BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031610
(156 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O94279|MGDP1_SCHPO Putative magnesium-dependent phosphatase P8B7.31
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBP8B7.31 PE=1 SV=2
Length = 172
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 21/103 (20%)
Query: 21 LPRLVVFDLDYTLWPFYCEC------------------CYEDEIPYLYPHAKGILEALKE 62
P+ VVFDLDYTLWP + + Y EI + Y GIL+ L+
Sbjct: 7 FPKCVVFDLDYTLWPLWIDTHVTAPFKPSKNDPGVLIDKYGTEICF-YSDITGILQELRN 65
Query: 63 KGIHVAVASRSPAPDIAKTFLH--KLGIHSMFVPMVVIYMYTK 103
+ + + VASR+ AP AK L+ K+ I P + + Y K
Sbjct: 66 QKVTLCVASRTCAPKYAKQALNLMKVPIDGSLKPAIEFFTYVK 108
>sp|Q9D967|MGDP1_MOUSE Magnesium-dependent phosphatase 1 OS=Mus musculus GN=Mdp1 PE=1
SV=1
Length = 164
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 15/89 (16%)
Query: 20 NLPRLVVFDLDYTLWPFYCECCYE---------------DEIPYLYPHAKGILEALKEKG 64
LP+L VFDLDYTLWPF+ + + + LYP +L L+ G
Sbjct: 3 RLPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQNIQLYPEVPEVLGRLQSLG 62
Query: 65 IHVAVASRSPAPDIAKTFLHKLGIHSMFV 93
+ VA ASR+ A L + F+
Sbjct: 63 VPVAAASRTSEIQGANQLLELFDLGKYFI 91
>sp|Q86V88|MGDP1_HUMAN Magnesium-dependent phosphatase 1 OS=Homo sapiens GN=MDP1 PE=1
SV=1
Length = 176
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 15/89 (16%)
Query: 20 NLPRLVVFDLDYTLWPFYCECCYE---------------DEIPYLYPHAKGILEALKEKG 64
LP+L VFDLDYTLWPF+ + + + LYP +L+ L+ G
Sbjct: 3 RLPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQDVRLYPEVPEVLKRLQSLG 62
Query: 65 IHVAVASRSPAPDIAKTFLHKLGIHSMFV 93
+ A ASR+ + A L + FV
Sbjct: 63 VPGAAASRTSEIEGANQLLELFDLFRYFV 91
>sp|P40081|MGDP1_YEAST Putative magnesium-dependent phosphatase YER134C OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YER134C PE=1
SV=1
Length = 178
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 22/100 (22%)
Query: 22 PRLVVFDLDYTLWPFYCEC--------------------CYEDEIPYLYPHAKGILEALK 61
P + FDLDYT+WP YC+ C + +Y IL LK
Sbjct: 5 PDVAAFDLDYTIWPCYCDTHLHGPFKPVKSSNGEVLTIICRDGYELTIYKDIPRILGDLK 64
Query: 62 EKGIHVAVASRSPAPDIAKTFLH--KLGIHSMFVPMVVIY 99
+ G+ + ASR+ AP+IA+ L K+ + P+ ++
Sbjct: 65 DNGVKLMTASRTWAPEIAQEILKIFKVKYAGVVTPLANLF 104
>sp|Q4QMY0|GPH_HAEI8 Phosphoglycolate phosphatase OS=Haemophilus influenzae (strain
86-028NP) GN=NTHI0697 PE=3 SV=1
Length = 224
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 49 LYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVVIYMYTKDSSNA 108
LYP+ K LE LKEKG +AV + P + + L GI +F M+ +
Sbjct: 97 LYPNVKETLETLKEKGYVLAVVTNKPTRHV-QPVLAAFGIDHLFSEMLGGQSLPAIKPHP 155
Query: 109 SSSESTCAIFHFHPKR 124
+ C F F P++
Sbjct: 156 APLYYLCGKFGFEPRQ 171
>sp|P44755|GPH_HAEIN Phosphoglycolate phosphatase OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=gph PE=3 SV=1
Length = 224
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 49 LYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVVIYMYTKDSSNA 108
LYP+ K LE LKEKG +AV + P + + L GI +F M+ +
Sbjct: 97 LYPNVKETLEILKEKGYVLAVVTNKPTRHV-QPVLAAFGIDHLFSEMLGGQSLPAIKPHP 155
Query: 109 SSSESTCAIFHFHPKR 124
+ C F F P++
Sbjct: 156 APLYYLCGKFGFEPRQ 171
>sp|Q9CKJ5|GPH_PASMU Phosphoglycolate phosphatase OS=Pasteurella multocida (strain Pm70)
GN=gph PE=3 SV=1
Length = 224
Score = 34.3 bits (77), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 49 LYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVVIYMYTKDSSNA 108
LYP+ K LE LK+KG +AV + P + + L GI +F ++ +
Sbjct: 96 LYPNVKSTLETLKQKGYLLAVVTNKPTKHV-QPVLQAFGIDHLFSELLGGQSLPAIKPHP 154
Query: 109 SSSESTCAIFHFHPKR 124
+ C F +PK+
Sbjct: 155 APLYYLCGKFGLYPKQ 170
>sp|Q31VP9|GPH_SHIBS Phosphoglycolate phosphatase OS=Shigella boydii serotype 4 (strain
Sb227) GN=SBO_3372 PE=3 SV=1
Length = 252
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query: 36 FYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92
+Y E E +L+PH L AL+ KG+ + + + P P +A L L I F
Sbjct: 101 YYSEVAEEGT--FLFPHVADTLGALQAKGLPLGLVTNKPTPFVA-PLLEALDIAKYF 154
>sp|Q32AJ7|GPH_SHIDS Phosphoglycolate phosphatase OS=Shigella dysenteriae serotype 1
(strain Sd197) GN=SDY_3694 PE=3 SV=1
Length = 252
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query: 36 FYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92
+Y E E +L+PH L AL+ KG+ + + + P P +A L L I F
Sbjct: 101 YYGEVAEEGT--FLFPHVADTLGALQAKGLPLGLVTNKPTPFVA-PLLEALDIAKYF 154
>sp|Q83PX1|GPH_SHIFL Phosphoglycolate phosphatase OS=Shigella flexneri GN=SF3403 PE=3
SV=1
Length = 252
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query: 36 FYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92
+Y E E +L+PH L AL+ KG+ + + + P P +A L L I F
Sbjct: 101 YYGEVAEEGT--FLFPHVADTLGALQAKGLPLGLVTNKPTPFVAP-LLEALDIAKYF 154
>sp|P32662|GPH_ECOLI Phosphoglycolate phosphatase OS=Escherichia coli (strain K12)
GN=gph PE=1 SV=1
Length = 252
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query: 36 FYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92
+Y E E +L+PH L AL+ KG+ + + + P P +A L L I F
Sbjct: 101 YYGEVAEEGT--FLFPHVADTLGALQAKGLPLGLVTNKPTPFVAP-LLEALDIAKYF 154
>sp|Q8FCW0|GPH_ECOL6 Phosphoglycolate phosphatase OS=Escherichia coli O6:H1 (strain
CFT073 / ATCC 700928 / UPEC) GN=c4155 PE=3 SV=1
Length = 252
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query: 36 FYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92
+Y E E +L+PH L AL+ KG+ + + + P P +A L L I F
Sbjct: 101 YYGEVAEEGT--FLFPHVADTLGALQAKGLPLGLVTNKPTPFVAP-LLEALDIAKYF 154
>sp|Q3YWN8|GPH_SHISS Phosphoglycolate phosphatase OS=Shigella sonnei (strain Ss046)
GN=SSON_3516 PE=3 SV=1
Length = 252
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query: 36 FYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92
+Y E E +L+PH L AL+ KG+ + + + P P +A L L I F
Sbjct: 101 YYGEVAEEGT--FLFPHVADTLGALQAKGLPLGLVTNKPTPFVAP-LLEALDIAKYF 154
>sp|P58422|GPH_ECO57 Phosphoglycolate phosphatase OS=Escherichia coli O157:H7 GN=gph
PE=3 SV=1
Length = 252
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query: 36 FYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92
+Y E E +L+PH L AL+ KG+ + + + P P +A L L I F
Sbjct: 101 YYGEVAEEGT--FLFPHVADTLGALQAKGLPLGLVTNKPTPFVAP-LLEALDIAKYF 154
>sp|Q82ZZ8|FENR_ENTFA Ferredoxin--NADP reductase OS=Enterococcus faecalis (strain ATCC
700802 / V583) GN=EF_2899 PE=3 SV=1
Length = 336
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 25 VVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIH 66
++ +L+ + PF + C E+E+ +L A G+L KG H
Sbjct: 69 LIANLEKQMQPFQHDVCLEEEVTHLAQEADGLLRLDTTKGTH 110
>sp|Q0JD07|C3H28_ORYSJ Zinc finger CCCH domain-containing protein 28 OS=Oryza sativa
subsp. japonica GN=Os04g0438700 PE=2 SV=1
Length = 346
Score = 30.4 bits (67), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 74 PAPDIAKTFLHKLGIHSMFVPMVVIYMYTKDSSNASSSESTCAIFHFHPKRSCSI 128
P P I ++ L +G+ V M V +T+ + S++E C H P C+I
Sbjct: 163 PPPHIQESLLRSIGVEDPKVKMQVCRDFTRGRCSRSANE--CRFLHHSPLEDCAI 215
>sp|Q8R6F5|RSMH_FUSNN Ribosomal RNA small subunit methyltransferase H OS=Fusobacterium
nucleatum subsp. nucleatum (strain ATCC 25586 / CIP
101130 / JCM 8532 / LMG 13131) GN=rsmH PE=3 SV=1
Length = 314
Score = 30.4 bits (67), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 52 HAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLG 87
H++GILE L +KG+ +++ + A + +K L K G
Sbjct: 39 HSEGILERLSDKGLLISIDQDTNAIEYSKKRLEKFG 74
>sp|Q5HV17|SYV_CAMJR Valine--tRNA ligase OS=Campylobacter jejuni (strain RM1221) GN=valS
PE=3 SV=1
Length = 870
Score = 30.0 bits (66), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 39/94 (41%), Gaps = 5/94 (5%)
Query: 64 GIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVVIYMYTKDSSNASSSESTCAI-----F 118
GI ++ A +S ++ F L + + F+P + Y+Y K S + + I F
Sbjct: 650 GIELSKAEKSSVKELGSIFKEALKLLNPFMPFISEYLYHKLSDTELKTSPSIMISKYPKF 709
Query: 119 HFHPKRSCSIFMFQQVMIEMFQNRHSMLDLNSSK 152
K IF I + S++DL +SK
Sbjct: 710 KEQDKNIEKIFSLLIESIVSIRRAKSLIDLGNSK 743
>sp|Q9PPE4|SYV_CAMJE Valine--tRNA ligase OS=Campylobacter jejuni subsp. jejuni serotype
O:2 (strain NCTC 11168) GN=valS PE=3 SV=1
Length = 870
Score = 30.0 bits (66), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 39/94 (41%), Gaps = 5/94 (5%)
Query: 64 GIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVVIYMYTKDSSNASSSESTCAI-----F 118
GI ++ A +S ++ F L + + F+P + Y+Y K S + + I F
Sbjct: 650 GIELSKAEKSSVKELGSIFKEALKLLNPFMPFISEYLYHKLSDTELKTSPSIMISKYPKF 709
Query: 119 HFHPKRSCSIFMFQQVMIEMFQNRHSMLDLNSSK 152
K IF I + S++DL +SK
Sbjct: 710 KEQDKNIEKIFSLLIESIVSIRRAKSLIDLGNSK 743
>sp|Q45494|YKRA_BACSU Putative phosphatase YkrA OS=Bacillus subtilis (strain 168)
GN=ykrA PE=3 SV=1
Length = 257
Score = 30.0 bits (66), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 12/69 (17%)
Query: 23 RLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVAS-RSPAPDIAKT 81
+L+ FD+D T++ ++ IP + + L+ +G HV +AS RSP + K
Sbjct: 4 KLIFFDIDGTIYD------HDKNIP---ESTRKTVAELQRQGHHVFIASGRSPF--LVKP 52
Query: 82 FLHKLGIHS 90
L +LGIHS
Sbjct: 53 ILEELGIHS 61
>sp|Q675L4|TPSD1_PICAB Levopimaradiene synthase, chloroplastic OS=Picea abies GN=TPS-LAS
PE=2 SV=1
Length = 859
Score = 30.0 bits (66), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 9/108 (8%)
Query: 45 EIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKL-GIHSMFVPMVVIYMYTK 103
++PY P K I+E + K + P T L+ L G+ + +I + +K
Sbjct: 241 DLPYELPFIKQIIEKREAKLERLPTNILYALP---TTLLYSLEGLQEIVDWQKIIKLQSK 297
Query: 104 DSSNASSSESTCAIFHFHPKRSCSIFMFQQVMIEMFQNR---HSMLDL 148
D S SS ST A+F + C F+ +++ F N H LDL
Sbjct: 298 DGSFLSSPASTAAVFMRTGNKKCLEFL--NFVLKKFGNHVPCHYPLDL 343
>sp|Q65Q22|GPH_MANSM Phosphoglycolate phosphatase OS=Mannheimia succiniciproducens
(strain MBEL55E) GN=MS2331 PE=3 SV=1
Length = 224
Score = 29.6 bits (65), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 49 LYPHAKGILEALKEKGIHVAVASRSP 74
LYP+ K LE LKE+G +AV + P
Sbjct: 97 LYPNVKETLETLKEQGFILAVVTNKP 122
>sp|B3Q6T4|NUOB2_RHOPT NADH-quinone oxidoreductase subunit B 2 OS=Rhodopseudomonas
palustris (strain TIE-1) GN=nuoB2 PE=3 SV=1
Length = 208
Score = 29.6 bits (65), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Query: 1 MGDLEKVKNEALEIIGQFENLPRLVVFDLDYTLWP--FYCECCYEDEIPYLYP 51
M D ++ E + + F L L + ++LWP F CCY +++ L P
Sbjct: 10 MPDEQRSVEEHMALSSLFTTLEDLTAWSRKHSLWPFNFGLSCCYVEQVTVLTP 62
>sp|Q6N1Y9|NUOB2_RHOPA NADH-quinone oxidoreductase subunit B 2 OS=Rhodopseudomonas
palustris (strain ATCC BAA-98 / CGA009) GN=nuoB2 PE=3
SV=1
Length = 208
Score = 29.6 bits (65), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Query: 1 MGDLEKVKNEALEIIGQFENLPRLVVFDLDYTLWP--FYCECCYEDEIPYLYP 51
M D ++ E + + F L L + ++LWP F CCY +++ L P
Sbjct: 10 MPDEQRSVEEHMALSSLFTTLEDLTAWSRKHSLWPFNFGLSCCYVEQVTVLTP 62
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.136 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,446,103
Number of Sequences: 539616
Number of extensions: 2103390
Number of successful extensions: 6945
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 6924
Number of HSP's gapped (non-prelim): 26
length of query: 156
length of database: 191,569,459
effective HSP length: 107
effective length of query: 49
effective length of database: 133,830,547
effective search space: 6557696803
effective search space used: 6557696803
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 56 (26.2 bits)