Query 031614
Match_columns 156
No_of_seqs 116 out of 845
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 04:07:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031614.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031614hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1jer_A Cucumber stellacyanin; 100.0 2.4E-37 8.2E-42 235.4 6.3 100 25-124 2-110 (138)
2 1ws8_A Mavicyanin; oxidized fo 100.0 3.2E-37 1.1E-41 226.2 6.2 98 26-124 2-106 (109)
3 1x9u_A Umecyanin; cupredoxin, 100.0 1.5E-36 5.3E-41 224.8 7.7 99 31-129 10-112 (116)
4 2cbp_A Cucumber basic protein; 100.0 1.8E-34 6.2E-39 207.1 6.4 85 31-121 9-96 (96)
5 1f56_A Plantacyanin; cupredoxi 100.0 6.2E-33 2.1E-37 197.4 6.9 85 30-121 4-91 (91)
6 1qhq_A Protein (auracyanin); e 99.2 2.4E-11 8.2E-16 90.1 7.1 81 32-121 27-139 (140)
7 2cal_A Rusticyanin; iron respi 99.1 7.1E-11 2.4E-15 90.1 7.0 73 48-121 62-154 (154)
8 1bxv_A Plastocyanin; copper pr 99.1 8.8E-11 3E-15 80.2 5.7 68 48-121 20-91 (91)
9 1pmy_A Pseudoazurin; electron 98.9 3.4E-09 1.2E-13 78.1 8.2 69 48-123 22-95 (123)
10 1paz_A Pseudoazurin precursor; 98.9 4.8E-09 1.6E-13 77.3 8.0 69 48-123 22-95 (123)
11 3erx_A Pseudoazurin; copper pr 98.9 6.4E-09 2.2E-13 76.8 7.4 69 48-123 22-95 (123)
12 3tu6_A Pseudoazurin (blue copp 98.8 1.2E-08 4E-13 75.8 7.9 69 48-123 24-97 (127)
13 2aan_A Auracyanin A; cupredoxi 98.8 2E-08 6.8E-13 74.2 9.1 73 48-121 36-139 (139)
14 3ef4_A Pseudoazurin, blue copp 98.8 1.5E-08 5E-13 75.1 7.5 68 48-122 23-95 (124)
15 1iuz_A Plastocyanin; electron 98.8 7.6E-09 2.6E-13 72.1 5.4 72 48-121 19-98 (98)
16 2gim_A Plastocyanin; beta shee 98.7 2.4E-08 8.2E-13 69.9 7.1 72 48-121 21-105 (106)
17 1plc_A Plastocyanin; electron 98.7 4E-08 1.4E-12 68.2 7.7 72 48-121 18-99 (99)
18 1b3i_A PETE protein, protein ( 98.7 4.3E-08 1.5E-12 67.7 7.7 72 48-121 20-97 (97)
19 1kdj_A Plastocyanin; electron 98.7 4.9E-08 1.7E-12 68.0 7.0 72 48-121 18-102 (102)
20 1byp_A Protein (plastocyanin); 98.6 1.1E-07 3.9E-12 65.8 7.6 72 48-121 18-99 (99)
21 2plt_A Plastocyanin; electron 98.6 3.3E-08 1.1E-12 68.3 4.4 72 48-121 19-98 (98)
22 1pcs_A Plastocyanin; electron 98.4 2.2E-07 7.7E-12 64.1 4.9 72 48-121 20-98 (98)
23 3c75_A Amicyanin; copper prote 98.4 8.4E-07 2.9E-11 65.5 7.7 77 31-121 53-132 (132)
24 4hci_A Cupredoxin 1; structura 98.4 3.4E-07 1.2E-11 63.9 4.4 72 31-121 21-100 (100)
25 1id2_A Amicyanin; beta barrel, 98.2 6.6E-06 2.3E-10 58.2 8.0 77 31-121 27-106 (106)
26 2ov0_A Amicyanin; beta-sandwic 98.1 1.2E-05 4E-10 56.6 7.8 79 25-121 17-105 (105)
27 2ux6_A Pseudoazurin; type-1 co 98.1 8.2E-06 2.8E-10 59.7 6.9 67 48-123 22-93 (122)
28 1cuo_A Protein (azurin ISO-2); 97.9 4.7E-05 1.6E-09 56.3 8.8 73 48-121 19-128 (129)
29 3cvb_A Plastocyanin; cupredoxi 97.9 1.9E-05 6.6E-10 54.5 6.2 70 48-121 20-104 (105)
30 3ay2_A Lipid modified azurin p 97.9 3E-05 1E-09 60.0 7.1 73 48-121 59-166 (167)
31 3czu_B Ephrin-A1; ATP-binding, 97.7 4.7E-05 1.6E-09 59.8 4.9 101 19-124 22-162 (182)
32 2iaa_C Azurin; quinoprotein, t 97.6 0.00021 7.2E-09 52.7 8.1 72 49-121 19-127 (128)
33 1iko_P Ephrin-B2; greek KEY, g 97.5 5.2E-05 1.8E-09 59.4 3.5 75 50-124 25-142 (178)
34 2ccw_A Azurin II, AZN-2; elect 97.5 0.00043 1.5E-08 51.1 8.3 72 49-121 20-128 (129)
35 1nwp_A Azurin; electron transp 97.5 0.00027 9.4E-09 52.1 7.2 73 48-121 19-128 (128)
36 2x11_B Ephrin-A5; receptor-sig 97.3 0.00021 7.1E-09 55.9 4.4 96 24-124 29-164 (177)
37 1iby_A Nitrosocyanin; RED copp 97.2 0.0005 1.7E-08 48.3 5.6 65 48-121 39-111 (112)
38 2cua_A Protein (CUA); CUA cent 97.2 0.0011 3.9E-08 49.1 7.5 65 48-122 61-135 (135)
39 3d12_B Ephrin-B3; beta propell 96.7 0.0038 1.3E-07 47.1 6.2 73 49-121 22-140 (141)
40 2wo3_B Ephrin-A2; transferase- 96.2 0.0091 3.1E-07 45.8 6.1 76 49-124 32-145 (157)
41 2vsm_B Ephrin-B2; developmenta 96.2 0.0045 1.6E-07 46.6 4.3 73 50-122 24-139 (140)
42 1shx_A Ephrin-A5; ephrin signa 96.0 0.0064 2.2E-07 45.7 4.3 72 49-123 23-134 (138)
43 3s8f_B Cytochrome C oxidase su 95.9 0.027 9.3E-07 43.3 7.4 68 47-122 93-168 (168)
44 3fsa_A Azurin; copper, cupredo 95.5 0.12 4E-06 38.1 9.3 69 49-121 20-125 (125)
45 2dv6_A Nitrite reductase; elec 95.3 0.039 1.3E-06 47.1 6.9 73 47-124 55-134 (447)
46 1fwx_A Nitrous oxide reductase 95.1 0.049 1.7E-06 49.4 7.3 67 48-123 514-593 (595)
47 3sbq_A Nitrous-oxide reductase 94.4 0.092 3.2E-06 48.0 7.3 65 48-122 559-637 (638)
48 3hei_B Ephrin-A1; EPH receptor 93.2 0.067 2.3E-06 39.8 3.5 73 49-121 22-131 (132)
49 1mzy_A Copper-containing nitri 77.3 3.7 0.00013 33.5 5.4 74 49-123 66-153 (333)
50 1oe1_A Dissimilatory copper-co 71.7 6.3 0.00022 32.0 5.5 72 49-123 67-153 (336)
51 1oe1_A Dissimilatory copper-co 71.5 2.8 9.5E-05 34.2 3.2 34 91-124 286-320 (336)
52 3l6w_A Hemocyanin 1; cupredoxi 70.6 3 0.0001 37.1 3.4 72 48-121 412-491 (491)
53 2zoo_A Probable nitrite reduct 69.2 3 0.0001 35.3 3.0 75 48-124 61-148 (442)
54 1kbv_A ANIA, major outer membr 68.8 6.7 0.00023 32.0 5.0 77 48-124 215-309 (327)
55 3kw8_A Laccase, putative coppe 68.4 11 0.00036 30.0 6.0 78 48-125 169-268 (276)
56 3gdc_A Multicopper oxidase; be 68.1 18 0.0006 28.9 7.3 76 49-124 68-156 (288)
57 1zpu_A Iron transport multicop 66.7 16 0.00054 32.0 7.3 77 48-124 35-126 (534)
58 1kbv_A ANIA, major outer membr 64.3 9.5 0.00032 31.1 5.1 76 48-124 71-158 (327)
59 1aoz_A Ascorbate oxidase; oxid 60.8 23 0.00079 30.9 7.2 77 48-124 35-125 (552)
60 1mzy_A Copper-containing nitri 60.4 5.1 0.00017 32.6 2.7 34 91-124 286-320 (333)
61 3hb3_B Cytochrome C oxidase su 59.2 8.4 0.00029 31.9 3.9 66 49-124 191-266 (298)
62 2zwn_A Two-domain type laccase 58.7 20 0.00069 29.2 6.1 77 48-124 36-128 (339)
63 2bw4_A Copper-containing nitri 57.6 15 0.00053 29.7 5.2 72 49-123 73-159 (340)
64 2gsm_B Cytochrome C oxidase su 57.0 9.8 0.00033 30.7 3.8 64 49-122 173-246 (262)
65 1cyx_A CYOA; electron transpor 57.0 9.5 0.00033 30.0 3.6 64 48-121 42-115 (205)
66 1v54_B Cytochrome C oxidase po 55.4 8.9 0.0003 30.3 3.3 64 49-122 142-215 (227)
67 3g5w_A Multicopper oxidase typ 55.4 18 0.00061 29.4 5.2 76 49-124 36-127 (318)
68 1sdd_A Coagulation factor V; c 55.3 1.9 6.6E-05 35.0 -0.7 76 48-123 216-301 (306)
69 3sqr_A Laccase; multicopper ox 52.5 35 0.0012 30.4 7.1 34 91-124 156-189 (580)
70 3t6v_A Laccase; beta barrel, o 51.6 34 0.0012 29.6 6.7 34 91-124 97-131 (495)
71 3pxl_A Laccase; 4-copper prote 51.5 35 0.0012 29.7 6.7 34 91-124 96-130 (499)
72 3gdc_A Multicopper oxidase; be 50.6 6.2 0.00021 31.6 1.6 75 48-122 196-288 (288)
73 2q9o_A Laccase-1; multicopper 45.2 50 0.0017 28.9 6.8 76 49-124 69-159 (559)
74 1fft_B Ubiquinol oxidase; elec 42.5 14 0.00048 30.7 2.6 64 48-121 152-225 (315)
75 3iuw_A Activating signal coint 42.1 10 0.00034 25.8 1.4 14 49-62 36-50 (83)
76 1v10_A Laccase; multicopper bl 42.0 53 0.0018 28.4 6.4 34 91-124 117-151 (521)
77 1hfu_A Laccase 1; oxidoreducta 33.6 60 0.0021 27.9 5.3 34 91-124 96-130 (503)
78 2zoo_A Probable nitrite reduct 31.0 37 0.0013 28.4 3.5 34 91-124 265-299 (442)
79 1yel_A AT1G16640; CESG, protei 30.7 15 0.0005 25.0 0.7 16 48-63 75-90 (104)
80 2dv6_A Nitrite reductase; elec 30.6 42 0.0014 28.0 3.8 77 48-124 340-435 (447)
81 3t9w_A Small laccase, multi-co 30.1 24 0.00082 28.4 2.1 30 95-124 260-289 (299)
82 2qcp_X Cation efflux system pr 29.8 18 0.00062 23.9 1.1 16 48-63 51-66 (80)
83 1xne_A Hypothetical protein PF 29.5 14 0.00047 26.3 0.5 12 49-60 33-44 (113)
84 2vb2_X Copper protein, cation 29.3 19 0.00064 24.3 1.1 19 45-63 56-74 (88)
85 1sdd_B Coagulation factor V; c 29.0 29 0.00099 30.8 2.6 74 48-122 240-327 (647)
86 2bw4_A Copper-containing nitri 28.9 41 0.0014 27.1 3.3 34 91-124 292-326 (340)
87 2z0t_A Putative uncharacterize 28.7 18 0.00062 25.6 1.0 11 49-59 32-42 (109)
88 2b1y_A Hypothetical protein AT 27.1 1.4 4.7E-05 31.5 -5.2 77 50-127 15-97 (104)
89 2l8d_A Lamin-B receptor; DNA b 26.1 60 0.002 21.1 3.0 44 48-95 7-54 (66)
90 2hd9_A UPF0310 protein PH1033; 24.8 22 0.00076 25.9 0.9 43 31-77 19-73 (145)
91 3cg8_A Laccase; oxidoreductase 24.7 32 0.0011 28.2 1.9 77 48-124 210-308 (343)
92 2nms_A CMRF35-like-molecule 1; 23.9 16 0.00056 24.9 -0.0 30 96-127 86-116 (124)
93 2r7e_B Coagulation factor VIII 23.6 12 0.0004 34.6 -1.0 70 48-121 369-455 (770)
94 4i1k_A B3 domain-containing tr 23.4 18 0.00063 26.4 0.2 17 48-64 114-130 (146)
95 2j5w_A Ceruloplasmin, ferroxid 23.4 44 0.0015 31.8 2.8 72 48-124 272-358 (1065)
96 2dig_A Lamin-B receptor; tudor 23.0 78 0.0027 20.6 3.1 44 48-95 10-57 (68)
97 2hzs_I RNA polymerase II media 22.8 1.1 3.8E-05 23.9 -4.8 16 48-63 4-19 (27)
98 3g5w_A Multicopper oxidase typ 22.6 77 0.0026 25.5 3.8 34 91-124 239-278 (318)
99 2l55_A SILB,silver efflux prot 22.3 28 0.00097 23.1 0.9 20 44-63 41-60 (82)
100 2r7e_B Coagulation factor VIII 22.2 71 0.0024 29.4 3.9 75 49-124 201-299 (770)
101 4he6_A Peptidase family U32; u 20.9 35 0.0012 22.4 1.2 17 48-64 27-43 (89)
102 1ed7_A Chitinase A1, (CHBD-CHI 20.6 27 0.00092 20.5 0.5 16 44-59 1-16 (45)
No 1
>1jer_A Cucumber stellacyanin; electron transport, copper, glycoprotein, hydroxylation; 1.60A {Cucumis sativus} SCOP: b.6.1.1
Probab=100.00 E-value=2.4e-37 Score=235.37 Aligned_cols=100 Identities=38% Similarity=0.762 Sum_probs=92.5
Q ss_pred hhhhhc----cCcccCCCccchhcccCCCeEEeCCEEEEeecC-CCeeEEe-CcccCCCCCCCCcc--ccCCceEEEe-C
Q 031614 25 AAAEYK----LHWIVPTSADYYTNWISNKTFEVGDSVMFNWST-THNVADV-SKSEYDDCSKTSSV--VASHPVQIQL-N 95 (156)
Q Consensus 25 ~A~~~~----~gW~~~~~~~~Y~~Wa~~~tF~vGD~L~F~y~~-~H~V~~V-~~~~y~~C~~~~~~--~~~G~~~v~L-~ 95 (156)
+|++|+ .||+++++..+|++|+++++|++||+|+|+|.+ .|+|+|| ++++|+.|+.++++ +++|+++|+| +
T Consensus 2 ~a~~~~VGg~~GW~~~~~~~~Y~~Wa~~~~F~vGD~LvF~y~~~~HsV~~V~~~~~y~~C~~s~p~~~~~~G~~~v~L~~ 81 (138)
T 1jer_A 2 QSTVHIVGDNTGWSVPSSPNFYSQWAAGKTFRVGDSLQFNFPANAHNVHEMETKQSFDACNFVNSDNDVERTSPVIERLD 81 (138)
T ss_dssp CCCEEETTGGGCSSCCSSTTHHHHHHHTCCEETTCEEEECCCTTTCCCEEESCHHHHHHTCCTTSCCCCCCCSCEEEECC
T ss_pred CceEEEECCcCcCcCCCCccchhhhhcCCcCcCCCEEEEeecCCCceEEEeCchhhcCccCCCCccccccCCCeEEEecc
Confidence 467777 789999544569999999999999999999997 7999999 99999999999998 8999999999 9
Q ss_pred CcccEEEEcCCCCCcCCCCeEEEEecCCC
Q 031614 96 STGSRYFICTVDDHCGRGQKLAITVKNSG 124 (156)
Q Consensus 96 ~~G~~YFiC~v~~hC~~GmKl~I~V~~~~ 124 (156)
++|++||||++++||++||||+|+|.+..
T Consensus 82 ~~G~~YFicg~~gHC~~GmKl~I~V~~~~ 110 (138)
T 1jer_A 82 ELGMHYFVCTVGTHCSNGQKLSINVVAAN 110 (138)
T ss_dssp SSEEEEEECCSTTTGGGTCEEEEEEECCC
T ss_pred CCcCEEEEcCCCCccccCCEEEEEEcCCC
Confidence 99999999999999999999999998765
No 2
>1ws8_A Mavicyanin; oxidized form, phytocyanin, cupredoxin, electron transport; 1.60A {Cucurbita pepo} SCOP: b.6.1.1 PDB: 1ws7_A
Probab=100.00 E-value=3.2e-37 Score=226.15 Aligned_cols=98 Identities=34% Similarity=0.668 Sum_probs=89.2
Q ss_pred hhhhc----cCcccCCCccchhcccCCCeEEeCCEEEEeecC-CCeeEEeCcccCCCCCCCCcc--ccCCceEEEeCCcc
Q 031614 26 AAEYK----LHWIVPTSADYYTNWISNKTFEVGDSVMFNWST-THNVADVSKSEYDDCSKTSSV--VASHPVQIQLNSTG 98 (156)
Q Consensus 26 A~~~~----~gW~~~~~~~~Y~~Wa~~~tF~vGD~L~F~y~~-~H~V~~V~~~~y~~C~~~~~~--~~~G~~~v~L~~~G 98 (156)
|++|+ .||++++ ..+|++|+++++|++||+|+|+|.+ .|+|+||++++|+.|+.++|+ +++|+++|+|+++|
T Consensus 2 a~~~~VG~~~GW~~~~-~~~Y~~Wa~~~~F~vGD~LvF~y~~~~hsV~~V~~~~y~~C~~~~p~~~~~~G~~~v~L~~~G 80 (109)
T 1ws8_A 2 ATVHKVGDSTGWTTLV-PYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSSSPAASYTSGADSIPLKRPG 80 (109)
T ss_dssp CCEEETTGGGCSCSSS-CCCHHHHHHTSCBCTTCEEEEECCTTTCCEEEECHHHHHHTCCSSCSEEECSSEEEEECCSSE
T ss_pred CcEEEeCCCCCccCCC-CcChhHhhcCCcCcCCCEEEEeecCCCceEEEEChHHCCcccCCCcccccCCCCEEEEECCCc
Confidence 56777 7999983 2339999999999999999999998 699999999999999999998 89999999999999
Q ss_pred cEEEEcCCCCCcCCCCeEEEEecCCC
Q 031614 99 SRYFICTVDDHCGRGQKLAITVKNSG 124 (156)
Q Consensus 99 ~~YFiC~v~~hC~~GmKl~I~V~~~~ 124 (156)
++||||++++||++||||+|+|.+++
T Consensus 81 ~~yFic~~~gHC~~GmKl~I~V~~~~ 106 (109)
T 1ws8_A 81 TFYFLCGIPGHCQLGQKVEIKVDPGS 106 (109)
T ss_dssp EEEEECCSTTTTTTTCEEEEEECC--
T ss_pred CEEEECCCCCcccCCCEEEEEEcCCC
Confidence 99999999999999999999998753
No 3
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=100.00 E-value=1.5e-36 Score=224.78 Aligned_cols=99 Identities=41% Similarity=0.899 Sum_probs=86.6
Q ss_pred cCcccCCCccchhcccCCCeEEeCCEEEEeecC-CCeeEEeCcccCCCCCCCCcc--ccCCceEEEeCCcccEEEEcCCC
Q 031614 31 LHWIVPTSADYYTNWISNKTFEVGDSVMFNWST-THNVADVSKSEYDDCSKTSSV--VASHPVQIQLNSTGSRYFICTVD 107 (156)
Q Consensus 31 ~gW~~~~~~~~Y~~Wa~~~tF~vGD~L~F~y~~-~H~V~~V~~~~y~~C~~~~~~--~~~G~~~v~L~~~G~~YFiC~v~ 107 (156)
.||+++.+..+|++|+++++|++||+|+|+|.+ .|+|+||++++|+.|+.++++ +++|++.|+|+++|++||||+++
T Consensus 10 ~GW~~~~~~~~Y~~Wa~~~~f~vGD~L~F~y~~~~HsV~~V~~~~y~~C~~~~~~~~~~~G~~~v~l~~~G~~yFic~~~ 89 (116)
T 1x9u_A 10 MEWKRPSDPKFYITWATGKTFRVGDELEFDFAAGMHDVAVVTKDAFDNCKKENPISHMTTPPVKIMLNTTGPQYYICTVG 89 (116)
T ss_dssp GCSSCCSSTTHHHHHHTTCCEETTCEEEECCCTTTCCEEEECHHHHHTTCCSSCSEEECSSSEEEECCSCEEEEEECCST
T ss_pred CcCcCCCCCcchhhccccccCcCCCEEEEEecCCCCeEEEEChhhcCccCCCCCccccCCCCeEEEECCCCCEEEECCCC
Confidence 699997544569999999999999999999998 799999999999999999998 89999999999999999999999
Q ss_pred CCcCCCCeEEE-EecCCCCCCCC
Q 031614 108 DHCGRGQKLAI-TVKNSGNDTSS 129 (156)
Q Consensus 108 ~hC~~GmKl~I-~V~~~~~~~~a 129 (156)
+||++|||++| +|.++++++++
T Consensus 90 ~HC~~Gmkl~In~V~~~~~~~~~ 112 (116)
T 1x9u_A 90 DHCRVGQKLSINVVGAGGAGGGA 112 (116)
T ss_dssp TTTTTTCEEEEEEECC-------
T ss_pred CccccCCEEEEEEECCCCCCCCC
Confidence 99999999999 88776544333
No 4
>2cbp_A Cucumber basic protein; electron transport, phytocyanin, type 1 copper protein; 1.80A {Cucumis sativus} SCOP: b.6.1.1
Probab=100.00 E-value=1.8e-34 Score=207.09 Aligned_cols=85 Identities=32% Similarity=0.680 Sum_probs=81.1
Q ss_pred cCcccCCCccchhcccCCCeEEeCCEEEEeecC-CCeeEEeCcccCCCCCCCCcc--ccCCceEEEeCCcccEEEEcCCC
Q 031614 31 LHWIVPTSADYYTNWISNKTFEVGDSVMFNWST-THNVADVSKSEYDDCSKTSSV--VASHPVQIQLNSTGSRYFICTVD 107 (156)
Q Consensus 31 ~gW~~~~~~~~Y~~Wa~~~tF~vGD~L~F~y~~-~H~V~~V~~~~y~~C~~~~~~--~~~G~~~v~L~~~G~~YFiC~v~ 107 (156)
.||++ + |++|+++++|++||+|+|+|.+ .|+|+||++++|+.|+.++|+ +++|++.|+| ++|++||||+++
T Consensus 9 ~GW~~--~---y~~Wa~~~~f~vGD~L~F~y~~~~hsV~~v~~~~y~~C~~~~~~~~~~~G~~~v~L-~~g~~yFic~~~ 82 (96)
T 2cbp_A 9 GGWTF--N---TESWPKGKRFRAGDILLFNYNPSMHNVVVVNQGGFSTCNTPAGAKVYTSGRDQIKL-PKGQSYFICNFP 82 (96)
T ss_dssp GCSCS--S---CTTTTTTCCBCTTCEEEEECCTTTCCEEEECHHHHHHTCCCTTCEEECSSEEEEEC-CSEEEEEECCST
T ss_pred CCCcc--C---hhhhccCceEcCCCEEEEEecCCCCEEEEECHHHCCccCCCCCcccccCCCeEEEe-cCCCEEEEcCCC
Confidence 68997 4 8999999999999999999998 799999999999999999998 8999999999 899999999999
Q ss_pred CCcCCCCeEEEEec
Q 031614 108 DHCGRGQKLAITVK 121 (156)
Q Consensus 108 ~hC~~GmKl~I~V~ 121 (156)
+||++|||++|+|+
T Consensus 83 ~HC~~Gmkl~I~Vl 96 (96)
T 2cbp_A 83 GHCQSGMKIAVNAL 96 (96)
T ss_dssp TTGGGTCEEEEEEC
T ss_pred CccccCCEEEEEEC
Confidence 99999999999985
No 5
>1f56_A Plantacyanin; cupredoxin, copper protein, beta barrel, plant protein; 2.05A {Spinacia oleracea} SCOP: b.6.1.1
Probab=99.97 E-value=6.2e-33 Score=197.44 Aligned_cols=85 Identities=35% Similarity=0.699 Sum_probs=79.6
Q ss_pred ccCcccCCCccchhcccCCCeEEeCCEEEEeecC-CCeeEEeCcccCCCCCCCCcc--ccCCceEEEeCCcccEEEEcCC
Q 031614 30 KLHWIVPTSADYYTNWISNKTFEVGDSVMFNWST-THNVADVSKSEYDDCSKTSSV--VASHPVQIQLNSTGSRYFICTV 106 (156)
Q Consensus 30 ~~gW~~~~~~~~Y~~Wa~~~tF~vGD~L~F~y~~-~H~V~~V~~~~y~~C~~~~~~--~~~G~~~v~L~~~G~~YFiC~v 106 (156)
+-||+++ ++|+++++|++||+|+|+|.+ +|+|+||++++|+.|+.++|+ +++|++.|+|+ +|++||||++
T Consensus 4 ~VgW~~~------~~Wa~~~~f~vGD~L~F~y~~~~hsV~~v~~~~y~~C~~~~~~~~~~~G~~~v~L~-~g~~yFic~~ 76 (91)
T 1f56_A 4 NIGWSFN------VNGARGKSFRAGDVLVFKYIKGQHNVVAVNGRGYASCSAPRGARTYSSGQDRIKLT-RGQNYFICSF 76 (91)
T ss_dssp EEECSSS------CBSCTTCCBCTTCEEEEECCBTTBCEEEECHHHHHTTCCCTTCEEECSSEEEEECC-SEEEEEECCS
T ss_pred EEeCCCC------CcCcCCccEeCCCEEEEEccCCCCeEEEECHHHcCCcCCCCCcccccCCCcEEEeC-CCCeEEEcCC
Confidence 3489987 599999999999999999998 799999999999999999998 89999999996 8999999999
Q ss_pred CCCcCCCCeEEEEec
Q 031614 107 DDHCGRGQKLAITVK 121 (156)
Q Consensus 107 ~~hC~~GmKl~I~V~ 121 (156)
++||++|||++|+|.
T Consensus 77 ~~HC~~Gmkl~I~v~ 91 (91)
T 1f56_A 77 PGHCGGGMKIAINAK 91 (91)
T ss_dssp TTTTTTTCEEEEEEC
T ss_pred CCccccCCEEEEEEC
Confidence 999999999999984
No 6
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=99.21 E-value=2.4e-11 Score=90.10 Aligned_cols=81 Identities=17% Similarity=0.297 Sum_probs=57.7
Q ss_pred CcccCCCccchhcccCCCeEEeCCEEEEeecC------CCeeEEeCcc-cCCC--------------C---CCCC-----
Q 031614 32 HWIVPTSADYYTNWISNKTFEVGDSVMFNWST------THNVADVSKS-EYDD--------------C---SKTS----- 82 (156)
Q Consensus 32 gW~~~~~~~~Y~~Wa~~~tF~vGD~L~F~y~~------~H~V~~V~~~-~y~~--------------C---~~~~----- 82 (156)
+|.+.++ ..+++.||+++|++.+ .|+++..+.. ++.. . +..+
T Consensus 27 ~~~F~P~---------~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t 97 (140)
T 1qhq_A 27 ALAFAQT---------SLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWT 97 (140)
T ss_dssp SSSBSCS---------EEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEEC
T ss_pred CceEeCC---------eEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccc
Confidence 4777665 5899999999988854 4999887422 1111 0 1011
Q ss_pred ccccC---CceEEEeCCcccEEEEcCCCCCcCCCCeEEEEec
Q 031614 83 SVVAS---HPVQIQLNSTGSRYFICTVDDHCGRGQKLAITVK 121 (156)
Q Consensus 83 ~~~~~---G~~~v~L~~~G~~YFiC~v~~hC~~GmKl~I~V~ 121 (156)
..... +...|+++++|.|+|+|++++||..|||..|+|.
T Consensus 98 ~~l~pG~~~~~~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 98 AMLNAGESGSVTFRTPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp CCBCTTEEEEEEEECCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred eeeCCCceeEEEEEeCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 11233 3446888899999999999999999999999996
No 7
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=99.14 E-value=7.1e-11 Score=90.09 Aligned_cols=73 Identities=15% Similarity=0.257 Sum_probs=57.8
Q ss_pred CCeEEeCCEEEEeecC-----CCeeEEe-CcccCCCCCCCCcc---------ccCCc---e--EEEeCCcccEEEEcCCC
Q 031614 48 NKTFEVGDSVMFNWST-----THNVADV-SKSEYDDCSKTSSV---------VASHP---V--QIQLNSTGSRYFICTVD 107 (156)
Q Consensus 48 ~~tF~vGD~L~F~y~~-----~H~V~~V-~~~~y~~C~~~~~~---------~~~G~---~--~v~L~~~G~~YFiC~v~ 107 (156)
..++++||+|+|++.+ .|++..+ ....|+.|.....+ ...|. . +|++ +||+|||+|+.+
T Consensus 62 ~i~V~~GD~V~~~~tN~~~~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~t~tft~-~pGtY~y~C~~~ 140 (154)
T 2cal_A 62 TLEIPAGATVDVTFINTNKGFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYTDFTWHP-TAGTYYYVCQIP 140 (154)
T ss_dssp EEEECTTCEEEEEEEECCTTCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEEEEEECC-CSEEEEEECCST
T ss_pred EEEEeCCCEEEEEEEcCCCCeeeEEEEeecCcchhccccccccccccccccccCCCCceEEEEEEEE-CCceEEEECCCC
Confidence 4788999999999964 3999999 45678888765433 12333 3 5677 999999999999
Q ss_pred CCcCCCCeEEEEec
Q 031614 108 DHCGRGQKLAITVK 121 (156)
Q Consensus 108 ~hC~~GmKl~I~V~ 121 (156)
+||..|||..|.|.
T Consensus 141 gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 141 GMAATGMFGKIVVK 154 (154)
T ss_dssp TTGGGTCEEEEEEC
T ss_pred CHHHCCCEEEEEEC
Confidence 99999999999884
No 8
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=99.11 E-value=8.8e-11 Score=80.15 Aligned_cols=68 Identities=21% Similarity=0.364 Sum_probs=52.5
Q ss_pred CCeEEeCCEEEEeecC--CCeeEEeCcccCCCCCCCCcc-ccCC-ceEEEeCCcccEEEEcCCCCCcCCCCeEEEEec
Q 031614 48 NKTFEVGDSVMFNWST--THNVADVSKSEYDDCSKTSSV-VASH-PVQIQLNSTGSRYFICTVDDHCGRGQKLAITVK 121 (156)
Q Consensus 48 ~~tF~vGD~L~F~y~~--~H~V~~V~~~~y~~C~~~~~~-~~~G-~~~v~L~~~G~~YFiC~v~~hC~~GmKl~I~V~ 121 (156)
..++++||++.|++.. .|+|...+..++. .... ...| ..++++++||.|+|+|+ .||..||+..|+|.
T Consensus 20 ~i~v~~Gd~V~~~n~~~~~H~v~~~~~~~~~----~~~~~~~~g~~~~~~f~~~G~y~~~C~--~H~~~gM~g~i~V~ 91 (91)
T 1bxv_A 20 TIEIQAGDTVQWVNNKLAPHNVVVEGQPELS----HKDLAFSPGETFEATFSEPGTYTYYCE--PHRGAGMVGKIVVQ 91 (91)
T ss_dssp EEEECTTCEEEEEECSSCCEEEEETTCGGGC----EEEEECSTTCEEEEECCSCEEEEEECT--TTGGGTCEEEEEEC
T ss_pred EEEECCCCEEEEEECCCCCcEEEEeCCCccC----cccceeCCCCEEEEEeCCCEEEEEEeC--CCccCCCEEEEEEC
Confidence 4789999999999875 5999876533221 1112 4445 45789999999999999 89999999999984
No 9
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=98.93 E-value=3.4e-09 Score=78.05 Aligned_cols=69 Identities=19% Similarity=0.276 Sum_probs=53.5
Q ss_pred CCeEEeCCEEEEeecC-CCeeEEeCcccCCCCCCCCcc---ccCCc-eEEEeCCcccEEEEcCCCCCcCCCCeEEEEecC
Q 031614 48 NKTFEVGDSVMFNWST-THNVADVSKSEYDDCSKTSSV---VASHP-VQIQLNSTGSRYFICTVDDHCGRGQKLAITVKN 122 (156)
Q Consensus 48 ~~tF~vGD~L~F~y~~-~H~V~~V~~~~y~~C~~~~~~---~~~G~-~~v~L~~~G~~YFiC~v~~hC~~GmKl~I~V~~ 122 (156)
..++++||+|.|.+.+ .|+|+..+ .|.+.+.. ...|. .+++++++|.|.|+|+ .||..||+..|+|.+
T Consensus 22 ~i~V~~GdtV~f~n~~~~H~v~~~~-----~~~p~~~~~~~~~pG~t~~~tF~~~G~y~y~C~--~H~~~gM~G~I~V~~ 94 (123)
T 1pmy_A 22 LVRLKPGDSIKFLPTDKGHNVETIK-----GMAPDGADYVKTTVGQEAVVKFDKEGVYGFKCA--PHYMMGMVALVVVGD 94 (123)
T ss_dssp EEEECTTCEEEEECSSSSCCCEECT-----TSSCTTCCCCBCCTTSCEEEECCSCEEEEEECS--TTTTTTCEEEEEESS
T ss_pred EEEECCCCEEEEEECCCCcEEEEec-----ccCCCCccceecCCCCEEEEEeCCCeEEEEEeC--CccccCCEEEEEEcC
Confidence 4789999999999987 79998652 23332221 23343 4789999999999998 599999999999986
Q ss_pred C
Q 031614 123 S 123 (156)
Q Consensus 123 ~ 123 (156)
+
T Consensus 95 ~ 95 (123)
T 1pmy_A 95 K 95 (123)
T ss_dssp C
T ss_pred C
Confidence 4
No 10
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=98.89 E-value=4.8e-09 Score=77.26 Aligned_cols=69 Identities=23% Similarity=0.294 Sum_probs=53.2
Q ss_pred CCeEEeCCEEEEeecC-CCeeEEeCcccCCCCCCCCc--c-ccCCc-eEEEeCCcccEEEEcCCCCCcCCCCeEEEEecC
Q 031614 48 NKTFEVGDSVMFNWST-THNVADVSKSEYDDCSKTSS--V-VASHP-VQIQLNSTGSRYFICTVDDHCGRGQKLAITVKN 122 (156)
Q Consensus 48 ~~tF~vGD~L~F~y~~-~H~V~~V~~~~y~~C~~~~~--~-~~~G~-~~v~L~~~G~~YFiC~v~~hC~~GmKl~I~V~~ 122 (156)
..++++||++.|.+.+ .|+|+.. +.|.+.+. . ...|. .+++++++|.|.|+|+ .||..||+..|+|.+
T Consensus 22 ~i~V~~GdtV~f~~~~~~H~v~~~-----~~~~p~~~~~~~~~pG~t~~~tF~~~G~y~y~C~--~H~~~gM~G~I~V~~ 94 (123)
T 1paz_A 22 YIKANPGDTVTFIPVDKGHNVESI-----KDMIPEGAEKFKSKINENYVLTVTQPGAYLVKCT--PHYAMGMIALIAVGD 94 (123)
T ss_dssp EEEECTTCEEEEEESSSSCCCEEC-----TTCSCTTCCCCBCCTTCCEEEECCSCEEEEEECT--TTGGGTCEEEEEESS
T ss_pred EEEECCCCEEEEEECCCCeEEEEe-----cccCCCCccceecCCCCEEEEEeCCCEEEEEEeC--CcccCCCEEEEEEcC
Confidence 5789999999999988 7999864 12333222 1 22343 3789999999999998 599999999999986
Q ss_pred C
Q 031614 123 S 123 (156)
Q Consensus 123 ~ 123 (156)
+
T Consensus 95 ~ 95 (123)
T 1paz_A 95 S 95 (123)
T ss_dssp S
T ss_pred C
Confidence 3
No 11
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=98.85 E-value=6.4e-09 Score=76.78 Aligned_cols=69 Identities=20% Similarity=0.235 Sum_probs=53.6
Q ss_pred CCeEEeCCEEEEeecC-CCeeEEeCcccCCCCCCCCcc---ccCCc-eEEEeCCcccEEEEcCCCCCcCCCCeEEEEecC
Q 031614 48 NKTFEVGDSVMFNWST-THNVADVSKSEYDDCSKTSSV---VASHP-VQIQLNSTGSRYFICTVDDHCGRGQKLAITVKN 122 (156)
Q Consensus 48 ~~tF~vGD~L~F~y~~-~H~V~~V~~~~y~~C~~~~~~---~~~G~-~~v~L~~~G~~YFiC~v~~hC~~GmKl~I~V~~ 122 (156)
..++++||++.|.+.+ .|+|...+. +.+.+.. ...|. .++++++||.|+|+|. .||..||+-.|+|.+
T Consensus 22 ~i~V~~GdtV~f~~~~~~H~v~~~~~-----~~P~g~~~f~~~pg~t~s~TF~~pG~y~y~C~--~H~~~GM~G~I~V~~ 94 (123)
T 3erx_A 22 FVRAEPGDVINFVPTDKSHNVEAIKE-----ILPEGVESFKSKINESYTLTVTEPGLYGVKCT--PHFGMGMVGLVQVGD 94 (123)
T ss_dssp EEEECTTEEEEEEESSTTCCCEECTT-----SSCTTCCCCBCCTTCCEEEEECSCEEEEEECG--GGTTTTCEEEEEESS
T ss_pred EEEECCCCEEEEEECCCCceEEEcCC-----cCCCCccceecCCCCEEEEEeCCCeEEEEEeC--CCCcCCcEEEEEECC
Confidence 5789999999999988 799986422 2222221 22233 4789999999999999 799999999999986
Q ss_pred C
Q 031614 123 S 123 (156)
Q Consensus 123 ~ 123 (156)
.
T Consensus 95 ~ 95 (123)
T 3erx_A 95 A 95 (123)
T ss_dssp S
T ss_pred C
Confidence 3
No 12
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=98.82 E-value=1.2e-08 Score=75.82 Aligned_cols=69 Identities=23% Similarity=0.289 Sum_probs=53.5
Q ss_pred CCeEEeCCEEEEeecC-CCeeEEeCcccCCCCCCCCcc---ccCCc-eEEEeCCcccEEEEcCCCCCcCCCCeEEEEecC
Q 031614 48 NKTFEVGDSVMFNWST-THNVADVSKSEYDDCSKTSSV---VASHP-VQIQLNSTGSRYFICTVDDHCGRGQKLAITVKN 122 (156)
Q Consensus 48 ~~tF~vGD~L~F~y~~-~H~V~~V~~~~y~~C~~~~~~---~~~G~-~~v~L~~~G~~YFiC~v~~hC~~GmKl~I~V~~ 122 (156)
..++++||++.|.+.+ .|+|...+. +.+.... ...|. .++++++||.|+|+|+ .||..||+-.|+|.+
T Consensus 24 ~i~V~~GDtVtf~n~~~~H~v~~~~~-----~~P~g~~~f~s~pGet~s~TF~~pG~y~y~C~--~H~~~GM~G~I~V~~ 96 (127)
T 3tu6_A 24 VIRAQPGDTVTFVAKDKGHNSALMKG-----GAPEGAETWKGKINEEITVTLSKPGVYMYQCA--PHVGMGMIGAIVVGE 96 (127)
T ss_dssp EEEECTTCEEEEECSSSSCCCEECTT-----CSCTTCCCCBCCTTCCCEEECCSCEEEEEECT--TTGGGTCEEEEEESS
T ss_pred EEEECCCCEEEEEECCCCceEEEccC-----cCCCCccceecCCCCEEEEEeCCCeEEEEEeC--CCCcCCcEEEEEECc
Confidence 5789999999999988 799986532 2222221 22333 4899999999999999 699999999999987
Q ss_pred C
Q 031614 123 S 123 (156)
Q Consensus 123 ~ 123 (156)
+
T Consensus 97 ~ 97 (127)
T 3tu6_A 97 P 97 (127)
T ss_dssp C
T ss_pred C
Confidence 4
No 13
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=98.82 E-value=2e-08 Score=74.23 Aligned_cols=73 Identities=21% Similarity=0.330 Sum_probs=54.6
Q ss_pred CCeEEeCCEEEEeecC-----CCeeEEeCcc------------------cCCCCCCCCcc-----ccCCce---EEEeCC
Q 031614 48 NKTFEVGDSVMFNWST-----THNVADVSKS------------------EYDDCSKTSSV-----VASHPV---QIQLNS 96 (156)
Q Consensus 48 ~~tF~vGD~L~F~y~~-----~H~V~~V~~~------------------~y~~C~~~~~~-----~~~G~~---~v~L~~ 96 (156)
..+++.||++.|++.+ .|++...+.. +|..|+..+.. ...|.+ .|+.++
T Consensus 36 ~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~pGet~~v~f~~~~ 115 (139)
T 2aan_A 36 ELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNETVEVTFTAPA 115 (139)
T ss_dssp EEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCTTCEEEEEEECCS
T ss_pred eEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCCCCEEEEEEECCC
Confidence 5789999999988864 4999887532 56666543321 444543 445558
Q ss_pred cccEEEEcCCCCCcCCCCeEEEEec
Q 031614 97 TGSRYFICTVDDHCGRGQKLAITVK 121 (156)
Q Consensus 97 ~G~~YFiC~v~~hC~~GmKl~I~V~ 121 (156)
||.|+|+|.+++||. ||+-.|.|.
T Consensus 116 pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 116 AGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp SEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred CeEEEEEcCCCChHH-cCEEEEEEC
Confidence 999999999999999 999999884
No 14
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=98.79 E-value=1.5e-08 Score=75.13 Aligned_cols=68 Identities=22% Similarity=0.285 Sum_probs=53.5
Q ss_pred CCeEEeCCEEEEeecC-CCeeEEeCcccCCCCCCCCcc---ccCCc-eEEEeCCcccEEEEcCCCCCcCCCCeEEEEecC
Q 031614 48 NKTFEVGDSVMFNWST-THNVADVSKSEYDDCSKTSSV---VASHP-VQIQLNSTGSRYFICTVDDHCGRGQKLAITVKN 122 (156)
Q Consensus 48 ~~tF~vGD~L~F~y~~-~H~V~~V~~~~y~~C~~~~~~---~~~G~-~~v~L~~~G~~YFiC~v~~hC~~GmKl~I~V~~ 122 (156)
..++++||++.|.+.+ .|+|...+. +-+.+.. ...|. .++++++||.|.|+|+ .||..||+-.|+|.+
T Consensus 23 ~i~V~~GDTV~f~n~~~~Hnv~~~~~-----~~p~g~~~~~~~pg~t~s~TF~~~G~y~Y~C~--~H~~~GM~G~I~V~~ 95 (124)
T 3ef4_A 23 FVKVEAGDTVKFVPTDKSHNAESVRE-----VWPEGVAPVKGGFSKEVVFNAEKEGLYVLKCA--PHYGMGMVVLVQVGK 95 (124)
T ss_dssp EEEECTTCEEEEECSSSSCCCEECTT-----TSCTTSCCCBCCTTCCEEEECCSSEEEEEECT--TTGGGTCEEEEEESS
T ss_pred EEEECCCCEEEEEECCCCccEEEeCC-----cCCCCccccccCCCCEEEEEeCCCeEEEEEcC--CCCcCCCEEEEEECC
Confidence 5789999999999988 799986522 2222222 23344 4789999999999997 799999999999987
No 15
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=98.78 E-value=7.6e-09 Score=72.14 Aligned_cols=72 Identities=21% Similarity=0.305 Sum_probs=52.0
Q ss_pred CCeEEeCCEEEEeecC--CCeeEEeCcc---cCCCCCCCCc-c-ccCCce-EEEeCCcccEEEEcCCCCCcCCCCeEEEE
Q 031614 48 NKTFEVGDSVMFNWST--THNVADVSKS---EYDDCSKTSS-V-VASHPV-QIQLNSTGSRYFICTVDDHCGRGQKLAIT 119 (156)
Q Consensus 48 ~~tF~vGD~L~F~y~~--~H~V~~V~~~---~y~~C~~~~~-~-~~~G~~-~v~L~~~G~~YFiC~v~~hC~~GmKl~I~ 119 (156)
..++++||++.|.+.. .|+|...+.. +++.+..+.. . ...|.+ ++++++||.|+|+|+. ||..||+..|.
T Consensus 19 ~i~v~~GdtV~~~n~~~~~H~v~~~~~~~p~g~~~~~~~~~~~~~~~g~~~~~tf~~~G~y~y~C~~--H~~~gM~G~I~ 96 (98)
T 1iuz_A 19 KISVAAGEAIEFVNNAGFPHNIVFDEDAVPAGVDADAISYDDYLNSKGETVVRKLSTPGVYGVYCEP--HAGAGMKMTIT 96 (98)
T ss_dssp EEEECTTCEEEEEECSSCCEEEEECTTSSCTTCCHHHHCEEEEECSTTCEEEEECCSCEEEEEECTT--TGGGTCEEEEE
T ss_pred EEEECCCCEEEEEECCCCCEEEEEeCCCCccccccccccccccccCCCCEEEEEcCCCEEEEEEchh--hccCCCEEEEE
Confidence 5789999999999876 5999865321 2222211111 1 344543 7899999999999995 99999999998
Q ss_pred ec
Q 031614 120 VK 121 (156)
Q Consensus 120 V~ 121 (156)
|.
T Consensus 97 V~ 98 (98)
T 1iuz_A 97 VQ 98 (98)
T ss_dssp EC
T ss_pred EC
Confidence 84
No 16
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.75 E-value=2.4e-08 Score=69.90 Aligned_cols=72 Identities=25% Similarity=0.291 Sum_probs=51.3
Q ss_pred CCeEEeCCEEEEeecC--CCeeEEeCcccCC-----C--CCCCCccccCCc-eEEEe---CCcccEEEEcCCCCCcCCCC
Q 031614 48 NKTFEVGDSVMFNWST--THNVADVSKSEYD-----D--CSKTSSVVASHP-VQIQL---NSTGSRYFICTVDDHCGRGQ 114 (156)
Q Consensus 48 ~~tF~vGD~L~F~y~~--~H~V~~V~~~~y~-----~--C~~~~~~~~~G~-~~v~L---~~~G~~YFiC~v~~hC~~Gm 114 (156)
..++++||++.|.+.. .|++...+....+ . +..+......|. .++++ ++||.|+|.|. .||+.||
T Consensus 21 ~i~v~~Gd~V~~~n~~~~~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G~y~y~C~--~H~~~GM 98 (106)
T 2gim_A 21 KLTIKPGDTVEFLNNKVPPHNVVFDAALNPAKSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCE--PHRGAGM 98 (106)
T ss_dssp EEEECTTCEEEEEECSSSCCCBEECSSSSTTCCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSEEEEEECT--TTGGGTC
T ss_pred EEEECCCCEEEEEECCCCCceEEEeCCCCcccccccchhccccceeeCCCCEEEEEEecCCCCceEEEEeC--ChhhcCc
Confidence 5789999999999775 5999865322110 0 001111234444 47888 89999999999 8999999
Q ss_pred eEEEEec
Q 031614 115 KLAITVK 121 (156)
Q Consensus 115 Kl~I~V~ 121 (156)
+..|+|.
T Consensus 99 ~G~i~V~ 105 (106)
T 2gim_A 99 VGKITVA 105 (106)
T ss_dssp EEEEEEC
T ss_pred EEEEEEc
Confidence 9999986
No 17
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.73 E-value=4e-08 Score=68.20 Aligned_cols=72 Identities=22% Similarity=0.367 Sum_probs=52.2
Q ss_pred CCeEEeCCEEEEeecC--CCeeEEeCcc---cCCCCCC---CCcc-ccCCc-eEEEeCCcccEEEEcCCCCCcCCCCeEE
Q 031614 48 NKTFEVGDSVMFNWST--THNVADVSKS---EYDDCSK---TSSV-VASHP-VQIQLNSTGSRYFICTVDDHCGRGQKLA 117 (156)
Q Consensus 48 ~~tF~vGD~L~F~y~~--~H~V~~V~~~---~y~~C~~---~~~~-~~~G~-~~v~L~~~G~~YFiC~v~~hC~~GmKl~ 117 (156)
..++++||+++|++.. .|++...+.. +.+.+.. .+.. ...|. .++++++||.|.|.|. .||+.||+..
T Consensus 18 ~i~v~~G~tV~~~n~~~~~H~v~~~~~~~p~~~~~~~~~~~~~~~~~~~G~~~~~tf~~~G~y~~~C~--~H~~~gM~G~ 95 (99)
T 1plc_A 18 EFSISPGEKIVFKNNAGFPHNIVFDEDSIPSGVDASKISMSEEDLLNAKGETFEVALSNKGEYSFYCS--PHQGAGMVGK 95 (99)
T ss_dssp EEEECTTCEEEEEECSSCCBCCEECTTSSCTTCCHHHHCCCTTCCBCSTTCEEEEECCSCEEEEEECG--GGTTTTCEEE
T ss_pred EEEECCCCEEEEEECCCCceEEEEeCCCCcccccccccccccCccccCCCCEEEEEECCCceEEEEcC--CCcccCCEEE
Confidence 4789999999998876 5999876432 1121210 1112 34444 4789999999999999 8999999999
Q ss_pred EEec
Q 031614 118 ITVK 121 (156)
Q Consensus 118 I~V~ 121 (156)
|+|.
T Consensus 96 i~V~ 99 (99)
T 1plc_A 96 VTVN 99 (99)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9984
No 18
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.72 E-value=4.3e-08 Score=67.66 Aligned_cols=72 Identities=29% Similarity=0.354 Sum_probs=51.9
Q ss_pred CCeEEeCCEEEEeecC--CCeeEEeCccc---CCCCCCCCccccCC-ceEEEeCCcccEEEEcCCCCCcCCCCeEEEEec
Q 031614 48 NKTFEVGDSVMFNWST--THNVADVSKSE---YDDCSKTSSVVASH-PVQIQLNSTGSRYFICTVDDHCGRGQKLAITVK 121 (156)
Q Consensus 48 ~~tF~vGD~L~F~y~~--~H~V~~V~~~~---y~~C~~~~~~~~~G-~~~v~L~~~G~~YFiC~v~~hC~~GmKl~I~V~ 121 (156)
..++++||+++|.+.. .|++...+... .+.+.........| ..++++++||.|.|.|. +||+.||+..|+|.
T Consensus 20 ~i~v~~G~~V~~~n~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~tf~~~G~y~y~C~--~H~~~gM~G~i~V~ 97 (97)
T 1b3i_A 20 ALSISAGDTVEFVMNKVGPHNVIFDKVPAGESAPALSNTKLAIAPGSFYSVTLGTPGTYSFYCT--PHRGAGMVGTITVE 97 (97)
T ss_dssp EEEECTTCEEEEEECSSCCCCBEEEECCTTSCHHHHCBCCCCCSCSCCEEEECCSCSEEEEECS--STTTTTCEEEEEEC
T ss_pred EEEECCCCEEEEEECCCCCeEEEEeCCCCccccccccccceecCCCCEEEEEeCCCeEEEEEcc--ChhhcCCEEEEEEC
Confidence 4789999999999876 59998763321 00011122223334 35789999999999999 89999999999884
No 19
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.68 E-value=4.9e-08 Score=68.00 Aligned_cols=72 Identities=22% Similarity=0.310 Sum_probs=52.2
Q ss_pred CCeEEeCCEEEEeecC--CCeeEEeCcccCC----CCC----C-CCcc-ccCCc-eEEEeCCcccEEEEcCCCCCcCCCC
Q 031614 48 NKTFEVGDSVMFNWST--THNVADVSKSEYD----DCS----K-TSSV-VASHP-VQIQLNSTGSRYFICTVDDHCGRGQ 114 (156)
Q Consensus 48 ~~tF~vGD~L~F~y~~--~H~V~~V~~~~y~----~C~----~-~~~~-~~~G~-~~v~L~~~G~~YFiC~v~~hC~~Gm 114 (156)
..++++||++.|.... .|++...+....+ .|+ . .+.. ...|. .++++++||.|.|+|+ .||..||
T Consensus 18 ~i~v~~G~tV~~~n~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~tf~~~G~y~y~C~--~H~~~gM 95 (102)
T 1kdj_A 18 SITVSAGEAVEFTLVGETGHNIVFDIPAGAPGTVASELKAASMDENDLLSEDEPSFKAKVSTPGTYTFYCT--PHKSANM 95 (102)
T ss_dssp EEEECTTCCEEEEECSSSCBCCEECCCTTCCHHHHHHHHHTSCCTTCCBBTTBCEEEECCCSCEEEEEECS--TTGGGTC
T ss_pred EEEECCCCEEEEEECCCCCeEEEEeCcccccccccchhhcccccccceecCCCCEEEEEeCCCeEEEEEeC--CCcccCC
Confidence 4789999999999876 5999876433221 111 0 0122 44443 4788899999999999 9999999
Q ss_pred eEEEEec
Q 031614 115 KLAITVK 121 (156)
Q Consensus 115 Kl~I~V~ 121 (156)
+..|+|.
T Consensus 96 ~G~i~V~ 102 (102)
T 1kdj_A 96 KGTLTVK 102 (102)
T ss_dssp EEEEEEC
T ss_pred eEEEEEC
Confidence 9999984
No 20
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.63 E-value=1.1e-07 Score=65.77 Aligned_cols=72 Identities=22% Similarity=0.314 Sum_probs=52.1
Q ss_pred CCeEEeCCEEEEeecC--CCeeEEeCcc---cCCCCCC----CCccccCCc-eEEEeCCcccEEEEcCCCCCcCCCCeEE
Q 031614 48 NKTFEVGDSVMFNWST--THNVADVSKS---EYDDCSK----TSSVVASHP-VQIQLNSTGSRYFICTVDDHCGRGQKLA 117 (156)
Q Consensus 48 ~~tF~vGD~L~F~y~~--~H~V~~V~~~---~y~~C~~----~~~~~~~G~-~~v~L~~~G~~YFiC~v~~hC~~GmKl~ 117 (156)
..++++||+++|+... .|++...+.. +.+.+.. .+.....|. .++++++||.|.|.|+ .||+.||+-.
T Consensus 18 ~i~v~~G~tV~~~n~~~~~H~~~~~~~~~p~g~~~~~~~~~~~~~~~~~G~~~~~~f~~~G~y~~~C~--~H~~~gM~G~ 95 (99)
T 1byp_A 18 DLSIASGEKITFKNNAGFPHNDLFDKKEVPAGVDVTKISMPEEDLLNAPGEEYSVTLTEKGTYKFYCA--PHAGAGMVGK 95 (99)
T ss_dssp EEEECTTEEEEEEECSSCCBCCEECTTSSCTTCCHHHHSCCTTCCBCSTTCEEEEEECSCEEEEEECG--GGTTTTCEEE
T ss_pred EEEECCCCEEEEEECCCCcceEEEeCCCCccccccccccccccceeeCCCCEEEEEeCCCcEEEEEcC--CccccCCEEE
Confidence 4789999999998876 5999876421 1222211 111234454 4789999999999999 8999999999
Q ss_pred EEec
Q 031614 118 ITVK 121 (156)
Q Consensus 118 I~V~ 121 (156)
|+|.
T Consensus 96 i~V~ 99 (99)
T 1byp_A 96 VTVN 99 (99)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9884
No 21
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.61 E-value=3.3e-08 Score=68.27 Aligned_cols=72 Identities=21% Similarity=0.296 Sum_probs=51.6
Q ss_pred CCeEEeCCEEEEeecC--CCeeEEeCcc---cCCCCCCCC-cc-ccCCce-EEEeCCcccEEEEcCCCCCcCCCCeEEEE
Q 031614 48 NKTFEVGDSVMFNWST--THNVADVSKS---EYDDCSKTS-SV-VASHPV-QIQLNSTGSRYFICTVDDHCGRGQKLAIT 119 (156)
Q Consensus 48 ~~tF~vGD~L~F~y~~--~H~V~~V~~~---~y~~C~~~~-~~-~~~G~~-~v~L~~~G~~YFiC~v~~hC~~GmKl~I~ 119 (156)
..++++||+++|+... .|++...+.. +++.+.... .. ...|.+ ++++++||+|.|.|. .||+.||+-.|+
T Consensus 19 ~i~v~~G~~V~~~n~~~~~H~~~~~~~~~p~~~~~~~~~~~~~~~~pG~~~~~tf~~~G~y~y~C~--~H~~~gM~G~i~ 96 (98)
T 2plt_A 19 TLTIKSGETVNFVNNAGFPHNIVFDEDAIPSGVNADAISRDDYLNAPGETYSVKLTAAGEYGYYCE--PHQGAGMVGKII 96 (98)
T ss_dssp EEEECTTCEEEEEECSSCCEEEEECGGGSCTTCCHHHHCEEEEECSTTCEEEEECCSCEEEEEECG--GGGGGTCEEEEE
T ss_pred EEEECCCCEEEEEECCCCceEEEEeCCCCCCccccccccccceecCCCCEEEEEeCCCeEEEEEcC--CccccCCeEEEE
Confidence 4789999999998876 5999865321 122111111 12 444544 789999999999999 799999999998
Q ss_pred ec
Q 031614 120 VK 121 (156)
Q Consensus 120 V~ 121 (156)
|.
T Consensus 97 V~ 98 (98)
T 2plt_A 97 VQ 98 (98)
T ss_dssp EC
T ss_pred EC
Confidence 84
No 22
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.43 E-value=2.2e-07 Score=64.12 Aligned_cols=72 Identities=17% Similarity=0.268 Sum_probs=50.5
Q ss_pred CCeEEeCCEEEEeecC--CCeeEEeCcccC--CCCCCC-Ccc-ccCCc-eEEEeCCcccEEEEcCCCCCcCCCCeEEEEe
Q 031614 48 NKTFEVGDSVMFNWST--THNVADVSKSEY--DDCSKT-SSV-VASHP-VQIQLNSTGSRYFICTVDDHCGRGQKLAITV 120 (156)
Q Consensus 48 ~~tF~vGD~L~F~y~~--~H~V~~V~~~~y--~~C~~~-~~~-~~~G~-~~v~L~~~G~~YFiC~v~~hC~~GmKl~I~V 120 (156)
..++++||++.|.+.. .|++...+...- +..+.. +.. ...|. .++++++||+|.|.|. .||..||+-.|.|
T Consensus 20 ~i~v~~G~~V~~~n~~~~~H~~~~~~~~~pg~~~~~~~~~~~~~~pG~~~~~tf~~~G~y~~~C~--~H~~~gM~G~i~V 97 (98)
T 1pcs_A 20 TVTIKAGEEVKWVNNKLSPHNIVFDADGVPADTAAKLSHKGLLFAAGESFTSTFTEPGTYTYYCE--PHRGAGMVGKVVV 97 (98)
T ss_dssp EEEECTTCEEEEEECSSCCEEEEECCSSSCHHHHHHHCEEEEECSTTCEEEEECCSCEEEEEECG--GGTTTTCEEEEEE
T ss_pred EEEECCCCEEEEEECCCCCcEEEEeCCCCCccccccccccccccCCCCEEEEEcCCCeEEEEEcC--CccccCCeEEEEE
Confidence 4789999999999876 599986532100 000000 011 34444 4788899999999999 7999999999988
Q ss_pred c
Q 031614 121 K 121 (156)
Q Consensus 121 ~ 121 (156)
.
T Consensus 98 ~ 98 (98)
T 1pcs_A 98 E 98 (98)
T ss_dssp C
T ss_pred C
Confidence 4
No 23
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.40 E-value=8.4e-07 Score=65.54 Aligned_cols=77 Identities=21% Similarity=0.203 Sum_probs=52.7
Q ss_pred cCcccCCCccchhcccCCCeEEeCCEEEEeecC--CCeeEEeCcccCCCCCCCCccccCCc-eEEEeCCcccEEEEcCCC
Q 031614 31 LHWIVPTSADYYTNWISNKTFEVGDSVMFNWST--THNVADVSKSEYDDCSKTSSVVASHP-VQIQLNSTGSRYFICTVD 107 (156)
Q Consensus 31 ~gW~~~~~~~~Y~~Wa~~~tF~vGD~L~F~y~~--~H~V~~V~~~~y~~C~~~~~~~~~G~-~~v~L~~~G~~YFiC~v~ 107 (156)
.++.+.|+ ..++++||++.|.... .|++...+...- .=.........|. ..+++++||.|.|.|+.
T Consensus 53 ~~~~F~P~---------~i~V~~GdtV~~~N~d~~~H~v~~~~~~~g-~~~~~s~~l~pG~t~~~tF~~~G~y~y~C~~- 121 (132)
T 3c75_A 53 EKMKYLTP---------EVTIKAGETVYWVNGEVMPHNVAFKKGIVG-EDAFRGEMMTKDQAYAITFNEAGSYDYFCTP- 121 (132)
T ss_dssp ETTEESSS---------EEEECTTCEEEEEECSSSCBCCEECTTTSS-SSCEECCCBCTTEEEEEEECSCEEEEEECSS-
T ss_pred eeeEEeCC---------EEEECCCCEEEEEECCCCceEEEEeCCCCC-cccccccccCCCCEEEEEcCCCEEEEEEeCC-
Confidence 56666665 5789999999999765 499986532210 0001111133444 47888999999999997
Q ss_pred CCcCCCCeEEEEec
Q 031614 108 DHCGRGQKLAITVK 121 (156)
Q Consensus 108 ~hC~~GmKl~I~V~ 121 (156)
|. ||+-.|.|+
T Consensus 122 -H~--gM~G~I~V~ 132 (132)
T 3c75_A 122 -HP--FMRGKVIVE 132 (132)
T ss_dssp -CT--TCEEEEEEC
T ss_pred -Cc--CCEEEEEEC
Confidence 65 999999884
No 24
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.36 E-value=3.4e-07 Score=63.93 Aligned_cols=72 Identities=19% Similarity=0.182 Sum_probs=51.5
Q ss_pred cCcccCCCccchhcccCCCeEEeCCEEEEeecC----CCeeEEeCcccCCCCCCCCcc-ccCCce---EEEeCCcccEEE
Q 031614 31 LHWIVPTSADYYTNWISNKTFEVGDSVMFNWST----THNVADVSKSEYDDCSKTSSV-VASHPV---QIQLNSTGSRYF 102 (156)
Q Consensus 31 ~gW~~~~~~~~Y~~Wa~~~tF~vGD~L~F~y~~----~H~V~~V~~~~y~~C~~~~~~-~~~G~~---~v~L~~~G~~YF 102 (156)
.++.+.|+ ..++++||++.|.+.+ .|++..-+.. ... ...|.. .++.++||.|.|
T Consensus 21 ~~~~F~P~---------~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~--------~~~~~~pg~~~~~~~t~~~~G~Y~y 83 (100)
T 4hci_A 21 NDDYFNPN---------VITIPINESTTLLLKNKGKSEHTFTIKKLG--------IDVVVESGKEKNITVKPKSAGTYEL 83 (100)
T ss_dssp ETTEEESS---------EEEECTTSCEEEEEEECSSSCEEEEEGGGT--------EEEEECTTCEEEEEECCCSCEEEEE
T ss_pred ECCEEeCC---------EEEECCCCEEEEEEEcCCCceEEEEEecCC--------cceeecCCcceeEEEecccCceEEE
Confidence 56677665 5899999999998754 2777542111 011 333432 567789999999
Q ss_pred EcCCCCCcCCCCeEEEEec
Q 031614 103 ICTVDDHCGRGQKLAITVK 121 (156)
Q Consensus 103 iC~v~~hC~~GmKl~I~V~ 121 (156)
.|. .||..||+-.|.|+
T Consensus 84 ~C~--~H~~~gM~G~i~Ve 100 (100)
T 4hci_A 84 ICR--YHLLKGMEGKVIVK 100 (100)
T ss_dssp ECT--TTGGGTCEEEEEEC
T ss_pred ECc--cccCCCCEEEEEEC
Confidence 996 69999999999985
No 25
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=98.19 E-value=6.6e-06 Score=58.18 Aligned_cols=77 Identities=21% Similarity=0.220 Sum_probs=52.6
Q ss_pred cCcccCCCccchhcccCCCeEEeCCEEEEeecC--CCeeEEeCcccCCCCCCCCccccCCc-eEEEeCCcccEEEEcCCC
Q 031614 31 LHWIVPTSADYYTNWISNKTFEVGDSVMFNWST--THNVADVSKSEYDDCSKTSSVVASHP-VQIQLNSTGSRYFICTVD 107 (156)
Q Consensus 31 ~gW~~~~~~~~Y~~Wa~~~tF~vGD~L~F~y~~--~H~V~~V~~~~y~~C~~~~~~~~~G~-~~v~L~~~G~~YFiC~v~ 107 (156)
.++.+.|+ ..++++||++.|.... .|++...+... ..=.........|. .+++++++|.|.|.|+.
T Consensus 27 ~~~~F~P~---------~i~V~~G~tV~~~N~d~~~H~v~~~~~~~-~~~~~~s~~l~~g~~~~~tf~~~G~y~~~C~~- 95 (106)
T 1id2_A 27 EKMKYLTP---------EVTIKAGETVYWVNGEVMPHNVAFKKGIV-GEDAFRGEMMTKDQAYAITFNEAGSYDYFCTP- 95 (106)
T ss_dssp ETTEESSS---------EEEECTTCEEEEEECSSSCBCCEECTTTS-SSSCEECCCBCTTEEEEEEECSCEEEEEECSS-
T ss_pred EecEEeCC---------EEEECCCCEEEEEECCCCcEEEEEeCCCC-CcccccccccCCCCEEEEEeCCCEEEEEEeCC-
Confidence 56677665 5789999999999765 49997653221 00001111233443 47889999999999997
Q ss_pred CCcCCCCeEEEEec
Q 031614 108 DHCGRGQKLAITVK 121 (156)
Q Consensus 108 ~hC~~GmKl~I~V~ 121 (156)
|. ||+-.|.|.
T Consensus 96 -H~--~M~G~I~V~ 106 (106)
T 1id2_A 96 -HP--FMRGKVIVE 106 (106)
T ss_dssp -CT--TCEEEEEEC
T ss_pred -CC--CCEEEEEEC
Confidence 76 999999884
No 26
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=98.11 E-value=1.2e-05 Score=56.61 Aligned_cols=79 Identities=19% Similarity=0.218 Sum_probs=55.4
Q ss_pred hhhhhc---cCcccCCCccchhcccCCCeEEeCCEEEEeecC--CCeeEEeCccc----CCCCCCCCccccCCc-eEEEe
Q 031614 25 AAAEYK---LHWIVPTSADYYTNWISNKTFEVGDSVMFNWST--THNVADVSKSE----YDDCSKTSSVVASHP-VQIQL 94 (156)
Q Consensus 25 ~A~~~~---~gW~~~~~~~~Y~~Wa~~~tF~vGD~L~F~y~~--~H~V~~V~~~~----y~~C~~~~~~~~~G~-~~v~L 94 (156)
.+.++. .+|.+.++ ..++++||++.|.... .|+|...+..+ ++. .....|. ..+++
T Consensus 17 ~a~~~~V~~~~~~F~P~---------~i~v~~Gd~V~~~N~d~~~H~v~~~~~~~g~~~~~~-----~~~~pG~~~~~tf 82 (105)
T 2ov0_A 17 ADGAIVVDIAKMKYETP---------ELHVKVGDTVTWINREAMPHNVHFVAGVLGEAALKG-----PMMKKEQAYSLTF 82 (105)
T ss_dssp CTTCEEEEEETTEESSS---------EEEECTTCEEEEEECSSSCBCCEECTTTSSSSCEEC-----CCBCTTEEEEEEE
T ss_pred CCcCEEEEEeecEEcCC---------EEEECCCCEEEEEECCCCCEEEEEcCCCCCcccccc-----cccCCCCEEEEEe
Confidence 445555 67888775 5789999999998765 59997643211 111 1133343 47888
Q ss_pred CCcccEEEEcCCCCCcCCCCeEEEEec
Q 031614 95 NSTGSRYFICTVDDHCGRGQKLAITVK 121 (156)
Q Consensus 95 ~~~G~~YFiC~v~~hC~~GmKl~I~V~ 121 (156)
+++|.|+|.|.. |- ||+-.|.|.
T Consensus 83 ~~~G~y~y~C~~--H~--gM~G~i~V~ 105 (105)
T 2ov0_A 83 TEAGTYDYHCTP--HP--FMRGKVVVE 105 (105)
T ss_dssp CSCEEEEEECSS--CT--TCEEEEEEC
T ss_pred CCCEEEEEEeCC--CC--CCEEEEEEC
Confidence 999999999997 43 999999884
No 27
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=98.09 E-value=8.2e-06 Score=59.66 Aligned_cols=67 Identities=18% Similarity=0.197 Sum_probs=50.0
Q ss_pred CCeEEeCCEEEEeecC-CCeeEEeCcccCCCCCCCCcc---ccCCc-eEEEeCCcccEEEEcCCCCCcCCCCeEEEEecC
Q 031614 48 NKTFEVGDSVMFNWST-THNVADVSKSEYDDCSKTSSV---VASHP-VQIQLNSTGSRYFICTVDDHCGRGQKLAITVKN 122 (156)
Q Consensus 48 ~~tF~vGD~L~F~y~~-~H~V~~V~~~~y~~C~~~~~~---~~~G~-~~v~L~~~G~~YFiC~v~~hC~~GmKl~I~V~~ 122 (156)
..++++||++.|.+.. .|+|...+ .+-+.... ...|. .+++++++|.|.|+|+. |.. |+-.|+|.+
T Consensus 22 ~i~V~~GdtV~f~n~d~~H~v~~~~-----~~~p~~~~~~~~~~g~t~~~tF~~~G~y~y~C~~--H~~--M~G~I~V~~ 92 (122)
T 2ux6_A 22 SLKVAPGDTVTFIPTDKGHNVETIK-----GMIPDGAEAFKSKINENYKVTFTAPGVYGVKCTP--HPF--MVGVVQVGD 92 (122)
T ss_dssp EEEECTTEEEEEEESSSSCCCEECT-----TCSCTTCCCCBCCTTCCEEEEECSCEEEEEEETT--EEE--EEEEEEESS
T ss_pred EEEECCCCEEEEEECCCCcEEEEcc-----cccCCCcceeecCCCCEEEEEeCCCEEEEEEeCC--Ccc--CEEEEEEeC
Confidence 4788999999999987 79998653 12222221 22233 47899999999999987 877 999999986
Q ss_pred C
Q 031614 123 S 123 (156)
Q Consensus 123 ~ 123 (156)
.
T Consensus 93 ~ 93 (122)
T 2ux6_A 93 A 93 (122)
T ss_dssp S
T ss_pred C
Confidence 4
No 28
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=97.95 E-value=4.7e-05 Score=56.31 Aligned_cols=73 Identities=7% Similarity=0.196 Sum_probs=48.8
Q ss_pred CCeEEeC-CEEEEeecC--C-------CeeEEeCcc----------------cCCCCCCCCc-----cccCCce-EEEeC
Q 031614 48 NKTFEVG-DSVMFNWST--T-------HNVADVSKS----------------EYDDCSKTSS-----VVASHPV-QIQLN 95 (156)
Q Consensus 48 ~~tF~vG-D~L~F~y~~--~-------H~V~~V~~~----------------~y~~C~~~~~-----~~~~G~~-~v~L~ 95 (156)
..+++.| |++.|.+.+ . |+++..+.. +|..=+-.+- ....|.+ +++++
T Consensus 19 ~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet~svtf~ 98 (129)
T 1cuo_A 19 SISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKTSVKFK 98 (129)
T ss_dssp EEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEEEEEEE
T ss_pred eEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEECCCCEEEEEEe
Confidence 4788999 977777643 2 999887543 2211111111 1344443 44443
Q ss_pred -----CcccEEEEcCCCCCcCCCCeEEEEec
Q 031614 96 -----STGSRYFICTVDDHCGRGQKLAITVK 121 (156)
Q Consensus 96 -----~~G~~YFiC~v~~hC~~GmKl~I~V~ 121 (156)
+||.|+|+|+.++|=. |||-.|+|.
T Consensus 99 ~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~ 128 (129)
T 1cuo_A 99 VSALSKDEAYTYFCSYPGHFS-MMRGTLKLE 128 (129)
T ss_dssp GGGCCTTSCEEEECCSTTCTT-TSEEEEEEE
T ss_pred ccccCCCceEEEEeCCCCchH-cCEEEEEEe
Confidence 8999999999999999 899999986
No 29
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=97.93 E-value=1.9e-05 Score=54.53 Aligned_cols=70 Identities=24% Similarity=0.320 Sum_probs=49.0
Q ss_pred CCeEEeCCEEEEeecC--CCeeEEeCcccCCCCC---------CCCccccCCc-eEEEe---CCcccEEEEcCCCCCcCC
Q 031614 48 NKTFEVGDSVMFNWST--THNVADVSKSEYDDCS---------KTSSVVASHP-VQIQL---NSTGSRYFICTVDDHCGR 112 (156)
Q Consensus 48 ~~tF~vGD~L~F~y~~--~H~V~~V~~~~y~~C~---------~~~~~~~~G~-~~v~L---~~~G~~YFiC~v~~hC~~ 112 (156)
..+++.||+++|.... .|++..-... ..+. .+......|. .++++ +++|+++|.|. .|+..
T Consensus 20 ~i~v~~Gd~V~~~N~~~~~H~v~~~~~~--~~~~~g~~~~~~~~~~~~i~pG~~~~~~f~~~~~~G~y~y~C~--~H~~~ 95 (105)
T 3cvb_A 20 NVTVHPGDTVKWVNNKLPPHNILFDDKQ--VPGASKELADKLSHSQLMFSPGESYEITFSSDFPAGTYTYYCA--PHRGA 95 (105)
T ss_dssp EEEECTTEEEEEEECSSCCEEEEECTTS--SGGGCHHHHHHHCEEEEECSTTCEEEEEECTTSCSEEEEEECT--TTGGG
T ss_pred EEEEcCCCEEEEEECCCCCCeEEEeCCC--CCcccccccccccccccccCCCCeEEEEEecCCCCeeEEEEeC--Cchhc
Confidence 4788999999998765 5998764221 1110 0001133444 36777 79999999999 79999
Q ss_pred CCeEEEEec
Q 031614 113 GQKLAITVK 121 (156)
Q Consensus 113 GmKl~I~V~ 121 (156)
||+-.|.|.
T Consensus 96 GM~G~i~V~ 104 (105)
T 3cvb_A 96 GMVGKITVE 104 (105)
T ss_dssp TCEEEEEEC
T ss_pred CCEEEEEEc
Confidence 999999985
No 30
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=97.89 E-value=3e-05 Score=60.03 Aligned_cols=73 Identities=15% Similarity=0.236 Sum_probs=48.5
Q ss_pred CCeE-EeCCEEEEeecC---C------CeeEEeCccc---------------CCCCCCCCcc-----ccCCce-EEEeC-
Q 031614 48 NKTF-EVGDSVMFNWST---T------HNVADVSKSE---------------YDDCSKTSSV-----VASHPV-QIQLN- 95 (156)
Q Consensus 48 ~~tF-~vGD~L~F~y~~---~------H~V~~V~~~~---------------y~~C~~~~~~-----~~~G~~-~v~L~- 95 (156)
..++ +.||++.|.+.+ . |+++..+..+ |-.=+-.+.+ ...|.+ +++++
T Consensus 59 ~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pGet~svtf~~ 138 (167)
T 3ay2_A 59 DIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEESSLTLDP 138 (167)
T ss_dssp EEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTTCEEEEEECG
T ss_pred eEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccccccccchhccceeeCCCCEEEEEEec
Confidence 4667 779977666643 2 9998775432 2111111111 344543 56665
Q ss_pred ---CcccEEEEcCCCCCcCCCCeEEEEec
Q 031614 96 ---STGSRYFICTVDDHCGRGQKLAITVK 121 (156)
Q Consensus 96 ---~~G~~YFiC~v~~hC~~GmKl~I~V~ 121 (156)
++|.|+|+|+.++|=+ |||-.|+|.
T Consensus 139 ~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~ 166 (167)
T 3ay2_A 139 AKLADGDYKFACTFPGHGA-LMNGKVTLV 166 (167)
T ss_dssp GGGTTSCEEEECCSTTGGG-TSEEEEEEE
T ss_pred CCCCCcEEEEEcCCCCchh-cCEEEEEEe
Confidence 7999999999999998 999999986
No 31
>3czu_B Ephrin-A1; ATP-binding, kinase, nucleotide-binding, receptor, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG MAN; 2.65A {Homo sapiens} PDB: 3mbw_B*
Probab=97.65 E-value=4.7e-05 Score=59.84 Aligned_cols=101 Identities=22% Similarity=0.318 Sum_probs=58.6
Q ss_pred HHhhhhhhhhhccCcccCCCccchhcccCCCeEEeCCEEEEeecC------------CCeeEEeCcccCCCCCCCC-cc-
Q 031614 19 FLAASAAAAEYKLHWIVPTSADYYTNWISNKTFEVGDSVMFNWST------------THNVADVSKSEYDDCSKTS-SV- 84 (156)
Q Consensus 19 ~l~~~a~A~~~~~gW~~~~~~~~Y~~Wa~~~tF~vGD~L~F~y~~------------~H~V~~V~~~~y~~C~~~~-~~- 84 (156)
+.+..++|..+..-|+.. |+.+... --...+++||.|-+-=+. ...++.|++++|++|+... +.
T Consensus 22 ~~~~~~sa~rh~VyWNSs-Np~F~~~-~y~i~V~i~D~LDIiCP~y~~~~~~~~~~E~y~LY~Vs~e~y~sC~~~~~~~~ 99 (182)
T 3czu_B 22 FQGAMDAADRHTVFWNSS-NPKFRNE-DYTIHVQLNDYVDIICPHYEDHSVADAAMEQYILYLVEHEEYQLCQPQSKDQV 99 (182)
T ss_dssp -------CCEEEEECSTT-CGGGTTS-CCEEEECTTCEEEEECCCCC--CCCGGGSCCEEEEEECHHHHHHTCCCCGGGE
T ss_pred HhhhhhhccccceEEcCC-CccccCC-CceEEeccCCEEEEECCCCCCCCCCCCCceEEEEEEECHHHhhhccCCCCCcE
Confidence 334445566666779875 3332211 123678899999875321 1567899999999998764 22
Q ss_pred -c-------cCCceEEEeC-------------Ccc-cEEEEcCC----CCCcCCCCeEEEEecCCC
Q 031614 85 -V-------ASHPVQIQLN-------------STG-SRYFICTV----DDHCGRGQKLAITVKNSG 124 (156)
Q Consensus 85 -~-------~~G~~~v~L~-------------~~G-~~YFiC~v----~~hC~~GmKl~I~V~~~~ 124 (156)
+ ..|..++++. ++| .||||++- +|.| ||+.|.|....
T Consensus 100 ~~~C~~P~~~~~p~kftikFQ~FSP~p~GlEF~pG~dYY~ISts~~~~gg~C---mrL~v~V~~k~ 162 (182)
T 3czu_B 100 RWQCNRPSAKHGPEKLSEKFQRFTPFTLGKEFKEGHSYYYISKPIHQHEDRC---LRLKVTVSGKI 162 (182)
T ss_dssp EEEECCTTCTTSCCEEEEECCSCCSCTTSCCCCTTCEEEEEEEESSSCCCSC---CEEEEEECC--
T ss_pred EEEeCCCCCCCCCcEEEEEEEEcCCCCCCeeEeCCCeEEEEEccCCCCCCcc---eEEEEEEecCC
Confidence 1 2234443322 467 77888763 3455 99999997654
No 32
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=97.64 E-value=0.00021 Score=52.73 Aligned_cols=72 Identities=19% Similarity=0.296 Sum_probs=46.1
Q ss_pred CeE-EeCCEEEEeecC-C--------CeeEEeCcc----------------cCCCCCCCCc-----cccCCce-EEEeC-
Q 031614 49 KTF-EVGDSVMFNWST-T--------HNVADVSKS----------------EYDDCSKTSS-----VVASHPV-QIQLN- 95 (156)
Q Consensus 49 ~tF-~vGD~L~F~y~~-~--------H~V~~V~~~----------------~y~~C~~~~~-----~~~~G~~-~v~L~- 95 (156)
.++ +.||++.|.+.+ . |+++..+.. +|..=+-.+- ....|.+ +++++
T Consensus 19 i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGes~~vtf~~ 98 (128)
T 2iaa_C 19 IVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGGGETDSVTFDV 98 (128)
T ss_dssp EEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEEEEEES
T ss_pred EEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccchhhccceeeCCCCEEEEEEec
Confidence 445 559977777754 2 999876432 2221111111 1344543 45554
Q ss_pred ---Cccc-EEEEcCCCCCcCCCCeEEEEec
Q 031614 96 ---STGS-RYFICTVDDHCGRGQKLAITVK 121 (156)
Q Consensus 96 ---~~G~-~YFiC~v~~hC~~GmKl~I~V~ 121 (156)
++|. |.|+|++++|=. |||-.|+|.
T Consensus 99 ~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 99 SKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp SCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred cccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 6884 999999999999 999999986
No 33
>1iko_P Ephrin-B2; greek KEY, glycosylation, signaling protein; HET: NAG MAN; 1.92A {Mus musculus} SCOP: b.6.1.5
Probab=97.53 E-value=5.2e-05 Score=59.43 Aligned_cols=75 Identities=19% Similarity=0.318 Sum_probs=52.4
Q ss_pred eEEeCCEEEEeecC----------CCeeEEeCcccCCCCCCCC-c--c----ccCCceEEEeC-------------Ccc-
Q 031614 50 TFEVGDSVMFNWST----------THNVADVSKSEYDDCSKTS-S--V----VASHPVQIQLN-------------STG- 98 (156)
Q Consensus 50 tF~vGD~L~F~y~~----------~H~V~~V~~~~y~~C~~~~-~--~----~~~G~~~v~L~-------------~~G- 98 (156)
..++||.|-+-=+. .+.+++|++++|+.|+... + + -..+...+++. ++|
T Consensus 25 ~v~igD~LdIiCP~~~~~~~~~~E~~~LY~Vs~~~y~~C~~~~~~~~l~~C~~P~~~~kftikFq~fsP~p~GlEF~pg~ 104 (178)
T 1iko_P 25 YPQIGDKLDIICPKVDSKTVGQYEYYKVYMVDKDQADRCTIKKENTPLLNCARPDQDVKFTIKFQEFSPNLWGLEFQKNK 104 (178)
T ss_dssp CCCTTCEEEEECCCCCSSSCSCCCBEEEEEECHHHHHHTBCCTTCCCSEEECCTTSCCEEEEECCSSCSSTTCCCCCTTE
T ss_pred EecCCCEEEEECCCCCCCCCCCceEEEEEEECHHHhhhcccCCCCcEEEEecCCCCCEEEEEEEEecCCCCCcccccCCC
Confidence 34569999886322 1788999999999998763 2 1 12333444442 367
Q ss_pred cEEEEcCCC-----------CCcCC-CCeEEEEecCCC
Q 031614 99 SRYFICTVD-----------DHCGR-GQKLAITVKNSG 124 (156)
Q Consensus 99 ~~YFiC~v~-----------~hC~~-GmKl~I~V~~~~ 124 (156)
.|||||+-. |+|.. +|||.|.|...+
T Consensus 105 ~YY~IstS~G~~~gl~~~~gG~C~t~~Mkl~ikV~~~~ 142 (178)
T 1iko_P 105 DYYIISTSNGSLEGLDNQEGGVCQTRAMKILMKVGQDA 142 (178)
T ss_dssp EEEEECCCCBSGGGTTCCBSHHHHHSCCEEEEEETCC-
T ss_pred ceEEEecCCcccccccccCCCccccceeEEEEEeecCC
Confidence 889999864 68966 899999998654
No 34
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=97.53 E-value=0.00043 Score=51.07 Aligned_cols=72 Identities=13% Similarity=0.266 Sum_probs=45.3
Q ss_pred CeE-EeCCEEEEeecC---C------CeeEEeCcc----------------cCCCCCCCCc-----cccCCce-EEEeC-
Q 031614 49 KTF-EVGDSVMFNWST---T------HNVADVSKS----------------EYDDCSKTSS-----VVASHPV-QIQLN- 95 (156)
Q Consensus 49 ~tF-~vGD~L~F~y~~---~------H~V~~V~~~----------------~y~~C~~~~~-----~~~~G~~-~v~L~- 95 (156)
.++ +.||++.|.+.+ . |+++..+.. +|..=+-.+- ....|.+ +++++
T Consensus 20 i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pGet~svtf~~ 99 (129)
T 2ccw_A 20 IVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESDSVTFDV 99 (129)
T ss_dssp EEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEEEEEEG
T ss_pred EEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccccccccccceeeeeEECCCCEEEEEEec
Confidence 344 559977777754 1 999877543 2221111111 1344443 45544
Q ss_pred ---Cccc-EEEEcCCCCCcCCCCeEEEEec
Q 031614 96 ---STGS-RYFICTVDDHCGRGQKLAITVK 121 (156)
Q Consensus 96 ---~~G~-~YFiC~v~~hC~~GmKl~I~V~ 121 (156)
++|. |.|+|+.++|=+ |||-.|+|.
T Consensus 100 ~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 100 SKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp GGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred cccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 5665 999999999998 999999986
No 35
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=97.52 E-value=0.00027 Score=52.10 Aligned_cols=73 Identities=14% Similarity=0.279 Sum_probs=46.5
Q ss_pred CCeE-EeCCEEEEeecC---C------CeeEEeCccc----------------CCCCCCCCcc-----ccCCce-EEEeC
Q 031614 48 NKTF-EVGDSVMFNWST---T------HNVADVSKSE----------------YDDCSKTSSV-----VASHPV-QIQLN 95 (156)
Q Consensus 48 ~~tF-~vGD~L~F~y~~---~------H~V~~V~~~~----------------y~~C~~~~~~-----~~~G~~-~v~L~ 95 (156)
..++ +.||++.|.+.+ . |+++..+..+ |..=+-.+-+ ...|.+ +++++
T Consensus 19 ~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet~svtf~ 98 (128)
T 1nwp_A 19 DIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKDSVTFD 98 (128)
T ss_dssp EEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEEEEEEE
T ss_pred EEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCEEEEEEe
Confidence 4567 779987777754 2 9998764322 2110111111 344443 45554
Q ss_pred ----Cccc-EEEEcCCCCCcCCCCeEEEEec
Q 031614 96 ----STGS-RYFICTVDDHCGRGQKLAITVK 121 (156)
Q Consensus 96 ----~~G~-~YFiC~v~~hC~~GmKl~I~V~ 121 (156)
++|. |.|+|++++|=. |||-.|+|.
T Consensus 99 ~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 128 (128)
T 1nwp_A 99 VSKLAAGEKYGFFCSFPGHIS-MMKGTVTLK 128 (128)
T ss_dssp GGGSCTTSCEEEECCSTTCGG-GSEEEEEEC
T ss_pred ccccCCCceEEEEECCCChhH-CCEEEEEEC
Confidence 5776 999999999999 999999884
No 36
>2x11_B Ephrin-A5; receptor-signaling protein complex, developmental protein, signaling platform, kinase, transferase, neurogenesis, receptor, cataract; 4.83A {Homo sapiens}
Probab=97.30 E-value=0.00021 Score=55.94 Aligned_cols=96 Identities=18% Similarity=0.304 Sum_probs=59.3
Q ss_pred hhhhhhccCcccCCCccchhcccCCCeEEeCCEEEEe---ecC--------CCeeEEeCcccCCCCCCCCcc---c----
Q 031614 24 AAAAEYKLHWIVPTSADYYTNWISNKTFEVGDSVMFN---WST--------THNVADVSKSEYDDCSKTSSV---V---- 85 (156)
Q Consensus 24 a~A~~~~~gW~~~~~~~~Y~~Wa~~~tF~vGD~L~F~---y~~--------~H~V~~V~~~~y~~C~~~~~~---~---- 85 (156)
+.|..+..-|+... +.+... .-...+++||.|-+- |.. ...++.|++++|++|+..+.. +
T Consensus 29 ~~~~r~~VyWNSsN-p~F~~~-~~~i~V~i~D~LDIiCP~y~~~~~~~~~E~y~LY~Vs~e~y~~C~~~~~~~~~~~C~~ 106 (177)
T 2x11_B 29 AVADRYAVYWNSSN-PRFQRG-DYHIDVCINDYLDVFCPHYEDSVPEDKTERYVLYMVNFDGYSACDHTSKGFKRWECNR 106 (177)
T ss_dssp -CCSEEEEECSTTC-HHHHTS-CCEEEECTTCEEEEECCCCCSSSCSSSCCCEEEEEECHHHHHHTCCTTTEEEEEEECC
T ss_pred ccCccCceEcCCCC-cCccCC-CceEEecCCCEEEEECCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCcEEEEeCC
Confidence 44555557798753 222111 113678899999875 321 256789999999999875532 1
Q ss_pred ---cCCceEEEeC-------------Ccc-cEEEEcCCC-----CCcCCCCeEEEEecCCC
Q 031614 86 ---ASHPVQIQLN-------------STG-SRYFICTVD-----DHCGRGQKLAITVKNSG 124 (156)
Q Consensus 86 ---~~G~~~v~L~-------------~~G-~~YFiC~v~-----~hC~~GmKl~I~V~~~~ 124 (156)
..|+.++++. +|| .||||++-. +-| ||++|.|.+.+
T Consensus 107 P~~p~~~~kftikFQ~FSP~p~G~EF~pG~~YYyISTS~~~~~g~~C---lrLkV~V~p~~ 164 (177)
T 2x11_B 107 PHSPNGPLKFSEKFQLFTPFSLGFEFRPGREYFYISSAIPDNGRRSC---LKLKVFVRPTN 164 (177)
T ss_dssp TTCSSSSCEEEEECCSSCSSTTCCCCCTTEEEEEEEEESSCCCSSSC---CEEEEEECCTT
T ss_pred CCCCCCCeEEEEEEEEcCCCCCCccccCCCeEEEEecCCCCCCCCcc---eEEEEEEEcCC
Confidence 1244444332 467 678886532 235 99999998764
No 37
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=97.25 E-value=0.0005 Score=48.33 Aligned_cols=65 Identities=14% Similarity=0.145 Sum_probs=43.9
Q ss_pred CCeEEeCCEEEEeecC----CCeeEEeCcccCCCCCCCCccccCCce-EE--EeCCcccEEEEcCCCCCcCC-CCeEEEE
Q 031614 48 NKTFEVGDSVMFNWST----THNVADVSKSEYDDCSKTSSVVASHPV-QI--QLNSTGSRYFICTVDDHCGR-GQKLAIT 119 (156)
Q Consensus 48 ~~tF~vGD~L~F~y~~----~H~V~~V~~~~y~~C~~~~~~~~~G~~-~v--~L~~~G~~YFiC~v~~hC~~-GmKl~I~ 119 (156)
..+++.||++.|.+.+ .|++..-+.. . +.....|.. .+ +.++||.|+|.|.. ||.. +|+..|.
T Consensus 39 ~i~v~~G~~V~~~~~n~d~~~H~~~i~~~~------~-~~~i~pG~~~~~~f~~~~~G~y~~~C~~--~~~~~~M~g~i~ 109 (112)
T 1iby_A 39 TLVVKKGDAVKVVVENKSPISEGFSIDAFG------V-QEVIKAGETKTISFTADKAGAFTIWCQL--HPKNIHLPGTLN 109 (112)
T ss_dssp EEEEETTCEEEEEEEECSSSCEEEEEGGGT------E-EEEECTTCEEEEEEECCSCEEEEEBCSS--SCTTTBCCEEEE
T ss_pred EEEEeCCCEEEEEEEECCCCeEEEEEcCCC------c-eeEeCCCCEEEEEEECCCCEEEEEECCC--CCchHHCEEEEE
Confidence 4789999999998764 3887532211 0 011444443 44 44899999999987 6743 3999998
Q ss_pred ec
Q 031614 120 VK 121 (156)
Q Consensus 120 V~ 121 (156)
|.
T Consensus 110 V~ 111 (112)
T 1iby_A 110 VV 111 (112)
T ss_dssp EE
T ss_pred Ee
Confidence 86
No 38
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=97.22 E-value=0.0011 Score=49.07 Aligned_cols=65 Identities=20% Similarity=0.282 Sum_probs=46.5
Q ss_pred CCeEEeCCEEEEeecC---CCeeEEeCcccCCCCCCCCcc-ccCC---ceEEEeCCcccEEEEcCC---CCCcCCCCeEE
Q 031614 48 NKTFEVGDSVMFNWST---THNVADVSKSEYDDCSKTSSV-VASH---PVQIQLNSTGSRYFICTV---DDHCGRGQKLA 117 (156)
Q Consensus 48 ~~tF~vGD~L~F~y~~---~H~V~~V~~~~y~~C~~~~~~-~~~G---~~~v~L~~~G~~YFiC~v---~~hC~~GmKl~ 117 (156)
..++.+||.+.|...+ .|+...- +.+. .. ...| ...++++++|.|+|.|+. .+| .+|+..
T Consensus 61 ~l~Vp~G~~V~~~vts~DV~Hsf~ip-~~~~-------k~d~~PG~~~~~~~~~~~~G~y~~~C~e~CG~~H--~~M~g~ 130 (135)
T 2cua_A 61 PIEVPQGAEIVFKITSPDVIHGFHVE-GTNI-------NVEVLPGEVSTVRYTFKRPGEYRIICNQYCGLGH--QNMFGT 130 (135)
T ss_dssp SEEEETTSEEEEEEEBSSSCEEEEET-TSSC-------EEEECBTBCEEEEEECCSCEEEEEECCSCCSTTS--TTCEEE
T ss_pred EEEEcCCCEEEEEEEeCCccceEEec-CCCc-------eeEeCCCCcEEEEEEcCCCEEEEEECcccCCCCc--CCCEEE
Confidence 5789999999999865 3887632 1111 11 3334 247899999999999986 344 689999
Q ss_pred EEecC
Q 031614 118 ITVKN 122 (156)
Q Consensus 118 I~V~~ 122 (156)
|.|.+
T Consensus 131 v~V~~ 135 (135)
T 2cua_A 131 IVVKE 135 (135)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99863
No 39
>3d12_B Ephrin-B3; beta propeller, protein-receptor complex, envelope protein, glycoprotein, hemagglutinin, hydrolase, membrane, signal-AN transmembrane; HET: NAG BMA MAN BGC LXZ NGA GL0 GLC LXB NGZ GXL; 3.00A {Mus musculus}
Probab=96.66 E-value=0.0038 Score=47.09 Aligned_cols=73 Identities=16% Similarity=0.244 Sum_probs=49.2
Q ss_pred CeEEeCCEEEEeecC-------------CCeeEEeCcccCCCCCCCC-cc--c----cCCceEEEeC-------------
Q 031614 49 KTFEVGDSVMFNWST-------------THNVADVSKSEYDDCSKTS-SV--V----ASHPVQIQLN------------- 95 (156)
Q Consensus 49 ~tF~vGD~L~F~y~~-------------~H~V~~V~~~~y~~C~~~~-~~--~----~~G~~~v~L~------------- 95 (156)
..+++||.|-+-=+. ...++.|++++|++|+... +. + ..++.++++.
T Consensus 22 i~V~i~D~ldIiCP~~~~~~~~~~~~~E~~~lY~Vs~~~y~~C~~~~~~~~~~~C~~P~~~~kft~kFq~fsP~p~G~EF 101 (141)
T 3d12_B 22 LYPQIGDRLDLLCPRARPPGPHSSPSYEFYKLYLVEGAQGRRCEAPPAPNLLLTCDRPDLDLRFTIKFQEYSPNLWGHEF 101 (141)
T ss_dssp ECCCTTCEEEEEECCCSSCCTTCCSSCCCCEEEEECSHHHHTTBCCSSCEEEEECCCSSSCEEEEEESSSCCSCCSCCCC
T ss_pred EEecCCCEEEEECCCCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCeEEEEeCCCCCCeEEEEEEEEcCCCCCceee
Confidence 467789999875322 1568999999999998863 32 1 2344333322
Q ss_pred Ccc-cEEEEcCCC-----------CCcCC-CCeEEEEec
Q 031614 96 STG-SRYFICTVD-----------DHCGR-GQKLAITVK 121 (156)
Q Consensus 96 ~~G-~~YFiC~v~-----------~hC~~-GmKl~I~V~ 121 (156)
+|| .||||++-. |-|.. .||+.|.|.
T Consensus 102 ~pG~~YY~ISts~G~~~gl~~~~gG~C~t~~Mkl~i~V~ 140 (141)
T 3d12_B 102 RSHHDYYIIATSDGTREGLESLQGGVCLTRGMKVLLRVG 140 (141)
T ss_dssp CTTCEEEEEECSCSSTTTTTCCBCSHHHHTCCEEEEECC
T ss_pred eCCCeEEEEecCCCCcccccccCCCccccceEEEEEEec
Confidence 466 778887653 46865 899999985
No 40
>2wo3_B Ephrin-A2; transferase-signaling protein complex, EFN, EPHA4, KINA ephrin, complex, membrane, cell surface receptor, tyrosine- kinase, glycoprotein; HET: NAG; 2.35A {Homo sapiens}
Probab=96.23 E-value=0.0091 Score=45.78 Aligned_cols=76 Identities=12% Similarity=0.179 Sum_probs=47.7
Q ss_pred CeEEeCCEEEEeecC------------CCeeEEeCcccCCCCCCCCcc---c-------cCCceEEEeC-----------
Q 031614 49 KTFEVGDSVMFNWST------------THNVADVSKSEYDDCSKTSSV---V-------ASHPVQIQLN----------- 95 (156)
Q Consensus 49 ~tF~vGD~L~F~y~~------------~H~V~~V~~~~y~~C~~~~~~---~-------~~G~~~v~L~----------- 95 (156)
..+++||.|-+-=+. ...++.|++++|++|+..... + ..|..++++.
T Consensus 32 i~V~i~D~LDIiCP~y~~~~~~~~~~E~y~LY~Vs~~~y~~C~~~~~~~~~~~C~~P~~p~~~~kftikFQ~fSP~p~G~ 111 (157)
T 2wo3_B 32 VEVSINDYLDIYCPHYGAPLPPAERMEHYVLYMVNGEGHASCDHRQRGFKRWECNRPAAPGGPLKFSEKFQLFTPFSLGF 111 (157)
T ss_dssp EEECTTCEEEEECCCCCSSCCCGGGSCCEEEEEECHHHHHHTCCTTSEEEEEEECCTTCTTSSCEEEEECCSSCSSTTSC
T ss_pred EEeccCCEEEEECCCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCCEEEEeCCCCCCCCCeEEEEEEEECCCCCCCe
Confidence 568899999886332 134789999999999886532 1 1234333222
Q ss_pred --Ccc-cEEEEcCCCCCcCCC--CeEEEEecCCC
Q 031614 96 --STG-SRYFICTVDDHCGRG--QKLAITVKNSG 124 (156)
Q Consensus 96 --~~G-~~YFiC~v~~hC~~G--mKl~I~V~~~~ 124 (156)
+|| .||||++-.++=..| |||.|.|....
T Consensus 112 EF~pG~~YY~ISTS~g~~~gg~C~rlkV~V~~~~ 145 (157)
T 2wo3_B 112 EFRPGHEYYYISATPPNAVDRPCLRLKVYVRPTQ 145 (157)
T ss_dssp CCCTTCEEEEEEECTTCSCCTTCCEEEEEECCCC
T ss_pred eeeCCCeEEEEEecCCCCCCCcceeEEEEEEcCC
Confidence 367 788888643321222 68888887653
No 41
>2vsm_B Ephrin-B2; developmental protein, henipavirus, neurogenesis, glycoprotein, paramyxovirus, envelope protein, cell surface receptor, hendra, virion; HET: NAG; 1.80A {Homo sapiens} PDB: 2wo2_B* 2i85_A 3gxu_B 2vsk_B 2hle_B 1kgy_E
Probab=96.22 E-value=0.0045 Score=46.57 Aligned_cols=73 Identities=18% Similarity=0.316 Sum_probs=49.2
Q ss_pred eEEeCCEEEEeecC----------CCeeEEeCcccCCCCCCCC-cc------ccCCceEEEeC-------------Ccc-
Q 031614 50 TFEVGDSVMFNWST----------THNVADVSKSEYDDCSKTS-SV------VASHPVQIQLN-------------STG- 98 (156)
Q Consensus 50 tF~vGD~L~F~y~~----------~H~V~~V~~~~y~~C~~~~-~~------~~~G~~~v~L~-------------~~G- 98 (156)
..++||.|-+-=+. ...++.|++++|++|+... +. -..+...+++. ++|
T Consensus 24 ~v~i~D~ldIiCP~~~~~~~~~~E~~~lY~Vs~~~y~~C~~~~~~~~~~~C~~P~~~~kft~kFq~fsP~~~G~eF~~g~ 103 (140)
T 2vsm_B 24 YPQIGDKLDIICPKVDSKTVGQYEYYKVYMVDKDQADRCTIKKENTPLLNCAKPDQDIKFTIKFQEFSPNLWGLEFQKNK 103 (140)
T ss_dssp CCCTTCEEEEEECCCC---CCCCCBEEEEEECHHHHHHTBCCTTCCCSEEECCTTSCEEEEEESSSCCSCSSCCCCCTTE
T ss_pred EecCCCEEEEECCCCCCCCCCCceEEEEEEECHHHhhhcccCCCCcEEEEecCCCCCEEEEEEEEecCCCCCcccccCCC
Confidence 34579999886332 1578889999999998763 22 22344444333 467
Q ss_pred cEEEEcCCC-----------CCcCC-CCeEEEEecC
Q 031614 99 SRYFICTVD-----------DHCGR-GQKLAITVKN 122 (156)
Q Consensus 99 ~~YFiC~v~-----------~hC~~-GmKl~I~V~~ 122 (156)
.||||++-. |-|.. .||+.|.|..
T Consensus 104 ~YY~Ists~g~~~gl~~~~gG~C~t~~mkl~i~V~~ 139 (140)
T 2vsm_B 104 DYYIISTSNGSLEGLDNQEGGVCQTRAMKILMKVGH 139 (140)
T ss_dssp EEEEECCCCBSGGGTTCCBSHHHHHSCCEEEEEETC
T ss_pred ceEEEecCCCCccccccccCCccccceEEEEEEecC
Confidence 677887743 47865 7999999964
No 42
>1shx_A Ephrin-A5; ephrin signaling, hormone-growth factor complex; HET: NAG; 2.10A {Mus musculus} SCOP: b.6.1.5 PDB: 1shw_A* 3mx0_B*
Probab=96.04 E-value=0.0064 Score=45.70 Aligned_cols=72 Identities=18% Similarity=0.295 Sum_probs=48.4
Q ss_pred CeEEeCCEEEEe---ecC--------CCeeEEeCcccCCCCCCCCcc---c---c----CCceEEEeC------------
Q 031614 49 KTFEVGDSVMFN---WST--------THNVADVSKSEYDDCSKTSSV---V---A----SHPVQIQLN------------ 95 (156)
Q Consensus 49 ~tF~vGD~L~F~---y~~--------~H~V~~V~~~~y~~C~~~~~~---~---~----~G~~~v~L~------------ 95 (156)
..+++||.|-+- |.. ...++.|++++|++|+..... + + .|..++++.
T Consensus 23 i~V~i~D~lDIiCP~~~~~~~~~~~E~~~lY~Vs~~~y~~C~~~~~~~~~~~C~~P~~p~~~~kftikFq~fsP~p~G~E 102 (138)
T 1shx_A 23 IDVCINDYLDVFCPHYEDSVPEDKTERYVLYMVNFDGYSACDHTSKGFKRWECNRPHSPNGPLKFSEKFQLFTPFSLGFE 102 (138)
T ss_dssp EEECTTCEEEEECCCCCTTCCSTTCCCEEEEEECHHHHHTTCSSSSEEEEEEECCTTCTTSSCEEEEECCSCCSSTTCCC
T ss_pred EEecCCCEEEEECCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCCEEEEeCCCCCCCCCeEEEEEEEEcCCCCCcee
Confidence 668899999875 321 256789999999999875432 1 1 144444332
Q ss_pred -Ccc-cEEEEcCCC-----CCcCCCCeEEEEecCC
Q 031614 96 -STG-SRYFICTVD-----DHCGRGQKLAITVKNS 123 (156)
Q Consensus 96 -~~G-~~YFiC~v~-----~hC~~GmKl~I~V~~~ 123 (156)
+|| .||||++-. +.| |||+|.|.+.
T Consensus 103 F~pG~~YY~ISts~~~~~g~~C---lrL~V~V~p~ 134 (138)
T 1shx_A 103 FRPGREYFYISSAIPDNGRRSC---LKLKVFVRPT 134 (138)
T ss_dssp CCTTEEEEEEEEESSCCSCSCC---CEEEEEECCT
T ss_pred ecCCCeEEEEEcCCCCCCCCce---eEEEEEEEcc
Confidence 367 678886533 345 9999999865
No 43
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=95.87 E-value=0.027 Score=43.31 Aligned_cols=68 Identities=18% Similarity=0.215 Sum_probs=46.8
Q ss_pred CCCeEEeCCEEEEeecC---CCeeEEeCcccCCCCCCCCcc-ccCCc---eEEEeCCcccEEEEcCC-CCCcCCCCeEEE
Q 031614 47 SNKTFEVGDSVMFNWST---THNVADVSKSEYDDCSKTSSV-VASHP---VQIQLNSTGSRYFICTV-DDHCGRGQKLAI 118 (156)
Q Consensus 47 ~~~tF~vGD~L~F~y~~---~H~V~~V~~~~y~~C~~~~~~-~~~G~---~~v~L~~~G~~YFiC~v-~~hC~~GmKl~I 118 (156)
+...+.+|+.+.|..++ -|+...-+. + -.. ...|. ..++.++||.||+.|+. -|+-..+|+..|
T Consensus 93 n~l~VP~G~~Vr~~vTS~DViHsf~IP~l-g-------ik~da~PG~~n~~~~~~~kpG~y~g~Cse~CG~~Hs~M~g~V 164 (168)
T 3s8f_B 93 NPIEVPQGAEIVFKITSPDVIHGFHVEGT-N-------INVEVLPGEVSTVRYTFKRPGEYRIICNQYCGLGHQNMFGTI 164 (168)
T ss_dssp SSEEEETTSEEEEEEECSSSCEEEEETTS-S-------CEEEECTTBCEEEEEECCSCEEEEEECCSCCSTTGGGCEEEE
T ss_pred CEEEEeCCCeEEEEEecCCceEEEEECCC-C-------eEEEecCCceeEEEEEeCCCEEEEEECCcCCCCCcCCCEEEE
Confidence 34778999999998876 388764211 1 011 23343 46889999999999995 344445699999
Q ss_pred EecC
Q 031614 119 TVKN 122 (156)
Q Consensus 119 ~V~~ 122 (156)
.|.+
T Consensus 165 ~V~e 168 (168)
T 3s8f_B 165 VVKE 168 (168)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 9863
No 44
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=95.51 E-value=0.12 Score=38.07 Aligned_cols=69 Identities=19% Similarity=0.283 Sum_probs=42.1
Q ss_pred CeEEe-CCEEEEeecC-C--------CeeEEeCcc----------------cCCCCCCCCcc-----ccCCce-EEEeC-
Q 031614 49 KTFEV-GDSVMFNWST-T--------HNVADVSKS----------------EYDDCSKTSSV-----VASHPV-QIQLN- 95 (156)
Q Consensus 49 ~tF~v-GD~L~F~y~~-~--------H~V~~V~~~----------------~y~~C~~~~~~-----~~~G~~-~v~L~- 95 (156)
.++.. |+++.|.+.+ . |+++..+.. +|-.=+-.+-+ ...|.+ +++++
T Consensus 20 i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~~vtf~~ 99 (125)
T 3fsa_A 20 ITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDSVTFDV 99 (125)
T ss_dssp EEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEEEEEEEG
T ss_pred EEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEEEEEEeC
Confidence 44543 9999777764 3 999987322 22211111111 345553 45555
Q ss_pred ----CcccEEEEcCCCCCcCCCCeEEEEec
Q 031614 96 ----STGSRYFICTVDDHCGRGQKLAITVK 121 (156)
Q Consensus 96 ----~~G~~YFiC~v~~hC~~GmKl~I~V~ 121 (156)
++|.|-|+|+ +|= |||-.|+|.
T Consensus 100 ~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 100 SKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp GGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred cCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 5699999999 886 999999874
No 45
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=95.28 E-value=0.039 Score=47.05 Aligned_cols=73 Identities=15% Similarity=0.208 Sum_probs=51.8
Q ss_pred CCCeEEeCCEEEEeecC----CCeeEEeCcccCCCCCCCCccccCCce---EEEeCCcccEEEEcCCCCCcCCCCeEEEE
Q 031614 47 SNKTFEVGDSVMFNWST----THNVADVSKSEYDDCSKTSSVVASHPV---QIQLNSTGSRYFICTVDDHCGRGQKLAIT 119 (156)
Q Consensus 47 ~~~tF~vGD~L~F~y~~----~H~V~~V~~~~y~~C~~~~~~~~~G~~---~v~L~~~G~~YFiC~v~~hC~~GmKl~I~ 119 (156)
...+++.||+++|++.+ .|++..-.......|. ...|.. .|+++++|+++|.|..++|=..||+-.|.
T Consensus 55 p~i~v~~Gd~v~~~~~N~~~~~h~~~~~g~~~~~~~~-----i~pG~~~~~~f~~~~~Gt~~y~~~~~~h~~~Gm~G~i~ 129 (447)
T 2dv6_A 55 PTLVVHEGETVQVNLVNGEGAQHDVVVDQYAARSAIV-----NGKNASSTFSFVASKVGEFNYYCSIAGHRQAGMEGNIQ 129 (447)
T ss_dssp CCEEEETTCEEEEEEECSSSSCBCCEETTTTEECCCB-----CSTTBEEEEEEECCSCEEEEEECCSTTHHHHTCEEEEE
T ss_pred CeEEEcCCCEEEEEEEcCCCCceEEEEccCCccccee-----cCCCCeEEEEEEcCCCEEEEEEeCCCChhhCCCEEEEE
Confidence 35789999999999865 2777532222222232 233432 56678999999999999998889999999
Q ss_pred ecCCC
Q 031614 120 VKNSG 124 (156)
Q Consensus 120 V~~~~ 124 (156)
|....
T Consensus 130 V~~~~ 134 (447)
T 2dv6_A 130 VLPGN 134 (447)
T ss_dssp EESSC
T ss_pred EeCCc
Confidence 98654
No 46
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=95.11 E-value=0.049 Score=49.43 Aligned_cols=67 Identities=15% Similarity=0.160 Sum_probs=45.7
Q ss_pred CCeEEeCCEEEEeecC-------CCeeEEeCcccCCCCCCCCccccCCce---EEEeCCcccEEEEcCC---CCCcCCCC
Q 031614 48 NKTFEVGDSVMFNWST-------THNVADVSKSEYDDCSKTSSVVASHPV---QIQLNSTGSRYFICTV---DDHCGRGQ 114 (156)
Q Consensus 48 ~~tF~vGD~L~F~y~~-------~H~V~~V~~~~y~~C~~~~~~~~~G~~---~v~L~~~G~~YFiC~v---~~hC~~Gm 114 (156)
..+++.||++.|...+ .|++..-+ .+.+ + ....|.. .|+.++||.|||.|.. ..| .||
T Consensus 514 ~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~-~gv~-~-----~i~PG~t~t~~Fta~~pGtY~yhC~e~Cg~~H--~gM 584 (595)
T 1fwx_A 514 SFTVKEGDEVTVIVTNLDEIDDLTHGFTMGN-YGVA-M-----EIGPQMTSSVTFVAANPGVYWYYCQWFCHALH--MEM 584 (595)
T ss_dssp EEEEETTCEEEEEEEECCCSTTCCEEEEETT-TTEE-E-----EECTTCEEEEEEECCSCEEEEEECCSCCSTTC--TTC
T ss_pred EEEEECCCEEEEEEEeCCCCCCceeeEEecC-CCcc-e-----eeCCCCeEEEEEECCCCEEEEEECCCCCCCCc--cCC
Confidence 4678899999999755 37775322 1100 0 1334432 6788999999999984 345 499
Q ss_pred eEEEEecCC
Q 031614 115 KLAITVKNS 123 (156)
Q Consensus 115 Kl~I~V~~~ 123 (156)
+..|.|.+.
T Consensus 585 ~G~IiV~p~ 593 (595)
T 1fwx_A 585 RGRMLVEPK 593 (595)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEEcC
Confidence 999999864
No 47
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=94.44 E-value=0.092 Score=47.96 Aligned_cols=65 Identities=17% Similarity=0.351 Sum_probs=45.5
Q ss_pred CCeEEeCCEEEEeecC-------CCeeEEeCcccCCCCCCCCcc-ccCCc---eEEEeCCcccEEEEcCCCCCcCC---C
Q 031614 48 NKTFEVGDSVMFNWST-------THNVADVSKSEYDDCSKTSSV-VASHP---VQIQLNSTGSRYFICTVDDHCGR---G 113 (156)
Q Consensus 48 ~~tF~vGD~L~F~y~~-------~H~V~~V~~~~y~~C~~~~~~-~~~G~---~~v~L~~~G~~YFiC~v~~hC~~---G 113 (156)
..++.+||.+.|..++ .|+...-+.. -.. ...|. ..++.++||.|+|.|+. .|-. +
T Consensus 559 eI~VP~GdtVrfiLTN~D~veDViHSF~IPslG--------IK~DaiPGrtnsvtFtadkPGvY~y~CSE--~CGa~Hs~ 628 (638)
T 3sbq_A 559 EFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHG--------VSMEISPQQTSSITFVADKPGLHWYYCSW--FCHALHME 628 (638)
T ss_dssp EEEEETTCEEEEEEEECCCSTTCCEEEEETTTT--------EEEEECTTCEEEEEEECCSCEEEEEECCS--CCSTTCTT
T ss_pred EEEEecCceeEEEEecCCcCCCceeeeEecCCC--------ceeeeCCCCeEEEEEEcCCCEEEEEECCC--cCCCCccc
Confidence 5789999999998654 3777542111 011 33443 36788999999999997 5654 4
Q ss_pred CeEEEEecC
Q 031614 114 QKLAITVKN 122 (156)
Q Consensus 114 mKl~I~V~~ 122 (156)
|+..|.|++
T Consensus 629 M~G~ViVEP 637 (638)
T 3sbq_A 629 MVGRMMVEP 637 (638)
T ss_dssp CEEEEEEEC
T ss_pred ceEEEEEec
Confidence 999999975
No 48
>3hei_B Ephrin-A1; EPH receptor tyrosine kinase, cell membrane, disulfi glycoprotein, GPI-anchor, lipoprotein, membrane, ATP-bindin kinase; 2.00A {Homo sapiens} SCOP: b.6.1.0
Probab=93.22 E-value=0.067 Score=39.82 Aligned_cols=73 Identities=22% Similarity=0.252 Sum_probs=45.4
Q ss_pred CeEEeCCEEEEeecC------------CCeeEEeCcccCCCCCCCC-cc--c-------cCCceEEEeC-----------
Q 031614 49 KTFEVGDSVMFNWST------------THNVADVSKSEYDDCSKTS-SV--V-------ASHPVQIQLN----------- 95 (156)
Q Consensus 49 ~tF~vGD~L~F~y~~------------~H~V~~V~~~~y~~C~~~~-~~--~-------~~G~~~v~L~----------- 95 (156)
..+.+||.|-+-=+. ...++.|++++|++|+... +. + ..|+.++++.
T Consensus 22 v~V~i~D~LDIiCP~y~~~~~~~~~~E~y~LY~Vs~~~y~~C~~~~~~~~~~~C~~P~~~~~~~kft~kFQ~FSP~p~G~ 101 (132)
T 3hei_B 22 IHVQLNDYVDIICPHYEDHSVADAAMEQYILYLVEHEEYQLCQPQSKDQVRWQCNRPSAKHGPEKLSEKFQRFTPFTLGK 101 (132)
T ss_dssp EEECTTCEEEEECCCCCTTSSCGGGCCCEEEEEECHHHHHHTCCSCGGGEEEEECCTTCTTSCCEEEEECCSCCSCTTSC
T ss_pred EEeCCCCeEEEECCCCCCCCCCCCCccEEEEEEeCHHHhccccCCCCCcEEEEeCCCCCCCCceEEEEEEEEcCCCCCCe
Confidence 667899999774321 1567889999999998765 22 1 2345444332
Q ss_pred --Ccc-cEEEEcCCCCCcCCC-CeEEEEec
Q 031614 96 --STG-SRYFICTVDDHCGRG-QKLAITVK 121 (156)
Q Consensus 96 --~~G-~~YFiC~v~~hC~~G-mKl~I~V~ 121 (156)
+|| .||||++-..|=..+ +||.|.|.
T Consensus 102 EF~pG~~YY~ISt~~~~~~~~cl~l~v~v~ 131 (132)
T 3hei_B 102 EFKEGHSYYYISKPIHQHEDRCLRLKVTVK 131 (132)
T ss_dssp CCCTTCEEEEEEEESSCCCCSCCEEEEEEC
T ss_pred eecCCCcEEEEEccCCCCCCcceEEEEEEE
Confidence 367 677887732222211 78888774
No 49
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=77.34 E-value=3.7 Score=33.45 Aligned_cols=74 Identities=15% Similarity=0.148 Sum_probs=47.3
Q ss_pred CeEEeCCEEEEeecCC------CeeEEeCcccCCCCCCCCccccCCce---EEEeCCcccEEEEcCCCC-----CcCCCC
Q 031614 49 KTFEVGDSVMFNWSTT------HNVADVSKSEYDDCSKTSSVVASHPV---QIQLNSTGSRYFICTVDD-----HCGRGQ 114 (156)
Q Consensus 49 ~tF~vGD~L~F~y~~~------H~V~~V~~~~y~~C~~~~~~~~~G~~---~v~L~~~G~~YFiC~v~~-----hC~~Gm 114 (156)
.+++.||++++++.+. |.+..-...+.+.-..-.. ...|.. .|+.+++|++||-|...+ |=..||
T Consensus 66 i~~~~Gd~v~v~~~N~~~~~h~Hg~~~~~~~~~~~~~~~~~-i~PG~~~~y~f~~~~~Gt~~yH~h~~~~~~~~~~~~Gl 144 (333)
T 1mzy_A 66 MIVHEGDYVELTLINPPENTMPHNIDFHAATGALGGGGLTL-INPGEKVVLRFKATRAGAFVYHCAPGGPMIPWHVVSGM 144 (333)
T ss_dssp EEEETTCEEEEEEEECTTCCSCBCCEETTSCSGGGGGGGCC-BCTTEEEEEEEECCSCEEEEEECCCSTTHHHHHHHTTC
T ss_pred EEecCCCEEEEEEEECCCCcccccceecCCCCCCCCCceeE-eCCCCEEEEEEECCCCEEEEEeecCCcccchhhhhCCC
Confidence 5678999999988651 6765422111110000001 344443 577789999999998864 667899
Q ss_pred eEEEEecCC
Q 031614 115 KLAITVKNS 123 (156)
Q Consensus 115 Kl~I~V~~~ 123 (156)
.-.+.|.+.
T Consensus 145 ~G~~iV~~~ 153 (333)
T 1mzy_A 145 AGCIMVLPR 153 (333)
T ss_dssp EEEEEEECT
T ss_pred EEEEEEccC
Confidence 998888754
No 50
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=71.67 E-value=6.3 Score=32.02 Aligned_cols=72 Identities=17% Similarity=0.216 Sum_probs=46.3
Q ss_pred CeEEeCCEEEEeecC------CCeeEEeCcccCCCCCCCCcc--ccCCce---EEEeCCcccEEEEcCCCC----CcCCC
Q 031614 49 KTFEVGDSVMFNWST------THNVADVSKSEYDDCSKTSSV--VASHPV---QIQLNSTGSRYFICTVDD----HCGRG 113 (156)
Q Consensus 49 ~tF~vGD~L~F~y~~------~H~V~~V~~~~y~~C~~~~~~--~~~G~~---~v~L~~~G~~YFiC~v~~----hC~~G 113 (156)
.+++.||++++++.+ .|++..=..... +...+. ...|.. .++.+++|++||-|...+ |=..|
T Consensus 67 i~v~~Gd~v~v~~~N~~~~~~~h~~~~h~~~~~---~~~~~~~~i~pG~~~~y~f~~~~~Gt~~yH~h~~~~~~~~~~~G 143 (336)
T 1oe1_A 67 LVVHEGDYVQLTLVNPATNAMPHNVDFHGATGA---LGGAKLTNVNPGEQATLRFKADRSGTFVYHCAPEGMVPWHVVSG 143 (336)
T ss_dssp EEEETTCEEEEEEEECTTCCSCBCCEETTSCSG---GGGGGGCCBCTTEEEEEEEECCSCEEEEEECCCTTCHHHHHHTT
T ss_pred EEEcCCCEEEEEEEcCCCCCccccceECCCCCC---CCCcceEEeCCCCEEEEEEECCCCeEEEEecCCCCchhHHHhCC
Confidence 567899999988855 266654211100 000111 344443 567789999999999754 45689
Q ss_pred CeEEEEecCC
Q 031614 114 QKLAITVKNS 123 (156)
Q Consensus 114 mKl~I~V~~~ 123 (156)
|.-.+.|.+.
T Consensus 144 l~G~liV~~~ 153 (336)
T 1oe1_A 144 MSGTLMVLPR 153 (336)
T ss_dssp CEEEEEEECT
T ss_pred CeEEEEEecC
Confidence 9999988754
No 51
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=71.49 E-value=2.8 Score=34.20 Aligned_cols=34 Identities=12% Similarity=0.023 Sum_probs=30.0
Q ss_pred EEEeCCcccEEEEcCCCCCc-CCCCeEEEEecCCC
Q 031614 91 QIQLNSTGSRYFICTVDDHC-GRGQKLAITVKNSG 124 (156)
Q Consensus 91 ~v~L~~~G~~YFiC~v~~hC-~~GmKl~I~V~~~~ 124 (156)
.++.++||.++|.|....|+ ..||.-.+.|....
T Consensus 286 lv~~~~pG~y~~~~h~~~~~~~~G~~~~~~V~~~~ 320 (336)
T 1oe1_A 286 LYTFKQPGVYAYLNHNLIEAFELGAAGHIKVEGKW 320 (336)
T ss_dssp EEECCSCEEEEEEESSHHHHHTTSCEEEEEEESCC
T ss_pred EEEcCCCceEEEEechhhccccCCCeEEEEECCCC
Confidence 67888999999999988898 89999999998654
No 52
>3l6w_A Hemocyanin 1; cupredoxin domain, copper-binding protein, metal-binding, oxygen binding; 4.00A {Megathura crenulata} PDB: 3qjo_A
Probab=70.62 E-value=3 Score=37.05 Aligned_cols=72 Identities=13% Similarity=0.273 Sum_probs=48.9
Q ss_pred CCeEEeCCEEEEeecC---CCeeEEe-CcccCCCCCCCCccc---cCCceEEEeCCcccEEEEcCCCCCcCCCC-eEEEE
Q 031614 48 NKTFEVGDSVMFNWST---THNVADV-SKSEYDDCSKTSSVV---ASHPVQIQLNSTGSRYFICTVDDHCGRGQ-KLAIT 119 (156)
Q Consensus 48 ~~tF~vGD~L~F~y~~---~H~V~~V-~~~~y~~C~~~~~~~---~~G~~~v~L~~~G~~YFiC~v~~hC~~Gm-Kl~I~ 119 (156)
+.-++.|..++|.=-. +.-++.+ +-++...|....-.+ .-| ....|+ ||.|||..+...-|++|- ++.|.
T Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 489 (491)
T 3l6w_A 412 KVVVKRGTKIMFMSVDEAVTTPMLNLGSYTAMFKCKVPPFSFHAFELG-KMYSVE-SGDYFMTASTTELCNDNNLRIHVH 489 (491)
T ss_pred eeEeecCCEEEEEecccchhhHHHhhhhhhhhhccccCCCccCccccc-ceEecC-CCceEecCChHHHHhCCceeEEEE
Confidence 3567889999985433 2334444 556667798764332 222 233444 899999999999999997 99998
Q ss_pred ec
Q 031614 120 VK 121 (156)
Q Consensus 120 V~ 121 (156)
|.
T Consensus 490 ~~ 491 (491)
T 3l6w_A 490 VD 491 (491)
T ss_pred eC
Confidence 84
No 53
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=69.21 E-value=3 Score=35.30 Aligned_cols=75 Identities=21% Similarity=0.226 Sum_probs=44.6
Q ss_pred CCeEEeCCEEEEeecC------CCeeEEeCcccCCCCCCCCcc-ccCCce---EEEeCCcccEEEEcC---CCCCcCCCC
Q 031614 48 NKTFEVGDSVMFNWST------THNVADVSKSEYDDCSKTSSV-VASHPV---QIQLNSTGSRYFICT---VDDHCGRGQ 114 (156)
Q Consensus 48 ~~tF~vGD~L~F~y~~------~H~V~~V~~~~y~~C~~~~~~-~~~G~~---~v~L~~~G~~YFiC~---v~~hC~~Gm 114 (156)
..+++.||++++++.+ .|++..=.-...+. ..... ...|.. .|+.+++|++||-|- ...|=..||
T Consensus 61 ~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~~~dG--~~~~~~i~pg~~~~y~f~~~~~Gt~~yH~H~~~~~~~~~~Gl 138 (442)
T 2zoo_A 61 FIRVREGDEIEFNLSNHPSSKMPHNIDLHAVTGPGG--GAESSFTAPGHTSTFNFKALNPGLYIYHCATAPVGMHIANGM 138 (442)
T ss_dssp BEEEETTCEEEEEEEECTTCSSCBCCEETTCCSGGG--GGGGCCBCTTCEEEEEEECCSCEEEEEECCCSSHHHHHHTTC
T ss_pred cEEEeCCCEEEEEEEECCCCCCCCCEEecCCcCCCC--CCccEEECCCCEEEEEEEcCCCeEEEEecCCCChHHHHhCcc
Confidence 3567899999998754 14443211000000 00001 333433 567789999999994 345667899
Q ss_pred eEEEEecCCC
Q 031614 115 KLAITVKNSG 124 (156)
Q Consensus 115 Kl~I~V~~~~ 124 (156)
.-.+.|.+..
T Consensus 139 ~G~~iv~~~~ 148 (442)
T 2zoo_A 139 YGLILVEPKE 148 (442)
T ss_dssp EEEEEEECTT
T ss_pred EEEEEEeCCC
Confidence 9999888654
No 54
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=68.83 E-value=6.7 Score=31.99 Aligned_cols=77 Identities=9% Similarity=0.073 Sum_probs=47.9
Q ss_pred CCeEEeCCEEEEeecC-----CCeeEEeC--------cccCCCCCCCCcc-ccCCce---EEEeCCcccEEEEcCCCCCc
Q 031614 48 NKTFEVGDSVMFNWST-----THNVADVS--------KSEYDDCSKTSSV-VASHPV---QIQLNSTGSRYFICTVDDHC 110 (156)
Q Consensus 48 ~~tF~vGD~L~F~y~~-----~H~V~~V~--------~~~y~~C~~~~~~-~~~G~~---~v~L~~~G~~YFiC~v~~hC 110 (156)
..+++.|++++|+.-+ .|.+.... ...+-.=...+.+ ...|.. .++.+++|.+++.|....||
T Consensus 215 ~l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f~vi~~DG~~~~p~~~d~l~l~pGer~dv~v~~~~pG~y~l~~h~~~~~ 294 (327)
T 1kbv_A 215 ALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYVEGGKLINENVQSTIVPAGGSAIVEFKVDIPGNYTLVDHSIFRA 294 (327)
T ss_dssp CEEEETTEEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSSCEECSBSEEEECTTEEEEEEEEECSCEEEEEEESSTHHH
T ss_pred eEEeCCCCEEEEEEECCCCCCceeEEEeCCEEEEEEcCCCcCCCCceeEEEECCCCEEEEEEEeCCCeEEEEEecccccc
Confidence 3578889999998753 14443321 1111110000111 334442 57788999999999999998
Q ss_pred -CCCCeEEEEecCCC
Q 031614 111 -GRGQKLAITVKNSG 124 (156)
Q Consensus 111 -~~GmKl~I~V~~~~ 124 (156)
..||.-.+.+....
T Consensus 295 ~~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 295 FNKGALGQLKVEGAE 309 (327)
T ss_dssp HHSSCEEEEEEESCC
T ss_pred ccCCcEEEEEECCCC
Confidence 78998888887654
No 55
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=68.40 E-value=11 Score=30.02 Aligned_cols=78 Identities=19% Similarity=0.184 Sum_probs=48.6
Q ss_pred CCeEEeCCEEEEeecC----CCeeEE------e-CcccCCCCCC----CCcc-ccCCce---EEEeC---CcccEEEEcC
Q 031614 48 NKTFEVGDSVMFNWST----THNVAD------V-SKSEYDDCSK----TSSV-VASHPV---QIQLN---STGSRYFICT 105 (156)
Q Consensus 48 ~~tF~vGD~L~F~y~~----~H~V~~------V-~~~~y~~C~~----~~~~-~~~G~~---~v~L~---~~G~~YFiC~ 105 (156)
..+++.||++++...+ .|.+.. + ....++.-.. .+.+ ...|.. .+..+ .||.++|-|-
T Consensus 169 ~i~v~~G~~vri~l~N~~~~~Hp~HlHG~~f~v~~~G~~~~p~~~~~~~Dtv~v~pg~~~~~~~~~~~~~npG~w~~HCH 248 (276)
T 3kw8_A 169 DFEATVGDRVEIVMITHGEYYHTFHMHGHRWADNRTGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCH 248 (276)
T ss_dssp CEEEETTCEEEEEEEEESSCCEEEEETTCCEESSSSSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEEC
T ss_pred CEEEecCCEEEEEEecCCCcceeEEEccceeEEeccCccCCCcccccCCccEEeCCCceEEEEEEeccCCCCCeEEEECC
Confidence 4688999999988854 254432 2 1111111100 0111 233332 34554 5999999999
Q ss_pred CCCCcCCCCeEEEEecCCCC
Q 031614 106 VDDHCGRGQKLAITVKNSGN 125 (156)
Q Consensus 106 v~~hC~~GmKl~I~V~~~~~ 125 (156)
+..|=..||...+.|.+...
T Consensus 249 ~~~H~~~GM~g~~~V~~~~~ 268 (276)
T 3kw8_A 249 VQSHSDMGMVGLFLVKKPDG 268 (276)
T ss_dssp SHHHHHTTCEEEEEEECTTS
T ss_pred CchHhhCCCeEEEEEeCCCC
Confidence 99999999999999987653
No 56
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=68.06 E-value=18 Score=28.87 Aligned_cols=76 Identities=13% Similarity=0.244 Sum_probs=46.4
Q ss_pred CeEEeCCEEEEeecC----CCeeEEeC--cccCCCC-CCCCccccCCce---EEEeCCcccEEEEcCCC---CCcCCCCe
Q 031614 49 KTFEVGDSVMFNWST----THNVADVS--KSEYDDC-SKTSSVVASHPV---QIQLNSTGSRYFICTVD---DHCGRGQK 115 (156)
Q Consensus 49 ~tF~vGD~L~F~y~~----~H~V~~V~--~~~y~~C-~~~~~~~~~G~~---~v~L~~~G~~YFiC~v~---~hC~~GmK 115 (156)
.+++.||+++.++.+ .|++.-=- ....|.= ..+......|.+ .++.+++|++||-|-.. .|=..||.
T Consensus 68 i~~~~Gd~v~v~~~N~~~~~~~iH~HG~~~~~~DG~p~~~~~~i~PG~~~~y~f~~~~~Gt~~yH~H~~~~~~~~~~Gl~ 147 (288)
T 3gdc_A 68 LWAREGDALRIHFTNAGAHPHTIHFHGVHRATMDGTPGIGAGSIAPGQSFTYEFDATPFGTHLYHCHQSPLAPHIAKGLY 147 (288)
T ss_dssp EEEETTCEEEEEEEECSSSCBCCEESSCCCGGGSCCTTSTTCSBCTTCEEEEEEECCSCEEEEEECCCSSHHHHHHTTCE
T ss_pred EEEeCCCEEEEEEEeCCCCcccEEeccccccccCCCCCccceeECCCCEEEEEEEcCCCccEEEEecCcchHHHHhCcCe
Confidence 668899999998865 24443211 1111110 000001333443 57778999999999876 35678999
Q ss_pred EEEEecCCC
Q 031614 116 LAITVKNSG 124 (156)
Q Consensus 116 l~I~V~~~~ 124 (156)
-.+.|.+..
T Consensus 148 G~liV~~~~ 156 (288)
T 3gdc_A 148 GGFIVEPKE 156 (288)
T ss_dssp EEEEEECSS
T ss_pred EEEEEeCCc
Confidence 999887654
No 57
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=66.68 E-value=16 Score=32.02 Aligned_cols=77 Identities=17% Similarity=0.273 Sum_probs=48.9
Q ss_pred CCeEEeCCEEEEeecC--C--------CeeEEeCcccCCC-CCCCCccccCCce---EEEeC-CcccEEEEcCCCCCcCC
Q 031614 48 NKTFEVGDSVMFNWST--T--------HNVADVSKSEYDD-CSKTSSVVASHPV---QIQLN-STGSRYFICTVDDHCGR 112 (156)
Q Consensus 48 ~~tF~vGD~L~F~y~~--~--------H~V~~V~~~~y~~-C~~~~~~~~~G~~---~v~L~-~~G~~YFiC~v~~hC~~ 112 (156)
..+++.||+|+.++.+ . |.+.+-.....|. -..++.-...|.+ .++.+ ++|++||-|-...|=..
T Consensus 35 ~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq~pI~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~ 114 (534)
T 1zpu_A 35 DITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQCPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYED 114 (534)
T ss_dssp CEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECSSCCEEEEEECCSSSGGGG
T ss_pred cEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCccccCCcCCCCeEEEEEEeCccceeEEEEEcCcccccC
Confidence 3678899999999876 2 3333210001111 0000000233443 67777 89999999999888888
Q ss_pred CCeEEEEecCCC
Q 031614 113 GQKLAITVKNSG 124 (156)
Q Consensus 113 GmKl~I~V~~~~ 124 (156)
||.-.+.|.+..
T Consensus 115 Gl~G~liV~~~~ 126 (534)
T 1zpu_A 115 GMKGLFIIKDDS 126 (534)
T ss_dssp TCEEEEEEECTT
T ss_pred cceeeEEeCCCC
Confidence 999999998764
No 58
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=64.26 E-value=9.5 Score=31.07 Aligned_cols=76 Identities=20% Similarity=0.227 Sum_probs=45.4
Q ss_pred CCeEEeCCEEEEeecCC------CeeEEeCcccCCCCCCCCccccCCce---EEEeCCcccEEEEcCCC---CCcCCCCe
Q 031614 48 NKTFEVGDSVMFNWSTT------HNVADVSKSEYDDCSKTSSVVASHPV---QIQLNSTGSRYFICTVD---DHCGRGQK 115 (156)
Q Consensus 48 ~~tF~vGD~L~F~y~~~------H~V~~V~~~~y~~C~~~~~~~~~G~~---~v~L~~~G~~YFiC~v~---~hC~~GmK 115 (156)
..+++.||++++++.+. |++..=.....+. .........|.. .++.+++|++||-|... .|=..||.
T Consensus 71 ~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~~~dG-~~~~~~i~PG~~~~y~f~~~~~Gt~wyH~h~~~~~~~~~~Gl~ 149 (327)
T 1kbv_A 71 MIRVREGDTVEVEFSNNPSSTVPHNVDFHAATGQGG-GAAATFTAPGRTSTFSFKALQPGLYIYHCAVAPVGMHIANGMY 149 (327)
T ss_dssp BEEEETTCEEEEEEEECTTCSSCBCCEETTCCSGGG-GTTTTCBCTTEEEEEEEECCSCEEEEEECCCSSHHHHHHTTCE
T ss_pred eEEEeCCCEEEEEEEECCCCCCceeeEeCccccCCC-CCcceeecCCCEEEEEEECCCCeEEEEEeCCCChhhhhhcceE
Confidence 36788999999987541 4443210000000 000011334443 56778999999999763 35568999
Q ss_pred EEEEecCCC
Q 031614 116 LAITVKNSG 124 (156)
Q Consensus 116 l~I~V~~~~ 124 (156)
-.+.|.++.
T Consensus 150 G~~iV~~~~ 158 (327)
T 1kbv_A 150 GLILVEPKE 158 (327)
T ss_dssp EEEEEECTT
T ss_pred EEEEEecCC
Confidence 999998654
No 59
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=60.78 E-value=23 Score=30.93 Aligned_cols=77 Identities=13% Similarity=0.205 Sum_probs=48.5
Q ss_pred CCeEEeCCEEEEeecC--C--------CeeEEeCcccCCC-CCCCCccccCCce---EEEeCCcccEEEEcCCCCCcCCC
Q 031614 48 NKTFEVGDSVMFNWST--T--------HNVADVSKSEYDD-CSKTSSVVASHPV---QIQLNSTGSRYFICTVDDHCGRG 113 (156)
Q Consensus 48 ~~tF~vGD~L~F~y~~--~--------H~V~~V~~~~y~~-C~~~~~~~~~G~~---~v~L~~~G~~YFiC~v~~hC~~G 113 (156)
..+++.||+|+.++.+ . |.+.+-.....|. -..++.-...|.+ .++++++|++||=|-...+=..|
T Consensus 35 ~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq~~I~PG~s~tY~f~~~~~GT~wYHsH~~~q~~~G 114 (552)
T 1aoz_A 35 TIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQCAINPGETFFYNFTVDNPGTFFYHGHLGMQRSAG 114 (552)
T ss_dssp CEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECCSCEEEEEEECSTTTGGGT
T ss_pred cEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCcccccCCcCCCCeEEEEEECCCCEEEEEEECchhHHhcc
Confidence 4678999999999865 2 2222211100111 0000000233443 67788999999999998888899
Q ss_pred CeEEEEecCCC
Q 031614 114 QKLAITVKNSG 124 (156)
Q Consensus 114 mKl~I~V~~~~ 124 (156)
|--.+.|.++.
T Consensus 115 l~G~liV~~~~ 125 (552)
T 1aoz_A 115 LYGSLIVDPPQ 125 (552)
T ss_dssp CEEEEEEECCT
T ss_pred CeeeEEEeCCc
Confidence 99999998753
No 60
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=60.43 E-value=5.1 Score=32.59 Aligned_cols=34 Identities=9% Similarity=0.060 Sum_probs=30.2
Q ss_pred EEEeCCcccEEEEcCCCCCc-CCCCeEEEEecCCC
Q 031614 91 QIQLNSTGSRYFICTVDDHC-GRGQKLAITVKNSG 124 (156)
Q Consensus 91 ~v~L~~~G~~YFiC~v~~hC-~~GmKl~I~V~~~~ 124 (156)
.++.++||.++|.|-...|+ +.||.-.+.|....
T Consensus 286 ~v~a~~pG~y~~~ch~~~h~~~~Gm~~~~~v~~~~ 320 (333)
T 1mzy_A 286 LYKFLQPGVYAYVNHNLIEAVHKGATAHVLVEGEW 320 (333)
T ss_dssp EEECCSCEEEEEEESSHHHHHTTCCEEEEEEESCC
T ss_pred EEEcCCCEEEEEecChhhhHhhCCCEEEEEEcCCC
Confidence 57888999999999998999 99999999998654
No 61
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=59.20 E-value=8.4 Score=31.87 Aligned_cols=66 Identities=12% Similarity=0.192 Sum_probs=44.1
Q ss_pred CeEEeCCEEEEeecC---CCeeEEeCcccCCCCCCCCcc-ccCCc---eEEEeCCcccEEEEcCCCCCcCC---CCeEEE
Q 031614 49 KTFEVGDSVMFNWST---THNVADVSKSEYDDCSKTSSV-VASHP---VQIQLNSTGSRYFICTVDDHCGR---GQKLAI 118 (156)
Q Consensus 49 ~tF~vGD~L~F~y~~---~H~V~~V~~~~y~~C~~~~~~-~~~G~---~~v~L~~~G~~YFiC~v~~hC~~---GmKl~I 118 (156)
..+.+|+.++|.-++ -|+-..-+-. -.. .-.|. ..++.++||.||..|+. -|-. .|++.|
T Consensus 191 lvlP~g~~V~~~ltS~DViHsf~iP~lg--------~k~daiPG~~n~~~~~~~~~G~y~g~CsE--~CG~~Hs~M~~~v 260 (298)
T 3hb3_B 191 VVVPVGKKVLVQVTATDVIHAWTIPAFA--------VKQDAVPGRIAQLWFSVDQEGVYFGQCSE--LCGINHAYMPIVV 260 (298)
T ss_dssp EEEESSSEEEEEEEESSSCEEEEEGGGT--------EEEEECTTCCEEEEEECSSSEEEEECCCS--CCSTTTTSCCEEE
T ss_pred EEEEcCCEEEEEEEeCCccceeeEcccC--------ceEEecCCceEEEEEEeCCCEEEEEEccc--ccCcCccCCeeEE
Confidence 557788999988876 2776541110 001 22333 36888999999999985 5654 499999
Q ss_pred EecCCC
Q 031614 119 TVKNSG 124 (156)
Q Consensus 119 ~V~~~~ 124 (156)
.|.+..
T Consensus 261 ~vvs~~ 266 (298)
T 3hb3_B 261 KAVSQE 266 (298)
T ss_dssp EEECHH
T ss_pred EEEcHH
Confidence 988654
No 62
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=58.74 E-value=20 Score=29.23 Aligned_cols=77 Identities=21% Similarity=0.336 Sum_probs=44.7
Q ss_pred CCeEEeCCEEEEeecC--C--Ce-----eEEeCcccCCCC-CCCCccccCCce---EEEeCCcccEEEEcCCCC--CcC-
Q 031614 48 NKTFEVGDSVMFNWST--T--HN-----VADVSKSEYDDC-SKTSSVVASHPV---QIQLNSTGSRYFICTVDD--HCG- 111 (156)
Q Consensus 48 ~~tF~vGD~L~F~y~~--~--H~-----V~~V~~~~y~~C-~~~~~~~~~G~~---~v~L~~~G~~YFiC~v~~--hC~- 111 (156)
..+++.||+++++..+ . ++ +.+......|.= ..+......|.. .|+.+++|++||-|.... +=.
T Consensus 36 ~I~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGvp~vtq~~I~PG~~~~y~f~~~~~Gt~wyH~H~~~~~q~~~ 115 (339)
T 2zwn_A 36 LIHVQEGDDVIVNVTNNTSLPHTIHWHGVHQKGTWRSDGVPGVTQQPIEAGDSYTYKFKADRIGTLWYHCHVNVNEHVGV 115 (339)
T ss_dssp EEEEETTCEEEEEEEEESSSCBCCEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECCSCEEEEEECCSSHHHHTTT
T ss_pred eEEEECCCEEEEEEEECCCCCccEEeCCCCcCCCcccCCCCccccCccCCCCeEEEEEECCCCEEEEEEecCCchhhhhc
Confidence 3678899999999865 1 33 322211001110 000000233443 678889999999997654 334
Q ss_pred CCCeEEEEecCCC
Q 031614 112 RGQKLAITVKNSG 124 (156)
Q Consensus 112 ~GmKl~I~V~~~~ 124 (156)
.||--.+.|.+..
T Consensus 116 ~Gl~G~liV~p~~ 128 (339)
T 2zwn_A 116 RGMWGPLIVDPKQ 128 (339)
T ss_dssp SCCEEEEEEECSS
T ss_pred CCceEeEEecCCC
Confidence 7998888887543
No 63
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=57.61 E-value=15 Score=29.69 Aligned_cols=72 Identities=17% Similarity=0.177 Sum_probs=46.4
Q ss_pred CeEEeCCEEEEeecC------CCeeEEeCcccCCCCCCCCcc--ccCCce---EEEeCCcccEEEEcCCCC----CcCCC
Q 031614 49 KTFEVGDSVMFNWST------THNVADVSKSEYDDCSKTSSV--VASHPV---QIQLNSTGSRYFICTVDD----HCGRG 113 (156)
Q Consensus 49 ~tF~vGD~L~F~y~~------~H~V~~V~~~~y~~C~~~~~~--~~~G~~---~v~L~~~G~~YFiC~v~~----hC~~G 113 (156)
.+++.||++++++.+ .|.+..=.....+ + ..+. ...|.. .++++++|++||-|...+ |=..|
T Consensus 73 i~v~~Gd~v~v~~~N~~~~~~~hg~~~~~~~~~~--~-~~~~~~i~PG~~~~y~~~~~~~Gt~wyH~h~~~~~~~~~~~G 149 (340)
T 2bw4_A 73 MVVHENDYVELRLINPDTNTLLHNIDFHAATGAL--G-GGALTQVNPGEETTLRFKATKPGVFVYHCAPEGMVPWHVTSG 149 (340)
T ss_dssp EEEETTCEEEEEEEECTTCCSCBCCEETTSCSGG--G-GGGGCCBCTTEEEEEEEECCSCEEEEEECCCTTCHHHHHHTT
T ss_pred EEEcCCCEEEEEEEeCCCCCccCcceeCCcCCCC--C-CccceEeCCCCEEEEEEECCCCeEEEEEcCCCCchhhHHhCc
Confidence 567899999998865 1666532111100 0 0111 344443 577789999999999764 56689
Q ss_pred CeEEEEecCC
Q 031614 114 QKLAITVKNS 123 (156)
Q Consensus 114 mKl~I~V~~~ 123 (156)
|.-.+.|.+.
T Consensus 150 l~G~~iV~~~ 159 (340)
T 2bw4_A 150 MNGAIMVLPR 159 (340)
T ss_dssp CEEEEEEECT
T ss_pred CEEEEEEccC
Confidence 9888888754
No 64
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=56.99 E-value=9.8 Score=30.73 Aligned_cols=64 Identities=13% Similarity=0.183 Sum_probs=43.0
Q ss_pred CeEEeCCEEEEeecC---CCeeEEeCcccCCCCCCCCcc-ccCCc---eEEEeCCcccEEEEcCCCCCcCCC---CeEEE
Q 031614 49 KTFEVGDSVMFNWST---THNVADVSKSEYDDCSKTSSV-VASHP---VQIQLNSTGSRYFICTVDDHCGRG---QKLAI 118 (156)
Q Consensus 49 ~tF~vGD~L~F~y~~---~H~V~~V~~~~y~~C~~~~~~-~~~G~---~~v~L~~~G~~YFiC~v~~hC~~G---mKl~I 118 (156)
..+.+|+.++|.-++ -|+-..-+-. -.. .-.|. ..++.++||.||..|+. -|-.| |++.|
T Consensus 173 l~lP~g~~v~~~~tS~DViHsf~ip~l~--------~k~da~PG~~n~~~~~~~~~G~y~g~Cse--~CG~~H~~M~~~v 242 (262)
T 2gsm_B 173 MVVPVNKTVVVQVTGADVIHSWTVPAFG--------VKQDAVPGRLAQLWFRAEREGIFFGQCSE--LCGISHAYMPITV 242 (262)
T ss_dssp EEEETTSEEEEEEEESSSCEEEEEGGGT--------EEEEECBTCCEEEEEECCSCEEEEECCCS--CCSTTGGGCCEEE
T ss_pred EEEecCCEEEEEEEECcccceeeecccC--------ceEEecCCceeEEEEecCCcEEEEEEChH--hcccCcccCeEEE
Confidence 567889999988876 2776542111 000 22232 36888999999999985 67655 99998
Q ss_pred EecC
Q 031614 119 TVKN 122 (156)
Q Consensus 119 ~V~~ 122 (156)
.|.+
T Consensus 243 ~vv~ 246 (262)
T 2gsm_B 243 KVVS 246 (262)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 8875
No 65
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=56.99 E-value=9.5 Score=30.01 Aligned_cols=64 Identities=20% Similarity=0.316 Sum_probs=43.3
Q ss_pred CCeEEeCCEEEEeecC---CCeeEEeCcccCCCCCCCCcc-ccCCc---eEEEeCCcccEEEEcCCCCCcCC---CCeEE
Q 031614 48 NKTFEVGDSVMFNWST---THNVADVSKSEYDDCSKTSSV-VASHP---VQIQLNSTGSRYFICTVDDHCGR---GQKLA 117 (156)
Q Consensus 48 ~~tF~vGD~L~F~y~~---~H~V~~V~~~~y~~C~~~~~~-~~~G~---~~v~L~~~G~~YFiC~v~~hC~~---GmKl~ 117 (156)
...+.+|+.+.|.-++ -|+-..-+-. -.+ .-.|. ..++.+++|.||..|+. -|-. .|++.
T Consensus 42 ~l~lP~g~~V~~~lTS~DViHSF~IP~lg--------vK~daiPGr~n~l~~~~~~pG~y~g~CsE--~CG~~Hs~M~~~ 111 (205)
T 1cyx_A 42 EIAFPANTPVYFKVTSNSVMHSFFIPRLG--------SQIYAMAGMQTRLHLIANEPGTYDGICAE--ICGPGHSGMKFK 111 (205)
T ss_dssp EEEEETTSCEEEEEEESSSCEEEEEGGGT--------EEEEECTTCCEEEEECCSSSEEEEEEECS--CCSTTSTTCCEE
T ss_pred eEEEeCCCEEEEEEecCCceeeEEecccC--------cEEEecCCceEEEEEEeCCCeEEEEEccc--ccccchhhceEE
Confidence 3667899999999876 2776542111 001 22233 35778899999999985 6654 49999
Q ss_pred EEec
Q 031614 118 ITVK 121 (156)
Q Consensus 118 I~V~ 121 (156)
|.|.
T Consensus 112 v~vv 115 (205)
T 1cyx_A 112 AIAT 115 (205)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9988
No 66
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=55.40 E-value=8.9 Score=30.32 Aligned_cols=64 Identities=14% Similarity=0.169 Sum_probs=39.9
Q ss_pred CeEEeCCEEEEeecC---CCeeEEeCcccCCCCCCCCcc-ccCCc---eEEEeCCcccEEEEcCCCCCcCCC---CeEEE
Q 031614 49 KTFEVGDSVMFNWST---THNVADVSKSEYDDCSKTSSV-VASHP---VQIQLNSTGSRYFICTVDDHCGRG---QKLAI 118 (156)
Q Consensus 49 ~tF~vGD~L~F~y~~---~H~V~~V~~~~y~~C~~~~~~-~~~G~---~~v~L~~~G~~YFiC~v~~hC~~G---mKl~I 118 (156)
....+|+.++|.-++ -|+-..=+ -+. .. .-.|. ..++.++||.+|..|+. -|-.| |.+.|
T Consensus 142 lvlP~~~~Vr~~vtS~DViHsf~vP~-lg~-------K~DaiPGr~n~~~~~~~~~G~y~g~Cse--~CG~~Hs~M~~~v 211 (227)
T 1v54_B 142 VVLPMEMTIRMLVSSEDVLHSWAVPS-LGL-------KTDAIPGRLNQTTLMSSRPGLYYGQCSE--ICGSNHSFMPIVL 211 (227)
T ss_dssp EEEETTSCEEEEEEESSSCEEEEEGG-GTE-------EEEECTTCCEEEEECCSSCEEEEECCCS--CCSTTGGGCCEEE
T ss_pred EEEecCCEEEEEEEeCcccceeeecc-cCc-------EEEecCCceEEEEEecCCcEEEEEEehh--hcccccccCeEEE
Confidence 345667777777765 26654311 100 00 12233 25788999999999985 77665 99988
Q ss_pred EecC
Q 031614 119 TVKN 122 (156)
Q Consensus 119 ~V~~ 122 (156)
.|.+
T Consensus 212 ~vv~ 215 (227)
T 1v54_B 212 ELVP 215 (227)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 8875
No 67
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=55.39 E-value=18 Score=29.42 Aligned_cols=76 Identities=17% Similarity=0.267 Sum_probs=44.4
Q ss_pred CeEEeCCEEEEeecC----CCeeEEeC--cc---cCCCC-CCCCccccCCce---EEEeCCcccEEEEcCCCCC-c--CC
Q 031614 49 KTFEVGDSVMFNWST----THNVADVS--KS---EYDDC-SKTSSVVASHPV---QIQLNSTGSRYFICTVDDH-C--GR 112 (156)
Q Consensus 49 ~tF~vGD~L~F~y~~----~H~V~~V~--~~---~y~~C-~~~~~~~~~G~~---~v~L~~~G~~YFiC~v~~h-C--~~ 112 (156)
.+++.||+|+.++.+ .|++.-=. .. ..|.= ..++.....|.. .++.+++|++||-|..... . ..
T Consensus 36 i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~p~~t~~~i~PG~~~~y~f~~~~~Gt~wYH~H~~~~~~~~~~ 115 (318)
T 3g5w_A 36 IHVMEGDDVTVNVTNMTTLPHTIHWHGMLQRGTWQSDGVPHATQHAIEPGDTFTYKFKAEPAGTMWYHCHVNVNEHVTMR 115 (318)
T ss_dssp EEEETTCEEEEEEEECSSSCBCCEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECCSCEEEEEECCSSHHHHHHHS
T ss_pred EEEeCCCEEEEEEEeCCCCceeEEecCcCCCCCcccCCCcccccccCCCCCEEEEEEEcCCCEEEEEEccCChhhhhccC
Confidence 678899999999965 24443211 00 11110 000000233443 5778899999999987422 1 26
Q ss_pred CCeEEEEecCCC
Q 031614 113 GQKLAITVKNSG 124 (156)
Q Consensus 113 GmKl~I~V~~~~ 124 (156)
||.-.+.|.+..
T Consensus 116 Gl~G~lIV~~~~ 127 (318)
T 3g5w_A 116 GMWGPLIVEPKN 127 (318)
T ss_dssp CCEEEEEEECSS
T ss_pred CCEEEEEEcCCC
Confidence 998888887643
No 68
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=55.30 E-value=1.9 Score=34.96 Aligned_cols=76 Identities=14% Similarity=0.241 Sum_probs=33.0
Q ss_pred CCeEEeCCEEEEeecC-C--CeeEEe--CcccCCC-CCCCCcc-ccCCc---eEEEeCCcccEEEEcCCCCCcCCCCeEE
Q 031614 48 NKTFEVGDSVMFNWST-T--HNVADV--SKSEYDD-CSKTSSV-VASHP---VQIQLNSTGSRYFICTVDDHCGRGQKLA 117 (156)
Q Consensus 48 ~~tF~vGD~L~F~y~~-~--H~V~~V--~~~~y~~-C~~~~~~-~~~G~---~~v~L~~~G~~YFiC~v~~hC~~GmKl~ 117 (156)
..+++.||+++|+.-+ . +....+ ....++. =...+.+ ...|. ..++.+++|.+.|.|-+..|-..||...
T Consensus 216 ~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~dG~~~dtv~l~pger~~v~~~~~~pG~~~~hch~~~H~~~GM~~~ 295 (306)
T 1sdd_A 216 DITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQNHHKISAITLVSATSTTANMTVSPEGRWTIASLIPRHFQAGMQAY 295 (306)
T ss_dssp CCCCCCC------BBCCCSSSCEECCBCSSTTCEETTEECSCCCEETTCCBC--------CCCCCBCCSTTTGGGTCBCC
T ss_pred ceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeeeCCEEcceEEECCCcEEEEEEEcCCCeEEEEEeCChHHHhcCCeEE
Confidence 4667889999998765 2 122212 2221211 0001111 33333 2577789999999999999999999999
Q ss_pred EEecCC
Q 031614 118 ITVKNS 123 (156)
Q Consensus 118 I~V~~~ 123 (156)
+.|.+.
T Consensus 296 ~~V~~~ 301 (306)
T 1sdd_A 296 IDIKNC 301 (306)
T ss_dssp C-----
T ss_pred EEEecC
Confidence 888754
No 69
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=52.49 E-value=35 Score=30.39 Aligned_cols=34 Identities=12% Similarity=0.287 Sum_probs=29.4
Q ss_pred EEEeCCcccEEEEcCCCCCcCCCCeEEEEecCCC
Q 031614 91 QIQLNSTGSRYFICTVDDHCGRGQKLAITVKNSG 124 (156)
Q Consensus 91 ~v~L~~~G~~YFiC~v~~hC~~GmKl~I~V~~~~ 124 (156)
.|+++++|++||=|-...+=..|+.-.+.|.++.
T Consensus 156 ~f~~~q~GT~WYHsH~~~q~~~GL~G~lIV~~p~ 189 (580)
T 3sqr_A 156 KFQVTQYGTTWYHSHFSLQYGDGLFGPLIINGPA 189 (580)
T ss_dssp EEECCCCEEEEEEECSTTGGGGTCEEEEEEECCC
T ss_pred EEECCCCcceEEeecccccccCcCEEEEEeeCcc
Confidence 6788899999999999888888999999998643
No 70
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=51.57 E-value=34 Score=29.65 Aligned_cols=34 Identities=9% Similarity=0.257 Sum_probs=28.6
Q ss_pred EEEe-CCcccEEEEcCCCCCcCCCCeEEEEecCCC
Q 031614 91 QIQL-NSTGSRYFICTVDDHCGRGQKLAITVKNSG 124 (156)
Q Consensus 91 ~v~L-~~~G~~YFiC~v~~hC~~GmKl~I~V~~~~ 124 (156)
.|++ +++|++||-|-...+=..|+.-.+.|.++.
T Consensus 97 ~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~ 131 (495)
T 3t6v_A 97 NFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPN 131 (495)
T ss_dssp EEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTT
T ss_pred EEEeCCCCceeeeeccchhHHhcCceEEEEEcCcc
Confidence 5777 679999999998888888999999997643
No 71
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=51.53 E-value=35 Score=29.69 Aligned_cols=34 Identities=12% Similarity=0.303 Sum_probs=28.4
Q ss_pred EEEe-CCcccEEEEcCCCCCcCCCCeEEEEecCCC
Q 031614 91 QIQL-NSTGSRYFICTVDDHCGRGQKLAITVKNSG 124 (156)
Q Consensus 91 ~v~L-~~~G~~YFiC~v~~hC~~GmKl~I~V~~~~ 124 (156)
.|++ +++|++||-|-...+=..|+.-.+.|.++.
T Consensus 96 ~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~ 130 (499)
T 3pxl_A 96 DFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPN 130 (499)
T ss_dssp EEECSSCCEEEEEEECSTTGGGGTCEEEEEEECTT
T ss_pred EEEcCCCCceeeeeccchhHHhccceeEEEEcCCc
Confidence 5677 679999999998888888999999997643
No 72
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=50.62 E-value=6.2 Score=31.63 Aligned_cols=75 Identities=8% Similarity=0.030 Sum_probs=47.0
Q ss_pred CCeEEeCCEEEEeecC-C-----CeeEE------e-CcccCC-CCCCCCcc-ccCCc---eEEEeCCcccEEEEcCCCCC
Q 031614 48 NKTFEVGDSVMFNWST-T-----HNVAD------V-SKSEYD-DCSKTSSV-VASHP---VQIQLNSTGSRYFICTVDDH 109 (156)
Q Consensus 48 ~~tF~vGD~L~F~y~~-~-----H~V~~------V-~~~~y~-~C~~~~~~-~~~G~---~~v~L~~~G~~YFiC~v~~h 109 (156)
..+++.||+++|...+ . |.+.. | ...... .=...+.+ ...|. ..++.++||.+.|.|-+..|
T Consensus 196 ~l~v~~Ge~vr~~l~N~g~~~~~H~fHlhG~~f~v~~~g~~~~~~~~~Dtv~v~pg~~~~v~~~~~~pG~~~~hCH~~~H 275 (288)
T 3gdc_A 196 PVKVKQHELVRIHLINVLEYDPINSFHIHGNFFHYYPTGTMLTPSEYTDTISQVQGQRGILELRFPYPGKFMFHAHKTEF 275 (288)
T ss_dssp CEEEETTCCEEEEEEECCCSSSEEEEEETTCCEEEEETTCCSSCSEEESEEEEETTCEEEEEECCCSCEEEEEECSSHHH
T ss_pred ccccCCCCEEEEEEEeCCCCCcceeEEEcCCEEEEEcCCCccCCCceeeEEEeCCCceEEEEEECCCCEEEEEEecChHH
Confidence 4688999999988854 1 44422 2 111100 00001111 23333 25677899999999999999
Q ss_pred cCCCCeEEEEecC
Q 031614 110 CGRGQKLAITVKN 122 (156)
Q Consensus 110 C~~GmKl~I~V~~ 122 (156)
=+.||.-.++|.+
T Consensus 276 ~~~GM~~~~~V~~ 288 (288)
T 3gdc_A 276 AELGWMGFFEVSA 288 (288)
T ss_dssp HTTTCEEEEEEEC
T ss_pred HhcCCCEEEEEeC
Confidence 9999999998864
No 73
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=45.16 E-value=50 Score=28.94 Aligned_cols=76 Identities=12% Similarity=0.153 Sum_probs=47.4
Q ss_pred CeEEeCCEEEEeecC-C----Cee-----EEeCcccCCC-CCCCCccccC-Cce---EEEeCCcccEEEEcCCCCCcCCC
Q 031614 49 KTFEVGDSVMFNWST-T----HNV-----ADVSKSEYDD-CSKTSSVVAS-HPV---QIQLNSTGSRYFICTVDDHCGRG 113 (156)
Q Consensus 49 ~tF~vGD~L~F~y~~-~----H~V-----~~V~~~~y~~-C~~~~~~~~~-G~~---~v~L~~~G~~YFiC~v~~hC~~G 113 (156)
.+++.||+|+.++.+ - +++ .+-.....|. -..++.-... |.+ .++++++|++||=|-...|=..|
T Consensus 69 i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~~tq~~I~P~G~~~~Y~f~~~q~GT~wYH~H~~~q~~~G 148 (559)
T 2q9o_A 69 IVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGANGVTECPIPPKGGQRTYRWRARQYGTSWYHSHFSAQYGNG 148 (559)
T ss_dssp EEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTTEEEEEEEECCSCEEEEEEECSTTGGGGT
T ss_pred EEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCCCccccCccCCCCCeEEEEEECCCCEEEEEEEcccchhcCC
Confidence 567899999999865 1 233 2210011111 0000000233 543 67888999999999998888899
Q ss_pred CeEEEEecCCC
Q 031614 114 QKLAITVKNSG 124 (156)
Q Consensus 114 mKl~I~V~~~~ 124 (156)
|--.+.|.++.
T Consensus 149 l~G~liV~~~~ 159 (559)
T 2q9o_A 149 VVGTIQINGPA 159 (559)
T ss_dssp CEEEEEEECCC
T ss_pred ceEEEEecCCC
Confidence 99999998643
No 74
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=42.46 E-value=14 Score=30.74 Aligned_cols=64 Identities=16% Similarity=0.178 Sum_probs=43.9
Q ss_pred CCeEEeCCEEEEeecC---CCeeEEeCcccCCCCCCCCcc-ccCCc---eEEEeCCcccEEEEcCCCCCcCCC---CeEE
Q 031614 48 NKTFEVGDSVMFNWST---THNVADVSKSEYDDCSKTSSV-VASHP---VQIQLNSTGSRYFICTVDDHCGRG---QKLA 117 (156)
Q Consensus 48 ~~tF~vGD~L~F~y~~---~H~V~~V~~~~y~~C~~~~~~-~~~G~---~~v~L~~~G~~YFiC~v~~hC~~G---mKl~ 117 (156)
...+.+|..++|.-++ -|+-..-+-. -.. .-.|. ..++.++||.||..|+. -|-.| |++.
T Consensus 152 ~l~lP~g~~V~~~lTS~DViHsf~IP~lg--------~k~DaiPGr~n~~~~~~~~~G~y~g~CsE--~CG~~Hs~M~~~ 221 (315)
T 1fft_B 152 EIAFPANTPVYFKVTSNSVMNSFFIPRLG--------SQIYAMAGMQTRLHLIANEPGTYDGISAS--YSGPGFSGMKFK 221 (315)
T ss_dssp BCCCCSSSEEEEEECBSSSCEEEEEGGGT--------EEEEECBTSCEEEEEECCSCBCCEEBCCS--CCSTTTTTCCEE
T ss_pred eEEEeCCCEEEEEEEeCCccceeeecccC--------cEEeecCCcceeeEEecCCCeEEEEeccc--cchhhHHhccce
Confidence 4678899999999987 2777642111 001 22233 36788999999999985 67554 9999
Q ss_pred EEec
Q 031614 118 ITVK 121 (156)
Q Consensus 118 I~V~ 121 (156)
|.|.
T Consensus 222 v~vv 225 (315)
T 1fft_B 222 AIAT 225 (315)
T ss_dssp CCBC
T ss_pred EEEe
Confidence 8887
No 75
>3iuw_A Activating signal cointegrator; NP_814290.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 1.58A {Enterococcus faecalis V583}
Probab=42.10 E-value=10 Score=25.81 Aligned_cols=14 Identities=29% Similarity=0.826 Sum_probs=11.4
Q ss_pred CeEEeCCEEEEe-ec
Q 031614 49 KTFEVGDSVMFN-WS 62 (156)
Q Consensus 49 ~tF~vGD~L~F~-y~ 62 (156)
+.|++||.|+|+ |.
T Consensus 36 r~~~vGD~l~l~E~~ 50 (83)
T 3iuw_A 36 RNFQVGDILILEEYM 50 (83)
T ss_dssp SCCCTTCEEEEEEEE
T ss_pred cCCCCCCEEEEEEcc
Confidence 569999999995 54
No 76
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=41.97 E-value=53 Score=28.43 Aligned_cols=34 Identities=12% Similarity=0.278 Sum_probs=28.4
Q ss_pred EEEe-CCcccEEEEcCCCCCcCCCCeEEEEecCCC
Q 031614 91 QIQL-NSTGSRYFICTVDDHCGRGQKLAITVKNSG 124 (156)
Q Consensus 91 ~v~L-~~~G~~YFiC~v~~hC~~GmKl~I~V~~~~ 124 (156)
.+++ +++|++||=|-...|=..||--.+.|.+..
T Consensus 117 ~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~ 151 (521)
T 1v10_A 117 DFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPN 151 (521)
T ss_dssp EEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTT
T ss_pred EEecCCCCccEEEEeccCCchhcCceEEEEEcCCc
Confidence 5664 579999999999888889999999997653
No 77
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=33.55 E-value=60 Score=27.92 Aligned_cols=34 Identities=6% Similarity=0.213 Sum_probs=27.8
Q ss_pred EEEe-CCcccEEEEcCCCCCcCCCCeEEEEecCCC
Q 031614 91 QIQL-NSTGSRYFICTVDDHCGRGQKLAITVKNSG 124 (156)
Q Consensus 91 ~v~L-~~~G~~YFiC~v~~hC~~GmKl~I~V~~~~ 124 (156)
.+++ +++|++||=|-...+=..||--.+.|.+..
T Consensus 96 ~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~ 130 (503)
T 1hfu_A 96 KFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDN 130 (503)
T ss_dssp EECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTT
T ss_pred EEEeCCCCccEEEEecchhhhhCcceeeEEEcCCC
Confidence 4553 479999999999888888999999998653
No 78
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=31.02 E-value=37 Score=28.38 Aligned_cols=34 Identities=9% Similarity=0.174 Sum_probs=28.5
Q ss_pred EEEeCCcccEEEEcCCCCCc-CCCCeEEEEecCCC
Q 031614 91 QIQLNSTGSRYFICTVDDHC-GRGQKLAITVKNSG 124 (156)
Q Consensus 91 ~v~L~~~G~~YFiC~v~~hC-~~GmKl~I~V~~~~ 124 (156)
.++.+++|.+++.|....|+ ..||...+.|...+
T Consensus 265 ~v~~~~~G~y~~~~~~~~~~~~~g~~a~l~v~~~~ 299 (442)
T 2zoo_A 265 EFKVEVPGTFILVDHSIFRAFNKGALAMLKVEGPD 299 (442)
T ss_dssp EEECCSCEEEEEEESSTHHHHTTSCEEEEEEESCC
T ss_pred EEEcCCCCeEEEEecccccccccCceEEEEecCCC
Confidence 57888999999999988887 78998888887554
No 79
>1yel_A AT1G16640; CESG, protein structure initiative, structural genomics, center for eukaryotic structural genomics, unknown function; NMR {Arabidopsis thaliana} SCOP: b.142.1.2
Probab=30.65 E-value=15 Score=25.01 Aligned_cols=16 Identities=19% Similarity=0.434 Sum_probs=14.3
Q ss_pred CCeEEeCCEEEEeecC
Q 031614 48 NKTFEVGDSVMFNWST 63 (156)
Q Consensus 48 ~~tF~vGD~L~F~y~~ 63 (156)
.+..+.||.|+|++..
T Consensus 75 ~~~L~~GD~lvF~~~~ 90 (104)
T 1yel_A 75 DNNLEDGKYLQFIYDR 90 (104)
T ss_dssp HHTCCTTCEEEEEECS
T ss_pred HcCCCCCCEEEEEEcC
Confidence 5678999999999987
No 80
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=30.60 E-value=42 Score=28.01 Aligned_cols=77 Identities=13% Similarity=0.113 Sum_probs=48.3
Q ss_pred CCeEEeCCEEEEeecC-----C-------CeeEEeCc-ccCCCCC--CCCcc-ccCCce---EEEeCCcccEEEEcCCCC
Q 031614 48 NKTFEVGDSVMFNWST-----T-------HNVADVSK-SEYDDCS--KTSSV-VASHPV---QIQLNSTGSRYFICTVDD 108 (156)
Q Consensus 48 ~~tF~vGD~L~F~y~~-----~-------H~V~~V~~-~~y~~C~--~~~~~-~~~G~~---~v~L~~~G~~YFiC~v~~ 108 (156)
..+++.|+++++...+ . |+...+.. ..+-.=- ..+.+ ...|.. .+..++||.++|-|-...
T Consensus 340 ~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~vv~~dG~~~~~p~~~~dtv~l~pg~r~~i~~~~~~pG~~~~hch~~~ 419 (447)
T 2dv6_A 340 PLYASVGETVRIFFGVGGPNFTSSFHVIGEIFDHVYSLGSVVSPPLIGVQTVSVPPGGATIVDFKIDRAGRYILVDHALS 419 (447)
T ss_dssp CEEECTTCEEEEEEEEEESSCCEEEEEETCCEEEECGGGCSSSCCEEEESEEEECTTEEEEEEEECCSCEEEEEEESSGG
T ss_pred ceEECCCCEEEEEEEeCCCCceEeEEEcCcEEEEEEcCCcccCCCcccccEEEECCCcEEEEEEECCCCEEEEEEecCcC
Confidence 3567779998887632 1 44444422 2221100 01112 333432 567789999999999999
Q ss_pred CcCCCCeEEEEecCCC
Q 031614 109 HCGRGQKLAITVKNSG 124 (156)
Q Consensus 109 hC~~GmKl~I~V~~~~ 124 (156)
|=..||...+.|...+
T Consensus 420 h~~~Gm~~~~~v~~~~ 435 (447)
T 2dv6_A 420 RLEHGLVGFLNVDGPK 435 (447)
T ss_dssp GGGGTCCEEEEECSCS
T ss_pred ccccCCEEEEEEeCCC
Confidence 9888999999997654
No 81
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=30.06 E-value=24 Score=28.37 Aligned_cols=30 Identities=23% Similarity=0.420 Sum_probs=26.5
Q ss_pred CCcccEEEEcCCCCCcCCCCeEEEEecCCC
Q 031614 95 NSTGSRYFICTVDDHCGRGQKLAITVKNSG 124 (156)
Q Consensus 95 ~~~G~~YFiC~v~~hC~~GmKl~I~V~~~~ 124 (156)
+.||.+.|-|-+..|=+.||...++|.+.+
T Consensus 260 dnPG~w~~HCHi~~H~~~GM~~~f~V~~~~ 289 (299)
T 3t9w_A 260 VGPGMWMYHCHVQNHSDMGMAGMFLVRNAD 289 (299)
T ss_dssp TCSEEEEEEECSHHHHHTTCEEEEEEECTT
T ss_pred CCCeeEEEEcCCHHHHhcCCeEEEEEECCC
Confidence 358999999999999999999999998754
No 82
>2qcp_X Cation efflux system protein CUSF; silver-binding, copper-binding, beta barrel, OB-fold, metall metal resistance, metal-binding; 1.00A {Escherichia coli str} PDB: 1zeq_X 3e6z_X
Probab=29.81 E-value=18 Score=23.86 Aligned_cols=16 Identities=31% Similarity=0.574 Sum_probs=14.0
Q ss_pred CCeEEeCCEEEEeecC
Q 031614 48 NKTFEVGDSVMFNWST 63 (156)
Q Consensus 48 ~~tF~vGD~L~F~y~~ 63 (156)
-..+++||.+.|.+..
T Consensus 51 l~~lk~Gd~V~F~~~~ 66 (80)
T 2qcp_X 51 MSEIKTGDKVAFNFVQ 66 (80)
T ss_dssp ECCCCTTCEEEEEEEE
T ss_pred hhcCCCCCEEEEEEEE
Confidence 3679999999999976
No 83
>1xne_A Hypothetical protein PF0469; GFT structural genomics, protein structure initiative, NESG, PFR14, alpha and beta protein; NMR {Pyrococcus furiosus} SCOP: b.122.1.6
Probab=29.49 E-value=14 Score=26.33 Aligned_cols=12 Identities=42% Similarity=0.866 Sum_probs=10.3
Q ss_pred CeEEeCCEEEEe
Q 031614 49 KTFEVGDSVMFN 60 (156)
Q Consensus 49 ~tF~vGD~L~F~ 60 (156)
+.+++||.|+|+
T Consensus 33 ~~i~vGD~I~f~ 44 (113)
T 1xne_A 33 KDIKRGDKIIFN 44 (113)
T ss_dssp TTCCTTCEEEET
T ss_pred hccCCCCEEEEc
Confidence 568999999994
No 84
>2vb2_X Copper protein, cation efflux system protein CUSF; cation PI, metal-binding, metal transport, copper tolerance, transport; 1.70A {Escherichia coli} PDB: 2vb3_X
Probab=29.25 E-value=19 Score=24.28 Aligned_cols=19 Identities=26% Similarity=0.428 Sum_probs=15.3
Q ss_pred ccCCCeEEeCCEEEEeecC
Q 031614 45 WISNKTFEVGDSVMFNWST 63 (156)
Q Consensus 45 Wa~~~tF~vGD~L~F~y~~ 63 (156)
.+.-..+++||.+.|.+..
T Consensus 56 ~~~l~~lk~Gd~V~F~~~~ 74 (88)
T 2vb2_X 56 QTKMSEIKTGDKVAFNFVQ 74 (88)
T ss_dssp TCEECCCCTTCEEEEEEEE
T ss_pred hhhhhcCCCCCEEEEEEEE
Confidence 3334779999999999976
No 85
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=28.99 E-value=29 Score=30.83 Aligned_cols=74 Identities=8% Similarity=0.021 Sum_probs=46.2
Q ss_pred CCeEEeCCEEEEeecC-C-----CeeEEeCcccCCCC--C--CCCcc-ccCCce---EEEeCCcccEEEEcCCCCCcCCC
Q 031614 48 NKTFEVGDSVMFNWST-T-----HNVADVSKSEYDDC--S--KTSSV-VASHPV---QIQLNSTGSRYFICTVDDHCGRG 113 (156)
Q Consensus 48 ~~tF~vGD~L~F~y~~-~-----H~V~~V~~~~y~~C--~--~~~~~-~~~G~~---~v~L~~~G~~YFiC~v~~hC~~G 113 (156)
..+++.||++++..-+ . |.+.. ....+.-= + ..+.+ ...|.. .+..++||.+.|-|-+..|-..|
T Consensus 240 ~l~v~~G~~vrlrliN~~~~~~~h~~hl-hG~~f~vi~~d~~~~d~v~l~pg~r~~v~~~~~~pG~w~~hch~~~h~~~G 318 (647)
T 1sdd_B 240 GLRMYEQEWVRLHLLNLGGSRDIHVVHF-HGQTLLENGTQQHQLGVWPLLPGSFKTLEMKASKPGWWLLDTEVGEIQRAG 318 (647)
T ss_dssp CCEEETTCEEEEEEEECCCTTCCEEEEE-TTCCEEECSSSCEEESSEEECTTEEEEEEEECCSSEEEEEECCCHHHHTTT
T ss_pred CeEEcCCCEEEEEEEeCCCCCcceeEEE-cCcEEEEecCCCcccceEEECCCeEEEEEEEeccceEeecccCcccccccc
Confidence 3567889999888743 1 33221 11111100 0 01111 334442 56778899999999999999999
Q ss_pred CeEEEEecC
Q 031614 114 QKLAITVKN 122 (156)
Q Consensus 114 mKl~I~V~~ 122 (156)
|...+.|.+
T Consensus 319 m~~~~~V~~ 327 (647)
T 1sdd_B 319 MQTPFLIVD 327 (647)
T ss_dssp CEEEEEEEC
T ss_pred cccceeeec
Confidence 999999964
No 86
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=28.92 E-value=41 Score=27.09 Aligned_cols=34 Identities=9% Similarity=-0.052 Sum_probs=27.8
Q ss_pred EEEeCCcccEEEEcCCCC-CcCCCCeEEEEecCCC
Q 031614 91 QIQLNSTGSRYFICTVDD-HCGRGQKLAITVKNSG 124 (156)
Q Consensus 91 ~v~L~~~G~~YFiC~v~~-hC~~GmKl~I~V~~~~ 124 (156)
.++.++||.++|.|.... |=..||.-.+.|....
T Consensus 292 ~v~~~~pG~y~~~~h~~~~h~~~Gm~~~~~V~~~~ 326 (340)
T 2bw4_A 292 FYTFRQPGVYAYVNHNLIEAFELGAAGHFKVTGEW 326 (340)
T ss_dssp EEECCSCEEEEEEESSHHHHHTTSCEEEEEEESCC
T ss_pred EEECCCCeeeEEEcCchHHHHhCCCEEEEEECCCC
Confidence 578889999999998863 5578999889998654
No 87
>2z0t_A Putative uncharacterized protein PH0355; alpha/beta protein, RNA binding protein, structural genomics, NPPSFA; 1.80A {Pyrococcus horikoshii} PDB: 1s04_A
Probab=28.66 E-value=18 Score=25.56 Aligned_cols=11 Identities=27% Similarity=0.764 Sum_probs=9.9
Q ss_pred CeEEeCCEEEE
Q 031614 49 KTFEVGDSVMF 59 (156)
Q Consensus 49 ~tF~vGD~L~F 59 (156)
+.+++||.|+|
T Consensus 32 ~~ikvGD~I~f 42 (109)
T 2z0t_A 32 RQIKPGDIIIF 42 (109)
T ss_dssp GGCCTTCEEEE
T ss_pred hcCCCCCEEEE
Confidence 57899999999
No 88
>2b1y_A Hypothetical protein ATU1913; NEW fold, structural genomics, PSI, PR structure initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: b.156.1.1
Probab=27.13 E-value=1.4 Score=31.47 Aligned_cols=77 Identities=14% Similarity=0.267 Sum_probs=48.0
Q ss_pred eEEeCCEEEEeecCCCeeEEeCcccCCCCCCCC------ccccCCceEEEeCCcccEEEEcCCCCCcCCCCeEEEEecCC
Q 031614 50 TFEVGDSVMFNWSTTHNVADVSKSEYDDCSKTS------SVVASHPVQIQLNSTGSRYFICTVDDHCGRGQKLAITVKNS 123 (156)
Q Consensus 50 tF~vGD~L~F~y~~~H~V~~V~~~~y~~C~~~~------~~~~~G~~~v~L~~~G~~YFiC~v~~hC~~GmKl~I~V~~~ 123 (156)
...-||+++.+-+..-+|..+|.+.|..=.-.. ..++.++..++...+|.-|.+=...||+. .-+-.|++.++
T Consensus 15 ~l~~Gd~V~V~cs~~~nVrLmd~~Nf~~~~~g~~~~~~GG~~~~~P~~itVP~sG~W~vvID~~g~~~-~~~~SI~vipa 93 (104)
T 2b1y_A 15 ELRAGTTLEISLSSVNNVRLMTGANFQRFTELLDFKYLGGVAKKSPIRIAVPETMHWHLIIDAEGHSG-LAESSVKMLPA 93 (104)
T ss_dssp CCCTTCCCCCCCSSSCCCCCCCHHHHHHHHHHTTCCCSCCCCCSSSCCCCCCSSSCCCCCCCCTTSSS-CCCCCCCCCCC
T ss_pred hccCCCEEEEEeCCceeEEEcCchhhhhhhccCceeEeccccccCCEEEECCCCceEEEEEecCCcCC-cceeeEEEecC
Confidence 567799998888777778777766664211111 11344455666667775555555566665 56778888876
Q ss_pred CCCC
Q 031614 124 GNDT 127 (156)
Q Consensus 124 ~~~~ 127 (156)
++|.
T Consensus 94 ~~~~ 97 (104)
T 2b1y_A 94 QPQA 97 (104)
T ss_dssp CCCC
T ss_pred CCCc
Confidence 5443
No 89
>2l8d_A Lamin-B receptor; DNA binding protein; NMR {Gallus gallus}
Probab=26.09 E-value=60 Score=21.08 Aligned_cols=44 Identities=23% Similarity=0.433 Sum_probs=25.9
Q ss_pred CCeEEeCCEEEEeecCCCeeEEeCcccCCCCCCCCcc----ccCCceEEEeC
Q 031614 48 NKTFEVGDSVMFNWSTTHNVADVSKSEYDDCSKTSSV----VASHPVQIQLN 95 (156)
Q Consensus 48 ~~tF~vGD~L~F~y~~~H~V~~V~~~~y~~C~~~~~~----~~~G~~~v~L~ 95 (156)
..+|.+||++.=+|+..+.-+++-=..++ ..+++ +.+| +.-+|.
T Consensus 7 ~~~~~vgd~VmaRW~Gd~~yYparI~Si~---s~~~~Y~V~fKdg-T~e~L~ 54 (66)
T 2l8d_A 7 NRKYADGEVVMGRWPGSVLYYEVQVTSYD---DASHLYTVKYKDG-TELALK 54 (66)
T ss_dssp SSSSCSSCEEEEECTTSSCEEEEEEEEEE---TTTTEEEEEETTS-CEEEEE
T ss_pred ceEeecCCEEEEEcCCCccceEEEEEEec---cCCceEEEEecCC-CEEeec
Confidence 47899999999999554544444222222 44454 6674 334444
No 90
>2hd9_A UPF0310 protein PH1033; pyrococcus horikoshii OT3, structural genomics, NPPSFA, NATI project on protein structural and functional analyses; HET: CIT; 1.35A {Pyrococcus horikoshii} SCOP: b.122.1.8 PDB: 1wmm_A* 2zbn_A
Probab=24.82 E-value=22 Score=25.94 Aligned_cols=43 Identities=12% Similarity=0.098 Sum_probs=30.4
Q ss_pred cCcccCCCccchhcccCCCeEEeCCEEEEeecCC------------CeeEEeCcccCCC
Q 031614 31 LHWIVPTSADYYTNWISNKTFEVGDSVMFNWSTT------------HNVADVSKSEYDD 77 (156)
Q Consensus 31 ~gW~~~~~~~~Y~~Wa~~~tF~vGD~L~F~y~~~------------H~V~~V~~~~y~~ 77 (156)
.||. +.| |++...-+..++||.+.|-.++. -.+.+|.++.|..
T Consensus 19 ~g~~-GVn---~~arn~lr~mk~GD~~~fYhs~~~~~~~~~~~~~ivGi~eV~~e~y~D 73 (145)
T 2hd9_A 19 HNVW-GVP---KKHKNTLSRVKPGDKLVIYVRQEKDKEGNLLEPKIVGIYEVTSEPYVD 73 (145)
T ss_dssp HCEE-EEC---GGGHHHHTTCCTTCEEEEEECCEECTTCCEECCEEEEEEEECSCCEEC
T ss_pred cCcc-ccC---HHHHHHHHhCCCCCEEEEEEccccccCCCCCCceEEEEEEEcCCcEeC
Confidence 5777 667 87776668999999998866531 4567775566653
No 91
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=24.66 E-value=32 Score=28.25 Aligned_cols=77 Identities=19% Similarity=0.206 Sum_probs=48.0
Q ss_pred CCeEEeCCEEEEeecC----CCeeEE------eCccc-CCCCC-CC---Ccc-ccCCce---EEEe---CCcccEEEEcC
Q 031614 48 NKTFEVGDSVMFNWST----THNVAD------VSKSE-YDDCS-KT---SSV-VASHPV---QIQL---NSTGSRYFICT 105 (156)
Q Consensus 48 ~~tF~vGD~L~F~y~~----~H~V~~------V~~~~-y~~C~-~~---~~~-~~~G~~---~v~L---~~~G~~YFiC~ 105 (156)
..+++.||++++...+ .|.+.. |...+ +..=. .. +.+ ...|.. .++. +.||.++|-|-
T Consensus 210 ~l~v~~Ge~vri~l~N~g~~~HpfHlHGh~f~v~~~G~~~~p~~~~~~~Dtv~v~PG~~~~v~~~~~~~~~pG~w~~HCH 289 (343)
T 3cg8_A 210 DFEATVGDRVEIVMITHGEYYHTFHMHGHRWADNRTGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCH 289 (343)
T ss_dssp CEEEETTCEEEEEEEEESSCCEEEEETTCCEESSSSSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEEC
T ss_pred cEEeCCCCEEEEEEEcCCccccccEecCcEEEEeccCcccCCCCcccceeeEEeCCCCEEEEEEEECCCCCCeeEEEeCC
Confidence 4678999999998854 265532 21111 11000 00 111 233432 3443 57999999999
Q ss_pred CCCCcCCCCeEEEEecCCC
Q 031614 106 VDDHCGRGQKLAITVKNSG 124 (156)
Q Consensus 106 v~~hC~~GmKl~I~V~~~~ 124 (156)
+..|=..||...+.|.+..
T Consensus 290 i~~H~~~GM~g~~~V~~~~ 308 (343)
T 3cg8_A 290 VQSHSDMGMVGLFLVKKPD 308 (343)
T ss_dssp SHHHHHTTCEEEEEEECTT
T ss_pred CHHHHhccCcEEEEEecCC
Confidence 9999999999999997654
No 92
>2nms_A CMRF35-like-molecule 1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, inhibitory receptor, myelo-monocytic cells; 2.60A {Homo sapiens}
Probab=23.92 E-value=16 Score=24.94 Aligned_cols=30 Identities=10% Similarity=0.334 Sum_probs=15.2
Q ss_pred CcccEEEEcCCCCC-cCCCCeEEEEecCCCCCC
Q 031614 96 STGSRYFICTVDDH-CGRGQKLAITVKNSGNDT 127 (156)
Q Consensus 96 ~~G~~YFiC~v~~h-C~~GmKl~I~V~~~~~~~ 127 (156)
..|.|| |.+... -..+.++.+.|.++++++
T Consensus 86 Dsg~Y~--C~~~~~~~~~~~~v~L~V~~~~~~~ 116 (124)
T 2nms_A 86 DADTYW--CGIEKTGNDLGVTVQVTIDPAPVTQ 116 (124)
T ss_dssp GCEEEE--EEEEETTEEEEEEEEEEEECCC---
T ss_pred HCEEEE--EEEEcCCCCccEEEEEEEeCCCcCC
Confidence 456655 554321 134567788887764333
No 93
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=23.60 E-value=12 Score=34.63 Aligned_cols=70 Identities=17% Similarity=0.250 Sum_probs=45.5
Q ss_pred CCeEEeCCEEEEeecC-C-----CeeE------Ee-CcccCCCCCCCCcc-ccCCc---eEEEeCCcccEEEEcCCCCCc
Q 031614 48 NKTFEVGDSVMFNWST-T-----HNVA------DV-SKSEYDDCSKTSSV-VASHP---VQIQLNSTGSRYFICTVDDHC 110 (156)
Q Consensus 48 ~~tF~vGD~L~F~y~~-~-----H~V~------~V-~~~~y~~C~~~~~~-~~~G~---~~v~L~~~G~~YFiC~v~~hC 110 (156)
..+++.||++++..-+ . |.+. +| ....+ ..+.+ ...|. ..+..++||.+.|.|-+..|-
T Consensus 369 ~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~dg~----~~Dtv~l~Pg~~~~v~~~ad~pG~w~~hcH~~~H~ 444 (770)
T 2r7e_B 369 GLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRKKEEY----KMALYNLYPGVFETVEMLPSKAGIWRVECLIGEHL 444 (770)
T ss_dssp CCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCSSSCC----EESEEECCTTCCCEEEECCSSCBCCCBCCCSHHHH
T ss_pred CeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEecCCc----eeeEEEECCCeEEEEEEEeCCCCceEEEecccccc
Confidence 4678999999998854 1 3332 22 21111 11112 22232 256677899999999999999
Q ss_pred CCCCeEEEEec
Q 031614 111 GRGQKLAITVK 121 (156)
Q Consensus 111 ~~GmKl~I~V~ 121 (156)
..||...+.|.
T Consensus 445 ~~GM~~~~~V~ 455 (770)
T 2r7e_B 445 HAGMSTLFLVY 455 (770)
T ss_dssp TTBCCCCCCBC
T ss_pred ccccccccccc
Confidence 99999888884
No 94
>4i1k_A B3 domain-containing transcription factor VRN1; B3 domain beta-barrel, DNA binding protein; 1.60A {Arabidopsis thaliana}
Probab=23.45 E-value=18 Score=26.43 Aligned_cols=17 Identities=24% Similarity=0.409 Sum_probs=14.8
Q ss_pred CCeEEeCCEEEEeecCC
Q 031614 48 NKTFEVGDSVMFNWSTT 64 (156)
Q Consensus 48 ~~tF~vGD~L~F~y~~~ 64 (156)
.+..++||.++|++...
T Consensus 114 dn~L~~GD~cvFeli~~ 130 (146)
T 4i1k_A 114 ENNLGEGDVCVFELLRT 130 (146)
T ss_dssp HTTCCTTCEEEEEECSS
T ss_pred HcCCCCCCEEEEEEecC
Confidence 47899999999999873
No 95
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=23.39 E-value=44 Score=31.80 Aligned_cols=72 Identities=11% Similarity=0.142 Sum_probs=50.4
Q ss_pred CCeEEeCCEEEEeecC-C-----CeeEEeCcccCCCCCCCCcc------ccCCce---EEEeCCcccEEEEcCCCCCcCC
Q 031614 48 NKTFEVGDSVMFNWST-T-----HNVADVSKSEYDDCSKTSSV------VASHPV---QIQLNSTGSRYFICTVDDHCGR 112 (156)
Q Consensus 48 ~~tF~vGD~L~F~y~~-~-----H~V~~V~~~~y~~C~~~~~~------~~~G~~---~v~L~~~G~~YFiC~v~~hC~~ 112 (156)
..+++.|++++|+.-+ . |++. +....+. .+|. ...|.. .++.+++|.++|.|....|=..
T Consensus 272 ~l~v~~Ge~vRlRliNag~~~~~~~~~-i~Gh~f~----v~p~~~dtv~I~pGer~dVlv~~~~pG~y~i~~h~~~h~~~ 346 (1065)
T 2j5w_A 272 GLSMCAEDRVKWYLFGMGNEVDVHAAF-FHGQALT----NKNYRIDTINLFPATLFDAYMVAQNPGEWMLSCQNLNHLKA 346 (1065)
T ss_dssp CCEEETTCEEEEEEEECSSTTCCEEEE-ETTCCEE----ETTEEESEEEECBTCEEEEEEECCSCEEEEEEECSHHHHHT
T ss_pred ceEECCCCEEEEEEEcCCcccceeEEE-EcCCEEE----ECCeeecEEEECCCcEEEEEEEeCCCeeEEEEecCcchhhC
Confidence 4689999999999965 2 3332 2333232 1121 344443 6788899999999999999999
Q ss_pred CCeEEEEecCCC
Q 031614 113 GQKLAITVKNSG 124 (156)
Q Consensus 113 GmKl~I~V~~~~ 124 (156)
||.-.+.|.+.+
T Consensus 347 Gm~~~~~V~~~~ 358 (1065)
T 2j5w_A 347 GLQAFFQVQECN 358 (1065)
T ss_dssp TCEEEEEEECSC
T ss_pred CCEEEEEEecCC
Confidence 999999998654
No 96
>2dig_A Lamin-B receptor; tudor domain, integral nuclear envelope inner membrane protein, nuclear protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=22.99 E-value=78 Score=20.64 Aligned_cols=44 Identities=20% Similarity=0.317 Sum_probs=26.2
Q ss_pred CCeEEeCCEEEEeecCCCeeEEeCcccCCCCCCCCcc----ccCCceEEEeC
Q 031614 48 NKTFEVGDSVMFNWSTTHNVADVSKSEYDDCSKTSSV----VASHPVQIQLN 95 (156)
Q Consensus 48 ~~tF~vGD~L~F~y~~~H~V~~V~~~~y~~C~~~~~~----~~~G~~~v~L~ 95 (156)
..+|.+||++.=+|...+.-+++-=..++ ..+++ +.+| +..+|.
T Consensus 10 ~~~f~vgd~VmaRW~Gd~~yYparItSit---s~~~~Y~VkfKdg-T~e~L~ 57 (68)
T 2dig_A 10 SRKFADGEVVRGRWPGSSLYYEVEILSHD---STSQLYTVKYKDG-TELELK 57 (68)
T ss_dssp CCSSCSSCEEEEECTTTCCEEEEEEEEEE---TTTTEEEEECTTS-CEEEEE
T ss_pred ceEeecCCEEEEEccCCccceEEEEEEec---cCCceEEEEecCC-CEEEec
Confidence 47899999999999964444443222222 44454 6664 344444
No 97
>2hzs_I RNA polymerase II mediator complex subunit 8; beta barrel, channel, helix, transcription; 2.70A {Saccharomyces cerevisiae}
Probab=22.81 E-value=1.1 Score=23.93 Aligned_cols=16 Identities=31% Similarity=0.650 Sum_probs=12.9
Q ss_pred CCeEEeCCEEEEeecC
Q 031614 48 NKTFEVGDSVMFNWST 63 (156)
Q Consensus 48 ~~tF~vGD~L~F~y~~ 63 (156)
.++|.+.|.|.|.|..
T Consensus 4 skpfnvddvlkftftg 19 (27)
T 2hzs_I 4 SKPFNVDDVLKFTFTG 19 (27)
T ss_dssp --CCCHHHHHHHHHHC
T ss_pred CCCcChhheEEEEecc
Confidence 4789999999999987
No 98
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=22.63 E-value=77 Score=25.54 Aligned_cols=34 Identities=21% Similarity=0.298 Sum_probs=28.2
Q ss_pred EEEeCCcccEEEEcCCCCCcC------CCCeEEEEecCCC
Q 031614 91 QIQLNSTGSRYFICTVDDHCG------RGQKLAITVKNSG 124 (156)
Q Consensus 91 ~v~L~~~G~~YFiC~v~~hC~------~GmKl~I~V~~~~ 124 (156)
.+..++||.+.|-|-+..|-. .||...|.+...+
T Consensus 239 ~~~a~~pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 239 ILNMDNPGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp EEECCSCSEEEEEESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred EEECCCCeeEEEEeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 567889999999999999997 4678888887654
No 99
>2l55_A SILB,silver efflux protein, MFP component of the components proton antiporter metal...; APO form, AG(I)-binding site; NMR {Cupriavidus metallidurans}
Probab=22.26 E-value=28 Score=23.07 Aligned_cols=20 Identities=20% Similarity=0.260 Sum_probs=15.9
Q ss_pred cccCCCeEEeCCEEEEeecC
Q 031614 44 NWISNKTFEVGDSVMFNWST 63 (156)
Q Consensus 44 ~Wa~~~tF~vGD~L~F~y~~ 63 (156)
+.+.-..+++||.+.|.+..
T Consensus 41 ~~~~l~~lk~Gd~V~F~~~~ 60 (82)
T 2l55_A 41 PAGLPQGLKAGDRVAFSFRL 60 (82)
T ss_dssp TTCCCSSCSTTCEEEEEEEE
T ss_pred ChhHhhcCCCCCEEEEEEEE
Confidence 33445789999999999976
No 100
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=22.20 E-value=71 Score=29.39 Aligned_cols=75 Identities=12% Similarity=0.137 Sum_probs=45.0
Q ss_pred CeEEeCCEEEEeecC--C-------CeeEEeCcccCCCCCCCCccccCCce---EEEeC----------CcccEEEEcCC
Q 031614 49 KTFEVGDSVMFNWST--T-------HNVADVSKSEYDDCSKTSSVVASHPV---QIQLN----------STGSRYFICTV 106 (156)
Q Consensus 49 ~tF~vGD~L~F~y~~--~-------H~V~~V~~~~y~~C~~~~~~~~~G~~---~v~L~----------~~G~~YFiC~v 106 (156)
.++++||+|+.++.+ . |.+.+-...+ |.=.........|.. .+++. .+|++||-|.+
T Consensus 201 Ir~~~GD~v~v~~~N~l~~~~siH~HG~~~~~~~~-dG~~~~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~Gt~wYHsh~ 279 (770)
T 2r7e_B 201 IRAEVEDNIMVTFRNQASRPYSFYSSLISYEEDQR-QGAEPRKNFVKPNETKTYFWKVQHHMAPTKDEFDCKAWAYSSDV 279 (770)
T ss_dssp CCCCSSSCEEEEEECCSSSCCCCCBTTCCCCCCSS-SCTTTTSSCCCSSCEEEEECCCCSSSSCCSSCCSEEEEEECCCS
T ss_pred EEEEcCCEEEEEEEECCCCCcceeecccccccccC-CCCcCccCccCCCCeEEEEEEecCccCCccCCCCCeeEEeeccC
Confidence 668899999999876 1 3333221111 110000000333443 34555 67999999988
Q ss_pred CC--CcCCCCeEEEEecCCC
Q 031614 107 DD--HCGRGQKLAITVKNSG 124 (156)
Q Consensus 107 ~~--hC~~GmKl~I~V~~~~ 124 (156)
.. |...||.-.+.|.+..
T Consensus 280 ~~~~q~~~GL~G~liV~~~~ 299 (770)
T 2r7e_B 280 DLEKDVHSGLIGPLLVCHTN 299 (770)
T ss_dssp SSSHHHHTSCCEEEEEECST
T ss_pred CcHHHHhCCceeeEEECCCc
Confidence 66 6789999888887654
No 101
>4he6_A Peptidase family U32; ultra-tight crystal packing, unknown function; 1.10A {Geobacillus thermoleovorans} PDB: 4he5_A
Probab=20.86 E-value=35 Score=22.39 Aligned_cols=17 Identities=29% Similarity=0.372 Sum_probs=13.8
Q ss_pred CCeEEeCCEEEEeecCC
Q 031614 48 NKTFEVGDSVMFNWSTT 64 (156)
Q Consensus 48 ~~tF~vGD~L~F~y~~~ 64 (156)
..+|.+||.|++--+..
T Consensus 27 rN~f~~GD~iEi~~P~g 43 (89)
T 4he6_A 27 RNHFRPGDEVEFFGPEI 43 (89)
T ss_dssp SSCBCTTCEEEEESTTS
T ss_pred cCCcCCCCEEEEEcCCC
Confidence 67899999999875554
No 102
>1ed7_A Chitinase A1, (CHBD-CHIA1); twisted beta-sandwich, hydrolase; NMR {Bacillus circulans} SCOP: b.72.2.1
Probab=20.63 E-value=27 Score=20.47 Aligned_cols=16 Identities=25% Similarity=0.706 Sum_probs=13.0
Q ss_pred cccCCCeEEeCCEEEE
Q 031614 44 NWISNKTFEVGDSVMF 59 (156)
Q Consensus 44 ~Wa~~~tF~vGD~L~F 59 (156)
.|..+....+||.+.+
T Consensus 1 ~W~~~~~Y~~Gd~Vty 16 (45)
T 1ed7_A 1 AWQVNTAYTAGQLVTY 16 (45)
T ss_dssp CCCSSEEECTTCCEEE
T ss_pred CccCCceEcCCCEEEE
Confidence 4888888899999865
Done!