 45678999984 478999999
Q ss_pred eCCCChhHHhhhHHHHHHHHHhcC---CeEEEEEECCCCHHHHHHhCCccceec
Q 031608 105 MASWCRKCIYLKPKLEKLAAEFDT---KLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 105 ~A~WC~~Ck~~~p~l~~la~~~~~---~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
||+||++|+.+.|.++++++++.+ ++.|+.||++++++++++|+|.++|+.
T Consensus 155 ~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~ 208 (241)
T 3idv_A 155 YAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAETDLAKRFDVSGYPTL 208 (241)
T ss_dssp ECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred ECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCCHHHHHHcCCcccCEE
Confidence 999999999999999999999864 399999999999999999999999864
No 61
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.66 E-value=1.8e-16 Score=110.74 Aligned_cols=75 Identities=12% Similarity=0.114 Sum_probs=66.8
Q ss_pred ceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHH----HHHHhCCc-
Q 031608 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSK----DLVKRGNI- 150 (156)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~----l~~~~~i~- 150 (156)
.+..|++.++|++++. .+++++|+|+|+|||+|+.+.|.|++++++ + ++.|++||++++.+ ++.++||.
T Consensus 7 ~~~~i~s~e~f~~ii~----~~~~vvi~khatwCgpc~~~~~~~e~~~~~-~-~v~~~~vdVde~r~~Sn~IA~~~~V~h 80 (112)
T 3iv4_A 7 VAIKLSSIDQFEQVIE----ENKYVFVLKHSETCPISANAYDQFNKFLYE-R-DMDGYYLIVQQERDLSDYIAKKTNVKH 80 (112)
T ss_dssp CEEECCSHHHHHHHHH----HCSEEEEEEECTTCHHHHHHHHHHHHHHHH-H-TCCEEEEEGGGGHHHHHHHHHHHTCCC
T ss_pred ceeecCCHHHHHHHHh----cCCCEEEEEECCcCHhHHHHHHHHHHHhcc-C-CceEEEEEeecCchhhHHHHHHhCCcc
Confidence 5788999999999995 489999999999999999999999999985 3 59999999999866 89999999
Q ss_pred cceecC
Q 031608 151 SVSIQI 156 (156)
Q Consensus 151 sv~~~~ 156 (156)
..|+.|
T Consensus 81 ~sPq~i 86 (112)
T 3iv4_A 81 ESPQAF 86 (112)
T ss_dssp CSSEEE
T ss_pred CCCeEE
Confidence 488653
No 62
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.66 E-value=3.9e-16 Score=104.98 Aligned_cols=75 Identities=23% Similarity=0.414 Sum_probs=65.9
Q ss_pred eEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
+..++ .++|++.+. ..+++++|.||++||++|+.+.|.++++++++++++.|+.+|++++++++++|+|.++|+.
T Consensus 4 v~~l~-~~~~~~~~~---~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~ 78 (107)
T 2i4a_A 4 TLAVS-DSSFDQDVL---KASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDDNPETPNAYQVRSIPTL 78 (107)
T ss_dssp EEECC-TTTHHHHTT---TCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTSEEEEEEETTTCCHHHHHTTCCSSSEE
T ss_pred eeecc-hhhhhHHHH---hCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCCcEEEEEEECCCCHHHHHhcCCCccCEE
Confidence 45555 457876653 4789999999999999999999999999999987799999999999999999999999864
No 63
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.66 E-value=1.7e-16 Score=111.44 Aligned_cols=61 Identities=20% Similarity=0.373 Sum_probs=57.9
Q ss_pred cCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 95 ELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 95 ~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
..+++++|+|||+||++|+.+.|.++++++++++++.++.||++++++++++|+|.++|+.
T Consensus 40 ~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~ 100 (128)
T 3ul3_B 40 MKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKRIYLLKVDLDKNESLARKFSVKSLPTI 100 (128)
T ss_dssp SCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGEEEEEEEGGGCHHHHHHTTCCSSSEE
T ss_pred ccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCCCCcCEE
Confidence 4799999999999999999999999999999987799999999999999999999999875
No 64
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.65 E-value=3e-16 Score=109.74 Aligned_cols=79 Identities=14% Similarity=0.275 Sum_probs=69.4
Q ss_pred ceEecCChhhHHHHHHHhhcCCCcEEEEEeCC-------CChhHHhhhHHHHHHHHHhcCCeEEEEEEC-------CCCH
Q 031608 76 ELEPINDSDHLDQILLRAQELSQPILIDWMAS-------WCRKCIYLKPKLEKLAAEFDTKLKFYYVDV-------NKVS 141 (156)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~-------WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~-------d~~~ 141 (156)
+.+.+.+.++|++.+.. ..+++++|+|||+ ||++|+.+.|.++++++++++++.|+.||+ +.++
T Consensus 5 ~~v~~~~~~~~~~~~~~--~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~~~d~~~ 82 (123)
T 1wou_A 5 EEVSVSGFEEFHRAVEQ--HNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGCVFIYCQVGEKPYWKDPNN 82 (123)
T ss_dssp EEEEEESHHHHHHHHHT--TTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTTEEEEEEECCCHHHHHCTTC
T ss_pred eeEEeccHHHHHHHHHH--hCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCCCcEEEEEECCCchhhhchhH
Confidence 34566778899999863 2589999999999 999999999999999999977799999999 7899
Q ss_pred HHHHHhCCccceecC
Q 031608 142 KDLVKRGNISVSIQI 156 (156)
Q Consensus 142 ~l~~~~~i~sv~~~~ 156 (156)
+++++|+|.++|+.+
T Consensus 83 ~~~~~~~i~~~Pt~~ 97 (123)
T 1wou_A 83 DFRKNLKVTAVPTLL 97 (123)
T ss_dssp HHHHHHCCCSSSEEE
T ss_pred HHHHHCCCCeeCEEE
Confidence 999999999999753
No 65
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.65 E-value=5.8e-16 Score=107.93 Aligned_cols=73 Identities=19% Similarity=0.321 Sum_probs=63.9
Q ss_pred ceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcC-CeEEEEEECCCCHHHHHHhCCcccee
Q 031608 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVNKVSKDLVKRGNISVSI 154 (156)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~-~v~~~~vd~d~~~~l~~~~~i~sv~~ 154 (156)
.+..++ .++|++++ ++.++|+|||+||++|+.+.|.++++++++++ ++.|+.||++++++++++|+|.++|+
T Consensus 8 ~v~~l~-~~~f~~~~------~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt 80 (126)
T 1x5e_A 8 NVRVIT-DENWRELL------EGDWMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQPGLSGRFIINALPT 80 (126)
T ss_dssp SEEECC-TTTHHHHT------SSEEEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTCHHHHHHTTCCSSSE
T ss_pred ccEEec-HHHHHHHh------CCCEEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCCHHHHHHcCCcccCE
Confidence 466664 56898877 23499999999999999999999999999875 69999999999999999999999987
Q ss_pred c
Q 031608 155 Q 155 (156)
Q Consensus 155 ~ 155 (156)
.
T Consensus 81 ~ 81 (126)
T 1x5e_A 81 I 81 (126)
T ss_dssp E
T ss_pred E
Confidence 4
No 66
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.65 E-value=6.5e-16 Score=105.16 Aligned_cols=75 Identities=21% Similarity=0.441 Sum_probs=66.8
Q ss_pred eEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
+..++ .++|++.+. ..+++++|.||++||++|+.+.|.++++++.+++++.|+.+|++++++++++|+|.++|+.
T Consensus 9 v~~l~-~~~~~~~~~---~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~~Pt~ 83 (115)
T 1thx_A 9 VITIT-DAEFESEVL---KAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDPNPTTVKKYKVEGVPAL 83 (115)
T ss_dssp EEECC-GGGHHHHTT---TCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEESTTCHHHHHHTTCCSSSEE
T ss_pred eEEee-ccchhhHhh---cCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCcEEEEEEEcCCCHHHHHHcCCCceeEE
Confidence 56664 568887763 4789999999999999999999999999999987799999999999999999999999874
No 67
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.64 E-value=3.1e-16 Score=110.67 Aligned_cols=75 Identities=23% Similarity=0.449 Sum_probs=66.3
Q ss_pred eEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
+..++ .++|++.+. ..+++++|+|||+||++|+.+.|.++++++++++++.|+.||++++++++++|+|.++|+.
T Consensus 24 v~~l~-~~~f~~~~~---~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~ 98 (128)
T 2o8v_B 24 IIHLT-DDSFDTDVL---KADGAILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTL 98 (128)
T ss_dssp SEEEC-TTTHHHHTT---TCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTTEEEEEEETTTCCTTSGGGTCCSSSEE
T ss_pred cEecC-hhhHHHHHH---hcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCCCccCEE
Confidence 55665 557876653 5789999999999999999999999999999987799999999999999999999999874
No 68
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.64 E-value=1.2e-16 Score=111.38 Aligned_cols=80 Identities=24% Similarity=0.477 Sum_probs=72.2
Q ss_pred ceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
.+..+++.++|++.+..+...+++++|.||++||++|+.+.|.|++++++++ ++.|+.||++++++++++|+|.++|+.
T Consensus 15 ~~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~~~~~~~~~~~v~~~Pt~ 93 (130)
T 1wmj_A 15 VVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP-GAVFLKVDVDELKEVAEKYNVEAMPTF 93 (130)
T ss_dssp SSBCCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT-TBCCEECCTTTSGGGHHHHTCCSSCCC
T ss_pred ceEEcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-CCEEEEEeccchHHHHHHcCCCccceE
Confidence 4667777889999998665679999999999999999999999999999987 599999999999999999999999975
Q ss_pred C
Q 031608 156 I 156 (156)
Q Consensus 156 ~ 156 (156)
+
T Consensus 94 ~ 94 (130)
T 1wmj_A 94 L 94 (130)
T ss_dssp C
T ss_pred E
Confidence 3
No 69
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.64 E-value=8.2e-16 Score=102.39 Aligned_cols=71 Identities=23% Similarity=0.515 Sum_probs=64.1
Q ss_pred ecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 79 PINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 79 ~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
.++ .++|++.+. .+++++|.||++||++|+.+.|.++++++.+++ +.++.+|++++++++++|++.++|+.
T Consensus 3 ~l~-~~~~~~~~~----~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~v~~~Pt~ 73 (104)
T 2e0q_A 3 HLD-SKNFDSFLA----SHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ-VGFGKLNSDENPDIAARYGVMSLPTV 73 (104)
T ss_dssp ECC-TTTHHHHHH----HSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSSCEE
T ss_pred ecC-HHHHHHHHh----cCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC-ceEEEEECCCCHHHHHhCCccccCEE
Confidence 344 568988884 589999999999999999999999999999986 99999999999999999999999874
No 70
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.63 E-value=8.1e-16 Score=119.08 Aligned_cols=76 Identities=20% Similarity=0.326 Sum_probs=66.8
Q ss_pred ceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcC---CeEEEEEEC--CCCHHHHHHhCCc
Q 031608 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDT---KLKFYYVDV--NKVSKDLVKRGNI 150 (156)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~---~v~~~~vd~--d~~~~l~~~~~i~ 150 (156)
.+..++ .++|++.+. ..+++++|+|||+||++|+.+.|.|+++++++++ ++.|+.||+ +++++++++|+|.
T Consensus 13 ~v~~l~-~~~f~~~i~---~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~v~ 88 (244)
T 3q6o_A 13 PLTLLQ-ADTVRGAVL---GSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIP 88 (244)
T ss_dssp SSEEEC-TTTHHHHHS---SCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTTCC
T ss_pred CceeCC-hhhHHHHHh---hCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcCCC
Confidence 466666 458888774 4679999999999999999999999999999986 799999999 6799999999999
Q ss_pred cceec
Q 031608 151 SVSIQ 155 (156)
Q Consensus 151 sv~~~ 155 (156)
++|+.
T Consensus 89 ~~Pt~ 93 (244)
T 3q6o_A 89 GFPTV 93 (244)
T ss_dssp SSSEE
T ss_pred ccCEE
Confidence 99874
No 71
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.63 E-value=2.3e-16 Score=108.05 Aligned_cols=72 Identities=15% Similarity=0.201 Sum_probs=62.9
Q ss_pred EecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 78 EPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 78 ~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
..+.+.++| +.+ ..+++++|+|||+||++|+.+.|.++++++.++ ++.|+.+|++++++++++|+|.++|+.
T Consensus 5 ~~~~~~~~f-~~~----~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~ 76 (110)
T 2l6c_A 5 RDITTEAGM-AHF----EGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP-QVAISSVDSEARPELMKELGFERVPTL 76 (110)
T ss_dssp SBCGGGCSH-HHH----TTCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT-TSCEEEEEGGGCHHHHHHTTCCSSCEE
T ss_pred eecCCHHHH-HHH----HcCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC-CcEEEEEcCcCCHHHHHHcCCcccCEE
Confidence 344556678 555 368999999999999999999999999999887 599999999999999999999999874
No 72
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.63 E-value=1.1e-15 Score=122.61 Aligned_cols=77 Identities=17% Similarity=0.312 Sum_probs=68.1
Q ss_pred cceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECC--CCHHHHHHhCCccc
Q 031608 75 VELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVN--KVSKDLVKRGNISV 152 (156)
Q Consensus 75 ~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d--~~~~l~~~~~i~sv 152 (156)
..+++++ .++|++++. ..++++||+|||+||++|+.+.|.|+++++++++.+.++.||+| ++++++++|+|.++
T Consensus 17 ~~vv~lt-~~~f~~~i~---~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~d~~~~~~l~~~~~I~~~ 92 (298)
T 3ed3_A 17 PHISELT-PKSFDKAIH---NTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKNKALCAKYDVNGF 92 (298)
T ss_dssp TTCEECC-HHHHHHHHT---SSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTSTTTHHHHHHTTCCBS
T ss_pred CCeEEeC-HHHHHHHHH---hCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCCcEEEEEEccCccCHHHHHhCCCCcc
Confidence 3466665 679999984 46899999999999999999999999999999877999999998 68999999999999
Q ss_pred eec
Q 031608 153 SIQ 155 (156)
Q Consensus 153 ~~~ 155 (156)
|+.
T Consensus 93 Pt~ 95 (298)
T 3ed3_A 93 PTL 95 (298)
T ss_dssp SEE
T ss_pred ceE
Confidence 864
No 73
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.63 E-value=7.9e-16 Score=117.65 Aligned_cols=75 Identities=19% Similarity=0.367 Sum_probs=67.1
Q ss_pred ceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCC---eEEEEEECCCCHHHHHHhCCccc
Q 031608 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTK---LKFYYVDVNKVSKDLVKRGNISV 152 (156)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~---v~~~~vd~d~~~~l~~~~~i~sv 152 (156)
.+..++ .++|++++ ..+++++|+|||+||++|+.+.|.|+++++++++. +.++.||++++++++++|+|.++
T Consensus 16 ~v~~l~-~~~~~~~~----~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~ 90 (241)
T 3idv_A 16 GVLVLN-DANFDNFV----ADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSASVLASRFDVSGY 90 (241)
T ss_dssp TEEEEC-TTTHHHHH----TTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSS
T ss_pred CcEEec-ccCHHHHH----hcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCCHHHHHhcCCCcC
Confidence 456665 56899988 56999999999999999999999999999998754 99999999999999999999999
Q ss_pred eec
Q 031608 153 SIQ 155 (156)
Q Consensus 153 ~~~ 155 (156)
|+.
T Consensus 91 Pt~ 93 (241)
T 3idv_A 91 PTI 93 (241)
T ss_dssp SEE
T ss_pred CEE
Confidence 874
No 74
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.62 E-value=1.7e-15 Score=115.00 Aligned_cols=75 Identities=17% Similarity=0.236 Sum_probs=67.5
Q ss_pred ceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
.+..++ .++|+..+. .++++||+|||+||++|+.+.|.|+++++++++++.|+.||++++++++++|+|.++|+.
T Consensus 98 ~v~~l~-~~~f~~~~~----~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~ 172 (210)
T 3apq_A 98 EIITLE-RREFDAAVN----SGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGLLRIGAVNCGDDRMLCRMKGVNSYPSL 172 (210)
T ss_dssp TSEECC-HHHHHHHHH----HSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred ceEEec-HHHHHHHHc----cCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcCceEEEEEECCccHHHHHHcCCCcCCeE
Confidence 455554 668998884 589999999999999999999999999999987899999999999999999999999875
No 75
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.62 E-value=1.1e-15 Score=108.24 Aligned_cols=77 Identities=17% Similarity=0.345 Sum_probs=67.0
Q ss_pred ceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHH---HHHHHHhcCCeEEEEEEC----CCCHHHHHHhC
Q 031608 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKL---EKLAAEFDTKLKFYYVDV----NKVSKDLVKRG 148 (156)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l---~~la~~~~~~v~~~~vd~----d~~~~l~~~~~ 148 (156)
.+..+.+.++++..+.. ..++++||+|||+||++|+.+.|.+ .++++.+++ +.++.||+ +++.+++++|+
T Consensus 12 ~f~~~~~~~~~~~~l~~--~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~~-~~~~~vd~~~~~~~~~~l~~~~~ 88 (134)
T 2fwh_A 12 NFTQIKTVDELNQALVE--AKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALAD-TVLLQANVTANDAQDVALLKHLN 88 (134)
T ss_dssp CCEECCSHHHHHHHHHH--HTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTTT-SEEEEEECTTCCHHHHHHHHHTT
T ss_pred CcEEecCHHHHHHHHHH--hcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC-cEEEEEeCCCCcchHHHHHHHcC
Confidence 45667888899988865 3489999999999999999999999 999998875 99999999 45778999999
Q ss_pred Cccceec
Q 031608 149 NISVSIQ 155 (156)
Q Consensus 149 i~sv~~~ 155 (156)
|.++|+.
T Consensus 89 v~~~Pt~ 95 (134)
T 2fwh_A 89 VLGLPTI 95 (134)
T ss_dssp CCSSSEE
T ss_pred CCCCCEE
Confidence 9999864
No 76
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.61 E-value=7.4e-16 Score=109.72 Aligned_cols=75 Identities=21% Similarity=0.206 Sum_probs=63.5
Q ss_pred cceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCcccee
Q 031608 75 VELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSI 154 (156)
Q Consensus 75 ~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~ 154 (156)
..+..| +.++|++.+..+ ..++++||+|||+||++|+.+.|.|++++++++ ++.|+.||+++++ ++|+|.++|+
T Consensus 10 g~v~~i-~~~~~~~~v~~~-~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~-~v~~~~vd~~~~~---~~~~i~~~Pt 83 (135)
T 2dbc_A 10 GELREI-SGNQYVNEVTNA-EKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP-ETKFVKAIVNSCI---EHYHDNCLPT 83 (135)
T ss_dssp CSCEEC-CHHHHHHHTTTC-CSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS-SEEEEEECCSSSC---SSCCSSCCSE
T ss_pred CceEEc-CHHHHHHHHHhc-CCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC-CcEEEEEEhhcCc---ccCCCCCCCE
Confidence 456778 678999888531 234799999999999999999999999999987 5999999999876 6899999987
Q ss_pred c
Q 031608 155 Q 155 (156)
Q Consensus 155 ~ 155 (156)
.
T Consensus 84 ~ 84 (135)
T 2dbc_A 84 I 84 (135)
T ss_dssp E
T ss_pred E
Confidence 5
No 77
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.61 E-value=1e-16 Score=112.45 Aligned_cols=76 Identities=17% Similarity=0.360 Sum_probs=64.9
Q ss_pred ceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhc--CCeEEEEEECCCCHHHHHHhCCccce
Q 031608 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFD--TKLKFYYVDVNKVSKDLVKRGNISVS 153 (156)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~--~~v~~~~vd~d~~~~l~~~~~i~sv~ 153 (156)
.+..++ .++|++.+. ..+++++|+|||+||++|+.+.|.|+++++++. +++.|+.||+++++.++++|+|.++|
T Consensus 8 ~v~~l~-~~~~~~~~~---~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~P 83 (133)
T 2dj3_A 8 PVKVVV-GKTFDAIVM---DPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDITNDQYKVEGFP 83 (133)
T ss_dssp SSEECC-TTTCCCCCT---CTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSCCCCSSCCCSSSS
T ss_pred ceEEEc-CCCHHHHhc---cCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCHHHHhhcCCCcCC
Confidence 455565 456776663 358999999999999999999999999999997 46999999999999999999999998
Q ss_pred ec
Q 031608 154 IQ 155 (156)
Q Consensus 154 ~~ 155 (156)
+.
T Consensus 84 t~ 85 (133)
T 2dj3_A 84 TI 85 (133)
T ss_dssp EE
T ss_pred EE
Confidence 74
No 78
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.61 E-value=6.4e-16 Score=109.72 Aligned_cols=71 Identities=17% Similarity=0.213 Sum_probs=62.9
Q ss_pred ceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEEC---------CCCHHHHHH
Q 031608 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDV---------NKVSKDLVK 146 (156)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~---------d~~~~l~~~ 146 (156)
.+..+ +.++|++.+. + +++|+|||+||++|+.+.|.+++++++++ +.|+.||+ +++++++++
T Consensus 17 ~v~~l-~~~~~~~~~~-----~-~vlv~F~a~wC~~C~~~~p~l~~l~~~~~--v~~~~vd~~~~~~~~~~d~~~~l~~~ 87 (135)
T 3emx_A 17 RLIYI-TPEEFRQLLQ-----G-DAILAVYSKTCPHCHRDWPQLIQASKEVD--VPIVMFIWGSLIGERELSAARLEMNK 87 (135)
T ss_dssp EEEEC-CHHHHHHHHT-----S-SEEEEEEETTCHHHHHHHHHHHHHHTTCC--SCEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred ceeec-CHHHHHHHhC-----C-cEEEEEECCcCHhhhHhChhHHHHHHHCC--CEEEEEECCCchhhhhhhhhHHHHHH
Confidence 35566 5679999883 3 99999999999999999999999999886 89999999 888999999
Q ss_pred hCCccceec
Q 031608 147 RGNISVSIQ 155 (156)
Q Consensus 147 ~~i~sv~~~ 155 (156)
|+|.++|+.
T Consensus 88 ~~v~~~Pt~ 96 (135)
T 3emx_A 88 AGVEGTPTL 96 (135)
T ss_dssp HTCCSSSEE
T ss_pred cCCceeCeE
Confidence 999999975
No 79
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.60 E-value=6.6e-16 Score=113.34 Aligned_cols=75 Identities=16% Similarity=0.246 Sum_probs=60.6
Q ss_pred CChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHH---HHHHHHhcCCeEEEEEECCCCHHH--------------
Q 031608 81 NDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKL---EKLAAEFDTKLKFYYVDVNKVSKD-------------- 143 (156)
Q Consensus 81 ~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l---~~la~~~~~~v~~~~vd~d~~~~l-------------- 143 (156)
.+..+|++.+..+...||++||+|||+||++|+.+.+.+ .++.+.+.+++.++.||+++..++
T Consensus 31 ~~~~~~~~~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~ 110 (172)
T 3f9u_A 31 AKFDDYDLGMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINNDYVLITLYVDNKTPLTEPVKIMENGTERT 110 (172)
T ss_dssp CCBSCHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEETTCCCEEEEEEEEEETTEEEE
T ss_pred cchhhHHHHHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCCEEEEEEecCcccccchhhhhhhcchhhh
Confidence 456688888887778899999999999999999985444 555555544699999999987755
Q ss_pred ------------HHHhCCccceec
Q 031608 144 ------------LVKRGNISVSIQ 155 (156)
Q Consensus 144 ------------~~~~~i~sv~~~ 155 (156)
+.+|+|.++|+.
T Consensus 111 ~~~~~~~~~~~~~~~~~v~~~Pt~ 134 (172)
T 3f9u_A 111 LRTVGDKWSYLQRVKFGANAQPFY 134 (172)
T ss_dssp EEEHHHHHHHHHHHHHSCCCSSEE
T ss_pred hhhhhhhhhHHHHHHcCCCCcceE
Confidence 789999999874
No 80
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.60 E-value=6.5e-16 Score=105.57 Aligned_cols=75 Identities=19% Similarity=0.383 Sum_probs=65.7
Q ss_pred ceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhc---CCeEEEEEECCCCHHHHHHhCCccc
Q 031608 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFD---TKLKFYYVDVNKVSKDLVKRGNISV 152 (156)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~---~~v~~~~vd~d~~~~l~~~~~i~sv 152 (156)
.+..++ .++|++++. .+++++|.|||+||++|+.+.|.++++++.+. .++.++.+|++++++++++|+|.++
T Consensus 8 ~v~~l~-~~~~~~~~~----~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~ 82 (120)
T 1mek_A 8 HVLVLR-KSNFAEALA----AHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGY 82 (120)
T ss_dssp TEEECC-TTTHHHHHH----HCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCCSSHHHHTCCSS
T ss_pred CcEEec-hhhHHHHHc----cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCHHHHHHCCCCcc
Confidence 355554 568998884 58999999999999999999999999999886 3599999999999999999999999
Q ss_pred eec
Q 031608 153 SIQ 155 (156)
Q Consensus 153 ~~~ 155 (156)
|+.
T Consensus 83 Pt~ 85 (120)
T 1mek_A 83 PTI 85 (120)
T ss_dssp SEE
T ss_pred cEE
Confidence 864
No 81
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.60 E-value=6e-16 Score=114.90 Aligned_cols=60 Identities=15% Similarity=0.215 Sum_probs=55.1
Q ss_pred cCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhC---Cccceec
Q 031608 95 ELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRG---NISVSIQ 155 (156)
Q Consensus 95 ~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~---i~sv~~~ 155 (156)
..+++++|+|||+|||||+.+.|.++++++.++ ++.|+.||+|++++++.+|+ +.++|+.
T Consensus 52 ~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~-~v~~~~v~~d~~~~~~~~~~~~~v~~iPt~ 114 (167)
T 1z6n_A 52 IERRYRLLVAGEMWCPDCQINLAALDFAQRLQP-NIELAIISKGRAEDDLRQRLALERIAIPLV 114 (167)
T ss_dssp CCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT-TEEEEEECHHHHHHHTTTTTTCSSCCSSEE
T ss_pred hCCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-CcEEEEEECCCCHHHHHHHHHcCCCCcCeE
Confidence 358999999999999999999999999999886 59999999999999999997 9999874
No 82
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.59 E-value=2.2e-15 Score=124.02 Aligned_cols=75 Identities=21% Similarity=0.402 Sum_probs=64.3
Q ss_pred ceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHh------cCCeEEEEEECCCCHHHHHHhCC
Q 031608 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEF------DTKLKFYYVDVNKVSKDLVKRGN 149 (156)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~------~~~v~~~~vd~d~~~~l~~~~~i 149 (156)
.+..++ .++|++++. .+++++|+|||+||++|+.+.|.|+++++.+ .+++.|++||++++++++++|+|
T Consensus 6 ~v~~l~-~~~f~~~~~----~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~~l~~~~~v 80 (382)
T 2r2j_A 6 EITSLD-TENIDEILN----NADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQRYRI 80 (382)
T ss_dssp --CBCC-TTTHHHHHH----HCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCHHHHHHTTC
T ss_pred ceEECC-HHHHHHHHh----cCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccHHHHHhcCC
Confidence 345554 568999884 5899999999999999999999999999988 33599999999999999999999
Q ss_pred ccceec
Q 031608 150 ISVSIQ 155 (156)
Q Consensus 150 ~sv~~~ 155 (156)
.++|+-
T Consensus 81 ~~~Pt~ 86 (382)
T 2r2j_A 81 SKYPTL 86 (382)
T ss_dssp CEESEE
T ss_pred CcCCEE
Confidence 999863
No 83
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.59 E-value=8.4e-16 Score=106.10 Aligned_cols=72 Identities=14% Similarity=0.094 Sum_probs=57.6
Q ss_pred eEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCC------CHHHHHHhCCc
Q 031608 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNK------VSKDLVKRGNI 150 (156)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~------~~~l~~~~~i~ 150 (156)
+..+ +.++|++.+. ++++++|+|||+||++|+.+.|.+++++++++..+. .+|++. .++++++|+|.
T Consensus 14 ~~~~-~~~~~~~~~~----~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~~v~--~~~~~~~~~~~~~~~~~~~~~i~ 86 (118)
T 1zma_A 14 LEVT-TVVRAQEALD----KKETATFFIGRKTCPYCRKFAGTLSGVVAETKAHIY--FINSEEPSQLNDLQAFRSRYGIP 86 (118)
T ss_dssp SEEC-CHHHHHHHHH----TTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCCCCE--EEETTCGGGHHHHHHHHHHHTCC
T ss_pred hhcC-CHHHHHHHHh----CCCeEEEEEECCCCccHHHHHHHHHHHHHhcCCeEE--EEECCCcCcHHHHHHHHHHcCCC
Confidence 3444 5678888884 689999999999999999999999999998874444 455543 35788999999
Q ss_pred cceec
Q 031608 151 SVSIQ 155 (156)
Q Consensus 151 sv~~~ 155 (156)
++|+.
T Consensus 87 ~~Pt~ 91 (118)
T 1zma_A 87 TVPGF 91 (118)
T ss_dssp SSCEE
T ss_pred CCCeE
Confidence 99874
No 84
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.59 E-value=1.9e-15 Score=105.29 Aligned_cols=61 Identities=20% Similarity=0.297 Sum_probs=57.0
Q ss_pred cCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEE--CCCCHHHHHHhCCccceec
Q 031608 95 ELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVD--VNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 95 ~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd--~d~~~~l~~~~~i~sv~~~ 155 (156)
..+++++|+|||+||++|+.+.|.++++++++.+++.|+.|| ++++++++++|+|.++|+.
T Consensus 24 ~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~d~~~~~~~~~~v~~~Pt~ 86 (126)
T 2l57_A 24 KEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREGKFNIYYARLEEEKNIDLAYKYDANIVPTT 86 (126)
T ss_dssp CSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSSSCEEEEEETTSSHHHHHHHHTTCCSSSEE
T ss_pred hCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcCCeEEEEEeCCCCchHHHHHHcCCcceeEE
Confidence 468999999999999999999999999999997679999999 9999999999999999874
No 85
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.58 E-value=3.9e-15 Score=105.72 Aligned_cols=75 Identities=25% Similarity=0.395 Sum_probs=55.4
Q ss_pred ceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
.+..++ .++|++.+. ..++ ++|+||++||++|+.+.|.|+++++++++++.|+.||++++++++++|+|.++|+.
T Consensus 34 ~v~~l~-~~~~~~~~~---~~~~-vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~ 108 (140)
T 1v98_A 34 WVVEAD-EKGFAQEVA---GAPL-TLVDFFAPWCGPCRLVSPILEELARDHAGRLKVVKVNVDEHPGLAARYGVRSVPTL 108 (140)
T ss_dssp -------------------CCCE-EEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred ccccCC-HHHHHHHHH---cCCC-EEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCCCHHHHHHCCCCccCEE
Confidence 345554 557888774 3445 99999999999999999999999999987799999999999999999999999874
No 86
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.57 E-value=1e-14 Score=123.58 Aligned_cols=76 Identities=13% Similarity=0.334 Sum_probs=68.1
Q ss_pred cceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcC-CeEEEEEECCCCHHHHHHhCCccce
Q 031608 75 VELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVNKVSKDLVKRGNISVS 153 (156)
Q Consensus 75 ~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~-~v~~~~vd~d~~~~l~~~~~i~sv~ 153 (156)
..+..++ .++|++++ ..+++++|+|||+||++|+.+.|.|+++++.+.+ ++.|++||++++++++++|+|.++|
T Consensus 14 ~~v~~l~-~~~f~~~~----~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P 88 (504)
T 2b5e_A 14 SAVVKLA-TDSFNEYI----QSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTENQDLCMEHNIPGFP 88 (504)
T ss_dssp SSCEECC-TTTHHHHH----TTCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTTCHHHHHHTTCCSSS
T ss_pred CCcEECC-HHHHHHHH----hcCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCCCHHHHHhcCCCcCC
Confidence 3466665 56899998 5689999999999999999999999999999987 4999999999999999999999998
Q ss_pred ec
Q 031608 154 IQ 155 (156)
Q Consensus 154 ~~ 155 (156)
+-
T Consensus 89 t~ 90 (504)
T 2b5e_A 89 SL 90 (504)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 87
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.56 E-value=9.1e-16 Score=107.60 Aligned_cols=75 Identities=24% Similarity=0.498 Sum_probs=59.9
Q ss_pred eEecCChhhHHHHHHHhhcCCCcEEEEEeCCCCh--------------hHHhhhHHHHHHHHHhcCCeEEEEEECCCCHH
Q 031608 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCR--------------KCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSK 142 (156)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~--------------~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~ 142 (156)
+..++ .++|++.+. .++++++|+|||+||+ +|+.+.|.++++++++++++.+++||++++++
T Consensus 5 v~~l~-~~~f~~~~~---~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~~~~~~vd~d~~~~ 80 (123)
T 1oaz_A 5 IIHLT-DDSFDTDVL---KADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPG 80 (123)
T ss_dssp CEECC-STTHHHHTT---SCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC-------CEEEEEETTSCTT
T ss_pred cEecC-hhhHHHHHH---hCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCCeEEEEEECCCCHH
Confidence 45554 557876653 5799999999999999 99999999999999998779999999999999
Q ss_pred HHHHhCCccceec
Q 031608 143 DLVKRGNISVSIQ 155 (156)
Q Consensus 143 l~~~~~i~sv~~~ 155 (156)
++++|+|.++|+.
T Consensus 81 l~~~~~v~~~Pt~ 93 (123)
T 1oaz_A 81 TAPKYGIRGIPTL 93 (123)
T ss_dssp TGGGGTCCBSSEE
T ss_pred HHHHcCCCccCEE
Confidence 9999999999874
No 88
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.56 E-value=1.7e-15 Score=104.35 Aligned_cols=73 Identities=22% Similarity=0.409 Sum_probs=59.9
Q ss_pred ceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcC-----CeEEEEEECCCCHHHHHHhCCc
Q 031608 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDT-----KLKFYYVDVNKVSKDLVKRGNI 150 (156)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~-----~v~~~~vd~d~~~~l~~~~~i~ 150 (156)
.+..++ .++|++.+. ..+++++|+|||+||++|+.+.|.|+++++++++ ++.|+.||+++++ +++ +|.
T Consensus 8 ~v~~l~-~~~f~~~v~---~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~-~~~--~v~ 80 (121)
T 2djj_A 8 PVTVVV-AKNYNEIVL---DDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAND-VPD--EIQ 80 (121)
T ss_dssp SSEECC-TTTTTTSSS---CTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSC-CSS--CCS
T ss_pred CeEEec-ccCHHHHhh---cCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcccc-ccc--ccC
Confidence 355565 457777653 4689999999999999999999999999999976 7999999999876 444 888
Q ss_pred cceec
Q 031608 151 SVSIQ 155 (156)
Q Consensus 151 sv~~~ 155 (156)
++|+.
T Consensus 81 ~~Pt~ 85 (121)
T 2djj_A 81 GFPTI 85 (121)
T ss_dssp SSSEE
T ss_pred cCCeE
Confidence 88764
No 89
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.55 E-value=1.3e-14 Score=110.86 Aligned_cols=119 Identities=8% Similarity=0.043 Sum_probs=80.2
Q ss_pred ccCCccCCCCCccccccCCce-EEEeCCCccccccccchhccccCCCCCCCccceEecCChhhHHHHHHHhhcCCCcE-E
Q 031608 24 FQQPWSSGSSSCLLLQKNSAF-FWVDTASRSKSARRDVRVEALWPDLSRPTSVELEPINDSDHLDQILLRAQELSQPI-L 101 (156)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~p~~~~~~~i~~~~~~~~~l~~a~~~~k~v-l 101 (156)
....|.+.|+|++.+-+.+.. .-|.|..........+...... . .....+ +.++|+.++ ..++++ +
T Consensus 73 l~~~~~v~~~Ptl~~~~~~~~~~~~~G~~~~~~l~~~~~~~~~~---~----~~~~~l-~~~~~~~~~----~~~~~~~~ 140 (229)
T 2ywm_A 73 ETEKYGVDRVPTIVIEGDKDYGIRYIGLPAGLEFTTLINGIFHV---S----QRKPQL-SEKTLELLQ----VVDIPIEI 140 (229)
T ss_dssp HHHHTTCCBSSEEEEESSSCCCEEEESCCCTTHHHHHHHHHHHH---H----TTCCSC-CHHHHHHHT----TCCSCEEE
T ss_pred HHHHcCCCcCcEEEEECCCcccceecCCccHHHHHHHHHHHHhc---c----CCccCC-CHHHHHHHH----hcCCCeEE
Confidence 344577888899887654322 3344432222111111110000 0 011223 456788776 345555 8
Q ss_pred EEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 102 IDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 102 V~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
|+|||+||++|+.+.|.+++++++++ ++.++.||++++++++++|+|.++|+.
T Consensus 141 v~F~a~wC~~C~~~~~~~~~~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~ 193 (229)
T 2ywm_A 141 WVFVTTSCGYCPSAAVMAWDFALAND-YITSKVIDASENQDLAEQFQVVGVPKI 193 (229)
T ss_dssp EEEECTTCTTHHHHHHHHHHHHHHCT-TEEEEEEEGGGCHHHHHHTTCCSSSEE
T ss_pred EEEECCCCcchHHHHHHHHHHHHHCC-CeEEEEEECCCCHHHHHHcCCcccCEE
Confidence 89999999999999999999999985 699999999999999999999999874
No 90
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.55 E-value=2.3e-15 Score=97.47 Aligned_cols=58 Identities=17% Similarity=0.310 Sum_probs=54.6
Q ss_pred CcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 98 QPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 98 k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
.+++|.||++||++|+.+.|.++++++++++++.++.+|++++++++++||+.++|+.
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 60 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPDAVEVEYINVMENPQKAMEYGIMAVPTI 60 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSSSEEEEEEESSSSCCTTTSTTTCCSSEE
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCCceEEEEEECCCCHHHHHHCCCcccCEE
Confidence 5789999999999999999999999999987799999999999999999999999874
No 91
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.55 E-value=4.5e-15 Score=116.52 Aligned_cols=78 Identities=13% Similarity=0.143 Sum_probs=67.8
Q ss_pred cceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCcccee
Q 031608 75 VELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSI 154 (156)
Q Consensus 75 ~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~ 154 (156)
..+..|.+.++|.+++..+ ..+++|||+|||+||++|+.+.|.|.+++++|++ +.|++||+++ ++++.+|+|.++|+
T Consensus 112 G~V~ei~s~~~f~~~v~~~-~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~-v~f~kVd~d~-~~l~~~~~I~~~PT 188 (245)
T 1a0r_P 112 GFVYELESGEQFLETIEKE-QKITTIVVHIYEDGIKGCDALNSSLICLAAEYPM-VKFCKIKASN-TGAGDRFSSDVLPT 188 (245)
T ss_dssp CSEEECCSHHHHHHHHHSS-CTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCTT-SEEEEEEHHH-HCCTTSSCTTTCSE
T ss_pred CeEEEeCCHHHHHHHHHHh-cCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCC-CEEEEEeCCc-HHHHHHCCCCCCCE
Confidence 4577887788999998521 2489999999999999999999999999999985 9999999987 77889999999997
Q ss_pred c
Q 031608 155 Q 155 (156)
Q Consensus 155 ~ 155 (156)
.
T Consensus 189 l 189 (245)
T 1a0r_P 189 L 189 (245)
T ss_dssp E
T ss_pred E
Confidence 5
No 92
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.55 E-value=2.3e-15 Score=97.50 Aligned_cols=57 Identities=14% Similarity=0.216 Sum_probs=53.6
Q ss_pred cEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 99 PILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 99 ~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
..+|.|||+||++|+.+.|.++++++++++++.++.+|++++++++++||+.++|+.
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 59 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMVDREKAIEYGLMAVPAI 59 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCSSCCEEEECTTTCGGGGGGTCSSCSSEE
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHhCCceeeCEE
Confidence 468999999999999999999999999987799999999999999999999999874
No 93
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.54 E-value=4e-15 Score=111.22 Aligned_cols=70 Identities=14% Similarity=0.200 Sum_probs=57.6
Q ss_pred hhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHH-H--HHHHHHhcCCeEEEEEECCCCHHHHHHh--------CCcc
Q 031608 83 SDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPK-L--EKLAAEFDTKLKFYYVDVNKVSKDLVKR--------GNIS 151 (156)
Q Consensus 83 ~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~-l--~~la~~~~~~v~~~~vd~d~~~~l~~~~--------~i~s 151 (156)
.+.|+... ..+|+|||+|||+||++|+.+.|. | .++++.+.+++.+++||.++.++++..| |+.+
T Consensus 29 ~ea~~~A~----~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~fv~ikVD~de~~~l~~~y~~~~q~~~gv~g 104 (173)
T 3ira_A 29 EEAFEKAR----KENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEAFVSIKVDREERPDIDNIYMTVCQIILGRGG 104 (173)
T ss_dssp HHHHHHHH----HHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHHCEEEEEETTTCHHHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHH----HhCCCEEEecccchhHhhccccccccCCHHHHHHHHhcCceeeeCCcccCcHHHHHHHHHHHHcCCCC
Confidence 34555554 569999999999999999999993 3 5677766656999999999999999988 9999
Q ss_pred ceecC
Q 031608 152 VSIQI 156 (156)
Q Consensus 152 v~~~~ 156 (156)
+|+.+
T Consensus 105 ~Pt~v 109 (173)
T 3ira_A 105 WPLNI 109 (173)
T ss_dssp SSEEE
T ss_pred Cccee
Confidence 98753
No 94
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.53 E-value=2.2e-14 Score=120.67 Aligned_cols=74 Identities=18% Similarity=0.316 Sum_probs=66.1
Q ss_pred eEecCChhhHHHHHHHhhcCC---CcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccce
Q 031608 77 LEPINDSDHLDQILLRAQELS---QPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVS 153 (156)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~---k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~ 153 (156)
+..++ .++|++++. .+ ++++|+|||+||++|+.+.|.|+++++.+++.+.|+.||++++++++++|||.++|
T Consensus 3 v~~l~-~~~f~~~i~----~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P 77 (481)
T 3f8u_A 3 VLELT-DDNFESRIS----DTGSAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSGYP 77 (481)
T ss_dssp CEEEC-TTTHHHHTT----CCSSSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCCEEEEETTTCHHHHHHTTCCEES
T ss_pred eEEec-HHHHHHHHH----hCCCCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcCceEEEEEECCCCHHHHHhcCCCCCC
Confidence 45554 568999983 45 99999999999999999999999999999877999999999999999999999998
Q ss_pred ec
Q 031608 154 IQ 155 (156)
Q Consensus 154 ~~ 155 (156)
+-
T Consensus 78 tl 79 (481)
T 3f8u_A 78 TL 79 (481)
T ss_dssp EE
T ss_pred EE
Confidence 63
No 95
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.53 E-value=5.8e-15 Score=103.04 Aligned_cols=73 Identities=18% Similarity=0.272 Sum_probs=61.3
Q ss_pred hhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHH---HHHHHHhcCCeEEEEEECC--CCHHHHHHhCCccceec
Q 031608 83 SDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKL---EKLAAEFDTKLKFYYVDVN--KVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 83 ~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l---~~la~~~~~~v~~~~vd~d--~~~~l~~~~~i~sv~~~ 155 (156)
..+|++.+..+...++++||+|||+||++|+.+.|.+ +++.+.+..++.++.||++ .+.+++++|+|.++|+.
T Consensus 13 ~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~ 90 (130)
T 2kuc_A 13 ELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRHFVNLKMDMEKGEGVELRKKYGVHAYPTL 90 (130)
T ss_dssp CCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHHSEEEEECSSSTTHHHHHHHTTCCSSCEE
T ss_pred cCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcCeEEEEEecCCcchHHHHHHcCCCCCCEE
Confidence 3467777765445689999999999999999999999 7777766556899999998 57899999999999874
No 96
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.53 E-value=3.2e-15 Score=108.04 Aligned_cols=73 Identities=10% Similarity=0.018 Sum_probs=53.8
Q ss_pred eEecCChhhHHHHHHHhhcCCCcEEEEEeCCC--ChhHHhhhHHHHHHHHHhcCCeE--EEEEECCCCHHHHHHhCCccc
Q 031608 77 LEPINDSDHLDQILLRAQELSQPILIDWMASW--CRKCIYLKPKLEKLAAEFDTKLK--FYYVDVNKVSKDLVKRGNISV 152 (156)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~W--C~~Ck~~~p~l~~la~~~~~~v~--~~~vd~d~~~~l~~~~~i~sv 152 (156)
+..+++ ++|++++. .++.++|.||++| |++|+.+.|.|++++++| +++. |++||+|++++++.+|+|.++
T Consensus 19 ~~~l~~-~~f~~~i~----~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~~v~~~~~~Vd~d~~~~la~~~~V~~i 92 (142)
T 2es7_A 19 WQPVEA-STVDDWIK----RVGDGVILLSSDPRRTPEVSDNPVMIAELLREF-PQFDWQVAVADLEQSEAIGDRFNVRRF 92 (142)
T ss_dssp CEECCC-C------------CCSEEEEECCCSCC----CCHHHHHHHHHHTC-TTSCCEEEEECHHHHHHHHHTTTCCSS
T ss_pred Cccccc-ccHHHHHH----hCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-cccceeEEEEECCCCHHHHHhcCCCcC
Confidence 455654 68999984 4667899999988 999999999999999999 6788 999999999999999999999
Q ss_pred eec
Q 031608 153 SIQ 155 (156)
Q Consensus 153 ~~~ 155 (156)
|+.
T Consensus 93 PT~ 95 (142)
T 2es7_A 93 PAT 95 (142)
T ss_dssp SEE
T ss_pred CeE
Confidence 975
No 97
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.52 E-value=8.9e-15 Score=124.19 Aligned_cols=77 Identities=12% Similarity=0.081 Sum_probs=66.3
Q ss_pred ceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcC--------CeEEEEEECCCCHHHHHHh
Q 031608 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDT--------KLKFYYVDVNKVSKDLVKR 147 (156)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~--------~v~~~~vd~d~~~~l~~~~ 147 (156)
.+..++ .++|++++.. ..++++||+|||+||++|+.+.|.|+++++++.+ .+.|++||++++++++++|
T Consensus 24 ~V~~Lt-~~~F~~~l~~--~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~la~~y 100 (470)
T 3qcp_A 24 SVVDLS-GDDFSRVHRV--APLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVDLCRKY 100 (470)
T ss_dssp TEEECS-CSCGGGTCTT--GGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCHHHHHHT
T ss_pred CcEECC-HHHHHHHHHh--CCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCHHHHHHc
Confidence 456665 4588888742 3458999999999999999999999999999862 4999999999999999999
Q ss_pred CCccceec
Q 031608 148 GNISVSIQ 155 (156)
Q Consensus 148 ~i~sv~~~ 155 (156)
+|.++|+.
T Consensus 101 ~V~~~PTl 108 (470)
T 3qcp_A 101 DINFVPRL 108 (470)
T ss_dssp TCCSSCEE
T ss_pred CCCccCeE
Confidence 99999975
No 98
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.52 E-value=2.7e-14 Score=122.64 Aligned_cols=76 Identities=20% Similarity=0.330 Sum_probs=66.3
Q ss_pred ceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcC---CeEEEEEECC--CCHHHHHHhCCc
Q 031608 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDT---KLKFYYVDVN--KVSKDLVKRGNI 150 (156)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~---~v~~~~vd~d--~~~~l~~~~~i~ 150 (156)
.+..++ .++|++.+. ..+++++|+|||+||++|+.+.|.|+++++++.+ ++.|+.||++ ++++++++|+|.
T Consensus 13 ~V~~Lt-~~~f~~~v~---~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V~ 88 (519)
T 3t58_A 13 PLTLLD-ADSVRPTVL---GSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNIA 88 (519)
T ss_dssp SSEEEC-TTTHHHHHS---SCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTCC
T ss_pred CcEECC-hHHHHHHHH---hCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCCc
Confidence 466665 558888774 4679999999999999999999999999999976 6999999995 489999999999
Q ss_pred cceec
Q 031608 151 SVSIQ 155 (156)
Q Consensus 151 sv~~~ 155 (156)
++|+.
T Consensus 89 ~~PTl 93 (519)
T 3t58_A 89 GFPTV 93 (519)
T ss_dssp SBSEE
T ss_pred ccCEE
Confidence 99874
No 99
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.52 E-value=2.6e-14 Score=108.62 Aligned_cols=70 Identities=14% Similarity=0.123 Sum_probs=61.1
Q ss_pred ChhhHHHHHHHhhcCCCcE-EEEEeCCCChhHHhhhHHHHHHHHHhc----CCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 82 DSDHLDQILLRAQELSQPI-LIDWMASWCRKCIYLKPKLEKLAAEFD----TKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 82 ~~~~~~~~l~~a~~~~k~v-lV~F~A~WC~~Ck~~~p~l~~la~~~~----~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
+.+.++.+. ..++++ +|+|||+||++|+.+.|.+++++++++ +++.++.||++++++++++|+|.++|+.
T Consensus 122 ~~~~~~~~~----~~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~ 196 (226)
T 1a8l_A 122 MDETKQAIR----NIDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEYPEWADQYNVMAVPKI 196 (226)
T ss_dssp CHHHHHHHT----TCCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGGCHHHHHHTTCCSSCEE
T ss_pred CHHHHHHHH----hcCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEcccCHHHHHhCCCcccCeE
Confidence 455676665 355666 999999999999999999999999987 4799999999999999999999999874
No 100
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.26 E-value=1.3e-15 Score=101.67 Aligned_cols=74 Identities=27% Similarity=0.582 Sum_probs=63.2
Q ss_pred EecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 78 EPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 78 ~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
..++ .+++++.+. ..+++++|.||++||++|+.+.|.++++++++++++.++.+|++++++++++|++.++|+.
T Consensus 4 ~~l~-~~~~~~~~~---~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~ 77 (106)
T 2yj7_A 4 IEVT-DENFEQEVL---KSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVDENPNTAAQYGIRSIPTL 77 (106)
Confidence 3444 345665443 4689999999999999999999999999999986799999999999999999999998864
No 101
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.51 E-value=1.2e-14 Score=111.91 Aligned_cols=78 Identities=15% Similarity=0.172 Sum_probs=67.8
Q ss_pred cceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCcccee
Q 031608 75 VELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSI 154 (156)
Q Consensus 75 ~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~ 154 (156)
..+..|.+.++|.+++... ..+++|||.|||+||++|+.+.|.|+++++.|+ ++.|++||++ +++++.+|+|.++|+
T Consensus 99 g~v~~i~~~~~f~~~v~~~-~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~-~v~f~~vd~~-~~~l~~~~~i~~~PT 175 (217)
T 2trc_P 99 GFVYELETGEQFLETIEKE-QKVTTIVVNIYEDGVRGCDALNSSLECLAAEYP-MVKFCKIRAS-NTGAGDRFSSDVLPT 175 (217)
T ss_dssp CSEEECCSHHHHHHHHHHS-CTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT-TSEEEEEEHH-HHTCSTTSCGGGCSE
T ss_pred CeEEEcCCHHHHHHHHHhc-CCCcEEEEEEECCCCccHHHHHHHHHHHHHHCC-CeEEEEEECC-cHHHHHHCCCCCCCE
Confidence 4567887788999998631 235899999999999999999999999999997 5999999999 888999999999987
Q ss_pred c
Q 031608 155 Q 155 (156)
Q Consensus 155 ~ 155 (156)
.
T Consensus 176 l 176 (217)
T 2trc_P 176 L 176 (217)
T ss_dssp E
T ss_pred E
Confidence 4
No 102
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.51 E-value=4e-14 Score=115.02 Aligned_cols=74 Identities=18% Similarity=0.166 Sum_probs=65.2
Q ss_pred ceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHH-------HHHHHHHhcC-CeEEEEEECCCCHHHHHHh
Q 031608 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPK-------LEKLAAEFDT-KLKFYYVDVNKVSKDLVKR 147 (156)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~-------l~~la~~~~~-~v~~~~vd~d~~~~l~~~~ 147 (156)
.+..++ .++|++++ .++++++|+|||+||+ |+.++|. ++++++.+.+ ++.|++||++++++++++|
T Consensus 12 ~v~~l~-~~~f~~~i----~~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~~~~l~~~~ 85 (350)
T 1sji_A 12 RVVSLT-EKNFKQVL----KKYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKKEAKLAKKL 85 (350)
T ss_dssp CCEEEC-HHHHHHHH----TTCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTTTHHHHHHH
T ss_pred ccEECC-HHHHHHHH----hhCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHhc
Confidence 355664 67899998 4689999999999999 9999999 9999999875 5999999999999999999
Q ss_pred CCccceec
Q 031608 148 GNISVSIQ 155 (156)
Q Consensus 148 ~i~sv~~~ 155 (156)
+|.++|+-
T Consensus 86 ~v~~~Pt~ 93 (350)
T 1sji_A 86 GFDEEGSL 93 (350)
T ss_dssp TCCSTTEE
T ss_pred CCCccceE
Confidence 99999863
No 103
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.50 E-value=1.6e-14 Score=104.73 Aligned_cols=72 Identities=14% Similarity=0.248 Sum_probs=60.2
Q ss_pred hhHHHHHHHhhcCCCcEEEEEe-CCCChhHHhhhHHH---HHHHHHhcCCeEEEEEECCCCH-----------HHHHHhC
Q 031608 84 DHLDQILLRAQELSQPILIDWM-ASWCRKCIYLKPKL---EKLAAEFDTKLKFYYVDVNKVS-----------KDLVKRG 148 (156)
Q Consensus 84 ~~~~~~l~~a~~~~k~vlV~F~-A~WC~~Ck~~~p~l---~~la~~~~~~v~~~~vd~d~~~-----------~l~~~~~ 148 (156)
+++++.+..+...|++++|+|| |+||++|+.+.|.+ .++.+.++.++.++.||+++.+ +++++|+
T Consensus 34 ~~~~~~~~~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~ 113 (154)
T 2ju5_A 34 ESYAEALEHSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGVHLHMVEVDFPQKNHQPEEQRQKNQELKAQYK 113 (154)
T ss_dssp ECHHHHHHHHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEECCSSCCCCHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcCcEEEEEecCccccCCChhhHhhHHHHHHHcC
Confidence 3566666655567999999999 99999999999999 7887666456999999998754 8899999
Q ss_pred Cccceec
Q 031608 149 NISVSIQ 155 (156)
Q Consensus 149 i~sv~~~ 155 (156)
|.++|+.
T Consensus 114 v~~~Pt~ 120 (154)
T 2ju5_A 114 VTGFPEL 120 (154)
T ss_dssp CCSSSEE
T ss_pred CCCCCEE
Confidence 9999874
No 104
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.50 E-value=6.8e-14 Score=114.83 Aligned_cols=75 Identities=13% Similarity=0.045 Sum_probs=63.6
Q ss_pred ceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhh------HHHHHHHHHhcC-CeEEEEEECCCCHHHHHHhC
Q 031608 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLK------PKLEKLAAEFDT-KLKFYYVDVNKVSKDLVKRG 148 (156)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~------p~l~~la~~~~~-~v~~~~vd~d~~~~l~~~~~ 148 (156)
.+..++ .++|++++. .+++++|+|||+||+||+... |.++++++.+.+ ++.|++||+++++++|++|+
T Consensus 14 ~v~~lt-~~~f~~~i~----~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~ 88 (367)
T 3us3_A 14 RVINVN-AKNYKNVFK----KYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKDAAVAKKLG 88 (367)
T ss_dssp CCEECC-TTTHHHHHH----HCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTTTHHHHHHHT
T ss_pred ccEECC-HHHHHHHHh----hCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcccHHHHHHcC
Confidence 355664 668999994 489999999999999974433 789999998875 59999999999999999999
Q ss_pred Cccceec
Q 031608 149 NISVSIQ 155 (156)
Q Consensus 149 i~sv~~~ 155 (156)
|.++|+-
T Consensus 89 V~~~PTl 95 (367)
T 3us3_A 89 LTEEDSI 95 (367)
T ss_dssp CCSTTEE
T ss_pred CCcCceE
Confidence 9999863
No 105
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=99.24 E-value=2e-15 Score=105.56 Aligned_cols=62 Identities=6% Similarity=0.135 Sum_probs=55.7
Q ss_pred cCCCcEEEEEeCCCChhHHhhhHHH---HHHHHHhcCCeEEEEEECC--CCHHHHHHhCCccceecC
Q 031608 95 ELSQPILIDWMASWCRKCIYLKPKL---EKLAAEFDTKLKFYYVDVN--KVSKDLVKRGNISVSIQI 156 (156)
Q Consensus 95 ~~~k~vlV~F~A~WC~~Ck~~~p~l---~~la~~~~~~v~~~~vd~d--~~~~l~~~~~i~sv~~~~ 156 (156)
..++++||+|||+||++|+.+.|.+ +++++.+++++.++.||++ ++.+++++|+|.++|+.+
T Consensus 17 ~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~ 83 (130)
T 2lst_A 17 AHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEARFVVASVSVDTPEGQELARRYRVPGTPTFV 83 (130)
Confidence 5789999999999999999999999 9999888767999999994 678999999999998753
No 106
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.49 E-value=3.8e-14 Score=103.77 Aligned_cols=84 Identities=13% Similarity=0.213 Sum_probs=65.9
Q ss_pred chhccccCCC-CCCCccceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcC--CeEEEEEE
Q 031608 60 VRVEALWPDL-SRPTSVELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDT--KLKFYYVD 136 (156)
Q Consensus 60 ~~~~~~~~~~-~~p~~~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~--~v~~~~vd 136 (156)
..++..+|++ .+....+ .+... ++ .||++||+|||+||++|+.+.|.|+++++++++ ++.++.|+
T Consensus 22 ~~vG~~~P~f~~l~~~~g--~v~l~-~~---------~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~ 89 (165)
T 3s9f_A 22 SGVAKHLGEALKLRKQAD--TADMD-SL---------SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILAS 89 (165)
T ss_dssp CHHHHHHHHTSCEEETTE--EECSG-GG---------TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEE
T ss_pred hhhcccCCcceeeecCCC--cccHH-Hc---------CCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEe
Confidence 3456666666 4544332 44433 33 589999999999999999999999999999975 69999999
Q ss_pred CCCC------------------------HHHHHHhCCccceec
Q 031608 137 VNKV------------------------SKDLVKRGNISVSIQ 155 (156)
Q Consensus 137 ~d~~------------------------~~l~~~~~i~sv~~~ 155 (156)
+|+. .++++.|+|.++|+.
T Consensus 90 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~Pt~ 132 (165)
T 3s9f_A 90 WDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYSVESIPTL 132 (165)
T ss_dssp CCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTCCSSSEE
T ss_pred cCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcCCCCCCEE
Confidence 9877 678889999888864
No 107
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.48 E-value=1.9e-14 Score=105.29 Aligned_cols=77 Identities=16% Similarity=0.174 Sum_probs=57.4
Q ss_pred ecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHH--HhcCCeEEEEEECC-CCHHHHHHhCCccceec
Q 031608 79 PINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAA--EFDTKLKFYYVDVN-KVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 79 ~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~--~~~~~v~~~~vd~d-~~~~l~~~~~i~sv~~~ 155 (156)
.|....++++.+..|...+++|||+|||+||++|+.+.|.+.+..+ ++.+ ..|+.||+| +..+++.++++.++|+.
T Consensus 26 ~i~W~~~~~~al~~A~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~-~~fv~V~vD~e~~~~~~~~~v~~~PT~ 104 (151)
T 3ph9_A 26 DITWVQTYEEGLFYAQKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQ-NKFIMLNLMHETTDKNLSPDGQYVPRI 104 (151)
T ss_dssp TSCCCSSHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHH-HTCEEEEESSCCSCGGGCTTCCCSSEE
T ss_pred CCcchhCHHHHHHHHHHcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhh-cCeEEEEecCCchhhHhhcCCCCCCEE
Confidence 3555567888887777789999999999999999999999976422 2211 245566664 45567888999999875
Q ss_pred C
Q 031608 156 I 156 (156)
Q Consensus 156 ~ 156 (156)
+
T Consensus 105 ~ 105 (151)
T 3ph9_A 105 M 105 (151)
T ss_dssp E
T ss_pred E
Confidence 3
No 108
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.48 E-value=3.3e-14 Score=100.84 Aligned_cols=72 Identities=11% Similarity=0.109 Sum_probs=64.2
Q ss_pred EecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCcc--ceec
Q 031608 78 EPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS--VSIQ 155 (156)
Q Consensus 78 ~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~s--v~~~ 155 (156)
.++ +.++|++++ ..+.+++|+|||+ |++|+.+.|.|++++++|.+++.|++||++++++++..|||.+ +|+-
T Consensus 9 ~~~-t~~~f~~~~----~~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~gk~~f~~vd~d~~~~~a~~~gi~~~~iPtl 82 (133)
T 2djk_A 9 GEI-GPETYSDYM----SAGIPLAYIFAET-AEERKELSDKLKPIAEAQRGVINFGTIDAKAFGAHAGNLNLKTDKFPAF 82 (133)
T ss_dssp EEC-CHHHHHHHH----HTTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTTTSEEEEECTTTTGGGTTTTTCCSSSSSEE
T ss_pred ecc-ChHHHHHHh----cCCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCCeEEEEEEchHHhHHHHHHcCCCcccCCEE
Confidence 445 466898887 4688999999999 8999999999999999998889999999999999999999999 8753
No 109
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.48 E-value=1.8e-13 Score=96.72 Aligned_cols=82 Identities=15% Similarity=0.275 Sum_probs=63.0
Q ss_pred hccccCCC-CCCCccceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhc--CCeEEEEEECC
Q 031608 62 VEALWPDL-SRPTSVELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFD--TKLKFYYVDVN 138 (156)
Q Consensus 62 ~~~~~~~~-~~p~~~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~--~~v~~~~vd~d 138 (156)
.+..+|++ .+....+ .+... ++ .|+++||+|||+||++|+.+.|.+.+++++++ .++.++.|++|
T Consensus 4 ~g~~~p~~~~l~~~~g--~~~l~-~~---------~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d 71 (144)
T 1o73_A 4 LAKYLPGATNLLSKSG--EVSLG-SL---------VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWD 71 (144)
T ss_dssp GGGTSCTTCCBBCTTS--CBCSG-GG---------TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECC
T ss_pred hhhhCccceEeecCCC--cCcHH-Hh---------CCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCC
Confidence 34556665 5555433 44433 22 58999999999999999999999999999997 46999999998
Q ss_pred CC------------------------HHHHHHhCCccceec
Q 031608 139 KV------------------------SKDLVKRGNISVSIQ 155 (156)
Q Consensus 139 ~~------------------------~~l~~~~~i~sv~~~ 155 (156)
.. .+++++|+|.++|+.
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~Pt~ 112 (144)
T 1o73_A 72 ENESDFHDYYGKMPWLALPFDQRSTVSELGKTFGVESIPTL 112 (144)
T ss_dssp SSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHTCCSSSEE
T ss_pred CCHHHHHHHHHhCCceEeeccchhHHHHHHHHcCCCCCCEE
Confidence 64 367888999888763
No 110
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.48 E-value=7.3e-15 Score=101.10 Aligned_cols=54 Identities=20% Similarity=0.250 Sum_probs=46.5
Q ss_pred CCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECC------CCHHHHHHhCCccceec
Q 031608 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVN------KVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 96 ~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d------~~~~l~~~~~i~sv~~~ 155 (156)
.+++++|+|||+||++|+.++|.|++++++++ .||++ ++++++++|+|.++|+.
T Consensus 11 ~~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~------~v~~~~~~~~~~~~~l~~~~~V~~~PT~ 70 (106)
T 3kp8_A 11 LRQIGGTMYGAYWCPHCQDQKELFGAAFDQVP------YVECSPNGPGTPQAQECTEAGITSYPTW 70 (106)
T ss_dssp HHHHTCEEEECTTCHHHHHHHHHHGGGGGGSC------EEESCTTCTTSCCCHHHHHTTCCSSSEE
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHHHHHhCC------EEEEecccccchhHHHHHHcCCeEeCEE
Confidence 47888999999999999999999999987664 34554 68899999999999974
No 111
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.48 E-value=1.3e-13 Score=122.40 Aligned_cols=118 Identities=14% Similarity=0.149 Sum_probs=83.8
Q ss_pred CCccCCCCCccccccCCc-----eEEEeCCCccccccccchhccccCCCCCCCccceEecCChhhHHHHHHHhhcCCCcE
Q 031608 26 QPWSSGSSSCLLLQKNSA-----FFWVDTASRSKSARRDVRVEALWPDLSRPTSVELEPINDSDHLDQILLRAQELSQPI 100 (156)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~r~~~~~~~~~~~~~p~~~~~~~i~~~~~~~~~l~~a~~~~k~v 100 (156)
..+.+.|+|++.+-+... ...|.|.. +.......|.....++ .+..++ .++|++.+. ..++++
T Consensus 611 ~~~~v~~~Pti~~~~~~~~~~~~~~~y~g~~------~~~~~l~~fi~~~~~~--~v~~l~-~~~~~~~~~---~~~~~v 678 (780)
T 3apo_A 611 TQENVQRYPEIRFYPQKSSKAYQYHSYNGWN------RDAYSLRSWGLGFLPQ--ASIDLT-PQTFNEKVL---QGKTHW 678 (780)
T ss_dssp HHTTCCSSSEEEEECCCSSSCCSCEECCCSC------CSHHHHHHHHHTTSCC--CSEEEC-HHHHHHHTT---TCSSCE
T ss_pred HHcCCCCCCeEEEEcCCCcCccchhhcCCCC------CCHHHHHHHHhhhccc--ccccCC-HHHHHHHHh---cCCCeE
Confidence 346777888887644422 23344311 1222222222222232 245554 567876553 468999
Q ss_pred EEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 101 LIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 101 lV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
+|+|||+||++|+.+.|.++++++++.+++.|+.||++++++++++|+|.++|+.
T Consensus 679 ~v~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 733 (780)
T 3apo_A 679 VVDFYAPWSGPSQNFAPEFELLARMIKGKVRAGKVDCQAYPQTCQKAGIKAYPSV 733 (780)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHhcCCceEEEEECCCCHHHHHhcCCCcCCEE
Confidence 9999999999999999999999999977899999999999999999999999874
No 112
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.47 E-value=1e-13 Score=99.22 Aligned_cols=84 Identities=15% Similarity=0.193 Sum_probs=65.0
Q ss_pred hhccccCCCCCCCccceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcC-CeEEEEEECCC
Q 031608 61 RVEALWPDLSRPTSVELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVNK 139 (156)
Q Consensus 61 ~~~~~~~~~~~p~~~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~-~v~~~~vd~d~ 139 (156)
.++...|++.+++.. ...+... ++ .|++++|+|||+||++|+.+.|.+.++++++++ ++.++.|++++
T Consensus 4 ~~g~~~p~f~l~~~~-G~~~~l~-~~---------~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~ 72 (152)
T 2lrn_A 4 ATGSVAPAITGIDLK-GNSVSLN-DF---------KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDR 72 (152)
T ss_dssp CTTEECCCCEEECSS-SCEEESG-GG---------TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCS
T ss_pred cCCCcCCCceeEcCC-CCEEeHH-Hc---------CCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccC
Confidence 455666777665532 2333322 22 589999999999999999999999999999976 49999999987
Q ss_pred -------------------------CHHHHHHhCCccceec
Q 031608 140 -------------------------VSKDLVKRGNISVSIQ 155 (156)
Q Consensus 140 -------------------------~~~l~~~~~i~sv~~~ 155 (156)
+.++++.|+|.++|..
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~ 113 (152)
T 2lrn_A 73 REEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYCIVGFPHI 113 (152)
T ss_dssp CHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTTCCSSCEE
T ss_pred CHHHHHHHHHHhCCCCeEEecccchhHHHHHHhCCCcCCeE
Confidence 4678889999888763
No 113
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.46 E-value=7.5e-14 Score=98.49 Aligned_cols=85 Identities=11% Similarity=0.102 Sum_probs=67.5
Q ss_pred chhccccCCCCCCCccceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcC-CeEEEEEECC
Q 031608 60 VRVEALWPDLSRPTSVELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVN 138 (156)
Q Consensus 60 ~~~~~~~~~~~~p~~~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~-~v~~~~vd~d 138 (156)
+.++..+|++.+.+. ....+... ++ .|+++||+||++||++|+.+.|.+.++++++++ ++.++.|+++
T Consensus 5 ~~~G~~~p~~~l~~~-~g~~~~l~-~~---------~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d 73 (148)
T 3hcz_A 5 LLLGKKAPNLYMTDT-TGTYRYLY-DV---------QAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIE 73 (148)
T ss_dssp CCTTSBCCCCCCBCT-TSCBCCGG-GC---------CCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred cCCCCcCCceEEecC-CCCEEEhH-Hc---------CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEec
Confidence 456777788877664 22333322 22 589999999999999999999999999999976 4999999999
Q ss_pred CCHH-------------------------HHHHhCCccceec
Q 031608 139 KVSK-------------------------DLVKRGNISVSIQ 155 (156)
Q Consensus 139 ~~~~-------------------------l~~~~~i~sv~~~ 155 (156)
+.++ +++.|++.++|..
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i~~~P~~ 115 (148)
T 3hcz_A 74 RKDEEWLKFIRSKKIGGWLNVRDSKNHTDFKITYDIYATPVL 115 (148)
T ss_dssp SSSHHHHHHHHHHTCTTSEEEECTTCCCCHHHHHCCCSSCEE
T ss_pred CCHHHHHHHHHHcCCCCceEEeccccchhHHHhcCcCCCCEE
Confidence 8777 8888998888753
No 114
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.46 E-value=1.7e-13 Score=97.12 Aligned_cols=71 Identities=13% Similarity=0.159 Sum_probs=54.0
Q ss_pred cchhccccCCCCCCCccceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcC-CeEEEEEEC
Q 031608 59 DVRVEALWPDLSRPTSVELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDV 137 (156)
Q Consensus 59 ~~~~~~~~~~~~~p~~~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~-~v~~~~vd~ 137 (156)
.+.++..+|++.+ +. ....+... ++ .||++||+|||+||++|+.+.|.+.+++++|++ ++.++.|++
T Consensus 6 ~l~~G~~~P~f~l-~~-~g~~~~l~-~~---------~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~ 73 (143)
T 4fo5_A 6 GVNPGDLAPRIEF-LG-NDAKASFH-NQ---------LGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISM 73 (143)
T ss_dssp SSSTTSBCCCCCC-------CCCSC-CS---------SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEEC
T ss_pred ccCCcccCCceEE-cC-CCCEEEHH-Hh---------CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEc
Confidence 4566778888887 43 33344333 22 589999999999999999999999999999974 599999999
Q ss_pred CCCH
Q 031608 138 NKVS 141 (156)
Q Consensus 138 d~~~ 141 (156)
|..+
T Consensus 74 d~~~ 77 (143)
T 4fo5_A 74 DEKE 77 (143)
T ss_dssp CSCH
T ss_pred cCCH
Confidence 8644
No 115
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.46 E-value=6.6e-15 Score=108.18 Aligned_cols=61 Identities=18% Similarity=0.287 Sum_probs=51.2
Q ss_pred cCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHH-HHHHhCC--ccceec
Q 031608 95 ELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSK-DLVKRGN--ISVSIQ 155 (156)
Q Consensus 95 ~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~-l~~~~~i--~sv~~~ 155 (156)
..++++||+|||+||++|+.+.|.|+++++.+..++.|+.||++++++ ++..+++ .++|+.
T Consensus 44 ~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~Pt~ 107 (164)
T 1sen_A 44 ASGLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLEDEEEPKDEDFSPDGGYIPRI 107 (164)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHHTTSEEEEEEGGGSCSCGGGCTTCSCSSEE
T ss_pred hcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCeEEEEEecCCchHHHHHhcccCCcCCeE
Confidence 569999999999999999999999999877665457888899887776 7788888 667764
No 116
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.46 E-value=1.1e-13 Score=88.13 Aligned_cols=53 Identities=13% Similarity=0.263 Sum_probs=48.7
Q ss_pred EEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 100 ILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 100 vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
..|+|||+||++|+.+.|.++++++++++++.++.+| +++++++|||.++|+.
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~---~~~~~~~~~v~~~Pt~ 54 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELGIDAEFEKIK---EMDQILEAGLTALPGL 54 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTTCCEEEEEEC---SHHHHHHHTCSSSSCE
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcCCceEEEEec---CHHHHHHCCCCcCCEE
Confidence 4689999999999999999999999998779999998 8899999999999875
No 117
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.45 E-value=1.2e-13 Score=97.39 Aligned_cols=87 Identities=17% Similarity=0.319 Sum_probs=65.9
Q ss_pred cchhccccCCCCCCCccceEecCCh-hhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHh-cC-CeEEEEE
Q 031608 59 DVRVEALWPDLSRPTSVELEPINDS-DHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEF-DT-KLKFYYV 135 (156)
Q Consensus 59 ~~~~~~~~~~~~~p~~~~~~~i~~~-~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~-~~-~v~~~~v 135 (156)
.+.++..+|++...+.. ...+... +++ .|+++||+||++||++|+.+.|.+.++++++ .+ ++.++.|
T Consensus 4 ~~~~g~~~p~~~l~~~~-g~~~~l~~~~~---------~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v 73 (148)
T 3fkf_A 4 KVTVGKSAPYFSLPNEK-GEKLSRSAERF---------RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGI 73 (148)
T ss_dssp -CCTTSBCCCCCEEBTT-SCEECTTSTTT---------TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEE
T ss_pred cccCCCcCCCeEeeCCC-CCEEecccccc---------CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEE
Confidence 35567777777766542 2233222 022 5899999999999999999999999999999 65 4999999
Q ss_pred ECCCCH-------------------------HHHHHhCCccceec
Q 031608 136 DVNKVS-------------------------KDLVKRGNISVSIQ 155 (156)
Q Consensus 136 d~d~~~-------------------------~l~~~~~i~sv~~~ 155 (156)
+++..+ ++++.|++.++|+.
T Consensus 74 ~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~ 118 (148)
T 3fkf_A 74 SLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQYAILTLPTN 118 (148)
T ss_dssp ECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTTCCSSSEE
T ss_pred ECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhcCCCCcCEE
Confidence 998744 78889999888763
No 118
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.45 E-value=1.5e-13 Score=97.72 Aligned_cols=60 Identities=15% Similarity=0.267 Sum_probs=52.9
Q ss_pred CCCcEEEEEeCCCChhHHhhhHHHHHHHHHhc--CCeEEEEEECCCC------------------------HHHHHHhCC
Q 031608 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFD--TKLKFYYVDVNKV------------------------SKDLVKRGN 149 (156)
Q Consensus 96 ~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~--~~v~~~~vd~d~~------------------------~~l~~~~~i 149 (156)
.|+++||+|||+||++|+.+.|.+++++++++ .++.++.|++|+. .+++++|+|
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 106 (146)
T 1o8x_A 27 AGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFNV 106 (146)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTTC
T ss_pred CCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhCC
Confidence 58999999999999999999999999999997 3699999999864 467888999
Q ss_pred ccceec
Q 031608 150 ISVSIQ 155 (156)
Q Consensus 150 ~sv~~~ 155 (156)
.++|+.
T Consensus 107 ~~~Pt~ 112 (146)
T 1o8x_A 107 ESIPTL 112 (146)
T ss_dssp CSSSEE
T ss_pred CCCCEE
Confidence 888753
No 119
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.45 E-value=1.3e-13 Score=115.92 Aligned_cols=74 Identities=18% Similarity=0.388 Sum_probs=64.3
Q ss_pred eEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcC--CeEEEEEECCCCHHHHHHhCCcccee
Q 031608 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDT--KLKFYYVDVNKVSKDLVKRGNISVSI 154 (156)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~--~v~~~~vd~d~~~~l~~~~~i~sv~~ 154 (156)
+..+. .++|++++. ..+++++|+|||+||++|+.+.|.++++++.+.+ ++.++++|++.+ +++.+|+|.++|+
T Consensus 354 v~~~~-~~~~~~~~~---~~~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~~v~~~~id~~~~-~~~~~~~v~~~Pt 428 (481)
T 3f8u_A 354 VKVVV-AENFDEIVN---NENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATAN-DVPSPYEVRGFPT 428 (481)
T ss_dssp SEEEC-TTTHHHHHT---CTTCEEEEEEECTTBHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTSS-CCCTTCCCCSSSE
T ss_pred eEEec-ccCHHHHhh---cCCCcEEEEEecCcChhHHHhhHHHHHHHHHhccCCCEEEEEEECCch-hhHhhCCCcccCE
Confidence 44444 568988884 4589999999999999999999999999999976 699999999988 8889999999986
Q ss_pred c
Q 031608 155 Q 155 (156)
Q Consensus 155 ~ 155 (156)
-
T Consensus 429 ~ 429 (481)
T 3f8u_A 429 I 429 (481)
T ss_dssp E
T ss_pred E
Confidence 4
No 120
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.44 E-value=2.6e-13 Score=105.69 Aligned_cols=60 Identities=17% Similarity=0.042 Sum_probs=55.0
Q ss_pred CCCcEEEEEeCCCChhHHhhhHHHHHHHHHhc----CCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFD----TKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 96 ~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~----~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
.+++++++|||+||++|+.+.|.+++++..+. +++.+..||++++++++++|+|.++|+-
T Consensus 137 ~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~~~~~~~~~~V~~vPt~ 200 (243)
T 2hls_A 137 KGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYENPDIADKYGVMSVPSI 200 (243)
T ss_dssp CSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred CCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECccCHHHHHHcCCeeeCeE
Confidence 57788999999999999999999999999882 4699999999999999999999999974
No 121
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.44 E-value=1.7e-13 Score=96.53 Aligned_cols=60 Identities=17% Similarity=0.234 Sum_probs=53.3
Q ss_pred CCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEEC---------------------------CCCHHHHHHhC
Q 031608 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDV---------------------------NKVSKDLVKRG 148 (156)
Q Consensus 96 ~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~---------------------------d~~~~l~~~~~ 148 (156)
.|++++|.||++||++|+.+.|.++++++++++++.|+.|++ +.+.++++.|+
T Consensus 28 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 107 (148)
T 2b5x_A 28 GEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHDITQPIFVDSDHALTDAFE 107 (148)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEECCCSTTTSSHHHHHHHHHHTTCCSCEEECSSCHHHHHTC
T ss_pred CCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCCcEEEEEEcCCCccccCHHHHHHHHHHcCCCcceEECCchhHHHHhC
Confidence 589999999999999999999999999999986699999995 44568899999
Q ss_pred Cccceec
Q 031608 149 NISVSIQ 155 (156)
Q Consensus 149 i~sv~~~ 155 (156)
+.++|+.
T Consensus 108 v~~~P~~ 114 (148)
T 2b5x_A 108 NEYVPAY 114 (148)
T ss_dssp CCCSSEE
T ss_pred CCCCCEE
Confidence 9988764
No 122
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.44 E-value=1.8e-13 Score=96.89 Aligned_cols=73 Identities=11% Similarity=0.048 Sum_probs=54.8
Q ss_pred chhccccCCCCCCCccceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHH---HHHHhcC-CeEEEEE
Q 031608 60 VRVEALWPDLSRPTSVELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEK---LAAEFDT-KLKFYYV 135 (156)
Q Consensus 60 ~~~~~~~~~~~~p~~~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~---la~~~~~-~v~~~~v 135 (156)
..++..+|++.++...+ ..+... ++ .|+++||+|||+||++|+.+.|.+.+ +++++.+ ++.++.|
T Consensus 5 ~~~G~~ap~f~l~~~~g-~~~~l~-~~---------~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i 73 (142)
T 3eur_A 5 NRLGTKALNFTYTLDSG-VKGTLY-QF---------PAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSI 73 (142)
T ss_dssp TCTTSBCCCCEEEETTS-CEEETT-TC---------CCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEE
T ss_pred hcCCCccCCcEEEcCCC-CEeeHH-Hc---------CCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEE
Confidence 35566777776655322 222212 22 58999999999999999999999999 9998854 6999999
Q ss_pred ECCCCHHH
Q 031608 136 DVNKVSKD 143 (156)
Q Consensus 136 d~d~~~~l 143 (156)
+.++..+.
T Consensus 74 ~~d~~~~~ 81 (142)
T 3eur_A 74 YPDEELDE 81 (142)
T ss_dssp ECSSCHHH
T ss_pred EcCCCHHH
Confidence 99887554
No 123
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.43 E-value=1.8e-13 Score=121.45 Aligned_cols=75 Identities=15% Similarity=0.161 Sum_probs=60.2
Q ss_pred ceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
.+..+ +.++|++++ .++++++|+|||+||++|+.+.|.|+++++++.+.+.|++||++++++++++|+|.++|+-
T Consensus 117 ~v~~l-~~~~f~~~i----~~~~~~lv~Fya~wC~~C~~~~p~~~~~a~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~ 191 (780)
T 3apo_A 117 EIITL-ERREFDAAV----NSGELWFVNFYSPGSSHSHDLAPTWREFAKEVDGLLRIGAVNCGDDRMLCRMKGVNSYPSL 191 (780)
T ss_dssp TEEEC-CHHHHHHHH----TSSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCSSCC--------CEE
T ss_pred ceeee-chHhHHhhh----cCCCcEEEEEeCCCCcchhHhhHHHHHHHHHhcCceEEEEEeCCCcHHHHHHcCCceeeeE
Confidence 45555 577999999 5799999999999999999999999999999987799999999999999999999999863
No 124
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.43 E-value=3.8e-13 Score=95.26 Aligned_cols=60 Identities=12% Similarity=0.205 Sum_probs=53.0
Q ss_pred CCCcEEEEEeCCCChhHHhhhHHHHHHHHHhc--CCeEEEEEECCCC------------------------HHHHHHhCC
Q 031608 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFD--TKLKFYYVDVNKV------------------------SKDLVKRGN 149 (156)
Q Consensus 96 ~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~--~~v~~~~vd~d~~------------------------~~l~~~~~i 149 (156)
.|+++||+|||+||++|+.+.|.+++++++++ .++.++.|++++. .+++++|+|
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 106 (144)
T 1i5g_A 27 AGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLTTGFDV 106 (144)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHHHHcCC
Confidence 58999999999999999999999999999997 3799999999864 467888999
Q ss_pred ccceec
Q 031608 150 ISVSIQ 155 (156)
Q Consensus 150 ~sv~~~ 155 (156)
.++|..
T Consensus 107 ~~~P~~ 112 (144)
T 1i5g_A 107 KSIPTL 112 (144)
T ss_dssp CSSSEE
T ss_pred CCCCEE
Confidence 888753
No 125
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.42 E-value=3.9e-13 Score=96.80 Aligned_cols=82 Identities=12% Similarity=0.079 Sum_probs=61.9
Q ss_pred hccccCCCCCCCccceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcC-CeEEEEEECCCC
Q 031608 62 VEALWPDLSRPTSVELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVNKV 140 (156)
Q Consensus 62 ~~~~~~~~~~p~~~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~-~v~~~~vd~d~~ 140 (156)
.+..+|++.+++.. ...+... ++ .|+++||+|||+||++|+.+.|.+.++++++++ ++.++.|++|..
T Consensus 11 ~g~~~p~f~l~~~~-G~~~~l~-~~---------~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~ 79 (152)
T 2lrt_A 11 KEASIIDIQLKDLK-GNTRSLT-DL---------KGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGD 79 (152)
T ss_dssp CTTCSCCCCEEBTT-SCEECTT-TG---------GGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCC
T ss_pred cCCCCCCeEEEcCC-CCEEeHH-Hh---------CCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCC
Confidence 34556666665432 2333322 22 489999999999999999999999999999976 499999999987
Q ss_pred HH-----------------------HHHHhCCcccee
Q 031608 141 SK-----------------------DLVKRGNISVSI 154 (156)
Q Consensus 141 ~~-----------------------l~~~~~i~sv~~ 154 (156)
.+ +++.|++.++|.
T Consensus 80 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~ 116 (152)
T 2lrt_A 80 EHFWKTSADNLPWVCVRDANGAYSSYISLYNVTNLPS 116 (152)
T ss_dssp HHHHHHHHTTCSSEEEECSSGGGCHHHHHHTCCSCSE
T ss_pred HHHHHHHHhCCCceEEECCCCcchHHHHHcCcccCce
Confidence 65 667777777664
No 126
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.42 E-value=1.4e-13 Score=97.02 Aligned_cols=71 Identities=11% Similarity=0.137 Sum_probs=53.5
Q ss_pred hccccCCCCCCCccceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHH---HHHHhcC-CeEEEEEEC
Q 031608 62 VEALWPDLSRPTSVELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEK---LAAEFDT-KLKFYYVDV 137 (156)
Q Consensus 62 ~~~~~~~~~~p~~~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~---la~~~~~-~v~~~~vd~ 137 (156)
+|..+|++.++... ...+... ++ .|+++||+|||+||++|+.+.|.+.+ +.+++++ ++.++.|++
T Consensus 3 ~G~~~p~f~l~~~~-g~~~~l~-~~---------~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~ 71 (142)
T 3ewl_A 3 AGMKAADFTYVTVH-GDNSRMS-RL---------KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYP 71 (142)
T ss_dssp TTSBCCCCEEECTT-CCEEEGG-GC---------CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEEC
T ss_pred CCCcCCCCEEECCC-CCEEEhh-hc---------CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEe
Confidence 45666777666542 2233222 22 58999999999999999999999988 8888864 599999999
Q ss_pred CCCHHH
Q 031608 138 NKVSKD 143 (156)
Q Consensus 138 d~~~~l 143 (156)
|+.++.
T Consensus 72 d~~~~~ 77 (142)
T 3ewl_A 72 DENREE 77 (142)
T ss_dssp SSCHHH
T ss_pred cCCHHH
Confidence 977665
No 127
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.41 E-value=6.7e-13 Score=95.64 Aligned_cols=86 Identities=26% Similarity=0.374 Sum_probs=67.5
Q ss_pred ccchhccccCCCCCCCccceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhc-CCeEEEEEE
Q 031608 58 RDVRVEALWPDLSRPTSVELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFD-TKLKFYYVD 136 (156)
Q Consensus 58 r~~~~~~~~~~~~~p~~~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~-~~v~~~~vd 136 (156)
..+.++...|++..+... ...+... ++ .|+++||+||++||++|+.+.|.+.+++++++ .++.++.|+
T Consensus 13 ~~~~~G~~~p~f~l~~~~-g~~~~l~-~~---------~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~ 81 (158)
T 3hdc_A 13 PLVRTGALAPNFKLPTLS-GENKSLA-QY---------RGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVN 81 (158)
T ss_dssp CCCCTTSBCCCCEEECTT-SCEEESG-GG---------TTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEE
T ss_pred cccCCCCcCCCceeEcCC-CCEEehH-Hh---------CCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEe
Confidence 345566777777665542 2333222 22 58999999999999999999999999999997 469999999
Q ss_pred CCC-------------------CHHHHHHhCCcccee
Q 031608 137 VNK-------------------VSKDLVKRGNISVSI 154 (156)
Q Consensus 137 ~d~-------------------~~~l~~~~~i~sv~~ 154 (156)
.+. ..++++.|++.++|.
T Consensus 82 ~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~ 118 (158)
T 3hdc_A 82 VEKRFPEKYRRAPVSFNFLSDATGQVQQRYGANRLPD 118 (158)
T ss_dssp CSSSCCGGGGGCCCSCEEEECTTSHHHHHTTCCSSSE
T ss_pred CCHHHHHHHHHcCCCceEEECchHHHHHHhCCCCcce
Confidence 987 678999999998886
No 128
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.40 E-value=7.3e-13 Score=94.52 Aligned_cols=86 Identities=15% Similarity=0.220 Sum_probs=66.2
Q ss_pred cchhccccCCCCCCCccceEecCCh-hhHHHHHHHhhcCCCcEEEEEeCCCChh--HHhhhHHHHHHHHHh-cC-CeEEE
Q 031608 59 DVRVEALWPDLSRPTSVELEPINDS-DHLDQILLRAQELSQPILIDWMASWCRK--CIYLKPKLEKLAAEF-DT-KLKFY 133 (156)
Q Consensus 59 ~~~~~~~~~~~~~p~~~~~~~i~~~-~~~~~~l~~a~~~~k~vlV~F~A~WC~~--Ck~~~p~l~~la~~~-~~-~v~~~ 133 (156)
.+.++..+|++.++... ...+... +++ .|+++||+|||+||++ |+.+.|.+.+++++| .+ ++.++
T Consensus 4 ~l~~G~~~p~f~l~~~~-g~~~~l~~~~~---------~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v 73 (150)
T 3fw2_A 4 KSEIGKYAPFFSLPNAK-GEKITRSSDAF---------KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGML 73 (150)
T ss_dssp TTSTTSBCCCCCEEBTT-CCEECTTSTTT---------TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEE
T ss_pred cccCCCcCCccEeECCC-CCEEecchhhh---------CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEE
Confidence 35667778888776642 2333322 022 5899999999999999 999999999999999 55 49999
Q ss_pred EEECCCCH-------------------------HHHHHhCCcccee
Q 031608 134 YVDVNKVS-------------------------KDLVKRGNISVSI 154 (156)
Q Consensus 134 ~vd~d~~~-------------------------~l~~~~~i~sv~~ 154 (156)
.|++|+.+ ++++.|++.++|.
T Consensus 74 ~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~ 119 (150)
T 3fw2_A 74 GISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVAKQYSIYKIPA 119 (150)
T ss_dssp EEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTTCCSSSE
T ss_pred EEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHHHHcCCCccCe
Confidence 99998765 6777888887765
No 129
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.40 E-value=3.3e-13 Score=109.49 Aligned_cols=73 Identities=14% Similarity=0.380 Sum_probs=62.6
Q ss_pred eEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcC--CeEEEEEECCCCHHHHHHhCCcccee
Q 031608 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDT--KLKFYYVDVNKVSKDLVKRGNISVSI 154 (156)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~--~v~~~~vd~d~~~~l~~~~~i~sv~~ 154 (156)
+..++ .++|++++. ..+++++|+|||+||++|+.+.|.|+++++.+++ ++.++.+|++.+. +.+|+|.++|+
T Consensus 251 v~~l~-~~~f~~~~~---~~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~~~--~~~~~v~~~Pt 324 (361)
T 3uem_A 251 VKVLV-GKNFEDVAF---DEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANE--VEAVKVHSFPT 324 (361)
T ss_dssp SEEEC-TTTHHHHHT---CTTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTTCB--CSSCCCCSSSE
T ss_pred cEEee-cCchhhhcc---cCCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCccc--hhhcCCcccCe
Confidence 45554 558888874 4689999999999999999999999999999976 4999999998877 67899999886
Q ss_pred c
Q 031608 155 Q 155 (156)
Q Consensus 155 ~ 155 (156)
-
T Consensus 325 ~ 325 (361)
T 3uem_A 325 L 325 (361)
T ss_dssp E
T ss_pred E
Confidence 3
No 130
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.40 E-value=7.1e-13 Score=92.14 Aligned_cols=59 Identities=15% Similarity=0.213 Sum_probs=53.8
Q ss_pred CCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCC----------------------CHHHHHHhCCccce
Q 031608 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNK----------------------VSKDLVKRGNISVS 153 (156)
Q Consensus 96 ~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~----------------------~~~l~~~~~i~sv~ 153 (156)
.|++++|.||++||++|+.+.|.+++++++++ ++.++.|++++ +.+++++|++.++|
T Consensus 23 ~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~P 101 (136)
T 1lu4_A 23 QGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP-AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYNVPWQP 101 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTTCCSSS
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHCC-CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHhcCCCCCC
Confidence 58999999999999999999999999999998 79999999987 67888899998887
Q ss_pred ec
Q 031608 154 IQ 155 (156)
Q Consensus 154 ~~ 155 (156)
+.
T Consensus 102 ~~ 103 (136)
T 1lu4_A 102 AF 103 (136)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 131
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.40 E-value=7.2e-13 Score=95.29 Aligned_cols=52 Identities=15% Similarity=0.454 Sum_probs=47.9
Q ss_pred CCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcC-CeEEEEEECCCCHHHHHHh
Q 031608 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVNKVSKDLVKR 147 (156)
Q Consensus 96 ~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~-~v~~~~vd~d~~~~l~~~~ 147 (156)
.|+++||+||++||++|+.+.|.+.++++++++ ++.++.|++++.++.+++|
T Consensus 33 ~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~~~~ 85 (165)
T 3or5_A 33 KGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKNY 85 (165)
T ss_dssp TTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHHHHH
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHH
Confidence 589999999999999999999999999999986 4999999999988777777
No 132
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.40 E-value=3.8e-13 Score=96.38 Aligned_cols=43 Identities=21% Similarity=0.356 Sum_probs=39.4
Q ss_pred CCCcEEEEEeCCCChhHHhh-hHHHHHHHHHhcC-CeEEEEEECC
Q 031608 96 LSQPILIDWMASWCRKCIYL-KPKLEKLAAEFDT-KLKFYYVDVN 138 (156)
Q Consensus 96 ~~k~vlV~F~A~WC~~Ck~~-~p~l~~la~~~~~-~v~~~~vd~d 138 (156)
.||++||+|||+||++|+.+ .|.+.+++++|++ ++.|+.|+++
T Consensus 27 ~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~ 71 (158)
T 3eyt_A 27 RGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTV 71 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECC
T ss_pred CCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEec
Confidence 58999999999999999996 9999999999984 6999999964
No 133
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=99.39 E-value=9.2e-13 Score=103.54 Aligned_cols=71 Identities=6% Similarity=-0.033 Sum_probs=61.7
Q ss_pred ceEecCChhhHHHHHHHhhcCCCcEEEEEe--CCCChhHHhhhHHHHHHHHHhc---CCeEEEEEECCC-----CHHHHH
Q 031608 76 ELEPINDSDHLDQILLRAQELSQPILIDWM--ASWCRKCIYLKPKLEKLAAEFD---TKLKFYYVDVNK-----VSKDLV 145 (156)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~--A~WC~~Ck~~~p~l~~la~~~~---~~v~~~~vd~d~-----~~~l~~ 145 (156)
.++.++ .++|++++ ..++++||+|| ||||+ +.|.|+++++++. +++.|++||+++ +++++.
T Consensus 17 ~v~~Lt-~~nF~~vi----~~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~ 87 (248)
T 2c0g_A 17 GCVDLD-ELSFEKTV----ERFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGD 87 (248)
T ss_dssp TCEECC-TTTHHHHH----TTSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHH
T ss_pred CcEECC-HHHHHHHH----hcCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHH
Confidence 345554 56899987 46899999999 99999 9999999999983 469999999998 899999
Q ss_pred HhCCc--cceec
Q 031608 146 KRGNI--SVSIQ 155 (156)
Q Consensus 146 ~~~i~--sv~~~ 155 (156)
+|+|. ++|+.
T Consensus 88 ~~~V~~~~~PTl 99 (248)
T 2c0g_A 88 RYKVDDKNFPSI 99 (248)
T ss_dssp HTTCCTTSCCEE
T ss_pred HhCCCcCCCCeE
Confidence 99999 99874
No 134
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.39 E-value=6.3e-13 Score=94.50 Aligned_cols=59 Identities=17% Similarity=0.389 Sum_probs=52.7
Q ss_pred CCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcC-CeEEEEEECCCCH----------------------HHHHHhCCccc
Q 031608 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVNKVS----------------------KDLVKRGNISV 152 (156)
Q Consensus 96 ~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~-~v~~~~vd~d~~~----------------------~l~~~~~i~sv 152 (156)
.|+++||.||++||++|+.+.|.+.++++++++ ++.++.|+++..+ ++++.|++.++
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 106 (152)
T 3gl3_A 27 TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYGVKGM 106 (152)
T ss_dssp TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTTCCSS
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcCCCCC
Confidence 589999999999999999999999999999976 4999999998766 67778898888
Q ss_pred ee
Q 031608 153 SI 154 (156)
Q Consensus 153 ~~ 154 (156)
|.
T Consensus 107 P~ 108 (152)
T 3gl3_A 107 PT 108 (152)
T ss_dssp SE
T ss_pred Ce
Confidence 76
No 135
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.38 E-value=7.5e-13 Score=94.31 Aligned_cols=59 Identities=14% Similarity=0.332 Sum_probs=52.6
Q ss_pred CCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcC-CeEEEEEECCCC----------------------HHHHHHhCCccc
Q 031608 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVNKV----------------------SKDLVKRGNISV 152 (156)
Q Consensus 96 ~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~-~v~~~~vd~d~~----------------------~~l~~~~~i~sv 152 (156)
.|+++||+||++||++|+.+.|.+.++++++++ ++.++.|++++. .++++.|++.++
T Consensus 25 ~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 104 (151)
T 2f9s_A 25 KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSPL 104 (151)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTCCSS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCCCCC
Confidence 589999999999999999999999999999975 599999999764 478888999888
Q ss_pred ee
Q 031608 153 SI 154 (156)
Q Consensus 153 ~~ 154 (156)
|+
T Consensus 105 P~ 106 (151)
T 2f9s_A 105 PT 106 (151)
T ss_dssp CE
T ss_pred Ce
Confidence 76
No 136
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.38 E-value=9.6e-13 Score=92.26 Aligned_cols=60 Identities=15% Similarity=0.336 Sum_probs=53.6
Q ss_pred CCCcEEEEEeCCCChhHHhhhHHHHHHHHHhc-CCeEEEEEECCC-------------------------CHHHHHHhCC
Q 031608 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFD-TKLKFYYVDVNK-------------------------VSKDLVKRGN 149 (156)
Q Consensus 96 ~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~-~~v~~~~vd~d~-------------------------~~~l~~~~~i 149 (156)
.++++||+||++||++|+.+.|.+.+++++++ .++.++.|+++. +.++++.|++
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 112 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKEYHI 112 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchhHHHhcCc
Confidence 48999999999999999999999999999997 469999999954 6688999999
Q ss_pred ccceec
Q 031608 150 ISVSIQ 155 (156)
Q Consensus 150 ~sv~~~ 155 (156)
.++|..
T Consensus 113 ~~~P~~ 118 (145)
T 3erw_A 113 ITIPTS 118 (145)
T ss_dssp CEESEE
T ss_pred CccCeE
Confidence 988863
No 137
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.38 E-value=5e-13 Score=95.81 Aligned_cols=42 Identities=12% Similarity=0.328 Sum_probs=38.9
Q ss_pred CCCcEEEEEeCCCChhHHh-hhHHHHHHHHHhcC-CeEEEEEEC
Q 031608 96 LSQPILIDWMASWCRKCIY-LKPKLEKLAAEFDT-KLKFYYVDV 137 (156)
Q Consensus 96 ~~k~vlV~F~A~WC~~Ck~-~~p~l~~la~~~~~-~v~~~~vd~ 137 (156)
.||++||+|||+||++|+. +.|.+++++++|++ ++.++.|++
T Consensus 29 ~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~ 72 (160)
T 3lor_A 29 RGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHS 72 (160)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEEC
T ss_pred CCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEec
Confidence 5899999999999999999 59999999999986 499999996
No 138
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.37 E-value=1e-12 Score=93.47 Aligned_cols=60 Identities=20% Similarity=0.291 Sum_probs=53.4
Q ss_pred CCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcC-CeEEEEEECCCCH-----------------------HHHHHhCCcc
Q 031608 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVNKVS-----------------------KDLVKRGNIS 151 (156)
Q Consensus 96 ~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~-~v~~~~vd~d~~~-----------------------~l~~~~~i~s 151 (156)
.|+++||.||++||++|+.+.|.+.++++++++ ++.++.|+++... ++++.|++.+
T Consensus 29 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 108 (152)
T 2lja_A 29 KGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYLING 108 (152)
T ss_dssp TTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTTCCS
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcCcCC
Confidence 589999999999999999999999999999976 5999999998865 6788899888
Q ss_pred ceec
Q 031608 152 VSIQ 155 (156)
Q Consensus 152 v~~~ 155 (156)
+|..
T Consensus 109 ~P~~ 112 (152)
T 2lja_A 109 IPRF 112 (152)
T ss_dssp SCCE
T ss_pred CCEE
Confidence 7753
No 139
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.37 E-value=4.6e-13 Score=101.67 Aligned_cols=72 Identities=17% Similarity=0.213 Sum_probs=60.1
Q ss_pred CChhhHHHHH-HHhhcCCCcEEEEEeCC-CChhHHhhhHHHHHHHHHhcCCeEEEEEECCC--CHHHHHHhCCccceec
Q 031608 81 NDSDHLDQIL-LRAQELSQPILIDWMAS-WCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNK--VSKDLVKRGNISVSIQ 155 (156)
Q Consensus 81 ~~~~~~~~~l-~~a~~~~k~vlV~F~A~-WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~--~~~l~~~~~i~sv~~~ 155 (156)
.+.+++++++ .. ..+..+++.|||+ ||++|+.+.|.++++++. .+++.|+.||+++ +++++++|||.++|+.
T Consensus 7 ~~~~~~~~~~~~~--~~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~-~~~v~~~~vd~~~~~~~~~~~~~~v~~~Pt~ 82 (226)
T 1a8l_A 7 ADKKVIKEEFFSK--MVNPVKLIVFVRKDHCQYCDQLKQLVQELSEL-TDKLSYEIVDFDTPEGKELAKRYRIDRAPAT 82 (226)
T ss_dssp HHHHHHHHHTGGG--CCSCEEEEEEECSSSCTTHHHHHHHHHHHHTT-CTTEEEEEEETTSHHHHHHHHHTTCCSSSEE
T ss_pred HHHHHHHHHHHHh--cCCCeEEEEEecCCCCchhHHHHHHHHHHHhh-CCceEEEEEeCCCcccHHHHHHcCCCcCceE
Confidence 3455677766 32 3456678999999 999999999999999865 4479999999999 9999999999999864
No 140
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.36 E-value=1.6e-12 Score=92.89 Aligned_cols=44 Identities=14% Similarity=0.348 Sum_probs=40.6
Q ss_pred CCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcC-CeEEEEEECCC
Q 031608 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVNK 139 (156)
Q Consensus 96 ~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~-~v~~~~vd~d~ 139 (156)
.|+++||+|||+||++|+.+.|.++++++++.+ ++.++.|++|+
T Consensus 23 ~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~ 67 (151)
T 3raz_A 23 KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDT 67 (151)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSC
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCC
Confidence 589999999999999999999999999999854 69999999974
No 141
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.35 E-value=1.1e-12 Score=95.17 Aligned_cols=86 Identities=15% Similarity=0.221 Sum_probs=61.3
Q ss_pred ccccchhccccCCCCCCCcc-ceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEE
Q 031608 56 ARRDVRVEALWPDLSRPTSV-ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYY 134 (156)
Q Consensus 56 ~~r~~~~~~~~~~~~~p~~~-~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~ 134 (156)
....+.++...|++.+++.. ....+. .+.+ ..|+++||+||++||++|+.+.|.+++++++ ++.++.
T Consensus 18 ~~~~~~~G~~~P~f~l~~~~~~g~~~~-~~~~--------~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~---~v~vv~ 85 (168)
T 2b1k_A 18 NLESALIGKPVPKFRLESLDNPGQFYQ-ADVL--------TQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ---GIRVVG 85 (168)
T ss_dssp -CCCTTTTSBCCCCEEEESSSTTCEEE-GGGG--------CCSSCEEEEEECTTCHHHHHHHHHHHHHHHT---TCCEEE
T ss_pred cccccccCCcCCCeEeecccCCCcEee-hhHh--------cCCCEEEEEEECCCCHHHHHHHHHHHHHHHC---CCEEEE
Confidence 33455677777777665431 112221 1111 3699999999999999999999999999876 488888
Q ss_pred EEC-----------------------CCCHHHHHHhCCccce
Q 031608 135 VDV-----------------------NKVSKDLVKRGNISVS 153 (156)
Q Consensus 135 vd~-----------------------d~~~~l~~~~~i~sv~ 153 (156)
|++ +.+.+++++|+|.++|
T Consensus 86 v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P 127 (168)
T 2b1k_A 86 MNYKDDRQKAISWLKELGNPYALSLFDGDGMLGLDLGVYGAP 127 (168)
T ss_dssp EEESCCHHHHHHHHHHHCCCCSEEEEETTCHHHHHHTCCSSS
T ss_pred EECCCChHHHHHHHHHcCCCCceeeECcchHHHHHcCccccC
Confidence 884 4456788888988887
No 142
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.34 E-value=8.7e-13 Score=97.33 Aligned_cols=87 Identities=17% Similarity=0.379 Sum_probs=63.3
Q ss_pred ccccccchhccccCCCCCCCccc-eEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEE
Q 031608 54 KSARRDVRVEALWPDLSRPTSVE-LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKF 132 (156)
Q Consensus 54 ~~~~r~~~~~~~~~~~~~p~~~~-~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~ 132 (156)
......+.++..+|++.++.... ...+... ++ .|+++||+||++||++|+.+.|.+++++++ ++.+
T Consensus 24 ~~~~~~~~~G~~~P~f~l~~~~g~~~~~~l~-~~---------~gk~vll~F~a~~C~~C~~~~~~l~~l~~~---~v~v 90 (176)
T 3kh7_A 24 PSELPSALIGKPFPAFDLPSVQDPARRLTEA-DL---------KGKPALVNVWGTWCPSCRVEHPELTRLAEQ---GVVI 90 (176)
T ss_dssp GGGSTTTTTTSBCCCCEEEBSSCTTSEEEGG-GG---------CSSCEEEEEECTTCHHHHHHHHHHHHHHHT---TCEE
T ss_pred cccccccccCCcCCCcEecccCCCCceecHH-Hh---------CCCEEEEEEECCcCHHHHHHHHHHHHHHHC---CCEE
Confidence 34455677788888887765432 1223212 22 589999999999999999999999999886 4899
Q ss_pred EEEECCC-----------------------CHHHHHHhCCccce
Q 031608 133 YYVDVNK-----------------------VSKDLVKRGNISVS 153 (156)
Q Consensus 133 ~~vd~d~-----------------------~~~l~~~~~i~sv~ 153 (156)
+.|++++ +.++++.|++.++|
T Consensus 91 v~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P 134 (176)
T 3kh7_A 91 YGINYKDDNAAAIKWLNELHNPYLLSISDADGTLGLDLGVYGAP 134 (176)
T ss_dssp EEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHHHHHHTCCSSC
T ss_pred EEEeCCCCHHHHHHHHHHcCCCCceEEECCcchHHHHcCCCCCC
Confidence 9998643 44566777777766
No 143
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.34 E-value=2.9e-12 Score=88.67 Aligned_cols=59 Identities=20% Similarity=0.304 Sum_probs=52.3
Q ss_pred CCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCC-----------------------CHHHHHHhCCccc
Q 031608 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNK-----------------------VSKDLVKRGNISV 152 (156)
Q Consensus 96 ~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~-----------------------~~~l~~~~~i~sv 152 (156)
.|++++|.||++||++|+.+.|.+++++++++ ++.++.|++++ +.+++++|++.++
T Consensus 24 ~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~ 102 (136)
T 1zzo_A 24 LGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP-EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQ 102 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTCHHHHHTTCCSS
T ss_pred CCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC-CeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCCcHHHHHcCCCCC
Confidence 58999999999999999999999999999998 79999999854 5678888888888
Q ss_pred eec
Q 031608 153 SIQ 155 (156)
Q Consensus 153 ~~~ 155 (156)
|..
T Consensus 103 P~~ 105 (136)
T 1zzo_A 103 PAY 105 (136)
T ss_dssp SEE
T ss_pred ceE
Confidence 753
No 144
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.34 E-value=2.8e-12 Score=91.30 Aligned_cols=59 Identities=19% Similarity=0.398 Sum_probs=52.4
Q ss_pred CCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcC-CeEEEEEECCCC-----------------------HHHHHHhCCcc
Q 031608 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVNKV-----------------------SKDLVKRGNIS 151 (156)
Q Consensus 96 ~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~-~v~~~~vd~d~~-----------------------~~l~~~~~i~s 151 (156)
.|+++||.||++||++|+.+.|.+.++++++++ ++.++.|+++.. ..+++.|++.+
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 106 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYGTTG 106 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHHTCCS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHhCCCC
Confidence 589999999999999999999999999999986 699999999875 33778899988
Q ss_pred cee
Q 031608 152 VSI 154 (156)
Q Consensus 152 v~~ 154 (156)
+|.
T Consensus 107 ~P~ 109 (154)
T 3kcm_A 107 VPE 109 (154)
T ss_dssp BCE
T ss_pred CCe
Confidence 873
No 145
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.33 E-value=1.9e-12 Score=92.32 Aligned_cols=82 Identities=21% Similarity=0.365 Sum_probs=63.6
Q ss_pred cchhccccCCCCCCCccceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEEC-
Q 031608 59 DVRVEALWPDLSRPTSVELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDV- 137 (156)
Q Consensus 59 ~~~~~~~~~~~~~p~~~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~- 137 (156)
.+..+..+|++.++... ...+... ++ . +++||+||++||++|+.+.|.+.++++++ ++.++.|++
T Consensus 4 ~l~~g~~~p~f~l~~~~-g~~~~l~-~~---------~-k~vll~f~~~~C~~C~~~~~~l~~l~~~~--~v~~v~v~~d 69 (154)
T 3ia1_A 4 AVKPGEPLPDFLLLDPK-GQPVTPA-TV---------S-KPAVIVFWASWCTVCKAEFPGLHRVAEET--GVPFYVISRE 69 (154)
T ss_dssp CCCSBEECCCCCEECTT-SCEECTT-TS---------C-SSEEEEEECTTCHHHHHHHHHHHHHHHHH--CCCEEEEECC
T ss_pred cCCCCCcCCceEEECCC-CCEechH-Hc---------C-CeEEEEEEcccChhHHHHHHHHHHHHHHc--CCeEEEEeCC
Confidence 35567777777776542 2334322 23 4 99999999999999999999999999999 589999999
Q ss_pred --------------------------CCCHHHHHHhCCcccee
Q 031608 138 --------------------------NKVSKDLVKRGNISVSI 154 (156)
Q Consensus 138 --------------------------d~~~~l~~~~~i~sv~~ 154 (156)
+...++++.|++.++|.
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~ 112 (154)
T 3ia1_A 70 PRDTREVVLEYMKTYPRFIPLLASDRDRPHEVAARFKVLGQPW 112 (154)
T ss_dssp TTCCHHHHHHHHTTCTTEEECBCCSSCCHHHHHTTSSBCSSCE
T ss_pred CcccHHHHHHHHHHcCCCcccccccccchHHHHHHhCCCcccE
Confidence 35677788888888775
No 146
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.33 E-value=2.4e-12 Score=95.22 Aligned_cols=84 Identities=14% Similarity=0.120 Sum_probs=62.5
Q ss_pred chhccccCCCCCCCccceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECC-
Q 031608 60 VRVEALWPDLSRPTSVELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVN- 138 (156)
Q Consensus 60 ~~~~~~~~~~~~p~~~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d- 138 (156)
+.++...|++.+.+.. ...+... ++ .|+++||+|||+||++|+.+.|.++++++++.+++.++.|+++
T Consensus 7 ~~~g~~~p~f~l~~~~-G~~~~l~-~~---------~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~v~v~~d~ 75 (188)
T 2cvb_A 7 LPLESPLIDAELPDPR-GGRYRLS-QF---------HEPLLAVVFMCNHCPYVKGSIGELVALAERYRGKVAFVGINAND 75 (188)
T ss_dssp CCTTCBCCCCEEECTT-SCEEEGG-GC---------CSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTTEEEEEEECCC
T ss_pred CCCCCCCCCceeecCC-CCEEeHH-Hh---------CCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcCeEEEEEEcCc
Confidence 3445566666655432 2223212 22 5899999999999999999999999999999866999999983
Q ss_pred ----------------------------CCHHHHHHhCCcccee
Q 031608 139 ----------------------------KVSKDLVKRGNISVSI 154 (156)
Q Consensus 139 ----------------------------~~~~l~~~~~i~sv~~ 154 (156)
.+.++++.|++.++|.
T Consensus 76 ~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~ 119 (188)
T 2cvb_A 76 YEKYPEDAPEKMAAFAEEHGIFFPYLLDETQEVAKAYRALRTPE 119 (188)
T ss_dssp TTTCGGGSHHHHHHHHHHHTCCSCEEECSSSHHHHHTTCCEESE
T ss_pred cccccccCHHHHHHHHHHhCCCceEEECCcchHHHHcCCCCCCe
Confidence 3557788888887774
No 147
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.33 E-value=1.7e-12 Score=109.92 Aligned_cols=74 Identities=16% Similarity=0.286 Sum_probs=61.5
Q ss_pred ceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhc-C--CeEEEEEECCCCHHHHHHhCCccc
Q 031608 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFD-T--KLKFYYVDVNKVSKDLVKRGNISV 152 (156)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~-~--~v~~~~vd~d~~~~l~~~~~i~sv 152 (156)
.+..++ .++|++.+. ..++++||+|||+||++|+.+.|.++++++.+. + ++.++++|++.+... . |+|.++
T Consensus 359 ~v~~l~-~~~f~~~v~---~~~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~-~-~~v~~~ 432 (504)
T 2b5e_A 359 SVFQLV-GKNHDEIVN---DPKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTENDVR-G-VVIEGY 432 (504)
T ss_dssp SEEEEC-TTTHHHHHH---CTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGGGCCCS-S-CCCSSS
T ss_pred cceecc-cccHHHhhc---cCCCCEEEEEECCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecCCccccc-c-CCceec
Confidence 355565 558888875 568999999999999999999999999999886 2 699999999877644 3 999998
Q ss_pred eec
Q 031608 153 SIQ 155 (156)
Q Consensus 153 ~~~ 155 (156)
|+.
T Consensus 433 Pt~ 435 (504)
T 2b5e_A 433 PTI 435 (504)
T ss_dssp SEE
T ss_pred CeE
Confidence 864
No 148
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.31 E-value=2.9e-12 Score=91.24 Aligned_cols=85 Identities=16% Similarity=0.300 Sum_probs=59.5
Q ss_pred ccchhccccCCCCCCCccce-------EecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCe
Q 031608 58 RDVRVEALWPDLSRPTSVEL-------EPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKL 130 (156)
Q Consensus 58 r~~~~~~~~~~~~~p~~~~~-------~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v 130 (156)
....++...|++..++..+. ..+... ++ .|++++|+||++||++|+.+.|.+++++++ +++
T Consensus 6 ~~~~~g~~~p~f~l~~~~g~~~~~~~~~~~~l~-~~---------~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~--~~v 73 (156)
T 1kng_A 6 PSALIGRPAPQTALPPLEGLQADNVQVPGLDPA-AF---------KGKVSLVNVWASWCVPCHDEAPLLTELGKD--KRF 73 (156)
T ss_dssp ------CBCCCCCBCCCTTCEETTEECCCBCGG-GG---------TTSCEEEEEECTTCHHHHHHHHHHHHHTTC--TTS
T ss_pred hhHHhCCCCCCceeeeccCcccccccCceechH-Hh---------CCCEEEEEEEcccCHhHHHHHHHHHHHHhc--CCe
Confidence 34556777788877665321 333322 22 589999999999999999999999999876 458
Q ss_pred EEEEEECCC-----------------------CHHHHHHhCCcccee
Q 031608 131 KFYYVDVNK-----------------------VSKDLVKRGNISVSI 154 (156)
Q Consensus 131 ~~~~vd~d~-----------------------~~~l~~~~~i~sv~~ 154 (156)
.++.|++++ ..++++.|++.++|.
T Consensus 74 ~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~ 120 (156)
T 1kng_A 74 QLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWGVYGVPE 120 (156)
T ss_dssp EEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTTCCSSCE
T ss_pred EEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcCcCccCe
Confidence 999988754 446778888888873
No 149
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.31 E-value=3.2e-12 Score=94.12 Aligned_cols=52 Identities=13% Similarity=0.257 Sum_probs=45.9
Q ss_pred CCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCC-e------EEEEEECCC-CHHHHHHh
Q 031608 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTK-L------KFYYVDVNK-VSKDLVKR 147 (156)
Q Consensus 96 ~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~-v------~~~~vd~d~-~~~l~~~~ 147 (156)
.||++||+||++||++|+.+.|.|.+++++|++. + .|+.|++++ .++.+++|
T Consensus 58 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~ 117 (183)
T 3lwa_A 58 ENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRDIAQDF 117 (183)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHHHHHHH
T ss_pred CCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHHHHHHH
Confidence 5899999999999999999999999999998753 8 999999998 77777766
No 150
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.31 E-value=5.3e-12 Score=96.35 Aligned_cols=86 Identities=13% Similarity=0.245 Sum_probs=66.8
Q ss_pred ccchhccccCCCCCCCccceEecCChhhHHHHHHHhhcCCCc-EEEEEeCCCChhHHhhhHHHHHHHHHhcC-CeEEEEE
Q 031608 58 RDVRVEALWPDLSRPTSVELEPINDSDHLDQILLRAQELSQP-ILIDWMASWCRKCIYLKPKLEKLAAEFDT-KLKFYYV 135 (156)
Q Consensus 58 r~~~~~~~~~~~~~p~~~~~~~i~~~~~~~~~l~~a~~~~k~-vlV~F~A~WC~~Ck~~~p~l~~la~~~~~-~v~~~~v 135 (156)
..+.++..+|+|.++.. ....+... ++ .|++ +||+|||+||++|+.+.|.|++++++|.+ ++.|+.|
T Consensus 30 ~~l~~G~~aP~f~l~~~-~G~~v~l~-~~---------~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~V 98 (218)
T 3u5r_E 30 NSITLGTRAADFVLPDA-GGNLFTLA-EF---------KDSPALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAI 98 (218)
T ss_dssp CCCCTTCBCCCCCEECT-TCCEECGG-GG---------TTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEE
T ss_pred CcCCCCCcCCCcEeECC-CCCEEeHH-Hh---------CCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEE
Confidence 34667788888887764 33344322 33 4785 99999999999999999999999999976 4999999
Q ss_pred ECC-----------------------------CCHHHHHHhCCcccee
Q 031608 136 DVN-----------------------------KVSKDLVKRGNISVSI 154 (156)
Q Consensus 136 d~d-----------------------------~~~~l~~~~~i~sv~~ 154 (156)
+++ ...++++.|++..+|.
T Consensus 99 s~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~v~~~P~ 146 (218)
T 3u5r_E 99 NSNDAQAFPEETLERVGAEVKAYGYGFPYLKDASQSVAKAYGAACTPD 146 (218)
T ss_dssp ECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTTCHHHHHHTCCEESE
T ss_pred ECCcccccccCCHHHHHHHHHHhCCCccEEECCccHHHHHcCCCCCCe
Confidence 994 3567888888887765
No 151
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.31 E-value=5.2e-12 Score=91.28 Aligned_cols=67 Identities=21% Similarity=0.417 Sum_probs=52.2
Q ss_pred chhccccCCCCCCCccceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECC
Q 031608 60 VRVEALWPDLSRPTSVELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVN 138 (156)
Q Consensus 60 ~~~~~~~~~~~~p~~~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d 138 (156)
..++...|++.+... ....+... ++ .|+++||+||++||++|+.+.|.+.+++++++ ++.|+.|+++
T Consensus 11 ~~~g~~~p~~~l~~~-~g~~~~l~-~~---------~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~-~v~vv~i~~d 77 (165)
T 3ha9_A 11 EEVLEREASFSLTTI-DGEVISLN-NV---------GGDVVILWFMAAWCPSCVYMADLLDRLTEKYR-EISVIAIDFW 77 (165)
T ss_dssp HHHHHHHHCCCEEBT-TSCEECGG-GC---------CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT-TEEEEEEECC
T ss_pred ccccCcCCCCEeecC-CCCEeeHH-Hh---------CCCEEEEEEECCCCcchhhhHHHHHHHHHHcC-CcEEEEEEec
Confidence 345566677766553 22334322 22 58999999999999999999999999999998 7999999998
No 152
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.29 E-value=5.9e-12 Score=86.84 Aligned_cols=60 Identities=23% Similarity=0.355 Sum_probs=51.7
Q ss_pred CCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEEC----------------------------CCCHHHHHHh
Q 031608 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDV----------------------------NKVSKDLVKR 147 (156)
Q Consensus 96 ~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~----------------------------d~~~~l~~~~ 147 (156)
.|+++||+||++||++|+.+.|.++++++++++++.++.++. +.+.++++.|
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 100 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLPDTDEIAKEAGDDYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLLETY 100 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTTTEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTTCHHHHHT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCCCcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcchHHHHHc
Confidence 589999999999999999999999999999877899999953 3355788888
Q ss_pred CCccceec
Q 031608 148 GNISVSIQ 155 (156)
Q Consensus 148 ~i~sv~~~ 155 (156)
++.++|..
T Consensus 101 ~v~~~P~~ 108 (138)
T 4evm_A 101 GVRSYPTQ 108 (138)
T ss_dssp TCCSSSEE
T ss_pred CcccCCeE
Confidence 98887753
No 153
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=99.29 E-value=4.6e-12 Score=87.68 Aligned_cols=55 Identities=11% Similarity=0.108 Sum_probs=50.0
Q ss_pred CcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 98 QPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 98 k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
.+.|+.||++||++|+.++|.|++++++++ +.+..+|++++++++.+||+. +|+-
T Consensus 29 m~~vv~y~~~~C~~C~~a~~~L~~l~~e~~--i~~~~vDId~d~~l~~~ygv~-VP~l 83 (107)
T 2fgx_A 29 PRKLVVYGREGCHLCEEMIASLRVLQKKSW--FELEVINIDGNEHLTRLYNDR-VPVL 83 (107)
T ss_dssp CCCEEEEECSSCHHHHHHHHHHHHHHHHSC--CCCEEEETTTCHHHHHHSTTS-CSEE
T ss_pred ccEEEEEeCCCChhHHHHHHHHHHHHHhcC--CeEEEEECCCCHHHHHHhCCC-CceE
Confidence 367999999999999999999999998875 899999999999999999986 8863
No 154
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.28 E-value=4.7e-12 Score=96.46 Aligned_cols=72 Identities=17% Similarity=0.184 Sum_probs=59.4
Q ss_pred ChhhHHHHHHHhhcCCCcEEEEEe-----CCCChhHHhhhHHHHHHHHHh--cCCeEEEEEECCCCHHHHHHhCCcccee
Q 031608 82 DSDHLDQILLRAQELSQPILIDWM-----ASWCRKCIYLKPKLEKLAAEF--DTKLKFYYVDVNKVSKDLVKRGNISVSI 154 (156)
Q Consensus 82 ~~~~~~~~l~~a~~~~k~vlV~F~-----A~WC~~Ck~~~p~l~~la~~~--~~~v~~~~vd~d~~~~l~~~~~i~sv~~ 154 (156)
+.+++++++.. ...++++|.|| ++||++|+.+.|.++++++++ .+++.+++||++++++++++|||.++|+
T Consensus 7 ~~~~l~~~~~~--~~~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt 84 (229)
T 2ywm_A 7 VRMQLKELAQK--EFKEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFTHKEETEKYGVDRVPT 84 (229)
T ss_dssp HHHHHHHHHHH--HCCSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTTCHHHHHHTTCCBSSE
T ss_pred HHHHHHHHHHH--hccCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCcccHHHHHHcCCCcCcE
Confidence 34577777721 24566666666 999999999999999998888 5679999999999999999999999986
Q ss_pred c
Q 031608 155 Q 155 (156)
Q Consensus 155 ~ 155 (156)
.
T Consensus 85 l 85 (229)
T 2ywm_A 85 I 85 (229)
T ss_dssp E
T ss_pred E
Confidence 3
No 155
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=99.28 E-value=3e-12 Score=85.25 Aligned_cols=49 Identities=18% Similarity=0.149 Sum_probs=43.3
Q ss_pred EEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 101 LIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 101 lV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
++.|||+||++|+.++|.|++++.++ +.+||++++++++.+||+. +|+-
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~-----~~~vdid~~~~l~~~~g~~-vPtl 51 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA-----FFSVFIDDDAALESAYGLR-VPVL 51 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC-----EEEEECTTCHHHHHHHTTT-CSEE
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh-----eEEEECCCCHHHHHHhCCC-cCeE
Confidence 78899999999999999999876542 6889999999999999997 8863
No 156
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=99.27 E-value=3.9e-12 Score=94.62 Aligned_cols=71 Identities=17% Similarity=0.149 Sum_probs=54.1
Q ss_pred cccchhccccCCCCCCCccceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcC-CeEEEEE
Q 031608 57 RRDVRVEALWPDLSRPTSVELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDT-KLKFYYV 135 (156)
Q Consensus 57 ~r~~~~~~~~~~~~~p~~~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~-~v~~~~v 135 (156)
++.......+|+|.+++. ....+... ++ .||++||+|||+||++|+.+.|.|.+++++|++ ++.++.|
T Consensus 17 ~~~~~~~~~~p~f~l~d~-~G~~~~l~-~~---------~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~i 85 (187)
T 3dwv_A 17 RKKMSAASSIFDFEVLDA-DHKPYNLV-QH---------KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAF 85 (187)
T ss_dssp ---CTTCCSGGGSCCBBT-TSCBCCGG-GG---------TTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEE
T ss_pred hhhhcCCCccCCeEEEcC-CCCEeeHH-Hh---------CCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEE
Confidence 344555667788887764 33344322 33 589999999999999999999999999999976 4999999
Q ss_pred ECC
Q 031608 136 DVN 138 (156)
Q Consensus 136 d~d 138 (156)
++|
T Consensus 86 s~d 88 (187)
T 3dwv_A 86 PSN 88 (187)
T ss_dssp EBC
T ss_pred ECc
Confidence 987
No 157
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=99.27 E-value=6.3e-12 Score=92.78 Aligned_cols=69 Identities=13% Similarity=0.032 Sum_probs=51.8
Q ss_pred chhccccCCCCCCCccceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcC-CeEEEEEECC
Q 031608 60 VRVEALWPDLSRPTSVELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVN 138 (156)
Q Consensus 60 ~~~~~~~~~~~~p~~~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~-~v~~~~vd~d 138 (156)
-..+..+|+|.++... ...+... ++ .||++||+|||+||++|+.+.|.|.+++++|++ ++.++.|+++
T Consensus 12 ~~~~~~~p~f~l~d~~-G~~v~l~-~~---------~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d 80 (180)
T 3kij_A 12 KPKINSFYAFEVKDAK-GRTVSLE-KY---------KGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCN 80 (180)
T ss_dssp CCCCCCGGGCEEEBTT-SCEEEGG-GG---------TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECC
T ss_pred cCCcCcccceEEecCC-CCEecHH-Hc---------CCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECC
Confidence 3445556666665532 2333322 23 589999999999999999999999999999986 4999999876
Q ss_pred C
Q 031608 139 K 139 (156)
Q Consensus 139 ~ 139 (156)
.
T Consensus 81 ~ 81 (180)
T 3kij_A 81 Q 81 (180)
T ss_dssp C
T ss_pred c
Confidence 4
No 158
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.26 E-value=5.9e-12 Score=90.48 Aligned_cols=61 Identities=20% Similarity=0.256 Sum_probs=48.7
Q ss_pred cCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhc-CCeEEEEEEC----------------------------CCCHHHHH
Q 031608 95 ELSQPILIDWMASWCRKCIYLKPKLEKLAAEFD-TKLKFYYVDV----------------------------NKVSKDLV 145 (156)
Q Consensus 95 ~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~-~~v~~~~vd~----------------------------d~~~~l~~ 145 (156)
..|+++||+|||+||++|+.+.|.|++++++|. .++.++.|++ +.+.++++
T Consensus 36 ~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 115 (164)
T 2h30_A 36 KKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWYAGLNYPKLPVVTDNGGTIAQ 115 (164)
T ss_dssp CTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTTSCCTTSCEEECTTCHHHH
T ss_pred hCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHHHHhCCCCcceEEEcCchHHHH
Confidence 368999999999999999999999999998874 2477776664 33567778
Q ss_pred HhCCccceec
Q 031608 146 KRGNISVSIQ 155 (156)
Q Consensus 146 ~~~i~sv~~~ 155 (156)
+|+|.++|+.
T Consensus 116 ~~~v~~~P~~ 125 (164)
T 2h30_A 116 NLNISVYPSW 125 (164)
T ss_dssp HTTCCSSSEE
T ss_pred HcCCCccceE
Confidence 8888777753
No 159
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.25 E-value=2.2e-11 Score=89.71 Aligned_cols=55 Identities=16% Similarity=0.414 Sum_probs=48.3
Q ss_pred CCCcEEEEEeCCCChhHHhhhHHHHHHHHHhc-CCeEEEEEECCCC-----HHHHHHhCCc
Q 031608 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFD-TKLKFYYVDVNKV-----SKDLVKRGNI 150 (156)
Q Consensus 96 ~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~-~~v~~~~vd~d~~-----~~l~~~~~i~ 150 (156)
.||++||+||++||++|+.+.|.+++++++++ .++.++.|+++.. .+.++++++.
T Consensus 59 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~ 119 (186)
T 1jfu_A 59 RGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPKTFLKEANLT 119 (186)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHHHHTTCC
T ss_pred CCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHHHHcCCC
Confidence 58999999999999999999999999999997 4699999999865 4667777774
No 160
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.25 E-value=7.7e-12 Score=92.75 Aligned_cols=59 Identities=14% Similarity=0.201 Sum_probs=50.6
Q ss_pred CCC-cEEEEEeCCCChhHHhhhHHHHHHHHHhcC-CeEEEEEECC-----------------------------CCHHHH
Q 031608 96 LSQ-PILIDWMASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVN-----------------------------KVSKDL 144 (156)
Q Consensus 96 ~~k-~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~-~v~~~~vd~d-----------------------------~~~~l~ 144 (156)
.|+ ++||+|||+||++|+.+.|.+.++++++.+ ++.++.|++| .+.+++
T Consensus 44 ~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~ 123 (196)
T 2ywi_A 44 KSDAATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDETQEVA 123 (196)
T ss_dssp CCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSCHHH
T ss_pred CCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCchHHH
Confidence 477 499999999999999999999999999975 4999999984 355778
Q ss_pred HHhCCcccee
Q 031608 145 VKRGNISVSI 154 (156)
Q Consensus 145 ~~~~i~sv~~ 154 (156)
+.|++.++|.
T Consensus 124 ~~~~v~~~P~ 133 (196)
T 2ywi_A 124 KAYDAACTPD 133 (196)
T ss_dssp HHHTCCEESE
T ss_pred HHhCCCCCCe
Confidence 8888887764
No 161
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=98.89 E-value=6.3e-13 Score=93.46 Aligned_cols=60 Identities=18% Similarity=0.355 Sum_probs=50.6
Q ss_pred CCC-cEEEEEeCCCChhHHhhhHHHHHHHHHhc---CCeEEEEEECCCCH-------------------------HHHHH
Q 031608 96 LSQ-PILIDWMASWCRKCIYLKPKLEKLAAEFD---TKLKFYYVDVNKVS-------------------------KDLVK 146 (156)
Q Consensus 96 ~~k-~vlV~F~A~WC~~Ck~~~p~l~~la~~~~---~~v~~~~vd~d~~~-------------------------~l~~~ 146 (156)
.|+ +++|+|||+||++|+.+.|.++++++++. .++.++.|++++.+ +++++
T Consensus 24 ~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (143)
T 2lus_A 24 KDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASNVTAK 103 (143)
Confidence 377 99999999999999999999999999883 36889999887653 67888
Q ss_pred hCCccceec
Q 031608 147 RGNISVSIQ 155 (156)
Q Consensus 147 ~~i~sv~~~ 155 (156)
|+|.++|..
T Consensus 104 ~~v~~~P~~ 112 (143)
T 2lus_A 104 YGITGIPAL 112 (143)
Confidence 888887753
No 162
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=99.24 E-value=8.5e-12 Score=92.23 Aligned_cols=71 Identities=13% Similarity=0.070 Sum_probs=50.8
Q ss_pred ccchhccccCCCCCCCccceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcC-CeEEEEEE
Q 031608 58 RDVRVEALWPDLSRPTSVELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVD 136 (156)
Q Consensus 58 r~~~~~~~~~~~~~p~~~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~-~v~~~~vd 136 (156)
..+.++...|++.++... ...+... ++ .|+++||+|||+||++|+.+.|.|+++++++.+ ++.++.|+
T Consensus 21 ~~~~~g~~~p~f~l~~~~-G~~~~l~-~~---------~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs 89 (181)
T 2p31_A 21 QSMQQEQDFYDFKAVNIR-GKLVSLE-KY---------RGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFP 89 (181)
T ss_dssp ------CCGGGCEEEBTT-SCEEEGG-GG---------TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred CcCCcCCccCceEeecCC-CCEecHH-Hc---------CCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEE
Confidence 345566677777666532 2333222 23 589999999999999999999999999999975 49999999
Q ss_pred CCC
Q 031608 137 VNK 139 (156)
Q Consensus 137 ~d~ 139 (156)
+|+
T Consensus 90 ~d~ 92 (181)
T 2p31_A 90 CNQ 92 (181)
T ss_dssp CCC
T ss_pred CcC
Confidence 873
No 163
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=99.24 E-value=9.5e-12 Score=89.81 Aligned_cols=69 Identities=10% Similarity=-0.015 Sum_probs=51.1
Q ss_pred chhccccCCCCCCCccceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcC-CeEEEEEECC
Q 031608 60 VRVEALWPDLSRPTSVELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVN 138 (156)
Q Consensus 60 ~~~~~~~~~~~~p~~~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~-~v~~~~vd~d 138 (156)
...+...|++.++... ...+... ++ .|+++||+|||+||++|+.+.|.+.++++++.+ ++.++.|++|
T Consensus 5 ~~~g~~~p~f~l~~~~-G~~~~l~-~~---------~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d 73 (169)
T 2v1m_A 5 HKSWNSIYEFTVKDIN-GVDVSLE-KY---------RGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCN 73 (169)
T ss_dssp --CCCSGGGCEEEBTT-SCEEEGG-GG---------TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred ccCCcccccceeecCC-CCCccHH-Hc---------CCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEECC
Confidence 4455666666665432 2233222 22 589999999999999999999999999999975 5999999986
Q ss_pred C
Q 031608 139 K 139 (156)
Q Consensus 139 ~ 139 (156)
+
T Consensus 74 ~ 74 (169)
T 2v1m_A 74 Q 74 (169)
T ss_dssp C
T ss_pred c
Confidence 3
No 164
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=99.23 E-value=4e-12 Score=82.32 Aligned_cols=55 Identities=11% Similarity=0.111 Sum_probs=45.0
Q ss_pred EEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECC-CCHHHHHHhCCccceec
Q 031608 101 LIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVN-KVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 101 lV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d-~~~~l~~~~~i~sv~~~ 155 (156)
++.||++||++|+.+.|.+++++++++..+.++.||.+ +.+++++++|+.++|+-
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~gv~~vPt~ 59 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAIDPSKYTVEIVHLGTDKARIAEAEKAGVKSVPAL 59 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHSCTTTEEEEEEETTTCSSTHHHHHHHTCCEEEEE
T ss_pred eEEEeCCCCCchHHHHHHHHHHHHhcCCeEEEEEecCChhhHHHHHHcCCCcCCEE
Confidence 67799999999999999999998776534555555554 57899999999999874
No 165
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=99.22 E-value=3.2e-11 Score=94.23 Aligned_cols=71 Identities=13% Similarity=0.110 Sum_probs=60.5
Q ss_pred ceEecCChhhHHHHHHHhhcCCCcEEEEEeC--CCChhHHhhhHHHHHHHHHhc--CCeEEEEEECC-----CCHHHHHH
Q 031608 76 ELEPINDSDHLDQILLRAQELSQPILIDWMA--SWCRKCIYLKPKLEKLAAEFD--TKLKFYYVDVN-----KVSKDLVK 146 (156)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A--~WC~~Ck~~~p~l~~la~~~~--~~v~~~~vd~d-----~~~~l~~~ 146 (156)
.+..++ .++|++++ ..++++||+||| |||+ +.|.|+++++.+. +++.|++||++ ++++++++
T Consensus 6 ~v~~Lt-~~nF~~~i----~~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~ 76 (240)
T 2qc7_A 6 GALPLD-TVTFYKVI----PKSKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEK 76 (240)
T ss_dssp TCEECC-TTHHHHHG----GGCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHH
T ss_pred CceECC-HHHHHHHH----cCCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHH
Confidence 345555 56899988 458899999999 9999 9999999999985 36999999955 48999999
Q ss_pred hCCc--cceec
Q 031608 147 RGNI--SVSIQ 155 (156)
Q Consensus 147 ~~i~--sv~~~ 155 (156)
|+|. ++|+.
T Consensus 77 ~~V~~~~~PTl 87 (240)
T 2qc7_A 77 YKLDKESYPVF 87 (240)
T ss_dssp TTCCGGGCSEE
T ss_pred cCCCCCCCCEE
Confidence 9999 99874
No 166
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.21 E-value=1.6e-11 Score=88.87 Aligned_cols=80 Identities=11% Similarity=-0.019 Sum_probs=59.5
Q ss_pred hhccccCCCCCCCccceEecCChhhHHHHHHHhhcCCCc-EEEEEe-CCCChhHHhhhHHHHHHHHHhcC-CeEEEEEEC
Q 031608 61 RVEALWPDLSRPTSVELEPINDSDHLDQILLRAQELSQP-ILIDWM-ASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDV 137 (156)
Q Consensus 61 ~~~~~~~~~~~p~~~~~~~i~~~~~~~~~l~~a~~~~k~-vlV~F~-A~WC~~Ck~~~p~l~~la~~~~~-~v~~~~vd~ 137 (156)
.++..+|++.++.. ....+... ++ .|++ +||+|| |+||++|+.+.|.|.++++++++ ++.++.|+.
T Consensus 3 ~~G~~~P~f~l~~~-~G~~~~l~-~~---------~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~ 71 (161)
T 3drn_A 3 KVGDKAPLFEGIAD-NGEKISLS-DY---------IGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSS 71 (161)
T ss_dssp CTTSBCCCCEEEET-TSCEEEGG-GT---------TTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEES
T ss_pred CCCCcCCCeEeecC-CCCEEEHH-Hh---------cCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeC
Confidence 45666777766653 22333222 23 4787 999999 99999999999999999999975 599999999
Q ss_pred C---------------------CCHHHHHHhCCcc
Q 031608 138 N---------------------KVSKDLVKRGNIS 151 (156)
Q Consensus 138 d---------------------~~~~l~~~~~i~s 151 (156)
| ...++++.||+..
T Consensus 72 d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 106 (161)
T 3drn_A 72 DDINSHKRFKEKYKLPFILVSDPDKKIRELYGAKG 106 (161)
T ss_dssp CCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCCC
T ss_pred CCHHHHHHHHHHhCCCceEEECCcHHHHHHcCCCC
Confidence 8 3456677777765
No 167
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=99.21 E-value=1.5e-11 Score=84.23 Aligned_cols=53 Identities=23% Similarity=0.300 Sum_probs=42.8
Q ss_pred CCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCC-----HHHHHHhCCcccee
Q 031608 97 SQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKV-----SKDLVKRGNISVSI 154 (156)
Q Consensus 97 ~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~-----~~l~~~~~i~sv~~ 154 (156)
++++++ ||++||++|+.+.|.|+++..+ +.++.||.+.. .++++++|+.++|+
T Consensus 19 ~~~vv~-f~a~~C~~C~~~~~~l~~~~~~----~~~v~v~~~~~~~~~~~~l~~~~~v~~~Pt 76 (116)
T 2e7p_A 19 SAPVVV-FSKTYCGYCNRVKQLLTQVGAS----YKVVELDELSDGSQLQSALAHWTGRGTVPN 76 (116)
T ss_dssp SSSEEE-EECTTCHHHHHHHHHHHHHTCC----CEEEEGGGSTTHHHHHHHHHHHHSCCSSCE
T ss_pred CCCEEE-EECCCChhHHHHHHHHHHcCCC----eEEEEccCCCChHHHHHHHHHHhCCCCcCE
Confidence 566666 9999999999999999988543 56666666665 57899999999986
No 168
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=99.21 E-value=1.6e-11 Score=93.37 Aligned_cols=43 Identities=16% Similarity=0.141 Sum_probs=40.1
Q ss_pred CCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcC-CeEEEEEECC
Q 031608 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVN 138 (156)
Q Consensus 96 ~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~-~v~~~~vd~d 138 (156)
.|+++||+|||+||++|+.+.|.|++++++|.+ ++.++.|+++
T Consensus 46 ~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d 89 (208)
T 2f8a_A 46 RGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCN 89 (208)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEECC
Confidence 589999999999999999999999999999975 4999999986
No 169
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=99.20 E-value=2e-11 Score=88.14 Aligned_cols=43 Identities=19% Similarity=0.197 Sum_probs=40.2
Q ss_pred CCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcC-CeEEEEEECC
Q 031608 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVN 138 (156)
Q Consensus 96 ~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~-~v~~~~vd~d 138 (156)
.||++||+|||+||++|+.+.|.+.++++++.+ ++.++.|++|
T Consensus 31 ~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d 74 (170)
T 2p5q_A 31 KGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCN 74 (170)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECC
Confidence 589999999999999999999999999999976 4999999986
No 170
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=99.19 E-value=3.6e-11 Score=89.49 Aligned_cols=68 Identities=16% Similarity=0.094 Sum_probs=51.6
Q ss_pred chhccccCCCCCCCccceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcC-CeEEEEEECC
Q 031608 60 VRVEALWPDLSRPTSVELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVN 138 (156)
Q Consensus 60 ~~~~~~~~~~~~p~~~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~-~v~~~~vd~d 138 (156)
+..+..+|++.+++.. ...+... ++ .|+++||+|||+||++|+.+.|.|.++++++.+ ++.++.|++|
T Consensus 22 ~~~~~~~p~f~l~~~~-G~~~~l~-~~---------~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d 90 (190)
T 2vup_A 22 MSAASSIFDFEVLDAD-HKPYNLV-QH---------KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCN 90 (190)
T ss_dssp --CCCSGGGSCCBBTT-SSBCCGG-GG---------TTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECC
T ss_pred CCCCCcccCeEEEcCC-CCEEEHH-Hc---------CCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcC
Confidence 4445566777776542 2333322 33 589999999999999999999999999999975 4999999987
No 171
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.19 E-value=3.9e-11 Score=98.49 Aligned_cols=59 Identities=17% Similarity=0.164 Sum_probs=51.3
Q ss_pred CCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcC-CeEEEEEECCC---------------------------CHHHHHHh
Q 031608 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVNK---------------------------VSKDLVKR 147 (156)
Q Consensus 96 ~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~-~v~~~~vd~d~---------------------------~~~l~~~~ 147 (156)
.||++||+|||+||++|+.+.|.|++++++|++ ++.++.|++++ +.+++++|
T Consensus 81 ~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~y 160 (352)
T 2hyx_A 81 RGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWTNY 160 (352)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHHHT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHHHHc
Confidence 589999999999999999999999999999976 59999998753 35678888
Q ss_pred CCcccee
Q 031608 148 GNISVSI 154 (156)
Q Consensus 148 ~i~sv~~ 154 (156)
+|..+|.
T Consensus 161 gV~~~Pt 167 (352)
T 2hyx_A 161 RNRYWPA 167 (352)
T ss_dssp TCCEESE
T ss_pred CCCccCE
Confidence 8887775
No 172
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.19 E-value=3.6e-12 Score=89.39 Aligned_cols=61 Identities=7% Similarity=-0.008 Sum_probs=45.1
Q ss_pred CCCcEEEEEeCCCChhHHhhhHHHHHHHHHh--cCCeEEEEEECCCC--HHHHHHhCCccceecC
Q 031608 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEF--DTKLKFYYVDVNKV--SKDLVKRGNISVSIQI 156 (156)
Q Consensus 96 ~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~--~~~v~~~~vd~d~~--~~l~~~~~i~sv~~~~ 156 (156)
+...+||+|||+||++|+.+.|.+....+.. ...+.++.||++++ ++++.+++|.++|+.|
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~~~~~~l~~vdv~~~~~~~la~~~~V~g~PT~i 81 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAEIAPQYPLTDEGRAAPVQRLQMRDPLPPGLELARPVTFTPTFV 81 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHHTTTTGGGSHHHHHSCEEEEETTSCCCTTCBCSSCCCSSSEEE
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHhhHHHhhhcccceEEEEECCCCCchhHHHHCCCCCCCEEE
Confidence 4678999999999999999987654332211 00267899999875 5889999999998764
No 173
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.19 E-value=3.5e-11 Score=85.48 Aligned_cols=60 Identities=17% Similarity=0.226 Sum_probs=51.3
Q ss_pred CCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcC-CeEEEEEEC-----------------------CCCHHHHHHhCCcc
Q 031608 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDV-----------------------NKVSKDLVKRGNIS 151 (156)
Q Consensus 96 ~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~-~v~~~~vd~-----------------------d~~~~l~~~~~i~s 151 (156)
.|+++||.||++||++|+.+.|.+.++++++++ ++.++.|+. +.+.++++.|++.+
T Consensus 27 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~ 106 (153)
T 2l5o_A 27 QGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQAFGTQV 106 (153)
T ss_dssp TTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCHHHHHHTCCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHHHHHHcCCCc
Confidence 589999999999999999999999999999975 488888774 34667888899888
Q ss_pred ceec
Q 031608 152 VSIQ 155 (156)
Q Consensus 152 v~~~ 155 (156)
+|..
T Consensus 107 ~P~~ 110 (153)
T 2l5o_A 107 YPTS 110 (153)
T ss_dssp SSEE
T ss_pred cCeE
Confidence 7753
No 174
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.19 E-value=2.8e-11 Score=94.15 Aligned_cols=76 Identities=16% Similarity=0.090 Sum_probs=64.5
Q ss_pred eEecCChhhHHHHHHHhhcCCCcEEEEEeCCC--ChhHHhhhHHHHHHHHHhc---CC--eEEEEEECCCCHHHHHHhCC
Q 031608 77 LEPINDSDHLDQILLRAQELSQPILIDWMASW--CRKCIYLKPKLEKLAAEFD---TK--LKFYYVDVNKVSKDLVKRGN 149 (156)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~W--C~~Ck~~~p~l~~la~~~~---~~--v~~~~vd~d~~~~l~~~~~i 149 (156)
+....+.++|++++. .-+++++|.||++| |++|+.+.|.++++++.++ ++ +.|+.+|++++++++.+|||
T Consensus 8 ~~~~~~~~ql~~~~~---~~~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~~~~~~~~~gv 84 (243)
T 2hls_A 8 DLSEDFRRELRETLA---EMVNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRESDSDKFSEFKV 84 (243)
T ss_dssp CCCHHHHHHHHHHHT---TCCSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTTTHHHHHHTTC
T ss_pred hCCHHHHHHHHHHHH---hCCCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCcCHHHHHhcCC
Confidence 344556678888885 45789999999999 9999999999999998853 22 99999999999999999999
Q ss_pred ccceec
Q 031608 150 ISVSIQ 155 (156)
Q Consensus 150 ~sv~~~ 155 (156)
.++|+.
T Consensus 85 ~~~Pt~ 90 (243)
T 2hls_A 85 ERVPTV 90 (243)
T ss_dssp CSSSEE
T ss_pred CcCCEE
Confidence 998864
No 175
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=98.81 E-value=1.9e-12 Score=93.05 Aligned_cols=53 Identities=17% Similarity=0.390 Sum_probs=44.6
Q ss_pred CCCcEEEEEeCCCChhHHhhhHHHHH-HHHHhc--CCeEEEEEECCCCHHHHHHhC
Q 031608 96 LSQPILIDWMASWCRKCIYLKPKLEK-LAAEFD--TKLKFYYVDVNKVSKDLVKRG 148 (156)
Q Consensus 96 ~~k~vlV~F~A~WC~~Ck~~~p~l~~-la~~~~--~~v~~~~vd~d~~~~l~~~~~ 148 (156)
.|++++|+|||+||++|+.+.|.+.+ +.+++. .++.++.|++++.++.+++|.
T Consensus 32 ~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~ 87 (159)
T 2ls5_A 32 RGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLEKVLAFA 87 (159)
Confidence 48999999999999999999999998 888776 369999999987665554443
No 176
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.17 E-value=6.8e-11 Score=100.99 Aligned_cols=70 Identities=16% Similarity=0.180 Sum_probs=59.9
Q ss_pred ChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccceec
Q 031608 82 DSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 82 ~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~~~ 155 (156)
+.+.++.+.. ..++..++.|||+||++|+.+.|.+++++.+++ ++.+..+|.+++++++.+|+|.++|+-
T Consensus 105 ~~~~~~~i~~---~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~-~v~~~~vd~~~~~~~~~~~~i~svPt~ 174 (521)
T 1hyu_A 105 AQSLLEQIRD---IDGDFEFETYYSLSCHNCPDVVQALNLMAVLNP-RIKHTAIDGGTFQNEITERNVMGVPAV 174 (521)
T ss_dssp CHHHHHHHHH---CCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT-TEEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred CHHHHHHHHh---cCCCcceEEEECCCCcCcHHHHHHHHHHHhHcC-ceEEEEEechhhHHHHHHhCCCccCEE
Confidence 3445555532 356778999999999999999999999999887 699999999999999999999999974
No 177
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=99.17 E-value=3.8e-11 Score=88.65 Aligned_cols=70 Identities=19% Similarity=0.124 Sum_probs=53.2
Q ss_pred ccchhccccCCCCCCCccceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcC-CeEEEEEE
Q 031608 58 RDVRVEALWPDLSRPTSVELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVD 136 (156)
Q Consensus 58 r~~~~~~~~~~~~~p~~~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~-~v~~~~vd 136 (156)
....++..+|++.++... ...+... ++ .||++||+|||+||++|+.+.|.|.+++++|.+ ++.++.|+
T Consensus 19 ~~~~~g~~~p~f~l~~~~-G~~~~l~-~~---------~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs 87 (183)
T 2obi_A 19 DDWRCARSMHEFSAKDID-GHMVNLD-KY---------RGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFP 87 (183)
T ss_dssp CCGGGCCSGGGCEEEBTT-SCEEEGG-GG---------TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred cCCcccCcccceEEEcCC-CCEeeHH-Hc---------CCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEE
Confidence 344566677777665532 2333222 23 589999999999999999999999999999975 59999999
Q ss_pred CC
Q 031608 137 VN 138 (156)
Q Consensus 137 ~d 138 (156)
+|
T Consensus 88 ~d 89 (183)
T 2obi_A 88 CN 89 (183)
T ss_dssp CC
T ss_pred CC
Confidence 86
No 178
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=99.16 E-value=3.9e-11 Score=87.82 Aligned_cols=73 Identities=10% Similarity=0.018 Sum_probs=58.7
Q ss_pred hhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHH---HHHHHHhcCCeEEEEEECCC--CHHHHHHhCCccceec
Q 031608 83 SDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKL---EKLAAEFDTKLKFYYVDVNK--VSKDLVKRGNISVSIQ 155 (156)
Q Consensus 83 ~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l---~~la~~~~~~v~~~~vd~d~--~~~l~~~~~i~sv~~~ 155 (156)
..++++.++.|+..+|+++|+||++||..|+.|.... .++++.+..++.++++|+++ ...++++|++.+.|+.
T Consensus 28 ~~~~~~Al~~Ak~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~~fv~v~~d~~~~~~~~l~~~y~v~~~P~~ 105 (153)
T 2dlx_A 28 KGSFETAKECGQMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSEEGQRYIQFYKLGDFPYV 105 (153)
T ss_dssp CSCHHHHHHHHHHHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHHTEEEEEEESSSHHHHHHHHHHTCCSSSEE
T ss_pred ccCHHHHHHHHHHcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHcCeEEEEEecCCHhHHHHHHHcCCCCCCEE
Confidence 3478888888878899999999999999999997654 44544443469999999976 4567899999988864
No 179
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=99.16 E-value=5.2e-11 Score=88.26 Aligned_cols=70 Identities=16% Similarity=0.069 Sum_probs=53.4
Q ss_pred ccchhccccCCCCCCCccceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcC-CeEEEEEE
Q 031608 58 RDVRVEALWPDLSRPTSVELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVD 136 (156)
Q Consensus 58 r~~~~~~~~~~~~~p~~~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~-~v~~~~vd 136 (156)
....++...|++.+++.. ...+... ++ .|+++||+|||+||++|+.+.|.|.++++++.+ ++.++.|+
T Consensus 21 ~~~~~g~~~p~f~l~~~~-G~~v~l~-~~---------~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is 89 (185)
T 2gs3_A 21 QSMRCARSMHEFSAKDID-GHMVNLD-KY---------RGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFP 89 (185)
T ss_dssp GGGGGCCCGGGCEEEBTT-SCEEEGG-GG---------TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred hhccCCCCcCCceeEcCC-CCEeeHH-Hc---------CCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEE
Confidence 345566677777666532 2333322 23 589999999999999999999999999999975 59999999
Q ss_pred CC
Q 031608 137 VN 138 (156)
Q Consensus 137 ~d 138 (156)
+|
T Consensus 90 ~d 91 (185)
T 2gs3_A 90 CN 91 (185)
T ss_dssp CC
T ss_pred Cc
Confidence 86
No 180
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.16 E-value=5.8e-11 Score=85.84 Aligned_cols=66 Identities=14% Similarity=0.248 Sum_probs=50.7
Q ss_pred hccccCCCCCCCccceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChh-HHhhhHHHHHHHHHhcC----CeEEEEEE
Q 031608 62 VEALWPDLSRPTSVELEPINDSDHLDQILLRAQELSQPILIDWMASWCRK-CIYLKPKLEKLAAEFDT----KLKFYYVD 136 (156)
Q Consensus 62 ~~~~~~~~~~p~~~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~-Ck~~~p~l~~la~~~~~----~v~~~~vd 136 (156)
.+...|++.+++... .+... ++ .||++||+||++||++ |+.+.|.+.++++++.+ ++.++.|+
T Consensus 12 ~G~~~p~f~l~~~~g--~~~l~-~~---------~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is 79 (172)
T 2k6v_A 12 LNPKPVDFALEGPQG--PVRLS-QF---------QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVS 79 (172)
T ss_dssp EEEEECCCEEECSSS--EEEGG-GS---------TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEE
T ss_pred cCCCCCCeEEEcCCC--CCcHH-Hh---------CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEE
Confidence 345566776665433 34322 22 5899999999999998 99999999999998873 69999999
Q ss_pred CCC
Q 031608 137 VNK 139 (156)
Q Consensus 137 ~d~ 139 (156)
+|.
T Consensus 80 ~d~ 82 (172)
T 2k6v_A 80 VDP 82 (172)
T ss_dssp SCT
T ss_pred ECC
Confidence 874
No 181
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.15 E-value=4.4e-11 Score=85.93 Aligned_cols=69 Identities=14% Similarity=0.174 Sum_probs=51.4
Q ss_pred chhccccCCCCCCCccceEecCChhhHHHHHHHhhcCCC-cEEEEEe-CCCChhHHhhhHHHHHHHHHhcC-CeEEEEEE
Q 031608 60 VRVEALWPDLSRPTSVELEPINDSDHLDQILLRAQELSQ-PILIDWM-ASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVD 136 (156)
Q Consensus 60 ~~~~~~~~~~~~p~~~~~~~i~~~~~~~~~l~~a~~~~k-~vlV~F~-A~WC~~Ck~~~p~l~~la~~~~~-~v~~~~vd 136 (156)
+.++...|++.+.... ...+... ++ .|+ ++||+|| |+||++|+.+.|.+.++++++.+ ++.++.|+
T Consensus 9 ~~~G~~~p~f~l~~~~-G~~~~l~-~~---------~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is 77 (160)
T 1xvw_A 9 LNVGATAPDFTLRDQN-QQLVTLR-GY---------RGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAIS 77 (160)
T ss_dssp CCTTSBCCCCEEECTT-SCEEEGG-GG---------TTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEE
T ss_pred CCCCCCCCCeEeEcCC-CCEEeHH-Hh---------cCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEe
Confidence 4556666777665432 2233222 23 476 9999998 99999999999999999999964 69999999
Q ss_pred CCC
Q 031608 137 VNK 139 (156)
Q Consensus 137 ~d~ 139 (156)
+|.
T Consensus 78 ~d~ 80 (160)
T 1xvw_A 78 VGP 80 (160)
T ss_dssp SCC
T ss_pred CCC
Confidence 874
No 182
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.15 E-value=3.6e-11 Score=87.77 Aligned_cols=42 Identities=21% Similarity=0.172 Sum_probs=38.7
Q ss_pred CCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcC-CeEEEEEECC
Q 031608 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVN 138 (156)
Q Consensus 96 ~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~-~v~~~~vd~d 138 (156)
.||++||+|||+||++|+ +.|.|.++++++.+ ++.++.|++|
T Consensus 31 ~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d 73 (171)
T 3cmi_A 31 KGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCN 73 (171)
T ss_dssp TTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred CCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEECc
Confidence 589999999999999999 99999999999975 4999999875
No 183
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.10 E-value=1.8e-10 Score=83.24 Aligned_cols=44 Identities=16% Similarity=0.294 Sum_probs=39.9
Q ss_pred CCCcEEEEEeCCCChh-HHhhhHHHHHHHHHhc-----CCeEEEEEECCC
Q 031608 96 LSQPILIDWMASWCRK-CIYLKPKLEKLAAEFD-----TKLKFYYVDVNK 139 (156)
Q Consensus 96 ~~k~vlV~F~A~WC~~-Ck~~~p~l~~la~~~~-----~~v~~~~vd~d~ 139 (156)
.|+++||+||++||++ |+.+.|.++++++++. +++.++.|++|.
T Consensus 25 ~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~ 74 (171)
T 2rli_A 25 RGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDP 74 (171)
T ss_dssp TTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCS
T ss_pred CCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECC
Confidence 5899999999999998 9999999999999984 369999999873
No 184
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.10 E-value=1.1e-10 Score=83.85 Aligned_cols=44 Identities=23% Similarity=0.394 Sum_probs=40.0
Q ss_pred CCCcEEEEEeCCCChh-HHhhhHHHHHHHHHhcC-----CeEEEEEECCC
Q 031608 96 LSQPILIDWMASWCRK-CIYLKPKLEKLAAEFDT-----KLKFYYVDVNK 139 (156)
Q Consensus 96 ~~k~vlV~F~A~WC~~-Ck~~~p~l~~la~~~~~-----~v~~~~vd~d~ 139 (156)
.|+++||+||++||++ |+.+.|.+.++++++++ ++.++.|++|.
T Consensus 22 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~ 71 (164)
T 2ggt_A 22 LGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDP 71 (164)
T ss_dssp TTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCT
T ss_pred CCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCC
Confidence 5899999999999998 99999999999998853 69999999875
No 185
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.09 E-value=8.6e-11 Score=87.76 Aligned_cols=44 Identities=14% Similarity=0.189 Sum_probs=40.7
Q ss_pred CCCcEEEEEe-CCCChhHHhhhHHHHHHHHHhcC-CeEEEEEECCC
Q 031608 96 LSQPILIDWM-ASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVNK 139 (156)
Q Consensus 96 ~~k~vlV~F~-A~WC~~Ck~~~p~l~~la~~~~~-~v~~~~vd~d~ 139 (156)
.|+++||+|| |+||++|+.+.|.|.++++++.+ ++.++.|++|.
T Consensus 44 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~ 89 (195)
T 2bmx_A 44 PGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDS 89 (195)
T ss_dssp TTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEEEEEESSC
T ss_pred CCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 4899999999 99999999999999999999975 59999999975
No 186
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.09 E-value=6.7e-11 Score=87.58 Aligned_cols=44 Identities=16% Similarity=0.211 Sum_probs=40.5
Q ss_pred CCCcEEEEEe-CCCChhHHhhhHHHHHHHHHhcC-CeEEEEEECCC
Q 031608 96 LSQPILIDWM-ASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVNK 139 (156)
Q Consensus 96 ~~k~vlV~F~-A~WC~~Ck~~~p~l~~la~~~~~-~v~~~~vd~d~ 139 (156)
.|+++||+|| |+||++|+.+.|.|.++++++.+ ++.++.|++|.
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~ 75 (187)
T 1we0_A 30 KGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDT 75 (187)
T ss_dssp SSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSC
T ss_pred CCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCC
Confidence 4899999999 99999999999999999999874 59999999975
No 187
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=99.09 E-value=5.2e-11 Score=80.74 Aligned_cols=54 Identities=17% Similarity=0.235 Sum_probs=47.8
Q ss_pred CCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECC--CCHHHHHHhCCcccee
Q 031608 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVN--KVSKDLVKRGNISVSI 154 (156)
Q Consensus 96 ~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d--~~~~l~~~~~i~sv~~ 154 (156)
...+.++.|+++||++|+.++|.|++++. ++.|..+|++ ++++++.+|| .++|+
T Consensus 14 ~~~~~v~~f~~~~C~~C~~~~~~L~~l~~----~i~~~~vdi~~~~~~el~~~~g-~~vP~ 69 (100)
T 1wjk_A 14 RALPVLTLFTKAPCPLCDEAKEVLQPYKD----RFILQEVDITLPENSTWYERYK-FDIPV 69 (100)
T ss_dssp CCCCEEEEEECSSCHHHHHHHHHTSTTSS----SSEEEEEETTSSTTHHHHHHSS-SSCSE
T ss_pred CCCCEEEEEeCCCCcchHHHHHHHHHhhh----CCeEEEEECCCcchHHHHHHHC-CCCCE
Confidence 46778999999999999999999988653 3899999998 7899999999 99986
No 188
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=99.09 E-value=8.6e-12 Score=100.10 Aligned_cols=62 Identities=16% Similarity=0.115 Sum_probs=47.4
Q ss_pred hhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEE---C-CCCHHHHHHhCCccceec
Q 031608 84 DHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVD---V-NKVSKDLVKRGNISVSIQ 155 (156)
Q Consensus 84 ~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd---~-d~~~~l~~~~~i~sv~~~ 155 (156)
..+.+.+. +..+|+|||+|||||++++|.+++++++++ .+.+| . +++++++++++|.++|+.
T Consensus 190 ~~la~~l~------~~~vV~F~A~WC~~Ck~l~p~le~lA~~l~----~Vd~d~~d~~~~~~~la~~~gI~~vPT~ 255 (291)
T 3kp9_A 190 VGLAAHLR------QIGGTMYGAYWCPHCQDQKELFGAAFDQVP----YVECSPNGPGTPQAQECTEAGITSYPTW 255 (291)
T ss_dssp HHHHHHHH------HTTCEEEECTTCHHHHHHHHHHGGGGGGSC----EEESCSSCSSSCCCHHHHTTTCCSTTEE
T ss_pred HHHHHHhC------CCCEEEEECCCCHHHHHHHHHHHHHHHHcC----EEEEeecCchhhHHHHHHHcCCcccCeE
Confidence 35666663 334799999999999999999999987653 33344 2 237899999999999973
No 189
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.08 E-value=5.5e-11 Score=88.93 Aligned_cols=44 Identities=9% Similarity=0.160 Sum_probs=40.4
Q ss_pred CCCcEEEEEe-CCCChhHHhhhHHHHHHHHHhcC-CeEEEEEECCC
Q 031608 96 LSQPILIDWM-ASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVNK 139 (156)
Q Consensus 96 ~~k~vlV~F~-A~WC~~Ck~~~p~l~~la~~~~~-~v~~~~vd~d~ 139 (156)
.|+++||+|| |+||++|+.+.|.|.++++++.+ ++.++.|+.|.
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~ 77 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDS 77 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSC
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCC
Confidence 5899999999 99999999999999999999864 59999999875
No 190
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=99.07 E-value=9e-11 Score=76.00 Aligned_cols=54 Identities=28% Similarity=0.344 Sum_probs=47.0
Q ss_pred EEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCC----HHHHHHhC--Ccccee
Q 031608 100 ILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKV----SKDLVKRG--NISVSI 154 (156)
Q Consensus 100 vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~----~~l~~~~~--i~sv~~ 154 (156)
-++.|+++||++|+.+.|.|++++.+++ ++.+..+|++++ .++++++| +.++|+
T Consensus 2 ~v~~f~~~~C~~C~~~~~~l~~l~~~~~-~i~~~~vdi~~~~~~~~~l~~~~~~~~~~vP~ 61 (85)
T 1ego_A 2 QTVIFGRSGCPYCVRAKDLAEKLSNERD-DFQYQYVDIRAEGITKEDLQQKAGKPVETVPQ 61 (85)
T ss_dssp EEEEECCTTSTHHHHHHHHHHHHHHHHS-SCEEEEECHHHHTCCSHHHHHHTCCCSCCSCE
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHhcCC-CceEEEEecccChHHHHHHHHHhCCCCceeCe
Confidence 3678999999999999999999998876 499999999754 48888999 899886
No 191
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=99.07 E-value=1.2e-10 Score=84.41 Aligned_cols=68 Identities=10% Similarity=0.168 Sum_probs=52.3
Q ss_pred chhccccCCCCCCCccceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCCh-hHHhhhHHHHHHHHHhcC---CeEEEEE
Q 031608 60 VRVEALWPDLSRPTSVELEPINDSDHLDQILLRAQELSQPILIDWMASWCR-KCIYLKPKLEKLAAEFDT---KLKFYYV 135 (156)
Q Consensus 60 ~~~~~~~~~~~~p~~~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~-~Ck~~~p~l~~la~~~~~---~v~~~~v 135 (156)
+.++..+|++.++... ...+... ++ .|+++||+||++||+ +|+...|.+.++.+++.+ ++.++.|
T Consensus 7 l~~g~~~p~f~l~~~~-G~~~~l~-~~---------~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~i 75 (174)
T 1xzo_A 7 DPLNYEVEPFTFQNQD-GKNVSLE-SL---------KGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISF 75 (174)
T ss_dssp SCCCEECCCCEEECTT-SCEEETG-GG---------TTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred CccccccCCcEEEcCC-CCEEehh-hc---------CCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEE
Confidence 4556677777766542 2333322 23 589999999999999 999999999999988864 3999999
Q ss_pred ECC
Q 031608 136 DVN 138 (156)
Q Consensus 136 d~d 138 (156)
++|
T Consensus 76 s~d 78 (174)
T 1xzo_A 76 SVD 78 (174)
T ss_dssp ESC
T ss_pred EeC
Confidence 997
No 192
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.07 E-value=1.5e-10 Score=86.63 Aligned_cols=70 Identities=13% Similarity=0.152 Sum_probs=53.5
Q ss_pred chhccccCCCCCCCccc--eEecCChhhHHHHHHHhhcCCCcEEEEEe-CCCChhHHhhhHHHHHHHHHhcC-CeEEEEE
Q 031608 60 VRVEALWPDLSRPTSVE--LEPINDSDHLDQILLRAQELSQPILIDWM-ASWCRKCIYLKPKLEKLAAEFDT-KLKFYYV 135 (156)
Q Consensus 60 ~~~~~~~~~~~~p~~~~--~~~i~~~~~~~~~l~~a~~~~k~vlV~F~-A~WC~~Ck~~~p~l~~la~~~~~-~v~~~~v 135 (156)
+.++..+|+|.++.... ...++.. ++ .|+++||+|| |+||++|+.+.|.|.+++++|.+ ++.++.|
T Consensus 5 l~~G~~aP~f~l~~~~~g~~~~v~l~-~~---------~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~I 74 (197)
T 1qmv_A 5 ARIGKPAPDFKATAVVDGAFKEVKLS-DY---------KGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGV 74 (197)
T ss_dssp BCTTSBCCCCEEEEEETTEEEEEEGG-GG---------TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEE
T ss_pred ccCCCCCCCeEeEeecCCCccEEEHH-HH---------CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 45566777877765311 1334322 33 4899999999 99999999999999999999965 6999999
Q ss_pred ECCC
Q 031608 136 DVNK 139 (156)
Q Consensus 136 d~d~ 139 (156)
++|.
T Consensus 75 s~d~ 78 (197)
T 1qmv_A 75 SVDS 78 (197)
T ss_dssp ESSC
T ss_pred ECCC
Confidence 9975
No 193
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.07 E-value=1.6e-10 Score=86.82 Aligned_cols=70 Identities=7% Similarity=0.064 Sum_probs=53.5
Q ss_pred chhccccCCCCCCCcc-ce--EecCChhhHHHHHHHhhcCCCcEEEEEe-CCCChhHHhhhHHHHHHHHHhcC-CeEEEE
Q 031608 60 VRVEALWPDLSRPTSV-EL--EPINDSDHLDQILLRAQELSQPILIDWM-ASWCRKCIYLKPKLEKLAAEFDT-KLKFYY 134 (156)
Q Consensus 60 ~~~~~~~~~~~~p~~~-~~--~~i~~~~~~~~~l~~a~~~~k~vlV~F~-A~WC~~Ck~~~p~l~~la~~~~~-~v~~~~ 134 (156)
+.++..+|+|.++... +. ..++.. ++ .|+++||+|| ++||++|+.+.|.|.+++++|.+ ++.++.
T Consensus 6 ~~~G~~aP~f~l~~~~~~g~~~~v~l~-~~---------~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~ 75 (202)
T 1uul_A 6 AEDLHPAPDFNETALMPNGTFKKVALT-SY---------KGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLA 75 (202)
T ss_dssp CCTTSBCCCCEEEEECTTSCEEEEEGG-GG---------TTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEE
T ss_pred ccCCCcCCCcEeeeeecCCCccEEEHH-Hh---------CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEE
Confidence 4566777777766431 11 334322 33 4899999999 99999999999999999999965 699999
Q ss_pred EECCC
Q 031608 135 VDVNK 139 (156)
Q Consensus 135 vd~d~ 139 (156)
|++|.
T Consensus 76 Is~D~ 80 (202)
T 1uul_A 76 CSMDS 80 (202)
T ss_dssp EESSC
T ss_pred EeCCC
Confidence 99975
No 194
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=99.02 E-value=2e-10 Score=83.23 Aligned_cols=68 Identities=21% Similarity=0.297 Sum_probs=51.0
Q ss_pred chhccccCCCCCCCccceEecCChhhHHHHHHHhhcCCCcEEEEEeCCC-ChhHHhhhHHHHHHHHHhcCCeEEEEEECC
Q 031608 60 VRVEALWPDLSRPTSVELEPINDSDHLDQILLRAQELSQPILIDWMASW-CRKCIYLKPKLEKLAAEFDTKLKFYYVDVN 138 (156)
Q Consensus 60 ~~~~~~~~~~~~p~~~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~W-C~~Ck~~~p~l~~la~~~~~~v~~~~vd~d 138 (156)
+.++...|++.++.. ....+. +.++ .|++++|+||++| |++|+.+.|.+.++++++ .++.++.|+.|
T Consensus 18 ~~~G~~~p~f~l~~~-~G~~~~----l~~~------~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~~~~vv~is~d 85 (167)
T 2jsy_A 18 VKVGDQAPDFTVLTN-SLEEKS----LADM------KGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL-GDVNVYTISAD 85 (167)
T ss_dssp CCTTSCCCCCEEEBT-TCCEEE----HHHH------TTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH-SSCEEEEEECS
T ss_pred cCCCCcCCceEEECC-CCCEee----HHHh------CCCeEEEEEecCCCCCchHHHHHHHHHHHHHc-CCCEEEEEECC
Confidence 445666666665543 222332 2222 4899999999999 999999999999999999 67999999987
Q ss_pred C
Q 031608 139 K 139 (156)
Q Consensus 139 ~ 139 (156)
.
T Consensus 86 ~ 86 (167)
T 2jsy_A 86 L 86 (167)
T ss_dssp S
T ss_pred C
Confidence 4
No 195
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=98.99 E-value=3.4e-10 Score=86.63 Aligned_cols=72 Identities=8% Similarity=0.084 Sum_probs=55.0
Q ss_pred ccchhccccCCCCCCCc--cceEecCChhhHHHHHHHhhcCCCcEEEEEeC-CCChhHHhhhHHHHHHHHHhcC-CeEEE
Q 031608 58 RDVRVEALWPDLSRPTS--VELEPINDSDHLDQILLRAQELSQPILIDWMA-SWCRKCIYLKPKLEKLAAEFDT-KLKFY 133 (156)
Q Consensus 58 r~~~~~~~~~~~~~p~~--~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A-~WC~~Ck~~~p~l~~la~~~~~-~v~~~ 133 (156)
..+.++..+|+|.++.. .....++.. ++ .||++||+||+ +||++|+.+.|.|.+++++|.+ ++.|+
T Consensus 38 ~~l~~G~~aP~f~l~~~~d~~G~~v~l~-~~---------~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv 107 (222)
T 3ztl_A 38 MVLLPNRPAPEFKGQAVINGEFKEICLK-DY---------RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVI 107 (222)
T ss_dssp --CCSSEECCCCEEEEEETTEEEEEEGG-GG---------TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEE
T ss_pred ccccCCCCCCCeEEecccCCCCcEEeHH-Hh---------CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEE
Confidence 35667788888887742 122344322 33 58999999997 9999999999999999999975 59999
Q ss_pred EEECCC
Q 031608 134 YVDVNK 139 (156)
Q Consensus 134 ~vd~d~ 139 (156)
.|++|.
T Consensus 108 ~Is~D~ 113 (222)
T 3ztl_A 108 ACSTDS 113 (222)
T ss_dssp EEESSC
T ss_pred EEECCC
Confidence 999985
No 196
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=98.98 E-value=4.7e-10 Score=85.78 Aligned_cols=71 Identities=14% Similarity=0.138 Sum_probs=53.9
Q ss_pred cchhccccCCCCCCCc--cceEecCChhhHHHHHHHhhcCCCcEEEEEe-CCCChhHHhhhHHHHHHHHHhcC-CeEEEE
Q 031608 59 DVRVEALWPDLSRPTS--VELEPINDSDHLDQILLRAQELSQPILIDWM-ASWCRKCIYLKPKLEKLAAEFDT-KLKFYY 134 (156)
Q Consensus 59 ~~~~~~~~~~~~~p~~--~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~-A~WC~~Ck~~~p~l~~la~~~~~-~v~~~~ 134 (156)
.+.++..+|+|.++.. .....+... ++ .|+++||+|| ++||++|+.+.|.|.+++++|.+ ++.++.
T Consensus 26 ~l~~G~~aP~f~l~~~~~~~g~~v~l~-d~---------~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~ 95 (220)
T 1zye_A 26 APAVTQHAPYFKGTAVVSGEFKEISLD-DF---------KGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVA 95 (220)
T ss_dssp -CCTTSBCCCCEEEEECSSSEEEEEGG-GG---------TTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEE
T ss_pred cccCCCCCCCcEEEeeeCCCCcEEEHH-Hh---------CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEE
Confidence 4566777888877632 123344322 33 4899999999 99999999999999999999953 699999
Q ss_pred EECCC
Q 031608 135 VDVNK 139 (156)
Q Consensus 135 vd~d~ 139 (156)
|++|.
T Consensus 96 Is~D~ 100 (220)
T 1zye_A 96 VSVDS 100 (220)
T ss_dssp EESSC
T ss_pred EECCC
Confidence 99875
No 197
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=98.97 E-value=6.2e-10 Score=84.79 Aligned_cols=71 Identities=13% Similarity=0.117 Sum_probs=53.4
Q ss_pred chhccccCCCCCCCcc-ce--EecCChhhHHHHHHHhhcCCCcEEEEEe-CCCChhHHhhhHHHHHHHHHhc-CCeEEEE
Q 031608 60 VRVEALWPDLSRPTSV-EL--EPINDSDHLDQILLRAQELSQPILIDWM-ASWCRKCIYLKPKLEKLAAEFD-TKLKFYY 134 (156)
Q Consensus 60 ~~~~~~~~~~~~p~~~-~~--~~i~~~~~~~~~l~~a~~~~k~vlV~F~-A~WC~~Ck~~~p~l~~la~~~~-~~v~~~~ 134 (156)
+.++..+|+|.++... .. ..+...+ + ..|+++||+|| |+||++|+.+.|.|.+++++|. .++.++.
T Consensus 21 l~~G~~aP~f~l~~~~~~G~~~~v~l~d-~--------~~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~ 91 (213)
T 2i81_A 21 TYVGKEAPFFKAEAVFGDNSFGEVNLTQ-F--------IGKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLG 91 (213)
T ss_dssp CCBTSBCCCCEEEEECTTSCEEEEEGGG-G--------TTTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEE
T ss_pred ccCCCcCCCeEeeccccCCceeEEeHHH-H--------cCCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEE
Confidence 4566777777766531 12 3343222 1 15899999999 9999999999999999999996 3699999
Q ss_pred EECCC
Q 031608 135 VDVNK 139 (156)
Q Consensus 135 vd~d~ 139 (156)
|++|.
T Consensus 92 Is~D~ 96 (213)
T 2i81_A 92 CSVDS 96 (213)
T ss_dssp EESSC
T ss_pred EeCCC
Confidence 99875
No 198
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=98.97 E-value=8.6e-10 Score=79.41 Aligned_cols=69 Identities=13% Similarity=0.006 Sum_probs=54.0
Q ss_pred chhccccCCCC--CCCccceEecCChhhHHHHHHHhhcCCCcEEEEEeC-CCChhHHhhhHHHHHHHHHhcC-CeEEEEE
Q 031608 60 VRVEALWPDLS--RPTSVELEPINDSDHLDQILLRAQELSQPILIDWMA-SWCRKCIYLKPKLEKLAAEFDT-KLKFYYV 135 (156)
Q Consensus 60 ~~~~~~~~~~~--~p~~~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A-~WC~~Ck~~~p~l~~la~~~~~-~v~~~~v 135 (156)
+.++..+|+|. ++.. ....++.. ++ .|++++|+||+ +||++|+...|.+.++.++|.+ ++.++.|
T Consensus 7 l~~G~~~P~f~~~l~~~-~G~~~~l~-~~---------~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~v 75 (163)
T 3gkn_A 7 AVLELPAATFDLPLSLS-GGTQTTLR-AH---------AGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGV 75 (163)
T ss_dssp CCCCCCGGGGGCCEECS-TTCEECSG-GG---------TTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred cccCCcCCCccccccCC-CCCEEEHH-Hh---------CCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 55677778887 6553 23444433 33 58899999998 9999999999999999999864 5999999
Q ss_pred ECCC
Q 031608 136 DVNK 139 (156)
Q Consensus 136 d~d~ 139 (156)
+.|.
T Consensus 76 s~d~ 79 (163)
T 3gkn_A 76 SRDS 79 (163)
T ss_dssp ESSC
T ss_pred eCCC
Confidence 9984
No 199
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=98.97 E-value=1.4e-09 Score=83.48 Aligned_cols=42 Identities=24% Similarity=0.334 Sum_probs=38.8
Q ss_pred CCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcC-CeEEEEEECC
Q 031608 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVN 138 (156)
Q Consensus 96 ~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~-~v~~~~vd~d 138 (156)
.||++||+|||+||++|+ +.|.|++++++|.+ ++.++.|+++
T Consensus 55 ~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs~d 97 (215)
T 2i3y_A 55 VGKHILFVNVATYCGLTA-QYPELNALQEELKPYGLVVLGFPCN 97 (215)
T ss_dssp TTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCCeEEEEEEcc
Confidence 599999999999999999 99999999999965 5999999976
No 200
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=98.96 E-value=4.4e-10 Score=83.56 Aligned_cols=44 Identities=14% Similarity=0.183 Sum_probs=40.2
Q ss_pred CCCcEEEEEe-CCCChhHHhhhHHHHHHHHHhc-CCeEEEEEECCC
Q 031608 96 LSQPILIDWM-ASWCRKCIYLKPKLEKLAAEFD-TKLKFYYVDVNK 139 (156)
Q Consensus 96 ~~k~vlV~F~-A~WC~~Ck~~~p~l~~la~~~~-~~v~~~~vd~d~ 139 (156)
.|+++||+|| |+||++|+.+.|.|.+++++|. .++.++.|+.|.
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~ 75 (192)
T 2h01_A 30 GKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDS 75 (192)
T ss_dssp TTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSC
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCC
Confidence 5899999999 9999999999999999999985 369999999875
No 201
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=98.96 E-value=7.8e-10 Score=81.25 Aligned_cols=67 Identities=15% Similarity=0.197 Sum_probs=50.6
Q ss_pred chhccccCCCCCCCccceEecCChhhHHHHHHHhhcCCCcEEEEEeCCC-ChhHHhhhHHHHHHHHHhcCCeEEEEEECC
Q 031608 60 VRVEALWPDLSRPTSVELEPINDSDHLDQILLRAQELSQPILIDWMASW-CRKCIYLKPKLEKLAAEFDTKLKFYYVDVN 138 (156)
Q Consensus 60 ~~~~~~~~~~~~p~~~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~W-C~~Ck~~~p~l~~la~~~~~~v~~~~vd~d 138 (156)
+.++..+|++.++.. ....+... ++ .|+++||+||++| |++|+.+.|.|.+++++ .++.++.|+.|
T Consensus 18 l~~G~~~P~f~l~~~-~G~~v~l~-~~---------~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~--~~v~vv~Is~D 84 (175)
T 1xvq_A 18 PAVGSPAPAFTLTGG-DLGVISSD-QF---------RGKSVLLNIFPSVDTPVCATSVRTFDERAAA--SGATVLCVSKD 84 (175)
T ss_dssp CCTTSBCCCCEEECT-TSCEEEGG-GG---------TTSCEEEEECSCCCSSCCCHHHHHHHHHHHH--TTCEEEEEESS
T ss_pred CCcCCcCCCeEEECC-CCCEEeHH-Hc---------CCCEEEEEEEeCCCCchHHHHHHHHHHHHhh--cCCEEEEEECC
Confidence 455666777766653 22333322 23 4899999999999 99999999999999988 46999999997
Q ss_pred C
Q 031608 139 K 139 (156)
Q Consensus 139 ~ 139 (156)
.
T Consensus 85 ~ 85 (175)
T 1xvq_A 85 L 85 (175)
T ss_dssp C
T ss_pred C
Confidence 3
No 202
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=98.95 E-value=1.3e-10 Score=84.36 Aligned_cols=69 Identities=20% Similarity=0.357 Sum_probs=48.8
Q ss_pred chhccccCCCCCCCccceEecCChhhHHHHHHHhhcCCCcEEEEEe-CCCChhHHhhhHHHHHHHHHhcC-CeEEEEEEC
Q 031608 60 VRVEALWPDLSRPTSVELEPINDSDHLDQILLRAQELSQPILIDWM-ASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDV 137 (156)
Q Consensus 60 ~~~~~~~~~~~~p~~~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~-A~WC~~Ck~~~p~l~~la~~~~~-~v~~~~vd~ 137 (156)
+.+|..+|+|.++.. ....+... ++ .||+++|+|| |+||++|+.+.|.+.++++++.+ ++.++.|+.
T Consensus 4 l~vG~~aPdF~l~~~-~G~~~~l~-d~---------~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~ 72 (157)
T 4g2e_A 4 VEIGELAPDFELPDT-ELKKVKLS-AL---------KGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISV 72 (157)
T ss_dssp CCTTSBCCCCEEEBT-TSCEEEGG-GG---------TTSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEES
T ss_pred CCCCCCCcCeEeECC-CCCEEeHH-HH---------CCCeEEEEecCCCCCCccccchhhcccccccccccCceEeeecc
Confidence 567888899988764 33344322 33 5899999999 99999999999999999888864 689999998
Q ss_pred CC
Q 031608 138 NK 139 (156)
Q Consensus 138 d~ 139 (156)
|.
T Consensus 73 d~ 74 (157)
T 4g2e_A 73 DP 74 (157)
T ss_dssp SC
T ss_pred cc
Confidence 75
No 203
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=98.95 E-value=1.4e-09 Score=88.04 Aligned_cols=74 Identities=11% Similarity=0.091 Sum_probs=62.5
Q ss_pred eEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECC--CCHHHHHHhCCcc--c
Q 031608 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVN--KVSKDLVKRGNIS--V 152 (156)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d--~~~~l~~~~~i~s--v 152 (156)
+.+++ .+++.+++. ...++++|.||++||++|+.+.|.|+++++++.+++.|+.+|++ +++++++.||+.+ +
T Consensus 119 v~~~~-~~~~~~~~~---~~~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~i~f~~vd~~~~~~~~~~~~fgi~~~~~ 194 (361)
T 3uem_A 119 VIEFT-EQTAPKIFG---GEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFIFIDSDHTDNQRILEFFGLKKEEC 194 (361)
T ss_dssp EEECS-TTTHHHHHS---CSCCEEEEEECCSSSSSHHHHHHHHHHHHGGGTTTCEEEEECTTSGGGHHHHHHTTCCTTTC
T ss_pred ceecC-cccHHHHhc---CCCCcEEEEEEeCCchhHHHHHHHHHHHHHHccCceEEEEecCChHHHHHHHHHcCCCccCC
Confidence 34444 567888874 23467789999999999999999999999999988999999999 6999999999987 6
Q ss_pred ee
Q 031608 153 SI 154 (156)
Q Consensus 153 ~~ 154 (156)
|.
T Consensus 195 P~ 196 (361)
T 3uem_A 195 PA 196 (361)
T ss_dssp SE
T ss_pred cc
Confidence 64
No 204
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=98.94 E-value=9.1e-10 Score=84.78 Aligned_cols=81 Identities=12% Similarity=0.167 Sum_probs=56.7
Q ss_pred hhccccCCCCCCCccceE--ecCChhhHHHHHHHhhcCCCcEEEEEe-CCCChhHH-hhhHHHHHHHHHhcC-Ce-EEEE
Q 031608 61 RVEALWPDLSRPTSVELE--PINDSDHLDQILLRAQELSQPILIDWM-ASWCRKCI-YLKPKLEKLAAEFDT-KL-KFYY 134 (156)
Q Consensus 61 ~~~~~~~~~~~p~~~~~~--~i~~~~~~~~~l~~a~~~~k~vlV~F~-A~WC~~Ck-~~~p~l~~la~~~~~-~v-~~~~ 134 (156)
.++..+|+|.++...+.. .+ .+.+.+ .||++||+|| |+||++|+ .+.|.|.++++++.+ ++ .++.
T Consensus 4 ~~G~~aP~f~l~~~~~g~~~~v----~l~~~~-----~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~ 74 (241)
T 1nm3_A 4 MEGKKVPQVTFRTRQGDKWVDV----TTSELF-----DNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILV 74 (241)
T ss_dssp CTTSBCCCCEEEEEETTEEEEE----EHHHHH-----TTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEE
T ss_pred cCCCCCCCeEEEcccCCCceee----cHHHHh-----CCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEE
Confidence 356667777766531111 33 233322 4899999999 99999999 999999999998864 69 9999
Q ss_pred EECCCC---HHHHHHhCCc
Q 031608 135 VDVNKV---SKDLVKRGNI 150 (156)
Q Consensus 135 vd~d~~---~~l~~~~~i~ 150 (156)
|+.|.. .+.++++++.
T Consensus 75 is~d~~~~~~~~~~~~~~~ 93 (241)
T 1nm3_A 75 VSVNDTFVMNAWKEDEKSE 93 (241)
T ss_dssp EESSCHHHHHHHHHHTTCT
T ss_pred EEcCCHHHHHHHHHhcCCC
Confidence 999763 2334555553
No 205
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=98.94 E-value=6.4e-10 Score=81.92 Aligned_cols=80 Identities=11% Similarity=0.133 Sum_probs=55.0
Q ss_pred hhccccCCCCCCCcc---ce-----EecCChhhHHHHHHHhhcCCC-cEEEEEeCCCChhHHhh-hHHHHHHHHHhcC-C
Q 031608 61 RVEALWPDLSRPTSV---EL-----EPINDSDHLDQILLRAQELSQ-PILIDWMASWCRKCIYL-KPKLEKLAAEFDT-K 129 (156)
Q Consensus 61 ~~~~~~~~~~~p~~~---~~-----~~i~~~~~~~~~l~~a~~~~k-~vlV~F~A~WC~~Ck~~-~p~l~~la~~~~~-~ 129 (156)
.++..+|+|.++... .. ..+ .+.+++ .|+ ++|++|||+||++|+.+ .|.|.++++++.+ +
T Consensus 8 ~~g~~aP~f~l~~~~~~~~G~~~~~~~v----~l~~~~-----~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g 78 (171)
T 2pwj_A 8 DILSAASNVSLQKARTWDEGVESKFSTT----PVNDIF-----KDKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKG 78 (171)
T ss_dssp --CCCSSSBCCCSCEECCCSSCTTCCCE----EHHHHH-----TTSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTT
T ss_pred cccCcCCCeEEecccccccCCccCcceE----EHHHHh-----CCCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCC
Confidence 345577888887641 11 223 233332 364 67889999999999999 9999999988853 5
Q ss_pred eE-EEEEECCCC---HHHHHHhCC
Q 031608 130 LK-FYYVDVNKV---SKDLVKRGN 149 (156)
Q Consensus 130 v~-~~~vd~d~~---~~l~~~~~i 149 (156)
+. ++.|+.++. ...++++++
T Consensus 79 ~~~vv~Is~d~~~~~~~~~~~~~~ 102 (171)
T 2pwj_A 79 VDSVICVAINDPYTVNAWAEKIQA 102 (171)
T ss_dssp CSEEEEEESSCHHHHHHHHHHTTC
T ss_pred CCEEEEEeCCCHHHHHHHHHHhCC
Confidence 88 999999753 334556665
No 206
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=98.93 E-value=8.4e-10 Score=82.63 Aligned_cols=82 Identities=11% Similarity=0.136 Sum_probs=57.4
Q ss_pred chhccccCCCCCCCc--cceEecCChhhHHHHHHHhhcCCCc-EEEEEeCCCChhHHh-hhHHHHHHHHHhcC-CeE-EE
Q 031608 60 VRVEALWPDLSRPTS--VELEPINDSDHLDQILLRAQELSQP-ILIDWMASWCRKCIY-LKPKLEKLAAEFDT-KLK-FY 133 (156)
Q Consensus 60 ~~~~~~~~~~~~p~~--~~~~~i~~~~~~~~~l~~a~~~~k~-vlV~F~A~WC~~Ck~-~~p~l~~la~~~~~-~v~-~~ 133 (156)
+.++..+|+|.++.. .....+. +.+.+ .|++ +|+.||++||++|+. +.|.|.+++++|.+ ++. ++
T Consensus 26 l~vG~~aPdf~l~~~~~~G~~~v~----L~d~~-----~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv 96 (184)
T 3uma_A 26 IAVGDKLPNATFKEKTADGPVEVT----TELLF-----KGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIA 96 (184)
T ss_dssp CCTTCBCCCCEEEEEETTEEEEEE----HHHHH-----TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEE
T ss_pred CCCCCCCCCcEeecccCCCceEEe----HHHHh-----CCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEE
Confidence 667788888887764 2224443 33322 4675 555667999999999 79999999999864 588 99
Q ss_pred EEECCCC---HHHHHHhCCc
Q 031608 134 YVDVNKV---SKDLVKRGNI 150 (156)
Q Consensus 134 ~vd~d~~---~~l~~~~~i~ 150 (156)
.|+.|+. .+.++++++.
T Consensus 97 ~Is~d~~~~~~~f~~~~~~~ 116 (184)
T 3uma_A 97 VVAVNDLHVMGAWATHSGGM 116 (184)
T ss_dssp EEESSCHHHHHHHHHHHTCT
T ss_pred EEECCCHHHHHHHHHHhCCC
Confidence 9999863 3445556654
No 207
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=98.92 E-value=1.5e-09 Score=81.49 Aligned_cols=44 Identities=18% Similarity=0.212 Sum_probs=38.5
Q ss_pred CCCcEEEEEeCCCChh-HHhhhHHHHHHHHHhc----CCeEEEEEECCC
Q 031608 96 LSQPILIDWMASWCRK-CIYLKPKLEKLAAEFD----TKLKFYYVDVNK 139 (156)
Q Consensus 96 ~~k~vlV~F~A~WC~~-Ck~~~p~l~~la~~~~----~~v~~~~vd~d~ 139 (156)
.|+++||+||++||++ |+.+.|.|.++.+++. +++.++.|++|.
T Consensus 40 ~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~ 88 (200)
T 2b7k_A 40 LGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDP 88 (200)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCT
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCC
Confidence 5899999999999998 9999999999877664 368999999873
No 208
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=98.92 E-value=1e-09 Score=83.41 Aligned_cols=73 Identities=8% Similarity=-0.004 Sum_probs=54.9
Q ss_pred cchhccccCCCCCCCc--cceEecCChhhHHHHHHHhhcCCCcEEEEEe-CCCChhHHhhhHHHHHHHHHhcC-CeEEEE
Q 031608 59 DVRVEALWPDLSRPTS--VELEPINDSDHLDQILLRAQELSQPILIDWM-ASWCRKCIYLKPKLEKLAAEFDT-KLKFYY 134 (156)
Q Consensus 59 ~~~~~~~~~~~~~p~~--~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~-A~WC~~Ck~~~p~l~~la~~~~~-~v~~~~ 134 (156)
.+.++..+|+|.++.. .....+... ++ .||++||+|| |+||++|..+.|.|.+++++|.+ ++.++.
T Consensus 18 ~~~~G~~aP~f~l~~~~~~~g~~v~l~-d~---------~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~ 87 (211)
T 2pn8_A 18 LYFQSMPAPYWEGTAVIDGEFKELKLT-DY---------RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVA 87 (211)
T ss_dssp -CCSSCBCCCCEEEEEETTEEEEEEGG-GG---------TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEE
T ss_pred cCCCCCcCCCeEeecccCCCCcEEEHH-Hh---------CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEE
Confidence 4556777788877642 122344322 33 5899999999 99999999999999999999964 699999
Q ss_pred EECCCCH
Q 031608 135 VDVNKVS 141 (156)
Q Consensus 135 vd~d~~~ 141 (156)
|++|...
T Consensus 88 Is~D~~~ 94 (211)
T 2pn8_A 88 CSVDSQF 94 (211)
T ss_dssp EESSCHH
T ss_pred EECCCHH
Confidence 9997643
No 209
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=98.91 E-value=1.3e-09 Score=78.93 Aligned_cols=78 Identities=12% Similarity=0.033 Sum_probs=57.4
Q ss_pred chhccccCCCCCCCccceEecCChhhHHHHHHHhhcCCCcEEEEEeC-CCChhHHhhhHHHHHHHHHhcCCeEEEEEECC
Q 031608 60 VRVEALWPDLSRPTSVELEPINDSDHLDQILLRAQELSQPILIDWMA-SWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVN 138 (156)
Q Consensus 60 ~~~~~~~~~~~~p~~~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A-~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d 138 (156)
+.++..+|++.++.. ....++.. ++ .||++||+||+ +||++|..+.|.|.++++++ .++.++.|+.|
T Consensus 16 ~~~G~~~P~f~l~~~-~G~~v~l~-~~---------~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~-~~v~vv~is~d 83 (163)
T 1psq_A 16 LQVGDKALDFSLTTT-DLSKKSLA-DF---------DGKKKVLSVVPSIDTGICSTQTRRFNEELAGL-DNTVVLTVSMD 83 (163)
T ss_dssp CCTTSBCCCCEEECT-TSCEEEGG-GG---------TTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESS
T ss_pred CCCCCCCCCEEEEcC-CCcEeeHH-Hh---------CCCEEEEEEECCCCCCccHHHHHHHHHHHHHc-CCcEEEEEECC
Confidence 455667777776654 22333322 23 58999999995 99999999999999999988 67999999998
Q ss_pred CCH---HHHHHhCC
Q 031608 139 KVS---KDLVKRGN 149 (156)
Q Consensus 139 ~~~---~l~~~~~i 149 (156)
... +.++++++
T Consensus 84 ~~~~~~~~~~~~~~ 97 (163)
T 1psq_A 84 LPFAQKRWCGAEGL 97 (163)
T ss_dssp CHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHhcCC
Confidence 643 23455665
No 210
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=98.91 E-value=2e-09 Score=78.15 Aligned_cols=54 Identities=11% Similarity=0.131 Sum_probs=44.0
Q ss_pred CCCcEEEEEe-CCCChhHH-hhhHHHHHHHHHhc-CCeE-EEEEECCCCH---HHHHHhCC
Q 031608 96 LSQPILIDWM-ASWCRKCI-YLKPKLEKLAAEFD-TKLK-FYYVDVNKVS---KDLVKRGN 149 (156)
Q Consensus 96 ~~k~vlV~F~-A~WC~~Ck-~~~p~l~~la~~~~-~~v~-~~~vd~d~~~---~l~~~~~i 149 (156)
.||+++|+|| ++||++|. .+.|.|.++++++. .++. ++.|+.|... +.++++++
T Consensus 34 ~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~d~~~~~~~~~~~~~~ 94 (162)
T 1tp9_A 34 AGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISVNDPFVMKAWAKSYPE 94 (162)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEESSCHHHHHHHHHTCTT
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHhcCC
Confidence 5899999999 89999999 89999999999886 3688 9999987532 33445554
No 211
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=98.90 E-value=1.3e-09 Score=79.29 Aligned_cols=70 Identities=10% Similarity=0.068 Sum_probs=53.6
Q ss_pred cchhccccCCCCCCCccceEecCChhhHHHHHHHhhcCCCcEEEEEe-CCCChhHHhhhHHHHHHHHHhcCCeEEEEEEC
Q 031608 59 DVRVEALWPDLSRPTSVELEPINDSDHLDQILLRAQELSQPILIDWM-ASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDV 137 (156)
Q Consensus 59 ~~~~~~~~~~~~~p~~~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~-A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~ 137 (156)
.+.++..+|++.++... ...+... ++ .||++||+|| ++||++|..+.|.|.++++++ .++.++.|+.
T Consensus 16 ~~~~G~~~P~f~l~~~~-G~~v~l~-~~---------~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~-~~v~vv~Is~ 83 (165)
T 1q98_A 16 FPQVGEIVENFILVGND-LADVALN-DF---------ASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL-SNTIVLCISA 83 (165)
T ss_dssp CCCTTCBCCCCEEECTT-SCEEEGG-GG---------TTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS-TTEEEEEEES
T ss_pred cCCCCCCCCCeEEECCC-CCEEehH-Hh---------CCCeEEEEEECCCCCCccHHHHHHHHHHHHHc-CCCEEEEEeC
Confidence 34566777787776542 2333322 23 5899999999 899999999999999999999 6799999998
Q ss_pred CCC
Q 031608 138 NKV 140 (156)
Q Consensus 138 d~~ 140 (156)
|..
T Consensus 84 d~~ 86 (165)
T 1q98_A 84 DLP 86 (165)
T ss_dssp SCH
T ss_pred CCH
Confidence 753
No 212
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=98.90 E-value=2.7e-09 Score=81.21 Aligned_cols=42 Identities=19% Similarity=0.081 Sum_probs=38.5
Q ss_pred CCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcC-CeEEEEEECC
Q 031608 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVN 138 (156)
Q Consensus 96 ~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~-~v~~~~vd~d 138 (156)
.||++||+|||+||++| .+.|.|.+++++|.+ ++.++.|+++
T Consensus 37 kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs~d 79 (207)
T 2r37_A 37 AGKYVLFVNVASYGGLT-GQYIELNALQEELAPFGLVILGFPCN 79 (207)
T ss_dssp TTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCCEEEEEEECc
Confidence 59999999999999999 789999999999975 5999999976
No 213
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=98.89 E-value=1.6e-09 Score=79.67 Aligned_cols=79 Identities=9% Similarity=0.047 Sum_probs=55.6
Q ss_pred hhccccCCCCCC-CccceEecCChhhHHHHHHHhhcCCCcEEEEEe-CCCChhHHh-hhHHHHHHHHHhcC-Ce-EEEEE
Q 031608 61 RVEALWPDLSRP-TSVELEPINDSDHLDQILLRAQELSQPILIDWM-ASWCRKCIY-LKPKLEKLAAEFDT-KL-KFYYV 135 (156)
Q Consensus 61 ~~~~~~~~~~~p-~~~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~-A~WC~~Ck~-~~p~l~~la~~~~~-~v-~~~~v 135 (156)
.++..+|+|.++ .. ....+ .+.+++ .|++++|+|| |+||++|+. +.|.|.++++++.+ ++ .++.|
T Consensus 4 ~~G~~aP~f~l~~~~-~G~~v----~L~d~~-----~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~I 73 (167)
T 2wfc_A 4 KEGDKLPAVTVFGAT-PNDKV----NMAELF-----AGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACM 73 (167)
T ss_dssp CTTCBCCCCEEESSS-TTCEE----EHHHHT-----TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEE
T ss_pred CCCCcCCCcEeecCC-CCcEE----eHHHHh-----CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEE
Confidence 456667777766 43 22233 233332 4888999886 999999999 99999999988853 69 99999
Q ss_pred ECCCCH---HHHHHhCC
Q 031608 136 DVNKVS---KDLVKRGN 149 (156)
Q Consensus 136 d~d~~~---~l~~~~~i 149 (156)
+.|... +.++++++
T Consensus 74 s~d~~~~~~~~~~~~~~ 90 (167)
T 2wfc_A 74 AVNDSFVMDAWGKAHGA 90 (167)
T ss_dssp ESSCHHHHHHHHHHTTC
T ss_pred eCCCHHHHHHHHHhcCC
Confidence 997632 34555555
No 214
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=98.89 E-value=8.2e-11 Score=86.20 Aligned_cols=72 Identities=18% Similarity=0.387 Sum_probs=56.3
Q ss_pred cchhccccCCCCCCCccceEecCChhhHHHHHHHhhcCCCcEEEEEe-CCCChhHHhhhHHHHHHHHHhcC-CeEEEEEE
Q 031608 59 DVRVEALWPDLSRPTSVELEPINDSDHLDQILLRAQELSQPILIDWM-ASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVD 136 (156)
Q Consensus 59 ~~~~~~~~~~~~~p~~~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~-A~WC~~Ck~~~p~l~~la~~~~~-~v~~~~vd 136 (156)
-+.+|..+|+|.+++. ....+ .+.++. ..||++++.|| |+||++|..+.|.|.++.+++.+ ++.++.|+
T Consensus 4 ml~vG~~aPdF~l~~~-~G~~v----~Lsd~~----~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~is 74 (164)
T 4gqc_A 4 LVELGEKAPDFTLPNQ-DFEPV----NLYEVL----KRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAIS 74 (164)
T ss_dssp CCCTTSBCCCCEEEBT-TSCEE----EHHHHH----HTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEEEE
T ss_pred cccCCCCCcCcEeECC-CCCEE----EHHHHh----cCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEEec
Confidence 3567888999988764 23333 344444 36899999998 99999999999999999888865 59999999
Q ss_pred CCC
Q 031608 137 VNK 139 (156)
Q Consensus 137 ~d~ 139 (156)
.|.
T Consensus 75 ~d~ 77 (164)
T 4gqc_A 75 VDS 77 (164)
T ss_dssp SSC
T ss_pred CCC
Confidence 875
No 215
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=98.88 E-value=1.1e-09 Score=84.13 Aligned_cols=72 Identities=10% Similarity=0.053 Sum_probs=53.8
Q ss_pred chhccccCCCCCCCcc-ce--EecCChhhHHHHHHHhhcCCCcEEEEEe-CCCChhHHhhhHHHHHHHHHhc-CCeEEEE
Q 031608 60 VRVEALWPDLSRPTSV-EL--EPINDSDHLDQILLRAQELSQPILIDWM-ASWCRKCIYLKPKLEKLAAEFD-TKLKFYY 134 (156)
Q Consensus 60 ~~~~~~~~~~~~p~~~-~~--~~i~~~~~~~~~l~~a~~~~k~vlV~F~-A~WC~~Ck~~~p~l~~la~~~~-~~v~~~~ 134 (156)
+.++..+|+|.++... .. ..+...+ + ..||++||+|| |+||++|+.+.|.|.+++++|. .++.++.
T Consensus 25 l~~G~~aP~F~l~~~~~~G~~~~v~L~d-~--------~~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~ 95 (221)
T 2c0d_A 25 SLVTKKAYNFTAQGLNKNNEIINVDLSS-F--------IGQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLG 95 (221)
T ss_dssp -CTTSBCCCCEEEEECTTSCEEEEEGGG-G--------TTTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEE
T ss_pred CCCCCCCCCeEEeccccCCCccEEeHHH-H--------cCCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEE
Confidence 5567777888776531 12 3343222 2 15899999999 9999999999999999999985 3699999
Q ss_pred EECCCC
Q 031608 135 VDVNKV 140 (156)
Q Consensus 135 vd~d~~ 140 (156)
|++|..
T Consensus 96 Is~D~~ 101 (221)
T 2c0d_A 96 ISVDSV 101 (221)
T ss_dssp EESSCH
T ss_pred EeCCCH
Confidence 999763
No 216
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=98.86 E-value=3.1e-09 Score=77.83 Aligned_cols=66 Identities=17% Similarity=0.298 Sum_probs=49.3
Q ss_pred hccccC-CCCCCCccceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCCh-hHHhhhHHHHHHHHHhc---CCeEEEEEE
Q 031608 62 VEALWP-DLSRPTSVELEPINDSDHLDQILLRAQELSQPILIDWMASWCR-KCIYLKPKLEKLAAEFD---TKLKFYYVD 136 (156)
Q Consensus 62 ~~~~~~-~~~~p~~~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~-~Ck~~~p~l~~la~~~~---~~v~~~~vd 136 (156)
++..+| +|.++.. ....+... ++ .||++||+||++||+ .|..+.|.+.++.+++. .++.++.|+
T Consensus 3 ~G~~~P~~f~l~d~-~G~~v~l~-~~---------~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is 71 (170)
T 3me7_A 3 LGTYVPGDITLVDS-YGNEFQLK-NL---------KGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFT 71 (170)
T ss_dssp TTCBCCTTCEEEET-TCCEEEGG-GG---------TTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEE
T ss_pred CCCcCCCCeEEEcC-CcCEEchH-Hh---------CCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEE
Confidence 455666 6666543 22333322 33 489999999999997 69999999999999985 358999998
Q ss_pred CC
Q 031608 137 VN 138 (156)
Q Consensus 137 ~d 138 (156)
+|
T Consensus 72 ~d 73 (170)
T 3me7_A 72 FD 73 (170)
T ss_dssp CC
T ss_pred CC
Confidence 86
No 217
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=98.86 E-value=1.9e-09 Score=78.63 Aligned_cols=78 Identities=12% Similarity=-0.021 Sum_probs=55.7
Q ss_pred chhccccCCCCCCCccceEecCChhhHHHHHHHhhcCCCcEEEEEe-CCCChhHHhhhHHHHHHHHHhcCCeEEEEEECC
Q 031608 60 VRVEALWPDLSRPTSVELEPINDSDHLDQILLRAQELSQPILIDWM-ASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVN 138 (156)
Q Consensus 60 ~~~~~~~~~~~~p~~~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~-A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d 138 (156)
+.++...|++.++.. ....++.. ++ .|++++|+|| ++||++|..+.|.+.++.+++ .++.++.|+.|
T Consensus 21 l~~g~~~P~f~l~~~-~G~~~~l~-~~---------~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~-~~v~vv~Is~d 88 (171)
T 2yzh_A 21 LKVGDRAPEAVVVTK-DLQEKIVG-GA---------KDVVQVIITVPSLDTPVCETETKKFNEIMAGM-EGVDVTVVSMD 88 (171)
T ss_dssp CCTTSBCCCEEEEET-TSCEEEES-SC---------CSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESS
T ss_pred CCCCCcCCceEEECC-CCCEeeHH-Hh---------CCCeEEEEEECCCCCCchHHHHHHHHHHHHHc-CCceEEEEeCC
Confidence 445666666665543 12222212 22 5899999999 899999999999999999988 67999999998
Q ss_pred CCH---HHHHHhCC
Q 031608 139 KVS---KDLVKRGN 149 (156)
Q Consensus 139 ~~~---~l~~~~~i 149 (156)
... +.++++++
T Consensus 89 ~~~~~~~~~~~~~~ 102 (171)
T 2yzh_A 89 LPFAQKRFCESFNI 102 (171)
T ss_dssp CHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHcCC
Confidence 643 33455655
No 218
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=98.85 E-value=1.1e-09 Score=82.96 Aligned_cols=45 Identities=16% Similarity=0.428 Sum_probs=41.6
Q ss_pred CCCcEEEEEeCCCChhHHhhhHHH---HHHHHHhcCCeEEEEEECCCC
Q 031608 96 LSQPILIDWMASWCRKCIYLKPKL---EKLAAEFDTKLKFYYVDVNKV 140 (156)
Q Consensus 96 ~~k~vlV~F~A~WC~~Ck~~~p~l---~~la~~~~~~v~~~~vd~d~~ 140 (156)
.++++||+||+.|||||+.+.|.+ +++++++++++.|.+++++.+
T Consensus 112 ~~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~~v~~~~~~v~~~ 159 (197)
T 1un2_A 112 AGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTKYHVNFM 159 (197)
T ss_dssp TTCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCTTCCEEEEECSSS
T ss_pred CCCCEEEEEECCCChhHHHhCcccccHHHHHHHCCCCCEEEEeccCcC
Confidence 468999999999999999999999 999999988899999999864
No 219
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=98.83 E-value=3.5e-09 Score=78.50 Aligned_cols=86 Identities=10% Similarity=0.106 Sum_probs=57.1
Q ss_pred cccccchhccccCCCCCC-CccceEecCChhhHHHHHHHhhcCCCcEEE-EEeCCCChhHH-hhhHHHHHHHHHhcC-Ce
Q 031608 55 SARRDVRVEALWPDLSRP-TSVELEPINDSDHLDQILLRAQELSQPILI-DWMASWCRKCI-YLKPKLEKLAAEFDT-KL 130 (156)
Q Consensus 55 ~~~r~~~~~~~~~~~~~p-~~~~~~~i~~~~~~~~~l~~a~~~~k~vlV-~F~A~WC~~Ck-~~~p~l~~la~~~~~-~v 130 (156)
+......++..+|+|.++ .. ....+. +.+.+ .|++++| +|||+||++|. .+.|.|.+++++|.+ ++
T Consensus 10 ~~~~~~~vG~~aPdf~l~~~~-~g~~v~----L~d~~-----~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv 79 (173)
T 3mng_A 10 HGSAPIKVGDAIPAVEVFEGE-PGNKVN----LAELF-----KGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGV 79 (173)
T ss_dssp ---CCCCTTCBCCCCEEECSS-TTCEEE----HHHHT-----TTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTC
T ss_pred CCCCCCCCCCCCCCeEeeeCC-CCCEEE----hHHHh-----CCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCC
Confidence 455667788889999887 43 233342 32322 4776555 55699999999 599999999999864 58
Q ss_pred EEEE-EECCCC---HHHHHHhCCc
Q 031608 131 KFYY-VDVNKV---SKDLVKRGNI 150 (156)
Q Consensus 131 ~~~~-vd~d~~---~~l~~~~~i~ 150 (156)
.++. |+.|.. .+.++++++.
T Consensus 80 ~vv~~iS~D~~~~~~~f~~~~~~~ 103 (173)
T 3mng_A 80 QVVACLSVNDAFVTGEWGRAHKAE 103 (173)
T ss_dssp CEEEEEESSCHHHHHHHHHHTTCT
T ss_pred EEEEEEcCCCHHHHHHHHHHhCCC
Confidence 8886 888752 3445555553
No 220
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=98.82 E-value=4e-09 Score=78.37 Aligned_cols=45 Identities=7% Similarity=-0.006 Sum_probs=40.2
Q ss_pred CCCcEEEEEeC-CCChhHHhhhHHHHHHHHHhcC-CeEEEEEECCCC
Q 031608 96 LSQPILIDWMA-SWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVNKV 140 (156)
Q Consensus 96 ~~k~vlV~F~A-~WC~~Ck~~~p~l~~la~~~~~-~v~~~~vd~d~~ 140 (156)
.||++||+||+ +||++|+.+.|.|.++++++.+ ++.++.|+.|..
T Consensus 29 ~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d~~ 75 (186)
T 1n8j_A 29 EGRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDTH 75 (186)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCH
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCCH
Confidence 48999999995 9999999999999999998864 699999999863
No 221
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=98.81 E-value=5.3e-09 Score=77.17 Aligned_cols=68 Identities=9% Similarity=-0.044 Sum_probs=53.0
Q ss_pred hhccccCCCCCCCccceEecCChhhHHHHHHHhhcCCCcEEEEEe-CCCChhHHhhhHHHHHHHHHhcC-CeEEEEEECC
Q 031608 61 RVEALWPDLSRPTSVELEPINDSDHLDQILLRAQELSQPILIDWM-ASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVN 138 (156)
Q Consensus 61 ~~~~~~~~~~~p~~~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~-A~WC~~Ck~~~p~l~~la~~~~~-~v~~~~vd~d 138 (156)
.++..+|+|.++.. ....+... +| .||++||+|| ++||++|....|.|.+++++|.+ ++.++.|+.|
T Consensus 26 ~ig~~aP~f~l~~~-~G~~v~l~-d~---------~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D 94 (179)
T 3ixr_A 26 TLNHSLLNHPLMLS-GSTCKTLS-DY---------TNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRD 94 (179)
T ss_dssp BCCHHHHHCCEEEG-GGEEECGG-GG---------TTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESC
T ss_pred ccCCcCCCeeEECC-CCCEEeHH-HH---------CCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCC
Confidence 33444788887764 33455433 33 5889999998 99999999999999999999965 5999999987
Q ss_pred C
Q 031608 139 K 139 (156)
Q Consensus 139 ~ 139 (156)
.
T Consensus 95 ~ 95 (179)
T 3ixr_A 95 S 95 (179)
T ss_dssp C
T ss_pred C
Confidence 5
No 222
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=98.81 E-value=5.8e-09 Score=75.70 Aligned_cols=79 Identities=11% Similarity=0.064 Sum_probs=57.9
Q ss_pred ccchhccccCCCCCCCccceEecCChhhHHHHHHHhhcCCCcEEEEEe-CCCChhHHhhhHHHHHHHHHhcCCeEEEEEE
Q 031608 58 RDVRVEALWPDLSRPTSVELEPINDSDHLDQILLRAQELSQPILIDWM-ASWCRKCIYLKPKLEKLAAEFDTKLKFYYVD 136 (156)
Q Consensus 58 r~~~~~~~~~~~~~p~~~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~-A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd 136 (156)
..+.++..+|+|.++... ...+... ++ .||+++|+|| ++||++|....|.|.+++++ .++.++.|+
T Consensus 18 ~~l~~G~~aP~f~l~~~~-G~~~~l~-~~---------~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~--~~~~vv~is 84 (166)
T 3p7x_A 18 QQINEGDFAPDFTVLDND-LNQVTLA-DY---------AGKKKLISVVPSIDTGVCDQQTRKFNSDASK--EEGIVLTIS 84 (166)
T ss_dssp CCCCTTSBCCCCEEECTT-SCEEEGG-GG---------TTSCEEEEECSCTTSHHHHHHHHHHHHHSCT--TTSEEEEEE
T ss_pred ccCCCCCCCCCeEEEcCC-CCEEeHH-Hh---------CCCcEEEEEECCCCCCccHHHHHHHHHHhhc--CCCEEEEEE
Confidence 345667788888877642 2333322 33 5899999999 78999999999999999877 469999999
Q ss_pred CCCCH---HHHHHhCC
Q 031608 137 VNKVS---KDLVKRGN 149 (156)
Q Consensus 137 ~d~~~---~l~~~~~i 149 (156)
.|... +.++++++
T Consensus 85 ~d~~~~~~~~~~~~~~ 100 (166)
T 3p7x_A 85 ADLPFAQKRWCASAGL 100 (166)
T ss_dssp SSCHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHcCC
Confidence 88643 33556665
No 223
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=98.79 E-value=8.7e-09 Score=75.63 Aligned_cols=74 Identities=15% Similarity=0.262 Sum_probs=52.4
Q ss_pred hccccCCCCCCCccceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCCh-hHHhhhHHHHHHHHHhc---CCeEEEEEEC
Q 031608 62 VEALWPDLSRPTSVELEPINDSDHLDQILLRAQELSQPILIDWMASWCR-KCIYLKPKLEKLAAEFD---TKLKFYYVDV 137 (156)
Q Consensus 62 ~~~~~~~~~~p~~~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~-~Ck~~~p~l~~la~~~~---~~v~~~~vd~ 137 (156)
++.+.|+|.++.. ....++ ..+| .||++||+||++||+ +|....+.+.++.+.++ .++.++.|++
T Consensus 8 ~~~~~PdF~L~d~-~G~~v~-l~d~---------~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isv 76 (170)
T 4hde_A 8 LNWDLETFQFTNQ-DGKPFG-TKDL---------KGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSV 76 (170)
T ss_dssp CCBCCCCCEEECT-TSCEEE-HHHH---------TTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEES
T ss_pred CCCcCCCcEEECC-CCCEEe-HHHh---------CCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeec
Confidence 3556677777664 334443 2234 599999999999996 79999999988877663 3588888888
Q ss_pred C---CCHHHHHH
Q 031608 138 N---KVSKDLVK 146 (156)
Q Consensus 138 d---~~~~l~~~ 146 (156)
| +.++.+++
T Consensus 77 Dp~~Dtp~~l~~ 88 (170)
T 4hde_A 77 DPDLDKPENLKA 88 (170)
T ss_dssp CTTTCCHHHHHH
T ss_pred CcccccHHHHHH
Confidence 6 34554443
No 224
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=98.79 E-value=6.5e-09 Score=74.73 Aligned_cols=70 Identities=13% Similarity=0.110 Sum_probs=49.7
Q ss_pred chhccccCCCCCCCccceEecCChhhHHHHHHHhhcCCCcEEEEEe-CCCChhHHhhhHHHHHHHHHhcC-CeEEEEEEC
Q 031608 60 VRVEALWPDLSRPTSVELEPINDSDHLDQILLRAQELSQPILIDWM-ASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDV 137 (156)
Q Consensus 60 ~~~~~~~~~~~~p~~~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~-A~WC~~Ck~~~p~l~~la~~~~~-~v~~~~vd~ 137 (156)
+.++..+|++.+++.. ...+ .+.++. ..++++||+|| ++||++|+.+.|.|.++++++.+ + .++.|+.
T Consensus 7 ~~~G~~~P~f~l~~~~-G~~v----~l~~~~----gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~-~vv~is~ 76 (159)
T 2a4v_A 7 LEIGDPIPDLSLLNED-NDSI----SLKKIT----ENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYA-AVFGLSA 76 (159)
T ss_dssp CCTTCBCCSCEEECTT-SCEE----EHHHHH----HHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC-EEEEEES
T ss_pred CCCCCCCCCeEEECCC-CCEE----eHHHHh----CCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC-cEEEEeC
Confidence 4556677777666532 2233 233333 12348999987 99999999999999999999874 5 8888888
Q ss_pred CC
Q 031608 138 NK 139 (156)
Q Consensus 138 d~ 139 (156)
|.
T Consensus 77 d~ 78 (159)
T 2a4v_A 77 DS 78 (159)
T ss_dssp CC
T ss_pred CC
Confidence 74
No 225
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=98.78 E-value=8.8e-09 Score=79.96 Aligned_cols=73 Identities=10% Similarity=0.100 Sum_probs=56.4
Q ss_pred cchhccccCCCCCCCc--cceEecCChhhHHHHHHHhhcCCCcEEEEEeC-CCChhHHhhhHHHHHHHHHhcC-CeEEEE
Q 031608 59 DVRVEALWPDLSRPTS--VELEPINDSDHLDQILLRAQELSQPILIDWMA-SWCRKCIYLKPKLEKLAAEFDT-KLKFYY 134 (156)
Q Consensus 59 ~~~~~~~~~~~~~p~~--~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A-~WC~~Ck~~~p~l~~la~~~~~-~v~~~~ 134 (156)
.+.++..+|+|.+++. .+...+... +| .||++||+||+ +||++|..+.|.|.+++++|.+ ++.++.
T Consensus 47 ~l~vG~~aPdF~l~~~~d~~G~~vsLs-d~---------~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~ 116 (240)
T 3qpm_A 47 KAKISKPAPQWEGTAVINGEFKELKLS-DY---------RGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVA 116 (240)
T ss_dssp SCCTTSBCCCCEEEEEETTEEEEEEGG-GG---------TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred cCCCCCCCCCcEeeeeeCCCCcEEEHH-Hh---------CCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEE
Confidence 4567888888887643 122344323 33 58999999999 9999999999999999999974 699999
Q ss_pred EECCCCH
Q 031608 135 VDVNKVS 141 (156)
Q Consensus 135 vd~d~~~ 141 (156)
|++|...
T Consensus 117 Is~D~~~ 123 (240)
T 3qpm_A 117 CSVDSQF 123 (240)
T ss_dssp EESSCHH
T ss_pred EECCCHH
Confidence 9998643
No 226
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=98.77 E-value=5.8e-09 Score=70.18 Aligned_cols=52 Identities=15% Similarity=0.192 Sum_probs=40.0
Q ss_pred EEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCC-------HHHHHHhCCcccee
Q 031608 100 ILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKV-------SKDLVKRGNISVSI 154 (156)
Q Consensus 100 vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~-------~~l~~~~~i~sv~~ 154 (156)
.++.|+++|||+|+++.|.|+++...+++ +..+|++.+ .++.+.+|+.++|+
T Consensus 13 ~v~~f~~~~C~~C~~~~~~L~~~~~~~~~---~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~ 71 (105)
T 1kte_A 13 KVVVFIKPTCPFCRKTQELLSQLPFKEGL---LEFVDITATSDTNEIQDYLQQLTGARTVPR 71 (105)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHSCBCTTS---EEEEEGGGSTTHHHHHHHHHHHHSCCCSCE
T ss_pred CEEEEEcCCCHhHHHHHHHHHHcCCCCCc---cEEEEccCCCCHHHHHHHHHHHhCCCCcCe
Confidence 36679999999999999999987655442 555676654 35778899999986
No 227
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=98.77 E-value=6e-09 Score=78.57 Aligned_cols=71 Identities=11% Similarity=0.069 Sum_probs=54.6
Q ss_pred cchhccccCCCCCCCccceEecCChhhHHHHHHHhhcCCCcEEEEEe-CCCChhHHhhhHHHHHHHHHhcCCeEEEEEEC
Q 031608 59 DVRVEALWPDLSRPTSVELEPINDSDHLDQILLRAQELSQPILIDWM-ASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDV 137 (156)
Q Consensus 59 ~~~~~~~~~~~~~p~~~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~-A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~ 137 (156)
.+.++..+|+|.+++.. ...+... ++ .||+++|+|| ++||++|..+.|.|.++++++ .++.++.|+.
T Consensus 51 ~l~~G~~aPdf~l~d~~-G~~v~L~-d~---------~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~-~~v~vv~Is~ 118 (200)
T 3zrd_A 51 LPQIGDKAKDFTLVAKD-LSDVALS-SF---------AGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL-ENTVVLCISS 118 (200)
T ss_dssp CCCTTCBCCCCEEECTT-SCEEEGG-GG---------TTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS-TTEEEEEEES
T ss_pred cCCCCCCCCCeEEECCC-CCEEcHH-Hh---------CCCcEEEEEECCCCCchhHHHHHHHHHHHHHh-CCCEEEEEEC
Confidence 45667777888776642 2333322 33 5899999999 789999999999999999999 5699999999
Q ss_pred CCCH
Q 031608 138 NKVS 141 (156)
Q Consensus 138 d~~~ 141 (156)
|...
T Consensus 119 D~~~ 122 (200)
T 3zrd_A 119 DLPF 122 (200)
T ss_dssp SCHH
T ss_pred CCHH
Confidence 8543
No 228
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.74 E-value=1.1e-08 Score=74.55 Aligned_cols=41 Identities=10% Similarity=0.250 Sum_probs=35.7
Q ss_pred CCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEEC
Q 031608 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDV 137 (156)
Q Consensus 96 ~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~ 137 (156)
+++++|+.||.+|||+|+.+.|.++++.+++++ +.++..++
T Consensus 21 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-v~~~~~~~ 61 (175)
T 3gyk_A 21 EGDVTVVEFFDYNCPYCRRAMAEVQGLVDADPN-VRLVYREW 61 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-EEEEEEEC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHhCCC-EEEEEEeC
Confidence 578999999999999999999999999998875 66666663
No 229
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=98.74 E-value=1.6e-08 Score=64.74 Aligned_cols=48 Identities=17% Similarity=0.342 Sum_probs=39.9
Q ss_pred EEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHH---HhCCcccee
Q 031608 101 LIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLV---KRGNISVSI 154 (156)
Q Consensus 101 lV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~---~~~i~sv~~ 154 (156)
++.|+++||++|+++.+.|++. ++.+..+|+++++++.+ ++|+.++|+
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~------~i~~~~vdi~~~~~~~~~~~~~g~~~vP~ 53 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR------GFDFEMINVDRVPEAAEALRAQGFRQLPV 53 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT------TCCCEEEETTTCHHHHHHHHHTTCCSSCE
T ss_pred EEEEcCCCChhHHHHHHHHHHC------CCCeEEEECCCCHHHHHHHHHhCCCccCE
Confidence 6779999999999999998863 37788899998876654 589999886
No 230
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=98.70 E-value=2.7e-08 Score=76.43 Aligned_cols=70 Identities=21% Similarity=0.354 Sum_probs=52.5
Q ss_pred cchhccccCCCCCCCccceEecCChhhHHHHHHHhhcCCC--cEEEEEeCCCChhHHhhhHHHHHHHHHhcC-CeEEEEE
Q 031608 59 DVRVEALWPDLSRPTSVELEPINDSDHLDQILLRAQELSQ--PILIDWMASWCRKCIYLKPKLEKLAAEFDT-KLKFYYV 135 (156)
Q Consensus 59 ~~~~~~~~~~~~~p~~~~~~~i~~~~~~~~~l~~a~~~~k--~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~-~v~~~~v 135 (156)
.+.++..+|+|.+++... .++ +.+.. |+ .+|+.|||+||++|..+.|.|.+++++|.+ ++.++.|
T Consensus 4 ~l~~G~~aP~F~l~~~~G--~v~----l~d~~------Gk~~vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~I 71 (224)
T 1prx_A 4 GLLLGDVAPNFEANTTVG--RIR----FHDFL------GDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIAL 71 (224)
T ss_dssp -CCTTCBCCCCEEEETTE--EEE----HHHHH------TTSEEEEEEESCSSCHHHHHHHHHHHHHHHHHHTTTEEEEEE
T ss_pred cCCCcCCCCCcEEecCCC--CEE----HHHHc------CCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 456677788887765433 342 33333 55 567777999999999999999999999965 6999999
Q ss_pred ECCCC
Q 031608 136 DVNKV 140 (156)
Q Consensus 136 d~d~~ 140 (156)
++|..
T Consensus 72 S~D~~ 76 (224)
T 1prx_A 72 SIDSV 76 (224)
T ss_dssp ESSCH
T ss_pred cCCCH
Confidence 99864
No 231
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=98.67 E-value=3.8e-08 Score=61.74 Aligned_cols=49 Identities=16% Similarity=0.291 Sum_probs=41.0
Q ss_pred EEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHH---HhCCccceec
Q 031608 101 LIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLV---KRGNISVSIQ 155 (156)
Q Consensus 101 lV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~---~~~i~sv~~~ 155 (156)
++.|+++||++|++..+.++++ ++.+..+|+++++++.. ++|+.++|+-
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~------~i~~~~~di~~~~~~~~~~~~~~~~~vP~l 54 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA------GLAYNTVDISLDDEARDYVMALGYVQAPVV 54 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT------TCCCEEEETTTCHHHHHHHHHTTCBCCCEE
T ss_pred EEEEeCCCChHHHHHHHHHHHc------CCCcEEEECCCCHHHHHHHHHcCCCccCEE
Confidence 5779999999999999999864 37788899998877665 7999998863
No 232
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.66 E-value=1.8e-08 Score=76.75 Aligned_cols=38 Identities=13% Similarity=0.282 Sum_probs=31.5
Q ss_pred CCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEE
Q 031608 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVD 136 (156)
Q Consensus 96 ~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd 136 (156)
+++++|+.||++|||+|++++|.++++.+. ++.++.+.
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~---~v~v~~~~ 122 (216)
T 1eej_A 85 QEKHVITVFTDITCGYCHKLHEQMADYNAL---GITVRYLA 122 (216)
T ss_dssp TCCEEEEEEECTTCHHHHHHHTTHHHHHHT---TEEEEEEE
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHhC---CcEEEEEE
Confidence 578999999999999999999999998763 35555543
No 233
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=98.66 E-value=1.7e-08 Score=79.19 Aligned_cols=73 Identities=8% Similarity=0.071 Sum_probs=55.8
Q ss_pred cchhccccCCCCCCCc--cceEecCChhhHHHHHHHhhcCCCcEEEEEe-CCCChhHHhhhHHHHHHHHHhcC-CeEEEE
Q 031608 59 DVRVEALWPDLSRPTS--VELEPINDSDHLDQILLRAQELSQPILIDWM-ASWCRKCIYLKPKLEKLAAEFDT-KLKFYY 134 (156)
Q Consensus 59 ~~~~~~~~~~~~~p~~--~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~-A~WC~~Ck~~~p~l~~la~~~~~-~v~~~~ 134 (156)
.+.++..+|+|.++.. .+...+... +| .||++||+|| ++||++|..+.|.|.+++++|.+ ++.++.
T Consensus 61 ~l~vG~~aPdF~l~~l~d~~G~~vsLs-d~---------kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~ 130 (254)
T 3tjj_A 61 KAKISKPAPYWEGTAVIDGEFKELKLT-DY---------RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVA 130 (254)
T ss_dssp CCCTTSBCCCCEEEEEETTEEEEEEGG-GG---------TTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEE
T ss_pred ccCCCCCCCCcEeeeecCCCCcEEeHH-HH---------CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEE
Confidence 4556777888876643 123344322 33 5899999999 99999999999999999999964 699999
Q ss_pred EECCCCH
Q 031608 135 VDVNKVS 141 (156)
Q Consensus 135 vd~d~~~ 141 (156)
|++|...
T Consensus 131 IS~D~~~ 137 (254)
T 3tjj_A 131 CSVDSQF 137 (254)
T ss_dssp EESSCHH
T ss_pred EcCCCHH
Confidence 9998643
No 234
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.65 E-value=5.8e-08 Score=68.49 Aligned_cols=61 Identities=11% Similarity=0.285 Sum_probs=44.8
Q ss_pred ChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCC---HH----HHHHhCCcccee
Q 031608 82 DSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKV---SK----DLVKRGNISVSI 154 (156)
Q Consensus 82 ~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~---~~----l~~~~~i~sv~~ 154 (156)
..+.+++++. .+ .++| |+++||++|+++.+.|+++. +.+..+|++.. ++ +++.+|+.++|+
T Consensus 16 ~~~~~~~~i~----~~-~vvv-f~~~~Cp~C~~~~~~L~~~~------i~~~~vdid~~~~~~~~~~~l~~~~g~~~vP~ 83 (130)
T 2cq9_A 16 PVNQIQETIS----DN-CVVI-FSKTSCSYCTMAKKLFHDMN------VNYKVVELDLLEYGNQFQDALYKMTGERTVPR 83 (130)
T ss_dssp HHHHHHHHHH----HS-SEEE-EECSSCSHHHHHHHHHHHHT------CCCEEEETTTSTTHHHHHHHHHHHHSSCCSSE
T ss_pred HHHHHHHHHc----CC-cEEE-EEcCCChHHHHHHHHHHHcC------CCcEEEECcCCcCcHHHHHHHHHHhCCCCcCE
Confidence 3456777774 23 4444 99999999999999998863 45566777655 43 778899999986
No 235
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=98.62 E-value=2.3e-08 Score=78.42 Aligned_cols=70 Identities=14% Similarity=0.230 Sum_probs=51.9
Q ss_pred chhccccCCCCCCCccceEecCChhhH-HHHHHHhhcCCCc-EEEEEeCCCChhHHhhhHHHHHHHHHhcC-CeEEEEEE
Q 031608 60 VRVEALWPDLSRPTSVELEPINDSDHL-DQILLRAQELSQP-ILIDWMASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVD 136 (156)
Q Consensus 60 ~~~~~~~~~~~~p~~~~~~~i~~~~~~-~~~l~~a~~~~k~-vlV~F~A~WC~~Ck~~~p~l~~la~~~~~-~v~~~~vd 136 (156)
+.++..+|+|.+++..+ .++ + .+.+ ..|++ ||++|||+||++|..+.|.|.+++++|.+ ++.++.|+
T Consensus 5 ~~iG~~aPdF~l~~~~G--~v~----l~~d~l----~~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS 74 (249)
T 3a2v_A 5 PLIGERFPEMEVTTDHG--VIK----LPDHYV----SQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLS 74 (249)
T ss_dssp CCTTSBCCCEEEEETTE--EEE----ETHHHH----TTTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEE
T ss_pred CCCCCCCCCeEEEcCCC--CEe----cHHHHh----hCCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEE
Confidence 35667777777665433 332 2 3333 25786 56688999999999999999999999864 69999999
Q ss_pred CCC
Q 031608 137 VNK 139 (156)
Q Consensus 137 ~d~ 139 (156)
+|.
T Consensus 75 ~Ds 77 (249)
T 3a2v_A 75 VDS 77 (249)
T ss_dssp SSC
T ss_pred CCC
Confidence 975
No 236
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=98.61 E-value=6.8e-08 Score=71.74 Aligned_cols=44 Identities=16% Similarity=0.295 Sum_probs=40.7
Q ss_pred CCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCC
Q 031608 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNK 139 (156)
Q Consensus 96 ~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~ 139 (156)
.++++|+.||++|||+|+.+.|.++++.+++++++.|..++++-
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~~~~~ 67 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQDVVLKQVPIAF 67 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEEEEECCS
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCCCeEEEEEeccc
Confidence 47899999999999999999999999999998789999999863
No 237
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=98.58 E-value=1.5e-08 Score=69.76 Aligned_cols=54 Identities=15% Similarity=0.124 Sum_probs=41.5
Q ss_pred CcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCH-------HHHHHhCCcccee
Q 031608 98 QPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVS-------KDLVKRGNISVSI 154 (156)
Q Consensus 98 k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~-------~l~~~~~i~sv~~ 154 (156)
...++.|+++|||+|+++.+.|+++...++ + +..+|++.++ ++++.+|+.++|+
T Consensus 18 ~~~vv~f~~~~Cp~C~~~~~~L~~~~~~~~-~--~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~ 78 (114)
T 2hze_A 18 NNKVTIFVKYTCPFCRNALDILNKFSFKRG-A--YEIVDIKEFKPENELRDYFEQITGGKTVPR 78 (114)
T ss_dssp TTCEEEEECTTCHHHHHHHHHHTTSCBCTT-S--EEEEEGGGSSSHHHHHHHHHHHHSCCSSCE
T ss_pred cCCEEEEEeCCChhHHHHHHHHHHcCCCcC-c--eEEEEccCCCChHHHHHHHHHHhCCCCcCE
Confidence 445777999999999999999887532221 1 7778887664 7788899999985
No 238
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=98.57 E-value=1.2e-07 Score=68.42 Aligned_cols=62 Identities=11% Similarity=0.279 Sum_probs=45.4
Q ss_pred CChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCC---HH----HHHHhCCccce
Q 031608 81 NDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKV---SK----DLVKRGNISVS 153 (156)
Q Consensus 81 ~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~---~~----l~~~~~i~sv~ 153 (156)
...+.+++++. .+ .++| |+++||++|+++.+.|+++. +.+..+|++.. ++ +++.+|+.++|
T Consensus 37 ~~~~~~~~~i~----~~-~Vvv-f~~~~Cp~C~~~k~~L~~~~------i~~~~vdId~~~~~~~~~~~L~~~~g~~tvP 104 (146)
T 2ht9_A 37 APVNQIQETIS----DN-CVVI-FSKTSCSYCTMAKKLFHDMN------VNYKVVELDLLEYGNQFQDALYKMTGERTVP 104 (146)
T ss_dssp CCHHHHHHHHH----HC-SEEE-EECTTCHHHHHHHHHHHHHT------CCCEEEEGGGCTTHHHHHHHHHHHHSCCCSC
T ss_pred HHHHHHHHHhc----CC-CEEE-EECCCChhHHHHHHHHHHcC------CCeEEEECccCcCCHHHHHHHHHHhCCCCcC
Confidence 34567888774 23 4444 99999999999999998863 44556677644 43 77889999998
Q ss_pred e
Q 031608 154 I 154 (156)
Q Consensus 154 ~ 154 (156)
+
T Consensus 105 ~ 105 (146)
T 2ht9_A 105 R 105 (146)
T ss_dssp E
T ss_pred e
Confidence 6
No 239
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=98.57 E-value=6.5e-08 Score=74.92 Aligned_cols=69 Identities=9% Similarity=0.205 Sum_probs=52.4
Q ss_pred chhccccCCCCCCCccceEecCChhhHHHHHHHhhcCCC-cEEEEEe-CCCChhHHhhhHHHHHHHHHhcC-CeEEEEEE
Q 031608 60 VRVEALWPDLSRPTSVELEPINDSDHLDQILLRAQELSQ-PILIDWM-ASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVD 136 (156)
Q Consensus 60 ~~~~~~~~~~~~p~~~~~~~i~~~~~~~~~l~~a~~~~k-~vlV~F~-A~WC~~Ck~~~p~l~~la~~~~~-~v~~~~vd 136 (156)
+.++..+|+|.+++... .+ .+.+.. |+ ++|+.|| |+||++|..+.|.|.++++++.+ ++.++.|+
T Consensus 3 l~iG~~aPdF~l~~~~G--~v----~l~d~~------Gk~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~v~vigIS 70 (233)
T 2v2g_A 3 ITLGEVFPNFEADSTIG--KL----KFHDWL------GNSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALS 70 (233)
T ss_dssp CCTTCBCCCCEEEETTC--CE----EHHHHH------CSSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTTEEEEEEE
T ss_pred CCCCCCCCCcEEecCCC--CE----EHHHHC------CCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcCCEEEEEc
Confidence 34566777777665433 33 233333 55 8999998 99999999999999999998864 69999999
Q ss_pred CCCC
Q 031608 137 VNKV 140 (156)
Q Consensus 137 ~d~~ 140 (156)
+|..
T Consensus 71 ~D~~ 74 (233)
T 2v2g_A 71 CDNV 74 (233)
T ss_dssp SSCH
T ss_pred CCCH
Confidence 9864
No 240
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=98.52 E-value=9.8e-08 Score=73.07 Aligned_cols=69 Identities=17% Similarity=0.258 Sum_probs=50.8
Q ss_pred chhccccCCCCCCCc--cceEecCChhhHHHHHHHhhcCCC--cEEEEEeCCCChhHHhhhHHHHHHHHHhcC-CeEEEE
Q 031608 60 VRVEALWPDLSRPTS--VELEPINDSDHLDQILLRAQELSQ--PILIDWMASWCRKCIYLKPKLEKLAAEFDT-KLKFYY 134 (156)
Q Consensus 60 ~~~~~~~~~~~~p~~--~~~~~i~~~~~~~~~l~~a~~~~k--~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~-~v~~~~ 134 (156)
+.++..+|+|.+++. .. .++ +.+. .|+ .+|+.|||+||++|..+.|.|.+++++|.+ ++.++.
T Consensus 3 l~iG~~aP~F~l~~~~~~G--~v~----l~d~------~Gk~~vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~ 70 (220)
T 1xcc_A 3 YHLGATFPNFTAKASGIDG--DFE----LYKY------IENSWAILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIG 70 (220)
T ss_dssp CCTTCBCCCCEECBTTCSS--CEE----HHHH------TTTSEEEEECCSCTTCHHHHHHHHHHHHTHHHHHTTTEEEEE
T ss_pred CCCCCCCCCcEeecccCCC--cEe----HHHH------cCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHcCCEEEE
Confidence 346677788877654 32 332 2222 366 555666999999999999999999999965 699999
Q ss_pred EECCCC
Q 031608 135 VDVNKV 140 (156)
Q Consensus 135 vd~d~~ 140 (156)
|++|..
T Consensus 71 vS~D~~ 76 (220)
T 1xcc_A 71 FSCNSK 76 (220)
T ss_dssp EESSCH
T ss_pred EeCCCH
Confidence 999863
No 241
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=98.48 E-value=1.9e-07 Score=69.80 Aligned_cols=45 Identities=20% Similarity=0.380 Sum_probs=41.1
Q ss_pred CCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCC
Q 031608 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKV 140 (156)
Q Consensus 96 ~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~ 140 (156)
.++++||.|++.|||+|+.+.|.++++.+++++++.|..++++-.
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~~v~~~~~p~~~~ 67 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKDDMYLRTEHVVWQ 67 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCTTEEEEEEECCCS
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCCCeEEEEecCCCC
Confidence 478999999999999999999999999999988899999998643
No 242
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.44 E-value=2.1e-07 Score=70.61 Aligned_cols=37 Identities=16% Similarity=0.354 Sum_probs=30.3
Q ss_pred CCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEE
Q 031608 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYV 135 (156)
Q Consensus 96 ~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~v 135 (156)
+++++|+.||++|||+|++++|.++++.+. ++.+..+
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~~---~v~v~~~ 121 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYNDL---GITVRYL 121 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHHT---TEEEEEE
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHhC---CcEEEEE
Confidence 578899999999999999999999997652 3555544
No 243
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=98.43 E-value=9.2e-08 Score=66.40 Aligned_cols=63 Identities=16% Similarity=0.275 Sum_probs=45.5
Q ss_pred hhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhh-hHHHHHHHHHhcCCeEEEEEECCCCH-------HHHHHhCCcccee
Q 031608 83 SDHLDQILLRAQELSQPILIDWMASWCRKCIYL-KPKLEKLAAEFDTKLKFYYVDVNKVS-------KDLVKRGNISVSI 154 (156)
Q Consensus 83 ~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~-~p~l~~la~~~~~~v~~~~vd~d~~~-------~l~~~~~i~sv~~ 154 (156)
.+.+++++. ..+ ++.|+++|||+|++. .+.|+++.. ..+.+..+|++.++ ++.+.+|+.++|+
T Consensus 15 ~~~~~~~i~----~~~--Vvvf~~~~Cp~C~~alk~~L~~~~~---~~i~~~~vdid~~~~~~~~~~~l~~~~g~~tvP~ 85 (118)
T 3c1r_A 15 IKHVKDLIA----ENE--IFVASKTYCPYCHAALNTLFEKLKV---PRSKVLVLQLNDMKEGADIQAALYEINGQRTVPN 85 (118)
T ss_dssp HHHHHHHHH----HSS--EEEEECSSCHHHHHHHHHHHTTSCC---CGGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCE
T ss_pred HHHHHHHHc----cCc--EEEEEcCCCcCHHHHHHHHHHHcCC---CCCCeEEEECccCCChHHHHHHHHHHhCCCCcCE
Confidence 345666663 233 555999999999999 888876541 23778888887653 5778899999985
No 244
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=98.41 E-value=6.1e-07 Score=60.65 Aligned_cols=59 Identities=8% Similarity=0.116 Sum_probs=43.2
Q ss_pred hhHHHHHHHhhcCCCcEEEEEeC-----CCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHH----HHHhCCcccee
Q 031608 84 DHLDQILLRAQELSQPILIDWMA-----SWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKD----LVKRGNISVSI 154 (156)
Q Consensus 84 ~~~~~~l~~a~~~~k~vlV~F~A-----~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l----~~~~~i~sv~~ 154 (156)
+.+++++ ..+ +|+| |++ +|||+|++..+.|+++ ++.+..+|+++++++ ...+|+.++|+
T Consensus 8 ~~~~~~i----~~~-~vvv-f~~g~~~~~~C~~C~~~~~~L~~~------~i~~~~vdi~~~~~~~~~l~~~~g~~~vP~ 75 (105)
T 2yan_A 8 ERLKVLT----NKA-SVML-FMKGNKQEAKCGFSKQILEILNST------GVEYETFDILEDEEVRQGLKAYSNWPTYPQ 75 (105)
T ss_dssp HHHHHHH----TSS-SEEE-EESBCSSSBCTTHHHHHHHHHHHH------TCCCEEEEGGGCHHHHHHHHHHHTCCSSCE
T ss_pred HHHHHHh----ccC-CEEE-EEecCCCCCCCccHHHHHHHHHHC------CCCeEEEECCCCHHHHHHHHHHHCCCCCCe
Confidence 3455555 333 4555 777 9999999999999876 267888999887764 44578888875
No 245
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.38 E-value=6e-07 Score=66.37 Aligned_cols=43 Identities=9% Similarity=0.257 Sum_probs=39.2
Q ss_pred CCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECC
Q 031608 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVN 138 (156)
Q Consensus 96 ~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d 138 (156)
+++++|+.||+.|||+|+.+.|.+.++.+++++++.|..+.+.
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~~ 66 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPADVHFVRLPAL 66 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEEEEECC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCCCeEEEEEehh
Confidence 4789999999999999999999999999999878888888774
No 246
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=98.34 E-value=4.1e-07 Score=70.25 Aligned_cols=78 Identities=13% Similarity=0.060 Sum_probs=56.2
Q ss_pred ccchhccccCCCCCCCccceEecCChhhHHHHHHHhhcCCCcEEEEEeCCC-ChhHH-----hhhHHHHHHHHHhcCCeE
Q 031608 58 RDVRVEALWPDLSRPTSVELEPINDSDHLDQILLRAQELSQPILIDWMASW-CRKCI-----YLKPKLEKLAAEFDTKLK 131 (156)
Q Consensus 58 r~~~~~~~~~~~~~p~~~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~W-C~~Ck-----~~~p~l~~la~~~~~~v~ 131 (156)
..+.++..+|+|.++.. ....+... +| .|+++||+||++| |++|. .+.|.|.++ + .++.
T Consensus 20 ~~l~vG~~APdFtL~d~-~G~~vsLs-d~---------~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~-~gv~ 84 (224)
T 3keb_A 20 DFPRKGDYLPSFMLVDD-QKHDAALE-SF---------SHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---W-PHLK 84 (224)
T ss_dssp CCCCTTCBCCCCEEEET-TSCEEEGG-GG---------TTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---C-TTSE
T ss_pred CcCCCCCCCCCeEEECC-CCCEEeHH-Hh---------CCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---c-CCCE
Confidence 34667888889988754 23344323 23 5899999999999 99999 888888877 5 4589
Q ss_pred EEEEECCCC---HHHHHHhCCc
Q 031608 132 FYYVDVNKV---SKDLVKRGNI 150 (156)
Q Consensus 132 ~~~vd~d~~---~~l~~~~~i~ 150 (156)
++.|+.|.. ...++++++.
T Consensus 85 VvgIS~Ds~~~~~~f~~~~gl~ 106 (224)
T 3keb_A 85 LIVITVDSPSSLARARHEHGLP 106 (224)
T ss_dssp EEEEESSCHHHHHHHHHHHCCT
T ss_pred EEEEECCCHHHHHHHHHHcCCC
Confidence 999998752 3445566663
No 247
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=98.33 E-value=3e-07 Score=68.49 Aligned_cols=44 Identities=9% Similarity=0.372 Sum_probs=38.4
Q ss_pred CCCcEEEEEeCCCChhHHhhhHHH---HHHHHHhcCCeEEEEEECCC
Q 031608 96 LSQPILIDWMASWCRKCIYLKPKL---EKLAAEFDTKLKFYYVDVNK 139 (156)
Q Consensus 96 ~~k~vlV~F~A~WC~~Ck~~~p~l---~~la~~~~~~v~~~~vd~d~ 139 (156)
.++++||.|++.|||+|+.+.|.+ +++.+.+++++.|+.+++.-
T Consensus 13 ~~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 59 (189)
T 3l9v_A 13 VDAPAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQGSRMVKYHVSL 59 (189)
T ss_dssp TTCCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCTTCCEEEEECSS
T ss_pred CCCCEEEEEECCCChhHHHHhHhccchHHHHHhCCCCCEEEEEechh
Confidence 357899999999999999999987 68888888779999998864
No 248
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=98.32 E-value=1.4e-06 Score=58.70 Aligned_cols=52 Identities=13% Similarity=0.112 Sum_probs=41.0
Q ss_pred CCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHh-----CCcccee
Q 031608 97 SQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKR-----GNISVSI 154 (156)
Q Consensus 97 ~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~-----~i~sv~~ 154 (156)
.+.-++.|+++||+.|++.++.|+++ ++.+..+|++.+++...++ |..++|+
T Consensus 14 ~~~~v~vy~~~~Cp~C~~ak~~L~~~------~i~y~~idI~~~~~~~~~l~~~~~g~~~vP~ 70 (99)
T 3qmx_A 14 VSAKIEIYTWSTCPFCMRALALLKRK------GVEFQEYCIDGDNEAREAMAARANGKRSLPQ 70 (99)
T ss_dssp CCCCEEEEECTTCHHHHHHHHHHHHH------TCCCEEEECTTCHHHHHHHHHHTTTCCCSCE
T ss_pred CCCCEEEEEcCCChhHHHHHHHHHHC------CCCCEEEEcCCCHHHHHHHHHHhCCCCCCCE
Confidence 44456679999999999999999875 3667889998887665544 8888875
No 249
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=98.31 E-value=4.7e-07 Score=59.04 Aligned_cols=49 Identities=16% Similarity=0.249 Sum_probs=40.2
Q ss_pred EEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECC--CCHHHHHHh-CCcccee
Q 031608 100 ILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVN--KVSKDLVKR-GNISVSI 154 (156)
Q Consensus 100 vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d--~~~~l~~~~-~i~sv~~ 154 (156)
.++.|+++||++|++..+.|++. ++.+..+|++ ..+++.+.+ ++.++|+
T Consensus 7 ~v~~y~~~~C~~C~~~~~~L~~~------~i~~~~vdv~~~~~~~l~~~~~~~~~vP~ 58 (89)
T 2klx_A 7 EIILYTRPNCPYCKRARDLLDKK------GVKYTDIDASTSLRQEMVQRANGRNTFPQ 58 (89)
T ss_dssp CEEEESCSCCTTTHHHHHHHHHH------TCCEEEECSCHHHHHHHHHHHHSSCCSCE
T ss_pred eEEEEECCCChhHHHHHHHHHHc------CCCcEEEECCHHHHHHHHHHhCCCCCcCE
Confidence 36779999999999999999875 2567788888 556778888 9999886
No 250
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=98.26 E-value=1.4e-06 Score=66.93 Aligned_cols=70 Identities=6% Similarity=0.152 Sum_probs=57.5
Q ss_pred chhccccCCCCCCCc--cceEecCChhhHHHHHHHhhcCCCcEEEEEe-CCCChhHHhhhHHHHHHHHHhcC-CeEEEEE
Q 031608 60 VRVEALWPDLSRPTS--VELEPINDSDHLDQILLRAQELSQPILIDWM-ASWCRKCIYLKPKLEKLAAEFDT-KLKFYYV 135 (156)
Q Consensus 60 ~~~~~~~~~~~~p~~--~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~-A~WC~~Ck~~~p~l~~la~~~~~-~v~~~~v 135 (156)
+.++..+|+|.++.. ....++... +| .||++|+.|| ++||+.|..+.+.|.+.+.++.. ++.++.|
T Consensus 23 ~~VG~~APdF~l~a~~d~~~~~vsLs-d~---------~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~g~~vigi 92 (216)
T 3sbc_A 23 AQVQKQAPTFKKTAVVDGVFDEVSLD-KY---------KGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFA 92 (216)
T ss_dssp CCTTSBCCCCCEEEEETTEEEEECGG-GG---------TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHTTEEEEEE
T ss_pred hhcCCcCCCCCCcceECCCCcEEehH-Hh---------CCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccCCceEEEe
Confidence 578899999998743 234566544 34 5899999999 99999999999999999999864 6999999
Q ss_pred ECCC
Q 031608 136 DVNK 139 (156)
Q Consensus 136 d~d~ 139 (156)
++|.
T Consensus 93 S~Ds 96 (216)
T 3sbc_A 93 STDS 96 (216)
T ss_dssp ESSC
T ss_pred ecCc
Confidence 9986
No 251
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=98.21 E-value=2.3e-06 Score=55.84 Aligned_cols=49 Identities=16% Similarity=0.211 Sum_probs=38.6
Q ss_pred EEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHH----HHHhCCcccee
Q 031608 100 ILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKD----LVKRGNISVSI 154 (156)
Q Consensus 100 vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l----~~~~~i~sv~~ 154 (156)
.++.|+++||++|++..+.+++. ++.+..+|++++++. .+.+++.++|+
T Consensus 7 ~v~ly~~~~C~~C~~~~~~L~~~------~i~~~~~di~~~~~~~~~l~~~~~~~~vP~ 59 (92)
T 2khp_A 7 DVIIYTRPGCPYCARAKALLARK------GAEFNEIDASATPELRAEMQERSGRNTFPQ 59 (92)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHT------TCCCEEEESTTSHHHHHHHHHHHTSSCCCE
T ss_pred cEEEEECCCChhHHHHHHHHHHc------CCCcEEEECCCCHHHHHHHHHHhCCCCcCE
Confidence 36779999999999999988864 367888899876544 44788888885
No 252
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=98.20 E-value=2e-06 Score=58.61 Aligned_cols=60 Identities=13% Similarity=0.361 Sum_probs=40.5
Q ss_pred hhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCC----HH----HHHHhCCcccee
Q 031608 83 SDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKV----SK----DLVKRGNISVSI 154 (156)
Q Consensus 83 ~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~----~~----l~~~~~i~sv~~ 154 (156)
.+.+++++. .++ ++.|+++|||+|++..+.|+++. +.+..+|++.. ++ +.+..|+.++|+
T Consensus 9 ~~~~~~~i~----~~~--v~vy~~~~Cp~C~~~~~~L~~~~------i~~~~~di~~~~~~~~~~~~~l~~~~g~~tvP~ 76 (113)
T 3rhb_A 9 EESIRKTVT----ENT--VVIYSKTWCSYCTEVKTLFKRLG------VQPLVVELDQLGPQGPQLQKVLERLTGQHTVPN 76 (113)
T ss_dssp HHHHHHHHH----HSS--EEEEECTTCHHHHHHHHHHHHTT------CCCEEEEGGGSTTHHHHHHHHHHHHHSCCSSCE
T ss_pred HHHHHHHHh----cCC--EEEEECCCChhHHHHHHHHHHcC------CCCeEEEeecCCCChHHHHHHHHHHhCCCCcCE
Confidence 345555553 344 56699999999999999998752 44556677642 33 344468888875
No 253
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=98.19 E-value=2.2e-06 Score=66.27 Aligned_cols=40 Identities=13% Similarity=0.191 Sum_probs=33.3
Q ss_pred CCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEEC
Q 031608 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDV 137 (156)
Q Consensus 96 ~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~ 137 (156)
+++.+|+.|+.+|||+|+++.|.++++.+. ++|.+..+++
T Consensus 96 ~ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~--g~v~v~~~~~ 135 (241)
T 1v58_A 96 DAPVIVYVFADPFCPYCKQFWQQARPWVDS--GKVQLRTLLV 135 (241)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHT--TSEEEEEEEC
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHhC--CcEEEEEEEC
Confidence 467799999999999999999999998765 3577776655
No 254
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=98.18 E-value=3e-06 Score=53.85 Aligned_cols=48 Identities=15% Similarity=0.217 Sum_probs=37.6
Q ss_pred EEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHH----HHHHhCCcccee
Q 031608 101 LIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSK----DLVKRGNISVSI 154 (156)
Q Consensus 101 lV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~----l~~~~~i~sv~~ 154 (156)
++.|+++||++|++..+.+++. ++.+..+|++++++ +.+.+++.++|+
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~------~i~~~~~~i~~~~~~~~~~~~~~~~~~vP~ 54 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSK------GVSFQELPIDGNAAKREEMIKRSGRTTVPQ 54 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH------TCCCEEEECTTCSHHHHHHHHHHSSCCSCE
T ss_pred EEEEECCCChhHHHHHHHHHHC------CCCcEEEECCCCHHHHHHHHHHhCCCCcCE
Confidence 5679999999999999999874 26677788876543 456788888886
No 255
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=98.08 E-value=2.5e-06 Score=63.36 Aligned_cols=40 Identities=13% Similarity=0.177 Sum_probs=36.4
Q ss_pred CCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECC
Q 031608 97 SQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVN 138 (156)
Q Consensus 97 ~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d 138 (156)
++++||.|+..|||+|+++.|.++++.+++ ++.|..+.+.
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~--~v~~~~~p~~ 61 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNMENFLPVISQEA--GTDIGKMHIT 61 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHGGGHHHHHHHH--TSCCEEEECC
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHHh--CCeEEEEecc
Confidence 689999999999999999999999999998 4788888875
No 256
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=98.06 E-value=3e-06 Score=58.19 Aligned_cols=60 Identities=13% Similarity=0.187 Sum_probs=41.5
Q ss_pred hhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCC--C-----HHHHHHhCCcccee
Q 031608 83 SDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNK--V-----SKDLVKRGNISVSI 154 (156)
Q Consensus 83 ~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~--~-----~~l~~~~~i~sv~~ 154 (156)
.+.+++++. .++ | +.|+++|||.|++.++.|+++ ++.+-.+|++. + ..+.+..|..++|+
T Consensus 7 ~~~~~~~i~----~~~-v-~vy~~~~Cp~C~~ak~~L~~~------~i~~~~~dvd~~~~~~~~~~~l~~~~g~~tvP~ 73 (114)
T 3h8q_A 7 RRHLVGLIE----RSR-V-VIFSKSYCPHSTRVKELFSSL------GVECNVLELDQVDDGARVQEVLSEITNQKTVPN 73 (114)
T ss_dssp HHHHHHHHH----HCS-E-EEEECTTCHHHHHHHHHHHHT------TCCCEEEETTTSTTHHHHHHHHHHHHSCCSSCE
T ss_pred HHHHHHHhc----cCC-E-EEEEcCCCCcHHHHHHHHHHc------CCCcEEEEecCCCChHHHHHHHHHHhCCCccCE
Confidence 456777773 344 3 339999999999999999875 25566677764 3 23456678888875
No 257
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=98.05 E-value=4e-06 Score=61.89 Aligned_cols=43 Identities=16% Similarity=0.318 Sum_probs=38.9
Q ss_pred CCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECC
Q 031608 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVN 138 (156)
Q Consensus 96 ~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d 138 (156)
+++++|+.||..|||+|+.+.|.+.++.+++++++.|..+.+.
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~~ 63 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPSDAYLRTEHVV 63 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCTTEEEEEEECC
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCCCceEEEEeccc
Confidence 4788999999999999999999999999999877888888874
No 258
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=97.99 E-value=5.3e-05 Score=57.51 Aligned_cols=69 Identities=14% Similarity=-0.007 Sum_probs=56.5
Q ss_pred eEecCChhhHHHHHHHhhcCCCc-EEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCC--CHHHHHHhCCc
Q 031608 77 LEPINDSDHLDQILLRAQELSQP-ILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNK--VSKDLVKRGNI 150 (156)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~-vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~--~~~l~~~~~i~ 150 (156)
+.++ +.+++.+++. .+.+ +++.|..+||++|..+.+.|+++++++.+++.|+.+|.++ +..++..+|+.
T Consensus 115 v~e~-t~~n~~~~~~----~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~~i~F~~vd~~~~~~~~~l~~fgl~ 186 (227)
T 4f9z_D 115 VTEY-NPVTVIGLFN----SVIQIHLLLIMNKASPEYEENMHRYQKAAKLFQGKILFILVDSGMKENGKVISFFKLK 186 (227)
T ss_dssp EEEC-CHHHHHHHHH----SSCCEEEEEEECTTSTTHHHHHHHHHHHHHHTTTTCEEEEEETTSGGGHHHHHHTTCC
T ss_pred eeec-CcccHHHHhc----cCCceEEEEEEcCCcchHHHHHHHHHHHHHHhhCCEEEEEeCCccHhHHHHHHHcCCC
Confidence 4455 4668888874 4544 4456778899999999999999999999889999999974 77889999997
No 259
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=97.99 E-value=4.7e-06 Score=54.36 Aligned_cols=48 Identities=19% Similarity=0.252 Sum_probs=36.4
Q ss_pred EEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECC-----CC----HHHHHHhCCcccee
Q 031608 101 LIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVN-----KV----SKDLVKRGNISVSI 154 (156)
Q Consensus 101 lV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d-----~~----~~l~~~~~i~sv~~ 154 (156)
++.|+++||++|++..+.|+++. +.+-.+|++ +. +++.+.+++.++|+
T Consensus 14 v~ly~~~~Cp~C~~~~~~L~~~g------i~~~~~~v~~~~~~~~~~~~~~l~~~~g~~~vP~ 70 (92)
T 3ic4_A 14 VLMYGLSTCPHCKRTLEFLKREG------VDFEVIWIDKLEGEERKKVIEKVHSISGSYSVPV 70 (92)
T ss_dssp SEEEECTTCHHHHHHHHHHHHHT------CCCEEEEGGGCCHHHHHHHHHHHHHHHSSSCSCE
T ss_pred EEEEECCCChHHHHHHHHHHHcC------CCcEEEEeeeCCccchHHHHHHHHHhcCCCCcCE
Confidence 56699999999999999998863 344456665 23 56677889998886
No 260
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=97.96 E-value=4e-05 Score=53.69 Aligned_cols=64 Identities=14% Similarity=0.133 Sum_probs=54.6
Q ss_pred ceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCc
Q 031608 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNI 150 (156)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~ 150 (156)
....|++.+++++++. .+++++|-|+++||++| .+.|.++|+.+ +.+.|+.++ +++++.++++.
T Consensus 22 ~~~~i~s~~e~e~fi~----~~~v~VVGfF~~~~~~~---~~~F~~~A~~~-~d~~F~~t~---~~~v~~~~~v~ 85 (124)
T 2l4c_A 22 EPTWLTDVPAAMEFIA----ATEVAVIGFFQDLEIPA---VPILHSMVQKF-PGVSFGIST---DSEVLTHYNIT 85 (124)
T ss_dssp CCEECCSHHHHHHHHH----TSSEEEEEECSCTTSTH---HHHHHHHHHHC-TTSEEEEEC---CHHHHHHTTCC
T ss_pred cceEcCCHHHHHHHHh----cCCCEEEEEECCCCChh---HHHHHHHHHhC-CCceEEEEC---hHHHHHHcCCC
Confidence 4566888899999994 68899999999999999 67899999999 568888774 37899999987
No 261
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=97.96 E-value=1.8e-05 Score=58.84 Aligned_cols=54 Identities=11% Similarity=0.177 Sum_probs=41.7
Q ss_pred CCCc-EEEEEeCCCChhHHh-hhHHHHHHHHHhcC-Ce-EEEEEECCC---CHHHHHHhCC
Q 031608 96 LSQP-ILIDWMASWCRKCIY-LKPKLEKLAAEFDT-KL-KFYYVDVNK---VSKDLVKRGN 149 (156)
Q Consensus 96 ~~k~-vlV~F~A~WC~~Ck~-~~p~l~~la~~~~~-~v-~~~~vd~d~---~~~l~~~~~i 149 (156)
.||+ ||+.|++.|||.|.. +.|.|.+.++++.. ++ .++.|..|. ....++++++
T Consensus 46 ~Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g~d~VigIS~D~~~~~~~f~~~~~l 106 (176)
T 4f82_A 46 AGKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAGIDEIWCVSVNDAFVMGAWGRDLHT 106 (176)
T ss_dssp TTCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTC
T ss_pred CCCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCCCEEEEEeCCCHHHHHHHHHHhCC
Confidence 3664 566788999999999 99999999999864 58 899999986 2344455554
No 262
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=97.94 E-value=2.1e-06 Score=60.50 Aligned_cols=64 Identities=13% Similarity=0.209 Sum_probs=43.6
Q ss_pred ChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhh-hHHHHHHHHHhcCCeEEEEEECCCC-------HHHHHHhCCccce
Q 031608 82 DSDHLDQILLRAQELSQPILIDWMASWCRKCIYL-KPKLEKLAAEFDTKLKFYYVDVNKV-------SKDLVKRGNISVS 153 (156)
Q Consensus 82 ~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~-~p~l~~la~~~~~~v~~~~vd~d~~-------~~l~~~~~i~sv~ 153 (156)
..+.+++++. .++ ++.|+++|||.|++. ++.|+++... .+.+..+|++.. .++.+.+|..+||
T Consensus 26 ~~~~v~~~i~----~~~--Vvvy~~~~Cp~C~~a~k~~L~~~~~~---~i~~~~vdvd~~~~~~~~~~~L~~~~g~~tVP 96 (129)
T 3ctg_A 26 TVAHVKDLIG----QKE--VFVAAKTYCPYCKATLSTLFQELNVP---KSKALVLELDEMSNGSEIQDALEEISGQKTVP 96 (129)
T ss_dssp HHHHHHHHHH----HSS--EEEEECTTCHHHHHHHHHHHTTSCCC---GGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSC
T ss_pred HHHHHHHHHc----CCC--EEEEECCCCCchHHHHHHHHHhcCcc---CCCcEEEEccccCCHHHHHHHHHHHhCCCCCC
Confidence 3456666664 233 567999999999999 8888775421 144555565533 3577788998888
Q ss_pred e
Q 031608 154 I 154 (156)
Q Consensus 154 ~ 154 (156)
+
T Consensus 97 ~ 97 (129)
T 3ctg_A 97 N 97 (129)
T ss_dssp E
T ss_pred E
Confidence 5
No 263
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=97.93 E-value=1.1e-05 Score=61.97 Aligned_cols=70 Identities=9% Similarity=0.180 Sum_probs=57.1
Q ss_pred cchhccccCCCC----CCCccceEecCChhhHHHHHHHhhcCCCcEEEEEe-CCCChhHHhhhHHHHHHHHHhcC-CeEE
Q 031608 59 DVRVEALWPDLS----RPTSVELEPINDSDHLDQILLRAQELSQPILIDWM-ASWCRKCIYLKPKLEKLAAEFDT-KLKF 132 (156)
Q Consensus 59 ~~~~~~~~~~~~----~p~~~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~-A~WC~~Ck~~~p~l~~la~~~~~-~v~~ 132 (156)
.+.++..+|+|. +|. .+..++... +| .||++|+.|| ++||+.|..+...|.+.+.+|.. ++.+
T Consensus 25 ~~~vG~~APdF~~~a~l~d-~~g~~vsLs-d~---------~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~g~~v 93 (219)
T 3tue_A 25 NAKINSPAPSFEEVALMPN-GSFKKISLS-SY---------KGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELNCEV 93 (219)
T ss_dssp CCCTTSBCCCCEEEEECTT-SCEEEEEGG-GG---------TTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTTTEEE
T ss_pred ccccCCcCCCCcccccccC-CCCcEEehH-Hh---------CCCEEEEEEecccCCCCCchhHhhHHHHHhhhccCCcEE
Confidence 467899999997 443 245556533 34 5899999999 99999999999999999999975 6999
Q ss_pred EEEECCC
Q 031608 133 YYVDVNK 139 (156)
Q Consensus 133 ~~vd~d~ 139 (156)
++|++|.
T Consensus 94 igiS~Ds 100 (219)
T 3tue_A 94 LACSIDS 100 (219)
T ss_dssp EEEESSC
T ss_pred EEeeCCc
Confidence 9999986
No 264
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=97.93 E-value=1.6e-05 Score=53.25 Aligned_cols=51 Identities=24% Similarity=0.279 Sum_probs=35.1
Q ss_pred CcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCC--C---HHHH----HHhCCcccee
Q 031608 98 QPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNK--V---SKDL----VKRGNISVSI 154 (156)
Q Consensus 98 k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~--~---~~l~----~~~~i~sv~~ 154 (156)
+..++.|+++|||+|++.++.|+++. +.+-.+|++. . +++. +..|+.+||+
T Consensus 21 ~~~v~ly~~~~Cp~C~~ak~~L~~~~------i~y~~vdI~~~~~~~~~~~~~~l~~~~g~~~vP~ 80 (103)
T 3nzn_A 21 RGKVIMYGLSTCVWCKKTKKLLTDLG------VDFDYVYVDRLEGKEEEEAVEEVRRFNPSVSFPT 80 (103)
T ss_dssp CSCEEEEECSSCHHHHHHHHHHHHHT------BCEEEEEGGGCCHHHHHHHHHHHHHHCTTCCSCE
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcC------CCcEEEEeeccCcccHHHHHHHHHHhCCCCccCE
Confidence 34466699999999999999998863 3455566653 1 2332 2358888886
No 265
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=97.93 E-value=1.8e-05 Score=58.08 Aligned_cols=43 Identities=16% Similarity=0.308 Sum_probs=38.3
Q ss_pred CCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECC
Q 031608 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVN 138 (156)
Q Consensus 96 ~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d 138 (156)
+++++|+.|+..|||+|+.+.|.+.++.++++++|.+..+.+.
T Consensus 24 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~~ 66 (193)
T 2rem_A 24 AGKIEVVEIFGYTCPHCAHFDSKLQAWGARQAKDVRFTLVPAV 66 (193)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTEEEEEEECC
T ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHhcCCceEEEEeCcc
Confidence 4677999999999999999999999999998877888888774
No 266
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=97.92 E-value=2.4e-05 Score=56.72 Aligned_cols=43 Identities=16% Similarity=0.183 Sum_probs=37.7
Q ss_pred CCCcEEEEEeCCCChhHHhhhHHHHHHHHHh--cCCeEEEEEECC
Q 031608 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEF--DTKLKFYYVDVN 138 (156)
Q Consensus 96 ~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~--~~~v~~~~vd~d 138 (156)
+++++|+.|+..|||+|+.+.|.+.++.++| ++++.++..++.
T Consensus 26 ~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 70 (175)
T 1z6m_A 26 NAPVKMIEFINVRCPYCRKWFEESEELLAQSVKSGKVERIIKLFD 70 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHHhhCCcEEEEEEeCC
Confidence 4788999999999999999999999998888 667888887764
No 267
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=97.89 E-value=3.1e-05 Score=52.51 Aligned_cols=59 Identities=8% Similarity=0.085 Sum_probs=42.5
Q ss_pred hhHHHHHHHhhcCCCcEEEEEeC-----CCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHH----HHHhCCcccee
Q 031608 84 DHLDQILLRAQELSQPILIDWMA-----SWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKD----LVKRGNISVSI 154 (156)
Q Consensus 84 ~~~~~~l~~a~~~~k~vlV~F~A-----~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l----~~~~~i~sv~~ 154 (156)
+.+++++ ..+ .|+| |+. +||++|++.++.|+++ ++.+..+|+++++++ ....|..++|+
T Consensus 6 ~~~~~~i----~~~-~vvv-y~~g~~~~~~Cp~C~~ak~~L~~~------~i~~~~vdi~~~~~~~~~l~~~~g~~~vP~ 73 (109)
T 1wik_A 6 SGLKVLT----NKA-SVML-FMKGNKQEAKCGFSKQILEILNST------GVEYETFDILEDEEVRQGLKTFSNWPTYPQ 73 (109)
T ss_dssp CCHHHHH----TTS-SEEE-EESSTTTCCCSSTHHHHHHHHHHT------CSCEEEEESSSCHHHHHHHHHHHSCCSSCE
T ss_pred HHHHHHh----ccC-CEEE-EEecCCCCCCCchHHHHHHHHHHc------CCCeEEEECCCCHHHHHHHHHHhCCCCCCE
Confidence 4577777 234 3444 666 9999999999999774 377889999887654 34467777764
No 268
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=97.87 E-value=1.8e-05 Score=52.78 Aligned_cols=48 Identities=27% Similarity=0.466 Sum_probs=38.0
Q ss_pred EEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHh-----CCcccee
Q 031608 101 LIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKR-----GNISVSI 154 (156)
Q Consensus 101 lV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~-----~i~sv~~ 154 (156)
|+.|+.+|||.|++.+..|++. ++.+-.+|++++++..+.+ |..+||+
T Consensus 6 I~vYs~~~Cp~C~~aK~~L~~~------gi~y~~idi~~d~~~~~~~~~~~~G~~tVP~ 58 (92)
T 2lqo_A 6 LTIYTTSWCGYCLRLKTALTAN------RIAYDEVDIEHNRAAAEFVGSVNGGNRTVPT 58 (92)
T ss_dssp EEEEECTTCSSHHHHHHHHHHT------TCCCEEEETTTCHHHHHHHHHHSSSSSCSCE
T ss_pred EEEEcCCCCHhHHHHHHHHHhc------CCceEEEEcCCCHHHHHHHHHHcCCCCEeCE
Confidence 5669999999999999888762 4788899999887665433 7778874
No 269
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=97.87 E-value=5.1e-06 Score=53.46 Aligned_cols=52 Identities=13% Similarity=0.188 Sum_probs=37.1
Q ss_pred cEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCC----HHHHHHhCC-----cccee
Q 031608 99 PILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKV----SKDLVKRGN-----ISVSI 154 (156)
Q Consensus 99 ~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~----~~l~~~~~i-----~sv~~ 154 (156)
..++.|+++||++|++..+.|+++. -.+.++.+|.++. .++.+.+|. .++|+
T Consensus 4 m~v~ly~~~~Cp~C~~~~~~L~~~~----i~~~~~~vd~~~~~~~~~el~~~~g~~~~~~~~vP~ 64 (89)
T 3msz_A 4 MKVKIYTRNGCPYCVWAKQWFEENN----IAFDETIIDDYAQRSKFYDEMNQSGKVIFPISTVPQ 64 (89)
T ss_dssp CCEEEEECTTCHHHHHHHHHHHHTT----CCCEEEECCSHHHHHHHHHHHHTTTCCSSCCCSSCE
T ss_pred eEEEEEEcCCChhHHHHHHHHHHcC----CCceEEEeecCCChhHHHHHHHHhCCCCCCCCccCE
Confidence 4577899999999999999887653 1255566666544 456677777 77775
No 270
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=97.81 E-value=1.8e-05 Score=59.00 Aligned_cols=43 Identities=14% Similarity=0.433 Sum_probs=37.4
Q ss_pred CCCcEEEEEeCCCChhHHhhhHHH---HHHHHHhcCCeEEEEEECC
Q 031608 96 LSQPILIDWMASWCRKCIYLKPKL---EKLAAEFDTKLKFYYVDVN 138 (156)
Q Consensus 96 ~~k~vlV~F~A~WC~~Ck~~~p~l---~~la~~~~~~v~~~~vd~d 138 (156)
.++++||.|+..|||+|+++.|.+ .++.+.+++++.|+.++..
T Consensus 20 ~~~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~~~v~~~~~~~~ 65 (191)
T 3l9s_A 20 AGEPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLPEGTKMTKYHVE 65 (191)
T ss_dssp CSSSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSCTTCCEEEEECS
T ss_pred CCCCeEEEEECCCChhHHHhChhccchHHHHHhCCCCcEEEEEecc
Confidence 468899999999999999999987 6999999877888877764
No 271
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=97.79 E-value=9.2e-05 Score=60.25 Aligned_cols=109 Identities=13% Similarity=0.007 Sum_probs=76.1
Q ss_pred ccCCccCCCCCccccccCCceEEEeCCCccccccccchhccccCCCCCCCccceEecCChhhHHHHHHHhhcCCCcEEEE
Q 031608 24 FQQPWSSGSSSCLLLQKNSAFFWVDTASRSKSARRDVRVEALWPDLSRPTSVELEPINDSDHLDQILLRAQELSQPILID 103 (156)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~p~~~~~~~i~~~~~~~~~l~~a~~~~k~vlV~ 103 (156)
..+.|.+.|+|++++-+.+...-|.|..........+.... . ..+..+++.+++++++. ...++++|-
T Consensus 83 l~~~~~V~~~PTl~~f~~G~~~~y~G~~~~~~i~~~i~~~~------~---~~v~~i~~~~~~~~~~~---~~~~~~vv~ 150 (367)
T 3us3_A 83 VAKKLGLTEEDSIYVFKEDEVIEYDGEFSADTLVEFLLDVL------E---DPVELIEGERELQAFEN---IEDEIKLIG 150 (367)
T ss_dssp HHHHHTCCSTTEEEEEETTEEEECCSCCSHHHHHHHHHHHH------S---CSEEECCSHHHHHHHHH---CCSSCEEEE
T ss_pred HHHHcCCCcCceEEEEECCcEEEeCCCCCHHHHHHHHHHhc------C---CCcEEcCCHHHHHHHhc---cCCCcEEEE
Confidence 34457899999999887655444554433333332222211 1 23567878889999984 256889999
Q ss_pred EeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCc
Q 031608 104 WMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNI 150 (156)
Q Consensus 104 F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~ 150 (156)
|+++||. ...+.|.++|..+.+.+.|+.++ +.+++.+|++.
T Consensus 151 ff~~~~~---~~~~~f~~~A~~~~~~~~F~~~~---~~~~~~~~~v~ 191 (367)
T 3us3_A 151 YFKNKDS---EHYKAFKEAAEEFHPYIPFFATF---DSKVAKKLTLK 191 (367)
T ss_dssp ECSCTTC---HHHHHHHHHHHHHTTTSCEEEEC---CHHHHHHHTCC
T ss_pred EECCCCc---hHHHHHHHHHHhhcCCcEEEEEC---CHHHHHHcCCC
Confidence 9999876 56788999999997778888764 56889999986
No 272
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=97.79 E-value=0.00013 Score=58.66 Aligned_cols=107 Identities=15% Similarity=0.003 Sum_probs=73.2
Q ss_pred CCccCCCCCccccccCCceEEEeCCCccccccccchhccccCCCCCCCccceEecCChhhHHHHHHHhhcCCCcEEEEEe
Q 031608 26 QPWSSGSSSCLLLQKNSAFFWVDTASRSKSARRDVRVEALWPDLSRPTSVELEPINDSDHLDQILLRAQELSQPILIDWM 105 (156)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~p~~~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~ 105 (156)
..|.+.|+|++.+-+.+...-+.|..........+. ...+ ..+..+++.+++++++. ..++.++|.|+
T Consensus 83 ~~~~v~~~Pt~~~~~~g~~~~~~G~~~~~~l~~~i~-------~~~~--~~~~~l~~~~~~~~~~~---~~~~~~vv~ff 150 (350)
T 1sji_A 83 KKLGFDEEGSLYVLKGDRTIEFDGEFAADVLVEFLL-------DLIE--DPVEIINSKLEVQAFER---IEDQIKLIGFF 150 (350)
T ss_dssp HHHTCCSTTEEEEEETTEEEEECSCCCHHHHHHHHH-------TTSS--CSEEECCSHHHHHHHHH---CCSSCEEEEEC
T ss_pred HhcCCCccceEEEEECCcEEEecCCCCHHHHHHHHH-------HhcC--CcceeccchHHHHHHhc---cCCCcEEEEEE
Confidence 447889999998777665444544322222222211 1112 23567777889999883 14678899999
Q ss_pred CCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCc
Q 031608 106 ASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNI 150 (156)
Q Consensus 106 A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~ 150 (156)
++||.+ ..+.|.++++.+.+.+.|+.+ .+++++.++++.
T Consensus 151 ~~~~~~---~~~~~~~~A~~~~~~~~f~~~---~~~~~~~~~~v~ 189 (350)
T 1sji_A 151 KSEESE---YYKAFEEAAEHFQPYIKFFAT---FDKGVAKKLSLK 189 (350)
T ss_dssp SCTTSH---HHHHHHHHHHHTTTTSEEEEE---CCHHHHHHHTCC
T ss_pred CCCCcH---HHHHHHHHHHhhccCcEEEEE---CCHHHHHHcCCC
Confidence 999755 568999999999777888877 367899999987
No 273
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.58 E-value=0.00016 Score=53.67 Aligned_cols=71 Identities=10% Similarity=0.018 Sum_probs=54.5
Q ss_pred hhHHHHHHHh----hcCCCcEEEEEeCCCChhHHhhhHHH---HHHHHHhcCCeEEEEEECCCCH---------------
Q 031608 84 DHLDQILLRA----QELSQPILIDWMASWCRKCIYLKPKL---EKLAAEFDTKLKFYYVDVNKVS--------------- 141 (156)
Q Consensus 84 ~~~~~~l~~a----~~~~k~vlV~F~A~WC~~Ck~~~p~l---~~la~~~~~~v~~~~vd~d~~~--------------- 141 (156)
..|++.+..| +..+|+++|+++++||..|..+.... +++.+-+..++.+.+.|+++..
T Consensus 38 gs~~~Al~~A~~~~k~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~nfV~w~~dv~~~e~~~~~~~~~~~~~g~ 117 (178)
T 2ec4_A 38 GSLEAAFQEAFYVKARDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQNFITWAWDLTKDSNRARFLTMCNRHFGS 117 (178)
T ss_dssp SCHHHHHHTTTSSCTTTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHHTEEEEEEECCSHHHHHHHHHHHHHHTCH
T ss_pred CCHHHHHHHHHhhhhhhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHcCEEEEEEeCCCchhhhhhhhhhhhhhHH
Confidence 3688888888 78899999999999999999997443 4444444447999999998754
Q ss_pred HHH---HHhCCcccee
Q 031608 142 KDL---VKRGNISVSI 154 (156)
Q Consensus 142 ~l~---~~~~i~sv~~ 154 (156)
.++ +.+++.++|+
T Consensus 118 ~~a~~~~~~~~~~~P~ 133 (178)
T 2ec4_A 118 VVAQTIRTQKTDQFPL 133 (178)
T ss_dssp HHHHHHHHSCSTTCSE
T ss_pred HHHHHHhhcCCCCCCe
Confidence 333 3378888876
No 274
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=97.47 E-value=0.00016 Score=58.32 Aligned_cols=71 Identities=8% Similarity=-0.041 Sum_probs=48.8
Q ss_pred ccCCCCCCCccceEecCChhhHHHHHHHhhcCCCcEEEEEe-CCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCC---
Q 031608 65 LWPDLSRPTSVELEPINDSDHLDQILLRAQELSQPILIDWM-ASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKV--- 140 (156)
Q Consensus 65 ~~~~~~~p~~~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~-A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~--- 140 (156)
..|+|++++.. ...+... +| .||++|++|| +.||+.|..+.+.|.+ ....++.+++|+.|..
T Consensus 3 k~p~F~l~~~~-G~~~~Ls-d~---------~Gk~vvl~F~p~~~tp~C~~e~~~~~~---~~~~~~~v~gis~D~~~~~ 68 (322)
T 4eo3_A 3 RVKHFELLTDE-GKTFTHV-DL---------YGKYTILFFFPKAGTSGSTREAVEFSR---ENFEKAQVVGISRDSVEAL 68 (322)
T ss_dssp BCCCCEEEETT-SCEEEGG-GT---------TTSEEEEEECSSTTSHHHHHHHHHHHH---SCCTTEEEEEEESCCHHHH
T ss_pred CCCCcEEECCC-cCEEeHH-Hh---------CCCeEEEEEECCCCCCCCHHHHHHHHH---HhhCCCEEEEEeCCCHHHH
Confidence 45788887753 3444433 33 5999999999 7899999999888764 2223689999998752
Q ss_pred HHHHHHhCC
Q 031608 141 SKDLVKRGN 149 (156)
Q Consensus 141 ~~l~~~~~i 149 (156)
...++++++
T Consensus 69 ~~f~~~~~l 77 (322)
T 4eo3_A 69 KRFKEKNDL 77 (322)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHhhCC
Confidence 234455554
No 275
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=97.36 E-value=0.00038 Score=50.78 Aligned_cols=43 Identities=12% Similarity=0.203 Sum_probs=37.4
Q ss_pred CCCcEEEEEeCCCChhHHhhhHHH-HHHHHHhcCCeEEEEEECC
Q 031608 96 LSQPILIDWMASWCRKCIYLKPKL-EKLAAEFDTKLKFYYVDVN 138 (156)
Q Consensus 96 ~~k~vlV~F~A~WC~~Ck~~~p~l-~~la~~~~~~v~~~~vd~d 138 (156)
++++++|+||..+||+|..+.+.+ .++.+++++++.+..+.+.
T Consensus 16 ~~~~~~ief~d~~CP~C~~~~~~l~~~l~~~~~~~v~~~~~~l~ 59 (195)
T 3c7m_A 16 NADKTLIKVFSYACPFCYKYDKAVTGPVSEKVKDIVAFTPFHLE 59 (195)
T ss_dssp SCTTEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTCEEEEEECT
T ss_pred CCCcEEEEEEeCcCcchhhCcHHHHHHHHHhCCCceEEEEEecC
Confidence 367789999999999999999999 9999988877888877765
No 276
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=97.35 E-value=0.00028 Score=52.46 Aligned_cols=55 Identities=15% Similarity=0.226 Sum_probs=42.7
Q ss_pred CCCcEEEEEe-CCCChhHH-hhhHHHHHHHHHh-cC-CeE-EEEEECCCC---HHHHHHhCCc
Q 031608 96 LSQPILIDWM-ASWCRKCI-YLKPKLEKLAAEF-DT-KLK-FYYVDVNKV---SKDLVKRGNI 150 (156)
Q Consensus 96 ~~k~vlV~F~-A~WC~~Ck-~~~p~l~~la~~~-~~-~v~-~~~vd~d~~---~~l~~~~~i~ 150 (156)
.|+++|+.|| +.|||.|- .+.+.|.+.+.++ .. ++. ++.|..|.. ...++++++.
T Consensus 42 ~gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~g~~~V~gvS~D~~~~~~~~~~~~~~~ 104 (182)
T 1xiy_A 42 NNKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENNFDDIYCITNNDIYVLKSWFKSMDIK 104 (182)
T ss_dssp TTCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTSCCSEEEEEESSCHHHHHHHHHHTTCC
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeCCCHHHHHHHHHHcCCC
Confidence 4778777776 89999999 8999999998888 53 574 899999873 4556666653
No 277
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=97.33 E-value=0.00047 Score=49.66 Aligned_cols=42 Identities=21% Similarity=0.511 Sum_probs=37.0
Q ss_pred CCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEEC
Q 031608 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDV 137 (156)
Q Consensus 96 ~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~ 137 (156)
.++++||.|+.-.||+|+.+.|.+.++.+++++++.+..+..
T Consensus 20 ~~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~~~~~~~~~~ 61 (184)
T 4dvc_A 20 SSSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPEGAKFQKNHV 61 (184)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHTSCTTCEEEEEEC
T ss_pred CCCCEEEEEECCCCHhHHHHhHHHHHHHhhcCCceEEEEEec
Confidence 478999999999999999999999999999987677766655
No 278
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=97.31 E-value=0.00042 Score=52.49 Aligned_cols=66 Identities=15% Similarity=0.131 Sum_probs=55.4
Q ss_pred cceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCcc
Q 031608 75 VELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS 151 (156)
Q Consensus 75 ~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~s 151 (156)
.+.+.+++.+++++++. .++++||-|+++| |..+.|.|.++|+.+. .+.|+.. .+++++.++++..
T Consensus 9 ~~~~~l~s~~~~~~~l~----~~~v~vVgff~~~---~~~~~~~f~~~A~~l~-~~~F~~t---~~~~v~~~~~v~~ 74 (227)
T 4f9z_D 9 QEPTWLTDVPAAMEFIA----ATEVAVIGFFQDL---EIPAVPILHSMVQKFP-GVSFGIS---TDSEVLTHYNITG 74 (227)
T ss_dssp CCCEECCSHHHHHHHHH----TSSEEEEEECSCS---CSTHHHHHHHHTTTCT-TSEEEEE---CCHHHHHHTTCCS
T ss_pred CCCeeeCCHHHHHHHHh----cCCeEEEEEecCC---CchhHHHHHHHHHhCC-CceEEEE---CCHHHHHHcCCCC
Confidence 45688999999999984 6899999999999 5689999999999995 6888764 4788999999864
No 279
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=97.28 E-value=0.00023 Score=52.46 Aligned_cols=82 Identities=12% Similarity=0.073 Sum_probs=57.5
Q ss_pred cchhccccCCCCCCCccceEecCChhhHHHHHHHhhcCCCcEEEEEe-CCCChhHHhhhHHHHHHHHHhcC-CeE-EEEE
Q 031608 59 DVRVEALWPDLSRPTSVELEPINDSDHLDQILLRAQELSQPILIDWM-ASWCRKCIYLKPKLEKLAAEFDT-KLK-FYYV 135 (156)
Q Consensus 59 ~~~~~~~~~~~~~p~~~~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~-A~WC~~Ck~~~p~l~~la~~~~~-~v~-~~~v 135 (156)
-..++..+|+|.++.......+...+.+ .|+++|+.|| +.|||.|-.+.+.|.+.+.++.. ++. ++.|
T Consensus 13 ~~~vGd~aPdf~l~~~g~~~~v~L~d~~---------~gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~gv~~VigI 83 (171)
T 2xhf_A 13 PIKVGDIIPDVLVYEDVPSKSFPIHDVF---------RGRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEEGYHTIACI 83 (171)
T ss_dssp CCCTTCBCCCCEEECSSTTCEEETHHHH---------TTSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHTTCCEEEEE
T ss_pred cccCcCCCCCeEEecCCCCcEEEhHHHh---------CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCCEEEEE
Confidence 4567778888887743211344333222 4788888887 78999999999999998888863 575 8899
Q ss_pred ECCCC---HHHHHHhCC
Q 031608 136 DVNKV---SKDLVKRGN 149 (156)
Q Consensus 136 d~d~~---~~l~~~~~i 149 (156)
.+|.. .+.++++++
T Consensus 84 S~D~~~~~~~w~~~~~~ 100 (171)
T 2xhf_A 84 AVNDPFVMAAWGKTVDP 100 (171)
T ss_dssp ESSCHHHHHHHHHHHCT
T ss_pred eCCCHHHHHHHHHhcCC
Confidence 99863 355666665
No 280
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=97.19 E-value=0.00046 Score=48.95 Aligned_cols=60 Identities=15% Similarity=0.146 Sum_probs=40.4
Q ss_pred hhHHHHHHHhhcCCCcEEEEEeC----CCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHH----HhCCcccee
Q 031608 84 DHLDQILLRAQELSQPILIDWMA----SWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLV----KRGNISVSI 154 (156)
Q Consensus 84 ~~~~~~l~~a~~~~k~vlV~F~A----~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~----~~~i~sv~~ 154 (156)
+.+++++. .+ .|+|+.++ +||+.|++.+..|.++ ++.+..+|+++++++.. ..|..++|+
T Consensus 26 ~~v~~~i~----~~-~Vvvy~ks~~~~~~Cp~C~~ak~~L~~~------gv~y~~vdI~~d~~~~~~L~~~~G~~tvP~ 93 (135)
T 2wci_A 26 EKIQRQIA----EN-PILLYMKGSPKLPSCGFSAQAVQALAAC------GERFAYVDILQNPDIRAELPKYANWPTFPQ 93 (135)
T ss_dssp HHHHHHHH----HC-SEEEEESBCSSSBSSHHHHHHHHHHHTT------CSCCEEEEGGGCHHHHHHHHHHHTCCSSCE
T ss_pred HHHHHHhc----cC-CEEEEEEecCCCCCCccHHHHHHHHHHc------CCceEEEECCCCHHHHHHHHHHHCCCCcCE
Confidence 45555653 23 45554444 8999999999988764 36788889987665543 347777764
No 281
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=97.03 E-value=0.00071 Score=47.43 Aligned_cols=65 Identities=22% Similarity=0.147 Sum_probs=39.3
Q ss_pred hhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCH----H-HHHHhCCcccee
Q 031608 83 SDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVS----K-DLVKRGNISVSI 154 (156)
Q Consensus 83 ~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~----~-l~~~~~i~sv~~ 154 (156)
.++|++++. .++ ++.|+.+|||.|++.+..|.+.. .+...+..+.||.+.+. + +.+..|..+||+
T Consensus 4 ~~~~~~ii~----~~~--Vvvysk~~Cp~C~~ak~lL~~~~-~~~v~~~~idid~~~d~~~~~~~l~~~~G~~tVP~ 73 (127)
T 3l4n_A 4 QKEYSLILD----LSP--IIIFSKSTCSYSKGMKELLENEY-QFIPNYYIIELDKHGHGEELQEYIKLVTGRGTVPN 73 (127)
T ss_dssp HHHHHHHHT----SCS--EEEEECTTCHHHHHHHHHHHHHE-EEESCCEEEEGGGSTTHHHHHHHHHHHHSCCSSCE
T ss_pred HHHHHHHHc----cCC--EEEEEcCCCccHHHHHHHHHHhc-ccCCCcEEEEecCCCCHHHHHHHHHHHcCCCCcce
Confidence 346778772 333 66699999999999999998741 11212344444444332 2 223347777774
No 282
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=96.79 E-value=0.0027 Score=48.19 Aligned_cols=51 Identities=18% Similarity=0.137 Sum_probs=38.2
Q ss_pred CcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCC---HHHHHHhCCcccee
Q 031608 98 QPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKV---SKDLVKRGNISVSI 154 (156)
Q Consensus 98 k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~---~~l~~~~~i~sv~~ 154 (156)
...++.|+.+||+.|++.+..|++. ++.+-.+|++.+ .++.+.+|..++|+
T Consensus 169 ~~~i~ly~~~~Cp~C~~a~~~L~~~------~i~~~~~~i~~~~~~~~l~~~~g~~~vP~ 222 (241)
T 1nm3_A 169 QESISIFTKPGCPFCAKAKQLLHDK------GLSFEEIILGHDATIVSVRAVSGRTTVPQ 222 (241)
T ss_dssp CCCEEEEECSSCHHHHHHHHHHHHH------TCCCEEEETTTTCCHHHHHHHTCCSSSCE
T ss_pred cceEEEEECCCChHHHHHHHHHHHc------CCceEEEECCCchHHHHHHHHhCCCCcCE
Confidence 4457778999999999999988864 255666777653 34677788888875
No 283
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=96.78 E-value=0.0035 Score=42.32 Aligned_cols=42 Identities=12% Similarity=0.011 Sum_probs=30.4
Q ss_pred CCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHH----HhCCcccee
Q 031608 107 SWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLV----KRGNISVSI 154 (156)
Q Consensus 107 ~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~----~~~i~sv~~ 154 (156)
||||.|++.+..|.+. ++.+-.+|+++++++.. ..|..++|.
T Consensus 31 p~Cp~C~~ak~~L~~~------gi~~~~~dI~~~~~~~~~l~~~~g~~tvP~ 76 (109)
T 3ipz_A 31 PMCGFSNTVVQILKNL------NVPFEDVNILENEMLRQGLKEYSNWPTFPQ 76 (109)
T ss_dssp BSSHHHHHHHHHHHHT------TCCCEEEEGGGCHHHHHHHHHHHTCSSSCE
T ss_pred CCChhHHHHHHHHHHc------CCCcEEEECCCCHHHHHHHHHHHCCCCCCe
Confidence 4999999999988874 36677788877665433 336677763
No 284
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=96.77 E-value=0.0029 Score=43.00 Aligned_cols=47 Identities=13% Similarity=0.069 Sum_probs=33.8
Q ss_pred EEEeC-----CCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHH----hCCcccee
Q 031608 102 IDWMA-----SWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVK----RGNISVSI 154 (156)
Q Consensus 102 V~F~A-----~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~----~~i~sv~~ 154 (156)
|.|.. +|||.|++.+..|.+. ++.+..+|++.++++... .|..++|.
T Consensus 19 vlf~kg~~~~~~Cp~C~~ak~~L~~~------gi~y~~~di~~d~~~~~~l~~~~g~~tvP~ 74 (111)
T 3zyw_A 19 MLFMKGTPQEPRCGFSKQMVEILHKH------NIQFSSFDIFSDEEVRQGLKAYSSWPTYPQ 74 (111)
T ss_dssp EEEESBCSSSBSSHHHHHHHHHHHHT------TCCCEEEEGGGCHHHHHHHHHHHTCCSSCE
T ss_pred EEEEecCCCCCcchhHHHHHHHHHHc------CCCeEEEECcCCHHHHHHHHHHHCCCCCCE
Confidence 44777 9999999999888763 366777898876655332 36666664
No 285
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=96.66 E-value=0.0053 Score=39.32 Aligned_cols=48 Identities=19% Similarity=0.179 Sum_probs=34.9
Q ss_pred EEEEeCC----CChhHHhhhHHHHHHHHHhcCCeEEEEEECC-----CCHH----HHHHhCCc-----ccee
Q 031608 101 LIDWMAS----WCRKCIYLKPKLEKLAAEFDTKLKFYYVDVN-----KVSK----DLVKRGNI-----SVSI 154 (156)
Q Consensus 101 lV~F~A~----WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d-----~~~~----l~~~~~i~-----sv~~ 154 (156)
++.|+.+ ||+.|++.+..|++. ++.+-.+|++ .+++ +.+..|.. ++|+
T Consensus 2 v~iY~~~~~~~~Cp~C~~ak~~L~~~------gi~y~~idI~~~~~~~~~~~~~~l~~~~g~~~~~~~tvP~ 67 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDNAKRLLTVK------KQPFEFINIMPEKGVFDDEKIAELLTKLGRDTQIGLTMPQ 67 (87)
T ss_dssp EEEEECCTTTSCCHHHHHHHHHHHHT------TCCEEEEESCSBTTBCCHHHHHHHHHHHTCSCCTTCCSCE
T ss_pred EEEEEeCCCCCcCccHHHHHHHHHHc------CCCEEEEEeeccccccCHHHHHHHHHHhCCCCCCCCccCE
Confidence 4568899 999999999888773 3667778887 5543 45566776 6764
No 286
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=96.62 E-value=0.0021 Score=46.03 Aligned_cols=37 Identities=16% Similarity=0.259 Sum_probs=30.5
Q ss_pred CCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEEC
Q 031608 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDV 137 (156)
Q Consensus 96 ~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~ 137 (156)
+++.+|+.|+.++||.|+++.+.++++ + ++.++..+.
T Consensus 13 ~a~~~vv~f~D~~Cp~C~~~~~~l~~l----~-~v~v~~~~~ 49 (147)
T 3gv1_A 13 NGKLKVAVFSDPDCPFCKRLEHEFEKM----T-DVTVYSFMM 49 (147)
T ss_dssp TCCEEEEEEECTTCHHHHHHHHHHTTC----C-SEEEEEEEC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHhhc----C-ceEEEEEEc
Confidence 578999999999999999999998764 3 477766654
No 287
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=96.59 E-value=0.011 Score=40.79 Aligned_cols=42 Identities=10% Similarity=-0.107 Sum_probs=30.3
Q ss_pred CCChhHHhhhHHHHHHHHHhcCCeE---EEEEECCCCHHHHH----HhCCcccee
Q 031608 107 SWCRKCIYLKPKLEKLAAEFDTKLK---FYYVDVNKVSKDLV----KRGNISVSI 154 (156)
Q Consensus 107 ~WC~~Ck~~~p~l~~la~~~~~~v~---~~~vd~d~~~~l~~----~~~i~sv~~ 154 (156)
||||.|++.+..|.+.. +. +..+|+++++++.. ..|..++|+
T Consensus 29 p~Cp~C~~ak~lL~~~g------v~~~~~~~~dv~~~~~~~~~l~~~sg~~tvP~ 77 (121)
T 3gx8_A 29 PKCGFSRATIGLLGNQG------VDPAKFAAYNVLEDPELREGIKEFSEWPTIPQ 77 (121)
T ss_dssp BCTTHHHHHHHHHHHHT------BCGGGEEEEECTTCHHHHHHHHHHHTCCSSCE
T ss_pred CCCccHHHHHHHHHHcC------CCcceEEEEEecCCHHHHHHHHHHhCCCCCCe
Confidence 49999999999998852 44 77888887765533 346666664
No 288
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=96.53 E-value=0.0058 Score=42.11 Aligned_cols=60 Identities=8% Similarity=0.108 Sum_probs=39.4
Q ss_pred hhhHHHHHHHhhcCCCcEEEEEeC-----CCChhHHhhhHHHHHHHHHhcCCeE-EEEEECCCCHHHHHH----hCCccc
Q 031608 83 SDHLDQILLRAQELSQPILIDWMA-----SWCRKCIYLKPKLEKLAAEFDTKLK-FYYVDVNKVSKDLVK----RGNISV 152 (156)
Q Consensus 83 ~~~~~~~l~~a~~~~k~vlV~F~A-----~WC~~Ck~~~p~l~~la~~~~~~v~-~~~vd~d~~~~l~~~----~~i~sv 152 (156)
.+.+++++. .+ +|+| |.. ||||.|++.+..|++. ++. +..+|+++++++.+. .|..++
T Consensus 10 ~~~v~~~i~----~~-~Vvv-fsk~t~~~p~Cp~C~~ak~lL~~~------gv~~~~~vdV~~d~~~~~~l~~~tg~~tv 77 (118)
T 2wem_A 10 AEQLDALVK----KD-KVVV-FLKGTPEQPQCGFSNAVVQILRLH------GVRDYAAYNVLDDPELRQGIKDYSNWPTI 77 (118)
T ss_dssp HHHHHHHHH----HS-SEEE-EESBCSSSBSSHHHHHHHHHHHHT------TCCCCEEEESSSCHHHHHHHHHHHTCCSS
T ss_pred HHHHHHHhc----cC-CEEE-EEecCCCCCccHHHHHHHHHHHHc------CCCCCEEEEcCCCHHHHHHHHHHhCCCCc
Confidence 346667774 23 4444 665 4999999999988864 353 777888877655433 366666
Q ss_pred ee
Q 031608 153 SI 154 (156)
Q Consensus 153 ~~ 154 (156)
|+
T Consensus 78 P~ 79 (118)
T 2wem_A 78 PQ 79 (118)
T ss_dssp CE
T ss_pred Ce
Confidence 64
No 289
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=96.47 E-value=0.014 Score=44.58 Aligned_cols=65 Identities=8% Similarity=0.161 Sum_probs=53.4
Q ss_pred ceEecCChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCc
Q 031608 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNI 150 (156)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~ 150 (156)
.+..|++.+++++++ ..++.++|-|+++| |..+.+.|.++|..+.+.+.|+.+. +++++.++++.
T Consensus 7 ~v~~l~s~~~~~~~l----~~~~v~vvgff~~~---~~~~~~~f~~~A~~lr~~~~F~~~~---~~~v~~~~~~~ 71 (252)
T 2h8l_A 7 ASVPLRTEEEFKKFI----SDKDASIVGFFDDS---FSEAHSEFLKAASNLRDNYRFAHTN---VESLVNEYDDN 71 (252)
T ss_dssp CEEECCSHHHHHHHH----TSSSCEEEEEESCT---TSHHHHHHHHHHHHTTTTSCEEEEC---CHHHHHHHCSS
T ss_pred CceeecCHHHHHHHh----hcCCeEEEEEECCC---CChHHHHHHHHHHhcccCcEEEEEC---hHHHHHHhCCC
Confidence 367788888999998 46788899999998 5567889999999997778888773 57788999887
No 290
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=96.29 E-value=0.0064 Score=39.53 Aligned_cols=48 Identities=13% Similarity=0.087 Sum_probs=33.7
Q ss_pred EEEEeCCCChhH------HhhhHHHHHHHHHhcCCeEEEEEECCCCHHH----HHHhC--Ccccee
Q 031608 101 LIDWMASWCRKC------IYLKPKLEKLAAEFDTKLKFYYVDVNKVSKD----LVKRG--NISVSI 154 (156)
Q Consensus 101 lV~F~A~WC~~C------k~~~p~l~~la~~~~~~v~~~~vd~d~~~~l----~~~~~--i~sv~~ 154 (156)
++.|+.+||+.| ++....|++ . ++.+..+|++.+++. .+..| ..++|+
T Consensus 4 v~ly~~~~C~~c~~~~~~~~ak~~L~~----~--~i~~~~~di~~~~~~~~~l~~~~g~~~~~vP~ 63 (93)
T 1t1v_A 4 LRVYSTSVTGSREIKSQQSEVTRILDG----K--RIQYQLVDISQDNALRDEMRTLAGNPKATPPQ 63 (93)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHHHHH----T--TCCCEEEETTSCHHHHHHHHHHTTCTTCCSCE
T ss_pred EEEEEcCCCCCchhhHHHHHHHHHHHH----C--CCceEEEECCCCHHHHHHHHHHhCCCCCCCCE
Confidence 556899999999 677666654 2 377888999876543 33567 567764
No 291
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=96.27 E-value=0.0091 Score=44.51 Aligned_cols=44 Identities=18% Similarity=0.387 Sum_probs=36.4
Q ss_pred CCCcEEEEEeCCCChhHHhhhHHH-HHHHHHhc--CCeEEEEEECCC
Q 031608 96 LSQPILIDWMASWCRKCIYLKPKL-EKLAAEFD--TKLKFYYVDVNK 139 (156)
Q Consensus 96 ~~k~vlV~F~A~WC~~Ck~~~p~l-~~la~~~~--~~v~~~~vd~d~ 139 (156)
+++++||.|+...||+|+++.+.+ ..+.+.|. ++|.|+..++.-
T Consensus 28 ~a~vtvvef~D~~CP~C~~~~~~~~~~l~~~~~~~g~v~~~~~~~p~ 74 (202)
T 3gha_A 28 DAPVTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVNVMF 74 (202)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTTSEEEEEEECCC
T ss_pred CCCEEEEEEECCCChhHHHHHHHhhHHHHHHhccCCeEEEEEEecCc
Confidence 478899999999999999999987 66777774 469999888753
No 292
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=96.09 E-value=0.028 Score=45.56 Aligned_cols=68 Identities=13% Similarity=0.152 Sum_probs=54.0
Q ss_pred EecCChhhHHHHHHHhhcCCCcEEEEEeCCCCh-hHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCc
Q 031608 78 EPINDSDHLDQILLRAQELSQPILIDWMASWCR-KCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNI 150 (156)
Q Consensus 78 ~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC~-~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~ 150 (156)
.+++ .+++.+++ ..+.+++|.|+.++|. .|..+...+.+++.++.+++.|+.+|.++.++.+..+|+.
T Consensus 222 ~elt-~~~~~~~~----~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~id~~~~~~~~~~~gl~ 290 (382)
T 2r2j_A 222 REIT-FENGEELT----EEGLPFLILFHMKEDTESLEIFQNEVARQLISEKGTINFLHADCDKFRHPLLHIQKT 290 (382)
T ss_dssp EECC-HHHHHHHH----TTCCCEEEEEECTTCCHHHHHHHHHHHHHTGGGTTTSEEEEEETTTTHHHHHHTTCC
T ss_pred EecC-hhhHHHHh----cCCCcEEEEEecCCchHHHHHHHHHHHHHHHHhCCeeEEEEEchHHhHHHHHHcCCC
Confidence 3444 56777776 4689999999999984 4566667777777677778999999999999999999986
No 293
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=95.96 E-value=0.02 Score=45.09 Aligned_cols=54 Identities=15% Similarity=0.097 Sum_probs=39.6
Q ss_pred cEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCC------------------CHHHHHHhCCccc--ee
Q 031608 99 PILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNK------------------VSKDLVKRGNISV--SI 154 (156)
Q Consensus 99 ~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~------------------~~~l~~~~~i~sv--~~ 154 (156)
..|..|+.++|+.|...+..|++++.+++ +....+++++ ..++++++|..+| |+
T Consensus 44 ~~VelyTs~gCp~C~~Ak~lL~~~~~~~~--vi~l~~~v~~~dylgw~D~~a~~~~~~r~~~~~~~~G~~tVyTPq 117 (270)
T 2axo_A 44 GVVELFTSQGCASCPPADEALRKMIQKGD--VVGLSYHVDYWNYLGWTDSLASKENTERQYGYMRALGRNGVYTPQ 117 (270)
T ss_dssp CEEEEEECTTCTTCHHHHHHHHHHHHHTS--SEEEEEECSTTCSSSSCCTTCCHHHHHHHHHHHHHTTCSCCCSSE
T ss_pred cEEEEEeCCCCCChHHHHHHHHHhhccCC--eeeEEEEEEEecccccccchhhhhhhHHHHHHHHHhCCCcccCCE
Confidence 57778999999999999999999987754 4333344321 2346778899888 64
No 294
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.96 E-value=0.011 Score=39.94 Aligned_cols=38 Identities=21% Similarity=0.183 Sum_probs=28.8
Q ss_pred EEEEEeCCCChhHH------hhhHHHHHHHHHhcCCeEEEEEECCCCHHH
Q 031608 100 ILIDWMASWCRKCI------YLKPKLEKLAAEFDTKLKFYYVDVNKVSKD 143 (156)
Q Consensus 100 vlV~F~A~WC~~Ck------~~~p~l~~la~~~~~~v~~~~vd~d~~~~l 143 (156)
-|+.|+.+||+.|+ +.+..|++ + ++.+..+|++.+++.
T Consensus 9 ~V~vy~~~~C~~C~~~~~~~~ak~~L~~----~--gi~y~~vdI~~~~~~ 52 (111)
T 2ct6_A 9 VIRVFIASSSGFVAIKKKQQDVVRFLEA----N--KIEFEEVDITMSEEQ 52 (111)
T ss_dssp CEEEEECSSCSCHHHHHHHHHHHHHHHH----T--TCCEEEEETTTCHHH
T ss_pred EEEEEEcCCCCCcccchhHHHHHHHHHH----c--CCCEEEEECCCCHHH
Confidence 46678999999999 66666654 2 378889999887654
No 295
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=95.95 E-value=0.025 Score=43.27 Aligned_cols=66 Identities=8% Similarity=-0.095 Sum_probs=53.7
Q ss_pred ceEecCChhhHHHHHHHhhcC-CCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCcc
Q 031608 76 ELEPINDSDHLDQILLRAQEL-SQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS 151 (156)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~-~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~s 151 (156)
.+..|++.+++++++. . ++.++|-|++++| ..+.+.|.++|+.+.+.+.|+.. .+++++.++++..
T Consensus 7 ~v~~l~s~~~~~~~~~----~~~~v~vVgff~~~~---~~~~~~F~~~A~~lr~~~~F~~t---~~~~v~~~~~v~~ 73 (250)
T 3ec3_A 7 PSKEILTLKQVQEFLK----DGDDVVILGVFQGVG---DPGYLQYQDAANTLREDYKFHHT---FSTEIAKFLKVSL 73 (250)
T ss_dssp SSEECCCHHHHHHHHH----HCSSCEEEEECSCTT---CHHHHHHHHHHHHHTTTCCEEEE---CCHHHHHHHTCCS
T ss_pred CceecCCHHHHHHHHh----cCCCeEEEEEEcCCC---chHHHHHHHHHHhhhcCcEEEEE---CcHHHHHHcCCCC
Confidence 3577888889999884 4 7889999999985 57889999999999777888876 3678888888763
No 296
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=95.82 E-value=0.016 Score=42.60 Aligned_cols=42 Identities=12% Similarity=0.086 Sum_probs=35.3
Q ss_pred CCCcEEEEEeCCCChhHHhhhHHHHHHHHHh-cCCeEEEEEEC
Q 031608 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEF-DTKLKFYYVDV 137 (156)
Q Consensus 96 ~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~-~~~v~~~~vd~ 137 (156)
+.+.+|+.|.-.-||+|+++.+.+.++.+++ +++|.++.-+.
T Consensus 13 ~a~vtiv~f~D~~Cp~C~~~~~~~~~~l~~~~~g~v~~v~r~~ 55 (182)
T 3gn3_A 13 HGPRLFEVFLEPTCPFSVKAFFKLDDLLAQAGEDNVTVRIRLQ 55 (182)
T ss_dssp CCSEEEEEEECTTCHHHHHHHTTHHHHHHHHCTTTEEEEEEEC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHHHhCCCCEEEEEEEc
Confidence 4678899999999999999999998877766 66788887775
No 297
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=95.80 E-value=0.019 Score=43.64 Aligned_cols=43 Identities=12% Similarity=0.413 Sum_probs=35.4
Q ss_pred CCCcEEEEEeCCCChhHHhhhHH-HHHHHHHh--cCCeEEEEEECC
Q 031608 96 LSQPILIDWMASWCRKCIYLKPK-LEKLAAEF--DTKLKFYYVDVN 138 (156)
Q Consensus 96 ~~k~vlV~F~A~WC~~Ck~~~p~-l~~la~~~--~~~v~~~~vd~d 138 (156)
+++.+|+.|+...||+|+++.|. +.++.++| .++|.|+..+..
T Consensus 38 ~A~vtIvef~Dy~CP~C~~~~~~~~~~l~~~~~~~g~V~~v~~~~p 83 (226)
T 3f4s_A 38 KAPILMIEYASLTCYHCSLFHRNVFPKIKEKYIDTGKMLYIFRHFP 83 (226)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHTHHHHHHHHTTTTSEEEEEEECC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHcccCCeEEEEEEeCC
Confidence 46788999999999999999996 47888888 346888877764
No 298
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=95.25 E-value=0.049 Score=39.33 Aligned_cols=43 Identities=21% Similarity=0.464 Sum_probs=34.3
Q ss_pred CCCcEEEEEeCCCChhHHhhhHHH-HHHHHHhc--CCeEEEEEECC
Q 031608 96 LSQPILIDWMASWCRKCIYLKPKL-EKLAAEFD--TKLKFYYVDVN 138 (156)
Q Consensus 96 ~~k~vlV~F~A~WC~~Ck~~~p~l-~~la~~~~--~~v~~~~vd~d 138 (156)
++++.|+.|+..-||+|+.+.+.+ ..+.++|. +++.++..+..
T Consensus 10 ~a~~~i~~f~D~~Cp~C~~~~~~l~~~l~~~~~~~~~v~~~~~~~p 55 (186)
T 3bci_A 10 NGKPLVVVYGDYKCPYCKELDEKVMPKLRKNYIDNHKVEYQFVNLA 55 (186)
T ss_dssp -CCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSSEEEEEECC
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHHHHhccCCeEEEEEEecC
Confidence 468889999999999999999998 57777785 35777776653
No 299
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=94.73 E-value=0.086 Score=39.37 Aligned_cols=43 Identities=12% Similarity=0.140 Sum_probs=34.5
Q ss_pred CCCcEEEEEeCCCChhHHhhhHHHHHHHH-Hh--cCCeEEEEEECC
Q 031608 96 LSQPILIDWMASWCRKCIYLKPKLEKLAA-EF--DTKLKFYYVDVN 138 (156)
Q Consensus 96 ~~k~vlV~F~A~WC~~Ck~~~p~l~~la~-~~--~~~v~~~~vd~d 138 (156)
+.+.+||.|.-.-||.|+++.+.+....+ +| .++|.++..+.-
T Consensus 14 ~a~vtivef~D~~Cp~C~~~~~~~~~~l~~~~i~~g~v~~v~r~~p 59 (205)
T 3gmf_A 14 AAKLRLVEFVSYTCPHCSHFEIESEGQLKIGMVQPGKGAIEVRNFV 59 (205)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSEEEEEEECC
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhccCCeEEEEEEeCC
Confidence 47888999999999999999998865544 77 456888877763
No 300
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=94.49 E-value=0.089 Score=41.37 Aligned_cols=98 Identities=12% Similarity=0.121 Sum_probs=61.7
Q ss_pred cCCccCCCCCccccccCCce------------------EEEeCCCccccccccchhccccCCCCCCCccceEecCChhhH
Q 031608 25 QQPWSSGSSSCLLLQKNSAF------------------FWVDTASRSKSARRDVRVEALWPDLSRPTSVELEPINDSDHL 86 (156)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~r~~~~~~~~~~~~~p~~~~~~~i~~~~~~ 86 (156)
...|.+.|+|++++-+.+.. ..|.|. +.......|.....++ .+..+.+.+++
T Consensus 84 ~~~~~I~~~Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~-------r~~~~i~~fl~~~~~~--~v~~i~~~~~l 154 (298)
T 3ed3_A 84 CAKYDVNGFPTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGA-------RTLAPIVDFSLSRIRS--YVKKFVRIDTL 154 (298)
T ss_dssp HHHTTCCBSSEEEEEECCCC-------------CCCEEEECCSC-------CSHHHHHHHHHTTCCC--CEEECSCGGGH
T ss_pred HHhCCCCccceEEEEECCceeecccccccccccccccceeecCC-------cCHHHHHHHHHHhccc--ccEEcCCHHHH
Confidence 34577888898887666541 222222 2222222332222332 35678888889
Q ss_pred HHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCC
Q 031608 87 DQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNK 139 (156)
Q Consensus 87 ~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~ 139 (156)
++++. ..++++++.|.. .....+.|.+++..+.+.+.|+.++-.+
T Consensus 155 ~~~l~---~~~~~~vi~fs~-----~~~~~~~f~~~A~~~~~~~~F~~v~~~~ 199 (298)
T 3ed3_A 155 GSLLR---KSPKLSVVLFSK-----QDKISPVYKSIALDWLGKFDFYSISNKK 199 (298)
T ss_dssp HHHHT---SCSSEEEEEEES-----SSSCCHHHHHHHHHTBTTEEEEEEEGGG
T ss_pred HHHHh---cCCceEEEEEcC-----CCcchHHHHHHHHHhhcCcEEEEEcchH
Confidence 99885 235777777733 2346689999999998889999998654
No 301
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=94.44 E-value=0.21 Score=35.18 Aligned_cols=69 Identities=13% Similarity=0.035 Sum_probs=49.8
Q ss_pred EecCChhhHHHHHHHhhcCCCcEEEEEeCC-CChhHHhhhHHHHHHHHHhcCCeEEEEEEC--CCCHHHHHHhCCcc
Q 031608 78 EPINDSDHLDQILLRAQELSQPILIDWMAS-WCRKCIYLKPKLEKLAAEFDTKLKFYYVDV--NKVSKDLVKRGNIS 151 (156)
Q Consensus 78 ~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~-WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~--d~~~~l~~~~~i~s 151 (156)
.++ +.++..++. ..+.++.+.++.. --..=..+.+.++++|+++.+++.|+.+|. +++..++..+|+..
T Consensus 17 ~e~-t~en~~~~~----~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkgki~Fv~vd~~~~~~~~~l~~fGl~~ 88 (147)
T 3bj5_A 17 IEF-TEQTAPKIF----GGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFAFIDSDHTDNQRILEFFGLKK 88 (147)
T ss_dssp EEC-CTTTHHHHH----SSSCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTTTCEEEEECTTCGGGHHHHHHTTCCG
T ss_pred EEe-ccccHHHHh----cCCCceEEEEEecCCcHhHHHHHHHHHHHHHHcCCceEEEEEecchHhHHHHHHHcCCCc
Confidence 344 355677776 4566665554443 333455678999999999998899999999 66778889999985
No 302
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=94.29 E-value=0.055 Score=42.64 Aligned_cols=30 Identities=23% Similarity=0.203 Sum_probs=26.7
Q ss_pred CCCcEEEEEeCCCChhHHhhhHHHHHHHHH
Q 031608 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAE 125 (156)
Q Consensus 96 ~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~ 125 (156)
+++.+++.|+-+.||.|+++.+.+++..++
T Consensus 146 ~gk~~I~vFtDp~CPYCkkl~~~l~~~l~~ 175 (273)
T 3tdg_A 146 NKDKILYIVSDPMCPHCQKELTKLRDHLKE 175 (273)
T ss_dssp GTTCEEEEEECTTCHHHHHHHHTHHHHHHH
T ss_pred CCCeEEEEEECcCChhHHHHHHHHHHHhhC
Confidence 478999999999999999999999976654
No 303
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=93.34 E-value=0.076 Score=45.39 Aligned_cols=59 Identities=15% Similarity=0.164 Sum_probs=38.2
Q ss_pred hhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCC---HH----HHHHhCCcccee
Q 031608 84 DHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKV---SK----DLVKRGNISVSI 154 (156)
Q Consensus 84 ~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~---~~----l~~~~~i~sv~~ 154 (156)
+.+++++. ..+ ++.|+.+|||.|++.+..|.+.. +.+-.+|++.. ++ +.+..|..++|.
T Consensus 9 ~~v~~~i~----~~~--v~vy~~~~Cp~C~~~k~~L~~~~------i~~~~~dv~~~~~~~~~~~~l~~~~g~~tvP~ 74 (598)
T 2x8g_A 9 QWLRKTVD----SAA--VILFSKTTCPYCKKVKDVLAEAK------IKHATIELDQLSNGSAIQKCLASFSKIETVPQ 74 (598)
T ss_dssp HHHHHHHH----HCS--EEEEECTTCHHHHHHHHHHHHTT------CCCEEEEGGGSTTHHHHHHHTHHHHSCCCSCE
T ss_pred HHHHHHhc----cCC--EEEEECCCChhHHHHHHHHHHCC------CCcEEEEcccCcchHHHHHHHHHHhCCceeCE
Confidence 56777774 233 55699999999999999988642 44555666532 22 233456677764
No 304
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=93.13 E-value=0.085 Score=43.17 Aligned_cols=53 Identities=13% Similarity=0.064 Sum_probs=31.8
Q ss_pred EEEEeCCCChhHHhhhH-HHHHHHHHhcCCeEEEEEEC-CCCH----HHHHHhCCcccee
Q 031608 101 LIDWMASWCRKCIYLKP-KLEKLAAEFDTKLKFYYVDV-NKVS----KDLVKRGNISVSI 154 (156)
Q Consensus 101 lV~F~A~WC~~Ck~~~p-~l~~la~~~~~~v~~~~vd~-d~~~----~l~~~~~i~sv~~ 154 (156)
|+.|+.+|||.|++... .|+++.-.|. .+.++.+|- ++.+ ++.+..|..+||+
T Consensus 263 VvVYsk~~CPyC~~Ak~~LL~~~gV~y~-eidVlEld~~~~~~e~~~~L~~~tG~~TVPq 321 (362)
T 2jad_A 263 IFVASKTYCPYSHAALNTLFEKLKVPRS-KVLVLQLNDMKEGADIQAALYEINGQRTVPN 321 (362)
T ss_dssp EEEEECTTCHHHHHHHHHHHTTTCCCTT-TEEEEEGGGSTTHHHHHHHHHHHHCCCSSCE
T ss_pred EEEEEcCCCcchHHHHHHHHHHcCCCcc-eEEEEEeccccCCHHHHHHHHHHHCCCCcCE
Confidence 44589999999999876 5665433332 244444432 2232 3344568888874
No 305
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=92.77 E-value=0.09 Score=35.86 Aligned_cols=33 Identities=15% Similarity=0.180 Sum_probs=25.5
Q ss_pred EEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCC
Q 031608 101 LIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNK 139 (156)
Q Consensus 101 lV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~ 139 (156)
+..|+.++|+.|++....|++. ++.+-.+|+.+
T Consensus 7 i~iY~~~~C~~C~ka~~~L~~~------gi~y~~~di~~ 39 (120)
T 2kok_A 7 VTIYGIKNCDTMKKARIWLEDH------GIDYTFHDYKK 39 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH------TCCEEEEEHHH
T ss_pred EEEEECCCChHHHHHHHHHHHc------CCcEEEEeeeC
Confidence 5568899999999999888773 35666677753
No 306
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=92.75 E-value=0.12 Score=35.88 Aligned_cols=34 Identities=15% Similarity=0.271 Sum_probs=26.6
Q ss_pred EEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCC
Q 031608 101 LIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKV 140 (156)
Q Consensus 101 lV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~ 140 (156)
++.|+.++|+.|++....|++. ++.+-.+|++++
T Consensus 3 i~lY~~~~C~~C~ka~~~L~~~------gi~y~~~di~~~ 36 (132)
T 1z3e_A 3 VTLYTSPSCTSCRKARAWLEEH------EIPFVERNIFSE 36 (132)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT------TCCEEEEETTTS
T ss_pred EEEEeCCCChHHHHHHHHHHHc------CCceEEEEccCC
Confidence 5568899999999999888763 366777888654
No 307
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=91.41 E-value=0.15 Score=34.40 Aligned_cols=33 Identities=12% Similarity=0.201 Sum_probs=25.6
Q ss_pred EEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCC
Q 031608 101 LIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNK 139 (156)
Q Consensus 101 lV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~ 139 (156)
++.|+.++|+.|++....|++. ++.+-.+|+.+
T Consensus 2 i~iY~~~~C~~C~kak~~L~~~------gi~~~~~di~~ 34 (114)
T 1rw1_A 2 YVLYGIKACDTMKKARTWLDEH------KVAYDFHDYKA 34 (114)
T ss_dssp EEEEECSSCHHHHHHHHHHHHT------TCCEEEEEHHH
T ss_pred EEEEECCCChHHHHHHHHHHHC------CCceEEEeecC
Confidence 4568899999999998888762 36777788754
No 308
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=91.13 E-value=0.33 Score=33.53 Aligned_cols=38 Identities=18% Similarity=0.141 Sum_probs=26.3
Q ss_pred EEEEEeCCCChhHH------hhhHHHHHHHHHhcCCeEEEEEECCCCHHH
Q 031608 100 ILIDWMASWCRKCI------YLKPKLEKLAAEFDTKLKFYYVDVNKVSKD 143 (156)
Q Consensus 100 vlV~F~A~WC~~Ck------~~~p~l~~la~~~~~~v~~~~vd~d~~~~l 143 (156)
+|+.|+++.||.|+ +.+-.|+. . +|.|-.+|++.+++.
T Consensus 1 ~V~vYtt~~c~~c~~kk~c~~aK~lL~~----k--gV~feEidI~~d~~~ 44 (121)
T 1u6t_A 1 VIRVYIASSSGSTAIKKKQQDVLGFLEA----N--KIGFEEKDIAANEEN 44 (121)
T ss_dssp CEEEEECTTCSCHHHHHHHHHHHHHHHH----T--TCCEEEEECTTCHHH
T ss_pred CEEEEecCCCCCccchHHHHHHHHHHHH----C--CCceEEEECCCCHHH
Confidence 46778899999994 44443333 2 488999999876543
No 309
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=90.60 E-value=0.29 Score=33.39 Aligned_cols=34 Identities=12% Similarity=0.272 Sum_probs=26.3
Q ss_pred EEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCC
Q 031608 101 LIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKV 140 (156)
Q Consensus 101 lV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~ 140 (156)
+..|+.++|+.|++....|++. ++.+-.+|+.++
T Consensus 2 i~iY~~~~C~~c~ka~~~L~~~------gi~~~~~di~~~ 35 (120)
T 3l78_A 2 VTLFLSPSCTSCRKARAWLNRH------DVVFQEHNIMTS 35 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHHT------TCCEEEEETTTS
T ss_pred EEEEeCCCCHHHHHHHHHHHHc------CCCeEEEecccC
Confidence 4568899999999999888752 367777888653
No 310
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=90.57 E-value=0.64 Score=35.12 Aligned_cols=65 Identities=22% Similarity=0.292 Sum_probs=45.6
Q ss_pred EecCChhhHHHHHHHhhcCCCcEEEEEeCCCC-h--hHH-hhhHHHHHHHHHhcCC---eEEEEEECCCCHHHHHHhCC
Q 031608 78 EPINDSDHLDQILLRAQELSQPILIDWMASWC-R--KCI-YLKPKLEKLAAEFDTK---LKFYYVDVNKVSKDLVKRGN 149 (156)
Q Consensus 78 ~~i~~~~~~~~~l~~a~~~~k~vlV~F~A~WC-~--~Ck-~~~p~l~~la~~~~~~---v~~~~vd~d~~~~l~~~~~i 149 (156)
.+++ .+++.++. +.+++|.|+..-+ . .+. .+...+.++|+++.++ +.|+.+|.++...++..||+
T Consensus 117 ~e~t-~~n~~~~~------~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k~~~~~F~~~d~~~~~~~~~~fgl 188 (252)
T 2h8l_A 117 PHMT-EDNKDLIQ------GKDLLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRKTFSHELSDFGL 188 (252)
T ss_dssp CEEC-TTTHHHHS------SSSEEEEEECCBTTTBHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEETTTTHHHHGGGTC
T ss_pred eecc-cccHhhhc------CCCeEEEEeecchhhcchhHHHHHHHHHHHHHHccccCceEEEEEEchHHHHHHHHHcCC
Confidence 4454 33555542 4566666664332 1 222 4778888899999765 99999999999999999999
No 311
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=90.55 E-value=0.76 Score=34.75 Aligned_cols=68 Identities=12% Similarity=0.272 Sum_probs=50.3
Q ss_pred eEecCChhhHHHHHHHhhcCCCcEEEEEeC-CCC---hh-HHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCcc
Q 031608 77 LEPINDSDHLDQILLRAQELSQPILIDWMA-SWC---RK-CIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS 151 (156)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A-~WC---~~-Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~s 151 (156)
+.+++ .+++.++. .++++++.|+. ++. .. ...+...+.++++++. ++.|+.+|.++..+.++.+|+..
T Consensus 118 v~e~t-~~n~~~~~-----~~~~l~~~~~~~d~~~~~~~~~~~~~~~~~~vAk~~k-ki~F~~~d~~~~~~~l~~fgl~~ 190 (250)
T 3ec3_A 118 VGHRK-TSNDAKRY-----SKRPLVVVYYSVDFSFDYRTATQFWRNKVLEVAKDFP-EYTFAIADEEDYATEVKDLGLSE 190 (250)
T ss_dssp EEEEC-TTTHHHHS-----CSSSEEEEEECCCCSTTTHHHHHHHHHHHHHHHTTCT-TSEEEEEETTTTHHHHHHTTCSS
T ss_pred eeecC-ccchhhhh-----ccCccEEEEEecccccccchhHHHHHHHHHHHHHhhc-ceeEEEEcHHHHHHHHHHcCCCc
Confidence 44555 33555554 37787777775 443 44 4557899999999999 89999999999998898888863
No 312
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=90.32 E-value=0.61 Score=31.96 Aligned_cols=60 Identities=8% Similarity=0.115 Sum_probs=37.9
Q ss_pred ChhhHHHHHHHhhcCCCcEEEEEeC-----CCChhHHhhhHHHHHHHHHhcCCe-EEEEEECCCCHHHHH----HhCCcc
Q 031608 82 DSDHLDQILLRAQELSQPILIDWMA-----SWCRKCIYLKPKLEKLAAEFDTKL-KFYYVDVNKVSKDLV----KRGNIS 151 (156)
Q Consensus 82 ~~~~~~~~l~~a~~~~k~vlV~F~A-----~WC~~Ck~~~p~l~~la~~~~~~v-~~~~vd~d~~~~l~~----~~~i~s 151 (156)
+.+.+++++. +++ |+| |.- |.||.|++....|.+. ++ .+..+|+++++++-+ .-|-.+
T Consensus 9 ~~e~i~~~i~----~~~-Vvv-F~Kgt~~~P~C~fc~~ak~lL~~~------gv~~~~~~~v~~~~~~r~~l~~~sg~~T 76 (118)
T 2wul_A 9 SAEQLDALVK----KDK-VVV-FLKGTPEQPQCGFSNAVVQILRLH------GVRDYAAYNVLDDPELRQGIKDYSNWPT 76 (118)
T ss_dssp CHHHHHHHHH----HSS-EEE-EESBCSSSBSSHHHHHHHHHHHHT------TCCSCEEEETTSCHHHHHHHHHHHTCCS
T ss_pred hHHHHHHHHh----cCC-EEE-EEcCCCCCCCCHHHHHHHHHHHHh------CCcCeEeecccCCHHHHHHHHHhccCCC
Confidence 3567788884 344 443 543 5799999999887653 23 467788887765533 234445
Q ss_pred ce
Q 031608 152 VS 153 (156)
Q Consensus 152 v~ 153 (156)
||
T Consensus 77 vP 78 (118)
T 2wul_A 77 IP 78 (118)
T ss_dssp SC
T ss_pred CC
Confidence 54
No 313
>2g2q_A Glutaredoxin-2; thioredoxin-fold, oxidoreductase, poxvirus; 2.50A {Vaccinia virus}
Probab=89.93 E-value=0.73 Score=31.74 Aligned_cols=36 Identities=22% Similarity=0.487 Sum_probs=29.7
Q ss_pred CcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEEC
Q 031608 98 QPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDV 137 (156)
Q Consensus 98 k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~ 137 (156)
|.++|.|.-|.|+-|......+.++.. +..+..||+
T Consensus 2 K~tLILfGKP~C~vCe~~s~~l~~led----eY~ilrVNI 37 (124)
T 2g2q_A 2 KNVLIIFGKPYCSICENVSDAVEELKS----EYDILHVDI 37 (124)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHHTTTT----TEEEEEEEC
T ss_pred CceEEEeCCCccHHHHHHHHHHHHhhc----cccEEEEEe
Confidence 568999999999999999988855544 566888887
No 314
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=89.38 E-value=3.9 Score=30.32 Aligned_cols=63 Identities=11% Similarity=0.077 Sum_probs=42.2
Q ss_pred ChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhc--CCeEEEEEECCCCHHHHHHhCCcccee
Q 031608 82 DSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFD--TKLKFYYVDVNKVSKDLVKRGNISVSI 154 (156)
Q Consensus 82 ~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~--~~v~~~~vd~d~~~~l~~~~~i~sv~~ 154 (156)
+..+++.++.. ...+++.+.|...-|.. ..+++..+. ..+.+..++ +.+.+++++|||.++|.
T Consensus 144 ~~~~l~~~~~~--~~~~~~al~f~~~~~~~-------~~~~~~d~~~~~~i~v~~~~-~~~~~l~~~f~v~~~Ps 208 (244)
T 3q6o_A 144 XLEEIDGFFAR--NNEEYLALIFEXGGSYL-------AREVALDLSQHKGVAVRRVL-NTEANVVRKFGVTDFPS 208 (244)
T ss_dssp CHHHHHTHHHH--CCCSEEEEEEECTTCCH-------HHHHHHHTTTCTTEEEEEEE-TTCHHHHHHHTCCCSSE
T ss_pred cHHHHHHHhhc--CCCceEEEEEEECCcch-------HHHHHHHhccCCceEEEEEe-CchHHHHHHcCCCCCCe
Confidence 45688888864 55678888888765443 333444443 246665554 55789999999998875
No 315
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=88.90 E-value=0.59 Score=31.88 Aligned_cols=34 Identities=24% Similarity=0.406 Sum_probs=26.3
Q ss_pred EEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCC
Q 031608 101 LIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKV 140 (156)
Q Consensus 101 lV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~ 140 (156)
+..|+.++|+.|++....|++- ++.+-.+|+.++
T Consensus 5 i~iY~~~~C~~c~ka~~~L~~~------gi~~~~~di~~~ 38 (120)
T 3fz4_A 5 LTFYEYPKCSTCRRAKAELDDL------AWDYDAIDIKKN 38 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH------TCCEEEEETTTS
T ss_pred EEEEeCCCChHHHHHHHHHHHc------CCceEEEEeccC
Confidence 5568899999999999888753 366777888654
No 316
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=87.84 E-value=1.1 Score=32.67 Aligned_cols=39 Identities=28% Similarity=0.362 Sum_probs=31.7
Q ss_pred cEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEEC
Q 031608 99 PILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDV 137 (156)
Q Consensus 99 ~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~ 137 (156)
..|..|+-.-||.|....|.++++.+.+++++.+...-.
T Consensus 3 ~~I~~~~D~~CP~cy~~~~~l~~l~~~~~~~v~v~~~p~ 41 (208)
T 3kzq_A 3 IKLYYVHDPMCSWCWGYKPTIEKLKQQLPGVIQFEYVVG 41 (208)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHSCTTSEEEEEEC
T ss_pred eEEEEEECCCCchhhhhhHHHHHHHHhCCCCceEEEEec
Confidence 357778899999999999999999999876566655543
No 317
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=87.10 E-value=1.5 Score=37.20 Aligned_cols=63 Identities=10% Similarity=0.040 Sum_probs=42.7
Q ss_pred ChhhHHHHHHHhhcCCCcEEEEEeCCCChhHHhhhHHHHHHHHHhcC--CeEEEEEECCCCHHHHHHhCCcccee
Q 031608 82 DSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDT--KLKFYYVDVNKVSKDLVKRGNISVSI 154 (156)
Q Consensus 82 ~~~~~~~~l~~a~~~~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~--~v~~~~vd~d~~~~l~~~~~i~sv~~ 154 (156)
+.+++++++.. ...+++++.|...- .+...+++.++.. ++.+. ...+.+.+++++|||.++|.
T Consensus 144 t~~~l~~~l~~--~~~~~vallF~~~~-------s~~~~~~~ldl~~~~~v~v~-~v~~~~~~l~~kfgV~~~Ps 208 (519)
T 3t58_A 144 KLNDIDGFFTR--NKADYLALVFERED-------SYLGREVTLDLSQYHAVAVR-RVLNTESDLVNKFGVTDFPS 208 (519)
T ss_dssp CHHHHTTGGGS--CCCSEEEEEEECTT-------CCHHHHHHHHTTTCTTEEEE-EEETTCHHHHHHHTCCCSSE
T ss_pred CHHHHHHHhcc--CCCCeEEEEecCCc-------hHHHHHHHHHhhccCCeeEE-EecCchHHHHHHcCCCCCCe
Confidence 35677777753 45678888888654 3355666666653 46664 44566789999999998774
No 318
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=84.68 E-value=0.62 Score=31.76 Aligned_cols=34 Identities=12% Similarity=0.054 Sum_probs=26.0
Q ss_pred EEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCC
Q 031608 101 LIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKV 140 (156)
Q Consensus 101 lV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~ 140 (156)
+..|+.++|+.|++....|++- ++.+-.+|+.++
T Consensus 6 i~iY~~p~C~~c~ka~~~L~~~------gi~~~~~di~~~ 39 (120)
T 3gkx_A 6 TLFLQYPACSTCQKAKKWLIEN------NIEYTNRLIVDD 39 (120)
T ss_dssp CEEEECTTCHHHHHHHHHHHHT------TCCCEEEETTTT
T ss_pred EEEEECCCChHHHHHHHHHHHc------CCceEEEecccC
Confidence 5568899999999999887752 366777887553
No 319
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=81.78 E-value=4.3 Score=29.34 Aligned_cols=40 Identities=20% Similarity=0.367 Sum_probs=29.7
Q ss_pred CcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEEC
Q 031608 98 QPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDV 137 (156)
Q Consensus 98 k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~ 137 (156)
...|..|+-.-||.|....+.++++.+....++.+.....
T Consensus 7 ~~~I~~f~D~~CP~C~~~~~~~~~l~~~~~~~v~v~~~~~ 46 (216)
T 2in3_A 7 KPVLWYIADPMCSWCWGFAPVIENIRQEYSAFLTVKIMPG 46 (216)
T ss_dssp CCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred ceeEEEEECCCCchhhcchHHHHHHHhcCCCCeEEEEeec
Confidence 4567778889999999999999999874333466665544
No 320
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=81.06 E-value=0.8 Score=32.16 Aligned_cols=33 Identities=0% Similarity=-0.215 Sum_probs=25.2
Q ss_pred EEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCC
Q 031608 101 LIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNK 139 (156)
Q Consensus 101 lV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~ 139 (156)
+..|+.++|+.|++....|++- ++.+-.+|+.+
T Consensus 4 itiY~~p~C~~crkak~~L~~~------gi~~~~idi~~ 36 (141)
T 1s3c_A 4 ITIYHNPASGTSRNTLEMIRNS------GTEPTIILYLE 36 (141)
T ss_dssp CEEECCTTCHHHHHHHHHHHHT------TCCCEEECTTT
T ss_pred EEEEECCCChHHHHHHHHHHHc------CCCEEEEECCC
Confidence 3457899999999998887762 36677788765
No 321
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=79.01 E-value=0.83 Score=31.15 Aligned_cols=34 Identities=12% Similarity=0.003 Sum_probs=25.4
Q ss_pred EEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCC
Q 031608 101 LIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKV 140 (156)
Q Consensus 101 lV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~ 140 (156)
+..|+.++|+.|++....|++. ++.+-.+|+.+.
T Consensus 7 i~iY~~p~C~~c~ka~~~L~~~------gi~~~~~di~~~ 40 (121)
T 3rdw_A 7 VTIYHNPRCSKSRETLALVEQQ------GITPQVVLYLET 40 (121)
T ss_dssp CEEECCTTCHHHHHHHHHHHTT------TCCCEEECTTTS
T ss_pred EEEEECCCCHHHHHHHHHHHHc------CCCcEEEeeccC
Confidence 4557899999999998877652 366777887653
No 322
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=67.47 E-value=4 Score=27.54 Aligned_cols=32 Identities=13% Similarity=0.063 Sum_probs=23.9
Q ss_pred EEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECC
Q 031608 101 LIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVN 138 (156)
Q Consensus 101 lV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d 138 (156)
+..|+.++|+.|++....|++- ++.+-.+|+.
T Consensus 6 i~iY~~p~C~~c~ka~~~L~~~------gi~~~~~di~ 37 (119)
T 3f0i_A 6 VVIYHNPKCSKSRETLALLENQ------GIAPQVIKYL 37 (119)
T ss_dssp CEEECCTTCHHHHHHHHHHHHT------TCCCEEECHH
T ss_pred EEEEECCCChHHHHHHHHHHHc------CCceEEEEec
Confidence 4567899999999999888762 3556666664
No 323
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=61.63 E-value=14 Score=26.55 Aligned_cols=34 Identities=15% Similarity=0.259 Sum_probs=26.8
Q ss_pred EEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEE
Q 031608 100 ILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFY 133 (156)
Q Consensus 100 vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~ 133 (156)
.|..|+-.-||.|....+.++++.+.++-.|.+-
T Consensus 2 ~I~~~~D~~CP~cy~~~~~l~~~~~~~~~~v~~~ 35 (203)
T 2imf_A 2 IVDFYFDFLSPFSYLANQRLSKLAQDYGLTIRYN 35 (203)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHHCCEEEEE
T ss_pred eEEEEEeCCCHHHHHHHHHHHHHHHHcCCeEEEE
Confidence 3566778899999999999999999886333333
No 324
>1t4y_A Adaptive-response sensory-kinase SASA; alpha/beta protein, thioredoxin fold, transferase; NMR {Synechococcus elongatus} SCOP: c.47.1.15 PDB: 1t4z_A
Probab=52.24 E-value=49 Score=22.01 Aligned_cols=55 Identities=5% Similarity=0.087 Sum_probs=45.3
Q ss_pred EEEEEeCCCChhHHhhhHHHHHHHHHhc--CCeEEEEEECCCCHHHHHHhCCcccee
Q 031608 100 ILIDWMASWCRKCIYLKPKLEKLAAEFD--TKLKFYYVDVNKVSKDLVKRGNISVSI 154 (156)
Q Consensus 100 vlV~F~A~WC~~Ck~~~p~l~~la~~~~--~~v~~~~vd~d~~~~l~~~~~i~sv~~ 154 (156)
....|.|.--+..+.....+.++-+++. +.+.+--||+.++|++|+.++|...|+
T Consensus 13 L~lLyvag~tp~S~~ai~nL~~i~e~~l~~~~y~LeVIDv~eqPeLAE~~~IvATPT 69 (105)
T 1t4y_A 13 LLLQLFVDTRPLSQHIVQRVKNILAAVEATVPISLQVINVADQPQLVEYYRLVVTPA 69 (105)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHHHHHCCSSCEEEEEEETTTCHHHHHHTTCCSSSE
T ss_pred hheeeEeCCCccHHHHHHHHHHHHHHhccCCceEEEEeecccCHHHHhHcCeeeccH
Confidence 4557888888888888888888766554 368999999999999999999988765
No 325
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=40.22 E-value=22 Score=25.98 Aligned_cols=29 Identities=7% Similarity=-0.088 Sum_probs=24.2
Q ss_pred cEEEEEeCCCChhHHhhhHHHHHHHHHhc
Q 031608 99 PILIDWMASWCRKCIYLKPKLEKLAAEFD 127 (156)
Q Consensus 99 ~vlV~F~A~WC~~Ck~~~p~l~~la~~~~ 127 (156)
..|..|+-.-||.|....+.++++.++++
T Consensus 6 ~~I~~~~D~~CP~Cy~~~~~l~~l~~~~~ 34 (226)
T 1r4w_A 6 RVLELFYDVLSPYSWLGFEVLCRYQHLWN 34 (226)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHTTTSS
T ss_pred ceEEEEEeCCChHHHHHHHHHHHHHHHcC
Confidence 45667778889999999999999987663
No 326
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=39.83 E-value=46 Score=21.29 Aligned_cols=30 Identities=10% Similarity=0.266 Sum_probs=23.7
Q ss_pred eEecCChhhHHHHHHHhhcCCCcEEEEEeC
Q 031608 77 LEPINDSDHLDQILLRAQELSQPILIDWMA 106 (156)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlV~F~A 106 (156)
....++..++.+++..++.+|+|.+|.+-.
T Consensus 31 irtatssqdirdiiksmkdngkplvvfvng 60 (112)
T 2lnd_A 31 IRTATSSQDIRDIIKSMKDNGKPLVVFVNG 60 (112)
T ss_dssp EEEECSHHHHHHHHHHHTTCCSCEEEEECS
T ss_pred eeeccchhhHHHHHHHHHhcCCeEEEEecC
Confidence 344567889999999998999998886643
No 327
>1wwj_A Circadian clock protein KAIB; 1.90A {Synechocystis SP} PDB: 1r5p_A 2qke_A 1vgl_A
Probab=35.66 E-value=25 Score=23.47 Aligned_cols=58 Identities=10% Similarity=0.031 Sum_probs=45.2
Q ss_pred CCcEEEEEeCCCChhHHhhhHHHHHHHHHh-cCCeEEEEEECCCCHHHHHHhCCcccee
Q 031608 97 SQPILIDWMASWCRKCIYLKPKLEKLAAEF-DTKLKFYYVDVNKVSKDLVKRGNISVSI 154 (156)
Q Consensus 97 ~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~-~~~v~~~~vd~d~~~~l~~~~~i~sv~~ 154 (156)
...++..|-|.--+..++....+.++-+++ ++.+.+--||+.++|++|+.++|...|+
T Consensus 6 ~~~~L~LyVaG~tp~S~~ai~nL~~i~e~~l~~~y~LeVIDv~~~PelAe~~~IvAtPT 64 (105)
T 1wwj_A 6 KTYVLKLYVAGNTPNSVRALKMLKNILEQEFQGVYALKVIDVLKNPQLAEEDKILATPT 64 (105)
T ss_dssp EEEEEEEEESSCCHHHHHHHHHHHHHHHHHHTTSEEEEEEETTTCCSCCTTCEEECHHH
T ss_pred CceEEEEEEeCCCchHHHHHHHHHHHHHHhcCCCeEEEEEEcccCHhHHhHCCeEEech
Confidence 345666677778888888888888865544 5568999999999999999998876654
No 328
>3ir4_A Glutaredoxin 2; glutathione, IDP00895, structural genomics, for structural genomics of infectious diseases, csgid, oxidoreductase; HET: MSE GSH; 1.20A {Salmonella enterica subsp} PDB: 1g7o_A
Probab=30.15 E-value=50 Score=23.35 Aligned_cols=48 Identities=8% Similarity=0.106 Sum_probs=29.6
Q ss_pred EEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhCCccce
Q 031608 102 IDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNISVS 153 (156)
Q Consensus 102 V~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~i~sv~ 153 (156)
..++.++||.|.+..=.+++..- .+..+.||..+.++......--.||
T Consensus 5 ~Ly~~~~sp~~~~v~~~l~~~gi----~~~~~~v~~~~~~~~~~~~p~~~vP 52 (218)
T 3ir4_A 5 KLYIYDHCPFCVKARMIFGLKNI----PVELNVLQNDDEATPTRMIGQKMVP 52 (218)
T ss_dssp EEEECTTCHHHHHHHHHHHHHTC----CCEEEECCTTCCHHHHHHHSSSCSC
T ss_pred EEEcCCCCchHHHHHHHHHHcCC----ceEEEECCCcchhhhhhcCCCceee
Confidence 44788999999988776665422 2566667766555444333333443
No 329
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A
Probab=28.58 E-value=1.4e+02 Score=22.94 Aligned_cols=57 Identities=18% Similarity=0.233 Sum_probs=40.1
Q ss_pred hhhHHHHHHHhhcCCCcEEEEEeCCCChh-----------HHhhhHHHHHHHHHhcCCeEEEEEECCC
Q 031608 83 SDHLDQILLRAQELSQPILIDWMASWCRK-----------CIYLKPKLEKLAAEFDTKLKFYYVDVNK 139 (156)
Q Consensus 83 ~~~~~~~l~~a~~~~k~vlV~F~A~WC~~-----------Ck~~~p~l~~la~~~~~~v~~~~vd~d~ 139 (156)
.+.+++++..+.+.|-.|+|+++.+.|.. -......++.++++|++.=.++..++-.
T Consensus 94 ~~~ld~~v~~a~~~Gi~vild~h~~~~~~~~~~w~~~~~~~~~~~~~~~~ia~r~~~~p~v~~~el~N 161 (358)
T 1ece_A 94 LQVMDKIVAYAGQIGLRIILDRHRPDCSGQSALWYTSSVSEATWISDLQALAQRYKGNPTVVGFDLHN 161 (358)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEESBTTBCCSSSCCSSSCHHHHHHHHHHHHHHTTTCTTEEEEECSS
T ss_pred HHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCCCcCCCccHHHHHHHHHHHHHHhcCCCcEEEEEccc
Confidence 45678888888889999999999865531 2345667788999987642455566543
No 330
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=25.81 E-value=8.4 Score=19.50 Aligned_cols=19 Identities=32% Similarity=0.761 Sum_probs=15.8
Q ss_pred ChhHHhhhHHHHHHHHHhc
Q 031608 109 CRKCIYLKPKLEKLAAEFD 127 (156)
Q Consensus 109 C~~Ck~~~p~l~~la~~~~ 127 (156)
|+.|+..+|..+.+...|.
T Consensus 6 CpvCk~q~Pd~kt~~~H~e 24 (28)
T 2jvx_A 6 CPKCQYQAPDMDTLQIHVM 24 (28)
T ss_dssp CTTSSCEESSHHHHHHHHH
T ss_pred CccccccCcChHHHHHHHH
Confidence 9999999999888876654
No 331
>3tfg_A ALR2278 protein; heme-based sensor domain, GAS binding, signaling protein; HET: HEM; 1.90A {Nostoc SP} PDB: 3tfd_A* 3tfe_A* 3tff_A* 2o09_A* 2o0c_A* 2o0g_A* 3l6j_A* 3tf8_A* 3tf9_A* 3tfa_A*
Probab=25.73 E-value=1.6e+02 Score=20.95 Aligned_cols=42 Identities=17% Similarity=0.273 Sum_probs=34.7
Q ss_pred CCcEEEEEeCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECC
Q 031608 97 SQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVN 138 (156)
Q Consensus 97 ~k~vlV~F~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d 138 (156)
+.-+.+.++++.|+-|-.+.-.++.+|+.|+..+.+-.+.+.
T Consensus 127 ~~~l~l~Y~S~R~gl~~~~~Gli~~~A~~f~~~v~i~~~~~~ 168 (189)
T 3tfg_A 127 SKSMELHYQSTRCGLAPMVLGLLHGLGKRFQTKVEVTQTAFR 168 (189)
T ss_dssp TTEEEEEEECSSSSCHHHHHHHHHHHHHHTTCEEEEEEEECT
T ss_pred CCEEEEEEECCCCCHHHHHHHHHHHHHHHhCCCeEEEEEecc
Confidence 345788899999999999999999999998766776666654
No 332
>3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A*
Probab=25.46 E-value=1.5e+02 Score=24.44 Aligned_cols=59 Identities=15% Similarity=0.212 Sum_probs=43.0
Q ss_pred hhhHHHHHHHhhcCCCcEEEEEeCCCCh--------h---HHhhhHHHHHHHHHhcCCeEEEEEECCCCH
Q 031608 83 SDHLDQILLRAQELSQPILIDWMASWCR--------K---CIYLKPKLEKLAAEFDTKLKFYYVDVNKVS 141 (156)
Q Consensus 83 ~~~~~~~l~~a~~~~k~vlV~F~A~WC~--------~---Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~ 141 (156)
.+.+++++..+.+.|-.++|+++..-|. . =......++.++++|++.-.++..++-.+|
T Consensus 133 l~~ld~vV~~a~~~Gi~VIldlH~~~~~~~~~~W~~~~~~~~~~~~~w~~lA~ryk~~p~Vi~~eL~NEP 202 (458)
T 3qho_A 133 LQIMEKIIKKAGDLGIFVLLDYHRIGCTHIEPLWYTEDFSEEDFINTWIEVAKRFGKYWNVIGADLKNEP 202 (458)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEESSSSSCCSSSCBTTBCHHHHHHHHHHHHHHHTTSTTEEEEECSSCC
T ss_pred HHHHHHHHHHHHHCCCEEEEecccCCCccCCCccCCchhhHHHHHHHHHHHHHHhCCCCCEEEEEccCCC
Confidence 4678888988888999999999865432 1 244567789999999875566777775544
No 333
>3vhs_A ATPase wrnip1; zinc finger, ubiquitin-binding domain, ubiquitin binding, ME binding protein; 1.90A {Homo sapiens}
Probab=24.15 E-value=5.7 Score=19.74 Aligned_cols=11 Identities=27% Similarity=0.688 Sum_probs=8.7
Q ss_pred CChhHHhhhHH
Q 031608 108 WCRKCIYLKPK 118 (156)
Q Consensus 108 WC~~Ck~~~p~ 118 (156)
-||.|++++|.
T Consensus 8 qcpvcqq~mpa 18 (29)
T 3vhs_A 8 QCPVCQQMMPA 18 (29)
T ss_dssp ECTTTCCEEEG
T ss_pred eChHHHHhCcH
Confidence 48999988764
No 334
>4f03_A Glutathione transferase; GST fold; 1.80A {Phanerochaete chrysosporium} PDB: 4g19_A*
Probab=20.47 E-value=1.3e+02 Score=21.45 Aligned_cols=40 Identities=18% Similarity=0.270 Sum_probs=24.3
Q ss_pred eCCCChhHHhhhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHhC
Q 031608 105 MASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRG 148 (156)
Q Consensus 105 ~A~WC~~Ck~~~p~l~~la~~~~~~v~~~~vd~d~~~~l~~~~~ 148 (156)
..+|||.|.+..=.|... .. ....+.||..+-+......|
T Consensus 18 ~~~~SP~~~kvr~~L~~k--gi--~y~~~~v~~~~~~~~~~~~g 57 (253)
T 4f03_A 18 HSPWSPNTWKIRYALNYK--GL--KYKTEWVEYPDIAGVVQKLG 57 (253)
T ss_dssp TCCCCHHHHHHHHHHHHH--TC--CEEEEECCGGGHHHHHHHHT
T ss_pred CCCcChhHHHHHHHHHHc--CC--CCEEEEEccccchhhhhhcC
Confidence 378999999987666542 11 24556666655444444443
Done!