Query 031612
Match_columns 156
No_of_seqs 54 out of 56
Neff 3.8
Searched_HMMs 13730
Date Mon Mar 25 04:04:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031612.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/031612hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2e9xa1 a.278.1.1 (A:1-144) DN 72.1 14 0.001 26.2 10.7 57 77-133 70-133 (144)
2 d1t3wa_ a.236.1.1 (A:) DNA pri 69.0 13 0.00097 24.8 8.6 81 38-119 45-130 (134)
3 d1st6a6 a.24.9.1 (A:647-718) V 68.1 6.9 0.0005 25.3 5.8 55 77-131 9-63 (72)
4 d1hx1b_ a.7.7.1 (B:) BAG-famil 66.6 7.9 0.00057 27.2 6.3 80 8-99 15-111 (112)
5 d1fioa_ a.47.2.1 (A:) Sso1 {Ba 62.8 19 0.0014 24.2 10.8 91 4-99 2-105 (196)
6 d1ykhb1 a.252.1.1 (B:2-130) RN 60.8 23 0.0017 24.6 10.6 51 38-88 75-126 (129)
7 d1s35a2 a.7.1.1 (A:1169-1273) 54.4 21 0.0015 22.1 6.3 28 49-76 36-63 (105)
8 d2b0ha1 a.24.9.2 (A:1838-1973) 47.0 36 0.0026 22.8 7.7 60 45-104 39-104 (136)
9 d1h6ga1 a.24.9.1 (A:377-507) a 45.0 28 0.0021 24.1 6.3 56 77-132 68-123 (131)
10 d1zy3a1 f.1.4.1 (A:1-170) Apop 41.1 17 0.0013 26.1 4.7 37 28-64 15-54 (170)
11 d1urua_ a.238.1.1 (A:) Amphiph 40.6 48 0.0035 22.3 10.9 74 57-130 16-90 (217)
12 d1g5ma_ f.1.4.1 (A:) Bcl-2 {Hu 40.2 4.5 0.00033 29.3 1.2 10 28-37 15-24 (164)
13 d1u5pa2 a.7.1.1 (A:1772-1872) 39.4 36 0.0026 20.5 8.7 63 6-70 26-94 (101)
14 d1hcia4 a.7.1.1 (A:633-746) al 38.3 42 0.0031 21.0 9.3 67 13-80 3-71 (114)
15 d1u5pa2 a.7.1.1 (A:1772-1872) 35.8 41 0.003 20.2 9.1 35 47-81 32-66 (101)
16 d2elba1 a.238.1.1 (A:6-273) DC 33.5 76 0.0055 22.6 10.1 73 54-126 17-93 (268)
17 d1t01a1 a.24.9.1 (A:1-125) Vin 31.6 53 0.0039 22.5 5.9 37 58-94 70-123 (125)
18 d1oxja2 a.118.1.13 (A:656-763) 30.1 79 0.0057 21.7 9.0 89 30-129 4-106 (108)
19 d1qvra2 c.37.1.20 (A:149-535) 29.6 1.1E+02 0.0082 24.0 8.4 20 26-45 254-276 (387)
20 d2spca_ a.7.1.1 (A:) Spectrin 28.8 57 0.0041 19.6 14.3 67 6-82 5-72 (107)
21 d1nexa1 a.157.1.1 (A:116-185) 27.8 27 0.002 21.8 3.3 37 77-113 29-68 (70)
22 d1t7sa_ a.7.7.1 (A:) BAG-famil 27.0 98 0.0071 21.8 12.4 96 1-99 6-126 (129)
23 g1avo.1 a.24.8.1 (A:,B:) Prote 25.9 85 0.0062 23.3 6.5 103 10-126 65-179 (200)
24 d1ppjb2 d.185.1.1 (B:236-439) 24.6 72 0.0053 21.8 5.6 51 47-97 94-147 (204)
25 d1u5pa1 a.7.1.1 (A:1662-1771) 24.2 73 0.0053 19.3 7.5 26 50-75 39-64 (110)
26 d1s35a2 a.7.1.1 (A:1169-1273) 24.1 72 0.0053 19.3 9.1 64 6-71 28-97 (105)
27 d1quua1 a.7.1.1 (A:1-124) alph 22.2 86 0.0063 19.4 8.9 62 8-71 45-112 (124)
28 d1dv5a_ a.28.1.3 (A:) apo-D-al 21.7 22 0.0016 21.8 1.9 19 90-108 41-60 (80)
29 d1cuna2 a.7.1.1 (A:116-219) Sp 21.7 81 0.0059 19.0 6.5 30 50-79 34-63 (104)
30 d1t6ca1 c.55.1.8 (A:7-132) Exo 21.5 44 0.0032 22.3 3.7 31 90-121 90-122 (126)
31 d2di4a1 a.269.1.1 (A:406-607) 21.4 77 0.0056 21.9 5.2 51 56-106 144-198 (202)
32 d1ge9a_ d.67.3.1 (A:) Ribosome 21.2 38 0.0028 24.5 3.5 33 15-47 4-36 (184)
33 d1u5ta1 a.4.5.54 (A:20-164) Va 20.8 74 0.0054 22.6 5.0 17 91-107 42-58 (145)
34 d1u6za2 c.55.1.8 (A:12-135) Ex 20.7 27 0.002 23.4 2.4 31 90-121 87-119 (124)
35 d1vcsa1 a.47.2.1 (A:8-96) Vesi 20.4 1E+02 0.0074 19.6 7.4 70 56-128 8-83 (89)
36 d1f4pa_ c.23.5.1 (A:) Flavodox 20.1 21 0.0015 24.0 1.7 23 1-23 92-114 (147)
No 1
>d2e9xa1 a.278.1.1 (A:1-144) DNA replication complex GINS protein PSF1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=72.08 E-value=14 Score=26.18 Aligned_cols=57 Identities=12% Similarity=0.122 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcC--CC-----CCChhhHHHHHhHHHHHHHHHHhhccccc
Q 031612 77 QDLIDKASAILVRNRNLVQRMQVSLD--IP-----VANESEDASFANFKQVIDEWTVQVRSRTR 133 (156)
Q Consensus 77 qel~d~ir~~L~~t~~liQ~LQ~~td--le-----plteeE~~a~~~f~~~I~ewt~~~~~~~~ 133 (156)
.+.+.|+-+=+..=+..|+.|.=..| +| -||..|.+-|.+++++|.+....++.-+|
T Consensus 70 ~RNKRCLLAY~~~R~~ri~~lrW~~g~~Lp~~~~~~Ls~~E~eyf~~Ys~lL~~Y~~~~g~~~~ 133 (144)
T d2e9xa1 70 LRNRRCTVAYLYDRLLRIRALRWEYGSVLPNALRFHMAAEEMEWFNNYKRSLATYMRSLGGDEG 133 (144)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSSCCHHHHHTSCHHHHHHHHHHHHHHHHHHHHSSSSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCCcHHHHhhCCHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 35566777777777788888876655 44 89999999999999999999877765544
No 2
>d1t3wa_ a.236.1.1 (A:) DNA primase DnaG, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=69.04 E-value=13 Score=24.78 Aligned_cols=81 Identities=11% Similarity=0.023 Sum_probs=49.5
Q ss_pred HHHhCCCCCChHHHHHHH--HHHHhhHHHHHH--HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhhcCCCCCChhhHH
Q 031612 38 FQQIYPDNANPMKLVSRI--KKVQEDLPILKE--QCRELLAAKQDLIDKASAILVRN-RNLVQRMQVSLDIPVANESEDA 112 (156)
Q Consensus 38 f~~~~pd~aNPv~Ll~rL--~~Iksr~~aL~~--q~~~l~aeKqel~d~ir~~L~~t-~~liQ~LQ~~tdleplteeE~~ 112 (156)
+.+..|+ .|+..|+++. +...+.+..|-. ...+--..+++..|++....... ..-+++|.+..--+.||++|+.
T Consensus 45 ~~~~~p~-~~t~~Lle~~r~t~~~~~L~~La~~e~~~~~~~~~~ef~d~l~~l~~~~~~~~~~~L~~k~~~~~Lt~eEk~ 123 (134)
T d1t3wa_ 45 TCLSQPG-LTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERL 123 (134)
T ss_dssp HHHTSTT-CCHHHHHHTTCSGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHTTTCCCHHHHH
T ss_pred HHHhCCC-CCHHHHHHHHcCChHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCHHHHH
Confidence 3445554 5888888877 444444444432 22233455777888887554433 4557777776555569999998
Q ss_pred HHHhHHH
Q 031612 113 SFANFKQ 119 (156)
Q Consensus 113 a~~~f~~ 119 (156)
-+..+..
T Consensus 124 eL~~L~~ 130 (134)
T d1t3wa_ 124 ELWTLNQ 130 (134)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7765543
No 3
>d1st6a6 a.24.9.1 (A:647-718) Vinculin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=68.10 E-value=6.9 Score=25.32 Aligned_cols=55 Identities=16% Similarity=0.357 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCChhhHHHHHhHHHHHHHHHHhhccc
Q 031612 77 QDLIDKASAILVRNRNLVQRMQVSLDIPVANESEDASFANFKQVIDEWTVQVRSR 131 (156)
Q Consensus 77 qel~d~ir~~L~~t~~liQ~LQ~~tdleplteeE~~a~~~f~~~I~ewt~~~~~~ 131 (156)
++.+..||.+-..-.+|.=++-..+-+=..-...+.+..+|....+.|..+|+.-
T Consensus 9 ~~~ve~i~~aa~qle~L~PQVi~AariL~~~P~sK~a~En~e~~~~~W~~~v~~l 63 (72)
T d1st6a6 9 KTTVEGIQATVKSARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKM 63 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 4556666666665555555555444433222347899999999999999999743
No 4
>d1hx1b_ a.7.7.1 (B:) BAG-family molecular chaperon regulator-1, BAG1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=66.64 E-value=7.9 Score=27.21 Aligned_cols=80 Identities=23% Similarity=0.323 Sum_probs=54.6
Q ss_pred chhhhHHHHHHHHHhhhhhHHHHHHH-HHHHHHHhCCCCCChHHHHHHHHHHHhhHHHHHHHHHHHH-------------
Q 031612 8 HNHQAIDGLVNLLTKSNHELTMVQYK-LEKEFQQIYPDNANPMKLVSRIKKVQEDLPILKEQCRELL------------- 73 (156)
Q Consensus 8 ~~~~aVd~Le~~FqKAesDLdyIq~R-LE~Ef~~~~pd~aNPv~Ll~rL~~Iksr~~aL~~q~~~l~------------- 73 (156)
.++.+|+.+..-|..-+.+|+-|++= |+.|. ..+-++++..|+.+..++|-.++
T Consensus 15 ~~ek~v~~~~kkL~~l~~eL~giekGFL~~~l------------~~ea~~kl~krik~~~E~~Mk~LE~LDsl~lp~~~~ 82 (112)
T d1hx1b_ 15 HLEKSVEKIADQLEELNKELTGIQQGFLPKDL------------QAEALCKLDRRVKATIEQFMKILEEIDTLILPENFK 82 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCSCHHH------------HHHHHHTTHHHHHHHHHHHHHHHHHHTTCCCCTTCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccchHH------------HHHHHHHHHHHHHHHHHHHHHHHHHhhhccCcHHHH
Confidence 35567777777888888888888743 33332 23445666666666666655544
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHh
Q 031612 74 ---AAKQDLIDKASAILVRNRNLVQRMQV 99 (156)
Q Consensus 74 ---aeKqel~d~ir~~L~~t~~liQ~LQ~ 99 (156)
.-.|.++++|++-|+.+=.+.+++++
T Consensus 83 ~~R~kRK~lV~~iQ~~L~q~D~l~~~i~~ 111 (112)
T d1hx1b_ 83 DSRLKRKGLVKKVQAFLAECDTVEQNICQ 111 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHcc
Confidence 44788999999999998888777653
No 5
>d1fioa_ a.47.2.1 (A:) Sso1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=62.79 E-value=19 Score=24.23 Aligned_cols=91 Identities=13% Similarity=0.138 Sum_probs=57.4
Q ss_pred CCccchhhhHHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCh---HHHHHHHHHHHhhHHHHHHHHHHHHHHH----
Q 031612 4 HNFQHNHQAIDGLVNLLTKSNHELTMVQYKLEKEFQQIYPDNANP---MKLVSRIKKVQEDLPILKEQCRELLAAK---- 76 (156)
Q Consensus 4 ~~~~~~~~aVd~Le~~FqKAesDLdyIq~RLE~Ef~~~~pd~aNP---v~Ll~rL~~Iksr~~aL~~q~~~l~aeK---- 76 (156)
|.|+.+-..|+.+..-+.+-...++-++. | ...+....+| ..+-+++..+..+...+..+|+.....-
T Consensus 2 ~d~~~f~~~v~~I~~~i~~i~~~i~~L~~-~----~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~k~~~~~~~~~~ 76 (196)
T d1fioa_ 2 HDFVGFMNKISQINRDLDKYDHTINQVDS-L----HKRLLTEVNEEQASHLRHSLDNFVAQATDLQFKLKNEIKSAQRDG 76 (196)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H----HHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHH-H----HHHhcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 55666666677666666666666555443 2 2222222233 5677888889999999999888866552
Q ss_pred ------HHHHHHHHHHHHHHHHHHHHHHh
Q 031612 77 ------QDLIDKASAILVRNRNLVQRMQV 99 (156)
Q Consensus 77 ------qel~d~ir~~L~~t~~liQ~LQ~ 99 (156)
+-..+++.+.|...+.--+..|.
T Consensus 77 ~~~~~~~~~~~~l~~~l~~~~~~f~~~q~ 105 (196)
T d1fioa_ 77 IHDTNKQAQAENSRQRFLKLIQDYRIVDS 105 (196)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33456666666666666666553
No 6
>d1ykhb1 a.252.1.1 (B:2-130) RNA polymerase II holoenzyme component SRB7 (MED21) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=60.79 E-value=23 Score=24.58 Aligned_cols=51 Identities=14% Similarity=0.264 Sum_probs=44.7
Q ss_pred HHHhCCCCC-ChHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 031612 38 FQQIYPDNA-NPMKLVSRIKKVQEDLPILKEQCRELLAAKQDLIDKASAILV 88 (156)
Q Consensus 38 f~~~~pd~a-NPv~Ll~rL~~Iksr~~aL~~q~~~l~aeKqel~d~ir~~L~ 88 (156)
+..+.|+.. .|-.=++||+++..++...-.+.++...++.++...|...|.
T Consensus 75 LI~sLP~~~~see~Q~~~i~~Le~E~~~~~~el~~~v~e~e~ll~~i~~~i~ 126 (129)
T d1ykhb1 75 LIDSLPGVDVSAEEQLRKIDMLQKKLVEVEDEKIEAIKKKEKLMRHVDSMIE 126 (129)
T ss_dssp HHHHSTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467889865 666779999999999999999999999999999999887775
No 7
>d1s35a2 a.7.1.1 (A:1169-1273) Spectrin beta chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=54.39 E-value=21 Score=22.07 Aligned_cols=28 Identities=0% Similarity=0.006 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 031612 49 MKLVSRIKKVQEDLPILKEQCRELLAAK 76 (156)
Q Consensus 49 v~Ll~rL~~Iksr~~aL~~q~~~l~aeK 76 (156)
-.|+++.+.+..++.+-..++..|...=
T Consensus 36 ~~l~k~h~~l~~~l~~~~~~v~~l~~~a 63 (105)
T d1s35a2 36 EAGIRKFEDFLGSMENNRDKVLSPVDSG 63 (105)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 3445555555555555555554444433
No 8
>d2b0ha1 a.24.9.2 (A:1838-1973) Talin 1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=47.03 E-value=36 Score=22.77 Aligned_cols=60 Identities=15% Similarity=0.141 Sum_probs=53.0
Q ss_pred CCChHHHHHHHHHHHhhHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 031612 45 NANPMKLVSRIKKVQEDLPILKEQCRELLA------AKQDLIDKASAILVRNRNLVQRMQVSLDIP 104 (156)
Q Consensus 45 ~aNPv~Ll~rL~~Iksr~~aL~~q~~~l~a------eKqel~d~ir~~L~~t~~liQ~LQ~~tdle 104 (156)
..+|-.|..--+.+-..+..|+..++..+. .|+++++.++........||+.-....+=|
T Consensus 39 ~~~~~~L~~~a~~~a~~~~~L~~~~k~~A~~~~~~~~q~~ll~~ak~v~~s~~~Lv~aak~~~~nP 104 (136)
T d2b0ha1 39 NTSPEELGPLANQLTSDYGRLASQAKPAAVAAENEEIGAHIKHRVQELGHGCSALVTKAGALQCSP 104 (136)
T ss_dssp TTCSSTHHHHHHHHHHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 347778888889999999999999999885 599999999999999999999998887755
No 9
>d1h6ga1 a.24.9.1 (A:377-507) alpha-catenin {Human (Homo sapiens) [TaxId: 9606]}
Probab=44.99 E-value=28 Score=24.12 Aligned_cols=56 Identities=14% Similarity=0.128 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCChhhHHHHHhHHHHHHHHHHhhcccc
Q 031612 77 QDLIDKASAILVRNRNLVQRMQVSLDIPVANESEDASFANFKQVIDEWTVQVRSRT 132 (156)
Q Consensus 77 qel~d~ir~~L~~t~~liQ~LQ~~tdleplteeE~~a~~~f~~~I~ewt~~~~~~~ 132 (156)
++++..|+.+-..-+.+.-++-..+-+=..-+..+.+..+|....+.|..+|+.-+
T Consensus 68 e~~v~~i~~aa~~l~~L~PQVi~Aar~l~~~P~sk~a~en~e~~~~~W~~~v~~L~ 123 (131)
T d1h6ga1 68 EEGVKLVRMSASQLEALCPQVINAALALAAKPQSKLAQENMDLFKEQWEKQVRVLT 123 (131)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHChHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566677776666666666665555331223478899999999999999997433
No 10
>d1zy3a1 f.1.4.1 (A:1-170) Apoptosis regulator Bcl-w {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.13 E-value=17 Score=26.08 Aligned_cols=37 Identities=16% Similarity=0.234 Sum_probs=21.4
Q ss_pred HHHHHHHHHHH--HHhCCCC-CChHHHHHHHHHHHhhHHH
Q 031612 28 TMVQYKLEKEF--QQIYPDN-ANPMKLVSRIKKVQEDLPI 64 (156)
Q Consensus 28 dyIq~RLE~Ef--~~~~pd~-aNPv~Ll~rL~~Iksr~~a 64 (156)
|||+|||..+= -..+|+. ..|-++...|.+|-.++..
T Consensus 15 dYi~yrL~~~G~~~~~~~~~~~~~~~~~~~Lr~vgdele~ 54 (170)
T d1zy3a1 15 DFVGYKLRQKGYVCGAGPGEGPAADPLHQAMRAAGDEFET 54 (170)
T ss_dssp HHHHHHHHHTTCCCSCCCCSCCCSCHHHHHHHHHTTHHHH
T ss_pred HHHHHHHhccCCCCCCCCCCCCchHHHHHHHHHHHHHHHH
Confidence 89999998752 1223332 3665665655555555443
No 11
>d1urua_ a.238.1.1 (A:) Amphiphysin {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=40.56 E-value=48 Score=22.31 Aligned_cols=74 Identities=7% Similarity=0.067 Sum_probs=39.1
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-CCChhhHHHHHhHHHHHHHHHHhhcc
Q 031612 57 KVQEDLPILKEQCRELLAAKQDLIDKASAILVRNRNLVQRMQVSLDIP-VANESEDASFANFKQVIDEWTVQVRS 130 (156)
Q Consensus 57 ~Iksr~~aL~~q~~~l~aeKqel~d~ir~~L~~t~~liQ~LQ~~tdle-plteeE~~a~~~f~~~I~ewt~~~~~ 130 (156)
.+..++..+..+++.|...=+..+++++..+.....+.+.|..-.+.. +..+.-...+..+..+..++...+..
T Consensus 16 ~~~~~~~~~e~~l~~l~k~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (217)
T d1urua_ 16 DHLNNFNRQQASANRLQKEFNNYIRCVRAAQAASKTLMDSVCEIYEPQWSGYDALQAQTGASESLWADFAHKLGD 90 (217)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444444444445555666666666666666676654433 33333333444555556666665543
No 12
>d1g5ma_ f.1.4.1 (A:) Bcl-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.23 E-value=4.5 Score=29.32 Aligned_cols=10 Identities=30% Similarity=0.710 Sum_probs=8.6
Q ss_pred HHHHHHHHHH
Q 031612 28 TMVQYKLEKE 37 (156)
Q Consensus 28 dyIq~RLE~E 37 (156)
|||.|||-.+
T Consensus 15 dyI~yrL~q~ 24 (164)
T d1g5ma_ 15 KYIHYKLSQR 24 (164)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHhcc
Confidence 7999999873
No 13
>d1u5pa2 a.7.1.1 (A:1772-1872) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=39.40 E-value=36 Score=20.49 Aligned_cols=63 Identities=10% Similarity=0.140 Sum_probs=34.2
Q ss_pred ccchhhhHHHHHHHHHhhhhhHHHHHHHHHH------HHHHhCCCCCChHHHHHHHHHHHhhHHHHHHHHH
Q 031612 6 FQHNHQAIDGLVNLLTKSNHELTMVQYKLEK------EFQQIYPDNANPMKLVSRIKKVQEDLPILKEQCR 70 (156)
Q Consensus 6 ~~~~~~aVd~Le~~FqKAesDLdyIq~RLE~------Ef~~~~pd~aNPv~Ll~rL~~Iksr~~aL~~q~~ 70 (156)
+|..-+.|..+...+..=+.|++-.+.+++. ++....|. ++-.+-.++..|+.++..|++.+.
T Consensus 26 ~g~d~~~~~~ll~~h~~~~~~i~~~~~~~~~l~~~~~~l~~~~~~--~~~~I~~~~~~l~~~w~~L~~~~~ 94 (101)
T d1u5pa2 26 YGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTI--GKEEIQQRLAQFVDHWKELKQLAA 94 (101)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSS--CSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC--cHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444455566666666666666666555542 33333332 334556666666666666665554
No 14
>d1hcia4 a.7.1.1 (A:633-746) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.31 E-value=42 Score=21.05 Aligned_cols=67 Identities=15% Similarity=0.126 Sum_probs=39.1
Q ss_pred HHHHHHHHHh-hhhhHHHHHHHHHHHHHHh-CCCCCChHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q 031612 13 IDGLVNLLTK-SNHELTMVQYKLEKEFQQI-YPDNANPMKLVSRIKKVQEDLPILKEQCRELLAAKQDLI 80 (156)
Q Consensus 13 Vd~Le~~FqK-AesDLdyIq~RLE~Ef~~~-~pd~aNPv~Ll~rL~~Iksr~~aL~~q~~~l~aeKqel~ 80 (156)
=|.|..-|.. |+.=..-|+.+.. .+... |.+..+=-.++++.+.+++++.+...+++.|...-++++
T Consensus 3 ~~~L~~~F~~~a~~~~~Wi~e~~~-~l~~~~~~~~~~ve~~l~~h~~~e~el~~~~~~i~~l~~~g~~L~ 71 (114)
T d1hcia4 3 NERLRRQFAAQANAIGPWIQNKME-EIARSSIQITGALEDQMNQLKQYEHNIINYKNNIDKLEGDHQLIQ 71 (114)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH-HHHSCSCTTTTSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHH-HHHhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3555555553 3333333544322 22221 212236677899999999999998888888766655443
No 15
>d1u5pa2 a.7.1.1 (A:1772-1872) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=35.79 E-value=41 Score=20.17 Aligned_cols=35 Identities=17% Similarity=0.275 Sum_probs=22.1
Q ss_pred ChHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q 031612 47 NPMKLVSRIKKVQEDLPILKEQCRELLAAKQDLID 81 (156)
Q Consensus 47 NPv~Ll~rL~~Iksr~~aL~~q~~~l~aeKqel~d 81 (156)
+=-.++++.+.++.++.+....+..|...=+++++
T Consensus 32 ~~~~ll~~h~~~~~~i~~~~~~~~~l~~~~~~l~~ 66 (101)
T d1u5pa2 32 GVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSD 66 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 33455677777777777777666666666555544
No 16
>d2elba1 a.238.1.1 (A:6-273) DCC-interacting protein 13-alpha, APPL1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.52 E-value=76 Score=22.56 Aligned_cols=73 Identities=14% Similarity=0.195 Sum_probs=46.8
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-CCChhh---HHHHHhHHHHHHHHHH
Q 031612 54 RIKKVQEDLPILKEQCRELLAAKQDLIDKASAILVRNRNLVQRMQVSLDIP-VANESE---DASFANFKQVIDEWTV 126 (156)
Q Consensus 54 rL~~Iksr~~aL~~q~~~l~aeKqel~d~ir~~L~~t~~liQ~LQ~~tdle-plteeE---~~a~~~f~~~I~ewt~ 126 (156)
.|..+..++..|+..++.+...-+.++++....-.++..+++-|..-.+.. +....+ ..++..|...+.++..
T Consensus 17 ~l~~~E~~~~~l~~~l~kl~k~~~~~~~~~~~~~~~~~~f~~~L~~~~~~~~~~~~dd~~~~~~l~~f~~~~~el~~ 93 (268)
T d2elba1 17 LLGVFEEDATAISNYMNQLYQAMHRIYDAQNELSAATHLTSKLLKEYEKQRFPLGGDDEVMSSTLQQFSKVIDELSS 93 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGSCCC-----CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccCCcHHHHHHHHHHHHHHHHHHH
Confidence 455666777777777888777777888888777777777777776544432 222111 3566677777776654
No 17
>d1t01a1 a.24.9.1 (A:1-125) Vinculin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=31.63 E-value=53 Score=22.52 Aligned_cols=37 Identities=24% Similarity=0.390 Sum_probs=26.9
Q ss_pred HHhhHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHH
Q 031612 58 VQEDLPILKEQCREL-----------------LAAKQDLIDKASAILVRNRNLV 94 (156)
Q Consensus 58 Iksr~~aL~~q~~~l-----------------~aeKqel~d~ir~~L~~t~~li 94 (156)
||.+|..-|.+++.- ...++.++...|..|.++..++
T Consensus 70 lk~eM~~A~~~vr~ag~~l~~aa~~l~~dP~s~~~R~~lV~aaR~lL~~vtrlL 123 (125)
T d1t01a1 70 LKRDMPPAFIKVENACTKLVRAAQMLQADPYSVPARDYLIDGSRGILSGTSDLL 123 (125)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHHHHHHHH
Confidence 677777777776652 2237788999999998887765
No 18
>d1oxja2 a.118.1.13 (A:656-763) RNA-binding protein Smaug {Drosophila melanogaster [TaxId: 7227]}
Probab=30.07 E-value=79 Score=21.66 Aligned_cols=89 Identities=12% Similarity=0.135 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHhCCCCCChHHHHHHHHHHHh-hHHHH---HHHHHHHHHHHHHHHHHHHHHHHH---------HH-HHHH
Q 031612 30 VQYKLEKEFQQIYPDNANPMKLVSRIKKVQE-DLPIL---KEQCRELLAAKQDLIDKASAILVR---------NR-NLVQ 95 (156)
Q Consensus 30 Iq~RLE~Ef~~~~pd~aNPv~Ll~rL~~Iks-r~~aL---~~q~~~l~aeKqel~d~ir~~L~~---------t~-~liQ 95 (156)
+=.|||.|+... ..|=...|++|+-|=- =++-. -..=++|...=-..|+.+|++|.- ++ .-++
T Consensus 4 ~L~~lEkdil~g---~g~L~~al~EL~~Iv~TPmKP~~~~~~~eeDip~qFtkVmgkvctqL~~~~v~~~Dee~l~~yl~ 80 (108)
T d1oxja2 4 ILNRVEQELLSG---QMELSTAVEELTNIVLTPMKPLESPGPPEENIGLRFLKVIDIVTNTLQQDPYAVQDDETLGVLMW 80 (108)
T ss_dssp HHHHHHHHHHTT---CSCHHHHHHHHHTTTTSCCCCTTCCSCGGGCHHHHHHHHHHHHHHHHHTCTTGGGCHHHHHHHHH
T ss_pred HHHHHHHHHHhc---cccHHHHHHHHHHHHhCCCCCCCCCCCCcccchHHHHHHHHHHHHHHhhcccCCCcHHHHHHHHH
Confidence 456889998873 2444444555544310 00000 001135666666789999998821 11 1222
Q ss_pred HHHhhcCCCCCChhhHHHHHhHHHHHHHHHHhhc
Q 031612 96 RMQVSLDIPVANESEDASFANFKQVIDEWTVQVR 129 (156)
Q Consensus 96 ~LQ~~tdleplteeE~~a~~~f~~~I~ewt~~~~ 129 (156)
=|.+..-- +||.+.+.-+.+|..||.
T Consensus 81 llek~l~h--------EAF~~~k~rL~~wK~q~~ 106 (108)
T d1oxja2 81 ILDRSIHN--------EAFMNHASQLKDLKFKLS 106 (108)
T ss_dssp HHHHHHTC--------GGGGGGHHHHHHHHHHHH
T ss_pred HHHHHHHH--------HHHHHHHHHHHHHHHHHh
Confidence 22222221 377788888889998875
No 19
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=29.61 E-value=1.1e+02 Score=23.98 Aligned_cols=20 Identities=20% Similarity=0.260 Sum_probs=10.7
Q ss_pred hHHHHHHHH---HHHHHHhCCCC
Q 031612 26 ELTMVQYKL---EKEFQQIYPDN 45 (156)
Q Consensus 26 DLdyIq~RL---E~Ef~~~~pd~ 45 (156)
+|+.+.+++ +.|....-.++
T Consensus 254 el~~ler~I~qLe~E~~aL~ke~ 276 (387)
T d1qvra2 254 EIDALERKKLQLEIEREALKKEK 276 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSCS
T ss_pred HHHHHHHHHHHHHHHHHHHHhcc
Confidence 455555544 45655555544
No 20
>d2spca_ a.7.1.1 (A:) Spectrin alpha chain {Drosophila sp. [TaxId: 7242]}
Probab=28.82 E-value=57 Score=19.62 Aligned_cols=67 Identities=10% Similarity=0.097 Sum_probs=45.0
Q ss_pred ccchhhhHHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCC-CChHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 031612 6 FQHNHQAIDGLVNLLTKSNHELTMVQYKLEKEFQQIYPDN-ANPMKLVSRIKKVQEDLPILKEQCRELLAAKQDLIDK 82 (156)
Q Consensus 6 ~~~~~~aVd~Le~~FqKAesDLdyIq~RLE~Ef~~~~pd~-aNPv~Ll~rL~~Iksr~~aL~~q~~~l~aeKqel~d~ 82 (156)
++.+...++.++.+....+.-|.. ..+|.+ .+=-.++++...++.++.+...++..|...-+.+++.
T Consensus 5 lq~F~~~~~~~~~Wl~e~e~~l~~----------~~~g~d~~~~~~l~~~h~~~~~ei~~~~~~~~~l~~~~~~L~~~ 72 (107)
T d2spca_ 5 LQLYMRDCELAESWMSAREAFLNA----------DDDANAGGNVEALIKKHEDFDKAINGHEQKIAALQTVADQLIAQ 72 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH----------HHHHCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhC----------CCCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 445566666666666554443322 345544 4777889998888888888888888877777776654
No 21
>d1nexa1 a.157.1.1 (A:116-185) Centromere DNA-binding protein complex Cbf3 subunit D, CBF3D {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=27.81 E-value=27 Score=21.76 Aligned_cols=37 Identities=14% Similarity=0.237 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHHHH--HHHHHHHhhcCCC-CCChhhHHH
Q 031612 77 QDLIDKASAILVRNR--NLVQRMQVSLDIP-VANESEDAS 113 (156)
Q Consensus 77 qel~d~ir~~L~~t~--~liQ~LQ~~tdle-plteeE~~a 113 (156)
+.|++-+|..++..+ +-..++++..|++ -.|+||++.
T Consensus 29 ~~Ll~l~c~~vA~~ikgkt~eeiR~~f~I~~D~t~eEe~~ 68 (70)
T d1nexa1 29 KPLLDAGCKVVAEMIRGRSPEEIRRTFNIVNDFTPEEEAA 68 (70)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHHTCCCCCCHHHHHT
T ss_pred HHHHHHHHHHHHHHHccCCHHHHHHHhCCCCCCCHHHHHh
Confidence 567888888876544 4478999999999 677777653
No 22
>d1t7sa_ a.7.7.1 (A:) BAG-family molecular chaperon regulator-1, BAG1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=26.96 E-value=98 Score=21.76 Aligned_cols=96 Identities=19% Similarity=0.277 Sum_probs=63.4
Q ss_pred CCCCCccchhhhHHHHHHHHHhhhhhHHHHHHHHHHHHH---HhCCCCCChHHHHHHHHHHHhhHHHHHHHHHHHH----
Q 031612 1 MGDHNFQHNHQAIDGLVNLLTKSNHELTMVQYKLEKEFQ---QIYPDNANPMKLVSRIKKVQEDLPILKEQCRELL---- 73 (156)
Q Consensus 1 ~~~~~~~~~~~aVd~Le~~FqKAesDLdyIq~RLE~Ef~---~~~pd~aNPv~Ll~rL~~Iksr~~aL~~q~~~l~---- 73 (156)
+|-.|-|.-..+.-.|+..=.+.++.+.-..-..+.|+- +.|-.. | ...+-++++..|+...-++|-.++
T Consensus 6 iGKk~~peed~~lK~L~~~Ek~v~~~~~kl~~~n~~el~giekGFL~k--~-l~~eal~kl~Krik~~~E~~Mk~LEtLD 82 (129)
T d1t7sa_ 6 MGGKNALVDDAGFKMLMQYEKHNLSNLQKAYDLNLRDVADLERGFLEK--P-KQVEMGKKLEKKVKYFNEEAERHLETLD 82 (129)
T ss_dssp ECSSSEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSCH--H-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccc--H-HHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 466677777777777776666666666555544444443 333321 2 334567777777777777776654
Q ss_pred ------------------HHHHHHHHHHHHHHHHHHHHHHHHHh
Q 031612 74 ------------------AAKQDLIDKASAILVRNRNLVQRMQV 99 (156)
Q Consensus 74 ------------------aeKqel~d~ir~~L~~t~~liQ~LQ~ 99 (156)
.-.|-++++|++-|+.+=.++.++.+
T Consensus 83 sl~l~~~~~~ee~~~~~R~kRK~LV~~iQ~~L~~~D~l~~~i~~ 126 (129)
T d1t7sa_ 83 GMNIITETTPENQAKRNREKRKTLVNGIQTLLNQNDALLRRLQE 126 (129)
T ss_dssp TEEECCCCCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhcCCcccCcHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 33678999999999999988888765
No 23
>g1avo.1 a.24.8.1 (A:,B:) Proteasome activator reg(alpha) {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.92 E-value=85 Score=23.29 Aligned_cols=103 Identities=15% Similarity=0.199 Sum_probs=65.5
Q ss_pred hhhHHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCC--CCCh------HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q 031612 10 HQAIDGLVNLLTKSNHELTMVQYKLEKEFQQIYPD--NANP------MKLVSRIKKVQEDLPILKEQCRELLAAKQDLID 81 (156)
Q Consensus 10 ~~aVd~Le~~FqKAesDLdyIq~RLE~Ef~~~~pd--~aNP------v~Ll~rL~~Iksr~~aL~~q~~~l~aeKqel~d 81 (156)
+..|-.|.......=.+|----..++.=+.-.-|- .+|- -..+++|.++++...++.+++..-..+..++++
T Consensus 65 N~~I~~l~~~vkpei~~L~e~~~~vk~WV~l~IPkiEDGNNFGV~VQe~vl~~l~~ve~~a~~~~~~i~kY~~~Rak~vs 144 (200)
T g1avo.1 65 NEKIVVLLQRLKPEIKDVIEQLNLVTTWLQLQIPRIEDGNNFGVAVQEKVFELMTSLHTKLEGFHTQISKYFSERGDAVT 144 (200)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444444444444455555556662 2222 245799999999999999999888888777666
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCC----CCChhhHHHHHhHHHHHHHHHH
Q 031612 82 KASAILVRNRNLVQRMQVSLDIP----VANESEDASFANFKQVIDEWTV 126 (156)
Q Consensus 82 ~ir~~L~~t~~liQ~LQ~~tdle----plteeE~~a~~~f~~~I~ewt~ 126 (156)
++ .+..+++ .+.|-|+..|-+++.++.|=..
T Consensus 145 K~--------------~KyP~v~DYr~~v~e~Dek~y~~lr~~v~eiRn 179 (200)
T g1avo.1 145 KA--------------AKQPHVGDYRQLVHELDEAEYRDIRLMVMEIRN 179 (200)
T ss_dssp HH--------------HHCTTBTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HH--------------hhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65 3555655 4566677788888888776443
No 24
>d1ppjb2 d.185.1.1 (B:236-439) Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [TaxId: 9913]}
Probab=24.59 E-value=72 Score=21.82 Aligned_cols=51 Identities=12% Similarity=0.109 Sum_probs=40.3
Q ss_pred ChHHHHHHHHHHHhhHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 031612 47 NPMKLVSRIKKVQEDLPILKEQ---CRELLAAKQDLIDKASAILVRNRNLVQRM 97 (156)
Q Consensus 47 NPv~Ll~rL~~Iksr~~aL~~q---~~~l~aeKqel~d~ir~~L~~t~~liQ~L 97 (156)
+|-.+.+-++.|.+++..|+.. =++|..+|..++..+-..+..+..+...+
T Consensus 94 ~~~~~~~~~~~i~~el~~l~~~~it~~eL~~aK~~l~~~~~~~~es~~~~a~~l 147 (204)
T d1ppjb2 94 QAASAGDVIKAAYNQVKTIAQGNLSNPDVQAAKNKLKAGYLMSVESSEGFLDEV 147 (204)
T ss_dssp EGGGHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHTSSHHHHHHHH
T ss_pred CcccchhHHHHHHHHHHHHhccccchHHHHHHHHHHHHhHHhccccHHHHHHHH
Confidence 8888888888898888888653 35788888888888877777777776666
No 25
>d1u5pa1 a.7.1.1 (A:1662-1771) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=24.16 E-value=73 Score=19.31 Aligned_cols=26 Identities=12% Similarity=0.341 Sum_probs=14.1
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHH
Q 031612 50 KLVSRIKKVQEDLPILKEQCRELLAA 75 (156)
Q Consensus 50 ~Ll~rL~~Iksr~~aL~~q~~~l~ae 75 (156)
.++++.+.++.++.+.+..+..|...
T Consensus 39 ~~~~~h~~~~~ei~~~~~~i~~l~~~ 64 (110)
T d1u5pa1 39 NLLKKHQLLEADISAHEDRLKDLNSQ 64 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 34555555555555555555555444
No 26
>d1s35a2 a.7.1.1 (A:1169-1273) Spectrin beta chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.12 E-value=72 Score=19.27 Aligned_cols=64 Identities=8% Similarity=0.017 Sum_probs=28.1
Q ss_pred ccchhhhHHHHHHHHHhhhhhHHHHHHHHHH------HHHHhCCCCCChHHHHHHHHHHHhhHHHHHHHHHH
Q 031612 6 FQHNHQAIDGLVNLLTKSNHELTMVQYKLEK------EFQQIYPDNANPMKLVSRIKKVQEDLPILKEQCRE 71 (156)
Q Consensus 6 ~~~~~~aVd~Le~~FqKAesDLdyIq~RLE~------Ef~~~~pd~aNPv~Ll~rL~~Iksr~~aL~~q~~~ 71 (156)
+|..-..|..|...+..=+.||.-.+.|++. ++....| ...-.+..++..|..++..|+..+++
T Consensus 28 ~g~dl~~v~~l~k~h~~l~~~l~~~~~~v~~l~~~a~~L~~~~~--~~~~~I~~~~~~l~~rw~~l~~~~~~ 97 (105)
T d1s35a2 28 PPDSLEAAEAGIRKFEDFLGSMENNRDKVLSPVDSGNKLVAEGN--LYSDKIKEKVQLIEDRHRKNNEKAQE 97 (105)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC--TTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCC--CcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444544455455555544444431 2222211 12334455555555555555554443
No 27
>d1quua1 a.7.1.1 (A:1-124) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.24 E-value=86 Score=19.44 Aligned_cols=62 Identities=13% Similarity=0.204 Sum_probs=45.1
Q ss_pred chhhhHHHHHHHHHhhhhhHHHHHHHHHH------HHHHhCCCCCChHHHHHHHHHHHhhHHHHHHHHHH
Q 031612 8 HNHQAIDGLVNLLTKSNHELTMVQYKLEK------EFQQIYPDNANPMKLVSRIKKVQEDLPILKEQCRE 71 (156)
Q Consensus 8 ~~~~aVd~Le~~FqKAesDLdyIq~RLE~------Ef~~~~pd~aNPv~Ll~rL~~Iksr~~aL~~q~~~ 71 (156)
..-.+|..+...|..=+.|+...+.|++. ++...+|+ ..-.+-+++..|..++..|+..|.+
T Consensus 45 ~d~~~v~~l~~~h~~~~~~i~~~~~~v~~l~~~~~~L~~~~~~--~~~~i~~~~~~l~~rW~~L~~~~~~ 112 (124)
T d1quua1 45 ASLTEVRALLRKHEAFESDLAAHQDRVEQIAAIAQELNELDYH--DAVNVNDRCQKICDQWDRLGTLTQK 112 (124)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCT--THHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccc--cHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45577888888888888888888888763 45555554 3457777788888888777777654
No 28
>d1dv5a_ a.28.1.3 (A:) apo-D-alanyl carrier protein {Lactobacillus casei [TaxId: 1582]}
Probab=21.74 E-value=22 Score=21.82 Aligned_cols=19 Identities=16% Similarity=0.279 Sum_probs=15.0
Q ss_pred HHHHHHHHHhhcCCC-CCCh
Q 031612 90 NRNLVQRMQVSLDIP-VANE 108 (156)
Q Consensus 90 t~~liQ~LQ~~tdle-plte 108 (156)
.++++.++++..|++ |+++
T Consensus 41 ~vel~~~ie~~fgi~i~~~~ 60 (80)
T d1dv5a_ 41 TVQLLLELQSQFGVDAPVSE 60 (80)
T ss_dssp HHHHHHHHTTTSCCCCCCSS
T ss_pred HHHHHHHHHHHHCCCCCHHH
Confidence 478888999999988 5554
No 29
>d1cuna2 a.7.1.1 (A:116-219) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=21.74 E-value=81 Score=18.98 Aligned_cols=30 Identities=20% Similarity=0.422 Sum_probs=15.2
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q 031612 50 KLVSRIKKVQEDLPILKEQCRELLAAKQDL 79 (156)
Q Consensus 50 ~Ll~rL~~Iksr~~aL~~q~~~l~aeKqel 79 (156)
.|+++.+.++.++.+-..++..|...=+++
T Consensus 34 ~ll~~h~~~~~ei~~~~~~~~~l~~~g~~L 63 (104)
T d1cuna2 34 GLLKKHEAFETDFTVHKDRVNDVCANGEDL 63 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 345555555555555555555544443333
No 30
>d1t6ca1 c.55.1.8 (A:7-132) Exopolyphosphatase Ppx {Aquifex aeolicus [TaxId: 63363]}
Probab=21.54 E-value=44 Score=22.32 Aligned_cols=31 Identities=10% Similarity=0.357 Sum_probs=24.0
Q ss_pred HHHHHHHHHhhcCCC--CCChhhHHHHHhHHHHH
Q 031612 90 NRNLVQRMQVSLDIP--VANESEDASFANFKQVI 121 (156)
Q Consensus 90 t~~liQ~LQ~~tdle--plteeE~~a~~~f~~~I 121 (156)
.-.++.++.+.+|++ .+|.+|.+-| .|.-++
T Consensus 90 ~~~~~~~i~~~tgi~i~Iisg~eEa~l-~~~gv~ 122 (126)
T d1t6ca1 90 AEEFLERVKREVGLVVEVITPEQEGRY-AYLAVA 122 (126)
T ss_dssp HHHHHHHHHHHTCCCEEECCHHHHHHH-HHHHHH
T ss_pred HHHHHHHHHHHHCCCeEEeCHHHHHHH-HHHHHH
Confidence 367889999999998 8998887766 555444
No 31
>d2di4a1 a.269.1.1 (A:406-607) Cell division protein FtsH, C-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=21.41 E-value=77 Score=21.91 Aligned_cols=51 Identities=8% Similarity=0.113 Sum_probs=39.3
Q ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHhhcCCCCC
Q 031612 56 KKVQEDLPILKEQCRELLAAKQDLIDKASAILVRNRN----LVQRMQVSLDIPVA 106 (156)
Q Consensus 56 ~~Iksr~~aL~~q~~~l~aeKqel~d~ir~~L~~t~~----liQ~LQ~~tdlepl 106 (156)
.+|+.-+...+.+++.|+.+.++.+++|...|....+ -|.+|-+..|+++.
T Consensus 144 ~ev~~ll~~a~~~a~~iL~~~~~~l~~la~~Lle~etL~~~ei~~il~~~~~~~~ 198 (202)
T d2di4a1 144 EEVKRIITEQYEKAKAIVEEYKEPLKAVVKKLLEKETITCEEFVEVFKLYGIELK 198 (202)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHSEECHHHHHHHHHHHTCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCHHHHHHHHHHCCCCCc
Confidence 3466667777999999999999999999999987543 45566667777754
No 32
>d1ge9a_ d.67.3.1 (A:) Ribosome recycling factor, RRF {Aquifex aeolicus [TaxId: 63363]}
Probab=21.20 E-value=38 Score=24.46 Aligned_cols=33 Identities=9% Similarity=0.212 Sum_probs=26.1
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCC
Q 031612 15 GLVNLLTKSNHELTMVQYKLEKEFQQIYPDNAN 47 (156)
Q Consensus 15 ~Le~~FqKAesDLdyIq~RLE~Ef~~~~pd~aN 47 (156)
.+...|..+++.++-.-..|..||.+...+.||
T Consensus 4 ~~~~i~~~~~~~m~k~i~~l~~el~~irtGRas 36 (184)
T d1ge9a_ 4 ELEDIFKEAEKDMKKAVEYYKNEIAGLRTSRAS 36 (184)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 456678888888888888999999988776443
No 33
>d1u5ta1 a.4.5.54 (A:20-164) Vacuolar sorting protein SNF8 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=20.83 E-value=74 Score=22.60 Aligned_cols=17 Identities=24% Similarity=0.206 Sum_probs=14.2
Q ss_pred HHHHHHHHhhcCCCCCC
Q 031612 91 RNLVQRMQVSLDIPVAN 107 (156)
Q Consensus 91 ~~liQ~LQ~~tdleplt 107 (156)
|...++|+...|+.||+
T Consensus 42 R~~F~~MC~~iGVDPLa 58 (145)
T d1u5ta1 42 RSKFMHMCSSIGIDPLS 58 (145)
T ss_dssp HHHHHHHHHHHTCCHHH
T ss_pred HHHHHHHHHHhCCChhh
Confidence 56677899999999885
No 34
>d1u6za2 c.55.1.8 (A:12-135) Exopolyphosphatase Ppx {Escherichia coli [TaxId: 562]}
Probab=20.67 E-value=27 Score=23.38 Aligned_cols=31 Identities=19% Similarity=0.381 Sum_probs=24.7
Q ss_pred HHHHHHHHHhhcCCC--CCChhhHHHHHhHHHHH
Q 031612 90 NRNLVQRMQVSLDIP--VANESEDASFANFKQVI 121 (156)
Q Consensus 90 t~~liQ~LQ~~tdle--plteeE~~a~~~f~~~I 121 (156)
....++++++.+|++ .||.+|.+.| .|.-+.
T Consensus 87 ~~~~~~~i~~~~gi~i~ilsg~eEa~l-~~~Gv~ 119 (124)
T d1u6za2 87 ATDFLKRAEKVIPYPIEIISGNEEARL-IFMGVE 119 (124)
T ss_dssp HHHHHHHHTTTCSSCEEECCHHHHHHH-HHHHHH
T ss_pred HHHHHHHHHHHhCCCEEEeCHHHHHHH-HHHHHH
Confidence 378999999999998 8998887666 555544
No 35
>d1vcsa1 a.47.2.1 (A:8-96) Vesicle transport v-SNARE protein Vti1-like 2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=20.41 E-value=1e+02 Score=19.61 Aligned_cols=70 Identities=14% Similarity=0.334 Sum_probs=43.0
Q ss_pred HHHHhhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCCCChhhHHHHH----hHHHHHHHHHHhh
Q 031612 56 KKVQEDLPILKEQCRELL-AAKQDLIDKASAILVRNRNLVQRMQVSL-DIPVANESEDASFA----NFKQVIDEWTVQV 128 (156)
Q Consensus 56 ~~Iksr~~aL~~q~~~l~-aeKqel~d~ir~~L~~t~~liQ~LQ~~t-dleplteeE~~a~~----~f~~~I~ewt~~~ 128 (156)
+.+.+++..-|+++..+. .+++..+..|-..|...-++|++|.--. ++|| + .+..|. +++.-++.|...+
T Consensus 8 ~~l~a~i~~kl~~i~~~~geerk~~l~~ie~~leEA~ell~qMelEvr~~p~-s--~R~~~~~klr~Yk~dl~~lk~el 83 (89)
T d1vcsa1 8 AVLTAEITSKIARVPRLPPDEKKQMVANVEKQLEEARELLEQMDLEVREIPP-Q--SRGMYSNRMRSYKQEMGKLETDF 83 (89)
T ss_dssp HHHHHHHHHHHHHGGGSCTTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCT-T--THHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCH-H--HHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444443322 3478899999999999999999986544 4554 3 454443 4555555555554
No 36
>d1f4pa_ c.23.5.1 (A:) Flavodoxin {Desulfovibrio vulgaris [TaxId: 881]}
Probab=20.12 E-value=21 Score=23.97 Aligned_cols=23 Identities=22% Similarity=0.320 Sum_probs=19.3
Q ss_pred CCCCCccchhhhHHHHHHHHHhh
Q 031612 1 MGDHNFQHNHQAIDGLVNLLTKS 23 (156)
Q Consensus 1 ~~~~~~~~~~~aVd~Le~~FqKA 23 (156)
+||..|+.+-.++..|...|++.
T Consensus 92 lGds~y~~f~~a~~~l~~~l~~l 114 (147)
T d1f4pa_ 92 CGDSSWEYFCGAVDAIEEKLKNL 114 (147)
T ss_dssp EECTTSSSTTHHHHHHHHHHHHT
T ss_pred cCCccHHHHhHHHHHHHHHHHhC
Confidence 48999999999999998877754
Done!