BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031616
(156 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 228 bits (581), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 110/145 (75%), Positives = 130/145 (89%)
Query: 9 DVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNG 68
D+L E+QI +F+EAF + DKDGDGCIT EELA+ I+SLDQNPTEEEL++MI+EVD DGNG
Sbjct: 2 DILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNG 61
Query: 69 TIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEEL 128
TIEF EFL LMA K+K+ +A+EELKEAFKVFDKDQ+GYIS +ELRHVM+NLGEKLTDEE+
Sbjct: 62 TIEFDEFLSLMAKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEV 121
Query: 129 EQMILEADSDGDGQVNYEEFARMML 153
EQMI EAD DGDGQVNYEEF +MM+
Sbjct: 122 EQMIKEADLDGDGQVNYEEFVKMMM 146
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 48/78 (61%)
Query: 4 NIYAEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVD 63
++ A+ V D E +EAF + DKD +G I+ EL + +L + T+EE+ MI E D
Sbjct: 70 SLMAKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEAD 129
Query: 64 LDGNGTIEFLEFLKLMAT 81
LDG+G + + EF+K+M T
Sbjct: 130 LDGDGQVNYEEFVKMMMT 147
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 213 bits (541), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 101/145 (69%), Positives = 126/145 (86%)
Query: 9 DVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNG 68
D L +DQI+EF+EAFS+ DKDGDGCIT +EL + ++SL QNPTE EL++MINEVD DGNG
Sbjct: 3 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 62
Query: 69 TIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEEL 128
TI+F EFL LMA KMK+ +++EELKEAF+VFDKDQ+G+IS ELRHVM NLGEKLTDEE+
Sbjct: 63 TIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEV 122
Query: 129 EQMILEADSDGDGQVNYEEFARMML 153
++MI EAD DGDGQ+NYEEF ++M+
Sbjct: 123 DEMIREADVDGDGQINYEEFVKVMM 147
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 47/79 (59%)
Query: 4 NIYAEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVD 63
N+ A + D E +EAF + DKD +G I+ EL + +L + T+EE+ MI E D
Sbjct: 71 NLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD 130
Query: 64 LDGNGTIEFLEFLKLMATK 82
+DG+G I + EF+K+M K
Sbjct: 131 VDGDGQINYEEFVKVMMAK 149
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 213 bits (541), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 101/145 (69%), Positives = 126/145 (86%)
Query: 9 DVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNG 68
D L EDQI+EF+EAFS+ DKDGDGCIT +EL + ++SL QNPTE EL++MINEVD DGNG
Sbjct: 3 DQLTEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 62
Query: 69 TIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEEL 128
TI+F EFL LMA KMK+ +++EELKEAF+VFDKDQ+G+IS ELRHVM NLGEKLTDEE+
Sbjct: 63 TIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEV 122
Query: 129 EQMILEADSDGDGQVNYEEFARMML 153
++MI EAD DGDGQ+NY+EF ++M+
Sbjct: 123 DEMIREADVDGDGQINYDEFVKVMM 147
Score = 55.8 bits (133), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 47/79 (59%)
Query: 4 NIYAEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVD 63
N+ A + D E +EAF + DKD +G I+ EL + +L + T+EE+ MI E D
Sbjct: 71 NLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD 130
Query: 64 LDGNGTIEFLEFLKLMATK 82
+DG+G I + EF+K+M K
Sbjct: 131 VDGDGQINYDEFVKVMMAK 149
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 209 bits (531), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 101/144 (70%), Positives = 123/144 (85%)
Query: 9 DVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNG 68
D L E+QIAEF+EAFS+ DKDGDG IT +EL + ++SL QNPTE EL++MINEVD DGNG
Sbjct: 3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 62
Query: 69 TIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEEL 128
TI+F EFL +MA KMK+ +++EE++EAF+VFDKD +GYIS ELRHVM NLGEKLTDEE+
Sbjct: 63 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 122
Query: 129 EQMILEADSDGDGQVNYEEFARMM 152
+QMI EAD DGDGQVNYEEF +MM
Sbjct: 123 DQMIREADIDGDGQVNYEEFVQMM 146
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E +EAF + DKDG+G I+ EL + +L + T+EE+ MI E D+DG+G + + EF++
Sbjct: 85 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQMIREADIDGDGQVNYEEFVQ 144
Query: 78 LMATK 82
+M K
Sbjct: 145 MMTAK 149
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 208 bits (529), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 100/146 (68%), Positives = 123/146 (84%)
Query: 7 AEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDG 66
D L E+QIAEF+EAFS+ DKDGDG IT +EL + ++SL QNPTE EL++MINEVD DG
Sbjct: 302 TRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 361
Query: 67 NGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDE 126
NGTI+F EFL +MA KMK+ +++EE++EAF+VFDKD +GYIS ELRHVM NLGEKLTDE
Sbjct: 362 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 421
Query: 127 ELEQMILEADSDGDGQVNYEEFARMM 152
E+++MI EAD DGDGQVNYEEF +MM
Sbjct: 422 EVDEMIREADIDGDGQVNYEEFVQMM 447
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E +EAF + DKDG+G I+ EL + +L + T+EE+ MI E D+DG+G + + EF++
Sbjct: 386 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 445
Query: 78 LMATK 82
+M K
Sbjct: 446 MMTAK 450
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 207 bits (528), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 100/146 (68%), Positives = 123/146 (84%)
Query: 7 AEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDG 66
D L E+QIAEF+EAFS+ DKDGDG IT +EL + ++SL QNPTE EL++MINEVD DG
Sbjct: 301 TRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 360
Query: 67 NGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDE 126
NGTI+F EFL +MA KMK+ +++EE++EAF+VFDKD +GYIS ELRHVM NLGEKLTDE
Sbjct: 361 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 420
Query: 127 ELEQMILEADSDGDGQVNYEEFARMM 152
E+++MI EAD DGDGQVNYEEF +MM
Sbjct: 421 EVDEMIREADIDGDGQVNYEEFVQMM 446
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E +EAF + DKDG+G I+ EL + +L + T+EE+ MI E D+DG+G + + EF++
Sbjct: 385 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 444
Query: 78 LMATK 82
+M K
Sbjct: 445 MMTAK 449
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 207 bits (528), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 100/144 (69%), Positives = 123/144 (85%)
Query: 9 DVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNG 68
D L E+QIAEF+EAFS+ DKDGDG IT +EL + ++SL QNPTE EL++MINEVD DGNG
Sbjct: 3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 62
Query: 69 TIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEEL 128
TI+F EFL +MA KMK+ +++EE++EAF+VFDKD +GYIS ELRHVM NLGEKLTDEE+
Sbjct: 63 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 122
Query: 129 EQMILEADSDGDGQVNYEEFARMM 152
++MI EAD DGDGQVNYEEF +MM
Sbjct: 123 DEMIREADIDGDGQVNYEEFVQMM 146
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E +EAF + DKDG+G I+ EL + +L + T+EE+ MI E D+DG+G + + EF++
Sbjct: 85 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 144
Query: 78 LMATK 82
+M K
Sbjct: 145 MMTAK 149
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 207 bits (528), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 100/146 (68%), Positives = 123/146 (84%)
Query: 7 AEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDG 66
D L E+QIAEF+EAFS+ DKDGDG IT +EL + ++SL QNPTE EL++MINEVD DG
Sbjct: 301 TRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 360
Query: 67 NGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDE 126
NGTI+F EFL +MA KMK+ +++EE++EAF+VFDKD +GYIS ELRHVM NLGEKLTDE
Sbjct: 361 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 420
Query: 127 ELEQMILEADSDGDGQVNYEEFARMM 152
E+++MI EAD DGDGQVNYEEF +MM
Sbjct: 421 EVDEMIREADIDGDGQVNYEEFVQMM 446
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E +EAF + DKDG+G I+ EL + +L + T+EE+ MI E D+DG+G + + EF++
Sbjct: 385 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 444
Query: 78 LMATK 82
+M K
Sbjct: 445 MMTAK 449
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 207 bits (527), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 100/146 (68%), Positives = 124/146 (84%)
Query: 7 AEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDG 66
+ D L E+QIAEF+EAFS+ DKDGDG IT +EL + ++SL QNPTE EL++MINEVD DG
Sbjct: 267 SRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 326
Query: 67 NGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDE 126
NGTI+F EFL +MA KMK+ +++EE++EAF+VFDKD +GYIS ELRHVM NLGEKLTDE
Sbjct: 327 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 386
Query: 127 ELEQMILEADSDGDGQVNYEEFARMM 152
E+++MI EAD DGDGQVNYEEF +MM
Sbjct: 387 EVDEMIREADIDGDGQVNYEEFVQMM 412
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E +EAF + DKDG+G I+ EL + +L + T+EE+ MI E D+DG+G + + EF++
Sbjct: 351 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 410
Query: 78 LMATK 82
+M K
Sbjct: 411 MMTAK 415
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 207 bits (527), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 100/146 (68%), Positives = 123/146 (84%)
Query: 7 AEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDG 66
D L E+QIAEF+EAFS+ DKDGDG IT +EL + ++SL QNPTE EL++MINEVD DG
Sbjct: 264 TRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 323
Query: 67 NGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDE 126
NGTI+F EFL +MA KMK+ +++EE++EAF+VFDKD +GYIS ELRHVM NLGEKLTDE
Sbjct: 324 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 383
Query: 127 ELEQMILEADSDGDGQVNYEEFARMM 152
E+++MI EAD DGDGQVNYEEF +MM
Sbjct: 384 EVDEMIREADIDGDGQVNYEEFVQMM 409
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 207 bits (527), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 100/144 (69%), Positives = 123/144 (85%)
Query: 9 DVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNG 68
D L E+QIAEF+EAFS+ DKDGDG IT +EL + ++SL QNPTE EL++MINEVD DGNG
Sbjct: 3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 62
Query: 69 TIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEEL 128
TI+F EFL +MA KMK+ +++EE++EAF+VFDKD +GYIS ELRHVM NLGEKLTDEE+
Sbjct: 63 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 122
Query: 129 EQMILEADSDGDGQVNYEEFARMM 152
++MI EAD DGDGQVNYEEF +MM
Sbjct: 123 DEMIREADIDGDGQVNYEEFVQMM 146
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E +EAF + DKDG+G I+ EL + +L + T+EE+ MI E D+DG+G + + EF++
Sbjct: 85 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 144
Query: 78 LMATK 82
+M K
Sbjct: 145 MMTAK 149
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 207 bits (526), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 100/144 (69%), Positives = 123/144 (85%)
Query: 9 DVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNG 68
D L E+QIAEF+EAFS+ DKDGDG IT +EL + ++SL QNPTE EL++MINEVD DGNG
Sbjct: 4 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 63
Query: 69 TIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEEL 128
TI+F EFL +MA KMK+ +++EE++EAF+VFDKD +GYIS ELRHVM NLGEKLTDEE+
Sbjct: 64 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 123
Query: 129 EQMILEADSDGDGQVNYEEFARMM 152
++MI EAD DGDGQVNYEEF +MM
Sbjct: 124 DEMIREADIDGDGQVNYEEFVQMM 147
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E +EAF + DKDG+G I+ EL + +L + T+EE+ MI E D+DG+G + + EF++
Sbjct: 86 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 145
Query: 78 LMATK 82
+M K
Sbjct: 146 MMTAK 150
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 207 bits (526), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 100/144 (69%), Positives = 123/144 (85%)
Query: 9 DVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNG 68
D L E+QIAEF+EAFS+ DKDGDG IT +EL + ++SL QNPTE EL++MINEVD DGNG
Sbjct: 6 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 65
Query: 69 TIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEEL 128
TI+F EFL +MA KMK+ +++EE++EAF+VFDKD +GYIS ELRHVM NLGEKLTDEE+
Sbjct: 66 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 125
Query: 129 EQMILEADSDGDGQVNYEEFARMM 152
++MI EAD DGDGQVNYEEF +MM
Sbjct: 126 DEMIREADIDGDGQVNYEEFVQMM 149
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E +EAF + DKDG+G I+ EL + +L + T+EE+ MI E D+DG+G + + EF++
Sbjct: 88 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 147
Query: 78 LMATK 82
+M K
Sbjct: 148 MMTAK 152
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 207 bits (526), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 100/144 (69%), Positives = 123/144 (85%)
Query: 9 DVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNG 68
D L E+QIAEF+EAFS+ DKDGDG IT +EL + ++SL QNPTE EL++MINEVD DGNG
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 69 TIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEEL 128
TI+F EFL +MA KMK+ +++EE++EAF+VFDKD +GYIS ELRHVM NLGEKLTDEE+
Sbjct: 62 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 121
Query: 129 EQMILEADSDGDGQVNYEEFARMM 152
++MI EAD DGDGQVNYEEF +MM
Sbjct: 122 DEMIREADIDGDGQVNYEEFVQMM 145
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 207 bits (526), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 100/144 (69%), Positives = 123/144 (85%)
Query: 9 DVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNG 68
D L E+QIAEF+EAFS+ DKDGDG IT +EL + ++SL QNPTE EL++MINEVD DGNG
Sbjct: 8 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 67
Query: 69 TIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEEL 128
TI+F EFL +MA KMK+ +++EE++EAF+VFDKD +GYIS ELRHVM NLGEKLTDEE+
Sbjct: 68 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 127
Query: 129 EQMILEADSDGDGQVNYEEFARMM 152
++MI EAD DGDGQVNYEEF +MM
Sbjct: 128 DEMIREADIDGDGQVNYEEFVQMM 151
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E +EAF + DKDG+G I+ EL + +L + T+EE+ MI E D+DG+G + + EF++
Sbjct: 90 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 149
Query: 78 LMATK 82
+M K
Sbjct: 150 MMTAK 154
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 207 bits (526), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 100/144 (69%), Positives = 123/144 (85%)
Query: 9 DVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNG 68
D L E+QIAEF+EAFS+ DKDGDG IT +EL + ++SL QNPTE EL++MINEVD DGNG
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 69 TIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEEL 128
TI+F EFL +MA KMK+ +++EE++EAF+VFDKD +GYIS ELRHVM NLGEKLTDEE+
Sbjct: 62 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 121
Query: 129 EQMILEADSDGDGQVNYEEFARMM 152
++MI EAD DGDGQVNYEEF +MM
Sbjct: 122 DEMIREADIDGDGQVNYEEFVQMM 145
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E +EAF + DKDG+G I+ EL + +L + T+EE+ MI E D+DG+G + + EF++
Sbjct: 84 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 143
Query: 78 LMATK 82
+M K
Sbjct: 144 MMTAK 148
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 207 bits (526), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 100/146 (68%), Positives = 123/146 (84%)
Query: 7 AEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDG 66
D L E+QIAEF+EAFS+ DKDGDG IT +EL + ++SL QNPTE EL++MINEVD DG
Sbjct: 267 TRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 326
Query: 67 NGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDE 126
NGTI+F EFL +MA KMK+ +++EE++EAF+VFDKD +GYIS ELRHVM NLGEKLTDE
Sbjct: 327 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 386
Query: 127 ELEQMILEADSDGDGQVNYEEFARMM 152
E+++MI EAD DGDGQVNYEEF +MM
Sbjct: 387 EVDEMIREADIDGDGQVNYEEFVQMM 412
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E +EAF + DKDG+G I+ EL + +L + T+EE+ MI E D+DG+G + + EF++
Sbjct: 351 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 410
Query: 78 LMATK 82
+M K
Sbjct: 411 MMTAK 415
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 207 bits (526), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 100/144 (69%), Positives = 123/144 (85%)
Query: 9 DVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNG 68
D L E+QIAEF+EAFS+ DKDGDG IT +EL + ++SL QNPTE EL++MINEVD DGNG
Sbjct: 3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 62
Query: 69 TIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEEL 128
TI+F EFL +MA KMK+ +++EE++EAF+VFDKD +GYIS ELRHVM NLGEKLTDEE+
Sbjct: 63 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 122
Query: 129 EQMILEADSDGDGQVNYEEFARMM 152
++MI EAD DGDGQVNYEEF +MM
Sbjct: 123 DEMIREADIDGDGQVNYEEFVQMM 146
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E +EAF + DKDG+G I+ EL + +L + T+EE+ MI E D+DG+G + + EF++
Sbjct: 85 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 144
Query: 78 LMATK 82
+M K
Sbjct: 145 MMTAK 149
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 207 bits (526), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 100/144 (69%), Positives = 123/144 (85%)
Query: 9 DVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNG 68
D L E+QIAEF+EAFS+ DKDGDG IT +EL + ++SL QNPTE EL++MINEVD DGNG
Sbjct: 3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 62
Query: 69 TIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEEL 128
TI+F EFL +MA KMK+ +++EE++EAF+VFDKD +GYIS ELRHVM NLGEKLTDEE+
Sbjct: 63 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 122
Query: 129 EQMILEADSDGDGQVNYEEFARMM 152
++MI EAD DGDGQVNYEEF +MM
Sbjct: 123 DEMIREADIDGDGQVNYEEFVQMM 146
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E +EAF + DKDG+G I+ EL + +L + T+EE+ MI E D+DG+G + + EF++
Sbjct: 85 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 144
Query: 78 LMATKM 83
+M K+
Sbjct: 145 MMTAKL 150
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 206 bits (525), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 100/146 (68%), Positives = 122/146 (83%)
Query: 7 AEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDG 66
D L E+QIAEF+EAFS+ DKDGDG IT +EL + ++SL QNPTE EL++MINEVD DG
Sbjct: 301 TRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 360
Query: 67 NGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDE 126
NGTI+F EFL +MA KMK +++EE++EAF+VFDKD +GYIS ELRHVM NLGEKLTDE
Sbjct: 361 NGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 420
Query: 127 ELEQMILEADSDGDGQVNYEEFARMM 152
E+++MI EAD DGDGQVNYEEF +MM
Sbjct: 421 EVDEMIREADIDGDGQVNYEEFVQMM 446
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E +EAF + DKDG+G I+ EL + +L + T+EE+ MI E D+DG+G + + EF++
Sbjct: 385 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 444
Query: 78 LMATK 82
+M K
Sbjct: 445 MMTAK 449
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 206 bits (525), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 100/144 (69%), Positives = 123/144 (85%)
Query: 9 DVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNG 68
D L E+QIAEF+EAFS+ DKDGDG IT +EL + ++SL QNPTE EL++MINEVD DGNG
Sbjct: 1 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 60
Query: 69 TIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEEL 128
TI+F EFL +MA KMK+ +++EE++EAF+VFDKD +GYIS ELRHVM NLGEKLTDEE+
Sbjct: 61 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 120
Query: 129 EQMILEADSDGDGQVNYEEFARMM 152
++MI EAD DGDGQVNYEEF +MM
Sbjct: 121 DEMIREADIDGDGQVNYEEFVQMM 144
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 206 bits (524), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 99/142 (69%), Positives = 122/142 (85%)
Query: 11 LPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTI 70
L E+QIAEF+EAFS+ DKDGDG IT +EL + ++SL QNPTE EL++MINEVD DGNGTI
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
Query: 71 EFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQ 130
+F EFL +MA KMK+ +++EE++EAF+VFDKD +GYIS ELRHVM NLGEKLTDEE+++
Sbjct: 62 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 121
Query: 131 MILEADSDGDGQVNYEEFARMM 152
MI EAD DGDGQVNYEEF +MM
Sbjct: 122 MIREADIDGDGQVNYEEFVQMM 143
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E +EAF + DKDG+G I+ EL + +L + T+EE+ MI E D+DG+G + + EF++
Sbjct: 82 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 141
Query: 78 LMATK 82
+M K
Sbjct: 142 MMTAK 146
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 206 bits (523), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 99/142 (69%), Positives = 122/142 (85%)
Query: 11 LPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTI 70
L E+QIAEF+EAFS+ DKDGDG IT +EL + ++SL QNPTE EL++MINEVD DGNGTI
Sbjct: 1 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 71 EFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQ 130
+F EFL +MA KMK+ +++EE++EAF+VFDKD +GYIS ELRHVM NLGEKLTDEE+++
Sbjct: 61 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 120
Query: 131 MILEADSDGDGQVNYEEFARMM 152
MI EAD DGDGQVNYEEF +MM
Sbjct: 121 MIREADIDGDGQVNYEEFVQMM 142
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 206 bits (523), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 99/146 (67%), Positives = 123/146 (84%)
Query: 7 AEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDG 66
D L E+QIAEF+EAFS+ DKDGDG IT +EL + ++SL QNPTE EL++MINEVD DG
Sbjct: 300 TRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 359
Query: 67 NGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDE 126
+GTI+F EFL +MA KMK+ +++EE++EAF+VFDKD +GYIS ELRHVM NLGEKLTDE
Sbjct: 360 DGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 419
Query: 127 ELEQMILEADSDGDGQVNYEEFARMM 152
E+++MI EAD DGDGQVNYEEF +MM
Sbjct: 420 EVDEMIREADIDGDGQVNYEEFVQMM 445
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E +EAF + DKDG+G I+ EL + +L + T+EE+ MI E D+DG+G + + EF++
Sbjct: 384 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 443
Query: 78 LMATK 82
+M K
Sbjct: 444 MMTAK 448
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 206 bits (523), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 99/142 (69%), Positives = 122/142 (85%)
Query: 11 LPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTI 70
L E+QIAEF+EAFS+ DKDGDG IT +EL + ++SL QNPTE EL++MINEVD DGNGTI
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
Query: 71 EFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQ 130
+F EFL +MA KMK+ +++EE++EAF+VFDKD +GYIS ELRHVM NLGEKLTDEE+++
Sbjct: 62 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 121
Query: 131 MILEADSDGDGQVNYEEFARMM 152
MI EAD DGDGQVNYEEF +MM
Sbjct: 122 MIREADIDGDGQVNYEEFVQMM 143
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 205 bits (522), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 99/146 (67%), Positives = 123/146 (84%)
Query: 7 AEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDG 66
D L E+QIAEF+EAFS+ DKDGDG IT +EL + ++SL QNPTE EL++MINEVD DG
Sbjct: 292 TRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 351
Query: 67 NGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDE 126
+GTI+F EFL +MA KMK+ +++EE++EAF+VFDKD +GYIS ELRHVM NLGEKLTDE
Sbjct: 352 DGTIDFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 411
Query: 127 ELEQMILEADSDGDGQVNYEEFARMM 152
E+++MI EAD DGDGQVNYEEF +MM
Sbjct: 412 EVDEMIREADIDGDGQVNYEEFVQMM 437
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E +EAF + DKDG+G I+ EL + +L + T+EE+ MI E D+DG+G + + EF++
Sbjct: 376 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 435
Query: 78 LMATK 82
+M K
Sbjct: 436 MMTAK 440
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 205 bits (522), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 100/145 (68%), Positives = 124/145 (85%)
Query: 9 DVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNG 68
D L ++QIAEF+EAFS+ DKDGDG IT +EL + ++SL QNPTE EL++MINEVD DGNG
Sbjct: 2 DQLTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 69 TIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEEL 128
TI+F EFL LMA KMK+ +++EELKEAF+VFDKD +G+IS ELRHVM NLGEKLTDEE+
Sbjct: 62 TIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 121
Query: 129 EQMILEADSDGDGQVNYEEFARMML 153
++MI EAD DGDGQVNYEEF ++M+
Sbjct: 122 DEMIREADVDGDGQVNYEEFVQVMM 146
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%)
Query: 4 NIYAEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVD 63
N+ A + D E +EAF + DKDG+G I+ EL + +L + T+EE+ MI E D
Sbjct: 70 NLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD 129
Query: 64 LDGNGTIEFLEFLKLMATK 82
+DG+G + + EF+++M K
Sbjct: 130 VDGDGQVNYEEFVQVMMAK 148
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 205 bits (521), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 99/144 (68%), Positives = 123/144 (85%)
Query: 9 DVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNG 68
D L E+QIAEF+EAFS+ DKDGDG IT +EL + ++SL QNPTE EL++MINEVD DGNG
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 69 TIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEEL 128
TI+F EFL +MA KMK+ +++EE++EAF+VFDKD +GYIS ELRHVM NLGEKLTDEE+
Sbjct: 62 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 121
Query: 129 EQMILEADSDGDGQVNYEEFARMM 152
++MI EA+ DGDGQVNYEEF +MM
Sbjct: 122 DEMIREANIDGDGQVNYEEFVQMM 145
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 43/65 (66%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E +EAF + DKDG+G I+ EL + +L + T+EE+ MI E ++DG+G + + EF++
Sbjct: 84 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYEEFVQ 143
Query: 78 LMATK 82
+M K
Sbjct: 144 MMTAK 148
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 205 bits (521), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 99/144 (68%), Positives = 123/144 (85%)
Query: 9 DVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNG 68
D L E+QIAEF+EAFS+ DKDGDG IT +EL + ++SL QNPTE EL++MINEVD DG+G
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDG 61
Query: 69 TIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEEL 128
TI+F EFL +MA KMK+ +++EE++EAF+VFDKD +GYIS ELRHVM NLGEKLTDEE+
Sbjct: 62 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 121
Query: 129 EQMILEADSDGDGQVNYEEFARMM 152
++MI EAD DGDGQVNYEEF +MM
Sbjct: 122 DEMIREADIDGDGQVNYEEFVQMM 145
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E +EAF + DKDG+G I+ EL + +L + T+EE+ MI E D+DG+G + + EF++
Sbjct: 84 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 143
Query: 78 LMATK 82
+M K
Sbjct: 144 MMTAK 148
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 205 bits (521), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 99/146 (67%), Positives = 122/146 (83%)
Query: 7 AEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDG 66
D L E+QIAEF+EAFS+ DKDGDG IT +EL + ++SL QNPTE EL++MINEVD DG
Sbjct: 301 TRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 360
Query: 67 NGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDE 126
NGTI+F EFL +MA MK+ +++EE++EAF+VFDKD +GYIS ELRHVM NLGEKLTDE
Sbjct: 361 NGTIDFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 420
Query: 127 ELEQMILEADSDGDGQVNYEEFARMM 152
E+++MI EAD DGDGQVNYEEF +MM
Sbjct: 421 EVDEMIREADIDGDGQVNYEEFVQMM 446
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E +EAF + DKDG+G I+ EL + +L + T+EE+ MI E D+DG+G + + EF++
Sbjct: 385 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 444
Query: 78 LMATK 82
+M K
Sbjct: 445 MMTAK 449
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 204 bits (520), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 99/144 (68%), Positives = 122/144 (84%)
Query: 9 DVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNG 68
D L E+QIAEF+EAFS+ DKDGDG IT +EL + ++SL QNPTE EL++MINEVD DGNG
Sbjct: 3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 62
Query: 69 TIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEEL 128
TI+F EFL +MA KMK+ +++EE++EAF+VFDKD +GYIS ELRHVM NLGE LTDEE+
Sbjct: 63 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEV 122
Query: 129 EQMILEADSDGDGQVNYEEFARMM 152
++MI EAD DGDGQVNYEEF +MM
Sbjct: 123 DEMIREADIDGDGQVNYEEFVQMM 146
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E +EAF + DKDG+G I+ EL + +L + T+EE+ MI E D+DG+G + + EF++
Sbjct: 85 EIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEEFVQ 144
Query: 78 LMATK 82
+M K
Sbjct: 145 MMTAK 149
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 204 bits (520), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 99/144 (68%), Positives = 122/144 (84%)
Query: 9 DVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNG 68
D L E+QIAEF+EAFS+ DKDGDG IT +EL + ++SL QNPTE EL++MINEVD DGNG
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 69 TIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEEL 128
TI+F EFL +MA KMK+ +++EE++EAF+VFDKD +GYIS ELRHVM NLGE LTDEE+
Sbjct: 62 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEV 121
Query: 129 EQMILEADSDGDGQVNYEEFARMM 152
++MI EAD DGDGQVNYEEF +MM
Sbjct: 122 DEMIREADIDGDGQVNYEEFVQMM 145
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E +EAF + DKDG+G I+ EL + +L + T+EE+ MI E D+DG+G + + EF++
Sbjct: 84 EIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEEFVQ 143
Query: 78 LMATK 82
+M K
Sbjct: 144 MMTAK 148
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 204 bits (520), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 99/144 (68%), Positives = 122/144 (84%)
Query: 9 DVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNG 68
D L E+QIAEF+EAFS+ DKDGDG IT +EL + ++SL QNPTE EL++MINEVD DGNG
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 69 TIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEEL 128
TI+F EFL +MA KMK+ +++EE++EAF+VFDKD +G+IS ELRHVM NLGEKLTDEE+
Sbjct: 62 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 121
Query: 129 EQMILEADSDGDGQVNYEEFARMM 152
++MI EAD DGDGQVNYEEF MM
Sbjct: 122 DEMIREADIDGDGQVNYEEFVTMM 145
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E +EAF + DKDG+G I+ EL + +L + T+EE+ MI E D+DG+G + + EF+
Sbjct: 84 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVT 143
Query: 78 LMATK 82
+M K
Sbjct: 144 MMTAK 148
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 204 bits (520), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 98/140 (70%), Positives = 121/140 (86%)
Query: 13 EDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEF 72
E+QIAEF+EAFS+ DKDGDG IT +EL + ++SL QNPTE EL++MINEVD DGNGTI+F
Sbjct: 4 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 63
Query: 73 LEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMI 132
EFL +MA KMK+ +++EE++EAF+VFDKD +GYIS ELRHVM NLGEKLTDEE+++MI
Sbjct: 64 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 123
Query: 133 LEADSDGDGQVNYEEFARMM 152
EAD DGDGQVNYEEF +MM
Sbjct: 124 READIDGDGQVNYEEFVQMM 143
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E +EAF + DKDG+G I+ EL + +L + T+EE+ MI E D+DG+G + + EF++
Sbjct: 82 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 141
Query: 78 LMATK 82
+M K
Sbjct: 142 MMTAK 146
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 204 bits (520), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 99/146 (67%), Positives = 122/146 (83%)
Query: 7 AEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDG 66
D L E+QIAEF+EAFS+ DKDGDG IT +EL + ++SL QNPTE EL++MINEVD DG
Sbjct: 301 TRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 360
Query: 67 NGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDE 126
+GTI+F EFL +MA KMK +++EE++EAF+VFDKD +GYIS ELRHVM NLGEKLTDE
Sbjct: 361 DGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 420
Query: 127 ELEQMILEADSDGDGQVNYEEFARMM 152
E+++MI EAD DGDGQVNYEEF +MM
Sbjct: 421 EVDEMIREADIDGDGQVNYEEFVQMM 446
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E +EAF + DKDG+G I+ EL + +L + T+EE+ MI E D+DG+G + + EF++
Sbjct: 385 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 444
Query: 78 LMATK 82
+M K
Sbjct: 445 MMTAK 449
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 204 bits (520), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 99/144 (68%), Positives = 122/144 (84%)
Query: 9 DVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNG 68
D L E+QIAEF+EAFS+ DKDGDG IT +EL + ++SL QNPTE EL++MINEVD DGNG
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 69 TIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEEL 128
TI+F EFL +MA KMK+ +++EE++EAF+VFDKD +G+IS ELRHVM NLGEKLTDEE+
Sbjct: 62 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 121
Query: 129 EQMILEADSDGDGQVNYEEFARMM 152
++MI EAD DGDGQVNYEEF MM
Sbjct: 122 DEMIREADIDGDGQVNYEEFVTMM 145
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E +EAF + DKDG+G I+ EL + +L + T+EE+ MI E D+DG+G + + EF+
Sbjct: 84 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVT 143
Query: 78 LMATK 82
+M +K
Sbjct: 144 MMTSK 148
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 204 bits (520), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 99/144 (68%), Positives = 122/144 (84%)
Query: 9 DVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNG 68
D L E+QIAEF+EAFS+ DKDGDG IT +EL + ++SL QNPTE EL++MINEVD DGNG
Sbjct: 3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 62
Query: 69 TIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEEL 128
TI+F EFL +MA KMK+ +++EE++EAF+VFDKD +G+IS ELRHVM NLGEKLTDEE+
Sbjct: 63 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 122
Query: 129 EQMILEADSDGDGQVNYEEFARMM 152
++MI EAD DGDGQVNYEEF MM
Sbjct: 123 DEMIREADIDGDGQVNYEEFVTMM 146
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E +EAF + DKDG+G I+ EL + +L + T+EE+ MI E D+DG+G + + EF+
Sbjct: 85 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVT 144
Query: 78 LMATK 82
+M +K
Sbjct: 145 MMTSK 149
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 204 bits (520), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 99/144 (68%), Positives = 122/144 (84%)
Query: 9 DVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNG 68
D L E+QIAEF+EAFS+ DKDGDG IT +EL + ++SL QNPTE EL++MINEVD DGNG
Sbjct: 3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 62
Query: 69 TIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEEL 128
TI+F EFL +MA KMK+ +++EE++EAF+VFDKD +G+IS ELRHVM NLGEKLTDEE+
Sbjct: 63 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 122
Query: 129 EQMILEADSDGDGQVNYEEFARMM 152
++MI EAD DGDGQVNYEEF MM
Sbjct: 123 DEMIREADIDGDGQVNYEEFVTMM 146
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E +EAF + DKDG+G I+ EL + +L + T+EE+ MI E D+DG+G + + EF+
Sbjct: 85 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVT 144
Query: 78 LMATK 82
+M TK
Sbjct: 145 MMTTK 149
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 204 bits (519), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 99/143 (69%), Positives = 123/143 (86%)
Query: 11 LPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTI 70
L ++QIAEF+EAFS+ DKDGDG IT +EL + ++SL QNPTE EL++MINEVD DGNGTI
Sbjct: 1 LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 71 EFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQ 130
+F EFL LMA KMK+ +++EELKEAF+VFDKD +G+IS ELRHVM NLGEKLTDEE+++
Sbjct: 61 DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 120
Query: 131 MILEADSDGDGQVNYEEFARMML 153
MI EAD DGDGQVNYEEF ++M+
Sbjct: 121 MIREADVDGDGQVNYEEFVQVMM 143
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%)
Query: 4 NIYAEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVD 63
N+ A + D E +EAF + DKDG+G I+ EL + +L + T+EE+ MI E D
Sbjct: 67 NLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD 126
Query: 64 LDGNGTIEFLEFLKLMATK 82
+DG+G + + EF+++M K
Sbjct: 127 VDGDGQVNYEEFVQVMMAK 145
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 204 bits (519), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 99/144 (68%), Positives = 122/144 (84%)
Query: 9 DVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNG 68
D L E+QIAEF+EAFS+ DKDGDG IT +EL + ++SL QNPTE EL++MINEVD DG+G
Sbjct: 302 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDG 361
Query: 69 TIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEEL 128
TI+F EFL +MA KMK +++EE++EAF+VFDKD +GYIS ELRHVM NLGEKLTDEE+
Sbjct: 362 TIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 421
Query: 129 EQMILEADSDGDGQVNYEEFARMM 152
++MI EAD DGDGQVNYEEF +MM
Sbjct: 422 DEMIREADIDGDGQVNYEEFVQMM 445
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E +EAF + DKDG+G I+ EL + +L + T+EE+ MI E D+DG+G + + EF++
Sbjct: 384 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 443
Query: 78 LMATK 82
+M K
Sbjct: 444 MMTAK 448
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 204 bits (519), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 99/145 (68%), Positives = 124/145 (85%)
Query: 9 DVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNG 68
D L ++QIAEF+EAFS+ DKDGDG IT +EL + ++SL QNPTE EL++MINEVD DGNG
Sbjct: 2 DQLTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 69 TIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEEL 128
TI+F EFL LMA KMK+ +++E+LKEAF+VFDKD +G+IS ELRHVM NLGEKLTDEE+
Sbjct: 62 TIDFPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 121
Query: 129 EQMILEADSDGDGQVNYEEFARMML 153
++MI EAD DGDGQVNYEEF ++M+
Sbjct: 122 DEMIREADVDGDGQVNYEEFVQVMM 146
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 48/79 (60%)
Query: 4 NIYAEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVD 63
N+ A + D + +EAF + DKDG+G I+ EL + +L + T+EE+ MI E D
Sbjct: 70 NLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD 129
Query: 64 LDGNGTIEFLEFLKLMATK 82
+DG+G + + EF+++M K
Sbjct: 130 VDGDGQVNYEEFVQVMMAK 148
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 204 bits (519), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 99/144 (68%), Positives = 122/144 (84%)
Query: 9 DVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNG 68
D L E+QIAEF+EAFS+ DKDGDG IT +EL + ++SL QNPTE EL++MINEVD DG+G
Sbjct: 302 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDG 361
Query: 69 TIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEEL 128
TI+F EFL +MA KMK +++EE++EAF+VFDKD +GYIS ELRHVM NLGEKLTDEE+
Sbjct: 362 TIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 421
Query: 129 EQMILEADSDGDGQVNYEEFARMM 152
++MI EAD DGDGQVNYEEF +MM
Sbjct: 422 DEMIREADIDGDGQVNYEEFVQMM 445
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E +EAF + DKDG+G I+ EL + +L + T+EE+ MI E D+DG+G + + EF++
Sbjct: 384 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 443
Query: 78 LMATK 82
+M K
Sbjct: 444 MMTAK 448
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 204 bits (519), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 98/140 (70%), Positives = 121/140 (86%)
Query: 13 EDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEF 72
E+QIAEF+EAFS+ DKDGDG IT +EL + ++SL QNPTE EL++MINEVD DGNGTI+F
Sbjct: 2 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 61
Query: 73 LEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMI 132
EFL +MA KMK+ +++EE++EAF+VFDKD +GYIS ELRHVM NLGEKLTDEE+++MI
Sbjct: 62 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 121
Query: 133 LEADSDGDGQVNYEEFARMM 152
EAD DGDGQVNYEEF +MM
Sbjct: 122 READIDGDGQVNYEEFVQMM 141
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E +EAF + DKDG+G I+ EL + +L + T+EE+ MI E D+DG+G + + EF++
Sbjct: 80 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 139
Query: 78 LMATK 82
+M K
Sbjct: 140 MMTAK 144
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 203 bits (517), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 98/144 (68%), Positives = 122/144 (84%)
Query: 9 DVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNG 68
D L E+QIAEF+EAFS+ DKDGDG IT +EL + ++SL QNPTE EL++MINEVD DGNG
Sbjct: 3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 62
Query: 69 TIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEEL 128
TI+F EFL +MA KMK+ +++EE++EAF+VFDKD +G+IS ELRHVM NLGEKLTDEE+
Sbjct: 63 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 122
Query: 129 EQMILEADSDGDGQVNYEEFARMM 152
++MI E+D DGDGQVNYEEF MM
Sbjct: 123 DEMIRESDIDGDGQVNYEEFVTMM 146
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E +EAF + DKDG+G I+ EL + +L + T+EE+ MI E D+DG+G + + EF+
Sbjct: 85 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRESDIDGDGQVNYEEFVT 144
Query: 78 LMATK 82
+M +K
Sbjct: 145 MMTSK 149
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 201 bits (511), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 98/143 (68%), Positives = 120/143 (83%)
Query: 11 LPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTI 70
L E+QIAEF+EAF++ DKDGDG IT +EL + ++SL QNPTE EL++MINEVD DGNGTI
Sbjct: 4 LTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 71 EFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQ 130
+F EFL LMA KMKE +++EEL EAFKVFD+D +G IS ELRHVM NLGEKLTD+E+++
Sbjct: 64 DFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDE 123
Query: 131 MILEADSDGDGQVNYEEFARMML 153
MI EAD DGDG +NYEEF RMM+
Sbjct: 124 MIREADIDGDGHINYEEFVRMMV 146
Score = 56.2 bits (134), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 49/79 (62%)
Query: 4 NIYAEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVD 63
++ A + +D E EAF + D+DG+G I+ EL + +L + T++E+ MI E D
Sbjct: 70 SLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREAD 129
Query: 64 LDGNGTIEFLEFLKLMATK 82
+DG+G I + EF+++M +K
Sbjct: 130 IDGDGHINYEEFVRMMVSK 148
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 201 bits (511), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 98/143 (68%), Positives = 120/143 (83%)
Query: 11 LPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTI 70
L E+QIAEF+EAF++ DKDGDG IT +EL + ++SL QNPTE EL++MINEVD DGNGTI
Sbjct: 4 LTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 71 EFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQ 130
+F EFL LMA KMKE +++EEL EAFKVFD+D +G IS ELRHVM NLGEKLTD+E+++
Sbjct: 64 DFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDE 123
Query: 131 MILEADSDGDGQVNYEEFARMML 153
MI EAD DGDG +NYEEF RMM+
Sbjct: 124 MIREADIDGDGHINYEEFVRMMV 146
Score = 56.2 bits (134), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 49/79 (62%)
Query: 4 NIYAEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVD 63
++ A + +D E EAF + D+DG+G I+ EL + +L + T++E+ MI E D
Sbjct: 70 SLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREAD 129
Query: 64 LDGNGTIEFLEFLKLMATK 82
+DG+G I + EF+++M +K
Sbjct: 130 IDGDGHINYEEFVRMMVSK 148
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 200 bits (509), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 100/144 (69%), Positives = 121/144 (84%), Gaps = 2/144 (1%)
Query: 9 DVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNG 68
D L E+QIAEF+EAFS+ DKDGDG IT +EL + ++SL QNPTE EL++MINEVD DGNG
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 69 TIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEEL 128
TI+F EFL +MA KMK++E EE++EAF+VFDKD +G+IS ELRHVM NLGEKLTDEE+
Sbjct: 62 TIDFPEFLTMMARKMKDSE--EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 119
Query: 129 EQMILEADSDGDGQVNYEEFARMM 152
++MI EAD DGDGQVNYEEF MM
Sbjct: 120 DEMIREADIDGDGQVNYEEFVTMM 143
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E +EAF + DKDG+G I+ EL + +L + T+EE+ MI E D+DG+G + + EF+
Sbjct: 82 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVT 141
Query: 78 LMATK 82
+M +K
Sbjct: 142 MMTSK 146
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 198 bits (504), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 90/145 (62%), Positives = 121/145 (83%)
Query: 9 DVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNG 68
D L E+Q+ EF+EAFS+ DKDGDGCIT EL + ++SL QNPTE ELR+M++E+D DGNG
Sbjct: 2 DQLTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNG 61
Query: 69 TIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEEL 128
T++F EFL +MA KMK+ + +EE++EAF+VFDKD +G++S ELRHVM LGEKL+DEE+
Sbjct: 62 TVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEV 121
Query: 129 EQMILEADSDGDGQVNYEEFARMML 153
++MI AD+DGDGQVNYEEF R+++
Sbjct: 122 DEMIRAADTDGDGQVNYEEFVRVLV 146
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 41/65 (63%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E +EAF + DKDG+G ++ EL + L + ++EE+ MI D DG+G + + EF++
Sbjct: 84 EIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNYEEFVR 143
Query: 78 LMATK 82
++ +K
Sbjct: 144 VLVSK 148
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 197 bits (501), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 97/140 (69%), Positives = 120/140 (85%), Gaps = 1/140 (0%)
Query: 13 EDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEF 72
E+QIAEF+EAFS+ DKDGDG IT +EL + ++SL QNPTE EL++MINEVD DGNGTI+F
Sbjct: 2 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 61
Query: 73 LEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMI 132
EFL +MA KMK+ ++ EE++EAF+VFDKD +GYIS ELRHVM NLGEKLTDEE+++MI
Sbjct: 62 PEFLTMMARKMKDTDS-EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 120
Query: 133 LEADSDGDGQVNYEEFARMM 152
EA+ DGDGQVNYEEF +MM
Sbjct: 121 REANIDGDGQVNYEEFVQMM 140
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 196 bits (499), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 93/146 (63%), Positives = 120/146 (82%)
Query: 7 AEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDG 66
D L E+QIAEF+EAFS+ DKDGDG IT ++L + ++SL QNPTE EL++MINEV DG
Sbjct: 301 TRDQLTEEQIAEFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADG 360
Query: 67 NGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDE 126
NGTI+F +FL +MA KMK+ +++EE++EAF+VF KD +GYIS +LRHVM NLGEKLTDE
Sbjct: 361 NGTIDFPQFLTMMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDE 420
Query: 127 ELEQMILEADSDGDGQVNYEEFARMM 152
E+++MI EA DGDGQVNYE+F +MM
Sbjct: 421 EVDEMIREAGIDGDGQVNYEQFVQMM 446
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 41/65 (63%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E +EAF + KDG+G I+ +L + +L + T+EE+ MI E +DG+G + + +F++
Sbjct: 385 EIREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEVDEMIREAGIDGDGQVNYEQFVQ 444
Query: 78 LMATK 82
+M K
Sbjct: 445 MMTAK 449
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 190 bits (483), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 94/142 (66%), Positives = 114/142 (80%)
Query: 9 DVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNG 68
D L E+QIAEF+EAFS+ DKDGDG IT +EL + +SL QNPTE EL++ INEVD DGNG
Sbjct: 3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNG 62
Query: 69 TIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEEL 128
TI+F EFL A K K+ +++EE++EAF+VFDKD +GYIS ELRHV NLGEKLTDEE+
Sbjct: 63 TIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEV 122
Query: 129 EQMILEADSDGDGQVNYEEFAR 150
+Q I EAD DGDGQVNYEEF +
Sbjct: 123 DQXIREADIDGDGQVNYEEFVQ 144
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E +EAF + DKDG+G I+ EL +L + T+EE+ I E D+DG+G + + EF++
Sbjct: 85 EIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQXIREADIDGDGQVNYEEFVQ 144
Query: 78 LMATK 82
K
Sbjct: 145 XXTAK 149
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 188 bits (478), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 93/142 (65%), Positives = 114/142 (80%)
Query: 9 DVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNG 68
D L E+QIAEF+EAFS+ DKDGDG IT +EL + +SL QNPTE EL++ INEVD DGNG
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNG 61
Query: 69 TIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEEL 128
TI+F EFL A K K+ +++EE++EAF+VFDKD +GYIS ELRHV NLGEKLTDEE+
Sbjct: 62 TIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEV 121
Query: 129 EQMILEADSDGDGQVNYEEFAR 150
++ I EAD DGDGQVNYEEF +
Sbjct: 122 DEXIREADIDGDGQVNYEEFVQ 143
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E +EAF + DKDG+G I+ EL +L + T+EE+ I E D+DG+G + + EF++
Sbjct: 84 EIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYEEFVQ 143
Query: 78 LMATK 82
K
Sbjct: 144 XXTAK 148
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 182 bits (461), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 91/142 (64%), Positives = 111/142 (78%)
Query: 9 DVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNG 68
D L E+QIAEF+EAFS+ DKDGDG IT +EL + +SL NPTE EL++ INEVD DGNG
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNG 61
Query: 69 TIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEEL 128
TI F EFL A K+ +++EE++EAF+VFDKD +GYIS ELRHV NLGEKLTDEE+
Sbjct: 62 TINFPEFLTXXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEV 121
Query: 129 EQMILEADSDGDGQVNYEEFAR 150
++ I EAD DGDGQVNYEEF +
Sbjct: 122 DEXIREADIDGDGQVNYEEFVQ 143
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E +EAF + DKDG+G I+ EL +L + T+EE+ I E D+DG+G + + EF++
Sbjct: 84 EIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYEEFVQ 143
Query: 78 LMATK 82
K
Sbjct: 144 XXTAK 148
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 164 bits (415), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 78/142 (54%), Positives = 109/142 (76%)
Query: 11 LPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTI 70
L E+QIAEF++AF DK+G G I EL + +++L QNPTE EL+++I E + + NG +
Sbjct: 4 LTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQL 63
Query: 71 EFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQ 130
F EF +MA +M+E + +EE++EAFK+FD+D DG+ISP ELR VM+NLGEK+TDEE+++
Sbjct: 64 NFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDE 123
Query: 131 MILEADSDGDGQVNYEEFARMM 152
MI EAD DGDG +NYEEF M+
Sbjct: 124 MIREADFDGDGMINYEEFVWMI 145
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%)
Query: 5 IYAEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDL 64
I A+ + D E +EAF + D+DGDG I+ EL + +L + T+EE+ MI E D
Sbjct: 71 IMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADF 130
Query: 65 DGNGTIEFLEFLKLMATK 82
DG+G I + EF+ +++ K
Sbjct: 131 DGDGMINYEEFVWMISQK 148
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 155 bits (391), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 73/142 (51%), Positives = 111/142 (78%), Gaps = 1/142 (0%)
Query: 11 LPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTI 70
L E+QIAEF+EAF++ DKD +G I+ ELA+ ++SL +P+E E+ +++NE+D+DGN I
Sbjct: 5 LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQI 64
Query: 71 EFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQ 130
EF EFL LM+ ++K N++++EL EAFKVFDK+ DG IS EL+HV+ ++GEKLTD E++
Sbjct: 65 EFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDD 124
Query: 131 MILEADSDGDGQVNYEEFARMM 152
M+ E SDG G++N ++FA ++
Sbjct: 125 MLREV-SDGSGEINIQQFAALL 145
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 154 bits (389), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 73/142 (51%), Positives = 111/142 (78%), Gaps = 1/142 (0%)
Query: 11 LPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTI 70
L E+QIAEF+EAF++ DKD +G I+ ELA+ ++SL +P+E E+ +++NE+D+DGN I
Sbjct: 4 LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQI 63
Query: 71 EFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQ 130
EF EFL LM+ ++K N++++EL EAFKVFDK+ DG IS EL+HV+ ++GEKLTD E++
Sbjct: 64 EFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDD 123
Query: 131 MILEADSDGDGQVNYEEFARMM 152
M+ E SDG G++N ++FA ++
Sbjct: 124 MLREV-SDGSGEINIQQFAALL 144
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 153 bits (387), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 73/142 (51%), Positives = 111/142 (78%), Gaps = 1/142 (0%)
Query: 11 LPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTI 70
L E+QIAEF+EAF++ DKD G I+ ELA+ ++SL +P+E E+ +++NE+D+DGN I
Sbjct: 5 LTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAI 64
Query: 71 EFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQ 130
EF EFL LM+ ++K N++++EL EAFKVFDK+ DG IS EL+HV+ ++GEKLTD E+++
Sbjct: 65 EFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDE 124
Query: 131 MILEADSDGDGQVNYEEFARMM 152
M+ E SDG G++N ++FA ++
Sbjct: 125 MLREV-SDGSGEINIKQFAALL 145
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 139 bits (349), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 66/119 (55%), Positives = 95/119 (79%)
Query: 11 LPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTI 70
L E+QIAEF+EAF++ DKD +G I+ ELA+ ++SL +P+E E+ +++NE+D+DGN I
Sbjct: 4 LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQI 63
Query: 71 EFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELE 129
EF EFL LM+ ++K N++++EL EAFKVFDK+ DG IS EL+HV+ ++GEKLTD ELE
Sbjct: 64 EFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAELE 122
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 40/62 (64%)
Query: 91 ELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEFAR 150
E KEAF +FDKD +G IS +EL VM +LG ++ E+ ++ E D DG+ Q+ + EF
Sbjct: 11 EFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLA 70
Query: 151 MM 152
+M
Sbjct: 71 LM 72
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 138 bits (347), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/142 (50%), Positives = 101/142 (71%)
Query: 11 LPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTI 70
L E+Q E +EAF + D DG G I +EL A+++L P +EE++ MI ++D DG+GTI
Sbjct: 2 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTI 61
Query: 71 EFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQ 130
+F EFL++M KM E +++EE+ +AF++FD D+ G IS L+ V LGE +TDEEL++
Sbjct: 62 DFEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELGENMTDEELQE 121
Query: 131 MILEADSDGDGQVNYEEFARMM 152
MI EAD DGDG+VN EEF R+M
Sbjct: 122 MIDEADRDGDGEVNEEEFFRIM 143
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 133 bits (335), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 68/149 (45%), Positives = 102/149 (68%), Gaps = 3/149 (2%)
Query: 7 AEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDG 66
A L E+ IAEF+ AF M D DG G I+ +EL + ++ L Q PT+EEL +I EVD DG
Sbjct: 7 ARSYLSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDG 66
Query: 67 NGTIEFLEFLKLMATKMKEN---EAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKL 123
+GTI+F EFL +M +MKE+ +++EEL E F++FD++ DGYI EL + GE +
Sbjct: 67 SGTIDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEHV 126
Query: 124 TDEELEQMILEADSDGDGQVNYEEFARMM 152
TDEE+E ++ + D + DG+++++EF +MM
Sbjct: 127 TDEEIESLMKDGDKNNDGRIDFDEFLKMM 155
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 39/63 (61%)
Query: 91 ELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEFAR 150
E K AF +FD D G IS EL VM LG+ T EEL+ +I E D DG G +++EEF
Sbjct: 18 EFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLV 77
Query: 151 MML 153
MM+
Sbjct: 78 MMV 80
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 132 bits (333), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 68/149 (45%), Positives = 102/149 (68%), Gaps = 3/149 (2%)
Query: 7 AEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDG 66
A L E+ IAEF+ AF M D DG G I+ +EL + ++ L Q PT+EEL +I EVD DG
Sbjct: 7 ARSYLSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDG 66
Query: 67 NGTIEFLEFLKLMATKMKEN---EAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKL 123
+GTI+F EFL +M +MKE+ +++EEL E F++FD++ DGYI EL + GE +
Sbjct: 67 SGTIDFEEFLVMMVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAEIFRASGEHV 126
Query: 124 TDEELEQMILEADSDGDGQVNYEEFARMM 152
TDEE+E ++ + D + DG+++++EF +MM
Sbjct: 127 TDEEIESLMKDGDKNNDGRIDFDEFLKMM 155
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 39/63 (61%)
Query: 91 ELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEFAR 150
E K AF +FD D G IS EL VM LG+ T EEL+ +I E D DG G +++EEF
Sbjct: 18 EFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLV 77
Query: 151 MML 153
MM+
Sbjct: 78 MMV 80
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 130 bits (328), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/142 (46%), Positives = 99/142 (69%)
Query: 11 LPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTI 70
L E+Q E +EAF + D DG G I +EL A+++L P +EE++ MI+E+D DG+GTI
Sbjct: 22 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTI 81
Query: 71 EFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQ 130
+F EFL +M KM E +++EE+ +AF++FD D G I+ +LR V LGE LT+EEL++
Sbjct: 82 DFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQE 141
Query: 131 MILEADSDGDGQVNYEEFARMM 152
MI EAD + D +++ +EF R+M
Sbjct: 142 MIAEADRNDDNEIDEDEFIRIM 163
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 129 bits (325), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 106/155 (68%), Gaps = 3/155 (1%)
Query: 1 MSNNIYAEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMIN 60
M A L E+ IAEF+ AF M D DG G I+ +EL + ++ L QNPT+EEL +I
Sbjct: 4 MDQQAEARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIE 63
Query: 61 EVDLDGNGTIEFLEFLKLMATKMKEN---EAQEELKEAFKVFDKDQDGYISPNELRHVMM 117
EVD DG+GTI+F EFL +M +MKE+ +++EEL + F++FDK+ DG+I EL ++
Sbjct: 64 EVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEILR 123
Query: 118 NLGEKLTDEELEQMILEADSDGDGQVNYEEFARMM 152
GE +T+E++E ++ ++D + DG+++++EF +MM
Sbjct: 124 ATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMM 158
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 39/63 (61%)
Query: 91 ELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEFAR 150
E K AF +FD D G IS EL VM LG+ T EEL+ +I E D DG G +++EEF
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
Query: 151 MML 153
MM+
Sbjct: 81 MMV 83
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 129 bits (324), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 66/149 (44%), Positives = 106/149 (71%), Gaps = 3/149 (2%)
Query: 7 AEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDG 66
A L E+ IAEF+ AF M D DG G I+ +EL + ++ L QNPT+EEL +I EVD DG
Sbjct: 10 ARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDG 69
Query: 67 NGTIEFLEFLKLMATKMKEN---EAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKL 123
+GTI+F EFL +M +MKE+ +++EEL++ F++FDK+ DG+I EL ++ GE +
Sbjct: 70 SGTIDFEEFLVMMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILRATGEHV 129
Query: 124 TDEELEQMILEADSDGDGQVNYEEFARMM 152
T+E++E ++ ++D + DG+++++EF +MM
Sbjct: 130 TEEDIEDLMKDSDKNNDGRIDFDEFLKMM 158
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 39/63 (61%)
Query: 91 ELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEFAR 150
E K AF +FD D G IS EL VM LG+ T EEL+ +I E D DG G +++EEF
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
Query: 151 MML 153
MM+
Sbjct: 81 MMV 83
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 128 bits (322), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/141 (47%), Positives = 96/141 (68%)
Query: 12 PEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIE 71
E+Q E +EAF + D DG G I +EL A+++L P +EE++ MI+E+D +G G +
Sbjct: 1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMN 60
Query: 72 FLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQM 131
F +FL +M KM E + +EE+ +AFK+FD D+ G IS L+ V LGE LTDEEL++M
Sbjct: 61 FGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEM 120
Query: 132 ILEADSDGDGQVNYEEFARMM 152
I EAD DGDG+V+ +EF R+M
Sbjct: 121 IDEADRDGDGEVSEQEFLRIM 141
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%)
Query: 4 NIYAEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVD 63
+ + + +D E +AF + D D G I+F+ L K L +N T+EEL+ MI+E D
Sbjct: 66 TVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEAD 125
Query: 64 LDGNGTIEFLEFLKLM 79
DG+G + EFL++M
Sbjct: 126 RDGDGEVSEQEFLRIM 141
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 128 bits (322), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/149 (44%), Positives = 104/149 (69%), Gaps = 3/149 (2%)
Query: 7 AEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDG 66
A L E+ IAEF+ AF M D DG G I+ +EL + ++ L QNPT+EEL +I EVD DG
Sbjct: 7 ARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDG 66
Query: 67 NGTIEFLEFLKLMATKMKEN---EAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKL 123
+GTI+F EFL +M +MKE+ +++EEL F++FDK+ DG+I EL ++ GE +
Sbjct: 67 SGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHV 126
Query: 124 TDEELEQMILEADSDGDGQVNYEEFARMM 152
T+E++E ++ ++D + DG+++++EF +MM
Sbjct: 127 TEEDIEDLMKDSDKNNDGRIDFDEFLKMM 155
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 39/63 (61%)
Query: 91 ELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEFAR 150
E K AF +FD D G IS EL VM LG+ T EEL+ +I E D DG G +++EEF
Sbjct: 18 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 77
Query: 151 MML 153
MM+
Sbjct: 78 MMV 80
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 128 bits (322), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/149 (44%), Positives = 104/149 (69%), Gaps = 3/149 (2%)
Query: 7 AEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDG 66
A L E+ IAEF+ AF M D DG G I+ +EL + ++ L QNPT+EEL +I EVD DG
Sbjct: 10 ARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDG 69
Query: 67 NGTIEFLEFLKLMATKMKEN---EAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKL 123
+GTI+F EFL +M +MKE+ +++EEL F++FDK+ DG+I EL ++ GE +
Sbjct: 70 SGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHV 129
Query: 124 TDEELEQMILEADSDGDGQVNYEEFARMM 152
T+E++E ++ ++D + DG+++++EF +MM
Sbjct: 130 TEEDIEDLMKDSDKNNDGRIDFDEFLKMM 158
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 39/63 (61%)
Query: 91 ELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEFAR 150
E K AF +FD D G IS EL VM LG+ T EEL+ +I E D DG G +++EEF
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
Query: 151 MML 153
MM+
Sbjct: 81 MMV 83
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 126 bits (316), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 65/149 (43%), Positives = 103/149 (69%), Gaps = 3/149 (2%)
Query: 7 AEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDG 66
A L E+ IAEF+ AF M D DG G I+ +EL + ++ L QNPT+EEL +I EVD DG
Sbjct: 10 ARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDG 69
Query: 67 NGTIEFLEFLKLMATKMKEN---EAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKL 123
+GTI+F EFL +M +MKE+ +++EEL F++FDK+ DG+I EL ++ GE +
Sbjct: 70 SGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHV 129
Query: 124 TDEELEQMILEADSDGDGQVNYEEFARMM 152
+E++E ++ ++D + DG+++++EF +MM
Sbjct: 130 IEEDIEDLMKDSDKNNDGRIDFDEFLKMM 158
Score = 56.2 bits (134), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 39/63 (61%)
Query: 91 ELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEFAR 150
E K AF +FD D G IS EL VM LG+ T EEL+ +I E D DG G +++EEF
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
Query: 151 MML 153
MM+
Sbjct: 81 MMV 83
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 120 bits (301), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 75/89 (84%)
Query: 9 DVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNG 68
D L E+QIAEF+EAFS+ DKDGDG IT +EL + ++SL QNPTE EL++MINEVD DGNG
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 69 TIEFLEFLKLMATKMKENEAQEELKEAFK 97
TI+F EFL +MA KMK+ +++EE++EAF+
Sbjct: 62 TIDFPEFLTMMARKMKDTDSEEEIREAFR 90
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 43/62 (69%)
Query: 91 ELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEFAR 150
E KEAF +FDKD DG I+ EL VM +LG+ T+ EL+ MI E D+DG+G +++ EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 151 MM 152
MM
Sbjct: 71 MM 72
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 116 bits (291), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 55/78 (70%), Positives = 67/78 (85%)
Query: 9 DVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNG 68
D+L E+QI +F+EAF + DKDGDGCIT EELA+ I+SLDQNPTEEEL++MI+EVD DGNG
Sbjct: 2 DILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNG 61
Query: 69 TIEFLEFLKLMATKMKEN 86
TIEF EFL LMA K+K+
Sbjct: 62 TIEFDEFLSLMAKKVKDT 79
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 43/62 (69%)
Query: 91 ELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEFAR 150
+ KEAF +FDKD DG I+ EL V+ +L + T+EEL+ MI E D+DG+G + ++EF
Sbjct: 11 DFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLS 70
Query: 151 MM 152
+M
Sbjct: 71 LM 72
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 115 bits (289), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 55/69 (79%), Positives = 64/69 (92%)
Query: 85 ENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVN 144
+ +A+EELKEAFKVFDKDQ+GYIS +ELRHVM+NLGEKLTDEE+EQMI EAD DGDGQVN
Sbjct: 4 DTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVN 63
Query: 145 YEEFARMML 153
YEEF +MM+
Sbjct: 64 YEEFVKMMM 72
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E +EAF + DKD +G I+ EL + +L + T+EE+ MI E DLDG+G + + EF+K
Sbjct: 10 ELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVK 69
Query: 78 LMAT 81
+M T
Sbjct: 70 MMMT 73
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 7/72 (9%)
Query: 51 TEEELRNMINEVDLDGNGTIEFLEFLKLM---ATKMKENEAQEELKEAFKVFDKDQDGYI 107
EEEL+ D D NG I E +M K+ + E ++ +KEA D D DG +
Sbjct: 7 AEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEA----DLDGDGQV 62
Query: 108 SPNELRHVMMNL 119
+ E +MM +
Sbjct: 63 NYEEFVKMMMTV 74
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 115 bits (287), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/67 (82%), Positives = 63/67 (94%)
Query: 87 EAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYE 146
+A+EELKEAFKVFDKDQ+GYIS +ELRHVM+NLGEKLTDEE+EQMI EAD DGDGQVNYE
Sbjct: 1 DAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYE 60
Query: 147 EFARMML 153
EF +MM+
Sbjct: 61 EFVKMMM 67
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E +EAF + DKD +G I+ EL + +L + T+EE+ MI E DLDG+G + + EF+K
Sbjct: 5 ELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVK 64
Query: 78 LMAT 81
+M T
Sbjct: 65 MMMT 68
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 115 bits (287), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 104/156 (66%), Gaps = 6/156 (3%)
Query: 3 NNIYAEDV--LPEDQIAEFQEAFSMLDKDG-DGCITFEELASAIKSLDQNPTEEELRNMI 59
++IY V L E+Q EF+ AF + DGCI+ +EL ++ L QNPT EEL+ MI
Sbjct: 2 DDIYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMI 61
Query: 60 NEVDLDGNGTIEFLEFLKLMATKMKEN---EAQEELKEAFKVFDKDQDGYISPNELRHVM 116
+EVD DG+GT++F EFL +M MK++ + +EEL + F++FDK+ DGYI EL+ ++
Sbjct: 62 DEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIML 121
Query: 117 MNLGEKLTDEELEQMILEADSDGDGQVNYEEFARMM 152
GE +T++++E+++ + D + DG+++Y+EF M
Sbjct: 122 QATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 87 EAQEELKEAFKVFD-KDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNY 145
E + E K AF +F +DG IS EL VM LG+ T EEL++MI E D DG G V++
Sbjct: 15 EQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDF 74
Query: 146 EEFARMML 153
+EF MM+
Sbjct: 75 DEFLVMMV 82
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 114 bits (285), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/75 (72%), Positives = 65/75 (86%)
Query: 9 DVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNG 68
D+L E+QI +F+EAF + DKDGDGCIT EELA+ I+SLDQNPTEEEL++MI+EVD DGNG
Sbjct: 2 DILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNG 61
Query: 69 TIEFLEFLKLMATKM 83
TIEF EFL LMA K+
Sbjct: 62 TIEFDEFLSLMAKKV 76
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 43/62 (69%)
Query: 91 ELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEFAR 150
+ KEAF +FDKD DG I+ EL V+ +L + T+EEL+ MI E D+DG+G + ++EF
Sbjct: 11 DFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLS 70
Query: 151 MM 152
+M
Sbjct: 71 LM 72
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 112 bits (280), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 104/156 (66%), Gaps = 6/156 (3%)
Query: 3 NNIYAEDV--LPEDQIAEFQEAFSMLDKDG-DGCITFEELASAIKSLDQNPTEEELRNMI 59
++IY V L E+Q EF+ AF + DG I+ +EL ++ L QNPT EEL+ MI
Sbjct: 2 DDIYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMI 61
Query: 60 NEVDLDGNGTIEFLEFLKLMATKMKEN---EAQEELKEAFKVFDKDQDGYISPNELRHVM 116
+EVD DG+GT++F EFL +M MK++ +++EEL + F++FDK+ DGYI EL+ ++
Sbjct: 62 DEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIML 121
Query: 117 MNLGEKLTDEELEQMILEADSDGDGQVNYEEFARMM 152
GE +T++++E+++ + D + DG+++Y+EF M
Sbjct: 122 QATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 87 EAQEELKEAFKVFD-KDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNY 145
E + E K AF +F +DG IS EL VM LG+ T EEL++MI E D DG G V++
Sbjct: 15 EQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDF 74
Query: 146 EEFARMMLLAV 156
+EF MM+ ++
Sbjct: 75 DEFLVMMVRSM 85
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 111 bits (278), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 105/156 (67%), Gaps = 6/156 (3%)
Query: 3 NNIYAEDV--LPEDQIAEFQEAFSMLDKDG-DGCITFEELASAIKSLDQNPTEEELRNMI 59
++IY V L E+Q EF+ AF + DG I+ +EL ++ L QNPT EEL+ MI
Sbjct: 2 DDIYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMI 61
Query: 60 NEVDLDGNGTIEFLEFLKLMATKMKEN---EAQEELKEAFKVFDKDQDGYISPNELRHVM 116
+EVD DG+GT++F EFL +M MK++ +++EEL + F+++DK+ DGYI +EL+ ++
Sbjct: 62 DEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMWDKNADGYIDLDELKIML 121
Query: 117 MNLGEKLTDEELEQMILEADSDGDGQVNYEEFARMM 152
GE +T++++E+++ + D + DG+++Y+EF M
Sbjct: 122 QATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
Score = 53.1 bits (126), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 87 EAQEELKEAFKVFD-KDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNY 145
E + E K AF +F +DG IS EL VM LG+ T EEL++MI E D DG G V++
Sbjct: 15 EQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDF 74
Query: 146 EEFARMMLLAV 156
+EF MM+ ++
Sbjct: 75 DEFLVMMVRSM 85
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 111 bits (278), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 105/156 (67%), Gaps = 6/156 (3%)
Query: 3 NNIYAEDV--LPEDQIAEFQEAFSMLDKDG-DGCITFEELASAIKSLDQNPTEEELRNMI 59
++IY V L E+Q EF+ AF + DG I+ +EL ++ L QNPT EEL+ MI
Sbjct: 2 DDIYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMI 61
Query: 60 NEVDLDGNGTIEFLEFLKLMATKMKEN---EAQEELKEAFKVFDKDQDGYISPNELRHVM 116
+EVD DG+GT++F EFL +M MK++ +++EEL + F++FDK+ DGYI +EL+ ++
Sbjct: 62 DEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIML 121
Query: 117 MNLGEKLTDEELEQMILEADSDGDGQVNYEEFARMM 152
GE +T++++E+++ + D + DG+++Y+E+ M
Sbjct: 122 QATGETITEDDIEELMKDGDKNNDGRIDYDEWLEFM 157
Score = 53.1 bits (126), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 87 EAQEELKEAFKVFD-KDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNY 145
E + E K AF +F +DG IS EL VM LG+ T EEL++MI E D DG G V++
Sbjct: 15 EQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDF 74
Query: 146 EEFARMMLLAV 156
+EF MM+ ++
Sbjct: 75 DEFLVMMVRSM 85
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 111 bits (278), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 103/157 (65%), Gaps = 6/157 (3%)
Query: 2 SNNIYAEDV--LPEDQIAEFQEAFSMLDKDG-DGCITFEELASAIKSLDQNPTEEELRNM 58
+ +IY V L E+Q EF+ AF + DG I+ +EL ++ L QNPT EEL+ M
Sbjct: 1 AADIYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEM 60
Query: 59 INEVDLDGNGTIEFLEFLKLMATKMKEN---EAQEELKEAFKVFDKDQDGYISPNELRHV 115
I+EVD DG+GT++F EFL +M MK++ + +EEL + F++FDK+ DGYI EL+ +
Sbjct: 61 IDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIM 120
Query: 116 MMNLGEKLTDEELEQMILEADSDGDGQVNYEEFARMM 152
+ GE +T++++E+++ + D + DG+++Y+EF M
Sbjct: 121 LQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 87 EAQEELKEAFKVFD-KDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNY 145
E + E K AF +F +DG IS EL VM LG+ T EEL++MI E D DG G V++
Sbjct: 15 EQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDF 74
Query: 146 EEFARMMLLAV 156
+EF MM+ ++
Sbjct: 75 DEFLVMMVRSM 85
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 109 bits (273), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 104/156 (66%), Gaps = 6/156 (3%)
Query: 3 NNIYAEDV--LPEDQIAEFQEAFSMLDKDG-DGCITFEELASAIKSLDQNPTEEELRNMI 59
++IY V L E+Q EF+ AF + DG I+ +EL ++ L QNPT EEL+ MI
Sbjct: 2 DDIYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMI 61
Query: 60 NEVDLDGNGTIEFLEFLKLMATKMKEN---EAQEELKEAFKVFDKDQDGYISPNELRHVM 116
+EVD DG+GT++F EFL +M MK++ +++EEL + F++ DK+ DGYI +EL+ ++
Sbjct: 62 DEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMXDKNADGYIDLDELKIML 121
Query: 117 MNLGEKLTDEELEQMILEADSDGDGQVNYEEFARMM 152
GE +T++++E+++ + D + DG+++Y+EF M
Sbjct: 122 QATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 87 EAQEELKEAFKVFD-KDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNY 145
E + E K AF +F +DG IS EL VM LG+ T EEL++MI E D DG G V++
Sbjct: 15 EQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDF 74
Query: 146 EEFARMMLLAV 156
+EF MM+ ++
Sbjct: 75 DEFLVMMVRSM 85
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 109 bits (273), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 104/156 (66%), Gaps = 6/156 (3%)
Query: 3 NNIYAEDV--LPEDQIAEFQEAFSMLDKDG-DGCITFEELASAIKSLDQNPTEEELRNMI 59
++IY V L E+Q EF+ AF + DG I+ +EL ++ L QNPT EEL+ MI
Sbjct: 2 DDIYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMI 61
Query: 60 NEVDLDGNGTIEFLEFLKLMATKMKEN---EAQEELKEAFKVFDKDQDGYISPNELRHVM 116
+EVD DG+GT++F EFL +M MK++ +++EEL + F++FDK+ DGYI +EL+ ++
Sbjct: 62 DEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIML 121
Query: 117 MNLGEKLTDEELEQMILEADSDGDGQVNYEEFARMM 152
GE +T++++E+++ + D + DG+++Y+E M
Sbjct: 122 QATGETITEDDIEELMKDGDKNNDGRIDYDEXLEFM 157
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 87 EAQEELKEAFKVFD-KDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNY 145
E + E K AF +F +DG IS EL VM LG+ T EEL++MI E D DG G V++
Sbjct: 15 EQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDF 74
Query: 146 EEFARMMLLAV 156
+EF MM+ ++
Sbjct: 75 DEFLVMMVRSM 85
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 109 bits (273), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 52/78 (66%), Positives = 65/78 (83%)
Query: 9 DVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNG 68
D L ++QI+EF+EAFS+ DKDGDGCIT +EL + ++SL QNPTE EL++MINEVD DGNG
Sbjct: 2 DQLTDEQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 69 TIEFLEFLKLMATKMKEN 86
TI+F EFL LMA KMK+
Sbjct: 62 TIDFPEFLNLMARKMKDT 79
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 45/67 (67%)
Query: 86 NEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNY 145
+E E KEAF +FDKD DG I+ EL VM +LG+ T+ EL+ MI E D+DG+G +++
Sbjct: 6 DEQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 146 EEFARMM 152
EF +M
Sbjct: 66 PEFLNLM 72
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 109 bits (272), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 51/71 (71%), Positives = 63/71 (88%)
Query: 82 KMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDG 141
KMK+ +++EE++EAF+VFDKD +GYIS ELRHVM NLGEKLTDEE+++MI EAD DGDG
Sbjct: 1 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 60
Query: 142 QVNYEEFARMM 152
QVNYEEF +MM
Sbjct: 61 QVNYEEFVQMM 71
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E +EAF + DKDG+G I+ EL + +L + T+EE+ MI E D+DG+G + + EF++
Sbjct: 10 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 69
Query: 78 LMATK 82
+M K
Sbjct: 70 MMTAK 74
Score = 33.1 bits (74), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 51 TEEELRNMINEVDLDGNGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPN 110
+EEE+R D DGNG I E +M T + E EE+ E + D D DG ++
Sbjct: 7 SEEEIREAFRVFDKDGNGYISAAELRHVM-TNLGEKLTDEEVDEMIREADIDGDGQVNYE 65
Query: 111 ELRHVM 116
E +M
Sbjct: 66 EFVQMM 71
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe
Bound With Er Alpha Peptide
Length = 80
Score = 107 bits (268), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 65/79 (82%)
Query: 9 DVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNG 68
D L E+QIAEF+EAFS+ DKDGDG IT +EL + ++SL QNPTE EL++MINEVD DGNG
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 69 TIEFLEFLKLMATKMKENE 87
TI+F EFL +MA KMK+ +
Sbjct: 62 TIDFPEFLTMMARKMKDTD 80
Score = 65.9 bits (159), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 43/62 (69%)
Query: 91 ELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEFAR 150
E KEAF +FDKD DG I+ EL VM +LG+ T+ EL+ MI E D+DG+G +++ EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 151 MM 152
MM
Sbjct: 71 MM 72
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
Length = 79
Score = 107 bits (268), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/78 (66%), Positives = 64/78 (82%)
Query: 9 DVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNG 68
D L E+QIAEF+EAFS+ DKDGDG IT +EL + ++SL QNPTE EL++MINEVD DGNG
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 69 TIEFLEFLKLMATKMKEN 86
TI+F EFL +MA KMK+
Sbjct: 62 TIDFPEFLTMMARKMKDT 79
Score = 66.2 bits (160), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 43/62 (69%)
Query: 91 ELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEFAR 150
E KEAF +FDKD DG I+ EL VM +LG+ T+ EL+ MI E D+DG+G +++ EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 151 MM 152
MM
Sbjct: 71 MM 72
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 107 bits (267), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/70 (71%), Positives = 62/70 (88%)
Query: 83 MKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQ 142
MK+ +++EE++EAF+VFDKD +GYIS ELRHVM NLGEKLTDEE+++MI EAD DGDGQ
Sbjct: 1 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 60
Query: 143 VNYEEFARMM 152
VNYEEF +MM
Sbjct: 61 VNYEEFVQMM 70
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E +EAF + DKDG+G I+ EL + +L + T+EE+ MI E D+DG+G + + EF++
Sbjct: 9 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 68
Query: 78 LMATK 82
+M K
Sbjct: 69 MMTAK 73
Score = 33.1 bits (74), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 51 TEEELRNMINEVDLDGNGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPN 110
+EEE+R D DGNG I E +M T + E EE+ E + D D DG ++
Sbjct: 6 SEEEIREAFRVFDKDGNGYISAAELRHVM-TNLGEKLTDEEVDEMIREADIDGDGQVNYE 64
Query: 111 ELRHVM 116
E +M
Sbjct: 65 EFVQMM 70
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A
Binding Motif (Nscate) Peptide From The N-Terminal
Cytoplasmic Domain Of The L-Type Voltage-Cated Calcium
Channel Alpha1c Subunit
Length = 77
Score = 107 bits (267), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/76 (68%), Positives = 63/76 (82%)
Query: 9 DVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNG 68
D L E+QIAEF+EAFS+ DKDGDG IT +EL + ++SL QNPTE EL++MINEVD DGNG
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 69 TIEFLEFLKLMATKMK 84
TI+F EFL +MA KMK
Sbjct: 62 TIDFPEFLTMMARKMK 77
Score = 65.9 bits (159), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 43/62 (69%)
Query: 91 ELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEFAR 150
E KEAF +FDKD DG I+ EL VM +LG+ T+ EL+ MI E D+DG+G +++ EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 151 MM 152
MM
Sbjct: 71 MM 72
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human
N60d Calmodulin Refined With Paramagnetism Based
Strategy
Length = 79
Score = 105 bits (263), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 51/78 (65%), Positives = 64/78 (82%)
Query: 9 DVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNG 68
D L E+QIAEF+EAFS+ DKDGDG IT +EL + ++SL QNPTE EL++MINEVD DG+G
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDG 61
Query: 69 TIEFLEFLKLMATKMKEN 86
TI+F EFL +MA KMK+
Sbjct: 62 TIDFPEFLTMMARKMKDT 79
Score = 67.8 bits (164), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 43/62 (69%)
Query: 91 ELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEFAR 150
E KEAF +FDKD DG I+ EL VM +LG+ T+ EL+ MI E D+DGDG +++ EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLT 70
Query: 151 MM 152
MM
Sbjct: 71 MM 72
>pdb|3J04|C Chain C, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|F Chain F, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 148
Score = 105 bits (263), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 94/150 (62%), Gaps = 11/150 (7%)
Query: 11 LPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMI-----NEVDLD 65
E+Q AEF+EAF + D+ GDG I + + +++L QNPT E+ ++ +E++L
Sbjct: 1 FSEEQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLK 60
Query: 66 GNGTIEFLEFLKLMAT--KMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKL 123
T++F +FL +M T K K+ E+ E +VFDK+ +G + E+RHV++ LGEK+
Sbjct: 61 ---TLKFEQFLPMMQTIAKNKDQGCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKM 117
Query: 124 TDEELEQMILEADSDGDGQVNYEEFARMML 153
T+EE+EQ++ D +G +NYEE RM+L
Sbjct: 118 TEEEVEQLV-AGHEDSNGCINYEELVRMVL 146
>pdb|1BR1|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1I84|T Chain T, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|W Chain W, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|3DTP|C Chain C, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|D Chain D, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 150
Score = 105 bits (262), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 94/150 (62%), Gaps = 11/150 (7%)
Query: 11 LPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMI-----NEVDLD 65
E+Q AEF+EAF + D+ GDG I + + +++L QNPT E+ ++ +E++L
Sbjct: 3 FSEEQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLK 62
Query: 66 GNGTIEFLEFLKLMAT--KMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKL 123
T++F +FL +M T K K+ E+ E +VFDK+ +G + E+RHV++ LGEK+
Sbjct: 63 ---TLKFEQFLPMMQTIAKNKDQGCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKM 119
Query: 124 TDEELEQMILEADSDGDGQVNYEEFARMML 153
T+EE+EQ++ D +G +NYEE RM+L
Sbjct: 120 TEEEVEQLV-AGHEDSNGCINYEELVRMVL 148
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 105 bits (262), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 61/67 (91%)
Query: 87 EAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYE 146
+++EELKEAF+VFDKDQ+G+IS ELRHVM NLGEKLTDEE+++MI EAD DGDGQ+NYE
Sbjct: 1 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 60
Query: 147 EFARMML 153
EF ++M+
Sbjct: 61 EFVKVMM 67
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E +EAF + DKD +G I+ EL + +L + T+EE+ MI E D+DG+G I + EF+K
Sbjct: 5 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 64
Query: 78 LMATK 82
+M K
Sbjct: 65 VMMAK 69
Score = 32.7 bits (73), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Query: 51 TEEELRNMINEVDLDGNGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPN 110
+EEEL+ D D NG I E +M T + E EE+ E + D D DG I+
Sbjct: 2 SEEELKEAFRVFDKDQNGFISAAELRHVM-TNLGEKLTDEEVDEMIREADVDGDGQINYE 60
Query: 111 ELRHVMM 117
E VMM
Sbjct: 61 EFVKVMM 67
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal
Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
N-Terminal Domain
Length = 76
Score = 105 bits (262), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/75 (68%), Positives = 62/75 (82%)
Query: 9 DVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNG 68
D L E+QIAEF+EAFS+ DKDGDG IT +EL + ++SL QNPTE EL++MINEVD DGNG
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 69 TIEFLEFLKLMATKM 83
TI+F EFL +MA KM
Sbjct: 62 TIDFPEFLTMMARKM 76
Score = 66.2 bits (160), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 43/62 (69%)
Query: 91 ELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEFAR 150
E KEAF +FDKD DG I+ EL VM +LG+ T+ EL+ MI E D+DG+G +++ EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 151 MM 152
MM
Sbjct: 71 MM 72
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal
Domain
Length = 76
Score = 105 bits (261), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/75 (68%), Positives = 62/75 (82%)
Query: 9 DVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNG 68
D L E+QIAEF+EAFS+ DKDGDG IT +EL + ++SL QNPTE EL++MINEVD DGNG
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 69 TIEFLEFLKLMATKM 83
TI+F EFL +MA KM
Sbjct: 62 TIDFPEFLTMMARKM 76
Score = 65.9 bits (159), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 43/62 (69%)
Query: 91 ELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEFAR 150
E KEAF +FDKD DG I+ EL VM +LG+ T+ EL+ MI E D+DG+G +++ EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 151 MM 152
MM
Sbjct: 71 MM 72
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 103 bits (257), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 59/67 (88%)
Query: 86 NEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNY 145
+++EE++EAF+VFDKD +GYIS ELRHVM NLGEKLTDEE+++MI EAD DGDGQVNY
Sbjct: 1 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 60
Query: 146 EEFARMM 152
EEF +MM
Sbjct: 61 EEFVQMM 67
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 42/64 (65%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E +EAF + DKDG+G I+ EL + +L + T+EE+ MI E D+DG+G + + EF++
Sbjct: 6 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 65
Query: 78 LMAT 81
+M
Sbjct: 66 MMTA 69
Score = 33.5 bits (75), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 51 TEEELRNMINEVDLDGNGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPN 110
+EEE+R D DGNG I E +M T + E EE+ E + D D DG ++
Sbjct: 3 SEEEIREAFRVFDKDGNGYISAAELRHVM-TNLGEKLTDEEVDEMIREADIDGDGQVNYE 61
Query: 111 ELRHVM 116
E +M
Sbjct: 62 EFVQMM 67
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 103 bits (257), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 60/68 (88%)
Query: 85 ENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVN 144
+ +++EE++EAF+VFDKD +GYIS ELRHVM NLGEKLTDEE+++MI EAD DGDGQVN
Sbjct: 1 DTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 60
Query: 145 YEEFARMM 152
YEEF +MM
Sbjct: 61 YEEFVQMM 68
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E +EAF + DKDG+G I+ EL + +L + T+EE+ MI E D+DG+G + + EF++
Sbjct: 7 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 66
Query: 78 LMATK 82
+M K
Sbjct: 67 MMTAK 71
Score = 33.5 bits (75), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 51 TEEELRNMINEVDLDGNGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPN 110
+EEE+R D DGNG I E +M T + E EE+ E + D D DG ++
Sbjct: 4 SEEEIREAFRVFDKDGNGYISAAELRHVM-TNLGEKLTDEEVDEMIREADIDGDGQVNYE 62
Query: 111 ELRHVM 116
E +M
Sbjct: 63 EFVQMM 68
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 103 bits (257), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 50/74 (67%), Positives = 61/74 (82%)
Query: 9 DVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNG 68
D L E+QIAEF+EAFS+ DKDGDG IT +EL + ++SL QNPTE EL++MINEVD DGNG
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 69 TIEFLEFLKLMATK 82
TI+F EFL +MA K
Sbjct: 62 TIDFPEFLTMMARK 75
Score = 66.2 bits (160), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 43/62 (69%)
Query: 91 ELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEFAR 150
E KEAF +FDKD DG I+ EL VM +LG+ T+ EL+ MI E D+DG+G +++ EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 151 MM 152
MM
Sbjct: 71 MM 72
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin
Amino- Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 103 bits (257), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 50/74 (67%), Positives = 61/74 (82%)
Query: 9 DVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNG 68
D L E+QIAEF+EAFS+ DKDGDG IT +EL + ++SL QNPTE EL++MINEVD DGNG
Sbjct: 3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 62
Query: 69 TIEFLEFLKLMATK 82
TI+F EFL +MA K
Sbjct: 63 TIDFPEFLTMMARK 76
Score = 66.2 bits (160), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 43/62 (69%)
Query: 91 ELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEFAR 150
E KEAF +FDKD DG I+ EL VM +LG+ T+ EL+ MI E D+DG+G +++ EF
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 151 MM 152
MM
Sbjct: 72 MM 73
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 103 bits (256), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 59/67 (88%)
Query: 86 NEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNY 145
+++EE++EAF+VFDKD +GYIS ELRHVM NLGEKLTDEE+++MI EAD DGDGQVNY
Sbjct: 1 TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 60
Query: 146 EEFARMM 152
EEF +MM
Sbjct: 61 EEFVQMM 67
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 42/62 (67%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E +EAF + DKDG+G I+ EL + +L + T+EE+ MI E D+DG+G + + EF++
Sbjct: 6 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 65
Query: 78 LM 79
+M
Sbjct: 66 MM 67
Score = 33.5 bits (75), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 51 TEEELRNMINEVDLDGNGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPN 110
+EEE+R D DGNG I E +M T + E EE+ E + D D DG ++
Sbjct: 3 SEEEIREAFRVFDKDGNGYISAAELRHVM-TNLGEKLTDEEVDEMIREADIDGDGQVNYE 61
Query: 111 ELRHVM 116
E +M
Sbjct: 62 EFVQMM 67
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 103 bits (256), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 49/70 (70%), Positives = 61/70 (87%)
Query: 83 MKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQ 142
MK+ +++EE++EAF+V DKD +GYIS ELRHVM NLGEKLTDEE+++MI EAD DGDGQ
Sbjct: 22 MKDTDSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 81
Query: 143 VNYEEFARMM 152
VNYEEF +MM
Sbjct: 82 VNYEEFVQMM 91
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 4 NIYAEDVLPE-DQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEV 62
N+Y + ++ + D E +EAF + DKDG+G I+ EL + +L + T+EE+ MI E
Sbjct: 15 NLYFQSLMKDTDSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA 74
Query: 63 DLDGNGTIEFLEFLKLMATK 82
D+DG+G + + EF+++M K
Sbjct: 75 DIDGDGQVNYEEFVQMMTAK 94
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 51 TEEELRNMINEVDLDGNGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPN 110
+EEE+R D DGNG I E +M T + E EE+ E + D D DG ++
Sbjct: 27 SEEEIREAFRVEDKDGNGYISAAELRHVM-TNLGEKLTDEEVDEMIREADIDGDGQVNYE 85
Query: 111 ELRHVM 116
E +M
Sbjct: 86 EFVQMM 91
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 103 bits (256), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 49/71 (69%), Positives = 60/71 (84%)
Query: 83 MKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQ 142
MKE +++EEL EAFKVFD+D +G IS ELRHVM NLGEKLTD+E+++MI EAD DGDG
Sbjct: 1 MKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGH 60
Query: 143 VNYEEFARMML 153
+NYEEF RMM+
Sbjct: 61 INYEEFVRMMV 71
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 43/65 (66%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E EAF + D+DG+G I+ EL + +L + T++E+ MI E D+DG+G I + EF++
Sbjct: 9 ELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVR 68
Query: 78 LMATK 82
+M +K
Sbjct: 69 MMVSK 73
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 46 LDQNPTEEELRNMINEVDLDGNGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDG 105
+ + +EEEL D DGNG I E +M T + E +E+ E + D D DG
Sbjct: 1 MKEQDSEEELIEAFKVFDRDGNGLISAAELRHVM-TNLGEKLTDDEVDEMIREADIDGDG 59
Query: 106 YISPNELRHVMMN 118
+I+ E +M++
Sbjct: 60 HINYEEFVRMMVS 72
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 102 bits (255), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 48/64 (75%), Positives = 57/64 (89%)
Query: 89 QEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEF 148
+EE++EAF+VFDKD +GYIS ELRHVM NLGEKLTDEE+++MI EAD DGDGQVNYEEF
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 60
Query: 149 ARMM 152
+MM
Sbjct: 61 VQMM 64
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E +EAF + DKDG+G I+ EL + +L + T+EE+ MI E D+DG+G + + EF++
Sbjct: 3 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 62
Query: 78 LMATK 82
+M K
Sbjct: 63 MMTAK 67
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 101 bits (251), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 60/68 (88%)
Query: 85 ENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVN 144
+ +++EE++EAF+VFDKD +GYIS +LRHVM NLGEKLTDEE+++MI EAD DGDGQVN
Sbjct: 2 DTDSEEEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 61
Query: 145 YEEFARMM 152
YE+F +MM
Sbjct: 62 YEDFVQMM 69
Score = 55.8 bits (133), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 43/65 (66%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E +EAF + DKDG+G I+ +L + +L + T+EE+ MI E D+DG+G + + +F++
Sbjct: 8 EIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEDFVQ 67
Query: 78 LMATK 82
+M K
Sbjct: 68 MMTAK 72
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 100 bits (250), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 50/76 (65%), Positives = 61/76 (80%)
Query: 9 DVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNG 68
D L E+QIAEF+EAFS+ DKDGDG IT +EL + ++SL NPTE EL++MINEVD DGNG
Sbjct: 2 DQLTEEQIAEFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNG 61
Query: 69 TIEFLEFLKLMATKMK 84
TI+F EFL +MA MK
Sbjct: 62 TIDFPEFLTMMARIMK 77
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%)
Query: 91 ELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEFAR 150
E KEAF ++DKD DG I+ EL VM +LG T+ EL+ MI E D+DG+G +++ EF
Sbjct: 11 EFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 151 MM 152
MM
Sbjct: 71 MM 72
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 99.8 bits (247), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 58/67 (86%)
Query: 54 ELRNMINEVDLDGNGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELR 113
EL++MINEVD DGNGTI+F EFL +MA KMK+ +++EE++EAF+VFDKD +GYIS ELR
Sbjct: 2 ELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 61
Query: 114 HVMMNLG 120
HVM NLG
Sbjct: 62 HVMTNLG 68
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 17 AEFQEAFSMLDKDGDGCITFEELASAI-KSLDQNPTEEELRNMINEVDLDGNGTIEFLEF 75
AE Q+ + +D DG+G I F E + + + + +EEE+R D DGNG I E
Sbjct: 1 AELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL 60
Query: 76 LKLMA 80
+M
Sbjct: 61 RHVMT 65
Score = 30.8 bits (68), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 127 ELEQMILEADSDGDGQVNYEEFARMM 152
EL+ MI E D+DG+G +++ EF MM
Sbjct: 2 ELQDMINEVDADGNGTIDFPEFLTMM 27
Score = 29.6 bits (65), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSL 46
E +EAF + DKDG+G I+ EL + +L
Sbjct: 39 EIREAFRVFDKDGNGYISAAELRHVMTNL 67
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 99.4 bits (246), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 85/140 (60%), Gaps = 4/140 (2%)
Query: 13 EDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEF 72
+ QI EF+EAF+M+D++ DG I E+L + S+ +NPT+E L M++E G I F
Sbjct: 3 QSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSEAP----GPINF 58
Query: 73 LEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMI 132
FL + K+ + ++ ++ AF FD++ G+I + LR ++ +G++ TDEE+++M
Sbjct: 59 TMFLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMY 118
Query: 133 LEADSDGDGQVNYEEFARMM 152
EA D G NY EF R++
Sbjct: 119 REAPIDKKGNFNYVEFTRIL 138
Score = 35.0 bits (79), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 12 PEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIE 71
PED I + AF+ D++ G I + L + ++ T+EE+ M E +D G
Sbjct: 74 PEDVI---RNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFN 130
Query: 72 FLEFLKLMATKMK 84
++EF +++ K
Sbjct: 131 YVEFTRILKHGAK 143
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 99.0 bits (245), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/141 (44%), Positives = 90/141 (63%)
Query: 11 LPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTI 70
L E+Q E +EAF + D DG G I +EL A ++L P +EE++ I+E+D +G G
Sbjct: 25 LTEEQKQEIREAFDLFDADGTGTIDVKELKVAXRALGFEPKKEEIKKXISEIDKEGTGKX 84
Query: 71 EFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQ 130
F +FL + K E + +EE+ +AFK+FD D+ G IS L+ V LGE LTDEEL++
Sbjct: 85 NFGDFLTVXTQKXSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQE 144
Query: 131 MILEADSDGDGQVNYEEFARM 151
I EAD DGDG+V+ +EF R+
Sbjct: 145 XIDEADRDGDGEVSEQEFLRI 165
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 98.6 bits (244), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 84/142 (59%), Gaps = 3/142 (2%)
Query: 11 LPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTI 70
L E++I +E F M+D D G ITF+EL +K + E E++++++ D+D +GTI
Sbjct: 4 LSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTI 63
Query: 71 EFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQ 130
++ EF+ + + E +E L AF FDKD GYI+ +E++ + G L D ++
Sbjct: 64 DYGEFIA-ATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFG--LDDIHIDD 120
Query: 131 MILEADSDGDGQVNYEEFARMM 152
MI E D D DGQ++Y EFA MM
Sbjct: 121 MIKEIDQDNDGQIDYGEFAAMM 142
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 98.6 bits (244), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 84/138 (60%)
Query: 11 LPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTI 70
L E+Q E EAFS+ D + DG + + EL A+K+L + E+ ++I+E D +G +
Sbjct: 17 LLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLM 76
Query: 71 EFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQ 130
++ +F +M K+ + + +E+K AF++FD D G IS LR V LGE LTDEEL
Sbjct: 77 KYDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRA 136
Query: 131 MILEADSDGDGQVNYEEF 148
MI E D DGDG++N EF
Sbjct: 137 MIEEFDLDGDGEINENEF 154
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 41/74 (55%)
Query: 5 IYAEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDL 64
+ E +L D + E + AF + D D G I+ + L K L + T+EELR MI E DL
Sbjct: 84 VMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDL 143
Query: 65 DGNGTIEFLEFLKL 78
DG+G I EF+ +
Sbjct: 144 DGDGEINENEFIAI 157
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%)
Query: 87 EAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYE 146
E ++E+ EAF +FD + DG++ +EL+ M LG +L E+ +I E DS+G + Y+
Sbjct: 20 EQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYD 79
Query: 147 EFARMM 152
+F +M
Sbjct: 80 DFYIVM 85
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 97.1 bits (240), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 92/147 (62%), Gaps = 5/147 (3%)
Query: 11 LPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTI 70
L ++I E +EAF DKD DG I +L + ++++ PTE EL + +++++ G +
Sbjct: 19 LRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHV 78
Query: 71 EFLEFLKLMATKMKENEAQ----EELKEAFKVFDKDQDGYISPNELRHVMMN-LGEKLTD 125
+F +F++LM K+ A +EL++AF+ FD + DG IS +ELR M LG ++
Sbjct: 79 DFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGH 138
Query: 126 EELEQMILEADSDGDGQVNYEEFARMM 152
++E++I + D +GDG+V++EEF RMM
Sbjct: 139 RDIEEIIRDVDLNGDGRVDFEEFVRMM 165
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 16 IAEFQEAFSMLDKDGDGCITFEELASAIKSL-DQNPTEEELRNMINEVDLDGNGTIEFLE 74
+ E ++AF D +GDG I+ EL A++ L ++ +I +VDL+G+G ++F E
Sbjct: 101 VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 160
Query: 75 FLKLMA 80
F+++M+
Sbjct: 161 FVRMMS 166
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 96.7 bits (239), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 92/147 (62%), Gaps = 5/147 (3%)
Query: 11 LPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTI 70
L ++I E +EAF DKD DG I +L + ++++ PTE EL + +++++ G +
Sbjct: 5 LRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHV 64
Query: 71 EFLEFLKLMATKMKENEAQ----EELKEAFKVFDKDQDGYISPNELRHVMMN-LGEKLTD 125
+F +F++LM K+ A +EL++AF+ FD + DG IS +ELR M LG ++
Sbjct: 65 DFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGH 124
Query: 126 EELEQMILEADSDGDGQVNYEEFARMM 152
++E++I + D +GDG+V++EEF RMM
Sbjct: 125 RDIEEIIRDVDLNGDGRVDFEEFVRMM 151
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 16 IAEFQEAFSMLDKDGDGCITFEELASAIKSL-DQNPTEEELRNMINEVDLDGNGTIEFLE 74
+ E ++AF D +GDG I+ EL A++ L ++ +I +VDL+G+G ++F E
Sbjct: 87 VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 146
Query: 75 FLKLMA 80
F+++M+
Sbjct: 147 FVRMMS 152
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 96.3 bits (238), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 92/147 (62%), Gaps = 5/147 (3%)
Query: 11 LPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTI 70
L ++I E +EAF DKD DG I +L + ++++ PTE EL + +++++ G +
Sbjct: 5 LRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHV 64
Query: 71 EFLEFLKLMATKMKENEAQ----EELKEAFKVFDKDQDGYISPNELRHVMMN-LGEKLTD 125
+F +F++LM K+ A +EL++AF+ FD + DG IS +ELR M LG ++
Sbjct: 65 DFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGH 124
Query: 126 EELEQMILEADSDGDGQVNYEEFARMM 152
++E++I + D +GDG+V++EEF RMM
Sbjct: 125 RDIEEIIRDVDLNGDGRVDFEEFVRMM 151
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 16 IAEFQEAFSMLDKDGDGCITFEELASAIKSL-DQNPTEEELRNMINEVDLDGNGTIEFLE 74
+ E ++AF D +GDG I+ EL A+++L ++ +I +VDL+G+G ++F E
Sbjct: 87 VKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 146
Query: 75 FLKLMA 80
F+++M+
Sbjct: 147 FVRMMS 152
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 96.3 bits (238), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 79/141 (56%), Gaps = 1/141 (0%)
Query: 13 EDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEF 72
+DQ++EF+EAF + D + G IT E L + +K M NE D GNG I+F
Sbjct: 2 DDQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQF 61
Query: 73 LEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMI 132
EFL +M +MK+ +++ L++AF+ FD + GYI L+ ++NLG++L E + +
Sbjct: 62 PEFLSMMGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEFL 121
Query: 133 LEADSDGDGQVNYEEFARMML 153
+++ GQ+ Y+ F M
Sbjct: 122 GITETE-KGQIRYDNFINTMF 141
>pdb|1OE9|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|B Chain B, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 151
Score = 94.7 bits (234), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 85/145 (58%), Gaps = 5/145 (3%)
Query: 13 EDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLD--GNGTI 70
+DQ+ EF+EAF + D+ GDG I + + +++L QNPT E+ ++ D + +
Sbjct: 6 KDQLEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRV 65
Query: 71 EFLEFLKLM--ATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEEL 128
+F FL ++ K + E+ E F+VFDK+ +G + ELRHV+ LGEK+T+EE+
Sbjct: 66 DFETFLPMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEV 125
Query: 129 EQMILEADSDGDGQVNYEEFARMML 153
E +L D +G +NYE F + +L
Sbjct: 126 E-TVLAGHEDSNGCINYEAFLKHIL 149
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 93.6 bits (231), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 80/137 (58%), Gaps = 4/137 (2%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
+ QE F + DKD DG ++ EEL SA++SL +NPT EL + +++ + F
Sbjct: 6 QIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQLNAK---EFDLATFKT 62
Query: 78 LMATKMK-ENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEAD 136
+ +K E +E+ +AF+ DK+ +G I ELR +++NLG+ LT E+E+++ E
Sbjct: 63 VYRKPIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVS 122
Query: 137 SDGDGQVNYEEFARMML 153
GDG +NYE F M++
Sbjct: 123 VSGDGAINYESFVDMLV 139
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 4 NIYAEDV-LPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEV 62
+Y + + P +Q E +AF LDK+G+G I EL + +L T E+ ++ EV
Sbjct: 62 TVYRKPIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEV 121
Query: 63 DLDGNGTIEFLEFLKLMAT 81
+ G+G I + F+ ++ T
Sbjct: 122 SVSGDGAINYESFVDMLVT 140
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 8/61 (13%)
Query: 88 AQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEE 147
+ ++++E F++FDKD DG +S EL + +LG+ T+ EL + GQ+N +E
Sbjct: 3 SADQIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTI--------KGQLNAKE 54
Query: 148 F 148
F
Sbjct: 55 F 55
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 92.0 bits (227), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 80/138 (57%)
Query: 11 LPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTI 70
L E+Q E EAFS+ D + DG + + EL A K+L + E+ ++I+E D +G
Sbjct: 17 LLEEQKQEIYEAFSLFDXNNDGFLDYHELKVAXKALGFELPKREILDLIDEYDSEGRHLX 76
Query: 71 EFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQ 130
++ +F + K+ + + +E+K AF++FD D G IS LR V LGE LTDEEL
Sbjct: 77 KYDDFYIVXGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRA 136
Query: 131 MILEADSDGDGQVNYEEF 148
I E D DGDG++N EF
Sbjct: 137 XIEEFDLDGDGEINENEF 154
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%)
Query: 5 IYAEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDL 64
+ E +L D + E + AF + D D G I+ + L K L + T+EELR I E DL
Sbjct: 84 VXGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAXIEEFDL 143
Query: 65 DGNGTIEFLEFLKLMA 80
DG+G I EF+ +
Sbjct: 144 DGDGEINENEFIAICT 159
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 90.5 bits (223), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 81/138 (58%), Gaps = 3/138 (2%)
Query: 11 LPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTI 70
L E++IA +E F+ +D D G ITFEEL + +K + N E E+ ++ D+D +GTI
Sbjct: 21 LSEEEIAGLKEXFNXIDADKSGQITFEELKAGLKRVGANLKESEILDLXQAADVDNSGTI 80
Query: 71 EFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQ 130
++ EF+ + + E ++ L AF FDKD GYI+P+EL+ G + D +E+
Sbjct: 81 DYKEFIA-ATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEFG--VEDVRIEE 137
Query: 131 MILEADSDGDGQVNYEEF 148
+ + D D DG+++Y EF
Sbjct: 138 LXRDVDQDNDGRIDYNEF 155
Score = 32.7 bits (73), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 22 AFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFL 76
AF+ DKDG G IT +EL A + + + + +VD D +G I++ EF+
Sbjct: 104 AFTYFDKDGSGYITPDELQQACEEF--GVEDVRIEELXRDVDQDNDGRIDYNEFV 156
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 89.7 bits (221), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 89/144 (61%), Gaps = 9/144 (6%)
Query: 14 DQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFL 73
D+I + F LD D G ++ EE S + L QNP ++ +I+ D DGNG ++F
Sbjct: 17 DEIKRLGKRFKKLDLDNSGSLSVEEFMS-LPELQQNPL---VQRVIDIFDTDGNGEVDFK 72
Query: 74 EFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVM-MNLGEKLTDEELEQM- 131
EF++ ++ + + +++L+ AF+++D D+DGYIS EL V+ M +G L D +L+Q+
Sbjct: 73 EFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIV 132
Query: 132 ---ILEADSDGDGQVNYEEFARMM 152
I+ AD DGDG++++EEF ++
Sbjct: 133 DKTIINADKDGDGRISFEEFCAVV 156
Score = 30.0 bits (66), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 15/21 (71%)
Query: 27 DKDGDGCITFEELASAIKSLD 47
DKDGDG I+FEE + + LD
Sbjct: 140 DKDGDGRISFEEFCAVVGGLD 160
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 89.7 bits (221), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 89/144 (61%), Gaps = 9/144 (6%)
Query: 14 DQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFL 73
D+I + F LD D G ++ EE S + L QNP ++ +I+ D DGNG ++F
Sbjct: 3 DEIKRLGKRFKKLDLDNSGSLSVEEFMS-LPELQQNPL---VQRVIDIFDTDGNGEVDFK 58
Query: 74 EFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVM-MNLGEKLTDEELEQM- 131
EF++ ++ + + +++L+ AF+++D D+DGYIS EL V+ M +G L D +L+Q+
Sbjct: 59 EFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIV 118
Query: 132 ---ILEADSDGDGQVNYEEFARMM 152
I+ AD DGDG++++EEF ++
Sbjct: 119 DKTIINADKDGDGRISFEEFCAVV 142
Score = 30.0 bits (66), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 15/21 (71%)
Query: 27 DKDGDGCITFEELASAIKSLD 47
DKDGDG I+FEE + + LD
Sbjct: 126 DKDGDGRISFEEFCAVVGGLD 146
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 89.4 bits (220), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 89/144 (61%), Gaps = 9/144 (6%)
Query: 14 DQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFL 73
D+I + F LD D G ++ EE S + L QNP ++ +I+ D DGNG ++F
Sbjct: 18 DEIKRLGKRFKKLDLDNSGSLSVEEFMS-LPELQQNPL---VQRVIDIFDTDGNGEVDFK 73
Query: 74 EFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVM-MNLGEKLTDEELEQM- 131
EF++ ++ + + +++L+ AF+++D D+DGYIS EL V+ M +G L D +L+Q+
Sbjct: 74 EFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIV 133
Query: 132 ---ILEADSDGDGQVNYEEFARMM 152
I+ AD DGDG++++EEF ++
Sbjct: 134 DKTIINADKDGDGRISFEEFCAVV 157
Score = 30.0 bits (66), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 15/21 (71%)
Query: 27 DKDGDGCITFEELASAIKSLD 47
DKDGDG I+FEE + + LD
Sbjct: 141 DKDGDGRISFEEFCAVVGGLD 161
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 89.4 bits (220), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 89/144 (61%), Gaps = 9/144 (6%)
Query: 14 DQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFL 73
D+I + F LD D G ++ EE S + L QNP ++ +I+ D DGNG ++F
Sbjct: 4 DEIKRLGKRFKKLDLDNSGSLSVEEFMS-LPELQQNPL---VQRVIDIFDTDGNGEVDFK 59
Query: 74 EFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVM-MNLGEKLTDEELEQM- 131
EF++ ++ + + +++L+ AF+++D D+DGYIS EL V+ M +G L D +L+Q+
Sbjct: 60 EFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIV 119
Query: 132 ---ILEADSDGDGQVNYEEFARMM 152
I+ AD DGDG++++EEF ++
Sbjct: 120 DKTIINADKDGDGRISFEEFCAVV 143
Score = 30.0 bits (66), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 15/21 (71%)
Query: 27 DKDGDGCITFEELASAIKSLD 47
DKDGDG I+FEE + + LD
Sbjct: 127 DKDGDGRISFEEFCAVVGGLD 147
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 88/147 (59%), Gaps = 5/147 (3%)
Query: 11 LPEDQIAEFQEAFSMLDK-DGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGT 69
L +Q+ + AF + +G G ++ +++ ++ L T+ +R +I+E D GNG
Sbjct: 7 LSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGD 66
Query: 70 IEFLEF----LKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTD 125
I+F F + + ++ + Q+EL+EAF+++DK+ +GYIS + +R ++ L E L+
Sbjct: 67 IDFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSS 126
Query: 126 EELEQMILEADSDGDGQVNYEEFARMM 152
E+L+ MI E D+DG G V++EEF +M
Sbjct: 127 EDLDAMIDEIDADGSGTVDFEEFMGVM 153
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 48/74 (64%)
Query: 7 AEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDG 66
E+V PE E +EAF + DK+G+G I+ + + + LD+ + E+L MI+E+D DG
Sbjct: 81 GEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADG 140
Query: 67 NGTIEFLEFLKLMA 80
+GT++F EF+ +M
Sbjct: 141 SGTVDFEEFMGVMT 154
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal
Domain Of Yeast Calmodulin
Length = 77
Score = 83.6 bits (205), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 58/74 (78%)
Query: 11 LPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTI 70
L E+QIAEF+EAF++ DKD +G I+ ELA+ ++SL +P+E E+ +++NE+D+DGN I
Sbjct: 4 LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQI 63
Query: 71 EFLEFLKLMATKMK 84
EF EFL LM+ ++K
Sbjct: 64 EFSEFLALMSRQLK 77
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 40/62 (64%)
Query: 91 ELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEFAR 150
E KEAF +FDKD +G IS +EL VM +LG ++ E+ ++ E D DG+ Q+ + EF
Sbjct: 11 EFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLA 70
Query: 151 MM 152
+M
Sbjct: 71 LM 72
>pdb|2W4A|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 145
Score = 83.6 bits (205), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 83/144 (57%), Gaps = 5/144 (3%)
Query: 14 DQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLD--GNGTIE 71
D+I +F+EAF + D+ GD IT ++ +++L QNPT E+ ++ + I
Sbjct: 1 DEINDFKEAFLLFDRTGDAKITLSQVGDIVRALGQNPTNAEINKILGNPSKEEMNAKKIT 60
Query: 72 FLEFLKLM--ATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELE 129
F EFL ++ A K+ E+ E +VFDK+ +G + ELRHV+ LGEK+T+EE
Sbjct: 61 FEEFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEE-V 119
Query: 130 QMILEADSDGDGQVNYEEFARMML 153
+ +++ D +G +NYE F + ++
Sbjct: 120 EELMKGQEDSNGCINYEAFVKHIM 143
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 82.8 bits (203), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 58/81 (71%)
Query: 72 FLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQM 131
F +FL +M KM E + +EE+ +AFK+FD D+ G IS L+ V LGE LTDEEL++M
Sbjct: 3 FGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEM 62
Query: 132 ILEADSDGDGQVNYEEFARMM 152
I EAD DGDG+V+ +EF R+M
Sbjct: 63 IDEADRDGDGEVSEQEFLRIM 83
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%)
Query: 4 NIYAEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVD 63
+ + + +D E +AF + D D G I+F+ L K L +N T+EEL+ MI+E D
Sbjct: 8 TVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEAD 67
Query: 64 LDGNGTIEFLEFLKLM 79
DG+G + EFL++M
Sbjct: 68 RDGDGEVSEQEFLRIM 83
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain
Of Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr,
40 Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle,
Nmr, Minimized Average Structure
Length = 90
Score = 80.9 bits (198), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 56/80 (70%)
Query: 7 AEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDG 66
A L E+ IAEF+ AF M D DG G I+ +EL + ++ L QNPT+EEL +I EVD DG
Sbjct: 10 ARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDG 69
Query: 67 NGTIEFLEFLKLMATKMKEN 86
+GTI+F EFL +M +MKE+
Sbjct: 70 SGTIDFEEFLVMMVRQMKED 89
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 39/63 (61%)
Query: 91 ELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEFAR 150
E K AF +FD D G IS EL VM LG+ T EEL+ +I E D DG G +++EEF
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
Query: 151 MML 153
MM+
Sbjct: 81 MMV 83
>pdb|1M8Q|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|U Chain U, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 147
Score = 79.3 bits (194), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 79/140 (56%), Gaps = 5/140 (3%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLD--GNGTIEFLEF 75
+F+EAF + D+ GD IT ++ ++L QNPT E+ ++ + I F EF
Sbjct: 7 DFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEEF 66
Query: 76 LKLM--ATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMIL 133
L ++ A K+ E+ E +VFDK+ +G + ELRHV+ LGEK+T+EE + ++
Sbjct: 67 LPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEE-VEELM 125
Query: 134 EADSDGDGQVNYEEFARMML 153
+ D +G +NYE F + ++
Sbjct: 126 KGQEDSNGCINYEAFVKHIM 145
Score = 33.1 bits (74), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 88 AQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSD--GDGQVNY 145
A ++ KEAF +FD+ D I+ +++ + LG+ T+ E+ +++ + + +
Sbjct: 4 AADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITF 63
Query: 146 EEFARMMLLAV 156
EEF M+ A
Sbjct: 64 EEFLPMLQAAA 74
>pdb|2MYS|C Chain C, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 149
Score = 79.0 bits (193), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 79/140 (56%), Gaps = 5/140 (3%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLD--GNGTIEFLEF 75
+F+EAF + D+ GD IT ++ ++L QNPT E+ ++ + I F EF
Sbjct: 9 DFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEEF 68
Query: 76 LKLM--ATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMIL 133
L ++ A K+ E+ E +VFDK+ +G + ELRHV+ LGEK+T+EE + ++
Sbjct: 69 LPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEE-VEELM 127
Query: 134 EADSDGDGQVNYEEFARMML 153
+ D +G +NYE F + ++
Sbjct: 128 KGQEDSNGCINYEAFVKHIM 147
Score = 33.1 bits (74), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 88 AQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSD--GDGQVNY 145
A ++ KEAF +FD+ D I+ +++ + LG+ T+ E+ +++ + + +
Sbjct: 6 AADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITF 65
Query: 146 EEFARMMLLAV 156
EEF M+ A
Sbjct: 66 EEFLPMLQAAA 76
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 55/80 (68%)
Query: 7 AEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDG 66
A L E+ IAEF+ AF M D DG G I+ + L + ++ L QNPT+EEL +I EVD DG
Sbjct: 10 ARAFLSEEMIAEFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDG 69
Query: 67 NGTIEFLEFLKLMATKMKEN 86
+GTI+F EFL +M +MKE+
Sbjct: 70 SGTIDFEEFLVMMVRQMKED 89
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 38/63 (60%)
Query: 91 ELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEFAR 150
E K AF +FD D G IS L VM LG+ T EEL+ +I E D DG G +++EEF
Sbjct: 21 EFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
Query: 151 MML 153
MM+
Sbjct: 81 MMV 83
>pdb|1GGW|A Chain A, Cdc4p From Schizosaccharomyces Pombe
Length = 140
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 79/141 (56%), Gaps = 11/141 (7%)
Query: 17 AEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEEL----RNMINEVDLDGNGTIEF 72
+ +++AFS+ D+ G G I + +++ QNPT E+ + EVD++ +F
Sbjct: 5 SPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIESTLPAEVDME-----QF 59
Query: 73 LEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMI 132
L+ L EE + F+VFDKD G I ELR+V+ +LGEKL++EE++++
Sbjct: 60 LQVLN-RPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDEL- 117
Query: 133 LEADSDGDGQVNYEEFARMML 153
L+ DG VNY +F +M+L
Sbjct: 118 LKGVPVKDGMVNYHDFVQMIL 138
>pdb|3DTP|E Chain E, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|F Chain F, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 196
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 87/151 (57%), Gaps = 7/151 (4%)
Query: 2 SNNIYAEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINE 61
+N++A + + Q+ EF+EAF ++D+D DG I+ ++ + SL + TE+EL +M+ E
Sbjct: 44 GSNVFA--MFTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAE 101
Query: 62 VDLDGNGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGE 121
G I F FL + ++ + ++ + AF +FD + DG L+ + GE
Sbjct: 102 A----PGPINFTMFLTIFGDRIAGTDEEDVIVNAFNLFD-EGDGKCKEETLKRSLTTWGE 156
Query: 122 KLTDEELEQMILEADSDGDGQVNYEEFARMM 152
K + +E++Q + EA DG+G ++ ++FA+++
Sbjct: 157 KFSQDEVDQALSEAPIDGNGLIDIKKFAQIL 187
Score = 35.0 bits (79), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 4 NIYAEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVD 63
I+ + + D+ AF++ D +GDG E L ++ + + +++E+ ++E
Sbjct: 113 TIFGDRIAGTDEEDVIVNAFNLFD-EGDGKCKEETLKRSLTTWGEKFSQDEVDQALSEAP 171
Query: 64 LDGNGTIEFLEFLKLMATKMKENEA 88
+DGNG I+ +F +++ KE A
Sbjct: 172 IDGNGLIDIKKFAQILTKGAKEEGA 196
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal
Muscle Troponin-C
Length = 76
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 53/74 (71%)
Query: 11 LPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTI 70
L E+ IAEF+ AF M D DG G I+ +EL + ++ L QNPT+EEL +I EVD DG+GTI
Sbjct: 3 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 62
Query: 71 EFLEFLKLMATKMK 84
+F EFL +M +MK
Sbjct: 63 DFEEFLVMMVRQMK 76
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 39/63 (61%)
Query: 91 ELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEFAR 150
E K AF +FD D G IS EL VM LG+ T EEL+ +I E D DG G +++EEF
Sbjct: 10 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 69
Query: 151 MML 153
MM+
Sbjct: 70 MMV 72
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 77.8 bits (190), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 48/63 (76%)
Query: 90 EELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEFA 149
E+L+ AF+ FD+D DG+I+ +ELR M LG+ L EEL+ MI EAD D DG+VNYEEFA
Sbjct: 6 EDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFA 65
Query: 150 RMM 152
RM+
Sbjct: 66 RML 68
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 39/63 (61%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
+ Q AF D+DGDG IT +EL A+ L Q +EEL MI E D+D +G + + EF +
Sbjct: 7 DLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFAR 66
Query: 78 LMA 80
++A
Sbjct: 67 MLA 69
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 53 EELRNMINEVDLDGNGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNEL 112
E+L+ D DG+G I E + MA + + QEEL + D DQDG ++ E
Sbjct: 6 EDLQVAFRAFDQDGDGHITVDELRRAMAG-LGQPLPQEELDAMIREADVDQDGRVNYEEF 64
Query: 113 RHVM 116
++
Sbjct: 65 ARML 68
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 77.8 bits (190), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 55/80 (68%)
Query: 7 AEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDG 66
A L E+ IAEF+ AF M D DG G I+ +EL + ++ L QNPT+ EL +I EVD DG
Sbjct: 10 ARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDG 69
Query: 67 NGTIEFLEFLKLMATKMKEN 86
+GTI+F EFL +M +MKE+
Sbjct: 70 SGTIDFEEFLVMMVRQMKED 89
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 38/63 (60%)
Query: 91 ELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEFAR 150
E K AF +FD D G IS EL VM LG+ T EL+ +I E D DG G +++EEF
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTIDFEEFLV 80
Query: 151 MML 153
MM+
Sbjct: 81 MMV 83
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172) Of
The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A Repeat Sequence
Of Human Sfi1 (R641-T660)
Length = 79
Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 52/71 (73%)
Query: 82 KMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDG 141
KM E + +EE+ +AFK+FD D+ G IS L+ V LGE LTDEEL++MI EAD DGDG
Sbjct: 3 KMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDG 62
Query: 142 QVNYEEFARMM 152
+V+ +EF R+M
Sbjct: 63 EVSEQEFLRIM 73
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 41/67 (61%)
Query: 13 EDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEF 72
+D E +AF + D D G I+F+ L K L +N T+EEL+ MI+E D DG+G +
Sbjct: 7 KDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSE 66
Query: 73 LEFLKLM 79
EFL++M
Sbjct: 67 QEFLRIM 73
Score = 32.7 bits (73), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 44 KSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQ 103
+ + + T+EE+ D D G I F + LK +A ++ EN EEL+E D+D
Sbjct: 2 QKMSEKDTKEEILKAFKLFDDDETGKISF-KNLKRVAKELGENLTDEELQEMIDEADRDG 60
Query: 104 DGYISPNELRHVM 116
DG +S E +M
Sbjct: 61 DGEVSEQEFLRIM 73
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 75.1 bits (183), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 59/87 (67%), Gaps = 3/87 (3%)
Query: 3 NNIYAEDV--LPEDQIAEFQEAFSMLDKDG-DGCITFEELASAIKSLDQNPTEEELRNMI 59
N+IY V L E+Q EF+ AF + +D DGCI+ +EL ++ L QNPT EEL+ MI
Sbjct: 2 NDIYKAAVEQLTEEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMI 61
Query: 60 NEVDLDGNGTIEFLEFLKLMATKMKEN 86
+EVD DG+GT++F EFL +M MK++
Sbjct: 62 DEVDEDGSGTVDFDEFLVMMVRCMKDD 88
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 87 EAQEELKEAFKVFDKD-QDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNY 145
E + E K AF +F +D +DG IS EL VM LG+ T EEL++MI E D DG G V++
Sbjct: 15 EQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDF 74
Query: 146 EEFARMML 153
+EF MM+
Sbjct: 75 DEFLVMMV 82
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 75.1 bits (183), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 72/125 (57%), Gaps = 4/125 (3%)
Query: 11 LPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTI 70
L + Q+ E +EAF+M+D+D DG I E+L SL + P ++EL M+ E G +
Sbjct: 10 LSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKECP----GQL 65
Query: 71 EFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQ 130
F FL L K+ + ++ L+ AF +FD+D G+I + L+ ++ N+G+ + EE++
Sbjct: 66 NFTAFLTLFGEKVSGTDPEDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKN 125
Query: 131 MILEA 135
+ +A
Sbjct: 126 VWKDA 130
Score = 32.7 bits (73), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 5 IYAEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDL 64
++ E V D + AFSM D+DG G I + L ++++ N ++EE++N+ + L
Sbjct: 73 LFGEKVSGTDPEDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVWKDAPL 132
>pdb|1M46|A Chain A, Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A Class
V Myosin
pdb|1M45|A Chain A, Crystal Structure Of Mlc1p Bound To Iq2 Of Myo2p, A Class
V Myosin
pdb|1N2D|A Chain A, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
pdb|1N2D|B Chain B, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
Length = 148
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 81/135 (60%), Gaps = 6/135 (4%)
Query: 20 QEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMIN-EVDLDGNGTIEFLEFLKL 78
++ F++ DK G G I + L ++++ NPT + ++++IN + L ++ + L
Sbjct: 7 KDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGL 66
Query: 79 MATKMKENEAQEELK-----EAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMIL 133
+ KE +A + K +AF+VFDK+ G +S +LR+++ LGEKLTD E+++++
Sbjct: 67 IEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLK 126
Query: 134 EADSDGDGQVNYEEF 148
+ D +G+++Y++F
Sbjct: 127 GVEVDSNGEIDYKKF 141
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 38/68 (55%)
Query: 9 DVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNG 68
D + + +F +AF + DK+ G ++ +L + L + T+ E+ ++ V++D NG
Sbjct: 75 DATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNG 134
Query: 69 TIEFLEFL 76
I++ +F+
Sbjct: 135 EIDYKKFI 142
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin
C At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 73.9 bits (180), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 59/87 (67%), Gaps = 3/87 (3%)
Query: 3 NNIYAEDV--LPEDQIAEFQEAFSMLDKDG-DGCITFEELASAIKSLDQNPTEEELRNMI 59
N+IY V L ++Q EF+ AF + +D DGCI+ +EL ++ L QNPT EEL+ MI
Sbjct: 2 NDIYKAAVEQLTDEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMI 61
Query: 60 NEVDLDGNGTIEFLEFLKLMATKMKEN 86
+EVD DG+GT++F EFL +M MK++
Sbjct: 62 DEVDEDGSGTVDFDEFLVMMVRCMKDD 88
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 86 NEAQEELKEAFKVFDKD-QDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVN 144
+E + E K AF +F +D +DG IS EL VM LG+ T EEL++MI E D DG G V+
Sbjct: 14 DEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVD 73
Query: 145 YEEFARMML 153
++EF MM+
Sbjct: 74 FDEFLVMMV 82
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 72.8 bits (177), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 87/147 (59%), Gaps = 10/147 (6%)
Query: 16 IAEFQEAFSMLDKDGDGCITFEELASAI-KSLDQNPTEEELRNMINEVDLDGNGTIEFLE 74
+ + + AF LD++G G IT +L + +S P +L +++++D DG+G I++ E
Sbjct: 54 VQKLKAAFLHLDEEGKGNITKLQLRKGLERSGLMLPPNFDL--LLDQIDSDGSGNIDYTE 111
Query: 75 FLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEK--LTDEELEQ-- 130
FL A + +++ + AF+VFD D DG I+ EL HV+ N ++ +T+ ++ Q
Sbjct: 112 FLA--AAIDRRQLSKKLIYCAFRVFDVDNDGEITTAELAHVLFNGNKRGNITERDVNQVK 169
Query: 131 -MILEADSDGDGQVNYEEFARMMLLAV 156
MI E D +GDG++++ EF+ MM L +
Sbjct: 170 KMIREVDKNGDGKIDFYEFSEMMKLTL 196
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal
Sensor Domain Of Centrin
Length = 96
Score = 72.8 bits (177), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 50/73 (68%)
Query: 11 LPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTI 70
L E+Q E +EAF + D DG G I +EL A+++L P +EE++ MI+E+D DG+GTI
Sbjct: 24 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTI 83
Query: 71 EFLEFLKLMATKM 83
+F EFL +M KM
Sbjct: 84 DFEEFLTMMTAKM 96
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%)
Query: 87 EAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYE 146
E ++E++EAF +FD D G I EL+ M LG + EE+++MI E D DG G +++E
Sbjct: 27 EQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFE 86
Query: 147 EFARMM 152
EF MM
Sbjct: 87 EFLTMM 92
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 72.4 bits (176), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 79/153 (51%), Gaps = 16/153 (10%)
Query: 13 EDQIAEFQEAFSMLDKDGDGCITFEELASAIKSL-----------DQNPTEEELRNMINE 61
+D+ E F +DK+GDG + EL K L D + E E+ +++
Sbjct: 331 QDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDA 390
Query: 62 VDLDGNGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGE 121
VD D NG IE+ EF+ + A K ++E L+ AF++FD D G IS EL + G
Sbjct: 391 VDFDKNGYIEYSEFVTV-AMDRKTLLSRERLERAFRMFDSDNSGKISSTELATI---FGV 446
Query: 122 KLTDEELEQMIL-EADSDGDGQVNYEEFARMML 153
D E + +L E D + DG+V+++EF +M+L
Sbjct: 447 SDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLL 479
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 61/123 (49%), Gaps = 13/123 (10%)
Query: 39 LASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK----LM------ATKMKENEA 88
+ S + S D+ +EL + +++D +G+G ++ E ++ LM A+ + +
Sbjct: 324 MGSKLTSQDET---KELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAV 380
Query: 89 QEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEF 148
+ E+ + D D++GYI +E V M+ L+ E LE+ DSD G+++ E
Sbjct: 381 EHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTEL 440
Query: 149 ARM 151
A +
Sbjct: 441 ATI 443
Score = 28.1 bits (61), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 11/89 (12%)
Query: 76 LKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNEL----RHVMMNLGE-------KLT 124
L M +K+ + +EL F DK+ DG + EL + +M G+
Sbjct: 321 LLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAV 380
Query: 125 DEELEQMILEADSDGDGQVNYEEFARMML 153
+ E++Q++ D D +G + Y EF + +
Sbjct: 381 EHEVDQVLDAVDFDKNGYIEYSEFVTVAM 409
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 79/153 (51%), Gaps = 16/153 (10%)
Query: 13 EDQIAEFQEAFSMLDKDGDGCITFEELASAIKSL-----------DQNPTEEELRNMINE 61
+D+ E F +DK+GDG + EL K L D + E E+ +++
Sbjct: 354 QDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDA 413
Query: 62 VDLDGNGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGE 121
VD D NG IE+ EF+ + A K ++E L+ AF++FD D G IS EL + G
Sbjct: 414 VDFDKNGYIEYSEFVTV-AMDRKTLLSRERLERAFRMFDSDNSGKISSTELATI---FGV 469
Query: 122 KLTDEELEQMIL-EADSDGDGQVNYEEFARMML 153
D E + +L E D + DG+V+++EF +M+L
Sbjct: 470 SDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLL 502
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 61/124 (49%), Gaps = 13/124 (10%)
Query: 39 LASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK----LM------ATKMKENEA 88
+ S + S D+ +EL + +++D +G+G ++ E ++ LM A+ + +
Sbjct: 347 MGSKLTSQDET---KELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAV 403
Query: 89 QEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEF 148
+ E+ + D D++GYI +E V M+ L+ E LE+ DSD G+++ E
Sbjct: 404 EHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTEL 463
Query: 149 ARMM 152
A +
Sbjct: 464 ATIF 467
Score = 28.1 bits (61), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 11/89 (12%)
Query: 76 LKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNEL----RHVMMNLGE-------KLT 124
L M +K+ + +EL F DK+ DG + EL + +M G+
Sbjct: 344 LLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAV 403
Query: 125 DEELEQMILEADSDGDGQVNYEEFARMML 153
+ E++Q++ D D +G + Y EF + +
Sbjct: 404 EHEVDQVLDAVDFDKNGYIEYSEFVTVAM 432
>pdb|2OS8|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 81/150 (54%), Gaps = 6/150 (4%)
Query: 11 LPEDQIAEFQEAFSMLD-KDG-DGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNG 68
L +D+I + +E F + D DG DG + ++ + L NP E++ + + G
Sbjct: 4 LSQDEIDDLKEVFELFDFWDGRDGAVDAFKIGDVCRCLGINPRNEDVFAVGGTHKM-GEK 62
Query: 69 TIEFLEFLKLMATKMK-ENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEE 127
++ F EFL M E + EAFK FD++ G+IS ELRHV+ LGE+L+DEE
Sbjct: 63 SLPFEEFLPAYEGLMDCEQGTYADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEE 122
Query: 128 LEQMILEAD--SDGDGQVNYEEFARMMLLA 155
++++I D D +G V YEEF + ++
Sbjct: 123 VDEIINLTDLQEDLEGNVKYEEFVKKVMTG 152
>pdb|3PN7|C Chain C, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|F Chain F, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|C Chain C, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|F Chain F, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TUY|C Chain C, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|F Chain F, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 156
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 81/150 (54%), Gaps = 6/150 (4%)
Query: 11 LPEDQIAEFQEAFSMLD-KDG-DGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNG 68
L +D+I + +E F + D DG DG + ++ + L NP E++ + + G
Sbjct: 3 LSQDEIDDLKEVFELFDFWDGRDGAVDAFKIGDVCRCLGINPRNEDVFAVGGTHKM-GEK 61
Query: 69 TIEFLEFLKLMATKMK-ENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEE 127
++ F EFL M E + EAFK FD++ G+IS ELRHV+ LGE+L+DEE
Sbjct: 62 SLPFEEFLPAYEGLMDCEQGTYADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEE 121
Query: 128 LEQMILEAD--SDGDGQVNYEEFARMMLLA 155
++++I D D +G V YEEF + ++
Sbjct: 122 VDEIINLTDLQEDLEGNVKYEEFVKKVMTG 151
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 79/153 (51%), Gaps = 16/153 (10%)
Query: 13 EDQIAEFQEAFSMLDKDGDGCITFEELASAIKSL-----------DQNPTEEELRNMINE 61
+D+ E F +DK+GDG + EL K L D + E E+ +++
Sbjct: 355 QDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDA 414
Query: 62 VDLDGNGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGE 121
VD D NG IE+ EF+ + A K ++E L+ AF++FD D G IS EL + G
Sbjct: 415 VDFDKNGYIEYSEFVTV-AMDRKTLLSRERLERAFRMFDSDNSGKISSTELATI---FGV 470
Query: 122 KLTDEELEQMIL-EADSDGDGQVNYEEFARMML 153
D E + +L E D + DG+V+++EF +M+L
Sbjct: 471 SDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLL 503
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 61/124 (49%), Gaps = 13/124 (10%)
Query: 39 LASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK----LM------ATKMKENEA 88
+ S + S D+ +EL + +++D +G+G ++ E ++ LM A+ + +
Sbjct: 348 MGSKLTSQDET---KELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAV 404
Query: 89 QEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEF 148
+ E+ + D D++GYI +E V M+ L+ E LE+ DSD G+++ E
Sbjct: 405 EHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTEL 464
Query: 149 ARMM 152
A +
Sbjct: 465 ATIF 468
Score = 28.1 bits (61), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 11/89 (12%)
Query: 76 LKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNEL----RHVMMNLGE-------KLT 124
L M +K+ + +EL F DK+ DG + EL + +M G+
Sbjct: 345 LLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAV 404
Query: 125 DEELEQMILEADSDGDGQVNYEEFARMML 153
+ E++Q++ D D +G + Y EF + +
Sbjct: 405 EHEVDQVLDAVDFDKNGYIEYSEFVTVAM 433
>pdb|1DFK|Y Chain Y, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Y Chain Y, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|W Chain W, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 139
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 81/142 (57%), Gaps = 5/142 (3%)
Query: 11 LPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTI 70
LP+ QI E +EAFSM+D D DG ++ E++ + + L + P ++EL M+ E G +
Sbjct: 1 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKE----APGPL 56
Query: 71 EFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQ 130
F FL + + K+ +++E ++ AF +FD+ + ++ ++ ++ N+G+ +E+
Sbjct: 57 NFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRM 116
Query: 131 MILEADSDGDGQVNYEEFARMM 152
EA +G G+ +Y +F M+
Sbjct: 117 TFKEAPVEG-GKFDYVKFTAMI 137
>pdb|1WDC|B Chain B, Scallop Myosin Regulatory Domain
pdb|1B7T|Y Chain Y, Myosin Digested By Papain
pdb|1KK7|Y Chain Y, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|B Chain B, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|B Chain B, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|B Chain B, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Y Chain Y, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Y Chain Y, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|B Chain B, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JTD|B Chain B, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
pdb|3JVT|B Chain B, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 81/142 (57%), Gaps = 5/142 (3%)
Query: 11 LPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTI 70
LP+ QI E +EAFSM+D D DG ++ E++ + + L + P ++EL M+ E G +
Sbjct: 12 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAP----GPL 67
Query: 71 EFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQ 130
F FL + + K+ +++E ++ AF +FD+ + ++ ++ ++ N+G+ +E+
Sbjct: 68 NFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRM 127
Query: 131 MILEADSDGDGQVNYEEFARMM 152
EA +G G+ +Y +F M+
Sbjct: 128 TFKEAPVEG-GKFDYVKFTAMI 148
>pdb|1SCM|B Chain B, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 145
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 81/142 (57%), Gaps = 5/142 (3%)
Query: 11 LPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTI 70
LP+ QI E +EAFSM+D D DG ++ E++ + + L + P ++EL M+ E G +
Sbjct: 1 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAP----GPL 56
Query: 71 EFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQ 130
F FL + + K+ +++E ++ AF +FD+ + ++ ++ ++ N+G+ +E+
Sbjct: 57 NFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRM 116
Query: 131 MILEADSDGDGQVNYEEFARMM 152
EA +G G+ +Y +F M+
Sbjct: 117 TFKEAPVEG-GKFDYVKFTAMI 137
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 73/130 (56%), Gaps = 10/130 (7%)
Query: 23 FSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLKLMATK 82
F LD +GDG +++EE+ + + S E+ L+ + +D+DGNG I+ EF K A
Sbjct: 6 FKQLDANGDGSVSYEEVKAFVSSKRPIKNEQLLQLIFKAIDIDGNGEIDLAEFTKFAAA- 64
Query: 83 MKENEAQEE---LKEAFKVFDKDQDGYISPNELRHVMMNLG-EKLTDEELEQMILEADSD 138
+KE + +E LK +K+ D D DG ++ E+ G EK+ D+ I++AD++
Sbjct: 65 VKEQDLSDEKVGLKILYKLMDADGDGKLTKEEVTTFFKKFGYEKVVDQ-----IMKADAN 119
Query: 139 GDGQVNYEEF 148
GDG + EEF
Sbjct: 120 GDGYITLEEF 129
Score = 31.6 bits (70), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 96 FKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEA-DSDGDGQVNYEEFARM 151
FK D + DG +S E++ ++ + +E+L Q+I +A D DG+G+++ EF +
Sbjct: 6 FKQLDANGDGSVSYEEVK-AFVSSKRPIKNEQLLQLIFKAIDIDGNGEIDLAEFTKF 61
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 58/87 (66%), Gaps = 3/87 (3%)
Query: 3 NNIYAEDV--LPEDQIAEFQEAFSMLDKDG-DGCITFEELASAIKSLDQNPTEEELRNMI 59
++IY V L E+Q EF+ AF + + DGCI+ +EL ++ L QNPT EEL+ MI
Sbjct: 2 DDIYKAAVEQLTEEQKNEFKAAFDIFVQGAEDGCISTKELGKVMRMLGQNPTPEELQEMI 61
Query: 60 NEVDLDGNGTIEFLEFLKLMATKMKEN 86
+EVD DG+GT++F EFL +M MK++
Sbjct: 62 DEVDEDGSGTVDFDEFLVMMVRCMKDD 88
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 87 EAQEELKEAFKVFDKD-QDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNY 145
E + E K AF +F + +DG IS EL VM LG+ T EEL++MI E D DG G V++
Sbjct: 15 EQKNEFKAAFDIFVQGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDF 74
Query: 146 EEFARMML 153
+EF MM+
Sbjct: 75 DEFLVMMV 82
>pdb|2EC6|C Chain C, Placopecten Striated Muscle Myosin Ii
Length = 156
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 81/148 (54%), Gaps = 6/148 (4%)
Query: 11 LPEDQIAEFQEAFSMLD-KDG-DGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNG 68
L +D+I + ++ F + D DG DG + +L + L NP E++ + + G
Sbjct: 3 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKM-GEK 61
Query: 69 TIEFLEFLKLMATKMK-ENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEE 127
++ F EFL M E + EAFK FD++ G+IS ELRHV+ LGE+L+DEE
Sbjct: 62 SLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEE 121
Query: 128 LEQMILEAD--SDGDGQVNYEEFARMML 153
++++I D D +G V YEEF + ++
Sbjct: 122 VDEIINLTDLQEDLEGNVKYEEFVKKVM 149
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 87/145 (60%), Gaps = 10/145 (6%)
Query: 16 IAEFQEAFSMLDKDGDGCITFEELASAI-KSLDQNPTEEELRNMINEVDLDGNGTIEFLE 74
+ + + F +LD+DG G IT E+L + K + P +L +++++D DG+G I++ E
Sbjct: 51 VEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLPYNFDL--LLDQIDSDGSGKIDYTE 108
Query: 75 FLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEK--LTDEE---LE 129
F+ A ++ +++ + AF+VFD D DG I+ EL H++ N +K +T + ++
Sbjct: 109 FI--AAALDRKQLSKKLIYCAFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVK 166
Query: 130 QMILEADSDGDGQVNYEEFARMMLL 154
+MI + D + DG++++ EF+ MM L
Sbjct: 167 RMIRDVDKNNDGKIDFHEFSEMMKL 191
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 72 FLEFLKLMATKMKENEAQ---EELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEEL 128
L+F KL T + + E+LK F V D+D GYI+ +L+ + G KL
Sbjct: 31 LLKFQKLAMTIIAQQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLP-YNF 89
Query: 129 EQMILEADSDGDGQVNYEEF 148
+ ++ + DSDG G+++Y EF
Sbjct: 90 DLLLDQIDSDGSGKIDYTEF 109
>pdb|2OS8|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 77/142 (54%), Gaps = 5/142 (3%)
Query: 11 LPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTI 70
LP+ QI E +EAF+M+D++ DG I +L SL + P ++EL M+ E G +
Sbjct: 13 LPQKQIQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEA----PGPL 68
Query: 71 EFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQ 130
F FL + + K+ +++E ++ AF +FD+ ++ ++ ++ N+G+ +E+
Sbjct: 69 NFTMFLSIFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMRM 128
Query: 131 MILEADSDGDGQVNYEEFARMM 152
EA +G G+ +Y F M+
Sbjct: 129 TFKEAPVEG-GKFDYVRFVAMI 149
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal Domain
Of Akazara Scallop Troponin C In Complex With A Troponin
I Fragment
Length = 74
Score = 70.5 bits (171), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 49/65 (75%)
Query: 89 QEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEF 148
+ ELKEAF+V DK++ G I + LR ++ +LG++LT++E+E MI E D+DG G V+YEEF
Sbjct: 6 ERELKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTVDYEEF 65
Query: 149 ARMML 153
+M+
Sbjct: 66 KCLMM 70
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 41/64 (64%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E +EAF +LDK+ G I + L +KSL TE+E+ NMI E D DG+GT+++ EF
Sbjct: 8 ELKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTVDYEEFKC 67
Query: 78 LMAT 81
LM +
Sbjct: 68 LMMS 71
>pdb|1KK8|B Chain B, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 139
Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
Query: 12 PEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIE 71
P+ QI E +EAFSM+D D DG ++ E++ + + L + P ++EL M+ E G +
Sbjct: 1 PQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAP----GPLN 56
Query: 72 FLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQM 131
F FL + + K+ +++E ++ AF +FD+ + ++ ++ ++ N+G+ +E+
Sbjct: 57 FTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMT 116
Query: 132 ILEADSDGDGQVNYEEFARMM 152
EA +G G+ +Y +F M+
Sbjct: 117 FKEAPVEG-GKFDYVKFTAMI 136
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 70.1 bits (170), Expect = 5e-13, Method: Composition-based stats.
Identities = 50/153 (32%), Positives = 76/153 (49%), Gaps = 16/153 (10%)
Query: 13 EDQIAEFQEAFSMLDKDGDGCITFEELASAIKSL-----------DQNPTEEELRNMINE 61
+D+ E F DK+GDG + EL K L D + E E+ +++
Sbjct: 331 QDETKELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAVEHEVDQVLDA 390
Query: 62 VDLDGNGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGE 121
VD D NG IE+ EF+ + A K ++E L+ AF+ FD D G IS EL + G
Sbjct: 391 VDFDKNGYIEYSEFVTV-AXDRKTLLSRERLERAFRXFDSDNSGKISSTELATI---FGV 446
Query: 122 KLTDEELEQMIL-EADSDGDGQVNYEEFARMML 153
D E + +L E D + DG+V+++EF + +L
Sbjct: 447 SDVDSETWKSVLSEVDKNNDGEVDFDEFQQXLL 479
Score = 26.2 bits (56), Expect = 7.4, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 36/80 (45%), Gaps = 11/80 (13%)
Query: 80 ATKMKENEAQEELKEAFKVFDKDQDGYISPNEL----RHVMMNLGEKLT-------DEEL 128
+K+ + +EL F DK+ DG + EL + + G+ + + E+
Sbjct: 325 GSKLTSQDETKELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAVEHEV 384
Query: 129 EQMILEADSDGDGQVNYEEF 148
+Q++ D D +G + Y EF
Sbjct: 385 DQVLDAVDFDKNGYIEYSEF 404
>pdb|2JXL|A Chain A, Solution Structure Of Cardiac N-Domain Troponin C Mutant
F77w-V82a
Length = 89
Score = 70.1 bits (170), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 58/87 (66%), Gaps = 3/87 (3%)
Query: 3 NNIYAEDV--LPEDQIAEFQEAFSMLDKDG-DGCITFEELASAIKSLDQNPTEEELRNMI 59
++IY V L E+Q EF+ AF + DGCI+ +EL ++ L QNPT EEL+ MI
Sbjct: 2 DDIYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMI 61
Query: 60 NEVDLDGNGTIEFLEFLKLMATKMKEN 86
+EVD DG+GT++F E+L +MA MK++
Sbjct: 62 DEVDEDGSGTVDFDEWLVMMARCMKDD 88
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 87 EAQEELKEAFKVFD-KDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNY 145
E + E K AF +F +DG IS EL VM LG+ T EEL++MI E D DG G V++
Sbjct: 15 EQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDF 74
Query: 146 EEFARMM 152
+E+ MM
Sbjct: 75 DEWLVMM 81
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac
Troponin-I(147- 163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain
Of Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 69.3 bits (168), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 57/87 (65%), Gaps = 3/87 (3%)
Query: 3 NNIYAEDV--LPEDQIAEFQEAFSMLDKDG-DGCITFEELASAIKSLDQNPTEEELRNMI 59
++IY V L E+Q EF+ AF + DGCI+ +EL ++ L QNPT EEL+ MI
Sbjct: 2 DDIYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMI 61
Query: 60 NEVDLDGNGTIEFLEFLKLMATKMKEN 86
+EVD DG+GT++F EFL +M MK++
Sbjct: 62 DEVDEDGSGTVDFDEFLVMMVRCMKDD 88
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 87 EAQEELKEAFKVFD-KDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNY 145
E + E K AF +F +DG IS EL VM LG+ T EEL++MI E D DG G V++
Sbjct: 15 EQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDF 74
Query: 146 EEFARMML 153
+EF MM+
Sbjct: 75 DEFLVMMV 82
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 81/148 (54%), Gaps = 6/148 (4%)
Query: 11 LPEDQIAEFQEAFSMLD-KDG-DGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNG 68
L +D+I + ++ F + D DG DG + +L + L NP E++ + + G
Sbjct: 1 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKM-GEK 59
Query: 69 TIEFLEFLKLMATKMK-ENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEE 127
++ F EFL M E + EAFK FD++ G+IS ELRHV+ LGE+L+DE+
Sbjct: 60 SLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDED 119
Query: 128 LEQMILEAD--SDGDGQVNYEEFARMML 153
++++I D D +G V YE+F + ++
Sbjct: 120 VDEIIKLTDLQEDLEGNVKYEDFVKKVM 147
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 81/148 (54%), Gaps = 6/148 (4%)
Query: 11 LPEDQIAEFQEAFSMLD-KDG-DGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNG 68
L +D+I + ++ F + D DG DG + +L + L NP E++ + + G
Sbjct: 3 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKM-GEK 61
Query: 69 TIEFLEFLKLMATKMK-ENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEE 127
++ F EFL M E + EAFK FD++ G+IS ELRHV+ LGE+L+DE+
Sbjct: 62 SLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDED 121
Query: 128 LEQMILEAD--SDGDGQVNYEEFARMML 153
++++I D D +G V YE+F + ++
Sbjct: 122 VDEIIKLTDLQEDLEGNVKYEDFVKKVM 149
>pdb|3PN7|B Chain B, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|E Chain E, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|B Chain B, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|E Chain E, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
Length = 161
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 82/151 (54%), Gaps = 7/151 (4%)
Query: 2 SNNIYAEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINE 61
++N++A LP+ + E +EAF+M+D++ DG I +L SL + P ++EL M+ E
Sbjct: 10 TSNVFAR--LPQKLMQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKE 67
Query: 62 VDLDGNGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGE 121
G + F FL + + K+ +++E ++ AF +FD+ ++ ++ ++ N+G+
Sbjct: 68 AP----GPLNFTMFLSIFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGD 123
Query: 122 KLTDEELEQMILEADSDGDGQVNYEEFARMM 152
+E+ EA +G G+ +Y F M+
Sbjct: 124 NFNKDEMRMTFKEAPVEG-GKFDYVRFVAMI 153
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 68.6 bits (166), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 81/148 (54%), Gaps = 6/148 (4%)
Query: 11 LPEDQIAEFQEAFSMLD-KDG-DGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNG 68
L +D+I + ++ F + D DG DG + +L + L NP E++ + + G
Sbjct: 3 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKM-GEK 61
Query: 69 TIEFLEFLKLMATKMK-ENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEE 127
++ F EFL M E + EAFK FD++ G+IS ELRHV+ LGE+L+DE+
Sbjct: 62 SLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDED 121
Query: 128 LEQMILEAD--SDGDGQVNYEEFARMML 153
++++I D D +G V YE+F + ++
Sbjct: 122 VDEIIKLTDLQEDLEGNVKYEDFVKKVM 149
>pdb|2MYS|B Chain B, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
pdb|1I84|U Chain U, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|Z Chain Z, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 166
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 80/152 (52%), Gaps = 7/152 (4%)
Query: 2 SNNIYAEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQ-NPTEEELRNMIN 60
S+N+++ + E +I +F+EAF+++D++ DG I ++L ++ + N EEL MI
Sbjct: 12 SSNVFS--MFDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIK 69
Query: 61 EVDLDGNGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLG 120
E +G I F FL + K+K + ++ + AFKV D D G I + L ++ G
Sbjct: 70 EA----SGPINFTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGG 125
Query: 121 EKLTDEELEQMILEADSDGDGQVNYEEFARMM 152
+ T EE++ M D G V+Y+ ++
Sbjct: 126 GRFTPEEIKNMWAAFPPDVAGNVDYKNICYVI 157
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 81/153 (52%), Gaps = 15/153 (9%)
Query: 14 DQIAEFQEAFSMLDKDGDGCITFEELASA------IKSLDQNP--------TEEELRNMI 59
D+ + E F LD + DG + +EL +K +D N E+++ +++
Sbjct: 328 DETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLM 387
Query: 60 NEVDLDGNGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNL 119
+D+DG+G+IE+ EF+ A ++E ++ AFK+FDKD G IS EL +
Sbjct: 388 PLLDMDGSGSIEYSEFIA-SAIDRTILLSRERMERAFKMFDKDGSGKISTKELFKLFSQA 446
Query: 120 GEKLTDEELEQMILEADSDGDGQVNYEEFARMM 152
+ EELE +I + D++ DG+V++ EF M+
Sbjct: 447 DSSIQMEELESIIEQVDNNKDGEVDFNEFVEML 479
Score = 33.9 bits (76), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 51/110 (46%), Gaps = 10/110 (9%)
Query: 13 EDQIAEFQEAFSMLDKDGDGCITFEE-LASAIKSLDQNP--TEEELRNMINEVDLDGNGT 69
EDQI +LD DG G I + E +ASAI D+ + E + D DG+G
Sbjct: 380 EDQIDSL---MPLLDMDGSGSIEYSEFIASAI---DRTILLSRERMERAFKMFDKDGSGK 433
Query: 70 IEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNL 119
I E KL + + + EEL+ + D ++DG + NE ++ N
Sbjct: 434 ISTKELFKLFS-QADSSIQMEELESIIEQVDNNKDGEVDFNEFVEMLQNF 482
>pdb|3TUY|B Chain B, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|E Chain E, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 161
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 81/151 (53%), Gaps = 7/151 (4%)
Query: 2 SNNIYAEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINE 61
+ N++A LP+ + E +EAF+M+D++ DG I +L SL + P ++EL M+ E
Sbjct: 10 TXNVFAR--LPQKLMQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKE 67
Query: 62 VDLDGNGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGE 121
G + F FL + + K+ +++E ++ AF +FD+ ++ ++ ++ N+G+
Sbjct: 68 AP----GPLNFTMFLSIFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGD 123
Query: 122 KLTDEELEQMILEADSDGDGQVNYEEFARMM 152
+E+ EA +G G+ +Y F M+
Sbjct: 124 NFNKDEMRMTFKEAPVEG-GKFDYVRFVAMI 153
>pdb|2KGB|C Chain C, Nmr Solution Of The Regulatory Domain Cardiac
F77w-Troponin C In Complex With The Cardiac Troponin I
144-163 Switch Peptide
Length = 89
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 57/87 (65%), Gaps = 3/87 (3%)
Query: 3 NNIYAEDV--LPEDQIAEFQEAFSMLDKDG-DGCITFEELASAIKSLDQNPTEEELRNMI 59
++IY V L E+Q EF+ AF + DGCI+ +EL ++ L QNPT EEL+ MI
Sbjct: 2 DDIYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMI 61
Query: 60 NEVDLDGNGTIEFLEFLKLMATKMKEN 86
+EVD DG+GT++F E+L +M MK++
Sbjct: 62 DEVDEDGSGTVDFDEWLVMMVRCMKDD 88
Score = 52.8 bits (125), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 87 EAQEELKEAFKVFD-KDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNY 145
E + E K AF +F +DG IS EL VM LG+ T EEL++MI E D DG G V++
Sbjct: 15 EQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDF 74
Query: 146 EEFARMML 153
+E+ MM+
Sbjct: 75 DEWLVMMV 82
>pdb|2W4T|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 151
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 80/146 (54%), Gaps = 6/146 (4%)
Query: 13 EDQIAEFQEAFSMLD-KDG-DGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTI 70
+D+I + ++ F + D DG DG + +L + L NP E++ + + G ++
Sbjct: 2 QDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKM-GEKSL 60
Query: 71 EFLEFLKLMATKMK-ENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELE 129
F EFL M E + EAFK FD++ G+IS ELRHV+ LGE+L+DE+++
Sbjct: 61 PFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVD 120
Query: 130 QMILEAD--SDGDGQVNYEEFARMML 153
++I D D +G V YE+F + ++
Sbjct: 121 EIIKLTDLQEDLEGNVKYEDFVKKVM 146
>pdb|1SCM|C Chain C, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 149
Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 80/146 (54%), Gaps = 6/146 (4%)
Query: 13 EDQIAEFQEAFSMLD-KDG-DGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTI 70
+D+I + ++ F + D DG DG + +L + L NP E++ + + G ++
Sbjct: 2 QDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKM-GEKSL 60
Query: 71 EFLEFLKLMATKMK-ENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELE 129
F EFL M E + EAFK FD++ G+IS ELRHV+ LGE+L+DE+++
Sbjct: 61 PFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVD 120
Query: 130 QMILEAD--SDGDGQVNYEEFARMML 153
++I D D +G V YE+F + ++
Sbjct: 121 EIIKLTDLQEDLEGNVKYEDFVKKVM 146
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 50/71 (70%)
Query: 11 LPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTI 70
+PED++ E +EAF + D+DG+G I+ +EL +A++SL P E EL +I +D+DG+G +
Sbjct: 30 IPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQV 89
Query: 71 EFLEFLKLMAT 81
+F EF+ L+
Sbjct: 90 DFEEFVTLLGP 100
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 44/63 (69%)
Query: 90 EELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEFA 149
EE++EAFKVFD+D +G+IS EL M +LG + ELE +I D DGDGQV++EEF
Sbjct: 36 EEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFV 95
Query: 150 RMM 152
++
Sbjct: 96 TLL 98
>pdb|1M8Q|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|T Chain T, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 145
Score = 67.0 bits (162), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 73/141 (51%), Gaps = 5/141 (3%)
Query: 13 EDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQ-NPTEEELRNMINEVDLDGNGTIE 71
E +I +F+EAF+++D++ DG I ++L ++ + N EEL MI E +G I
Sbjct: 3 ETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEA----SGPIN 58
Query: 72 FLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQM 131
F FL + K+K + ++ + AFKV D D G I + L ++ G + T EE++ M
Sbjct: 59 FTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNM 118
Query: 132 ILEADSDGDGQVNYEEFARMM 152
D G V+Y+ ++
Sbjct: 119 WAAFPPDVAGNVDYKNICYVI 139
>pdb|2W4T|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 136
Score = 67.0 bits (162), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 78/138 (56%), Gaps = 5/138 (3%)
Query: 15 QIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLE 74
QI E +EAFSM+D D DG ++ E++ + + L + P ++EL M+ E G + F
Sbjct: 2 QIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAP----GPLNFTM 57
Query: 75 FLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILE 134
FL + + K+ +++E ++ AF +FD+ + ++ ++ ++ N+G+ +E+ E
Sbjct: 58 FLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKE 117
Query: 135 ADSDGDGQVNYEEFARMM 152
A +G G+ +Y +F M+
Sbjct: 118 APVEG-GKFDYVKFTAMI 134
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 66.2 bits (160), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 56/87 (64%), Gaps = 3/87 (3%)
Query: 3 NNIYAEDV--LPEDQIAEFQEAFSMLDKDG-DGCITFEELASAIKSLDQNPTEEELRNMI 59
++IY V L E+Q EF+ AF + DG I+ +EL ++ L QNPT EEL+ MI
Sbjct: 2 DDIYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMI 61
Query: 60 NEVDLDGNGTIEFLEFLKLMATKMKEN 86
+EVD DG+GT++F EFL +M MK++
Sbjct: 62 DEVDEDGSGTVDFDEFLVMMVRSMKDD 88
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 87 EAQEELKEAFKVFD-KDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNY 145
E + E K AF +F +DG IS EL VM LG+ T EEL++MI E D DG G V++
Sbjct: 15 EQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDF 74
Query: 146 EEFARMMLLAV 156
+EF MM+ ++
Sbjct: 75 DEFLVMMVRSM 85
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 66.2 bits (160), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 56/87 (64%), Gaps = 3/87 (3%)
Query: 3 NNIYAEDV--LPEDQIAEFQEAFSMLDKDG-DGCITFEELASAIKSLDQNPTEEELRNMI 59
++IY V L E+Q EF+ AF + DG I+ +EL ++ L QNPT EEL+ MI
Sbjct: 2 DDIYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMI 61
Query: 60 NEVDLDGNGTIEFLEFLKLMATKMKEN 86
+EVD DG+GT++F EFL +M MK++
Sbjct: 62 DEVDEDGSGTVDFDEFLVMMVRSMKDD 88
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 87 EAQEELKEAFKVFD-KDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNY 145
E + E K AF +F +DG IS EL VM LG+ T EEL++MI E D DG G V++
Sbjct: 15 EQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDF 74
Query: 146 EEFARMMLLAV 156
+EF MM+ ++
Sbjct: 75 DEFLVMMVRSM 85
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
30 Structures
Length = 89
Score = 66.2 bits (160), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 2 SNNIYAEDV--LPEDQIAEFQEAFSMLDKDG-DGCITFEELASAIKSLDQNPTEEELRNM 58
+ +IY V L E+Q EF+ AF + DG I+ +EL ++ L QNPT EEL+ M
Sbjct: 1 AADIYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEM 60
Query: 59 INEVDLDGNGTIEFLEFLKLMATKMKEN 86
I+EVD DG+GT++F EFL +M MK++
Sbjct: 61 IDEVDEDGSGTVDFDEFLVMMVRSMKDD 88
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 87 EAQEELKEAFKVFD-KDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNY 145
E + E K AF +F +DG IS EL VM LG+ T EEL++MI E D DG G V++
Sbjct: 15 EQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDF 74
Query: 146 EEFARMML 153
+EF MM+
Sbjct: 75 DEFLVMMV 82
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 65.9 bits (159), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 80/148 (54%), Gaps = 6/148 (4%)
Query: 11 LPEDQIAEFQEAFSMLD-KDG-DGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNG 68
L +D+I + ++ F + DG DG + +L + L NP E++ + + G
Sbjct: 3 LSQDEIDDLKDVFELFAFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKM-GEK 61
Query: 69 TIEFLEFLKLMATKMK-ENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEE 127
++ F EFL M E + EAFK FD++ G+IS ELRHV+ LGE+L+DE+
Sbjct: 62 SLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDED 121
Query: 128 LEQMILEAD--SDGDGQVNYEEFARMML 153
++++I D D +G V YE+F + ++
Sbjct: 122 VDEIIKLTDLQEDLEGNVKYEDFVKKVM 149
>pdb|2EC6|B Chain B, Placopecten Striated Muscle Myosin Ii
Length = 133
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 73/135 (54%), Gaps = 5/135 (3%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E +EAF+M+D++ DG I +L SL + P ++EL M+ E G + F FL
Sbjct: 3 EMKEAFTMIDQNRDGFIDINDLKEEFSSLGRTPDDKELTAMLKEAP----GPLNFTMFLS 58
Query: 78 LMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADS 137
+ + K+ +++E ++ AF +FD+D ++ ++ ++ N+G+ +E+ EA
Sbjct: 59 IFSDKLSGTDSEETIRNAFGMFDEDATKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPV 118
Query: 138 DGDGQVNYEEFARMM 152
+G G+ +Y F M+
Sbjct: 119 EG-GKFDYVRFVAMI 132
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 90 EELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEF 148
+E+KEAF + D+++DG+I N+L+ +LG D+EL M+ EA G +N+ F
Sbjct: 2 QEMKEAFTMIDQNRDGFIDINDLKEEFSSLGRTPDDKELTAMLKEA----PGPLNFTMF 56
Score = 27.7 bits (60), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/76 (19%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 4 NIYAEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVD 63
+I+++ + D + AF M D+D + E + ++++ N ++E+R E
Sbjct: 58 SIFSDKLSGTDSEETIRNAFGMFDEDATKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAP 117
Query: 64 LDGNGTIEFLEFLKLM 79
++G G +++ F+ ++
Sbjct: 118 VEG-GKFDYVRFVAMI 132
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 75/146 (51%), Gaps = 14/146 (9%)
Query: 18 EFQEAFSMLDKDGDGCITFEEL-----------ASAIKSLDQNPTEEELRNMINEVDLDG 66
E + F LD +GDG + +EL + LD + E E+ +++ VD D
Sbjct: 315 ELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDR 374
Query: 67 NGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDE 126
NG IE+ EF+ + K + ++E L AF+ FD D G I+ EL + + E + DE
Sbjct: 375 NGYIEYSEFVTVCMDK-QLLLSRERLLAAFQQFDSDGSGKITNEELGR-LFGVTE-VDDE 431
Query: 127 ELEQMILEADSDGDGQVNYEEFARMM 152
Q++ E D + DG+V++EEF MM
Sbjct: 432 TWHQVLQECDKNNDGEVDFEEFVEMM 457
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 61/124 (49%), Gaps = 13/124 (10%)
Query: 39 LASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFL----KLMATK------MKENEA 88
+ S + +L++ +EL + ++D +G+G ++ E + KLM K + ++
Sbjct: 303 MGSKLTTLEET---KELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQI 359
Query: 89 QEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEF 148
+ E+ + D D++GYI +E V M+ L+ E L + DSDG G++ EE
Sbjct: 360 EAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEEL 419
Query: 149 ARMM 152
R+
Sbjct: 420 GRLF 423
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 75/146 (51%), Gaps = 14/146 (9%)
Query: 18 EFQEAFSMLDKDGDGCITFEEL-----------ASAIKSLDQNPTEEELRNMINEVDLDG 66
E + F LD +GDG + +EL + LD + E E+ +++ VD D
Sbjct: 41 ELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDR 100
Query: 67 NGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDE 126
NG IE+ EF+ + K + ++E L AF+ FD D G I+ EL + + E + DE
Sbjct: 101 NGYIEYSEFVTVCMDK-QLLLSRERLLAAFQQFDSDGSGKITNEELGR-LFGVTE-VDDE 157
Query: 127 ELEQMILEADSDGDGQVNYEEFARMM 152
Q++ E D + DG+V++EEF MM
Sbjct: 158 TWHQVLQECDKNNDGEVDFEEFVEMM 183
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 60/123 (48%), Gaps = 13/123 (10%)
Query: 39 LASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFL----KLMATK------MKENEA 88
+ S + +L++ EL + ++D +G+G ++ E + KLM K + ++
Sbjct: 29 MGSKLTTLEETK---ELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQI 85
Query: 89 QEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEF 148
+ E+ + D D++GYI +E V M+ L+ E L + DSDG G++ EE
Sbjct: 86 EAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEEL 145
Query: 149 ARM 151
R+
Sbjct: 146 GRL 148
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 82/155 (52%), Gaps = 13/155 (8%)
Query: 7 AEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSL--------DQNPTEEELRNM 58
A + +++ E + F +DK+GDG + +EL L D E E+ +
Sbjct: 336 ASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAI 395
Query: 59 INEVDLDGNGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMN 118
+ D D NG I++ EF+ + A K ++++L+ AF+ FD+D +G IS +EL V
Sbjct: 396 LGAADFDRNGYIDYSEFVTV-AMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASV--- 451
Query: 119 LG-EKLTDEELEQMILEADSDGDGQVNYEEFARMM 152
G + L + ++MI DS+ DG V++EEF +M+
Sbjct: 452 FGLDHLESKTWKEMISGIDSNNDGDVDFEEFCKMI 486
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
+ + AF D+DG+G I+ +ELAS LD ++ + MI+ +D + +G ++F EF K
Sbjct: 427 KLESAFQKFDQDGNGKISVDELASVF-GLDHLESKT-WKEMISGIDSNNDGDVDFEEFCK 484
Query: 78 LMATKMKENE 87
++ NE
Sbjct: 485 MIQKLCSNNE 494
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 53/109 (48%), Gaps = 7/109 (6%)
Query: 53 EELRNMINEVDLDGNGTIEFLEFLKLMATKMKENEA-------QEELKEAFKVFDKDQDG 105
+EL ++ +D +G+G ++ E + + E A + E+ D D++G
Sbjct: 346 KELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNG 405
Query: 106 YISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEFARMMLL 154
YI +E V M+ L+ ++LE + D DG+G+++ +E A + L
Sbjct: 406 YIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVFGL 454
Score = 33.9 bits (76), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 76 LKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNL-GEKLT-------DEE 127
L MA+K+ E +EL + F+ DK+ DG + EL L GE++ + E
Sbjct: 332 LLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESE 391
Query: 128 LEQMILEADSDGDGQVNYEEFARMML 153
++ ++ AD D +G ++Y EF + +
Sbjct: 392 VDAILGAADFDRNGYIDYSEFVTVAM 417
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 82/155 (52%), Gaps = 13/155 (8%)
Query: 7 AEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSL--------DQNPTEEELRNM 58
A + +++ E + F +DK+GDG + +EL L D E E+ +
Sbjct: 53 ASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAI 112
Query: 59 INEVDLDGNGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMN 118
+ D D NG I++ EF+ + A K ++++L+ AF+ FD+D +G IS +EL V
Sbjct: 113 LGAADFDRNGYIDYSEFVTV-AMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASV--- 168
Query: 119 LG-EKLTDEELEQMILEADSDGDGQVNYEEFARMM 152
G + L + ++MI DS+ DG V++EEF +M+
Sbjct: 169 FGLDHLESKTWKEMISGIDSNNDGDVDFEEFCKMI 203
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
+ + AF D+DG+G I+ +ELAS LD ++ + MI+ +D + +G ++F EF K
Sbjct: 144 KLESAFQKFDQDGNGKISVDELASVF-GLDHLESKT-WKEMISGIDSNNDGDVDFEEFCK 201
Query: 78 LMATKMKENEAQ 89
++ NE Q
Sbjct: 202 MIQKLCSNNEPQ 213
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 53/109 (48%), Gaps = 7/109 (6%)
Query: 53 EELRNMINEVDLDGNGTIEFLEFLKLMATKMKENEA-------QEELKEAFKVFDKDQDG 105
+EL ++ +D +G+G ++ E + + E A + E+ D D++G
Sbjct: 63 KELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNG 122
Query: 106 YISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEFARMMLL 154
YI +E V M+ L+ ++LE + D DG+G+++ +E A + L
Sbjct: 123 YIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVFGL 171
Score = 34.3 bits (77), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 76 LKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNL-GEKLT-------DEE 127
L MA+K+ E +EL + F+ DK+ DG + EL L GE++ + E
Sbjct: 49 LLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESE 108
Query: 128 LEQMILEADSDGDGQVNYEEFARMML 153
++ ++ AD D +G ++Y EF + +
Sbjct: 109 VDAILGAADFDRNGYIDYSEFVTVAM 134
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 48/64 (75%)
Query: 89 QEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEF 148
Q+EL+EAF+++DK+ +GYIS + +R ++ L E L+ E+L+ MI E D+DG G V++EEF
Sbjct: 2 QQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEF 61
Query: 149 ARMM 152
+M
Sbjct: 62 MGVM 65
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 43/63 (68%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E +EAF + DK+G+G I+ + + + LD+ + E+L MI+E+D DG+GT++F EF+
Sbjct: 4 ELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMG 63
Query: 78 LMA 80
+M
Sbjct: 64 VMT 66
>pdb|2W4A|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 150
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 73/141 (51%), Gaps = 5/141 (3%)
Query: 13 EDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQ-NPTEEELRNMINEVDLDGNGTIE 71
+ QI +F+EAF+++D++ DG I ++L ++ + N EEL MI E +G I
Sbjct: 8 QTQIQDFKEAFTVIDQNRDGIIDKDDLRETFAAMGRLNVKNEELDAMIKE----ASGPIN 63
Query: 72 FLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQM 131
F FL + K+K + ++ + AFKV D D G I + L ++ ++ T EE++ M
Sbjct: 64 FTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTQCDRFTPEEIKNM 123
Query: 132 ILEADSDGDGQVNYEEFARMM 152
D G V+Y+ ++
Sbjct: 124 WAAFPPDVAGNVDYKNICYVI 144
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 77/145 (53%), Gaps = 15/145 (10%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQ--------NPTEEELRNMINEVDLDGNGT 69
E + F LDK+GDG + +EL L EEE+ N++ EVD D NG
Sbjct: 356 ELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGY 415
Query: 70 IEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHV--MMNLGEKLTDEE 127
IE+ EF+ + K + ++E L+ AF +FD D+ G I+ EL ++ + ++ EK ++
Sbjct: 416 IEYSEFISVCMDK-QILFSEERLRRAFNLFDTDKSGKITKEELANLFGLTSISEKTWNDV 474
Query: 128 LEQMILEADSDGDGQVNYEEFARMM 152
L EAD + D ++++EF MM
Sbjct: 475 LG----EADQNKDNMIDFDEFVSMM 495
Score = 26.9 bits (58), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 5/100 (5%)
Query: 26 LDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLKLMA-TKMK 84
+D D +G I + E S +EE LR N D D +G I E L T +
Sbjct: 408 VDFDKNGYIEYSEFISVCMDKQILFSEERLRRAFNLFDTDKSGKITKEELANLFGLTSIS 467
Query: 85 ENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLT 124
E + L EA D+++D I +E +M + + T
Sbjct: 468 EKTWNDVLGEA----DQNKDNMIDFDEFVSMMHKICDHKT 503
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 49/68 (72%)
Query: 85 ENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVN 144
E +++EE+ +AF++FD D G I+ +LR V LGE LT+EEL++MI EAD + D +++
Sbjct: 4 ERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEID 63
Query: 145 YEEFARMM 152
+EF R+M
Sbjct: 64 EDEFIRIM 71
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 14 DQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFL 73
D E +AF + D D G IT ++L K L +N TEEEL+ MI E D + + I+
Sbjct: 6 DSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDED 65
Query: 74 EFLKLM 79
EF+++M
Sbjct: 66 EFIRIM 71
Score = 26.9 bits (58), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 48 QNPTEEELRNMINEVDLDGNGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYI 107
+ + EE+ D D +GTI + L+ +A ++ EN +EEL+E D++ D I
Sbjct: 4 ERDSREEILKAFRLFDDDNSGTITIKD-LRRVAKELGENLTEEELQEMIAEADRNDDNEI 62
Query: 108 SPNELRHVM 116
+E +M
Sbjct: 63 DEDEFIRIM 71
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 63.5 bits (153), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%)
Query: 11 LPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTI 70
L E+Q E +EAF + D DG G I +EL A+++L P +EE++ MI+E+D +G G +
Sbjct: 25 LTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKM 84
Query: 71 EFLEFLKLMATKM 83
F +FL +M KM
Sbjct: 85 NFGDFLTVMTQKM 97
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 42/66 (63%)
Query: 87 EAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYE 146
E ++E++EAF +FD D G I EL+ M LG + EE+++MI E D +G G++N+
Sbjct: 28 EQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFG 87
Query: 147 EFARMM 152
+F +M
Sbjct: 88 DFLTVM 93
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 77/145 (53%), Gaps = 5/145 (3%)
Query: 11 LPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTI 70
L + +I + F LD D G ++ +E+ +K + ++ ++ ++D + +G I
Sbjct: 51 LCDVEINNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQI 110
Query: 71 EFLEFLKLMATKMKENEAQEELKE-AFKVFDKDQDGYISPNELRHVMM--NLGEKLTDEE 127
+ +F L AT K+ ++E+ FK FD D +G IS EL+ + ++ L D+
Sbjct: 111 HYTDF--LAATIDKQTYLKKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPLIDKA 168
Query: 128 LEQMILEADSDGDGQVNYEEFARMM 152
++ ++ E D +GDG++++ EF MM
Sbjct: 169 IDSLLQEVDLNGDGEIDFHEFMLMM 193
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 23 FSMLDKDGDGCITFEELASAIKSLD-QNP-TEEELRNMINEVDLDGNGTIEFLEFLKLMA 80
F D DG+G I+ EEL D +NP ++ + +++ EVDL+G+G I+F EF+ +M+
Sbjct: 135 FKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMMS 194
Query: 81 TK 82
K
Sbjct: 195 KK 196
>pdb|3RV5|A Chain A, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|B Chain B, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|C Chain C, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|D Chain D, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
Length = 89
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 3/77 (3%)
Query: 3 NNIYAEDV--LPEDQIAEFQEAFSMLDKDG-DGCITFEELASAIKSLDQNPTEEELRNMI 59
++IY V L E+Q EF+ AF + DGCI+ +EL + L QNPT EEL+ I
Sbjct: 2 DDIYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVXRXLGQNPTPEELQEXI 61
Query: 60 NEVDLDGNGTIEFLEFL 76
+EVD DG+GT++F EFL
Sbjct: 62 DEVDEDGSGTVDFDEFL 78
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 87 EAQEELKEAFKVFD-KDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNY 145
E + E K AF +F +DG IS EL V LG+ T EEL++ I E D DG G V++
Sbjct: 15 EQKNEFKAAFDIFVLGAEDGCISTKELGKVXRXLGQNPTPEELQEXIDEVDEDGSGTVDF 74
Query: 146 EEF 148
+EF
Sbjct: 75 DEF 77
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 59.3 bits (142), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 90 EELKEAFKVFDKDQDGYISPNELRHVMMNL-GEKLTDEELEQMILEADSDGDGQVNYEEF 148
+EL++AF+ FD + DG IS +ELR M L G ++ ++E++I + D +GDG+V++EEF
Sbjct: 7 KELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEF 66
Query: 149 ARMM 152
RMM
Sbjct: 67 VRMM 70
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 16 IAEFQEAFSMLDKDGDGCITFEELASAIKSL-DQNPTEEELRNMINEVDLDGNGTIEFLE 74
+ E ++AF D +GDG I+ EL A++ L ++ +I +VDL+G+G ++F E
Sbjct: 6 VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 65
Query: 75 FLKLMA 80
F+++M+
Sbjct: 66 FVRMMS 71
>pdb|3I5G|C Chain C, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|C Chain C, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|C Chain C, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|C Chain C, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 159
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 78/150 (52%), Gaps = 9/150 (6%)
Query: 11 LPEDQIAEFQEAFSMLD-KDG-DGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNG 68
L +D+I E +E F + D DG DG + ++ ++ L NPTE ++ + G
Sbjct: 3 LTKDEIEEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQVHQHGGTKKM-GEK 61
Query: 69 TIEFLEFLKL---MATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTD 125
+ E L + M++K A +E EAFK FD++ G IS E+R+V+ LGE++T+
Sbjct: 62 AYKLEEILPIYEEMSSK-DTGTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERITE 120
Query: 126 EELEQMILEAD--SDGDGQVNYEEFARMML 153
++ + D D DG + YE+ + ++
Sbjct: 121 DQCNDIFTFCDIREDIDGNIKYEDLMKKVM 150
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 68 GTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNL---GEKLT 124
GT ++ F L+ K K + ++KE F++ DKDQ G+I EL+ V+ G L
Sbjct: 22 GTFDYKRFFHLVGLKGKTDA---QVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLN 78
Query: 125 DEELEQMILEADSDGDGQVNYEEFARMMLLA 155
D E + ++ DSD DG++ +EFA+M+ A
Sbjct: 79 DTETKALLAAGDSDHDGKIGADEFAKMVAQA 109
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 17 AEFQEAFSMLDKDGDGCITFEELASAIKSLDQNP---TEEELRNMINEVDLDGNGTIEFL 73
A+ +E F +LDKD G I EEL +K + + E + ++ D D +G I
Sbjct: 41 AQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGAD 100
Query: 74 EFLKLMA 80
EF K++A
Sbjct: 101 EFAKMVA 107
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 57/102 (55%), Gaps = 11/102 (10%)
Query: 23 FSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLKLMATK 82
F++ DKD +G I FEE + + + + EE+L DL+ +G I F E L ++A+
Sbjct: 69 FTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASV 128
Query: 83 MK---------ENEAQEEL--KEAFKVFDKDQDGYISPNELR 113
K E+EA E+ K+ FK+ DK++DGYI+ +E R
Sbjct: 129 YKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFR 170
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 72/147 (48%), Gaps = 16/147 (10%)
Query: 15 QIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEV-DLDGNGTIEFL 73
+I ++ + F L G + E+ K + E+ N + V D D NG I F
Sbjct: 26 EIQQWHKGF--LRDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFE 83
Query: 74 EFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMN----LGEKLT---DE 126
EF+ +++T + +E+L AF+++D + DGYI+ +E+ ++ + +G +T DE
Sbjct: 84 EFITVLSTTSR-GTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDE 142
Query: 127 ELEQMILEA-----DSDGDGQVNYEEF 148
+M ++ D + DG + +EF
Sbjct: 143 ATPEMRVKKIFKLMDKNEDGYITLDEF 169
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 70/133 (52%), Gaps = 6/133 (4%)
Query: 23 FSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLKLMATK 82
F +D +GDG +++EE+ + + E+ L+ + +D DGNG I+ EF K +
Sbjct: 6 FKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSI 65
Query: 83 MKENEAQEE--LKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGD 140
++ + ++ LK +K+ D D DG ++ E+ G E++ + +++AD++GD
Sbjct: 66 QGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGI----EKVAEQVMKADANGD 121
Query: 141 GQVNYEEFARMML 153
G + EEF L
Sbjct: 122 GYITLEEFLEFSL 134
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 70/133 (52%), Gaps = 6/133 (4%)
Query: 23 FSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLKLMATK 82
F +D +GDG +++EE+ + + E+ L+ + +D DGNG I+ EF K +
Sbjct: 6 FKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSI 65
Query: 83 MKENEAQEE--LKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGD 140
++ + ++ LK +K+ D D DG ++ E+ G E++ + +++AD++GD
Sbjct: 66 QGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHG----IEKVAEQVMKADANGD 121
Query: 141 GQVNYEEFARMML 153
G + EEF L
Sbjct: 122 GYITLEEFLEFSL 134
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 62/128 (48%), Gaps = 8/128 (6%)
Query: 22 AFSMLDKDGDGCITFEELASAIKSLDQNPTEE-ELRNMINEVDLDGNGTIEFLEFLKLMA 80
F +DKD G I+ EL A+ + P +R++I+ D + + F EF +
Sbjct: 31 VFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVW- 89
Query: 81 TKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGD 140
+ + + F+ +D+D G I NEL+ + G +L+D+ + +I + D G
Sbjct: 90 ------KYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGR 143
Query: 141 GQVNYEEF 148
GQ+ +++F
Sbjct: 144 GQIAFDDF 151
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 7/102 (6%)
Query: 16 IAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEF 75
I ++Q F D+D G I EL A+ +++ +I + D G G I F +F
Sbjct: 92 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 151
Query: 76 LKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMM 117
++ + L + F+ +D DQDG+I + +++ M
Sbjct: 152 IQGCI-------VLQRLTDIFRRYDTDQDGWIQVSYEQYLSM 186
Score = 29.6 bits (65), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Query: 89 QEELKEAFKVFDKDQDGYISPNELRHVMMN-LGEKLTDEELEQMILEADSDGDGQVNYEE 147
Q L F+ DKD+ G IS NEL+ + N + +I D + VN+ E
Sbjct: 25 QSFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSE 84
Query: 148 FA 149
F
Sbjct: 85 FT 86
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 62/128 (48%), Gaps = 8/128 (6%)
Query: 22 AFSMLDKDGDGCITFEELASAIKSLDQNPTEE-ELRNMINEVDLDGNGTIEFLEFLKLMA 80
F +DKD G I+ EL A+ + P +R++I+ D + + F EF +
Sbjct: 30 VFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVW- 88
Query: 81 TKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGD 140
+ + + F+ +D+D G I NEL+ + G +L+D+ + +I + D G
Sbjct: 89 ------KYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGR 142
Query: 141 GQVNYEEF 148
GQ+ +++F
Sbjct: 143 GQIAFDDF 150
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 7/102 (6%)
Query: 16 IAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEF 75
I ++Q F D+D G I EL A+ +++ +I + D G G I F +F
Sbjct: 91 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 150
Query: 76 LKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMM 117
++ + L + F+ +D DQDG+I + +++ M
Sbjct: 151 IQGCI-------VLQRLTDIFRRYDTDQDGWIQVSYEQYLSM 185
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 49/67 (73%)
Query: 86 NEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNY 145
+++EEL + F++FDK+ DGYI +EL+ ++ GE +T++++E+++ + D + DG+++Y
Sbjct: 2 GKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDY 61
Query: 146 EEFARMM 152
+EF M
Sbjct: 62 DEFLEFM 68
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E + F M DK+ DG I +EL +++ + TE+++ ++ + D + +G I++ EFL+
Sbjct: 7 ELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 66
Query: 78 LM 79
M
Sbjct: 67 FM 68
Score = 29.3 bits (64), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 49 NPTEEELRNMINEVDLDGNGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYIS 108
+EEEL ++ D + +G I+ L+ LK+M E +++++E K DK+ DG I
Sbjct: 2 GKSEEELSDLFRMFDKNADGYID-LDELKIMLQATGETITEDDIEELMKDGDKNNDGRID 60
Query: 109 PNELRHVM 116
+E M
Sbjct: 61 YDEFLEFM 68
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 62/128 (48%), Gaps = 8/128 (6%)
Query: 22 AFSMLDKDGDGCITFEELASAIKSLDQNPTEE-ELRNMINEVDLDGNGTIEFLEFLKLMA 80
F +DKD G I+ EL A+ + P +R++I+ D + + F EF +
Sbjct: 9 VFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVW- 67
Query: 81 TKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGD 140
+ + + F+ +D+D G I NEL+ + G +L+D+ + +I + D G
Sbjct: 68 ------KYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGR 121
Query: 141 GQVNYEEF 148
GQ+ +++F
Sbjct: 122 GQIAFDDF 129
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 7/102 (6%)
Query: 16 IAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEF 75
I ++Q F D+D G I EL A+ +++ +I + D G G I F +F
Sbjct: 70 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 129
Query: 76 LKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMM 117
++ + L + F+ +D DQDG+I + +++ M
Sbjct: 130 IQGCI-------VLQRLTDIFRRYDTDQDGWIQVSYEQYLSM 164
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 62/128 (48%), Gaps = 8/128 (6%)
Query: 22 AFSMLDKDGDGCITFEELASAIKSLDQNPTEE-ELRNMINEVDLDGNGTIEFLEFLKLMA 80
F +DKD G I+ EL A+ + P +R++I+ D + + F EF +
Sbjct: 12 VFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVW- 70
Query: 81 TKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGD 140
+ + + F+ +D+D G I NEL+ + G +L+D+ + +I + D G
Sbjct: 71 ------KYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGR 124
Query: 141 GQVNYEEF 148
GQ+ +++F
Sbjct: 125 GQIAFDDF 132
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 7/102 (6%)
Query: 16 IAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEF 75
I ++Q F D+D G I EL A+ +++ +I + D G G I F +F
Sbjct: 73 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 132
Query: 76 LKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMM 117
++ + L + F+ +D DQDG+I + +++ M
Sbjct: 133 IQGCI-------VLQRLTDIFRRYDTDQDGWIQVSYEQYLSM 167
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 62/128 (48%), Gaps = 8/128 (6%)
Query: 22 AFSMLDKDGDGCITFEELASAIKSLDQNPTEE-ELRNMINEVDLDGNGTIEFLEFLKLMA 80
F +DKD G I+ EL A+ + P +R++I+ D + + F EF +
Sbjct: 8 VFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVW- 66
Query: 81 TKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGD 140
+ + + F+ +D+D G I NEL+ + G +L+D+ + +I + D G
Sbjct: 67 ------KYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGR 120
Query: 141 GQVNYEEF 148
GQ+ +++F
Sbjct: 121 GQIAFDDF 128
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 7/102 (6%)
Query: 16 IAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEF 75
I ++Q F D+D G I EL A+ +++ +I + D G G I F +F
Sbjct: 69 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 128
Query: 76 LKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMM 117
++ + L + F+ +D DQDG+I + +++ M
Sbjct: 129 IQGCI-------VLQRLTDIFRRYDTDQDGWIQVSYEQYLSM 163
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 86/171 (50%), Gaps = 25/171 (14%)
Query: 3 NNIYAEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEV 62
++I E + + F LD++ G ++ +L I +L NP + + I
Sbjct: 15 DSIRRETGFSQASLLRLHHRFRALDRNKKGYLSRMDLQQ-IGALAVNPLGDRI---IESF 70
Query: 63 DLDGNGTIEFLEFLKLMA--------------TKMKE--NEAQEELKEAFKVFDKDQDGY 106
DG+ ++F F++++A K E N + +L AF+++D D+DG
Sbjct: 71 FPDGSQRVDFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGK 130
Query: 107 ISPNELRHVM-MNLGEKLTDEELE----QMILEADSDGDGQVNYEEFARMM 152
IS +E+ V+ + +G ++T+E+LE + + EAD DGDG V++ EF + +
Sbjct: 131 ISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSL 181
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 47/65 (72%)
Query: 88 AQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEE 147
++EEL + F++FDK+ DGYI EL+ ++ GE +T++++E+++ + D + DG+++Y+E
Sbjct: 3 SEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 62
Query: 148 FARMM 152
F M
Sbjct: 63 FLEFM 67
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 37/62 (59%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E + F M DK+ DG I EEL +++ + TE+++ ++ + D + +G I++ EFL+
Sbjct: 6 ELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 65
Query: 78 LM 79
M
Sbjct: 66 FM 67
Score = 30.0 bits (66), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 50 PTEEELRNMINEVDLDGNGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISP 109
+EEEL ++ D + +G I+ LE LK+M E +++++E K DK+ DG I
Sbjct: 2 KSEEELSDLFRMFDKNADGYID-LEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDY 60
Query: 110 NELRHVM 116
+E M
Sbjct: 61 DEFLEFM 67
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 62/128 (48%), Gaps = 8/128 (6%)
Query: 22 AFSMLDKDGDGCITFEELASAIKSLDQNPTEE-ELRNMINEVDLDGNGTIEFLEFLKLMA 80
F +DKD G I+ EL A+ + P +R++I+ D + + F EF +
Sbjct: 12 VFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVW- 70
Query: 81 TKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGD 140
+ + + F+ +D+D G I NEL+ + G +L+D+ + +I + D G
Sbjct: 71 ------KYITDWQNVFRTYDRDNSGMIDKNELKQALSGAGYRLSDQFHDILIRKFDRQGR 124
Query: 141 GQVNYEEF 148
GQ+ +++F
Sbjct: 125 GQIAFDDF 132
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 7/102 (6%)
Query: 16 IAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEF 75
I ++Q F D+D G I EL A+ +++ +I + D G G I F +F
Sbjct: 73 ITDWQNVFRTYDRDNSGMIDKNELKQALSGAGYRLSDQFHDILIRKFDRQGRGQIAFDDF 132
Query: 76 LKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMM 117
++ + L + F+ +D DQDG+I + +++ M
Sbjct: 133 IQGCI-------VLQRLTDIFRRYDTDQDGWIQVSYEQYLSM 167
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 47/66 (71%)
Query: 87 EAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYE 146
+++EEL F++FDK+ DG+I EL ++ GE + +E++E ++ ++D + DG+++++
Sbjct: 7 KSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFD 66
Query: 147 EFARMM 152
EF +MM
Sbjct: 67 EFLKMM 72
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 38/62 (61%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E F + DK+ DG I EEL +++ ++ EE++ +++ + D + +G I+F EFLK
Sbjct: 11 ELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLK 70
Query: 78 LM 79
+M
Sbjct: 71 MM 72
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 49/68 (72%)
Query: 85 ENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVN 144
+ +++EEL + F++FDK+ DGYI EL+ ++ GE +T++++E+++ + D + DG+++
Sbjct: 2 KGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRID 61
Query: 145 YEEFARMM 152
Y+EF M
Sbjct: 62 YDEFLEFM 69
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 37/62 (59%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E + F M DK+ DG I EEL +++ + TE+++ ++ + D + +G I++ EFL+
Sbjct: 8 ELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 67
Query: 78 LM 79
M
Sbjct: 68 FM 69
Score = 30.8 bits (68), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 48 QNPTEEELRNMINEVDLDGNGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYI 107
+ +EEEL ++ D + +G I+ LE LK+M E +++++E K DK+ DG I
Sbjct: 2 KGKSEEELSDLFRMFDKNADGYID-LEELKIMLQATGETITEDDIEELMKDGDKNNDGRI 60
Query: 108 SPNELRHVM 116
+E M
Sbjct: 61 DYDEFLEFM 69
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 48/68 (70%)
Query: 85 ENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVN 144
+ + +EEL + F++FDK+ DGYI EL+ ++ GE +T++++E+++ + D + DG+++
Sbjct: 10 KGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRID 69
Query: 145 YEEFARMM 152
Y+EF M
Sbjct: 70 YDEFLEFM 77
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 37/62 (59%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E + F M DK+ DG I EEL +++ + TE+++ ++ + D + +G I++ EFL+
Sbjct: 16 ELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 75
Query: 78 LM 79
M
Sbjct: 76 FM 77
Score = 33.5 bits (75), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 39 LASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLKLMATKMKENEAQEELKEAFKV 98
+ +K + TEEEL ++ D + +G I+ LE LK+M E +++++E K
Sbjct: 1 MVRCMKDDSKGKTEEELSDLFRMFDKNADGYID-LEELKIMLQATGETITEDDIEELMKD 59
Query: 99 FDKDQDGYISPNELRHVM 116
DK+ DG I +E M
Sbjct: 60 GDKNNDGRIDYDEFLEFM 77
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 48/68 (70%)
Query: 85 ENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVN 144
+ + +EEL + F++FDK+ DGYI EL+ ++ GE +T++++E+++ + D + DG+++
Sbjct: 5 KGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRID 64
Query: 145 YEEFARMM 152
Y+EF M
Sbjct: 65 YDEFLEFM 72
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 37/62 (59%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
E + F M DK+ DG I EEL +++ + TE+++ ++ + D + +G I++ EFL+
Sbjct: 11 ELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 70
Query: 78 LM 79
M
Sbjct: 71 FM 72
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 48 QNPTEEELRNMINEVDLDGNGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYI 107
+ TEEEL ++ D + +G I+ LE LK+M E +++++E K DK+ DG I
Sbjct: 5 KGKTEEELSDLFRMFDKNADGYID-LEELKIMLQATGETITEDDIEELMKDGDKNNDGRI 63
Query: 108 SPNELRHVM 116
+E M
Sbjct: 64 DYDEFLEFM 72
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 80/168 (47%), Gaps = 24/168 (14%)
Query: 5 IYAEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDL 64
I E QI F+ LDK +G ++ E+ I L NP + + IN
Sbjct: 17 IKKETGFSHSQITRLYSRFTSLDKGENGTLSREDF-QRIPELAINPLGDRI---INAFFS 72
Query: 65 DGNGTIEFLEFLKLMAT--------KMKE-------NEAQEELKEAFKVFDKDQDGYISP 109
+G + F F++ +A K K+ N +L AF+++D D+D IS
Sbjct: 73 EGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISR 132
Query: 110 NELRHVM-MNLGEKLTDEEL----EQMILEADSDGDGQVNYEEFARMM 152
+EL V+ M +G ++DE+L ++ I EAD DGD +++ EF +++
Sbjct: 133 DELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVL 180
>pdb|2FCE|A Chain A, Solution Structure Of C-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 70
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 44/59 (74%)
Query: 90 EELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEF 148
E+ +AF+VFDK+ G +S +LR+++ LGEKLTD E+++++ + D +G+++Y++F
Sbjct: 5 EDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKF 63
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 35/59 (59%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFL 76
+F +AF + DK+ G ++ +L + L + T+ E+ ++ V++D NG I++ +F+
Sbjct: 6 DFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFI 64
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 80/168 (47%), Gaps = 24/168 (14%)
Query: 5 IYAEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDL 64
I E QI F+ LDK +G ++ E+ I L NP + + IN
Sbjct: 17 IKKETGFSHSQITRLYSRFTSLDKGENGTLSREDF-QRIPELAINPLGDRI---INAFFP 72
Query: 65 DGNGTIEFLEFLKLMAT--------KMKE-------NEAQEELKEAFKVFDKDQDGYISP 109
+G + F F++ +A K K+ N +L AF+++D D+D IS
Sbjct: 73 EGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDEKISR 132
Query: 110 NELRHVM-MNLGEKLTDEEL----EQMILEADSDGDGQVNYEEFARMM 152
+EL V+ M +G ++DE+L ++ I EAD DGD +++ EF +++
Sbjct: 133 DELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVL 180
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium
Regulatory Domain (Cld) From Soybean Calcium-Dependent
Protein Kinase- Alpha (Cdpk)
Length = 87
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 42/66 (63%)
Query: 11 LPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTI 70
L E++I +E F M+D D G ITF+EL +K + E E++++++ D+D +GTI
Sbjct: 17 LSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTI 76
Query: 71 EFLEFL 76
++ EF+
Sbjct: 77 DYGEFI 82
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 77 KLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEAD 136
K MA ++ E E LKE FK+ D D G I+ +EL+ + +G +L + E++ ++ AD
Sbjct: 11 KHMAERLSEEEIGG-LKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAAD 69
Query: 137 SDGDGQVNYEEF 148
D G ++Y EF
Sbjct: 70 IDKSGTIDYGEF 81
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%)
Query: 11 LPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTI 70
L E+Q E +EAF + D + G I + EL A+++L + + E+ ++NE D +GNG I
Sbjct: 1 LSEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYI 60
Query: 71 EFLEFLKLMATKMK 84
F +FL +M K+K
Sbjct: 61 GFDDFLDIMTEKIK 74
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 42/66 (63%)
Query: 87 EAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYE 146
E ++E+KEAF +FD ++ G I +EL+ M LG + E+ +++ E D +G+G + ++
Sbjct: 4 EQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFD 63
Query: 147 EFARMM 152
+F +M
Sbjct: 64 DFLDIM 69
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 73/151 (48%), Gaps = 19/151 (12%)
Query: 17 AEFQEAFS-MLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEF 75
A+ QE + L++ G + E K D + + M D +G+ TI+FLE+
Sbjct: 22 AQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEY 81
Query: 76 LKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNL---------------- 119
+ + ++ + +LK FK++DKD++G I EL ++ ++
Sbjct: 82 VAALNLVLR-GTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQ 140
Query: 120 GEKLTDEE-LEQMILEADSDGDGQVNYEEFA 149
G+ LT EE ++++ L D +GDGQ++ EF
Sbjct: 141 GKLLTPEEVVDRIFLLVDENGDGQLSLNEFV 171
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 52.8 bits (125), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 89 QEELKEAFKVFDKDQDGYISPNELRHVMMNLGEK-LTDEELEQMILEADSDGDGQVNYEE 147
+EE+ AFKVFD + DG I +E + +M +GE+ LTD E+E+ + EAD DG+G ++ E
Sbjct: 7 EEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPE 66
Query: 148 FARMM 152
F ++
Sbjct: 67 FMDLI 71
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNP-TEEELRNMINEVDLDGNGTIEFLEFL 76
E AF + D +GDG I F+E ++ + + P T+ E+ + E D DGNG I+ EF+
Sbjct: 9 EILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFM 68
Query: 77 KLM 79
L+
Sbjct: 69 DLI 71
Score = 29.3 bits (64), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%)
Query: 52 EEELRNMINEVDLDGNGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNE 111
EEE+ D +G+G I+F EF +M +E E++EA K D+D +G I E
Sbjct: 7 EEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPE 66
Query: 112 L 112
Sbjct: 67 F 67
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 52.4 bits (124), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 44/70 (62%)
Query: 10 VLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGT 69
VL ++ E++EAF + DKD D +T EEL + +++L NPT++++ ++ + D D +G
Sbjct: 7 VLTAEEQQEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGK 66
Query: 70 IEFLEFLKLM 79
+ FL +M
Sbjct: 67 FDQETFLTIM 76
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%)
Query: 87 EAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYE 146
E Q+E KEAF++FDKD D ++ EL VM LG T +++ +++ + D D G+ + E
Sbjct: 11 EEQQEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGKFDQE 70
Query: 147 EFARMML 153
F +ML
Sbjct: 71 TFLTIML 77
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
Length = 191
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 70/155 (45%), Gaps = 7/155 (4%)
Query: 2 SNNIYAEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINE 61
S +YA + E E F +D DG G I+ EL +A+ S + +++
Sbjct: 12 STGVYAPSARHMNDNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHM 71
Query: 62 VDLDGNGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGE 121
D + +G I F EF L + ++E F+ D DG + NE+R +++ G
Sbjct: 72 YDKNHSGEITFDEFKDLHHFIL-------SMREGFRKRDSSGDGRLDSNEVRAALLSSGY 124
Query: 122 KLTDEELEQMILEADSDGDGQVNYEEFARMMLLAV 156
+++++ + ++ + D G + ++++ + +
Sbjct: 125 QVSEQTFQALMRKFDRQRRGSLGFDDYVELSIFVC 159
>pdb|3AAJ|A Chain A, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
pdb|3AAJ|B Chain B, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
Length = 167
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 62/128 (48%), Gaps = 10/128 (7%)
Query: 22 AFSMLDKDGDGCITFEELASAIKSLDQNPTEE-ELRNMINEVDLDGNGTIEFLEFLKLMA 80
F +DKD G I+ EL A+ + P +R++I+ D + + F EF +
Sbjct: 9 VFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVW- 67
Query: 81 TKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGD 140
+ + + F+ +D+D G I NEL+ + G +L+D+ + +I + D G
Sbjct: 68 ------KYITDWQNVFRTYDRDNSGMIDKNELKQALS--GYRLSDQFHDILIRKFDRQGR 119
Query: 141 GQVNYEEF 148
GQ+ +++F
Sbjct: 120 GQIAFDDF 127
Score = 39.3 bits (90), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 9/102 (8%)
Query: 16 IAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEF 75
I ++Q F D+D G I EL A+ + ++ +I + D G G I F +F
Sbjct: 70 ITDWQNVFRTYDRDNSGMIDKNELKQALSGYRLSDQFHDI--LIRKFDRQGRGQIAFDDF 127
Query: 76 LKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMM 117
++ + L + F+ +D DQDG+I + +++ M
Sbjct: 128 IQGCI-------VLQRLTDIFRRYDTDQDGWIQVSYEQYLSM 162
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 11/135 (8%)
Query: 23 FSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLKLMATK 82
F LD+DG + +E + L + E + + D +G+GT++ EFL+ +
Sbjct: 43 FRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPP 102
Query: 83 MKENEAQEE-LKEAFKVFDKDQDGYISPNELR-------HVMMNLGEKLTDEELEQMILE 134
M ++A+E + AF D+ DG ++ ++LR H + GE DE L + +
Sbjct: 103 M--SQAREAVIAAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLRRFLDN 160
Query: 135 AD-SDGDGQVNYEEF 148
D S+ DGQV EF
Sbjct: 161 FDSSEKDGQVTLAEF 175
Score = 32.7 bits (73), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 29/61 (47%)
Query: 92 LKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEFARM 151
L F+ D+D + +E R + LG L E E + + D +G G ++ EEF R
Sbjct: 39 LARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRA 98
Query: 152 M 152
+
Sbjct: 99 L 99
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 13/83 (15%)
Query: 17 AEFQEAFSMLDKDGDGCITFEELASAIKSLDQNP-------TEEE-LRNMINEVDL---D 65
A AF+ LD+ GDG +T ++L + S +P TE+E LR ++ D D
Sbjct: 109 AVIAAAFAKLDRSGDGVVTVDDL-RGVYSGRAHPKVRSGEWTEDEVLRRFLDNFDSSEKD 167
Query: 66 GNGTI-EFLEFLKLMATKMKENE 87
G T+ EF ++ ++ M +E
Sbjct: 168 GQVTLAEFQDYYSGVSASMNTDE 190
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 3/69 (4%)
Query: 7 AEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDG 66
AED P+D IA+ + F D +GDG I+ EL A+K+L + T +E+R M+ E+D DG
Sbjct: 3 AEDT-PQD-IADRERIFKRFDTNGDGKISSSELGDALKTL-GSVTPDEVRRMMAEIDTDG 59
Query: 67 NGTIEFLEF 75
+G I F EF
Sbjct: 60 DGFISFDEF 68
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 96 FKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEFA 149
FK FD + DG IS +EL + LG +T +E+ +M+ E D+DGDG ++++EF
Sbjct: 17 FKRFDTNGDGKISSSELGDALKTLGS-VTPDEVRRMMAEIDTDGDGFISFDEFT 69
>pdb|2PVB|A Chain A, Pike Parvalbumin (Pi 4.10) At Low Temperature (100k) And
Atomic Resolution (0.91 A).
pdb|3PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PVB|A Chain A, X-Ray Structure Of A New Crystal Form Of Pike 4.10
Parvalbumin
pdb|2PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|4PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
Length = 108
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 86 NEAQEELKEAFKVFDKDQDGYISPNELRHVMMNL---GEKLTDEELEQMILEADSDGDGQ 142
+++ +++K+AF V D+D+ G+I +EL+ + N LTD E + + + D DGDG
Sbjct: 37 SKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGM 96
Query: 143 VNYEEFARMM 152
+ +EFA M+
Sbjct: 97 IGVDEFAAMI 106
Score = 26.6 bits (57), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 5 IYAEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNP---TEEELRNMINE 61
+A+ L + + ++AF ++D+D G I +EL +++ + T+ E + + +
Sbjct: 29 FFAKVGLASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLAD 88
Query: 62 VDLDGNGTIEFLEFLKLM 79
D DG+G I EF ++
Sbjct: 89 GDKDGDGMIGVDEFAAMI 106
>pdb|2KYC|A Chain A, Solution Structure Of Ca-Free Chicken Parvalbumin 3 (Cpv3)
pdb|2KYF|A Chain A, Solution Structure Of Calcium-Bound Cpv3
Length = 108
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 86 NEAQEELKEAFKVFDKDQDGYISPNELRHVMMNL---GEKLTDEELEQMILEADSDGDGQ 142
++ +LKE F++ D DQ G+I +EL++ + LT E + + AD DGDG+
Sbjct: 37 KKSSSQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTFLAAADHDGDGK 96
Query: 143 VNYEEFARMM 152
+ EEF M+
Sbjct: 97 IGAEEFQEMV 106
Score = 25.8 bits (55), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 17 AEFQEAFSMLDKDGDGCITFEELASAIKSLDQNP---TEEELRNMINEVDLDGNGTIEFL 73
++ +E F +LD D G I +EL ++ + T E + + D DG+G I
Sbjct: 41 SQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTFLAAADHDGDGKIGAE 100
Query: 74 EFLKLMAT 81
EF +++ +
Sbjct: 101 EFQEMVQS 108
>pdb|2K7B|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 N-Domain
Length = 76
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 45/73 (61%)
Query: 11 LPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTI 70
L ++I E +EAF DKD DG I +L + ++++ PTE EL + +++++ G +
Sbjct: 4 LRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHV 63
Query: 71 EFLEFLKLMATKM 83
+F +F++LM K+
Sbjct: 64 DFDDFVELMGPKL 76
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 42/63 (66%)
Query: 90 EELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEFA 149
EEL+EAF+ FDKD+DGYI+ +L + M +G T+ EL ++ + + + G V++++F
Sbjct: 10 EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFV 69
Query: 150 RMM 152
+M
Sbjct: 70 ELM 72
>pdb|1CDP|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
pdb|4CPV|A Chain A, Refined Crystal Structure Of Calcium-Liganded Carp
Parvalbumin 4.25 At 1.5-Angstroms Resolution
pdb|5CPV|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
Length = 109
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 86 NEAQEELKEAFKVFDKDQDGYISPNELRHVMMNL---GEKLTDEELEQMILEADSDGDGQ 142
+++ +++K+AF + D+D+ G+I +EL+ + N LTD E + + DSDGDG+
Sbjct: 38 SKSADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGK 97
Query: 143 VNYEEFARMM 152
+ +EF ++
Sbjct: 98 IGVDEFTALV 107
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 5 IYAEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNP---TEEELRNMINE 61
+A+ L + ++AF+++D+D G I +EL +++ + T+ E + +
Sbjct: 30 FFAKVGLTSKSADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKA 89
Query: 62 VDLDGNGTIEFLEFLKLM 79
D DG+G I EF L+
Sbjct: 90 GDSDGDGKIGVDEFTALV 107
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Query: 12 PEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIE 71
P+D+ AE + F D +GDG I+ EL A+K+L + T +E+++M+ E+D DG+G I
Sbjct: 5 PQDK-AERERIFKRFDANGDGKISAAELGEALKTL-GSITPDEVKHMMAEIDTDGDGFIS 62
Query: 72 FLEF 75
F EF
Sbjct: 63 FQEF 66
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 89 QEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEF 148
+ E + FK FD + DG IS EL + LG +T +E++ M+ E D+DGDG ++++EF
Sbjct: 8 KAERERIFKRFDANGDGKISAAELGEALKTLGS-ITPDEVKHMMAEIDTDGDGFISFQEF 66
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 58/106 (54%), Gaps = 13/106 (12%)
Query: 57 NMINEVDLDGNGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVM 116
++ D +G+GTI+F EF+ ++ + + +++LK AF ++D D +GYIS E+ ++
Sbjct: 67 HVFRTFDANGDGTIDFREFIIALSVTSR-GKLEQKLKWAFSMYDLDGNGYISKAEMLEIV 125
Query: 117 ------------MNLGEKLTDEELEQMILEADSDGDGQVNYEEFAR 150
M E ++ E++ + D++ DG+++ EEF R
Sbjct: 126 QAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIR 171
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 13/122 (10%)
Query: 3 NNIYAEDVLPEDQIAEFQE-AFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINE 61
IY + P ++F E F D +GDG I F E A+ + E++L+ +
Sbjct: 49 KKIYG-NFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSM 107
Query: 62 VDLDGNGTIEFLEFLKLM---------ATKMKENEAQEELK--EAFKVFDKDQDGYISPN 110
DLDGNG I E L+++ KM E+E+ E + + F+ D ++DG +S
Sbjct: 108 YDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLE 167
Query: 111 EL 112
E
Sbjct: 168 EF 169
Score = 27.7 bits (60), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/63 (23%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 88 AQEELKEAFKVFDKD-QDGYISPNELRHVMMNLGEKLTDEELEQMILEA-DSDGDGQVNY 145
+ E++E +K F +D G++S E + + N + + + D++GDG +++
Sbjct: 23 TEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDF 82
Query: 146 EEF 148
EF
Sbjct: 83 REF 85
>pdb|1S3P|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin S55d/e59d
Mutant
Length = 109
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 48/82 (58%), Gaps = 6/82 (7%)
Query: 74 EFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNL---GEKLTDEELEQ 130
+F +++ K K + +++K+ F + DKD+DG+I +EL ++ L+ +E +
Sbjct: 28 KFFQMVGLKKK---SADDVKKVFHILDKDKDGFIDEDELGSILKGFSSDARDLSAKETKT 84
Query: 131 MILEADSDGDGQVNYEEFARMM 152
++ D DGDG++ EEF+ ++
Sbjct: 85 LMAAGDKDGDGKIGVEEFSTLV 106
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 20 QEAFSMLDKDGDGCITFEELASAIKSLDQNP---TEEELRNMINEVDLDGNGTIEFLEFL 76
++ F +LDKD DG I +EL S +K + + +E + ++ D DG+G I EF
Sbjct: 44 KKVFHILDKDKDGFIDEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFS 103
Query: 77 KLMA 80
L+A
Sbjct: 104 TLVA 107
>pdb|1B8R|A Chain A, Parvalbumin
Length = 108
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 86 NEAQEELKEAFKVFDKDQDGYISPNELRHVMMNL---GEKLTDEELEQMILEADSDGDGQ 142
+++ +++K+AF + D+D+ G+I +EL+ + N LTD E + + DSDGDG+
Sbjct: 37 SKSADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGK 96
Query: 143 VNYEEFARMM 152
+ +E+ ++
Sbjct: 97 IGVDEWTALV 106
Score = 26.2 bits (56), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 5 IYAEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNP---TEEELRNMINE 61
+A+ L + ++AF+++D+D G I +EL +++ + T+ E + +
Sbjct: 29 FFAKVGLTSKSADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKA 88
Query: 62 VDLDGNGTIEFLEFLKLM 79
D DG+G I E+ L+
Sbjct: 89 GDSDGDGKIGVDEWTALV 106
>pdb|3PAT|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|2PAS|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|1PVA|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
pdb|1PVA|B Chain B, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
Length = 110
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 68 GTIEFLEFLKLMATK-MKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNL---GEKL 123
G+ +F L+ K M N+ +K+ FK D D G+I EL+ V+ + G L
Sbjct: 23 GSFNHKKFFALVGLKAMSAND----VKKVFKAIDADASGFIEEEELKFVLKSFAADGRDL 78
Query: 124 TDEELEQMILEADSDGDGQVNYEEF 148
TD E + + AD DGDG++ +EF
Sbjct: 79 TDAETKAFLKAADKDGDGKIGIDEF 103
Score = 30.0 bits (66), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 20 QEAFSMLDKDGDGCITFEELASAIKSL---DQNPTEEELRNMINEVDLDGNGTIEFLEFL 76
++ F +D D G I EEL +KS ++ T+ E + + D DG+G I EF
Sbjct: 45 KKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFE 104
Query: 77 KLM 79
L+
Sbjct: 105 TLV 107
>pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239
Length = 180
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 70/148 (47%), Gaps = 14/148 (9%)
Query: 14 DQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFL 73
+ I E F LD + +G ++ E+ + + S+ + ++ ++ +D++ G I +
Sbjct: 36 NHIKYINELFYKLDTNHNGSLSHREIYTVLASV--GIKKWDINRILQALDINDRGNITYT 93
Query: 74 EFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMIL 133
EF+ +N LK AF DKD+DGYIS +++ V + + L + +++ L
Sbjct: 94 EFMA--GCYRWKNIESTFLKAAFNKIDKDEDGYISKSDI--VSLVHDKVLDNNDIDNFFL 149
Query: 134 EADSDGDG--------QVNYEEFARMML 153
S G +++++EF ML
Sbjct: 150 SVHSIKKGIPREHIINKISFQEFKDYML 177
>pdb|2EHB|A Chain A, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 207
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 54/94 (57%), Gaps = 8/94 (8%)
Query: 63 DLDGNGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEK 122
D+ NG IEF EF++ + E++K AFK++D Q G+I EL+ +++ L +
Sbjct: 84 DVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHE 143
Query: 123 ----LTDEELEQMI----LEADSDGDGQVNYEEF 148
L+++ +E M+ ++AD DG+++ +E+
Sbjct: 144 SELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEW 177
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 13/103 (12%)
Query: 58 MINEVDLDGNGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNEL----- 112
+ N D DGNG I F +F+ ++ ++ E+LK AF ++D ++DG I+ E+
Sbjct: 134 LFNAFDADGNGAIHFEDFVVGLSILLR-GTVHEKLKWAFNLYDINKDGCITKEEMLAIMK 192
Query: 113 -------RHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEF 148
RH L E E +E+ + D + DG V +EF
Sbjct: 193 SIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEF 235
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 11/119 (9%)
Query: 5 IYAEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDL 64
IY++ D F+ D DG+G I FE+ + L + E+L+ N D+
Sbjct: 117 IYSQFFPQGDATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDI 176
Query: 65 DGNGTIEFLEFLKLMAT-----------KMKENEAQEELKEAFKVFDKDQDGYISPNEL 112
+ +G I E L +M + ++E+ E ++ F+ D++QDG ++ +E
Sbjct: 177 NKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEF 235
>pdb|1V1F|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) And Manganese(Ii) Ions
pdb|1V1G|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) Ion
Length = 222
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 54/94 (57%), Gaps = 8/94 (8%)
Query: 63 DLDGNGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEK 122
D+ NG IEF EF++ + E++K AFK++D Q G+I EL+ +++ L +
Sbjct: 84 DVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHE 143
Query: 123 ----LTDEELEQMI----LEADSDGDGQVNYEEF 148
L+++ +E M+ ++AD DG+++ +E+
Sbjct: 144 SELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEW 177
>pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin (Oncomodulin)
Refined With A Paramagnetism Based Strategy
Length = 109
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 81 TKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNL---GEKLTDEELEQMILEADS 137
+KM N+ +K+ F+ D DQ GY+ EL+ + +LT+ E + ++ AD+
Sbjct: 37 SKMSANQ----VKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADN 92
Query: 138 DGDGQVNYEEFARMM 152
DGDG++ EEF M+
Sbjct: 93 DGDGKIGAEEFQEMV 107
>pdb|1BU3|A Chain A, Refined Crystal Structure Of Calcium-Bound Silver Hake (Pi
4.2) Parvalbumin At 1.65 A
Length = 109
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 87 EAQEELKEAFKVFDKDQDGYISPNELR---HVMMNLGEKLTDEELEQMILEADSDGDGQV 143
++ +++K+AF V D+D+ G+I +EL+ V LTD E + + DSDGDG +
Sbjct: 39 KSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDGAI 98
Query: 144 NYEEFARMM 152
+E+A ++
Sbjct: 99 GVDEWAALV 107
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 15/126 (11%)
Query: 35 TFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLKLMATKMKENEAQEELKE 94
TF+E+ S + Q + + N D D NG + F +F+K ++ ++ QE+L
Sbjct: 86 TFKEIYS--QFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLR-GTVQEKLNW 142
Query: 95 AFKVFDKDQDGYISPNELRHVMMN------------LGEKLTDEELEQMILEADSDGDGQ 142
AF ++D ++DGYI+ E+ +M L E + +E + D + DG
Sbjct: 143 AFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGV 202
Query: 143 VNYEEF 148
V +EF
Sbjct: 203 VTIDEF 208
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 56/119 (47%), Gaps = 11/119 (9%)
Query: 5 IYAEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDL 64
IY++ D F+ D D +G ++FE+ + L + +E+L N D+
Sbjct: 90 IYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAFNLYDI 149
Query: 65 DGNGTI---EFLEFLKLMATKM--------KENEAQEELKEAFKVFDKDQDGYISPNEL 112
+ +G I E L+ +K + M KE+ ++ ++ F+ DK++DG ++ +E
Sbjct: 150 NKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEF 208
>pdb|1QX2|A Chain A, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
pdb|1QX2|B Chain B, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
Length = 76
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 87 EAQEELKEAFKVFDKDQ--DGYISPNELRHVMMNLGEKLTD--EELEQMILEADSDGDGQ 142
++ EE+K AF+VF + IS EL+ VM LG L L++MI E D +GDG+
Sbjct: 2 KSPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGE 61
Query: 143 VNYEEFARMM 152
V++EEF MM
Sbjct: 62 VSFEEFLVMM 71
Score = 27.3 bits (59), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 18 EFQEAFSMLD-KDGD-GCITFEELASAIKSLDQNPTE--EELRNMINEVDLDGNGTIEFL 73
E + AF + K+GD I+ EEL +++L + + L MI EVD +G+G + F
Sbjct: 6 EIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFE 65
Query: 74 EFLKLM 79
EFL +M
Sbjct: 66 EFLVMM 71
>pdb|1QXP|A Chain A, Crystal Structure Of A Mu-Like Calpain
pdb|1QXP|B Chain B, Crystal Structure Of A Mu-Like Calpain
Length = 900
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 81/159 (50%), Gaps = 18/159 (11%)
Query: 4 NIYAEDVLPEDQIAE-FQEAFSMLDKDGDGCITFEELASAI-------KSLDQNP-TEEE 54
N+ E VL E++I + F+ FS L D D I+ +EL + + K L N + E
Sbjct: 520 NLPDEKVLSEEEIDDNFKTLFSKLAGD-DMEISVKELQTILNRIISKHKDLRTNGFSLES 578
Query: 55 LRNMINEVDLDGNGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRH 114
R+M+N +D DGNG + +EF L N + L F+ FD D+ G +S E+R
Sbjct: 579 CRSMVNLMDRDGNGKLGLVEFNILW------NRIRNYLT-IFRKFDLDKSGSMSAYEMRM 631
Query: 115 VMMNLGEKLTDEELEQMILEADSDGDGQVNYEEFARMML 153
+ G KL +L Q+I+ +D + ++++ F R ++
Sbjct: 632 AIEAAGFKLPC-QLHQVIVARFADDELIIDFDNFVRCLV 669
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 90 EELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEF 148
++++ FK FD + DG IS +EL + LG D E+++M+ E D+DGDG +++ EF
Sbjct: 3 DDMERIFKRFDTNGDGKISLSELTDALRTLGSTSAD-EVQRMMAEIDTDGDGFIDFNEF 60
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Query: 20 QEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLKLM 79
+ F D +GDG I+ EL A+++L + + +E++ M+ E+D DG+G I+F EF+
Sbjct: 6 ERIFKRFDTNGDGKISLSELTDALRTL-GSTSADEVQRMMAEIDTDGDGFIDFNEFISFC 64
Query: 80 ATKMKENEAQEELKEAFKVF 99
N +K+ KVF
Sbjct: 65 ------NANPGLMKDVAKVF 78
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 90 EELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEF 148
++++ FK FD + DG IS +EL + LG D E+++M+ E D+DGDG +++ EF
Sbjct: 2 DDMERIFKRFDTNGDGKISLSELTDALRTLGSTSAD-EVQRMMAEIDTDGDGFIDFNEF 59
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Query: 20 QEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLKLM 79
+ F D +GDG I+ EL A+++L + + +E++ M+ E+D DG+G I+F EF+
Sbjct: 5 ERIFKRFDTNGDGKISLSELTDALRTL-GSTSADEVQRMMAEIDTDGDGFIDFNEFISFC 63
Query: 80 ATKMKENEAQEELKEAFKVF 99
N +K+ KVF
Sbjct: 64 ------NANPGLMKDVAKVF 77
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 66/129 (51%), Gaps = 10/129 (7%)
Query: 32 GCITFEELAS--AIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLKLMATKMKENEAQ 89
G T E + ++ L+Q + + + N D + +G ++FLEF+ + M+E + +
Sbjct: 35 GLQTLHEFKTLLGLQGLNQK-ANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQE-KME 92
Query: 90 EELKEAFKVFDKDQDGYISPNELRHVMM-----NLGEKLTDEELEQMILEA-DSDGDGQV 143
++LK FK++D D +G I NEL + M N + L+ EE ++ D + DG++
Sbjct: 93 QKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGEL 152
Query: 144 NYEEFARMM 152
EEF M
Sbjct: 153 TLEEFINGM 161
Score = 33.5 bits (75), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Query: 21 EAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTI---EFLE-FL 76
+ ++ D + DG + F E +A+ + Q E++L+ D DGNG+I E L+ F+
Sbjct: 61 QVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNELLDMFM 120
Query: 77 KLMATKMKENEAQEE-LKEAFKVFDKDQDGYISPNELRHVM 116
+ A ++ + EE + F D + DG ++ E + M
Sbjct: 121 AVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEEFINGM 161
Score = 30.0 bits (66), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 12/84 (14%)
Query: 23 FSMLDKDGDGCITFEELAS---AIKSLD--QNPTEEELRNMI-NEVDLDGNGTIEFLEFL 76
F + D DG+G I EL A+++L+ Q + EE N++ +++D++ +G + EF+
Sbjct: 99 FKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEEFI 158
Query: 77 KLMATKMKENEAQEELKEAFKVFD 100
MA + Q+ L+ +K FD
Sbjct: 159 NGMA------KDQDLLEIVYKSFD 176
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/80 (20%), Positives = 40/80 (50%)
Query: 74 EFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMIL 133
EF L+ + +A + + + + FD ++DG++ E + + ++ +++L+
Sbjct: 41 EFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFK 100
Query: 134 EADSDGDGQVNYEEFARMML 153
D+DG+G ++ E M +
Sbjct: 101 LYDADGNGSIDKNELLDMFM 120
>pdb|1OMD|A Chain A, Structure Of Oncomodulin Refined At 1.85 Angstroms
Resolution. An Example Of Extensive Molecular
Aggregation Via Ca2+
pdb|1RRO|A Chain A, Refinement Of Recombinant Oncomodulin At 1.30 Angstroms
Resolution
pdb|2NLN|A Chain A, Solution Structure Of Calcium-Free Rat Beta-Parvalbumin
Length = 108
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 77 KLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNL---GEKLTDEELEQMIL 133
K T + ++K+ F+ D DQ GY+ +EL++ + +LT+ E + ++
Sbjct: 28 KFFQTSGLSKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMD 87
Query: 134 EADSDGDGQVNYEEFARMM 152
AD+DGDG++ +EF M+
Sbjct: 88 AADNDGDGKIGADEFQEMV 106
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 55/98 (56%), Gaps = 8/98 (8%)
Query: 58 MINEVDLDGNGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMM 117
M D + +G I+F+E++ ++ +K + ++L+ FK++D D +G I EL +++
Sbjct: 57 MFETFDFNKDGYIDFMEYVAALSLVLK-GKVDQKLRWYFKLYDVDGNGCIDRGELLNIIK 115
Query: 118 NL------GEKLTDEELEQMILEA-DSDGDGQVNYEEF 148
+ E +T EE M+ + D +GDG+++ EEF
Sbjct: 116 AIRAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEF 153
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%), Gaps = 7/61 (11%)
Query: 23 FSMLDKDGDGCITFEELASAIKSL------DQNPTEEELRNMI-NEVDLDGNGTIEFLEF 75
F + D DG+GCI EL + IK++ ++ T EE NM+ +++D++G+G + EF
Sbjct: 94 FKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEF 153
Query: 76 L 76
+
Sbjct: 154 M 154
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/113 (20%), Positives = 49/113 (43%), Gaps = 3/113 (2%)
Query: 40 ASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLKLMATKMKENEAQEELKEAFKVF 99
+ A++ L + + + E +G + EF + K A + +++ F+ F
Sbjct: 5 SKAVEELSATECHQWYKKFMTECP---SGQLTLYEFKQFFGLKNLSPSANKYVEQMFETF 61
Query: 100 DKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEFARMM 152
D ++DGYI E + + + D++L D DG+G ++ E ++
Sbjct: 62 DFNKDGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNII 114
>pdb|1RTP|1 Chain 1, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|2 Chain 2, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|3 Chain 3, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RWY|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|B Chain B, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|C Chain C, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|2JWW|A Chain A, Calcium-Free Rat Alpha-Parvalbumin
Length = 109
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 74 EFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNL---GEKLTDEELEQ 130
+F +++ K K + +++K+ F + DKD+ G+I +EL ++ L+ +E +
Sbjct: 28 KFFQMVGLKKK---SADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKT 84
Query: 131 MILEADSDGDGQVNYEEFARMM 152
++ D DGDG++ EEF+ ++
Sbjct: 85 LMAAGDKDGDGKIGVEEFSTLV 106
Score = 33.9 bits (76), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 20 QEAFSMLDKDGDGCITFEELASAIKSLDQNP---TEEELRNMINEVDLDGNGTIEFLEFL 76
++ F +LDKD G I +EL S +K + + +E + ++ D DG+G I EF
Sbjct: 44 KKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFS 103
Query: 77 KLMA 80
L+A
Sbjct: 104 TLVA 107
>pdb|3F45|A Chain A, Structure Of The R75a Mutant Of Rat Alpha-Parvalbumin
Length = 109
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 74 EFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTD---EELEQ 130
+F +++ K K + +++K+ F + DKD+ G+I +EL ++ D +E +
Sbjct: 28 KFFQMVGLKKK---SADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDAADLSAKETKT 84
Query: 131 MILEADSDGDGQVNYEEFARMM 152
++ D DGDG++ EEF+ ++
Sbjct: 85 LMAAGDKDGDGKIGVEEFSTLV 106
Score = 33.9 bits (76), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 20 QEAFSMLDKDGDGCITFEELASAIKSLDQNPTE---EELRNMINEVDLDGNGTIEFLEFL 76
++ F +LDKD G I +EL S +K + + +E + ++ D DG+G I EF
Sbjct: 44 KKVFHILDKDKSGFIEEDELGSILKGFSSDAADLSAKETKTLMAAGDKDGDGKIGVEEFS 103
Query: 77 KLMA 80
L+A
Sbjct: 104 TLVA 107
>pdb|1A75|B Chain B, Whiting Parvalbumin
Length = 109
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 85 ENEAQEELKEAFKVFDKDQDGYISPNELR---HVMMNLGEKLTDEELEQMILEADSDGDG 141
++ +++K+AF D+D+ G+I +EL+ V LTD E + + DSDGDG
Sbjct: 37 SGKSADDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGDG 96
Query: 142 QVNYEEFARMM 152
+ EE+ ++
Sbjct: 97 AIGVEEWVALV 107
>pdb|1A75|A Chain A, Whiting Parvalbumin
Length = 108
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 85 ENEAQEELKEAFKVFDKDQDGYISPNELR---HVMMNLGEKLTDEELEQMILEADSDGDG 141
++ +++K+AF D+D+ G+I +EL+ V LTD E + + DSDGDG
Sbjct: 36 SGKSADDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGDG 95
Query: 142 QVNYEEFARMM 152
+ EE+ ++
Sbjct: 96 AIGVEEWVALV 106
>pdb|1B9A|A Chain A, Parvalbumin (Mutation;d51a, F102w)
Length = 108
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 86 NEAQEELKEAFKVFDKDQDGYISPNELRHVMMNL---GEKLTDEELEQMILEADSDGDGQ 142
+++ +++K+AF + +D+ G+I +EL+ + N LTD E + + DSDGDG+
Sbjct: 37 SKSADDVKKAFAIIAQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGK 96
Query: 143 VNYEEFARMM 152
+ +E+ ++
Sbjct: 97 IGVDEWTALV 106
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 93 KEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEFARMM 152
K F+ FDK++DG +S +E R V + T E++ + E D DG+G++N +EF +
Sbjct: 4 KRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCI 63
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 29/60 (48%)
Query: 20 QEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLKLM 79
+ F DK+ DG ++ +E + T+E++ E+D+DGNG + EF +
Sbjct: 4 KRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCI 63
>pdb|2KQY|A Chain A, Solution Structure Of Avian Thymic Hormone
Length = 108
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 85 ENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEK---LTDEELEQMILEADSDGDG 141
++ +++K+ F + D+D+ G+I EL+ + N LT E + + D+DGDG
Sbjct: 36 SSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDG 95
Query: 142 QVNYEEFARMM 152
++ EEF ++
Sbjct: 96 KIGVEEFQSLV 106
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Query: 14 DQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNP---TEEELRNMINEVDLDGNGTI 70
DQI ++ F +LD+D G I EEL +K+ + T E + + D DG+G I
Sbjct: 41 DQI---KKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKI 97
Query: 71 EFLEFLKLM 79
EF L+
Sbjct: 98 GVEEFQSLV 106
>pdb|3FS7|A Chain A, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|B Chain B, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|C Chain C, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|D Chain D, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|E Chain E, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|F Chain F, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|G Chain G, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|H Chain H, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
Length = 109
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 85 ENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEK---LTDEELEQMILEADSDGDG 141
++ +++K+ F + D+D+ G+I EL+ + N LT E + + D+DGDG
Sbjct: 37 SSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDG 96
Query: 142 QVNYEEFARMM 152
++ EEF ++
Sbjct: 97 KIGVEEFQSLV 107
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Query: 14 DQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNP---TEEELRNMINEVDLDGNGTI 70
DQI ++ F +LD+D G I EEL +K+ + T E + + D DG+G I
Sbjct: 42 DQI---KKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKI 98
Query: 71 EFLEFLKLM 79
EF L+
Sbjct: 99 GVEEFQSLV 107
>pdb|1JUO|A Chain A, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
pdb|1JUO|B Chain B, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
Length = 198
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 11/107 (10%)
Query: 33 CITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLKLMATKMKENEAQEEL 92
C+T +A K + E R M++ +D D +GT+ F EF +L A
Sbjct: 57 CLTQSGIAGGYKPFNL----ETCRLMVSMLDRDMSGTMGFNEFKELWAVL-------NGW 105
Query: 93 KEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDG 139
++ F FD D+ G + P EL+ + +G +L+ + + + ++G
Sbjct: 106 RQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYSTNG 152
>pdb|1G33|A Chain A, Crystal Structure Of Rat Parvalbumin Without The
N-Terminal Domain
Length = 73
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 87 EAQEELKEAFKVFDKDQDGYISPNELRHVMMNL---GEKLTDEELEQMILEADSDGDGQV 143
++ +++K+ F + DKD+ G+I +EL ++ L+ +E + ++ D DGDG++
Sbjct: 2 KSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKI 61
Query: 144 NYEEFARMM 152
EEF+ ++
Sbjct: 62 GVEEFSTLV 70
Score = 33.9 bits (76), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNP---TEEELRNMINEVDLDGNGTIEFLE 74
+ ++ F +LDKD G I +EL S +K + + +E + ++ D DG+G I E
Sbjct: 6 DVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEE 65
Query: 75 FLKLMA 80
F L+A
Sbjct: 66 FSTLVA 71
>pdb|1B8C|A Chain A, Parvalbumin
pdb|1B8C|B Chain B, Parvalbumin
pdb|1B8L|A Chain A, Calcium-Bound D51aE101DF102W TRIPLE MUTANT OF BETA CARP
Parvalbumin
Length = 108
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 86 NEAQEELKEAFKVFDKDQDGYISPNELRHVMMNL---GEKLTDEELEQMILEADSDGDGQ 142
+++ +++K+AF + +D+ G+I +EL+ + N LTD E + + DSDGDG+
Sbjct: 37 SKSADDVKKAFAIIAQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGK 96
Query: 143 VNYEEFARMM 152
+ +++ ++
Sbjct: 97 IGVDDWTALV 106
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 56/103 (54%), Gaps = 13/103 (12%)
Query: 58 MINEVDLDGNGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHV-- 115
+ N D + +G IEF EF++ ++ + E+L+ AFK++D D DGYI+ NE+ +
Sbjct: 68 VFNVFDENKDGRIEFSEFIQALSVTSR-GTLDEKLRWAFKLYDLDNDGYITRNEMLDIVD 126
Query: 116 ----MMNLGEKLTDEE------LEQMILEADSDGDGQVNYEEF 148
M+ +L +EE ++++ D + DG++ +EF
Sbjct: 127 AIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEF 169
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 46/103 (44%), Gaps = 11/103 (10%)
Query: 22 AFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLKLMAT 81
F++ D++ DG I F E A+ + +E+LR DLD +G I E L ++
Sbjct: 68 VFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDA 127
Query: 82 KMK-----------ENEAQEELKEAFKVFDKDQDGYISPNELR 113
+ EN ++ + F + DK+ DG ++ E +
Sbjct: 128 IYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQ 170
>pdb|1GJY|A Chain A, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|B Chain B, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|C Chain C, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|D Chain D, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
Length = 167
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 11/107 (10%)
Query: 33 CITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLKLMATKMKENEAQEEL 92
C+T +A K + E R M++ +D D +GT+ F EF +L A
Sbjct: 26 CLTQSGIAGGYKPFNL----ETCRLMVSMLDRDMSGTMGFNEFKELWA-------VLNGW 74
Query: 93 KEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDG 139
++ F FD D+ G + P EL+ + +G +L + + + + G
Sbjct: 75 RQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRYSTSG 121
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 77/158 (48%), Gaps = 22/158 (13%)
Query: 17 AEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEE------ELRNMINEVDLDGNGTI 70
++F E + D DG G + +EL + I+ L Q + E++ +++ +G I
Sbjct: 16 SQFFEIWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQRDDGKI 75
Query: 71 EFLEFLKLMAT--------KMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEK 122
+E ++ T + ++ ++ EE + ++ +D D G+I EL++ + +L EK
Sbjct: 76 GIVELAHVLPTEENFLLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEK 135
Query: 123 ----LTDEELEQ----MILEADSDGDGQVNYEEFARMM 152
+ D +L + M+ DS+ DG++ E AR++
Sbjct: 136 ANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLL 173
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 55/124 (44%), Gaps = 23/124 (18%)
Query: 18 EFQEAFSMLDKDGDGCITFEELAS--------AIKSLDQNPTEEELRNMINEVDLDGNGT 69
EF + + D D G I EEL + A K++D E M+ D + +G
Sbjct: 104 EFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGK 163
Query: 70 IEFLE-----------FLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMN 118
+E E LK KM +E +AF+++D+D +GYI NEL ++ +
Sbjct: 164 LELTEMARLLPVQENFLLKFQGIKM----CGKEFNKAFELYDQDGNGYIDENELDALLKD 219
Query: 119 LGEK 122
L EK
Sbjct: 220 LCEK 223
>pdb|1XVJ|A Chain A, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
pdb|1XVJ|B Chain B, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
Length = 109
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 74 EFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNL---GEKLTDEELEQ 130
+F +++ K K + +++K+ F + DKD+ G+I +EL ++ L+ +E +
Sbjct: 28 KFFQMVGLKKK---SADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKT 84
Query: 131 MILEADSDGDGQVNYEEFARMM 152
++ D DG G++ EEF+ ++
Sbjct: 85 LMAAGDKDGSGKIEVEEFSTLV 106
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 20 QEAFSMLDKDGDGCITFEELASAIKSLDQNP---TEEELRNMINEVDLDGNGTIEFLEFL 76
++ F +LDKD G I +EL S +K + + +E + ++ D DG+G IE EF
Sbjct: 44 KKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGSGKIEVEEFS 103
Query: 77 KLMA 80
L+A
Sbjct: 104 TLVA 107
>pdb|1RJV|A Chain A, Solution Structure Of Human Alpha-Parvalbumin Refined With
A Paramagnetism-Based Strategy
pdb|1RK9|A Chain A, Solution Structure Of Human Alpha-Parvalbumin (Minimized
Average Structure)
Length = 110
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 74 EFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNL---GEKLTDEELEQ 130
+F +++ K K + +++K+ F + DKD+ G+I +EL ++ L+ +E +
Sbjct: 29 KFFQMVGLKKK---SADDVKKVFHMLDKDKSGFIEEDELGFILKGFSPDARDLSAKETKM 85
Query: 131 MILEADSDGDGQVNYEEFARMM 152
++ D DGDG++ +EF+ ++
Sbjct: 86 LMAAGDKDGDGKIGVDEFSTLV 107
Score = 30.8 bits (68), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 20 QEAFSMLDKDGDGCITFEELASAIKSLDQNP---TEEELRNMINEVDLDGNGTIEFLEFL 76
++ F MLDKD G I +EL +K + + +E + ++ D DG+G I EF
Sbjct: 45 KKVFHMLDKDKSGFIEEDELGFILKGFSPDARDLSAKETKMLMAAGDKDGDGKIGVDEFS 104
Query: 77 KLMA 80
L+A
Sbjct: 105 TLVA 108
>pdb|2JC2|A Chain A, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|B Chain B, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|C Chain C, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|D Chain D, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
Length = 198
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 11/107 (10%)
Query: 33 CITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLKLMATKMKENEAQEEL 92
C+T +A K + E R M++ +D D +GT+ F EF +L A
Sbjct: 57 CLTQSGIAGGYKPFNL----ETCRLMVSMLDRDMSGTMGFNEFKELWAVL-------NGW 105
Query: 93 KEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDG 139
++ F D D+ G + P EL+ + +G +L+ + + + ++G
Sbjct: 106 RQHFISLDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYSTNG 152
>pdb|1UHN|A Chain A, The Crystal Structure Of The Calcium Binding Protein
Atcbl2 From Arabidopsis Thaliana
Length = 189
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 66/132 (50%), Gaps = 11/132 (8%)
Query: 31 DGCITFEELASAIKSLDQNPTEEELRNMINEV-DLDGNGTIEFLEFLKLMATKMKENEAQ 89
DG I EE A+ N E + + ++ D NG + F EF + ++
Sbjct: 33 DGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPID 90
Query: 90 EELKEAFKVFDKDQDGYISPNELRHVM--------MNLGEKLTDEELEQMILEADSDGDG 141
+++ +F+++D Q G+I E++ ++ MNL + + ++ +++ EAD+ DG
Sbjct: 91 DKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDG 150
Query: 142 QVNYEEFARMML 153
+++ EE+ ++L
Sbjct: 151 KIDKEEWRSLVL 162
>pdb|2ZFD|A Chain A, The Crystal Structure Of Plant Specific Calcium Binding
Protein Atcbl2 In Complex With The Regulatory Domain Of
Atcipk14
Length = 226
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 66/132 (50%), Gaps = 11/132 (8%)
Query: 31 DGCITFEELASAIKSLDQNPTEEELRNMINEV-DLDGNGTIEFLEFLKLMATKMKENEAQ 89
DG I EE A+ N E + + ++ D NG + F EF + ++
Sbjct: 64 DGLINKEEFQLAL--FKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPID 121
Query: 90 EELKEAFKVFDKDQDGYISPNELRHVM--------MNLGEKLTDEELEQMILEADSDGDG 141
+++ +F+++D Q G+I E++ ++ MNL + + ++ +++ EAD+ DG
Sbjct: 122 DKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDG 181
Query: 142 QVNYEEFARMML 153
+++ EE+ ++L
Sbjct: 182 KIDKEEWRSLVL 193
>pdb|3H4S|E Chain E, Structure Of The Complex Of A Mitotic Kinesin With Its
Calcium Binding Regulator
Length = 135
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 4/105 (3%)
Query: 50 PTEEELRNMINEVDLDGNGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISP 109
PTE ++M+ E ++ + L +MA KM E EL + F + + I+
Sbjct: 3 PTE---KSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITA 59
Query: 110 NELRHVMMNLG-EKLTDEELEQMILEADSDGDGQVNYEEFARMML 153
LR LG E ++ E+ + M+ E D DGDG +N EF +M+
Sbjct: 60 ESLRRNSGILGIEGMSKEDAQGMVREGDLDGDGALNQTEFCVLMV 104
>pdb|2D8N|A Chain A, Crystal Structure Of Human Recoverin At 2.2 A Resolution
Length = 207
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 53/122 (43%), Gaps = 13/122 (10%)
Query: 4 NIYAEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVD 63
+IYA+ D A Q F D + DG + F+E A+ T ++L + D
Sbjct: 58 SIYAKFFPDTDPKAYAQHVFRSFDSNLDGTLDFKEYVIALHXTTAGKTNQKLEWAFSLYD 117
Query: 64 LDGNGTIEFLEFLKLMATKMK-------------ENEAQEELKEAFKVFDKDQDGYISPN 110
+DGNGTI E L+++ K EN ++ ++ +K F K+ D ++
Sbjct: 118 VDGNGTISKNEVLEIVXAIFKXITPEDVKLLPDDENTPEKRAEKIWKYFGKNDDDKLTEK 177
Query: 111 EL 112
E
Sbjct: 178 EF 179
>pdb|1DGU|A Chain A, Homology-Based Model Of Calcium-Saturated Cib (Calcium-And
Integrin-Binding Protein)
pdb|1DGV|A Chain A, Homology-Based Model Of Apo Cib (Calcium-And Integrin-
Binding Protein)
pdb|1XO5|A Chain A, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1XO5|B Chain B, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1Y1A|A Chain A, Crystal Structure Of Calcium And Integrin Binding Protein
pdb|1Y1A|B Chain B, Crystal Structure Of Calcium And Integrin Binding Protein
Length = 183
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 69/130 (53%), Gaps = 16/130 (12%)
Query: 34 ITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLKLMATKMKENEAQEELK 93
+ FE++ S + L NP +E + + + ++ F +FL L++ + + A ++K
Sbjct: 45 VPFEQILS-LPELKANPFKERICRVFSTSP--AKDSLSFEDFLDLLS--VFSDTATPDIK 99
Query: 94 E--AFKVFDKDQDGYISPNELRHVMMNL---GE--KLTDEELEQMI----LEADSDGDGQ 142
AF++FD D DG ++ +L ++ L GE +L+ E++Q+I E+D D DG
Sbjct: 100 SHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGT 159
Query: 143 VNYEEFARMM 152
+N EF ++
Sbjct: 160 INLSEFQHVI 169
>pdb|2L4H|A Chain A, The Solution Structure Of Calcium Bound Cib1
pdb|2L4I|A Chain A, The Solution Structure Of Magnesium Bound Cib1
pdb|2LM5|A Chain A, Solution Structure Of Ca2+-Cib1 In Complex With The
Cytoplasmic Domain Of The Integrin Aiib Subunit
Length = 214
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 69/130 (53%), Gaps = 16/130 (12%)
Query: 34 ITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLKLMATKMKENEAQEELK 93
+ FE++ S + L NP +E + + + ++ F +FL L++ + + A ++K
Sbjct: 76 VPFEQILS-LPELKANPFKERICRVFSTSP--AKDSLSFEDFLDLLS--VFSDTATPDIK 130
Query: 94 E--AFKVFDKDQDGYISPNELRHVMMNL---GE--KLTDEELEQMI----LEADSDGDGQ 142
AF++FD D DG ++ +L ++ L GE +L+ E++Q+I E+D D DG
Sbjct: 131 SHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGT 190
Query: 143 VNYEEFARMM 152
+N EF ++
Sbjct: 191 INLSEFQHVI 200
>pdb|2AUC|A Chain A, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
pdb|2AUC|B Chain B, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
pdb|2AUC|C Chain C, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
Length = 126
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 66/126 (52%), Gaps = 6/126 (4%)
Query: 28 KDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLKLMATKMKENE 87
K +G + E+ + + L P+ + + + DL G+ ++ + ++L+ + + + +
Sbjct: 7 KSSNGKLRIEDASHNARKLGLAPSSTDEKKI---RDLYGD-SLTYEQYLEYLTXCVHDRD 62
Query: 88 AQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEE 147
EEL + F FD + G+++ N+ ++++ G+ LT++E L A S D ++NY+
Sbjct: 63 NXEELIKXFSHFDNNSSGFLTKNQXKNILTTWGDALTEQEANDA-LNAFSSED-RINYKL 120
Query: 148 FARMML 153
F +L
Sbjct: 121 FCEDIL 126
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 37/81 (45%)
Query: 4 NIYAEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVD 63
IY++ D A Q F D + DG + F+E A+ T ++L + D
Sbjct: 51 TIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYD 110
Query: 64 LDGNGTIEFLEFLKLMATKMK 84
+DGNGTI E L+++ K
Sbjct: 111 VDGNGTISKNEVLEIVTAIFK 131
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 1/103 (0%)
Query: 46 LDQNPTEEELRNMINEVDLD-GNGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQD 104
L+ TEEEL + + +G I EF + + E + + + F+ FD + D
Sbjct: 19 LNTKFTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSD 78
Query: 105 GYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEE 147
G + E + T+++LE D DG+G ++ E
Sbjct: 79 GTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNE 121
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 37/81 (45%)
Query: 4 NIYAEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVD 63
IY++ D A Q F D + DG + F+E A+ T ++L + D
Sbjct: 50 TIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYD 109
Query: 64 LDGNGTIEFLEFLKLMATKMK 84
+DGNGTI E L+++ K
Sbjct: 110 VDGNGTISKNEVLEIVTAIFK 130
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 1/103 (0%)
Query: 46 LDQNPTEEELRNMINEVDLD-GNGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQD 104
L+ TEEEL + + +G I EF + + E + + + F+ FD + D
Sbjct: 18 LNTKFTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSD 77
Query: 105 GYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEE 147
G + E + T+++LE D DG+G ++ E
Sbjct: 78 GTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNE 120
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 11/119 (9%)
Query: 5 IYAEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDL 64
IYA+ D F+ D G + FE+ +A+ L + E+LR N D+
Sbjct: 41 IYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDI 100
Query: 65 DGNGTI---EFLEFLKLMATKM--------KENEAQEELKEAFKVFDKDQDGYISPNEL 112
+ +G I E ++ +K + M KE+ ++ + F+ DK++DG ++ +E
Sbjct: 101 NKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEF 159
Score = 34.7 bits (78), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 48/103 (46%), Gaps = 13/103 (12%)
Query: 58 MINEVDLDGNGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNEL----- 112
+ N D G+++F +F+ ++ ++ E+L+ F ++D ++DGYI+ E+
Sbjct: 58 LFNAFDTTQTGSVKFEDFVTALSILLR-GTVHEKLRWTFNLYDINKDGYINKEEMMDIVK 116
Query: 113 -------RHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEF 148
++ L E + ++ + D + DG V +EF
Sbjct: 117 AIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEF 159
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 37/81 (45%)
Query: 4 NIYAEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVD 63
IY++ D A Q F D + DG + F+E A+ T ++L + D
Sbjct: 50 TIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYD 109
Query: 64 LDGNGTIEFLEFLKLMATKMK 84
+DGNGTI E L+++ K
Sbjct: 110 VDGNGTISKNEVLEIVTAIFK 130
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 1/103 (0%)
Query: 46 LDQNPTEEELRNMINEVDLD-GNGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQD 104
L+ TEEEL + + +G I EF + + E + + + F+ FD + D
Sbjct: 18 LNTKFTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSD 77
Query: 105 GYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEE 147
G + E + T+++LE D DG+G ++ E
Sbjct: 78 GTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNE 120
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 37/81 (45%)
Query: 4 NIYAEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVD 63
IY++ D A Q F D + DG + F+E A+ T ++L + D
Sbjct: 50 TIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYD 109
Query: 64 LDGNGTIEFLEFLKLMATKMK 84
+DGNGTI E L+++ K
Sbjct: 110 VDGNGTISKNEVLEIVTAIFK 130
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 1/103 (0%)
Query: 46 LDQNPTEEELRNMINEVDLD-GNGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQD 104
L+ TEEEL + + +G I EF + + E + + + F+ FD + D
Sbjct: 18 LNTKFTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSD 77
Query: 105 GYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEE 147
G + E + T+++LE D DG+G ++ E
Sbjct: 78 GTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNE 120
>pdb|1YX7|A Chain A, Nmr Structure Of Calsensin, Energy Minimized Average
Structure.
pdb|1YX8|A Chain A, Nmr Structure Of Calsensin, 20 Low Energy Structures
Length = 83
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 11/76 (14%)
Query: 79 MATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMN------LGEKLTDEELEQMI 132
MA K+K EL+ AFK D + DGY++ EL+ M+ L + E ++I
Sbjct: 1 MACKVKA-----ELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLI 55
Query: 133 LEADSDGDGQVNYEEF 148
AD + DG+++ EEF
Sbjct: 56 KMADKNSDGKISKEEF 71
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Query: 17 AEFQEAFSMLDKDGDGCITFEELAS------AIKSLDQNPTEEELRNMINEVDLDGNGTI 70
AE + AF LD +GDG +T EL + A K+L ++ +E +I D + +G I
Sbjct: 7 AELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKI 66
Query: 71 EFLEFL 76
EFL
Sbjct: 67 SKEEFL 72
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 11/119 (9%)
Query: 5 IYAEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDL 64
IYA+ D F+ D G + FE+ +A+ L + E+LR N D+
Sbjct: 44 IYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDI 103
Query: 65 DGNGTI---EFLEFLKLMATKM--------KENEAQEELKEAFKVFDKDQDGYISPNEL 112
+ +G I E ++ +K + M KE+ ++ + F+ DK++DG ++ +E
Sbjct: 104 NKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEF 162
Score = 34.3 bits (77), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 48/103 (46%), Gaps = 13/103 (12%)
Query: 58 MINEVDLDGNGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNEL----- 112
+ N D G+++F +F+ ++ ++ E+L+ F ++D ++DGYI+ E+
Sbjct: 61 LFNAFDTTQTGSVKFEDFVTALSILLR-GTVHEKLRWTFNLYDINKDGYINKEEMMDIVK 119
Query: 113 -------RHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEF 148
++ L E + ++ + D + DG V +EF
Sbjct: 120 AIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEF 162
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 11/119 (9%)
Query: 5 IYAEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDL 64
IYA+ D F+ D G + FE+ +A+ L + E+LR N D+
Sbjct: 77 IYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDI 136
Query: 65 DGNGTI---EFLEFLKLMATKM--------KENEAQEELKEAFKVFDKDQDGYISPNEL 112
+ +G I E ++ +K + M KE+ ++ + F+ DK++DG ++ +E
Sbjct: 137 NKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEF 195
Score = 34.7 bits (78), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 48/103 (46%), Gaps = 13/103 (12%)
Query: 58 MINEVDLDGNGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNEL----- 112
+ N D G+++F +F+ ++ ++ E+L+ F ++D ++DGYI+ E+
Sbjct: 94 LFNAFDTTQTGSVKFEDFVTALSILLR-GTVHEKLRWTFNLYDINKDGYINKEEMMDIVK 152
Query: 113 -------RHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEF 148
++ L E + ++ + D + DG V +EF
Sbjct: 153 AIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEF 195
>pdb|1LA3|A Chain A, Solution Structure Of Recoverin Mutant, E85q
Length = 201
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 37/81 (45%)
Query: 4 NIYAEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVD 63
IY++ D A Q F D + DG + F++ A+ T ++L + D
Sbjct: 50 TIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKQYVIALHMTSAGKTNQKLEWAFSLYD 109
Query: 64 LDGNGTIEFLEFLKLMATKMK 84
+DGNGTI E L+++ K
Sbjct: 110 VDGNGTISKNEVLEIVTAIFK 130
>pdb|1OMV|A Chain A, Non-Myristoylated Bovine Recoverin (E85q Mutant) With
Calcium Bound To Ef-Hand 3
Length = 201
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 37/81 (45%)
Query: 4 NIYAEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVD 63
IY++ D A Q F D + DG + F++ A+ T ++L + D
Sbjct: 50 TIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKQYVIALHMTSAGKTNQKLEWAFSLYD 109
Query: 64 LDGNGTIEFLEFLKLMATKMK 84
+DGNGTI E L+++ K
Sbjct: 110 VDGNGTISKNEVLEIVTAIFK 130
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 12/73 (16%)
Query: 88 AQEELKEAFKVFDKDQDGYISPNEL------------RHVMMNLGEKLTDEELEQMILEA 135
E+LK AF ++D ++DGYI+ E+ RH L E E +E+ +
Sbjct: 7 VHEKLKWAFNLYDINKDGYITKEEMLAIMKSIYDMMGRHTYPILREDAPAEHVERFFEKM 66
Query: 136 DSDGDGQVNYEEF 148
D + DG V EEF
Sbjct: 67 DRNQDGVVTIEEF 79
Score = 29.6 bits (65), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 42/95 (44%), Gaps = 25/95 (26%)
Query: 18 EFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLK 77
+ + AF++ D + DG IT EE+ + +KS+ D+ G T L
Sbjct: 10 KLKWAFNLYDINKDGYITKEEMLAIMKSI---------------YDMMGRHTYPIL---- 50
Query: 78 LMATKMKENEAQEELKEAFKVFDKDQDGYISPNEL 112
+E+ E ++ F+ D++QDG ++ E
Sbjct: 51 ------REDAPAEHVERFFEKMDRNQDGVVTIEEF 79
>pdb|1K95|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|B Chain B, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
Length = 165
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 48/114 (42%), Gaps = 12/114 (10%)
Query: 31 DGCITFEELASAIKSLDQNPTE-----EELRNMINEVDLDGNGTIEFLEFLKLMATKMKE 85
DG + EEL + N T E R MI +D D G + F F +L A
Sbjct: 13 DGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWA----- 67
Query: 86 NEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDG 139
A KE F D+D G + +ELR + +G +L+ + L ++ +G
Sbjct: 68 --ALNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKNG 119
Score = 26.6 bits (57), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 12/49 (24%), Positives = 23/49 (46%)
Query: 19 FQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGN 67
++E F +D+DG G + EL AI + + + L ++ +G
Sbjct: 72 WKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKNGR 120
>pdb|1F4O|A Chain A, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4O|B Chain B, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4Q|A Chain A, Crystal Structure Of Apo Grancalcin
pdb|1F4Q|B Chain B, Crystal Structure Of Apo Grancalcin
Length = 165
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 48/114 (42%), Gaps = 12/114 (10%)
Query: 31 DGCITFEELASAIKSLDQNPTE-----EELRNMINEVDLDGNGTIEFLEFLKLMATKMKE 85
DG + EEL + N T E R MI +D D G + F F +L A
Sbjct: 13 DGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWA----- 67
Query: 86 NEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDG 139
A KE F D+D G + +ELR + +G +L+ + L ++ +G
Sbjct: 68 --ALNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKNG 119
Score = 26.6 bits (57), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 9/87 (10%)
Query: 19 FQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLKL 78
++E F +D+DG G + EL AI + + + L ++ NG I F +++
Sbjct: 72 WKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKR--YSKNGRIFFDDYVAC 129
Query: 79 MATKMKENEAQEELKEAFKVFDKDQDG 105
K++ L + FK D Q G
Sbjct: 130 -CVKLR------ALTDFFKKRDHLQQG 149
>pdb|3AKA|A Chain A, Structural Basis For Prokaryotic Calcium-Mediated
Regulation By A Streptomyces Coelicolor Calcium-Binding
Protein
Length = 166
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 63/157 (40%), Gaps = 27/157 (17%)
Query: 23 FSMLDKDGDGCITFEELASAIKSL----------DQ-----NPTEEELRNMINEVDLDGN 67
F+ D+DG+G I + + A K+L D+ E + + D DG+
Sbjct: 10 FTTFDQDGNGHIDRSDFSGAAKALLAEFGVAARSDRGQALYGGAEALWQGLAGIADRDGD 69
Query: 68 GTIEFLEFLKLMATKMKENE------AQEELKEAFKVFDKDQDGYISPNELRHVMMNLGE 121
I EF+ ++++ A+ L A V D D DG ++ + + G
Sbjct: 70 QRITREEFVTGAVKRLRDKPDRFAEIARPFLHAALGVADTDGDGAVTVADTARALTAFG- 128
Query: 122 KLTDEELEQMILEADSDGDGQVNYEE----FARMMLL 154
+ ++ Q D+DGDG+V E FAR +
Sbjct: 129 -VPEDLARQAAAALDTDGDGKVGETEIVPAFARYFTV 164
Score = 30.8 bits (68), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Query: 20 QEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLKLM 79
A + D DGDG +T + A A+ + E+ R +D DG+G + E +
Sbjct: 101 HAALGVADTDGDGAVTVADTARALTAF--GVPEDLARQAAAALDTDGDGKVGETEIVPAF 158
Query: 80 A 80
A
Sbjct: 159 A 159
>pdb|1SL8|A Chain A, Calcium-Loaded Apo-Aequorin From Aequorea Victoria
Length = 191
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 67/159 (42%), Gaps = 20/159 (12%)
Query: 15 QIAEFQEAFSMLDKDGDGCITFEELAS-----AIKSLDQNPTEEELRNMINEVDLDGNG- 68
I + F+ LD + +G I+ +E+ I +L P + + E G G
Sbjct: 14 WIGRHKHMFNFLDVNHNGRISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGM 73
Query: 69 -------TIEFLEFLKLMATKMKENEAQEELK-------EAFKVFDKDQDGYISPNELRH 114
E++E K +A++ + ++ ++ F + DKDQ+G IS +E +
Sbjct: 74 KYGVETEWPEYIEGWKRLASEELKRYSKNQITLIRLWGDALFDIIDKDQNGAISLDEWKA 133
Query: 115 VMMNLGEKLTDEELEQMILEADSDGDGQVNYEEFARMML 153
+ G + E+ E+ D D GQ++ +E R L
Sbjct: 134 YTKSAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHL 172
>pdb|3LI6|A Chain A, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|D Chain D, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|G Chain G, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|J Chain J, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
Length = 66
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 32/59 (54%)
Query: 23 FSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLKLMAT 81
F +D +GDG +++EE+ + + E+ L+ + +D DGNG I+ EF K +
Sbjct: 6 FKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 96 FKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEA-DSDGDGQVNYEEFARM 151
FK D + DG +S E++ ++ + +E+L Q+I ++ D+DG+G+++ EFA+
Sbjct: 6 FKEIDVNGDGAVSYEEVK-AFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 58 MINEVDLDGNGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNEL 112
+ E+D++G+G + + E +K +K + + ++ L+ FK D D +G I NE
Sbjct: 5 LFKEIDVNGDGAVSYEE-VKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEF 58
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 56/120 (46%), Gaps = 13/120 (10%)
Query: 5 IYAEDVLPEDQIAEFQE-AFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVD 63
IY + P + F E F++ D D +G I F+E A+ + ++L D
Sbjct: 51 IYKQ-FFPFGDPSAFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYD 109
Query: 64 LDGNGTIEFLEFLKLM---------ATKMKENE--AQEELKEAFKVFDKDQDGYISPNEL 112
LD NG I + E L+++ K+ E+E ++ + + F + DK++DG ++ E
Sbjct: 110 LDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEF 169
Score = 28.1 bits (61), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 28/58 (48%)
Query: 95 AFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEFARMM 152
F VFD D++GYI E + +++L D D +G ++Y+E R++
Sbjct: 68 VFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIV 125
>pdb|2QAC|A Chain A, The Closed Mtip-myosina-tail Complex From The Malaria
Parasite Invasion Machinery
pdb|4AOM|A Chain A, Mtip And Myoa Complex
Length = 146
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 14/58 (24%), Positives = 37/58 (63%)
Query: 70 IEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEE 127
+ + ++L+ ++ + + + EEL + F FD + GY++ +++++++ G+ LTD+E
Sbjct: 64 LTYEQYLEYLSICVHDKDNVEELIKMFAHFDNNCTGYLTKSQMKNILTTWGDALTDQE 121
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 53/119 (44%), Gaps = 11/119 (9%)
Query: 5 IYAEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDL 64
IYA+ D F+ D G + FE+ +A+ L + E+LR N D+
Sbjct: 41 IYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDI 100
Query: 65 DGNGTI---EFLEFLKLMATKM--------KENEAQEELKEAFKVFDKDQDGYISPNEL 112
+ +G I E ++ +K + M E+ ++ + F+ DK++DG ++ +E
Sbjct: 101 NKDGYINKEEMMDIVKAIYDMMGAYTYPVLAEDTPRQHVDVFFQKMDKNKDGIVTLDEF 159
Score = 35.0 bits (79), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 49/103 (47%), Gaps = 13/103 (12%)
Query: 58 MINEVDLDGNGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHV-- 115
+ N D G+++F +F+ ++ ++ E+L+ F ++D ++DGYI+ E+ +
Sbjct: 58 LFNAFDTTQTGSVKFEDFVTALSILLR-GTVHEKLRWTFNLYDINKDGYINKEEMMDIVK 116
Query: 116 ----MMN------LGEKLTDEELEQMILEADSDGDGQVNYEEF 148
MM L E + ++ + D + DG V +EF
Sbjct: 117 AIYDMMGAYTYPVLAEDTPRQHVDVFFQKMDKNKDGIVTLDEF 159
>pdb|1AJ5|A Chain A, Calpain Domain Vi Apo
pdb|1AJ5|B Chain B, Calpain Domain Vi Apo
Length = 173
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 8/101 (7%)
Query: 53 EELRNMINEVDLDGNGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNEL 112
+ R+M+ +D D G + F EF K + +K+ + +K FD D+ G I NEL
Sbjct: 47 DTCRSMVAVMDSDTTGKLGFEEF-KYLWNNIKKWQG------IYKRFDTDRSGTIGSNEL 99
Query: 113 RHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEFARMML 153
G L ++ + MI+ SD G ++++ F ++
Sbjct: 100 PGAFEAAGFHL-NQHIYSMIIRRYSDETGNMDFDNFISCLV 139
>pdb|3AKB|A Chain A, Structural Basis For Prokaryotic Calcium-Mediated
Regulation By A Streptomyces Coelicolor Calcium-Binding
Protein
Length = 166
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 63/157 (40%), Gaps = 27/157 (17%)
Query: 23 FSMLDKDGDGCITFEELASAIKSL----------DQ-----NPTEEELRNMINEVDLDGN 67
F+ D+DG+G I + + A K++ D+ E + + D DG+
Sbjct: 10 FTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIADRDGD 69
Query: 68 GTIEFLEFLKLMATKMKENE------AQEELKEAFKVFDKDQDGYISPNELRHVMMNLGE 121
I EF+ ++++ A+ L A V D D DG ++ + + G
Sbjct: 70 QRITREEFVTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAFG- 128
Query: 122 KLTDEELEQMILEADSDGDGQVNYEE----FARMMLL 154
+ ++ Q D+DGDG+V E FAR +
Sbjct: 129 -VPEDLARQAAAALDTDGDGKVGETEIVPAFARYFTV 164
Score = 30.8 bits (68), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Query: 20 QEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLKLM 79
A + D DGDG +T + A A+ + E+ R +D DG+G + E +
Sbjct: 101 HAALGVADTDGDGAVTVADTARALTAF--GVPEDLARQAAAALDTDGDGKVGETEIVPAF 158
Query: 80 A 80
A
Sbjct: 159 A 159
>pdb|1NP8|A Chain A, 18-K C-Terminally Trunucated Small Subunit Of Calpain
pdb|1NP8|B Chain B, 18-K C-Terminally Trunucated Small Subunit Of Calpain
Length = 159
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 8/101 (7%)
Query: 53 EELRNMINEVDLDGNGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNEL 112
+ R+M+ +D D G + F EF K + +K+ + +K FD D+ G I NEL
Sbjct: 54 DTCRSMVAVMDSDTTGKLGFEEF-KYLWNNIKKWQG------IYKRFDTDRSGTIGSNEL 106
Query: 113 RHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEFARMML 153
G L ++ + MI+ SD G ++++ F ++
Sbjct: 107 PGAFEAAGFHL-NQHIYSMIIRRYSDETGNMDFDNFISCLV 146
>pdb|1DF0|B Chain B, Crystal Structure Of M-Calpain
pdb|1U5I|B Chain B, Crystal Structure Analysis Of Rat M-Calpain Mutant Lys10
Thr
pdb|3DF0|B Chain B, Calcium-Dependent Complex Between M-Calpain And
Calpastatin
pdb|3BOW|B Chain B, Structure Of M-Calpain In Complex With Calpastatin
Length = 184
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 8/101 (7%)
Query: 53 EELRNMINEVDLDGNGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNEL 112
+ R+M+ +D D G + F EF K + +K+ + +K FD D+ G I NEL
Sbjct: 58 DTCRSMVAVMDSDTTGKLGFEEF-KYLWNNIKKWQG------IYKRFDTDRSGTIGSNEL 110
Query: 113 RHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEFARMML 153
G L ++ + MI+ SD G ++++ F ++
Sbjct: 111 PGAFEAAGFHL-NQHIYSMIIRRYSDETGNMDFDNFISCLV 150
>pdb|1DVI|A Chain A, Calpain Domain Vi With Calcium Bound
pdb|1DVI|B Chain B, Calpain Domain Vi With Calcium Bound
Length = 184
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Query: 56 RNMINEVDLDGNGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHV 115
R+M+ +D D G + F EF K + +K+ + +K FD D+ G I NEL
Sbjct: 61 RSMVAVMDSDTTGKLGFEEF-KYLWNNIKKWQG------IYKRFDTDRSGTIGSNELPGA 113
Query: 116 MMNLGEKLTDEELEQMILEADSDGDGQVNYEEFARMML 153
G L ++ + MI+ SD G ++++ F ++
Sbjct: 114 FEAAGFHL-NQHIYSMIIRRYSDETGNMDFDNFISCLV 150
>pdb|1EJ3|A Chain A, Crystal Structure Of Aequorin
pdb|1EJ3|B Chain B, Crystal Structure Of Aequorin
pdb|1UHI|A Chain A, Crystal Structure Of I-aequorin
pdb|1UHI|B Chain B, Crystal Structure Of I-aequorin
pdb|1UHK|A Chain A, Crystal Structure Of N-Aequorin
pdb|1UHK|B Chain B, Crystal Structure Of N-Aequorin
Length = 191
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 63/159 (39%), Gaps = 20/159 (12%)
Query: 15 QIAEFQEAFSMLDKDGDGCITFEELAS-----AIKSLDQNPTEEELRNMINEVDLDGNG- 68
I + F+ LD + +G I+ +E+ I +L P + + E G G
Sbjct: 14 WIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGM 73
Query: 69 -------TIEFLEFLKLMATKMKENEAQEELK-------EAFKVFDKDQDGYISPNELRH 114
++E K +AT E A+ E F + DKDQ+G I+ +E +
Sbjct: 74 KYGVETDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKA 133
Query: 115 VMMNLGEKLTDEELEQMILEADSDGDGQVNYEEFARMML 153
G + E+ E+ D D GQ++ +E R L
Sbjct: 134 YTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHL 172
>pdb|1JF0|A Chain A, The Crystal Structure Of Obelin From Obelia Geniculata At
1.82 A Resolution
Length = 195
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 16 IAEFQEA-FSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIE 71
I E+ +A F + DKDG G IT +E + + +P+EE+ DLD +G ++
Sbjct: 111 IREWGDAVFDIFDKDGSGTITLDEWKAYGRISGISPSEEDCEKTFQHCDLDNSGELD 167
>pdb|1EL4|A Chain A, Structure Of The Calcium-Regulated Photoprotein Obelin
Determined By Sulfur Sas
Length = 195
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 16 IAEFQEA-FSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIE 71
I E+ +A F + DKDG G IT +E + K +P++E+ DLD +G ++
Sbjct: 111 IREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLD 167
>pdb|2F8P|A Chain A, Crystal Structure Of Obelin Following Ca2+ Triggered
Bioluminescence Suggests Neutral Coelenteramide As The
Primary Excited State
Length = 195
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 16 IAEFQEA-FSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIE 71
I E+ +A F + DKDG G IT +E + K +P++E+ DLD +G ++
Sbjct: 111 IREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLD 167
>pdb|1JF2|A Chain A, Crystal Structure Of W92f Obelin Mutant From Obelia
Longissima At 1.72 Angstrom Resolution
pdb|1S36|A Chain A, Crystal Structure Of A Ca2+-Discharged Photoprotein:
Implications For The Mechanisms Of The Calcium Trigger
And The Bioluminescence
Length = 195
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 16 IAEFQEA-FSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIE 71
I E+ +A F + DKDG G IT +E + K +P++E+ DLD +G ++
Sbjct: 111 IREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLD 167
>pdb|1PON|A Chain A, Site Iii-Site Iv Troponin C Heterodimer, Nmr
pdb|1CTA|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTA|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
Length = 36
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 87 EAQEELKEAFKVFDKDQDGYISPNELRHVMMNLG 120
+++EEL AF++FDK+ DGYI EL ++ G
Sbjct: 2 KSEEELANAFRIFDKNADGYIDIEELGEILRATG 35
>pdb|3SIB|A Chain A, Crystal Structure Of Ure3-Binding Protein, Wild-Type
Length = 220
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 45/112 (40%), Gaps = 7/112 (6%)
Query: 9 DVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNG 68
+ +P DQ + F +D+D G + EL + + M+ D D NG
Sbjct: 43 NTIPLDQYTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNG 102
Query: 69 TIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLG 120
I F EF M + E F + D+++ G + P+E+ + LG
Sbjct: 103 HISFYEF-------MAMYKFMELAYNLFVMNDRNRSGTLEPHEILPALQQLG 147
Score = 30.4 bits (67), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 31/61 (50%)
Query: 91 ELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEFAR 150
+ + F D+D+ G + NEL G +L+ + +M+ D+D +G +++ EF
Sbjct: 52 RIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEFMA 111
Query: 151 M 151
M
Sbjct: 112 M 112
>pdb|1SL7|A Chain A, Crystal Structure Of Calcium-Loaded Apo-Obelin From Obelia
Longissima
Length = 195
Score = 35.4 bits (80), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 16 IAEFQEA-FSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIE 71
I E+ +A F + DKDG G IT +E + K +P++E+ DLD +G ++
Sbjct: 111 IREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDDSGDLD 167
>pdb|1UHH|A Chain A, Crystal Structure Of Cp-Aequorin
pdb|1UHH|B Chain B, Crystal Structure Of Cp-Aequorin
pdb|1UHJ|A Chain A, Crystal Structure Of Br-Aequorin
pdb|1UHJ|B Chain B, Crystal Structure Of Br-Aequorin
Length = 191
Score = 35.4 bits (80), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 62/159 (38%), Gaps = 20/159 (12%)
Query: 15 QIAEFQEAFSMLDKDGDGCITFEELAS-----AIKSLDQNPTEEELRNMINEVDLDGNG- 68
I + F+ LD + +G I+ +E I +L P + + E G G
Sbjct: 14 WIGRHKHXFNFLDVNHNGKISLDEXVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGX 73
Query: 69 -------TIEFLEFLKLMATKMKENEAQEELK-------EAFKVFDKDQDGYISPNELRH 114
++E K +AT E A+ E F + DKDQ+G I+ +E +
Sbjct: 74 KYGVETDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKA 133
Query: 115 VMMNLGEKLTDEELEQMILEADSDGDGQVNYEEFARMML 153
G + E+ E+ D D GQ++ +E R L
Sbjct: 134 YTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEXTRQHL 172
>pdb|2HPS|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri
Length = 186
Score = 34.7 bits (78), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 29/53 (54%)
Query: 96 FKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEF 148
+ D D+DGY+S E + + +G LTD++ D + +GQ++ +EF
Sbjct: 108 YDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEF 160
Score = 29.6 bits (65), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 29/54 (53%)
Query: 23 FSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFL 76
+ +D D DG ++ E + ++++ + T+++ N +D + NG I EFL
Sbjct: 108 YDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFL 161
>pdb|1QV0|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1QV1|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1SL9|A Chain A, Obelin From Obelia Longissima
Length = 195
Score = 34.7 bits (78), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 16 IAEFQEA-FSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIE 71
I E+ +A F + DKDG G IT +E + K +P++E+ DLD G ++
Sbjct: 111 IREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLD 167
>pdb|2HQ8|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
pdb|2HQ8|B Chain B, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
Length = 186
Score = 34.7 bits (78), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 29/53 (54%)
Query: 96 FKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEF 148
+ D D+DGY+S E + + +G LTD++ D + +GQ++ +EF
Sbjct: 108 YDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEF 160
Score = 30.0 bits (66), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 29/54 (53%)
Query: 23 FSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFL 76
+ +D D DG ++ E + ++++ + T+++ N +D + NG I EFL
Sbjct: 108 YDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFL 161
>pdb|2BE4|A Chain A, X-ray Structure An Ef-hand Protein From Danio Rerio
Dr.36843
pdb|2Q4U|A Chain A, Ensemble Refinement Of The Crystal Structure Of An Ef-Hand
Protein From Danio Rerio Dr.36843
Length = 272
Score = 33.5 bits (75), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 61/128 (47%), Gaps = 19/128 (14%)
Query: 8 EDVLPEDQIAEFQEAF-SMLDKDGDGCITFEELASAIKSLDQN---------PTEE--EL 55
+D + ++++ + +++F S D DG + EELA+ I ++N P + E
Sbjct: 47 KDKITDERVQQIKKSFXSAYDATFDGRLQIEELANXILPQEENFLLIFRREAPLDNSVEF 106
Query: 56 RNMINEVDLDGNGTI---EFLEFLKLM----ATKMKENEAQEELKEAFKVFDKDQDGYIS 108
+ + D D +G I E FLK + K+ N+ E K+FDK++DG +
Sbjct: 107 XKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAXXKIFDKNKDGRLD 166
Query: 109 PNELRHVM 116
N+L ++
Sbjct: 167 LNDLARIL 174
Score = 32.0 bits (71), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 10/70 (14%)
Query: 94 EAFKVFDKDQDGYISPNEL----RHVMMNL--GEKLTDEELEQM----ILEADSDGDGQV 143
+ ++ FD D +GYI EL RH + L +K+TDE ++Q+ D+ DG++
Sbjct: 15 QIWQHFDADDNGYIEGKELDDFFRHXLKKLQPKDKITDERVQQIKKSFXSAYDATFDGRL 74
Query: 144 NYEEFARMML 153
EE A +L
Sbjct: 75 QIEELANXIL 84
>pdb|2JJZ|A Chain A, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
Length = 150
Score = 33.5 bits (75), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 31/62 (50%)
Query: 92 LKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEFARM 151
KE + FD + +G I L+ +M LG T E+++MI E ++Y +F M
Sbjct: 52 FKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNM 111
Query: 152 ML 153
ML
Sbjct: 112 ML 113
>pdb|2JJZ|B Chain B, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2JJZ|C Chain C, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2JJZ|D Chain D, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2VTG|A Chain A, Crystal Structure Of Human Iba2, Trigonal Crystal Form
Length = 150
Score = 33.5 bits (75), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 31/62 (50%)
Query: 92 LKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEFARM 151
KE + FD + +G I L+ +M LG T E+++MI E ++Y +F M
Sbjct: 52 FKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNM 111
Query: 152 ML 153
ML
Sbjct: 112 ML 113
>pdb|2D58|A Chain A, Human Microglia-Specific Protein Iba1
Length = 107
Score = 33.1 bits (74), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 36/77 (46%)
Query: 6 YAEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLD 65
Y+ D ++ F+E + D +G+G I L ++ L T EL+ +I EV
Sbjct: 21 YSSDEDLPSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSG 80
Query: 66 GNGTIEFLEFLKLMATK 82
T + +FL++M K
Sbjct: 81 SGETFSYPDFLRMMLGK 97
>pdb|2I18|A Chain A, The Refined Structure Of C-Terminal Domain Of An Ef-Hand
Calcium Binding Protein From Entamoeba Histolytica
Length = 64
Score = 33.1 bits (74), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 92 LKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEFARM 151
LK +K+ D D DG ++ E+ G E++ + +++AD++GDG + EEF
Sbjct: 7 LKVLYKLMDVDGDGKLTKEEVTSFFKKHGI----EKVAEQVMKADANGDGYITLEEFLEF 62
Query: 152 ML 153
L
Sbjct: 63 SL 64
Score = 30.0 bits (66), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 7/56 (12%)
Query: 23 FSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTI---EFLEF 75
+ ++D DGDG +T EE+ S K E++ + + D +G+G I EFLEF
Sbjct: 11 YKLMDVDGDGKLTKEEVTSFFK----KHGIEKVAEQVMKADANGDGYITLEEFLEF 62
>pdb|2FCD|A Chain A, Solution Structure Of N-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 78
Score = 32.7 bits (73), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 26/41 (63%)
Query: 20 QEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMIN 60
++ F++ DK G G I + L ++++ NPT + ++++IN
Sbjct: 7 KDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIIN 47
>pdb|2G2B|A Chain A, Nmr Structure Of The Human Allograft Inflammatory Factor 1
Length = 150
Score = 32.3 bits (72), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 31/64 (48%)
Query: 19 FQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLKL 78
F+E + D +G+G I L ++ L T EL+ +I EV T + +FL++
Sbjct: 53 FKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRM 112
Query: 79 MATK 82
M K
Sbjct: 113 MLGK 116
>pdb|2PMY|A Chain A, Ef-Hand Domain Of Human Rasef
pdb|2PMY|B Chain B, Ef-Hand Domain Of Human Rasef
Length = 91
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 91 ELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEFAR 150
L+ F D ++ G + E R + L + D E L+AD DG + ++EFAR
Sbjct: 28 RLRSVFAACDANRSGRLEREEFRALCTELRVRPADAEAVFQRLDADR--DGAITFQEFAR 85
Query: 151 MML 153
L
Sbjct: 86 GFL 88
Score = 28.1 bits (61), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 17/34 (50%), Gaps = 4/34 (11%)
Query: 10 VLPEDQIAEFQEAFSMLDKDGDGCITFEELASAI 43
V P D A FQ LD D DG ITF+E A
Sbjct: 58 VRPADAEAVFQR----LDADRDGAITFQEFARGF 87
>pdb|3SJS|A Chain A, Crystal Structure Of Ure3-Binding Protein From Entamoeba
Histolytica, (D127a,N129a) Mutant, Native Form
pdb|3SIA|A Chain A, Crystal Structure Of Ure3-Binding Protein, (D127a,N129a)
Mutant, Iodide Phased
Length = 220
Score = 31.6 bits (70), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 43/112 (38%), Gaps = 7/112 (6%)
Query: 9 DVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNG 68
+ +P DQ + F +D+D G + EL + + M+ D D NG
Sbjct: 43 NTIPLDQYTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNG 102
Query: 69 TIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLG 120
I F EF M + E F + + + G + P+E+ + LG
Sbjct: 103 HISFYEF-------MAMYKFMELAYNLFVMNARARSGTLEPHEILPALQQLG 147
Score = 30.4 bits (67), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 31/61 (50%)
Query: 91 ELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEFAR 150
+ + F D+D+ G + NEL G +L+ + +M+ D+D +G +++ EF
Sbjct: 52 RIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEFMA 111
Query: 151 M 151
M
Sbjct: 112 M 112
>pdb|2LVV|A Chain A, Nmr Structure Of Tb24
Length = 226
Score = 31.6 bits (70), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 16 IAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTE-EELRNMINEVDLDGNGTIEFLE 74
I E F +DKDG + +E A+ L + + + + NE+D +G+G + F E
Sbjct: 132 IFELTVMFDTMDKDGSLLLELQEFKEALPKLKEWGVDITDATTVFNEIDTNGSGVVTFDE 191
Query: 75 FLKLMATK 82
F TK
Sbjct: 192 FSCWAVTK 199
Score = 30.0 bits (66), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 69/158 (43%), Gaps = 22/158 (13%)
Query: 10 VLPEDQIAEFQ----EAFSMLDKDGDGCITFEEL---ASAIKSLDQNPTE---------E 53
+P D+ AE + E F D +G G + F E+ I LD+ T +
Sbjct: 40 AIPRDKDAESKSRRIELFKQFDTNGTGKLGFREVLDGCYGILKLDEFTTHLPDIVQRAFD 99
Query: 54 ELRNMINEVDLDGN-GTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNEL 112
+ +++ N+V G +EFLEF +LM + + EL F DKD + E
Sbjct: 100 KAKDLGNKVKGVGEEDLVEFLEF-RLMLCYIYD---IFELTVMFDTMDKDGSLLLELQEF 155
Query: 113 RHVMMNLGEKLTD-EELEQMILEADSDGDGQVNYEEFA 149
+ + L E D + + E D++G G V ++EF+
Sbjct: 156 KEALPKLKEWGVDITDATTVFNEIDTNGSGVVTFDEFS 193
>pdb|3KPX|A Chain A, Crystal Structure Analysis Of Photoprotein Clytin
Length = 198
Score = 30.8 bits (68), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 16 IAEFQEA-FSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIE 71
I + EA F + DKDG G I+ +E + P++E+ DLD +G ++
Sbjct: 114 IRNWGEAVFDIFDKDGSGSISLDEWKTYGGISGICPSDEDAEKTFKHCDLDNSGKLD 170
>pdb|1NYA|A Chain A, Nmr Solution Structure Of Calerythrin, An Ef-hand Calcium-
Binding Protein
Length = 176
Score = 30.4 bits (67), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 24 SMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFL 76
M DK+ DG I +E A+ + +L + E N+VD +GNG + E L
Sbjct: 109 GMCDKNADGQINADEFAAWLTALGMSKAEAA--EAFNQVDTNGNGELSLDELL 159
Score = 29.6 bits (65), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 54/124 (43%), Gaps = 22/124 (17%)
Query: 51 TEEELRNMINEVDLDGNGTIEFLEFLK---LMATKMKENEAQEE---LKEAF-KVFDK-- 101
+ L+ + D DGNG +E +F K +A ++ E LK AF +FD
Sbjct: 5 ASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLA 64
Query: 102 -----DQDGYISPNELRHVMMNL----GE----KLTDEELEQMILEADSDGDGQVNYEEF 148
DG ++ + V NL GE ++ ++ ++ D + DGQ+N +EF
Sbjct: 65 KEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEF 124
Query: 149 ARMM 152
A +
Sbjct: 125 AAWL 128
Score = 26.2 bits (56), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 21/28 (75%)
Query: 17 AEFQEAFSMLDKDGDGCITFEELASAIK 44
AE EAF+ +D +G+G ++ +EL +A++
Sbjct: 136 AEAAEAFNQVDTNGNGELSLDELLTAVR 163
>pdb|1PON|B Chain B, Site Iii-Site Iv Troponin C Heterodimer, Nmr
Length = 36
Score = 30.0 bits (66), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 25/30 (83%)
Query: 123 LTDEELEQMILEADSDGDGQVNYEEFARMM 152
+T+E++E ++ ++D + DG+++++EF +MM
Sbjct: 2 VTEEDIEDLMKDSDKNNDGRIDFDEFLKMM 31
Score = 27.7 bits (60), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 22/29 (75%)
Query: 51 TEEELRNMINEVDLDGNGTIEFLEFLKLM 79
TEE++ +++ + D + +G I+F EFLK+M
Sbjct: 3 TEEDIEDLMKDSDKNNDGRIDFDEFLKMM 31
>pdb|1WY9|A Chain A, Crystal Structure Of Microglia-Specific Protein, Iba1
Length = 147
Score = 30.0 bits (66), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 35/77 (45%)
Query: 6 YAEDVLPEDQIAEFQEAFSMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLD 65
Y+ D ++ F+ + D +G+G I L ++ L T EL+ +I EV
Sbjct: 37 YSNDEDLPSKLEAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSG 96
Query: 66 GNGTIEFLEFLKLMATK 82
T + +FL++M K
Sbjct: 97 SEETFSYSDFLRMMLGK 113
>pdb|1HT9|A Chain A, Domain Swapping Ef-Hands
pdb|1HT9|B Chain B, Domain Swapping Ef-Hands
Length = 76
Score = 29.6 bits (65), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 21 EAFSMLDKDGDGCITFEELASAIKSLDQ 48
E F LDK+GDG ++FEE +K + Q
Sbjct: 49 ELFEELDKNGDGEVSFEEFQVLVKKISQ 76
>pdb|4ICB|A Chain A, Proline Cis-Trans Isomers In Calbindin D9k Observed By
X- Ray Crystallography
Length = 76
Score = 29.6 bits (65), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 21 EAFSMLDKDGDGCITFEELASAIKSLDQ 48
E F LDK+GDG ++FEE +K + Q
Sbjct: 49 ELFEELDKNGDGEVSFEEFQVLVKKISQ 76
>pdb|1N65|A Chain A, Family Of Nmr Solution Structures Of Ca Ce Calbindin D9k
In Denaturating Conditions
Length = 75
Score = 29.6 bits (65), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 21 EAFSMLDKDGDGCITFEELASAIKSLDQ 48
E F LDK+GDG ++FEE +K + Q
Sbjct: 48 ELFEELDKNGDGEVSFEEFQVLVKKISQ 75
>pdb|1IG5|A Chain A, Bovine Calbindin D9k Binding Mg2+
pdb|1IGV|A Chain A, Bovine Calbindin D9k Binding Mn2+
pdb|3ICB|A Chain A, The Refined Structure Of Vitamin D-Dependent Calcium-
Binding Protein From Bovine Intestine. Molecular
Details, Ion Binding, And Implications For The
Structure Of Other Calcium-Binding Proteins
Length = 75
Score = 29.6 bits (65), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 21 EAFSMLDKDGDGCITFEELASAIKSLDQ 48
E F LDK+GDG ++FEE +K + Q
Sbjct: 48 ELFEELDKNGDGEVSFEEFQVLVKKISQ 75
Score = 25.8 bits (55), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 19/25 (76%)
Query: 128 LEQMILEADSDGDGQVNYEEFARMM 152
L+++ E D +GDG+V++EEF ++
Sbjct: 46 LDELFEELDKNGDGEVSFEEFQVLV 70
>pdb|1C07|A Chain A, Structure Of The Third Eps15 Homology Domain Of Human
Eps15
Length = 95
Score = 29.6 bits (65), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 94 EAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEFA 149
E F DKD DG++S E+R + + G L L + D+ G+++ ++FA
Sbjct: 14 EIFLKTDKDMDGFVSGLEVREIFLKTG--LPSTLLAHIWSLCDTKDCGKLSKDQFA 67
>pdb|1KCY|A Chain A, Nmr Solution Structure Of Apo Calbindin D9k (F36g + P43m
Mutant)
Length = 75
Score = 29.3 bits (64), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 21 EAFSMLDKDGDGCITFEELASAIKSLDQ 48
E F LDK+GDG ++FEE +K + Q
Sbjct: 48 ELFEELDKNGDGEVSFEEFQVLVKKISQ 75
>pdb|1CDN|A Chain A, Solution Structure Of (Cd2+)1-Calbindin D9k Reveals
Details Of The Stepwise Structural Changes Along The
Apo--> (Ca2+) Ii1--> (Ca2+)i,Ii2 Binding Pathway
pdb|1CLB|A Chain A, Determination Of The Solution Structure Of Apo Calbindin
D9k By Nmr Spectroscopy
pdb|2BCA|A Chain A, High-Resolution Solution Structure Of Calcium-Loaded
Calbindin D9k
Length = 76
Score = 29.3 bits (64), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 21 EAFSMLDKDGDGCITFEELASAIKSLDQ 48
E F LDK+GDG ++FEE +K + Q
Sbjct: 49 ELFEELDKNGDGEVSFEEFQVLVKKISQ 76
>pdb|2BCB|A Chain A, High-Resolution Solution Structure Of Calcium-Loaded
Calbindin D9k
pdb|1B1G|A Chain A, Solvated Refinement Of Ca-Loaded Calbindin D9k
Length = 75
Score = 29.3 bits (64), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 21 EAFSMLDKDGDGCITFEELASAIKSLDQ 48
E F LDK+GDG ++FEE +K + Q
Sbjct: 48 ELFEELDKNGDGEVSFEEFQVLVKKISQ 75
>pdb|1KSM|A Chain A, Average Nmr Solution Structure Of Ca Ln Calbindin D9k
pdb|1KQV|A Chain A, Family Of Nmr Solution Structures Of Ca Ln Calbindin D9k
Length = 79
Score = 29.3 bits (64), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 21 EAFSMLDKDGDGCITFEELASAIKSLDQ 48
E F LDK+GDG ++FEE +K + Q
Sbjct: 52 ELFEELDKNGDGEVSFEEFQVLVKKISQ 79
>pdb|1BOC|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 76
Score = 29.3 bits (64), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 21 EAFSMLDKDGDGCITFEELASAIKSLDQ 48
E F LDK+GDG ++FEE +K + Q
Sbjct: 49 ELFEELDKNGDGEVSFEEFQVLVKKISQ 76
>pdb|1BOD|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 74
Score = 29.3 bits (64), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 21 EAFSMLDKDGDGCITFEELASAIKSLDQ 48
E F LDK+GDG ++FEE +K + Q
Sbjct: 47 ELFEELDKNGDGEVSFEEFQVLVKKISQ 74
Score = 27.7 bits (60), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 87 EAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTD--EELEQMILEADSDGDGQVN 144
++ EELK F+ +DK+ DG +S EL+ ++ L L+++ E D +GDG+V+
Sbjct: 2 KSPEELKGIFEKYDKEGDGQLSKEELKLLLQTEFPSLLKGMSTLDELFEELDKNGDGEVS 61
Query: 145 YEEFARMM 152
+EEF ++
Sbjct: 62 FEEFQVLV 69
>pdb|1CB1|A Chain A, Three-Dimensional Solution Structure Of Ca2+-Loaded
Porcine Calbindin D9k Determined By Nuclear Magnetic
Resonance Spectroscopy
Length = 78
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 23 FSMLDKDGDGCITFEELASAIKSLDQ 48
F LDK+GDG ++FEE +K + Q
Sbjct: 53 FQELDKNGDGEVSFEEFQVLVKKISQ 78
Score = 27.3 bits (59), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 24/69 (34%)
Query: 108 SPNELRHVMMNLGEK------LTDEELEQMIL------------------EADSDGDGQV 143
SP EL+ + K L+ EEL+Q+I E D +GDG+V
Sbjct: 5 SPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEV 64
Query: 144 NYEEFARMM 152
++EEF ++
Sbjct: 65 SFEEFQVLV 73
>pdb|1WLZ|A Chain A, Crystal Structure Of Djbp Fragment Which Was Obtained By
Limited Proteolysis
pdb|1WLZ|B Chain B, Crystal Structure Of Djbp Fragment Which Was Obtained By
Limited Proteolysis
pdb|1WLZ|C Chain C, Crystal Structure Of Djbp Fragment Which Was Obtained By
Limited Proteolysis
pdb|1WLZ|D Chain D, Crystal Structure Of Djbp Fragment Which Was Obtained By
Limited Proteolysis
Length = 105
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 29/57 (50%)
Query: 92 LKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEF 148
+ + F+ FD + IS E R + + LTDE+ +++ E + G++ Y +F
Sbjct: 26 ITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDF 82
>pdb|1MHO|A Chain A, The 2.0 A Structure Of Holo S100b From Bovine Brain
Length = 88
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 27/40 (67%), Gaps = 5/40 (12%)
Query: 110 NELRHVMMNLGEKLTDEELEQMILEA-DSDGDGQVNYEEF 148
NEL H + E++ ++E+ ++E DSDGDG+ +++EF
Sbjct: 38 NELSHFL----EEIKEQEVVDKVMETLDSDGDGECDFQEF 73
>pdb|2ZBK|B Chain B, Crystal Structure Of An Intact Type Ii Dna Topoisomerase:
Insights Into Dna Transfer Mechanisms
pdb|2ZBK|D Chain D, Crystal Structure Of An Intact Type Ii Dna Topoisomerase:
Insights Into Dna Transfer Mechanisms
pdb|2ZBK|F Chain F, Crystal Structure Of An Intact Type Ii Dna Topoisomerase:
Insights Into Dna Transfer Mechanisms
pdb|2ZBK|H Chain H, Crystal Structure Of An Intact Type Ii Dna Topoisomerase:
Insights Into Dna Transfer Mechanisms
Length = 530
Score = 28.5 bits (62), Expect = 1.5, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 37 EELASAIKSLDQNPTEEELRNMINEVDLDGNGTIE-FLEFLKLMATKMKENEAQEELKEA 95
EE+ I +L ++ T +E ++NE G+ T + LE L K +N +EE+
Sbjct: 239 EEIKILINNLKRDYTIKEF--LVNEFQSIGDTTADKILELAGLKPNKKVKNLTEEEITRL 296
Query: 96 FKVFDKDQDGYISPN 110
+ F KD+D + SP+
Sbjct: 297 VETFKKDED-FRSPS 310
>pdb|4FQO|A Chain A, Crystal Structure Of Calcium-loaded S100b Bound To Sbi4211
Length = 89
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 27/40 (67%), Gaps = 5/40 (12%)
Query: 110 NELRHVMMNLGEKLTDEELEQMILEA-DSDGDGQVNYEEF 148
NEL H + E++ ++E+ ++E DSDGDG+ +++EF
Sbjct: 39 NELSHFL----EEIKEQEVVDKVMETLDSDGDGECDFQEF 74
>pdb|3LK0|A Chain A, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK0|B Chain B, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK0|C Chain C, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK0|D Chain D, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK1|A Chain A, X-Ray Structure Of Bovine Sc0322,Ca(2+)-S100b
Length = 90
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 27/40 (67%), Gaps = 5/40 (12%)
Query: 110 NELRHVMMNLGEKLTDEELEQMILEA-DSDGDGQVNYEEF 148
NEL H + E++ ++E+ ++E DSDGDG+ +++EF
Sbjct: 39 NELSHFL----EEIKEQEVVDKVMETLDSDGDGECDFQEF 74
>pdb|1CFP|A Chain A, S100b (S100beta) Nmr Data Was Collected From A Sample Of
Calcium Free Protein At Ph 6.3 And A Temperature Of 311
K And 1.7-6.9 Mm Concentration, 25 Structures
pdb|1CFP|B Chain B, S100b (S100beta) Nmr Data Was Collected From A Sample Of
Calcium Free Protein At Ph 6.3 And A Temperature Of 311
K And 1.7-6.9 Mm Concentration, 25 Structures
pdb|3CR2|A Chain A, X-ray Structure Of Bovine Zn(2+),ca(2+)-s100b
pdb|3CR5|X Chain X, X-Ray Structure Of Bovine Pnt-Zn(2+),Ca(2+)-S100b
pdb|3CR4|X Chain X, X-Ray Structure Of Bovine Pnt,Ca(2+)-S100b
pdb|3GK1|A Chain A, X-Ray Structure Of Bovine Sbi132,Ca(2+)-S100b
pdb|3GK2|A Chain A, X-Ray Structure Of Bovine Sbi279,Ca(2+)-S100b
pdb|3GK4|X Chain X, X-Ray Structure Of Bovine Sbi523,Ca(2+)-S100b
pdb|3IQO|A Chain A, 1.5 Angstrom X-ray Structure Of Bovine Ca(2+)-s100b
pdb|3IQO|B Chain B, 1.5 Angstrom X-ray Structure Of Bovine Ca(2+)-s100b
pdb|3IQQ|A Chain A, X-Ray Structure Of Bovine Trtk12-Ca(2+)-S100b
pdb|3LLE|A Chain A, X-Ray Structure Of Bovine Sc0322,Ca(2+)-S100b
pdb|3LLE|B Chain B, X-Ray Structure Of Bovine Sc0322,Ca(2+)-S100b
Length = 92
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 27/40 (67%), Gaps = 5/40 (12%)
Query: 110 NELRHVMMNLGEKLTDEELEQMILEA-DSDGDGQVNYEEF 148
NEL H + E++ ++E+ ++E DSDGDG+ +++EF
Sbjct: 39 NELSHFL----EEIKEQEVVDKVMETLDSDGDGECDFQEF 74
>pdb|1PSB|A Chain A, Solution Structure Of Calcium Loaded S100b Complexed To A
Peptide From N-Terminal Regulatory Domain Of Ndr Kinase.
pdb|1PSB|B Chain B, Solution Structure Of Calcium Loaded S100b Complexed To A
Peptide From N-Terminal Regulatory Domain Of Ndr Kinase
Length = 91
Score = 28.5 bits (62), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 27/40 (67%), Gaps = 5/40 (12%)
Query: 110 NELRHVMMNLGEKLTDEELEQMILEA-DSDGDGQVNYEEF 148
NEL H + E++ ++E+ ++E DSDGDG+ +++EF
Sbjct: 38 NELSHFL----EEIKEQEVVDKVMETLDSDGDGECDFQEF 73
>pdb|4GXT|A Chain A, The Crystal Structure Of A Conserved Functionally Unknown
Protein From Anaerococcus Prevotii Dsm 20548
Length = 385
Score = 28.5 bits (62), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Query: 72 FLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNE---LRHVMMNLGEKLTDEEL 128
+L KL+A K+NEA + F VFD D I E L + + N+ K EE
Sbjct: 18 YLAINKLIAKHGKDNEAYNPDNKPFAVFDWDNTSIIGDVEEALLYYXVRNVSFKXDPEEF 77
Query: 129 EQMI 132
++I
Sbjct: 78 YELI 81
>pdb|1D1O|A Chain A, Cooperativity In Ef-Hand Ca2+-Binding Proteins: Evidence
Of Site-Site Communication From Binding-Induced Changes
In Structure And Dynamics Of N56a Calbindin D9k
Length = 75
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 21 EAFSMLDKDGDGCITFEELASAIKSLDQ 48
E F LDK GDG ++FEE +K + Q
Sbjct: 48 ELFEELDKAGDGEVSFEEFQVLVKKISQ 75
>pdb|1K96|A Chain A, Crystal Structure Of Calcium Bound Human S100a6
pdb|1K9K|A Chain A, Crystal Structure Of Calcium Bound Human S100a6
pdb|1K9K|B Chain B, Crystal Structure Of Calcium Bound Human S100a6
pdb|1K9P|A Chain A, Crystal Structure Of Calcium Free (or Apo) Human S100a6
Length = 90
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 107 ISPNELRHVM---MNLGEKLTDEELEQMILEADSDGDGQVNYEEFARMM 152
+S EL+ ++ + +G KL D E+ +++ + D + D +VN++E+ +
Sbjct: 29 LSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFL 77
>pdb|3VSK|A Chain A, Crystal Structure Of Penicillin-Binding Protein 3 (Pbp3)
From Methicilin-Resistant Staphylococcus Aureus In The
Apo Form.
pdb|3VSK|B Chain B, Crystal Structure Of Penicillin-Binding Protein 3 (Pbp3)
From Methicilin-Resistant Staphylococcus Aureus In The
Apo Form.
pdb|3VSL|A Chain A, Crystal Structure Of Penicillin-Binding Protein 3 (Pbp3)
From Methicilin-Resistant Staphylococcus Aureus In The
Cefotaxime Bound Form.
pdb|3VSL|B Chain B, Crystal Structure Of Penicillin-Binding Protein 3 (Pbp3)
From Methicilin-Resistant Staphylococcus Aureus In The
Cefotaxime Bound Form
Length = 646
Score = 28.1 bits (61), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 13 EDQIAEFQEAFSML--DKDGDGCITFEELASAIKSLDQNPTEEELRN 57
E +I + QE F M DKDG G ++F++ + + + + T E +N
Sbjct: 538 EKEIKQIQEGFKMAFNDKDGTGYVSFKD--TVVPTAGKTGTAEVFQN 582
>pdb|1XNF|A Chain A, Crystal Structure Of E.Coli Tpr-Protein Nlpi
pdb|1XNF|B Chain B, Crystal Structure Of E.Coli Tpr-Protein Nlpi
Length = 275
Score = 28.1 bits (61), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 75 FLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPNELRHVMMNLGEKLTDEELE 129
+L L K+ E +A+E LK+ F+ DK+Q G+ N + + N+ E+ E L+
Sbjct: 150 WLYLAEQKLDEKQAKEVLKQHFEKSDKEQWGW---NIVEFYLGNISEQTLXERLK 201
>pdb|1FF1|A Chain A, Structure Of The Second Eps15 Homology Domain Of Human
Eps15 In Complex With Ptgssstnpfl
Length = 95
Score = 28.1 bits (61), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 104 DGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEFARMMLLA 155
+G++S ++++ V++N KL + L ++ +D D DG ++ +EFA M L
Sbjct: 23 NGFLSGDKVKPVLLN--SKLPVDILGRVWELSDIDHDGMLDRDEFAVAMFLV 72
>pdb|1EH2|A Chain A, Structure Of The Second Eps15 Homology Domain Of Human
Eps15, Nmr, 20 Structures
Length = 106
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 104 DGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEFARMMLLA 155
+G++S ++++ V++N KL + L ++ +D D DG ++ +EFA M L
Sbjct: 28 NGFLSGDKVKPVLLN--SKLPVDILGRVWELSDIDHDGMLDRDEFAVAMFLV 77
>pdb|2JXC|A Chain A, Structure Of The Eps15-Eh2 Stonin2 Complex
Length = 100
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 104 DGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEFARMMLLA 155
+G++S ++++ V++N KL + L ++ +D D DG ++ +EFA M L
Sbjct: 28 NGFLSGDKVKPVLLN--SKLPVDILGRVWELSDIDHDGMLDRDEFAVAMFLV 77
>pdb|1F8H|A Chain A, Structure Of The Second Eps15 Homology Domain Of Human
Eps15 In Complex With Ptgssstnpfr
Length = 95
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 104 DGYISPNELRHVMMNLGEKLTDEELEQMILEADSDGDGQVNYEEFARMMLLA 155
+G++S ++++ V++N KL + L ++ +D D DG ++ +EFA M L
Sbjct: 23 NGFLSGDKVKPVLLN--SKLPVDILGRVWELSDIDHDGMLDRDEFAVAMFLV 72
>pdb|1K8U|A Chain A, Crystal Structure Of Calcium-Free (Or Apo) Human S100a6;
Cys3met Mutant (Selenomethionine Derivative)
Length = 90
Score = 27.3 bits (59), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 107 ISPNELRHVM---MNLGEKLTDEELEQMILEADSDGDGQVNYEEFARMM 152
+S EL+ ++ + +G KL D E+ ++ + D + D +VN++E+ +
Sbjct: 29 LSKKELKELIQKELTIGSKLQDAEIARLXEDLDRNKDQEVNFQEYVTFL 77
>pdb|3LKD|A Chain A, Crystal Structure Of The Type I Restriction-Modification
System Methyltransferase Subunit From Streptococcus
Thermophilus, Northeast Structural Genomics Consortium
Target Sur80
pdb|3LKD|B Chain B, Crystal Structure Of The Type I Restriction-Modification
System Methyltransferase Subunit From Streptococcus
Thermophilus, Northeast Structural Genomics Consortium
Target Sur80
Length = 542
Score = 26.9 bits (58), Expect = 4.1, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 36/77 (46%), Gaps = 11/77 (14%)
Query: 24 SMLDKDGDGCITFEELASAIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLKLMATKM 83
+++++ DG E+LA + ++Q ++E N+ ++DL KL AT
Sbjct: 103 ALVERVNDGSFQLEDLAQGFRDIEQ--SDELYENLFEDIDLYSK---------KLGATPQ 151
Query: 84 KENEAQEELKEAFKVFD 100
K+N+ + + V D
Sbjct: 152 KQNQTVAAVXKELAVLD 168
>pdb|3K28|A Chain A, Crystal Structure Of A Glutamate-1-Semialdehyde
Aminotransferase From Bacillus Anthracis With Bound
Pyridoxal 5'phosphate
pdb|3K28|B Chain B, Crystal Structure Of A Glutamate-1-Semialdehyde
Aminotransferase From Bacillus Anthracis With Bound
Pyridoxal 5'phosphate
pdb|3K28|C Chain C, Crystal Structure Of A Glutamate-1-Semialdehyde
Aminotransferase From Bacillus Anthracis With Bound
Pyridoxal 5'phosphate
pdb|3K28|D Chain D, Crystal Structure Of A Glutamate-1-Semialdehyde
Aminotransferase From Bacillus Anthracis With Bound
Pyridoxal 5'phosphate
Length = 429
Score = 26.9 bits (58), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Query: 42 AIKSLDQNPTEEELRNMINEVDLDGNGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDK 101
A KS+ NP E D+DGN I+++ L + A + + EA K +
Sbjct: 28 AFKSVGXNPLFXERGKGSKVYDIDGNEYIDYV----LSWGPLIHGHANDRVVEALKAVAE 83
Query: 102 DQDGYISPNELRHVMMNL 119
+ +P E+ + + L
Sbjct: 84 RGTSFGAPTEIENKLAKL 101
>pdb|3CS1|A Chain A, Flagellar Calcium-binding Protein (fcabp) From T. Cruzi
Length = 219
Score = 26.9 bits (58), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 7/35 (20%)
Query: 13 EDQIAEFQEAFSMLDKDGDGCITFEEL---ASAIK 44
ED A F+E LDK+G G +TF+E ASA+K
Sbjct: 167 EDPAALFKE----LDKNGTGSVTFDEFAAWASAVK 197
>pdb|4DUQ|A Chain A, The Structure Of Ca2+-Loaded S100a2 At 1.3a Resolution
pdb|4DUQ|B Chain B, The Structure Of Ca2+-Loaded S100a2 At 1.3a Resolution
Length = 98
Score = 26.9 bits (58), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 25/36 (69%)
Query: 119 LGEKLTDEELEQMILEADSDGDGQVNYEEFARMMLL 154
+GEK+ +E L++++ D + D QV+++E+A + L
Sbjct: 47 VGEKVDEEGLKKLMGSLDENSDQQVDFQEYAVFLAL 82
>pdb|2RGI|A Chain A, Crystal Structure Of Ca2+-Free S100a2 At 1.6 A Resolution
pdb|2RGI|B Chain B, Crystal Structure Of Ca2+-Free S100a2 At 1.6 A Resolution
Length = 98
Score = 26.9 bits (58), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 25/36 (69%)
Query: 119 LGEKLTDEELEQMILEADSDGDGQVNYEEFARMMLL 154
+GEK+ +E L++++ D + D QV+++E+A + L
Sbjct: 47 VGEKVDEEGLKKLMGSLDENSDQQVDFQEYAVFLAL 82
>pdb|2O7I|A Chain A, The X-Ray Crystal Structure Of A Thermophilic Cellobiose
Binding Protein Bound With Cellobiose
pdb|3I5O|A Chain A, The X-Ray Crystal Structure Of A Thermophilic Cellobiose
Binding Protein Bound With Cellopentaose
pdb|3I5O|B Chain B, The X-Ray Crystal Structure Of A Thermophilic Cellobiose
Binding Protein Bound With Cellopentaose
Length = 592
Score = 26.6 bits (57), Expect = 5.6, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Query: 66 GNGTIEFLEFLKLMATKMKENEAQEELKEAFKVFDKDQDGYISPN---ELRHVMMNLGEK 122
G G ++E++K + TK+ E +A+EE F+ P E MN+ +
Sbjct: 105 GGGWDTYIEYVKAVDTKVVEFKAKEENLNYFQFLSYSLGAQPMPKHVYERIRAQMNIKDW 164
Query: 123 LTDEELEQMI 132
+ D+ EQ++
Sbjct: 165 INDKPEEQVV 174
>pdb|1A03|A Chain A, The Three-Dimensional Structure Of Ca2+-Bound Calcyclin:
Implications For Ca2+-Signal Transduction By S100
Proteins, Nmr, 20 Structures
pdb|1A03|B Chain B, The Three-Dimensional Structure Of Ca2+-Bound Calcyclin:
Implications For Ca2+-Signal Transduction By S100
Proteins, Nmr, 20 Structures
pdb|1CNP|A Chain A, The Structure Of Calcyclin Reveals A Novel Homodimeric
Fold For S100 Ca2+-Binding Proteins, Nmr, 22 Structures
pdb|1CNP|B Chain B, The Structure Of Calcyclin Reveals A Novel Homodimeric
Fold For S100 Ca2+-Binding Proteins, Nmr, 22 Structures
pdb|1JWD|A Chain A, Ca2+-Induced Structural Changes In Calcyclin: High-
Resolution Solution Structure Of Ca2+-Bound Calcyclin.
pdb|1JWD|B Chain B, Ca2+-Induced Structural Changes In Calcyclin: High-
Resolution Solution Structure Of Ca2+-Bound Calcyclin.
pdb|2CNP|A Chain A, High Resolution Solution Structure Of Apo Rabbit
Calcyclin, Nmr, 22 Structures
pdb|2CNP|B Chain B, High Resolution Solution Structure Of Apo Rabbit
Calcyclin, Nmr, 22 Structures
pdb|2JTT|A Chain A, Solution Structure Of Calcium Loaded S100a6 Bound To C-
Terminal Siah-1 Interacting Protein
pdb|2JTT|B Chain B, Solution Structure Of Calcium Loaded S100a6 Bound To C-
Terminal Siah-1 Interacting Protein
Length = 90
Score = 26.6 bits (57), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 107 ISPNELRHVM---MNLGEKLTDEELEQMILEADSDGDGQVNYEEFARMM 152
+S EL+ ++ + +G KL D E+ +++ + D + D +VN++E+ +
Sbjct: 29 LSKKELKELIQKELTIGSKLQDAEIVKLMDDLDRNKDQEVNFQEYITFL 77
>pdb|1MQ1|A Chain A, Ca2+-S100b-Trtk-12 Complex
pdb|1MQ1|B Chain B, Ca2+-S100b-Trtk-12 Complex
pdb|1UWO|A Chain A, Calcium Form Of Human S100b, Nmr, 20 Structures
pdb|1UWO|B Chain B, Calcium Form Of Human S100b, Nmr, 20 Structures
pdb|2PRU|A Chain A, Nmr Structure Of Human Apos100b At 10c
pdb|2PRU|B Chain B, Nmr Structure Of Human Apos100b At 10c
Length = 91
Score = 26.6 bits (57), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 27/40 (67%), Gaps = 5/40 (12%)
Query: 110 NELRHVMMNLGEKLTDEELEQMILEA-DSDGDGQVNYEEF 148
NEL H + E++ ++E+ ++E D+DGDG+ +++EF
Sbjct: 38 NELSHFL----EEIKEQEVVDKVMETLDNDGDGECDFQEF 73
>pdb|2H61|C Chain C, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|D Chain D, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|G Chain G, X-ray Structure Of Human Ca2+-loaded S100b
pdb|3D0Y|A Chain A, Crystal Structure Of S100b In The Calcium And Zinc Loaded
State At Ph 6.5
Length = 92
Score = 26.6 bits (57), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 27/40 (67%), Gaps = 5/40 (12%)
Query: 110 NELRHVMMNLGEKLTDEELEQMILEA-DSDGDGQVNYEEF 148
NEL H + E++ ++E+ ++E D+DGDG+ +++EF
Sbjct: 39 NELSHFL----EEIKEQEVVDKVMETLDNDGDGECDFQEF 74
>pdb|2H61|A Chain A, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|B Chain B, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|E Chain E, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|F Chain F, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|H Chain H, X-ray Structure Of Human Ca2+-loaded S100b
pdb|3CZT|X Chain X, Crystal Structure Of S100b In The Calcium And Zinc Loaded
State At Ph 9
pdb|3D0Y|B Chain B, Crystal Structure Of S100b In The Calcium And Zinc Loaded
State At Ph 6.5
pdb|3D10|A Chain A, Crystal Structure Of S100b In The Calcium And Zinc Loaded
State At Ph 10.0
pdb|3D10|B Chain B, Crystal Structure Of S100b In The Calcium And Zinc Loaded
State At Ph 10.0
pdb|3HCM|A Chain A, Crystal Structure Of Human S100b In Complex With S45
pdb|3HCM|B Chain B, Crystal Structure Of Human S100b In Complex With S45
Length = 92
Score = 26.6 bits (57), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 27/40 (67%), Gaps = 5/40 (12%)
Query: 110 NELRHVMMNLGEKLTDEELEQMILEA-DSDGDGQVNYEEF 148
NEL H + E++ ++E+ ++E D+DGDG+ +++EF
Sbjct: 39 NELSHFL----EEIKEQEVVDKVMETLDNDGDGECDFQEF 74
>pdb|3RLZ|A Chain A, 2.0 Angstrom X-Ray Structure Of Bovine Ca(2+)-S100b D63n
pdb|3RLZ|B Chain B, 2.0 Angstrom X-Ray Structure Of Bovine Ca(2+)-S100b D63n
pdb|3RM1|A Chain A, 1.24 Angstrom X-Ray Structure Of Bovine
Trtk12-Ca(2+)-S100b D63n
Length = 92
Score = 26.6 bits (57), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 27/40 (67%), Gaps = 5/40 (12%)
Query: 110 NELRHVMMNLGEKLTDEELEQMILEA-DSDGDGQVNYEEF 148
NEL H + E++ ++E+ ++E DS+GDG+ +++EF
Sbjct: 39 NELSHFL----EEIKEQEVVDKVMETLDSNGDGECDFQEF 74
>pdb|2K7O|A Chain A, Ca2+-s100b, Refined With Rdcs
pdb|2K7O|B Chain B, Ca2+-s100b, Refined With Rdcs
Length = 91
Score = 26.2 bits (56), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 26/40 (65%), Gaps = 5/40 (12%)
Query: 110 NELRHVMMNLGEKLTDEELEQMILEA-DSDGDGQVNYEEF 148
NEL H + E++ ++E+ ++E D DGDG+ +++EF
Sbjct: 38 NELSHFL----EEIKEQEVVDKVMETLDEDGDGECDFQEF 73
>pdb|1SYM|A Chain A, 3-D Solution Structure Of Reduced Apo-S100b From Rat, Nmr,
20 Structures
pdb|1SYM|B Chain B, 3-D Solution Structure Of Reduced Apo-S100b From Rat, Nmr,
20 Structures
pdb|1QLK|A Chain A, Solution Structure Of Ca(2+)-Loaded Rat S100b (Betabeta)
Nmr, 20 Structures
pdb|1QLK|B Chain B, Solution Structure Of Ca(2+)-Loaded Rat S100b (Betabeta)
Nmr, 20 Structures
pdb|1B4C|A Chain A, Solution Structure Of Rat Apo-S100b Using Dipolar
Couplings
pdb|1B4C|B Chain B, Solution Structure Of Rat Apo-S100b Using Dipolar
Couplings
pdb|1DT7|A Chain A, Solution Structure Of The C-Terminal Negative Regulatory
Domain Of P53 In A Complex With Ca2+-Bound S100b(Bb)
pdb|1DT7|B Chain B, Solution Structure Of The C-Terminal Negative Regulatory
Domain Of P53 In A Complex With Ca2+-Bound S100b(Bb)
pdb|1MWN|A Chain A, Solution Nmr Structure Of S100b Bound To The High-Affinity
Target Peptide Trtk-12
pdb|1MWN|B Chain B, Solution Nmr Structure Of S100b Bound To The High-Affinity
Target Peptide Trtk-12
pdb|1XYD|A Chain A, Nmr Solution Structure Of Rat Zinc-Calcium-S100b, 20
Structures
pdb|1XYD|B Chain B, Nmr Solution Structure Of Rat Zinc-Calcium-S100b, 20
Structures
Length = 92
Score = 26.2 bits (56), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 26/40 (65%), Gaps = 5/40 (12%)
Query: 110 NELRHVMMNLGEKLTDEELEQMILEA-DSDGDGQVNYEEF 148
NEL H + E++ ++E+ ++E D DGDG+ +++EF
Sbjct: 39 NELSHFL----EEIKEQEVVDKVMETLDEDGDGECDFQEF 74
>pdb|4GWP|B Chain B, Structure Of The Mediator Head Module From S. Cerevisiae
pdb|4GWQ|B Chain B, Structure Of The Mediator Head Module From S. Cerevisiae
In Complex With The Carboxy-Terminal Domain (Ctd) Of Rna
Polymerase Ii Rpb1 Subunit
Length = 687
Score = 25.8 bits (55), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 38/77 (49%), Gaps = 9/77 (11%)
Query: 56 RNMINEVDLDGNGTIEFLEFLKLMATKMKENEAQEELKEAFK------VFDKDQDGYISP 109
R+M+ ++L N + LEF+ L+ + +KE+ + + + D+ Y++P
Sbjct: 205 RDMLEHINLAMNESSLALEFVSLLLSSVKESTGMSSMSPFLRKVVKPSSLNSDKIPYVAP 264
Query: 110 NELRHV---MMNLGEKL 123
+ ++ ++N G KL
Sbjct: 265 TKKEYIELDILNKGWKL 281
>pdb|1QLS|A Chain A, S100c (S100a11),Or Calgizzarin, In Complex With Annexin
I N-Terminus
Length = 99
Score = 25.8 bits (55), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 55 LRNMINEVDLDGNGTIEFLEFLKLMA 80
L M+ ++DLD +G ++F EFL L+
Sbjct: 58 LDRMMKKLDLDSDGQLDFQEFLNLIG 83
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.312 0.132 0.354
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,694,409
Number of Sequences: 62578
Number of extensions: 193603
Number of successful extensions: 2235
Number of sequences better than 100.0: 400
Number of HSP's better than 100.0 without gapping: 341
Number of HSP's successfully gapped in prelim test: 59
Number of HSP's that attempted gapping in prelim test: 624
Number of HSP's gapped (non-prelim): 833
length of query: 156
length of database: 14,973,337
effective HSP length: 91
effective length of query: 65
effective length of database: 9,278,739
effective search space: 603118035
effective search space used: 603118035
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 47 (22.7 bits)