Your job contains 1 sequence.
>031617
MGSDSEAERTPHKDEKKKIVSLAPIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVK
SIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLV
LTKPTKGELGQEEQDKLKADYTLVVEDVKELASSLF
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 031617
(156 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2181514 - symbol:AT5G08180 species:3702 "Arabi... 590 2.2e-57 1
CGD|CAL0000123 - symbol:NHP2 species:5476 "Candida albica... 368 7.4e-34 1
SGD|S000002367 - symbol:NHP2 "Protein related to mammalia... 366 1.2e-33 1
POMBASE|SPAC1782.10c - symbol:nhp2 "box H/ACA snoRNP comp... 343 3.3e-31 1
UNIPROTKB|F1NNP9 - symbol:NHP2 "Uncharacterized protein" ... 312 6.4e-28 1
UNIPROTKB|Q6P8C4 - symbol:nhp2 "H/ACA ribonucleoprotein c... 308 1.7e-27 1
UNIPROTKB|Q6NTV9 - symbol:nhp2 "H/ACA ribonucleoprotein c... 305 3.5e-27 1
UNIPROTKB|Q60YI3 - symbol:CBG18231 "Putative H/ACA ribonu... 300 1.2e-26 1
WB|WBGene00012964 - symbol:Y48A6B.3 species:6239 "Caenorh... 299 1.5e-26 1
UNIPROTKB|Q9XXD4 - symbol:Y48A6B.3 "Putative H/ACA ribonu... 299 1.5e-26 1
ASPGD|ASPL0000056326 - symbol:AN0695 species:162425 "Emer... 298 1.9e-26 1
MGI|MGI:1098547 - symbol:Nhp2 "NHP2 ribonucleoprotein" sp... 297 2.5e-26 1
UNIPROTKB|Q8I7X7 - symbol:Q8I7X7 "H/ACA ribonucleoprotein... 291 1.1e-25 1
DICTYBASE|DDB_G0289699 - symbol:nola2 "ribosomal protein ... 288 2.2e-25 1
UNIPROTKB|Q5E950 - symbol:NHP2 "H/ACA ribonucleoprotein c... 287 2.9e-25 1
UNIPROTKB|E2QYZ9 - symbol:NHP2 "Uncharacterized protein" ... 287 2.9e-25 1
ZFIN|ZDB-GENE-030131-533 - symbol:nhp2 "NHP2 ribonucleopr... 285 4.6e-25 1
UNIPROTKB|Q9NX24 - symbol:NHP2 "H/ACA ribonucleoprotein c... 283 7.6e-25 1
UNIPROTKB|Q5RC65 - symbol:NHP2 "H/ACA ribonucleoprotein c... 282 9.7e-25 1
UNIPROTKB|F1S3E3 - symbol:NHP2 "Uncharacterized protein" ... 281 1.2e-24 1
FB|FBgn0029148 - symbol:NHP2 "NHP2" species:7227 "Drosoph... 271 1.4e-23 1
UNIPROTKB|Q6XIP0 - symbol:NHP2 "H/ACA ribonucleoprotein c... 271 1.4e-23 1
UNIPROTKB|G4N4M3 - symbol:MGG_05999 "H/ACA ribonucleoprot... 248 3.9e-21 1
RGD|1309435 - symbol:Nhp2 "NHP2 ribonucleoprotein" specie... 233 1.5e-19 1
UNIPROTKB|D6RC52 - symbol:NHP2 "H/ACA ribonucleoprotein c... 230 3.1e-19 1
UNIPROTKB|D6RCB9 - symbol:NHP2 "H/ACA ribonucleoprotein c... 230 3.1e-19 1
POMBASE|SPAC607.03c - symbol:snu13 "U3 snoRNP-associated ... 208 6.7e-17 1
ZFIN|ZDB-GENE-040426-879 - symbol:nhp2l1a "NHP2 non-histo... 207 8.6e-17 1
WB|WBGene00010896 - symbol:M28.5 species:6239 "Caenorhabd... 205 1.4e-16 1
ZFIN|ZDB-GENE-030131-9670 - symbol:nhp2l1b "NHP2 non-hist... 204 1.8e-16 1
ASPGD|ASPL0000057404 - symbol:AN1319 species:162425 "Emer... 201 3.7e-16 1
FB|FBgn0015393 - symbol:hoip "hoi-polloi" species:7227 "D... 200 4.7e-16 1
UNIPROTKB|Q3B8S0 - symbol:NHP2L1 "NHP2-like protein 1" sp... 200 4.7e-16 1
UNIPROTKB|E2RRM7 - symbol:NHP2L1 "Uncharacterized protein... 200 4.7e-16 1
UNIPROTKB|B1AHD1 - symbol:NHP2L1 "NHP2-like protein 1" sp... 200 4.7e-16 1
UNIPROTKB|P55769 - symbol:NHP2L1 "NHP2-like protein 1" sp... 200 4.7e-16 1
UNIPROTKB|F2Z5V3 - symbol:NHP2L1 "Uncharacterized protein... 200 4.7e-16 1
RGD|1303103 - symbol:Nhp2l1 "NHP2 non-histone chromosome ... 200 4.7e-16 1
GENEDB_PFALCIPARUM|PF11_0250 - symbol:PF11_0250 "high mob... 199 6.0e-16 1
UNIPROTKB|Q8IIC4 - symbol:PF11_0250 "High mobility group-... 199 6.0e-16 1
UNIPROTKB|F1NII6 - symbol:NHP2L1 "Uncharacterized protein... 198 7.7e-16 1
UNIPROTKB|J9P8E9 - symbol:LOC609886 "Uncharacterized prot... 192 3.3e-15 1
RGD|1566078 - symbol:RGD1566078 "similar to NHP2-like pro... 192 3.3e-15 1
GENEDB_PFALCIPARUM|PFD0960c - symbol:PFD0960c "ribosomal ... 158 1.2e-14 2
UNIPROTKB|Q8I1P0 - symbol:PFD0960c "60S ribosomal protein... 158 1.2e-14 2
DICTYBASE|DDB_G0282243 - symbol:nhp2l1 "non-histone chrom... 186 1.4e-14 1
SGD|S000000752 - symbol:SNU13 "RNA binding protein" speci... 185 1.8e-14 1
TAIR|locus:2127455 - symbol:AT4G22380 species:3702 "Arabi... 184 2.3e-14 1
CGD|CAL0002459 - symbol:orf19.5885 species:5476 "Candida ... 179 7.9e-14 1
TAIR|locus:2149269 - symbol:AT5G20160 species:3702 "Arabi... 119 2.1e-13 2
UNIPROTKB|P54066 - symbol:rpl7ae "50S ribosomal protein L... 173 3.4e-13 1
UNIPROTKB|G4MRY0 - symbol:MGG_02467 "Ribonucleoprotein-as... 171 5.6e-13 1
UNIPROTKB|J3QSY4 - symbol:NHP2 "H/ACA ribonucleoprotein c... 127 2.6e-08 1
UNIPROTKB|J9NTQ4 - symbol:NHP2L1 "Uncharacterized protein... 123 6.8e-08 1
FB|FBgn0014026 - symbol:RpL7A "Ribosomal protein L7A" spe... 120 4.6e-07 1
GENEDB_PFALCIPARUM|PF14_0231 - symbol:PF14_0231 "ribosoma... 112 7.5e-07 2
UNIPROTKB|Q8ILL2 - symbol:PF14_0231 "60S ribosomal protei... 112 7.5e-07 2
DICTYBASE|DDB_G0277629 - symbol:rpl7a "60S ribosomal prot... 118 8.7e-07 1
UNIPROTKB|F1M289 - symbol:F1M289 "Uncharacterized protein... 102 1.2e-05 1
UNIPROTKB|Q29375 - symbol:RPL7A "60S ribosomal protein L7... 100 1.9e-05 1
UNIPROTKB|F2Z4L5 - symbol:RPL7A "60S ribosomal protein L7... 110 3.4e-05 1
UNIPROTKB|P32429 - symbol:RPL7A "60S ribosomal protein L7... 110 3.4e-05 1
UNIPROTKB|F1NHA8 - symbol:RPL7A "60S ribosomal protein L7... 110 3.5e-05 1
WB|WBGene00004481 - symbol:rps-12 species:6239 "Caenorhab... 99 7.5e-05 1
UNIPROTKB|Q5T8U2 - symbol:RPL7A "60S ribosomal protein L7... 100 0.00017 1
TAIR|locus:2062057 - symbol:AT2G47610 species:3702 "Arabi... 106 0.00018 1
POMBASE|SPBC1685.02c - symbol:rps1202 "40S ribosomal prot... 99 0.00020 1
RGD|1595463 - symbol:LOC680161 "similar to 60S ribosomal ... 105 0.00026 1
POMBASE|SPBC29A3.04 - symbol:rpl8 "60S ribosomal protein ... 99 0.00028 2
TAIR|locus:2081715 - symbol:AT3G62870 species:3702 "Arabi... 104 0.00036 1
RGD|1559149 - symbol:RGD1559149 "sim to 60S ribosomal pro... 104 0.00038 1
WB|WBGene00004419 - symbol:rpl-7A species:6239 "Caenorhab... 104 0.00039 1
RGD|1562953 - symbol:RGD1562953 "similar to Rpl7a protein... 104 0.00040 1
UNIPROTKB|Q2MHD3 - symbol:RPL7A "60S ribosomal protein L7... 85 0.00087 1
>TAIR|locus:2181514 [details] [associations]
symbol:AT5G08180 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0001510
"RNA methylation" evidence=RCA] [GO:0009165 "nucleotide
biosynthetic process" evidence=RCA] [GO:0009909 "regulation of
flower development" evidence=RCA] [GO:0034968 "histone lysine
methylation" evidence=RCA] InterPro:IPR002415 PRINTS:PR00883
PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 GO:GO:0030515 EMBL:AL357612
GO:GO:0031118 GO:GO:0005732 eggNOG:COG1358 InterPro:IPR018492
PRINTS:PR00881 EMBL:AY050477 EMBL:AF378885 IPI:IPI00539022
PIR:T50503 RefSeq:NP_001190260.1 RefSeq:NP_196435.1 UniGene:At.5453
ProteinModelPortal:Q9LEY9 SMR:Q9LEY9 STRING:Q9LEY9 PaxDb:Q9LEY9
PRIDE:Q9LEY9 EnsemblPlants:AT5G08180.1 EnsemblPlants:AT5G08180.2
GeneID:830714 KEGG:ath:AT5G08180 TAIR:At5g08180
HOGENOM:HOG000055227 InParanoid:Q9LEY9 KO:K11129 OMA:TCCVLVM
PhylomeDB:Q9LEY9 ProtClustDB:CLSN2687267 Genevestigator:Q9LEY9
GermOnline:AT5G08180 Uniprot:Q9LEY9
Length = 156
Score = 590 (212.7 bits), Expect = 2.2e-57, P = 2.2e-57
Identities = 113/155 (72%), Positives = 133/155 (85%)
Query: 1 MGSDSEAERTPHKDEKKKIVSLAPIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVK 60
MGSD+EAE++ K++KK ++LAPIAKPLAGKKL KRT KL+++AA KCLKRGVKEVVK
Sbjct: 1 MGSDTEAEKSIQKEKKKYAITLAPIAKPLAGKKLQKRTFKLIQKAAGKKCLKRGVKEVVK 60
Query: 61 SIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLV 120
SIRRG KGLCVIAGNISPIDVITH+PILCEE+ +PY+YV SKEDLA AGATKRPTCCVLV
Sbjct: 61 SIRRGQKGLCVIAGNISPIDVITHLPILCEEAGVPYVYVPSKEDLAQAGATKRPTCCVLV 120
Query: 121 LTKPTKGELGQEEQDKLKADYTLVVEDVKELASSL 155
+ KP KG+L EE KLK DY V +D+KELA+S+
Sbjct: 121 MLKPAKGDLTAEELAKLKTDYEQVSDDIKELATSV 155
>CGD|CAL0000123 [details] [associations]
symbol:NHP2 species:5476 "Candida albicans" [GO:0031429 "box
H/ACA snoRNP complex" evidence=IEA] [GO:0034513 "box H/ACA snoRNA
binding" evidence=IEA] [GO:0031120 "snRNA pseudouridine synthesis"
evidence=IEA] [GO:0000469 "cleavage involved in rRNA processing"
evidence=IEA] [GO:0031118 "rRNA pseudouridine synthesis"
evidence=IEA] InterPro:IPR002415 PRINTS:PR00883 CGD:CAL0000123
InterPro:IPR004038 Pfam:PF01248 GO:GO:0005730 GO:GO:0003723
EMBL:AACQ01000055 EMBL:AACQ01000054 eggNOG:COG1358
InterPro:IPR018492 PRINTS:PR00881 KO:K11129 RefSeq:XP_717389.1
RefSeq:XP_717481.1 ProteinModelPortal:Q5A6M9 STRING:Q5A6M9
GeneID:3640872 GeneID:3641003 KEGG:cal:CaO19.526
KEGG:cal:CaO19.8159 Uniprot:Q5A6M9
Length = 159
Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
Identities = 70/155 (45%), Positives = 111/155 (71%)
Query: 1 MGSDSEAERTPHKDE-------KKKIVSLAPIAKPLAGKKLSKRTLKLVRRAAEHKCLKR 53
MGS E++ D+ +K++ ++ P AKPLA KKL+K+ LK V++A++ K +KR
Sbjct: 1 MGSKKESKSKSSSDDVSTEDNYEKRMSAVLPFAKPLASKKLNKKILKTVKKASKAKHVKR 60
Query: 54 GVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKR 113
GVKEVVKS+R+G KGL +IAG+ISP DVI+H+P+LCE++ + YI++ SKEDL +AGATKR
Sbjct: 61 GVKEVVKSLRKGEKGLVIIAGDISPADVISHIPVLCEDNSVAYIFIPSKEDLGSAGATKR 120
Query: 114 PTCCVLVLTKPTKGELGQEEQDKLKADYTLVVEDV 148
PT CV+++ K + ++ D+ + + +V+++
Sbjct: 121 PTSCVMIVPGGGKSKKNADKTDEYRDGFDDIVKEI 155
>SGD|S000002367 [details] [associations]
symbol:NHP2 "Protein related to mammalian high mobility group
(HMG) proteins" species:4932 "Saccharomyces cerevisiae" [GO:0000469
"cleavage involved in rRNA processing" evidence=IMP] [GO:0031118
"rRNA pseudouridine synthesis" evidence=IMP] [GO:0031120 "snRNA
pseudouridine synthesis" evidence=IMP;IDA] [GO:0030515 "snoRNA
binding" evidence=IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0031429 "box H/ACA snoRNP
complex" evidence=IPI] InterPro:IPR002415 InterPro:IPR004037
PRINTS:PR00883 PROSITE:PS01082 SGD:S000002367 InterPro:IPR004038
Pfam:PF01248 GO:GO:0030515 EMBL:BK006938 EMBL:X99000 GO:GO:0031429
GO:GO:0031118 GO:GO:0031120 eggNOG:COG1358 InterPro:IPR018492
PRINTS:PR00881 HOGENOM:HOG000055227 KO:K11129
GeneTree:ENSGT00550000074939 OMA:HLPAVCE OrthoDB:EOG473T1W
EMBL:X57714 EMBL:Z74256 PIR:S67767 RefSeq:NP_010073.2 PDB:2LBW
PDB:2LBX PDBsum:2LBW PDBsum:2LBX ProteinModelPortal:P32495
SMR:P32495 DIP:DIP-5134N IntAct:P32495 MINT:MINT-501968
STRING:P32495 PaxDb:P32495 PeptideAtlas:P32495 EnsemblFungi:YDL208W
GeneID:851319 KEGG:sce:YDL208W CYGD:YDL208w
EvolutionaryTrace:P32495 NextBio:968357 Genevestigator:P32495
GermOnline:YDL208W GO:GO:0000469 Uniprot:P32495
Length = 156
Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 73/157 (46%), Positives = 111/157 (70%)
Query: 1 MGSDSEAERTPHKDEKK------KIVSLAPIAKPLAGKKLSKRTLKLVRRAAEHKCLKRG 54
MG D++ E K+ K ++ ++ P AKPLA KKL+K+ LK V++A++ K +KRG
Sbjct: 1 MGKDNK-EHKESKESKTVDNYEARMPAVLPFAKPLASKKLNKKVLKTVKKASKAKNVKRG 59
Query: 55 VKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRP 114
VKEVVK++R+G KGL VIAG+ISP DVI+H+P+LCE+ +PYI++ SK+DL AGATKRP
Sbjct: 60 VKEVVKALRKGEKGLVVIAGDISPADVISHIPVLCEDHSVPYIFIPSKQDLGAAGATKRP 119
Query: 115 TCCVLVLTKPTKGELGQEEQDKLKADYTLVVEDVKEL 151
T V ++ K + G+ ++++ K + VV++V+ L
Sbjct: 120 TSVVFIVPGSNKKKDGKNKEEEYKESFNEVVKEVQAL 156
>POMBASE|SPAC1782.10c [details] [associations]
symbol:nhp2 "box H/ACA snoRNP complex subunit Nhp2"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005732
"small nucleolar ribonucleoprotein complex" evidence=ISS]
[GO:0006364 "rRNA processing" evidence=ISO] [GO:0019843 "rRNA
binding" evidence=IC] [GO:0030515 "snoRNA binding" evidence=ISS]
[GO:0031118 "rRNA pseudouridine synthesis" evidence=IGI;ISS]
[GO:0031120 "snRNA pseudouridine synthesis" evidence=IGI]
[GO:0031429 "box H/ACA snoRNP complex" evidence=IGI] [GO:0034513
"box H/ACA snoRNA binding" evidence=IGI] InterPro:IPR002415
PRINTS:PR00883 PROSITE:PS01082 PomBase:SPAC1782.10c
InterPro:IPR004038 Pfam:PF01248 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0019843 GO:GO:0031429 GO:GO:0031118
GO:GO:0031120 GO:GO:0034513 eggNOG:COG1358 InterPro:IPR018492
PRINTS:PR00881 HOGENOM:HOG000055227 KO:K11129 OMA:TCCVLVM
EMBL:AJ010068 PIR:T43644 PIR:T50100 RefSeq:NP_594717.1
ProteinModelPortal:Q9P7H0 STRING:Q9P7H0 EnsemblFungi:SPAC1782.10c.1
GeneID:2542369 KEGG:spo:SPAC1782.10c OrthoDB:EOG473T1W
NextBio:20803428 Uniprot:Q9P7H0
Length = 154
Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
Identities = 63/131 (48%), Positives = 98/131 (74%)
Query: 21 SLAPIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPID 80
+L PIAKPLA KKL+K+ +K V++A++ K + RGVKEVVK++R+G KGL ++AG+ISP+D
Sbjct: 24 ALMPIAKPLAPKKLNKKMMKTVKKASKQKHILRGVKEVVKAVRKGEKGLVILAGDISPMD 83
Query: 81 VITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKGELGQEEQDKLKAD 140
VI+H+P+LCE++++PY+Y SKE L A TKRPT CV+++ K ++ + E+ K
Sbjct: 84 VISHIPVLCEDNNVPYLYTVSKELLGEASNTKRPTSCVMIVPGGKKKDMSKVEE--YKES 141
Query: 141 YTLVVEDVKEL 151
Y ++++V L
Sbjct: 142 YEEIIKEVPAL 152
>UNIPROTKB|F1NNP9 [details] [associations]
symbol:NHP2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR002415 PRINTS:PR00883
InterPro:IPR004038 Pfam:PF01248 GO:GO:0005730 GO:GO:0003723
InterPro:IPR018492 PRINTS:PR00881 GeneTree:ENSGT00550000074939
OMA:HLPAVCE EMBL:AADN02028772 IPI:IPI00583712
Ensembl:ENSGALT00000005042 Uniprot:F1NNP9
Length = 158
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 62/130 (47%), Positives = 89/130 (68%)
Query: 7 AERTPHKDEKKKIVSLAPIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGH 66
AE P ++++ L PIA+PLA +KL+++ K +R+AA+HK ++RGVKEV K I +G
Sbjct: 21 AEAAPELSYREQLEHLNPIAQPLASRKLTRKLYKCIRKAAKHKQIRRGVKEVQKFINKGE 80
Query: 67 KGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTK 126
KG+ V+AG+ PIDV H+PI+CE+ ++PY YV SK DL A +KRPTC +L+ KP
Sbjct: 81 KGITVLAGDTLPIDVYCHIPIMCEDRNLPYAYVPSKSDLGAAAGSKRPTCVILL--KPH- 137
Query: 127 GELGQEEQDK 136
E QE D+
Sbjct: 138 -EEYQEAYDE 146
>UNIPROTKB|Q6P8C4 [details] [associations]
symbol:nhp2 "H/ACA ribonucleoprotein complex subunit 2-like
protein" species:8364 "Xenopus (Silurana) tropicalis" [GO:0005732
"small nucleolar ribonucleoprotein complex" evidence=ISS]
[GO:0030515 "snoRNA binding" evidence=ISS] [GO:0031118 "rRNA
pseudouridine synthesis" evidence=ISS] InterPro:IPR002415
InterPro:IPR004037 PRINTS:PR00883 PROSITE:PS01082
InterPro:IPR004038 Pfam:PF01248 GO:GO:0005730 GO:GO:0030515
GO:GO:0031118 GO:GO:0005732 eggNOG:COG1358 HOVERGEN:HBG000328
InterPro:IPR018492 PRINTS:PR00881 HOGENOM:HOG000055227 KO:K11129
OMA:TCCVLVM CTD:55651 GeneTree:ENSGT00550000074939
OrthoDB:EOG4W3SP7 EMBL:BC061305 RefSeq:NP_988989.1 UniGene:Str.1896
ProteinModelPortal:Q6P8C4 STRING:Q6P8C4 Ensembl:ENSXETT00000014709
GeneID:394586 KEGG:xtr:394586 Xenbase:XB-GENE-973261
InParanoid:Q6P8C4 Bgee:Q6P8C4 Uniprot:Q6P8C4
Length = 149
Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 63/135 (46%), Positives = 87/135 (64%)
Query: 6 EAERTPHKDEKKKIVSLAPIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRG 65
E TP K + + L PIAKPLAG+KL+K+ K V++A + K ++RGVKEV K I +G
Sbjct: 11 EVPETPSKSYDELLAYLNPIAKPLAGRKLTKKLYKCVKKAIKQKNIRRGVKEVQKFINKG 70
Query: 66 HKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPT 125
KG+ V+AG+ PI+V H+P++CE+ IPY YV SK DL A +KRPTC +L+ KP
Sbjct: 71 EKGIVVMAGDTLPIEVYCHIPVMCEDRGIPYSYVPSKSDLGAAAGSKRPTCVILI--KPH 128
Query: 126 KGELGQEEQDKLKAD 140
+ QE D+ D
Sbjct: 129 EDY--QEAYDECLED 141
>UNIPROTKB|Q6NTV9 [details] [associations]
symbol:nhp2 "H/ACA ribonucleoprotein complex subunit 2-like
protein" species:8355 "Xenopus laevis" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISS] [GO:0030515 "snoRNA
binding" evidence=ISS] [GO:0031118 "rRNA pseudouridine synthesis"
evidence=ISS] InterPro:IPR002415 InterPro:IPR004037 PRINTS:PR00883
PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248 GO:GO:0005730
GO:GO:0030515 GO:GO:0031118 GO:GO:0005732 HOVERGEN:HBG000328
InterPro:IPR018492 PRINTS:PR00881 KO:K11129 CTD:55651 EMBL:BC068845
RefSeq:NP_001084534.1 UniGene:Xl.44669 ProteinModelPortal:Q6NTV9
GeneID:414481 KEGG:xla:414481 Xenbase:XB-GENE-6252839
Uniprot:Q6NTV9
Length = 149
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 62/135 (45%), Positives = 87/135 (64%)
Query: 6 EAERTPHKDEKKKIVSLAPIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRG 65
E TP K + + L P+AKPLAG+KL+K+ K V++A + K ++RGVKEV K I +G
Sbjct: 11 EVPETPSKSYDELLSYLNPVAKPLAGRKLTKKLYKCVKKAIKQKNIRRGVKEVQKFINKG 70
Query: 66 HKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPT 125
KG+ V+AG+ PI+V H+P++CE+ IPY YV SK DL A +KRPTC +L+ KP
Sbjct: 71 EKGIVVMAGDTLPIEVYCHIPVMCEDRGIPYSYVPSKSDLGAAAGSKRPTCVILI--KPH 128
Query: 126 KGELGQEEQDKLKAD 140
+ QE D+ D
Sbjct: 129 EDY--QEAYDECLED 141
>UNIPROTKB|Q60YI3 [details] [associations]
symbol:CBG18231 "Putative H/ACA ribonucleoprotein complex
subunit 2-like protein" species:6238 "Caenorhabditis briggsae"
[GO:0005732 "small nucleolar ribonucleoprotein complex"
evidence=ISS] [GO:0030515 "snoRNA binding" evidence=ISS]
[GO:0031118 "rRNA pseudouridine synthesis" evidence=ISS]
InterPro:IPR002415 InterPro:IPR004037 PRINTS:PR00883
PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248 GO:GO:0005730
GO:GO:0030515 GO:GO:0031118 GO:GO:0005732 EMBL:HE600936
eggNOG:COG1358 InterPro:IPR018492 PRINTS:PR00881
HOGENOM:HOG000055227 KO:K11129 OMA:HLPAVCE RefSeq:XP_002642246.1
ProteinModelPortal:Q60YI3 STRING:Q60YI3 EnsemblMetazoa:CBG18231
GeneID:8584241 KEGG:cbr:CBG18231 CTD:8584241 WormBase:CBG18231
Uniprot:Q60YI3
Length = 163
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 55/125 (44%), Positives = 87/125 (69%)
Query: 3 SDSEAERTPHKDEKKKIVSLA-PIAKPLAGKKLSKRTLKLVRRAAE-HKCLKRGVKEVVK 60
++ A T KDE + + L PIA+PLA +KL+K+ KL+++AA K L+ G+K+V K
Sbjct: 19 AEDVAALTTEKDEYQALCELVNPIAQPLANRKLAKKVYKLIKKAAAGEKTLREGIKDVQK 78
Query: 61 SIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLV 120
+R+ KG+C++AGN+SPIDV +H+P +CEE +IPY+Y+ S+E L A +RP+ +L+
Sbjct: 79 ELRKNEKGICILAGNVSPIDVYSHIPAICEEKEIPYVYIPSREQLGLAVGHRRPS--ILI 136
Query: 121 LTKPT 125
KP+
Sbjct: 137 FVKPS 141
>WB|WBGene00012964 [details] [associations]
symbol:Y48A6B.3 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] InterPro:IPR002415
InterPro:IPR004037 PRINTS:PR00883 PROSITE:PS01082
InterPro:IPR004038 Pfam:PF01248 GO:GO:0006898 GO:GO:0040010
GO:GO:0005730 GO:GO:0030515 GO:GO:0031118 GO:GO:0005732
EMBL:AL023844 eggNOG:COG1358 InterPro:IPR018492 PRINTS:PR00881
HOGENOM:HOG000055227 KO:K11129 GeneTree:ENSGT00550000074939
OMA:HLPAVCE PIR:T26980 RefSeq:NP_499415.1 ProteinModelPortal:Q9XXD4
SMR:Q9XXD4 STRING:Q9XXD4 PaxDb:Q9XXD4 EnsemblMetazoa:Y48A6B.3.1
EnsemblMetazoa:Y48A6B.3.2 GeneID:176531 KEGG:cel:CELE_Y48A6B.3
UCSC:Y48A6B.3.1 CTD:176531 WormBase:Y48A6B.3 InParanoid:Q9XXD4
NextBio:892968 Uniprot:Q9XXD4
Length = 163
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 60/139 (43%), Positives = 93/139 (66%)
Query: 10 TPHKDEKKKIVSLA-PIAKPLAGKKLSKRTLKLVRRA-AEHKCLKRGVKEVVKSIRRGHK 67
T KDE + + L PIA+PLA +KL+K+ KL+++A A K L+ G+K+V K +RR K
Sbjct: 26 TTEKDEYQALCELVNPIAQPLANRKLAKKVYKLIKKASAGDKTLREGIKDVQKELRRNEK 85
Query: 68 GLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKG 127
G+C++AGN+SPIDV +H+P +CEE +IPY+Y+ S+E L A +RP+ +L+ KP+ G
Sbjct: 86 GICILAGNVSPIDVYSHIPGICEEKEIPYVYIPSREQLGLAVGHRRPS--ILIFVKPS-G 142
Query: 128 ELGQEEQDKLKADYTLVVE 146
+ + + +A L VE
Sbjct: 143 DFKELYDEVAEALRHLTVE 161
>UNIPROTKB|Q9XXD4 [details] [associations]
symbol:Y48A6B.3 "Putative H/ACA ribonucleoprotein complex
subunit 2-like protein" species:6239 "Caenorhabditis elegans"
[GO:0031118 "rRNA pseudouridine synthesis" evidence=ISS]
[GO:0030515 "snoRNA binding" evidence=ISS] [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS]
InterPro:IPR002415 InterPro:IPR004037 PRINTS:PR00883
PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248 GO:GO:0006898
GO:GO:0040010 GO:GO:0005730 GO:GO:0030515 GO:GO:0031118
GO:GO:0005732 EMBL:AL023844 eggNOG:COG1358 InterPro:IPR018492
PRINTS:PR00881 HOGENOM:HOG000055227 KO:K11129
GeneTree:ENSGT00550000074939 OMA:HLPAVCE PIR:T26980
RefSeq:NP_499415.1 ProteinModelPortal:Q9XXD4 SMR:Q9XXD4
STRING:Q9XXD4 PaxDb:Q9XXD4 EnsemblMetazoa:Y48A6B.3.1
EnsemblMetazoa:Y48A6B.3.2 GeneID:176531 KEGG:cel:CELE_Y48A6B.3
UCSC:Y48A6B.3.1 CTD:176531 WormBase:Y48A6B.3 InParanoid:Q9XXD4
NextBio:892968 Uniprot:Q9XXD4
Length = 163
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 60/139 (43%), Positives = 93/139 (66%)
Query: 10 TPHKDEKKKIVSLA-PIAKPLAGKKLSKRTLKLVRRA-AEHKCLKRGVKEVVKSIRRGHK 67
T KDE + + L PIA+PLA +KL+K+ KL+++A A K L+ G+K+V K +RR K
Sbjct: 26 TTEKDEYQALCELVNPIAQPLANRKLAKKVYKLIKKASAGDKTLREGIKDVQKELRRNEK 85
Query: 68 GLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKG 127
G+C++AGN+SPIDV +H+P +CEE +IPY+Y+ S+E L A +RP+ +L+ KP+ G
Sbjct: 86 GICILAGNVSPIDVYSHIPGICEEKEIPYVYIPSREQLGLAVGHRRPS--ILIFVKPS-G 142
Query: 128 ELGQEEQDKLKADYTLVVE 146
+ + + +A L VE
Sbjct: 143 DFKELYDEVAEALRHLTVE 161
>ASPGD|ASPL0000056326 [details] [associations]
symbol:AN0695 species:162425 "Emericella nidulans"
[GO:0034513 "box H/ACA snoRNA binding" evidence=IEA] [GO:0031429
"box H/ACA snoRNP complex" evidence=IEA] [GO:0031120 "snRNA
pseudouridine synthesis" evidence=IEA] [GO:0031118 "rRNA
pseudouridine synthesis" evidence=IEA] InterPro:IPR004037
PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248 EMBL:BN001308
GO:GO:0003676 GO:GO:0042254 GO:GO:0030529 EMBL:AACD01000010
eggNOG:COG1358 HOGENOM:HOG000055227 KO:K11129 OrthoDB:EOG473T1W
RefSeq:XP_658299.1 ProteinModelPortal:Q5BFI5 STRING:Q5BFI5
EnsemblFungi:CADANIAT00001975 GeneID:2876470 KEGG:ani:AN0695.2
OMA:FVTSRAE Uniprot:Q5BFI5
Length = 224
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 64/150 (42%), Positives = 96/150 (64%)
Query: 15 EKKKIVSLAPIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGH-------- 66
E + + +L P AKPL K +K+ LK V++AA +KCLKRGVKEVVK++R+
Sbjct: 68 EARPVGALVPFAKPLLEDKAAKKALKSVKKAAVNKCLKRGVKEVVKALRKSPVPAPNETV 127
Query: 67 ---KGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTK 123
G+ ++A +ISP+DVI+H+P+LCE+ IPY++V S+ +L NA ATKRPT +V+ K
Sbjct: 128 AIPNGVVILAADISPMDVISHIPVLCEDHGIPYVFVTSRAELGNAAATKRPTSVAMVVPK 187
Query: 124 PT-KGELGQEEQDKLKADYTLVVEDVKELA 152
KG+ D D++ V E++ +LA
Sbjct: 188 SAAKGKKKDANDDD--EDFSKVYEELVKLA 215
>MGI|MGI:1098547 [details] [associations]
symbol:Nhp2 "NHP2 ribonucleoprotein" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] InterPro:IPR002415
PRINTS:PR00883 PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248
MGI:MGI:1098547 GO:GO:0005730 GO:GO:0030515 GO:GO:0015030
GO:GO:0031118 GO:GO:0005732 eggNOG:COG1358 HOVERGEN:HBG000328
InterPro:IPR018492 PRINTS:PR00881 HOGENOM:HOG000055227 KO:K11129
CTD:55651 GeneTree:ENSGT00550000074939 OMA:HLPAVCE
OrthoDB:EOG4W3SP7 EMBL:AK007340 EMBL:AK008766 EMBL:AK019134
EMBL:BC024944 IPI:IPI00133550 RefSeq:NP_080907.1 UniGene:Mm.28203
ProteinModelPortal:Q9CRB2 SMR:Q9CRB2 STRING:Q9CRB2
PhosphoSite:Q9CRB2 PaxDb:Q9CRB2 PRIDE:Q9CRB2
Ensembl:ENSMUST00000127405 GeneID:52530 KEGG:mmu:52530
InParanoid:Q9CRB2 NextBio:309089 Bgee:Q9CRB2 Genevestigator:Q9CRB2
GermOnline:ENSMUSG00000001056 Uniprot:Q9CRB2
Length = 153
Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 58/135 (42%), Positives = 94/135 (69%)
Query: 3 SDSEAER-TPHKDEKKKIVSLAPIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKS 61
S+++AE + + K+ +V+L PIA+PLA ++L+++ K +++A + K ++RGVKEV K
Sbjct: 11 SEAQAEGCSEERTYKELLVNLNPIAQPLASRRLTRKLYKCIKKAVKQKQIRRGVKEVQKF 70
Query: 62 IRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVL 121
+ +G KG+ V+AG+ PI+V H+P+LCE+ ++PY+Y+ SK DL A +KRPTC ++V
Sbjct: 71 VNKGEKGIMVLAGDTLPIEVYCHLPVLCEDQNLPYVYIPSKTDLGAATGSKRPTCVIMV- 129
Query: 122 TKPTKGELGQEEQDK 136
KP E QE DK
Sbjct: 130 -KPH--EEYQETYDK 141
>UNIPROTKB|Q8I7X7 [details] [associations]
symbol:Q8I7X7 "H/ACA ribonucleoprotein complex subunit
2-like protein" species:7741 "Branchiostoma belcheri" [GO:0005732
"small nucleolar ribonucleoprotein complex" evidence=ISS]
[GO:0030515 "snoRNA binding" evidence=ISS] [GO:0031118 "rRNA
pseudouridine synthesis" evidence=ISS] InterPro:IPR002415
PRINTS:PR00883 PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248
GO:GO:0005730 GO:GO:0030515 GO:GO:0031118 GO:GO:0005732
HOVERGEN:HBG000328 InterPro:IPR018492 PRINTS:PR00881 EMBL:AY168452
EMBL:AY043319 ProteinModelPortal:Q8I7X7 Uniprot:Q8I7X7
Length = 159
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 54/119 (45%), Positives = 84/119 (70%)
Query: 24 PIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVIT 83
PIA PLA +KL+KR K V++A++ K +++G+++V K I++G +G+ +IAG+ +PI+V
Sbjct: 39 PIASPLAARKLTKRLYKTVKKASKEKNIRKGIRDVQKFIKKGERGIVLIAGDTTPIEVYC 98
Query: 84 HVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKGELGQEEQDKLKADYT 142
H+P++CE++ IPY YV +K+DL A +KRPTCCVL+ KP E Q D+ D T
Sbjct: 99 HLPVVCEDAKIPYCYVPAKQDLGEAAGSKRPTCCVLL--KPN--ESYQSSYDECLTDVT 153
>DICTYBASE|DDB_G0289699 [details] [associations]
symbol:nola2 "ribosomal protein L7Ae" species:44689
"Dictyostelium discoideum" [GO:0005730 "nucleolus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS] [GO:0000154
"rRNA modification" evidence=ISS] [GO:0005840 "ribosome"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR002415 PRINTS:PR00883 dictyBase:DDB_G0289699
InterPro:IPR004038 Pfam:PF01248 GO:GO:0005730
GenomeReviews:CM000154_GR GO:GO:0003723 GO:GO:0005840
EMBL:AAFI02000148 GO:GO:0000154 GO:GO:0005732 eggNOG:COG1358
KO:K11129 OMA:TCCVLVM RefSeq:XP_636065.1 ProteinModelPortal:Q54H53
STRING:Q54H53 PRIDE:Q54H53 EnsemblProtists:DDB0235393
GeneID:8627275 KEGG:ddi:DDB_G0289699 InParanoid:Q54H53
ProtClustDB:CLSZ2728801 Uniprot:Q54H53
Length = 144
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 64/124 (51%), Positives = 84/124 (67%)
Query: 3 SDSEAERTPHKDEKKKIVSLAPIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSI 62
S SE+E E K + L+PIAKPLA KL+ + LKLV++A++ K + RGVKEVVK +
Sbjct: 2 SSSESE-----SEAPKKLFLSPIAKPLADPKLTLKLLKLVKKASKDKKISRGVKEVVKQV 56
Query: 63 R------RGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTC 116
+ R +C+IAG++SPIDVI+H+P+L EES I YIYV SKE L A +TKRPT
Sbjct: 57 KKTKDSSRNKNRICIIAGDVSPIDVISHIPVLLEESGIKYIYVPSKESLGTASSTKRPTS 116
Query: 117 CVLV 120
LV
Sbjct: 117 IALV 120
>UNIPROTKB|Q5E950 [details] [associations]
symbol:NHP2 "H/ACA ribonucleoprotein complex subunit 2"
species:9913 "Bos taurus" [GO:0015030 "Cajal body" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR002415 PRINTS:PR00883 PROSITE:PS01082
InterPro:IPR004038 Pfam:PF01248 GO:GO:0005730 GO:GO:0003723
GO:GO:0030529 GO:GO:0015030 GO:GO:0006364 eggNOG:COG1358
HOVERGEN:HBG000328 InterPro:IPR018492 PRINTS:PR00881
HOGENOM:HOG000055227 KO:K11129 EMBL:BT021070 EMBL:BC103161
IPI:IPI00698988 RefSeq:NP_001015626.1 UniGene:Bt.12966
ProteinModelPortal:Q5E950 STRING:Q5E950 PRIDE:Q5E950
Ensembl:ENSBTAT00000008363 GeneID:520891 KEGG:bta:520891 CTD:55651
GeneTree:ENSGT00550000074939 InParanoid:Q5E950 OMA:HLPAVCE
OrthoDB:EOG4W3SP7 NextBio:20873195 Uniprot:Q5E950
Length = 153
Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 57/129 (44%), Positives = 89/129 (68%)
Query: 8 ERTPHKDEKKKIVSLAPIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHK 67
ERT H+ +V+L PIA+PLA ++L+++ K +++A + K ++RGVKEV K I +G K
Sbjct: 21 ERTYHE----LLVNLNPIAQPLASRRLTRKLYKCIKKAVKQKQIRRGVKEVQKFINKGEK 76
Query: 68 GLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKG 127
G+ V+AG+ PI+V H+P++CE+ ++PY+Y+ SK DL A +KRPTC ++V KP
Sbjct: 77 GIMVLAGDTLPIEVYCHLPVMCEDRNLPYVYIPSKTDLGAAAGSKRPTCVIMV--KPH-- 132
Query: 128 ELGQEEQDK 136
E QE D+
Sbjct: 133 EEYQEAYDE 141
>UNIPROTKB|E2QYZ9 [details] [associations]
symbol:NHP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005730 "nucleolus" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] InterPro:IPR002415 PRINTS:PR00883
InterPro:IPR004038 Pfam:PF01248 GO:GO:0005730 GO:GO:0003723
InterPro:IPR018492 PRINTS:PR00881 KO:K11129 CTD:55651
GeneTree:ENSGT00550000074939 OMA:HLPAVCE EMBL:AAEX03007697
EMBL:AAEX03007698 RefSeq:XP_531874.1 Ensembl:ENSCAFT00000000376
GeneID:474644 KEGG:cfa:474644 NextBio:20850627 Uniprot:E2QYZ9
Length = 153
Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 57/129 (44%), Positives = 89/129 (68%)
Query: 8 ERTPHKDEKKKIVSLAPIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHK 67
ERT H+ +V+L PIA+PLA ++L+++ K +++A + K ++RGVKEV K I +G K
Sbjct: 21 ERTYHE----LLVNLNPIAQPLASRRLTRKLYKCIKKAVKQKQIRRGVKEVQKFINKGEK 76
Query: 68 GLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKG 127
G+ V+AG+ PI+V H+P++CE+ ++PY+Y+ SK DL A +KRPTC ++V KP
Sbjct: 77 GIMVLAGDTLPIEVYCHLPVMCEDRNLPYVYIPSKTDLGAAAGSKRPTCVIMV--KPH-- 132
Query: 128 ELGQEEQDK 136
E QE D+
Sbjct: 133 EEYQEAYDE 141
>ZFIN|ZDB-GENE-030131-533 [details] [associations]
symbol:nhp2 "NHP2 ribonucleoprotein homolog
(yeast)" species:7955 "Danio rerio" [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0031118
"rRNA pseudouridine synthesis" evidence=ISS] [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS] [GO:0030515
"snoRNA binding" evidence=ISS] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR002415 PRINTS:PR00883
PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248
ZFIN:ZDB-GENE-030131-533 GO:GO:0005730 GO:GO:0030515 GO:GO:0031118
GO:GO:0005732 eggNOG:COG1358 HOVERGEN:HBG000328 InterPro:IPR018492
PRINTS:PR00881 HOGENOM:HOG000055227 KO:K11129 CTD:55651
GeneTree:ENSGT00550000074939 OMA:HLPAVCE OrthoDB:EOG4W3SP7
EMBL:BC059569 IPI:IPI00507457 RefSeq:NP_997762.1 UniGene:Dr.76828
ProteinModelPortal:Q6PBV6 STRING:Q6PBV6 PRIDE:Q6PBV6
Ensembl:ENSDART00000101037 GeneID:100003787 KEGG:dre:100003787
InParanoid:Q6PBV6 NextBio:20785984 Bgee:Q6PBV6 Uniprot:Q6PBV6
Length = 150
Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 61/139 (43%), Positives = 87/139 (62%)
Query: 13 KDEKKKIVSLAPIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVI 72
K ++ I ++ PIA PLA +KLSK+ K V++AA+ K ++RGVKEV K I +G G+ V
Sbjct: 19 KSYQELIANINPIANPLASRKLSKKLYKCVKKAAKVKQIRRGVKEVQKFINKGETGIVVF 78
Query: 73 AGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKGELGQE 132
AG+ PIDV H+PI+CE+ +PY YV SK DL ++ +KRPTC +++ KP
Sbjct: 79 AGDTLPIDVYCHLPIMCEDRSLPYAYVPSKVDLGSSAGSKRPTCVIMI--KP-------- 128
Query: 133 EQDKLKADYTLVVEDVKEL 151
D+ K Y VE+V L
Sbjct: 129 -HDEYKEAYDECVEEVTSL 146
>UNIPROTKB|Q9NX24 [details] [associations]
symbol:NHP2 "H/ACA ribonucleoprotein complex subunit 2"
species:9606 "Homo sapiens" [GO:0005730 "nucleolus" evidence=IEA]
[GO:0015030 "Cajal body" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISS] [GO:0030515 "snoRNA
binding" evidence=ISS] [GO:0031118 "rRNA pseudouridine synthesis"
evidence=ISS] InterPro:IPR002415 PRINTS:PR00883 PROSITE:PS01082
InterPro:IPR004038 Pfam:PF01248 GO:GO:0005730 GO:GO:0030515
GO:GO:0015030 GO:GO:0031118 Orphanet:1775 GO:GO:0005732
eggNOG:COG1358 HOVERGEN:HBG000328 InterPro:IPR018492 PRINTS:PR00881
HOGENOM:HOG000055227 KO:K11129 CTD:55651 OMA:HLPAVCE
OrthoDB:EOG4W3SP7 EMBL:AJ293309 EMBL:AF401219 EMBL:AF161404
EMBL:AK000486 EMBL:CR457238 EMBL:AC136632 EMBL:BC000009
EMBL:BC006387 IPI:IPI00041325 RefSeq:NP_001030005.1
RefSeq:NP_060308.1 UniGene:Hs.728908 ProteinModelPortal:Q9NX24
SMR:Q9NX24 IntAct:Q9NX24 STRING:Q9NX24 PhosphoSite:Q9NX24
DMDM:68565945 SWISS-2DPAGE:Q9NX24 PaxDb:Q9NX24 PeptideAtlas:Q9NX24
PRIDE:Q9NX24 Ensembl:ENST00000274606 GeneID:55651 KEGG:hsa:55651
UCSC:uc003mir.2 GeneCards:GC05M177510 HGNC:HGNC:14377 HPA:HPA044171
MIM:606470 MIM:613987 neXtProt:NX_Q9NX24 PharmGKB:PA164723898
InParanoid:Q9NX24 PhylomeDB:Q9NX24 ChiTaRS:NHP2 GenomeRNAi:55651
NextBio:60350 ArrayExpress:Q9NX24 Bgee:Q9NX24 CleanEx:HS_NHP2
Genevestigator:Q9NX24 GermOnline:ENSG00000145912 Uniprot:Q9NX24
Length = 153
Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 54/136 (39%), Positives = 93/136 (68%)
Query: 2 GSDSEAER-TPHKDEKKKIVSLAPIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVK 60
G +++AE + + ++ +V+ PIA+PLA ++L+++ K +++A + K ++RGVKEV K
Sbjct: 10 GPEAQAEACSGERTYQELLVNQNPIAQPLASRRLTRKLYKCIKKAVKQKQIRRGVKEVQK 69
Query: 61 SIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLV 120
+ +G KG+ V+AG+ PI+V H+P++CE+ ++PY+Y+ SK DL A +KRPTC ++V
Sbjct: 70 FVNKGEKGIMVLAGDTLPIEVYCHLPVMCEDRNLPYVYIPSKTDLGAAAGSKRPTCVIMV 129
Query: 121 LTKPTKGELGQEEQDK 136
KP E QE D+
Sbjct: 130 --KPH--EEYQEAYDE 141
>UNIPROTKB|Q5RC65 [details] [associations]
symbol:NHP2 "H/ACA ribonucleoprotein complex subunit 2"
species:9601 "Pongo abelii" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISS] [GO:0030515 "snoRNA
binding" evidence=ISS] [GO:0031118 "rRNA pseudouridine synthesis"
evidence=ISS] InterPro:IPR002415 PRINTS:PR00883 PROSITE:PS01082
InterPro:IPR004038 Pfam:PF01248 GO:GO:0005730 GO:GO:0030515
GO:GO:0015030 GO:GO:0031118 GO:GO:0005732 HOVERGEN:HBG000328
InterPro:IPR018492 PRINTS:PR00881 KO:K11129 CTD:55651
GeneTree:ENSGT00550000074939 OMA:HLPAVCE OrthoDB:EOG4W3SP7
EMBL:CR858415 RefSeq:NP_001125348.1 UniGene:Pab.14448
ProteinModelPortal:Q5RC65 PRIDE:Q5RC65 Ensembl:ENSPPYT00000018740
GeneID:100172250 KEGG:pon:100172250 InParanoid:Q5RC65
Uniprot:Q5RC65
Length = 153
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 50/124 (40%), Positives = 88/124 (70%)
Query: 2 GSDSEAER-TPHKDEKKKIVSLAPIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVK 60
G +++AE + + ++ +V+ PIA+PLA ++L+++ K +++A + K ++RGVKEV K
Sbjct: 10 GPEAQAEACSGERTYQELLVNQNPIAQPLASRRLTRKLYKCIKKAVKQKQIRRGVKEVQK 69
Query: 61 SIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLV 120
+ +G KG+ V+AG+ PI+V H+P++CE+ ++PY+Y+ SK DL A +KRPTC ++V
Sbjct: 70 FVNKGEKGIMVLAGDTLPIEVYCHLPVMCEDRNLPYVYIPSKTDLGAAAGSKRPTCVIMV 129
Query: 121 LTKP 124
KP
Sbjct: 130 --KP 131
>UNIPROTKB|F1S3E3 [details] [associations]
symbol:NHP2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002415 PRINTS:PR00883
InterPro:IPR004038 Pfam:PF01248 GO:GO:0005730 GO:GO:0003723
InterPro:IPR018492 PRINTS:PR00881 GeneTree:ENSGT00550000074939
OMA:HLPAVCE EMBL:CU914278 Ensembl:ENSSSCT00000015328 Uniprot:F1S3E3
Length = 153
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 57/129 (44%), Positives = 87/129 (67%)
Query: 8 ERTPHKDEKKKIVSLAPIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHK 67
ERT H+ +V+L PIA+PLA +KL+++ K + A + K ++RGVKEV K I +G K
Sbjct: 21 ERTYHE----LLVNLNPIAQPLASRKLTRKLYKCIIAAVKQKQIRRGVKEVQKFINKGEK 76
Query: 68 GLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKG 127
G+ V+AG+ P++V H+P++CE+ ++PY+Y+ SK DL A +KRPTC ++V KP
Sbjct: 77 GIMVLAGDTLPVEVYCHLPVMCEDRNLPYVYIPSKTDLGAAAGSKRPTCVIMV--KPH-- 132
Query: 128 ELGQEEQDK 136
E QE D+
Sbjct: 133 EEYQEAYDE 141
>FB|FBgn0029148 [details] [associations]
symbol:NHP2 "NHP2" species:7227 "Drosophila melanogaster"
[GO:0005730 "nucleolus" evidence=NAS] [GO:0031118 "rRNA
pseudouridine synthesis" evidence=ISS] [GO:0030559 "rRNA
pseudouridylation guide activity" evidence=ISS] [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS] [GO:0006364
"rRNA processing" evidence=ISS] [GO:0030515 "snoRNA binding"
evidence=ISS] PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248
EMBL:AE014296 GO:GO:0005730 GO:GO:0030515 GO:GO:0031118
GO:GO:0005732 eggNOG:COG1358 InterPro:IPR018492 PRINTS:PR00881
KO:K11129 CTD:55651 GeneTree:ENSGT00550000074939 OMA:HLPAVCE
EMBL:AF217228 EMBL:BT023752 RefSeq:NP_651965.1 UniGene:Dm.7234
ProteinModelPortal:Q9V3U2 SMR:Q9V3U2 IntAct:Q9V3U2 MINT:MINT-306292
STRING:Q9V3U2 PaxDb:Q9V3U2 PRIDE:Q9V3U2 EnsemblMetazoa:FBtr0075698
EnsemblMetazoa:FBtr0333076 GeneID:44005 KEGG:dme:Dmel_CG5258
UCSC:CG5258-RA FlyBase:FBgn0029148 InParanoid:Q9V3U2
OrthoDB:EOG408KRC PhylomeDB:Q9V3U2 GenomeRNAi:44005 NextBio:836568
Bgee:Q9V3U2 GermOnline:CG5258 Uniprot:Q9V3U2
Length = 160
Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 51/123 (41%), Positives = 81/123 (65%)
Query: 18 KIVSLAPIAKPLAGKKLSKRTLKLVRRAAEHKC-LKRGVKEVVKSIRRGHKGLCVIAGNI 76
K++ + IAKP+AGKKL+K+ KLV++A +HK L+ G+K+V +R+G G+C+ AG++
Sbjct: 33 KLIFVNAIAKPMAGKKLAKKCYKLVKKAMKHKTFLRNGLKDVQTRLRKGETGICIFAGDV 92
Query: 77 SPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKGELGQEEQDK 136
+P+D++ H+P +CEE IPY Y S+ DL A KR T +LV +L E +++
Sbjct: 93 TPVDIMCHLPAVCEEKGIPYTYTPSRADLGAAMGVKRGTVALLVRQNEEYKDLYDEVKEE 152
Query: 137 LKA 139
L A
Sbjct: 153 LSA 155
>UNIPROTKB|Q6XIP0 [details] [associations]
symbol:NHP2 "H/ACA ribonucleoprotein complex subunit 2-like
protein" species:7245 "Drosophila yakuba" [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS] [GO:0030515
"snoRNA binding" evidence=ISS] [GO:0031118 "rRNA pseudouridine
synthesis" evidence=ISS] PROSITE:PS01082 InterPro:IPR004038
Pfam:PF01248 GO:GO:0005730 GO:GO:0030515 GO:GO:0031118
EMBL:CM000159 GO:GO:0005732 eggNOG:COG1358 InterPro:IPR018492
PRINTS:PR00881 KO:K11129 OrthoDB:EOG408KRC EMBL:AY231789
RefSeq:XP_002094819.1 ProteinModelPortal:Q6XIP0 STRING:Q6XIP0
EnsemblMetazoa:FBtr0266518 GeneID:6534135 KEGG:dya:Dyak_GE20000
FlyBase:FBgn0068118 Uniprot:Q6XIP0
Length = 160
Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 51/123 (41%), Positives = 81/123 (65%)
Query: 18 KIVSLAPIAKPLAGKKLSKRTLKLVRRAAEHKC-LKRGVKEVVKSIRRGHKGLCVIAGNI 76
K++ + IAKP+AGKKL+K+ KLV++A +HK L+ G+K+V +R+G G+C+ AG++
Sbjct: 33 KLIFVNAIAKPMAGKKLAKKCYKLVKKAMKHKTFLRNGLKDVQTRLRKGETGICIFAGDV 92
Query: 77 SPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKGELGQEEQDK 136
+P+D++ H+P +CEE IPY Y S+ DL A KR T +LV +L E +++
Sbjct: 93 TPVDIMCHLPAVCEEKGIPYAYTPSRADLGAAMGVKRGTVALLVRQNDEYKDLYDEVKEE 152
Query: 137 LKA 139
L A
Sbjct: 153 LSA 155
>UNIPROTKB|G4N4M3 [details] [associations]
symbol:MGG_05999 "H/ACA ribonucleoprotein complex subunit
2" species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR004037
PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248 EMBL:CM001233
GO:GO:0003676 GO:GO:0042254 GO:GO:0030529 KO:K11129
RefSeq:XP_003711845.1 ProteinModelPortal:G4N4M3
EnsemblFungi:MGG_05999T0 GeneID:2683976 KEGG:mgr:MGG_05999
Uniprot:G4N4M3
Length = 253
Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 55/144 (38%), Positives = 88/144 (61%)
Query: 6 EAERTPHKDEKKKIVSLAPIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRG 65
EA+ K E K +L A PLA K+ K+ LK +++A + L RGVKEV K++R+
Sbjct: 82 EAKAIVAKGELPK-GALVSFALPLADDKIQKKVLKAIKKATKKHALLRGVKEVNKALRKA 140
Query: 66 HK---------GLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTC 116
G+ +IAG+ISP +VI H+P+ CEE ++PY++V+S+ +L A TKRPT
Sbjct: 141 PTKTATTTEVPGVVIIAGDISPAEVIMHLPVYCEERNVPYLFVSSRAELGAAAKTKRPTS 200
Query: 117 CVLVLTKPTKGELGQEEQDKLKAD 140
V++L + K E ++++D ++ D
Sbjct: 201 VVMLLAQGRKREADKKKKDVIEED 224
Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 51/156 (32%), Positives = 84/156 (53%)
Query: 16 KKKIVSLA-PIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHK-----GL 69
K +VS A P+A KK+ K K ++ A + +K K + K+ + G+
Sbjct: 94 KGALVSFALPLADDKIQKKVLKAIKKATKKHALLRGVKEVNKALRKAPTKTATTTEVPGV 153
Query: 70 CVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKGEL 129
+IAG+ISP +VI H+P+ CEE ++PY++V+S+ +L A TKRPT V++L + K E
Sbjct: 154 VIIAGDISPAEVIMHLPVYCEERNVPYLFVSSRAELGAAAKTKRPTSVVMLLAQGRKREA 213
Query: 130 GQEEQDKLKAD---------YTLVVEDV-KELASSL 155
++++D ++ D Y +V KE A L
Sbjct: 214 DKKKKDVIEEDGEEDDYPKAYKELVSTAQKEFAKQL 249
>RGD|1309435 [details] [associations]
symbol:Nhp2 "NHP2 ribonucleoprotein" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR002415 PRINTS:PR00883
InterPro:IPR004038 Pfam:PF01248 RGD:1309435 GO:GO:0005730
GO:GO:0003723 EMBL:CH473948 InterPro:IPR018492 PRINTS:PR00881
KO:K11129 CTD:55651 GeneTree:ENSGT00550000074939 OrthoDB:EOG4W3SP7
EMBL:AC105470 IPI:IPI00952476 RefSeq:NP_001099249.1 UniGene:Rn.4216
Ensembl:ENSRNOT00000064984 GeneID:287273 KEGG:rno:287273
UCSC:RGD:1309435 NextBio:625772 Uniprot:D3ZVC6
Length = 121
Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 43/97 (44%), Positives = 67/97 (69%)
Query: 40 KLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYV 99
K +++A + K ++RGVKEV K + +G KG+ V+AG+ PI+V H+P++CE+ ++PY+Y+
Sbjct: 17 KCIKKAVKQKQIRRGVKEVQKFVNKGEKGIMVLAGDTLPIEVYCHLPVMCEDQNLPYVYI 76
Query: 100 ASKEDLANAGATKRPTCCVLVLTKPTKGELGQEEQDK 136
SK DL A +KRPTC ++V KP + QE DK
Sbjct: 77 PSKTDLGAATGSKRPTCVIMV--KPHEDY--QEAYDK 109
>UNIPROTKB|D6RC52 [details] [associations]
symbol:NHP2 "H/ACA ribonucleoprotein complex subunit 2"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] InterPro:IPR002415
PRINTS:PR00883 InterPro:IPR004038 Pfam:PF01248 GO:GO:0005730
GO:GO:0003723 InterPro:IPR018492 PRINTS:PR00881
HOGENOM:HOG000055227 EMBL:AC136632 HGNC:HGNC:14377 ChiTaRS:NHP2
IPI:IPI00966700 ProteinModelPortal:D6RC52 SMR:D6RC52
Ensembl:ENST00000511078 ArrayExpress:D6RC52 Bgee:D6RC52
Uniprot:D6RC52
Length = 132
Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 39/102 (38%), Positives = 74/102 (72%)
Query: 2 GSDSEAER-TPHKDEKKKIVSLAPIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVK 60
G +++AE + + ++ +V+ PIA+PLA ++L+++ K +++A + K ++RGVKEV K
Sbjct: 10 GPEAQAEACSGERTYQELLVNQNPIAQPLASRRLTRKLYKCIKKAVKQKQIRRGVKEVQK 69
Query: 61 SIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASK 102
+ +G KG+ V+AG+ PI+V H+P++CE+ ++PY+Y+ SK
Sbjct: 70 FVNKGEKGIMVLAGDTLPIEVYCHLPVMCEDRNLPYVYIPSK 111
>UNIPROTKB|D6RCB9 [details] [associations]
symbol:NHP2 "H/ACA ribonucleoprotein complex subunit 2"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] InterPro:IPR002415
PRINTS:PR00883 InterPro:IPR004038 Pfam:PF01248 GO:GO:0005730
GO:GO:0003723 InterPro:IPR018492 PRINTS:PR00881
HOGENOM:HOG000055227 EMBL:AC136632 HGNC:HGNC:14377 ChiTaRS:NHP2
IPI:IPI00968276 ProteinModelPortal:D6RCB9 SMR:D6RCB9
Ensembl:ENST00000514354 ArrayExpress:D6RCB9 Bgee:D6RCB9
Uniprot:D6RCB9
Length = 135
Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 39/102 (38%), Positives = 74/102 (72%)
Query: 2 GSDSEAER-TPHKDEKKKIVSLAPIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVK 60
G +++AE + + ++ +V+ PIA+PLA ++L+++ K +++A + K ++RGVKEV K
Sbjct: 10 GPEAQAEACSGERTYQELLVNQNPIAQPLASRRLTRKLYKCIKKAVKQKQIRRGVKEVQK 69
Query: 61 SIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASK 102
+ +G KG+ V+AG+ PI+V H+P++CE+ ++PY+Y+ SK
Sbjct: 70 FVNKGEKGIMVLAGDTLPIEVYCHLPVMCEDRNLPYVYIPSK 111
>POMBASE|SPAC607.03c [details] [associations]
symbol:snu13 "U3 snoRNP-associated protein Snu13"
species:4896 "Schizosaccharomyces pombe" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0032040 "small-subunit processome"
evidence=ISO] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=ISO] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=ISO] InterPro:IPR002415 InterPro:IPR004037 PRINTS:PR00883
PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248 PomBase:SPAC607.03c
EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR GO:GO:0005681
GO:GO:0003723 GO:GO:0046540 GO:GO:0032040 GO:GO:0030490
GO:GO:0045292 HSSP:P39990 eggNOG:COG1358 HOGENOM:HOG000055226
KO:K12845 OMA:QASNYKQ InterPro:IPR018492 PRINTS:PR00881
EMBL:AF087136 PIR:T50223 RefSeq:NP_593592.1
ProteinModelPortal:O74690 SMR:O74690 STRING:O74690
EnsemblFungi:SPAC607.03c.1 GeneID:2542663 KEGG:spo:SPAC607.03c
OrthoDB:EOG4VQDZT NextBio:20803711 Uniprot:O74690
Length = 125
Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 42/125 (33%), Positives = 71/125 (56%)
Query: 20 VSLAPIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPI 79
+S+ P A PLA L+++ L LV++A+ +K L++G E K++ RG V+A + PI
Sbjct: 1 MSVNPKAFPLADSGLTQQILDLVQQASHYKQLRKGANEATKTLNRGISEFIVMAADTEPI 60
Query: 80 DVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKGELGQEEQDKLKA 139
+++ H+P+LCE+ ++PY++V SK L A RP + T L Q + KL
Sbjct: 61 EILLHLPLLCEDKNVPYVFVPSKAALGRACGVSRPVISASITTNEASDLLPQIQAIKLAI 120
Query: 140 DYTLV 144
+ L+
Sbjct: 121 EKLLI 125
>ZFIN|ZDB-GENE-040426-879 [details] [associations]
symbol:nhp2l1a "NHP2 non-histone chromosome protein
2-like 1a (S. cerevisiae)" species:7955 "Danio rerio" [GO:0003723
"RNA binding" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] InterPro:IPR002415
InterPro:IPR004037 PRINTS:PR00883 PROSITE:PS01082
InterPro:IPR004038 Pfam:PF01248 ZFIN:ZDB-GENE-040426-879
GO:GO:0005730 GO:GO:0042254 GO:GO:0003723 GO:GO:0030529
eggNOG:COG1358 GeneTree:ENSGT00550000074840 HOGENOM:HOG000055226
HOVERGEN:HBG000328 KO:K12845 OrthoDB:EOG4M91T0 InterPro:IPR018492
PRINTS:PR00881 HSSP:P55769 OMA:ANEGIRL EMBL:CT583687 EMBL:BC050495
EMBL:BC066453 IPI:IPI00492489 RefSeq:NP_956606.1 UniGene:Dr.77772
SMR:Q7ZU93 STRING:Q7ZU93 Ensembl:ENSDART00000093031 GeneID:393282
KEGG:dre:393282 CTD:393282 InParanoid:Q7ZU93 NextBio:20814339
Uniprot:Q7ZU93
Length = 128
Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
Identities = 40/100 (40%), Positives = 60/100 (60%)
Query: 24 PIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVIT 83
P A PLA LSK L LV++AA +K L++G E K++ RG V+A + P+++I
Sbjct: 8 PKAYPLADATLSKTILDLVQQAANYKQLRKGANEATKTLNRGISEFIVMAADAEPLEIIL 67
Query: 84 HVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTK 123
H+P+LCE+ ++PY++V SK+ L A RP V K
Sbjct: 68 HLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIATSVTIK 107
>WB|WBGene00010896 [details] [associations]
symbol:M28.5 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] InterPro:IPR002415
InterPro:IPR004037 PRINTS:PR00883 PROSITE:PS01082
InterPro:IPR004038 Pfam:PF01248 GO:GO:0009792 GO:GO:0006898
GO:GO:0040007 GO:GO:0005730 GO:GO:0002119 GO:GO:0008380
GO:GO:0006397 GO:GO:0010171 GO:GO:0000003 GO:GO:0005681
GO:GO:0042254 GO:GO:0003723 eggNOG:COG1358
GeneTree:ENSGT00550000074840 HOGENOM:HOG000055226 KO:K12845
OMA:QASNYKQ InterPro:IPR018492 PRINTS:PR00881 EMBL:Z49911
PIR:T23808 RefSeq:NP_496300.1 ProteinModelPortal:Q21568 SMR:Q21568
STRING:Q21568 PaxDb:Q21568 EnsemblMetazoa:M28.5.1
EnsemblMetazoa:M28.5.2 GeneID:174645 KEGG:cel:CELE_M28.5
UCSC:M28.5.1 CTD:174645 WormBase:M28.5 InParanoid:Q21568
NextBio:884890 Uniprot:Q21568
Length = 128
Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 43/128 (33%), Positives = 72/128 (56%)
Query: 24 PIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVIT 83
P A PLA LS++ + LV++A +K LK+G E K++ RG + V+A + P++++
Sbjct: 8 PKAFPLADTNLSQKLMDLVQQAMNYKQLKKGANEATKTLNRGISEIIVMAADAEPLEILL 67
Query: 84 HVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKGELGQEEQDKLKADYTL 143
H+P+LCE+ ++PY++V SK L A RP + Q E +LK+
Sbjct: 68 HLPLLCEDKNVPYVFVRSKAALGRACGVTRPVIAASIT---------QNEGSQLKSQIQK 118
Query: 144 VVEDVKEL 151
+ EDV++L
Sbjct: 119 IKEDVEKL 126
>ZFIN|ZDB-GENE-030131-9670 [details] [associations]
symbol:nhp2l1b "NHP2 non-histone chromosome
protein 2-like 1b (S. cerevisiae)" species:7955 "Danio rerio"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR002415 InterPro:IPR004037 PRINTS:PR00883
PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248
ZFIN:ZDB-GENE-030131-9670 GO:GO:0005730 GO:GO:0042254 GO:GO:0003723
GO:GO:0030529 eggNOG:COG1358 GeneTree:ENSGT00550000074840
HOGENOM:HOG000055226 HOVERGEN:HBG000328 KO:K12845 OMA:QASNYKQ
OrthoDB:EOG4M91T0 InterPro:IPR018492 PRINTS:PR00881 HSSP:P55769
EMBL:CU104767 EMBL:BC046034 IPI:IPI00497597 RefSeq:NP_955829.1
UniGene:Dr.106039 SMR:Q7ZV23 STRING:Q7ZV23
Ensembl:ENSDART00000029133 GeneID:321114 KEGG:dre:321114 CTD:321114
InParanoid:Q7ZV23 NextBio:20807238 Uniprot:Q7ZV23
Length = 128
Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 39/100 (39%), Positives = 60/100 (60%)
Query: 24 PIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVIT 83
P A PLA LSK L LV++A+ +K L++G E K++ RG V+A + P+++I
Sbjct: 8 PKAYPLADATLSKTILDLVQQASNYKQLRKGANEATKTLNRGISEFIVMAADAEPLEIIL 67
Query: 84 HVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTK 123
H+P+LCE+ ++PY++V SK+ L A RP V K
Sbjct: 68 HLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIATSVTIK 107
>ASPGD|ASPL0000057404 [details] [associations]
symbol:AN1319 species:162425 "Emericella nidulans"
[GO:0032040 "small-subunit processome" evidence=IEA] [GO:0031428
"box C/D snoRNP complex" evidence=IEA] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
InterPro:IPR002415 InterPro:IPR004037 PRINTS:PR00883
PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248 GO:GO:0005730
EMBL:BN001308 GO:GO:0042254 GO:GO:0003723 GO:GO:0030529
EMBL:AACD01000018 eggNOG:COG1358 HOGENOM:HOG000055226 KO:K12845
OMA:QASNYKQ InterPro:IPR018492 PRINTS:PR00881 OrthoDB:EOG4VQDZT
RefSeq:XP_658923.1 ProteinModelPortal:Q5BDR1 SMR:Q5BDR1
STRING:Q5BDR1 EnsemblFungi:CADANIAT00001295 GeneID:2877096
KEGG:ani:AN1319.2 Uniprot:Q5BDR1
Length = 126
Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 38/119 (31%), Positives = 67/119 (56%)
Query: 26 AKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHV 85
A P+A + LS++ L LV+ A ++ LK+G E K++ RG L ++A + +P+ +I H+
Sbjct: 8 AWPIADEALSQQLLDLVQSATHYRQLKKGANETTKTLNRGTSELVILAADTTPLPIILHL 67
Query: 86 PILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKGELGQEEQDKLKADYTLV 144
P+LCE+ ++PY+YV SK L A RP + T + Q K++ + ++
Sbjct: 68 PLLCEDKNVPYVYVPSKLALGRATGVSRPVIAASITTNEASDLMPQIRAIKVQVERLMI 126
>FB|FBgn0015393 [details] [associations]
symbol:hoip "hoi-polloi" species:7227 "Drosophila
melanogaster" [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0030532 "small nuclear ribonucleoprotein complex" evidence=ISS]
[GO:0007399 "nervous system development" evidence=IMP] [GO:0007422
"peripheral nervous system development" evidence=TAS] [GO:0003729
"mRNA binding" evidence=ISS] [GO:0005634 "nucleus" evidence=NAS]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] InterPro:IPR002415 InterPro:IPR004037 PRINTS:PR00883
PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248 GO:GO:0005730
EMBL:AE014134 GO:GO:0007422 GO:GO:0042254 GO:GO:0003723
GO:GO:0071011 GO:GO:0000398 GO:GO:0030532 eggNOG:COG1358
GeneTree:ENSGT00550000074840 KO:K12845 OMA:QASNYKQ
InterPro:IPR018492 PRINTS:PR00881 EMBL:AF208396 RefSeq:NP_524714.1
UniGene:Dm.20299 ProteinModelPortal:Q9U3Z7 SMR:Q9U3Z7
DIP:DIP-21473N IntAct:Q9U3Z7 MINT:MINT-966432 STRING:Q9U3Z7
PaxDb:Q9U3Z7 PRIDE:Q9U3Z7 EnsemblMetazoa:FBtr0079846 GeneID:44173
KEGG:dme:Dmel_CG3949 UCSC:CG3949-RA CTD:44173 FlyBase:FBgn0015393
InParanoid:Q9U3Z7 OrthoDB:EOG46WWRZ PhylomeDB:Q9U3Z7
GenomeRNAi:44173 NextBio:836941 Bgee:Q9U3Z7 GermOnline:CG3949
Uniprot:Q9U3Z7
Length = 127
Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 40/128 (31%), Positives = 73/128 (57%)
Query: 24 PIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVIT 83
P A PLA +L+ + + L+++A + L++G E K++ RG + V+AG+ PI+++
Sbjct: 7 PKAFPLADAQLTAKIMNLLQQALNYNQLRKGANEATKTLNRGLADIVVLAGDAEPIEILL 66
Query: 84 HVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKGELGQEEQDKLKADYTL 143
H+P+LCE+ ++PY++V SK+ L A RP V T E +LK+ T
Sbjct: 67 HLPLLCEDKNVPYVFVRSKQALGRACGVSRPIVACSVTTN---------EGSQLKSQITS 117
Query: 144 VVEDVKEL 151
+ ++++ L
Sbjct: 118 IQQEIERL 125
>UNIPROTKB|Q3B8S0 [details] [associations]
symbol:NHP2L1 "NHP2-like protein 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0030515 "snoRNA
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] InterPro:IPR002415 InterPro:IPR004037
PRINTS:PR00883 PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248
GO:GO:0005730 GO:GO:0008380 GO:GO:0030515 GO:GO:0006397
GO:GO:0005681 GO:GO:0042254 EMBL:BC103317 IPI:IPI00696455
RefSeq:NP_001070472.1 UniGene:Bt.4185 HSSP:P39990
ProteinModelPortal:Q3B8S0 SMR:Q3B8S0 STRING:Q3B8S0 PRIDE:Q3B8S0
Ensembl:ENSBTAT00000008022 GeneID:767931 KEGG:bta:767931 CTD:4809
eggNOG:COG1358 GeneTree:ENSGT00550000074840 HOGENOM:HOG000055226
HOVERGEN:HBG000328 InParanoid:Q3B8S0 KO:K12845 OMA:QASNYKQ
OrthoDB:EOG4M91T0 NextBio:20918288 InterPro:IPR018492
PRINTS:PR00881 Uniprot:Q3B8S0
Length = 128
Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 40/111 (36%), Positives = 65/111 (58%)
Query: 24 PIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVIT 83
P A PLA L+K+ L LV+++ +K L++G E K++ RG V+A + P+++I
Sbjct: 8 PKAYPLADAHLTKKLLDLVQQSCNYKQLRKGANEATKTLNRGISEFIVMAADAEPLEIIL 67
Query: 84 HVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKGELGQEEQ 134
H+P+LCE+ ++PY++V SK+ L A RP V K +L Q+ Q
Sbjct: 68 HLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACSVTIKEGS-QLKQQIQ 117
>UNIPROTKB|E2RRM7 [details] [associations]
symbol:NHP2L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR002415 InterPro:IPR004037 PRINTS:PR00883
PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248 GO:GO:0005730
GO:GO:0042254 GO:GO:0003723 GO:GO:0030529
GeneTree:ENSGT00550000074840 OMA:QASNYKQ InterPro:IPR018492
PRINTS:PR00881 EMBL:AAEX03007292 UniGene:Cfa.9295
ProteinModelPortal:E2RRM7 PRIDE:E2RRM7 Ensembl:ENSCAFT00000001595
NextBio:20850489 Uniprot:E2RRM7
Length = 128
Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 40/111 (36%), Positives = 65/111 (58%)
Query: 24 PIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVIT 83
P A PLA L+K+ L LV+++ +K L++G E K++ RG V+A + P+++I
Sbjct: 8 PKAYPLADAHLTKKLLDLVQQSCNYKQLRKGANEATKTLNRGISEFIVMAADAEPLEIIL 67
Query: 84 HVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKGELGQEEQ 134
H+P+LCE+ ++PY++V SK+ L A RP V K +L Q+ Q
Sbjct: 68 HLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACSVTIKEGS-QLKQQIQ 117
>UNIPROTKB|B1AHD1 [details] [associations]
symbol:NHP2L1 "NHP2-like protein 1" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR002415 InterPro:IPR004037 PRINTS:PR00883
PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248 GO:GO:0005730
GO:GO:0042254 GO:GO:0003723 GO:GO:0030529 EMBL:Z83840
HOGENOM:HOG000055226 HOVERGEN:HBG000328 OMA:QASNYKQ
OrthoDB:EOG4M91T0 InterPro:IPR018492 PRINTS:PR00881
UniGene:Hs.182255 HGNC:HGNC:7819 ChiTaRS:NHP2L1 IPI:IPI00893746
SMR:B1AHD1 STRING:B1AHD1 Ensembl:ENST00000402458 Uniprot:B1AHD1
Length = 132
Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 40/111 (36%), Positives = 65/111 (58%)
Query: 24 PIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVIT 83
P A PLA L+K+ L LV+++ +K L++G E K++ RG V+A + P+++I
Sbjct: 12 PKAYPLADAHLTKKLLDLVQQSCNYKQLRKGANEATKTLNRGISEFIVMAADAEPLEIIL 71
Query: 84 HVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKGELGQEEQ 134
H+P+LCE+ ++PY++V SK+ L A RP V K +L Q+ Q
Sbjct: 72 HLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACSVTIKEGS-QLKQQIQ 121
>UNIPROTKB|P55769 [details] [associations]
symbol:NHP2L1 "NHP2-like protein 1" species:9606 "Homo
sapiens" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0003723 "RNA
binding" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005730 "nucleolus" evidence=TAS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0031428 "box C/D snoRNP complex" evidence=NAS]
[GO:0030515 "snoRNA binding" evidence=IDA] Reactome:REACT_71
InterPro:IPR002415 InterPro:IPR004037 PRINTS:PR00883
PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248 GO:GO:0005654
Reactome:REACT_1675 GO:GO:0005681 GO:GO:0042254 GO:GO:0003723
GO:GO:0000398 EMBL:Z83840 GO:GO:0031428 CTD:4809 eggNOG:COG1358
HOGENOM:HOG000055226 HOVERGEN:HBG000328 KO:K12845 OrthoDB:EOG4M91T0
InterPro:IPR018492 PRINTS:PR00881 EMBL:D50420 EMBL:AF155235
EMBL:AF091076 EMBL:CR456531 EMBL:BC005358 EMBL:BC019282
IPI:IPI00026167 RefSeq:NP_001003796.1 RefSeq:NP_004999.1
UniGene:Hs.182255 PDB:1E7K PDB:2JNB PDB:2OZB PDB:3SIU PDB:3SIV
PDBsum:1E7K PDBsum:2JNB PDBsum:2OZB PDBsum:3SIU PDBsum:3SIV
ProteinModelPortal:P55769 SMR:P55769 IntAct:P55769
MINT:MINT-1382515 STRING:P55769 PhosphoSite:P55769 DMDM:2500345
SWISS-2DPAGE:P55769 PaxDb:P55769 PeptideAtlas:P55769 PRIDE:P55769
DNASU:4809 Ensembl:ENST00000215956 Ensembl:ENST00000355257
Ensembl:ENST00000401959 GeneID:4809 KEGG:hsa:4809 UCSC:uc003bat.3
GeneCards:GC22M042069 HGNC:HGNC:7819 HPA:HPA029199 MIM:601304
MIM:601876 neXtProt:NX_P55769 PharmGKB:PA31621 PhylomeDB:P55769
ChiTaRS:NHP2L1 EvolutionaryTrace:P55769 GenomeRNAi:4809
NextBio:18532 ArrayExpress:P55769 Bgee:P55769 CleanEx:HS_NHP2L1
Genevestigator:P55769 GermOnline:ENSG00000100138 Uniprot:P55769
Length = 128
Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 40/111 (36%), Positives = 65/111 (58%)
Query: 24 PIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVIT 83
P A PLA L+K+ L LV+++ +K L++G E K++ RG V+A + P+++I
Sbjct: 8 PKAYPLADAHLTKKLLDLVQQSCNYKQLRKGANEATKTLNRGISEFIVMAADAEPLEIIL 67
Query: 84 HVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKGELGQEEQ 134
H+P+LCE+ ++PY++V SK+ L A RP V K +L Q+ Q
Sbjct: 68 HLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACSVTIKEGS-QLKQQIQ 117
>UNIPROTKB|F2Z5V3 [details] [associations]
symbol:NHP2L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030515 "snoRNA binding" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR002415 InterPro:IPR004037 PRINTS:PR00883
PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248 GO:GO:0005730
GO:GO:0030515 GO:GO:0042254 GO:GO:0030529 CTD:4809
GeneTree:ENSGT00550000074840 KO:K12845 OMA:QASNYKQ
InterPro:IPR018492 PRINTS:PR00881 EMBL:CU633382
RefSeq:NP_001177155.1 RefSeq:NP_001177156.1 UniGene:Ssc.21604
SMR:F2Z5V3 Ensembl:ENSSSCT00000000064 Ensembl:ENSSSCT00000023171
GeneID:100155420 KEGG:ssc:100155420 Uniprot:F2Z5V3
Length = 128
Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 40/111 (36%), Positives = 65/111 (58%)
Query: 24 PIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVIT 83
P A PLA L+K+ L LV+++ +K L++G E K++ RG V+A + P+++I
Sbjct: 8 PKAYPLADAHLTKKLLDLVQQSCNYKQLRKGANEATKTLNRGISEFIVMAADAEPLEIIL 67
Query: 84 HVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKGELGQEEQ 134
H+P+LCE+ ++PY++V SK+ L A RP V K +L Q+ Q
Sbjct: 68 HLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACSVTIKEGS-QLKQQIQ 117
>RGD|1303103 [details] [associations]
symbol:Nhp2l1 "NHP2 non-histone chromosome protein 2-like 1 (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0007338 "single fertilization"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0030515 "snoRNA binding"
evidence=ISO] InterPro:IPR002415 InterPro:IPR004037 PRINTS:PR00883
PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248 RGD:1303103
GO:GO:0005730 GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0042254 GO:GO:0003723 CTD:4809 eggNOG:COG1358
GeneTree:ENSGT00550000074840 HOGENOM:HOG000055226
HOVERGEN:HBG000328 KO:K12845 OMA:QASNYKQ OrthoDB:EOG4M91T0
InterPro:IPR018492 PRINTS:PR00881 EMBL:BC058493 EMBL:H35080
IPI:IPI00191895 RefSeq:NP_997680.1 RefSeq:XP_003749200.1
RefSeq:XP_003753481.1 UniGene:Rn.1293 ProteinModelPortal:P55770
SMR:P55770 STRING:P55770 PRIDE:P55770 Ensembl:ENSRNOT00000009152
Ensembl:ENSRNOT00000030108 GeneID:100359574 GeneID:300092
KEGG:rno:100359574 KEGG:rno:300092 UCSC:RGD:1303103
InParanoid:P55770 NextBio:646327 Genevestigator:P55770
GermOnline:ENSRNOG00000006762 GermOnline:ENSRNOG00000025154
Uniprot:P55770
Length = 128
Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 40/111 (36%), Positives = 65/111 (58%)
Query: 24 PIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVIT 83
P A PLA L+K+ L LV+++ +K L++G E K++ RG V+A + P+++I
Sbjct: 8 PKAYPLADAHLTKKLLDLVQQSCNYKQLRKGANEATKTLNRGISEFIVMAADAEPLEIIL 67
Query: 84 HVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKGELGQEEQ 134
H+P+LCE+ ++PY++V SK+ L A RP V K +L Q+ Q
Sbjct: 68 HLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACSVTIKEGS-QLKQQIQ 117
>GENEDB_PFALCIPARUM|PF11_0250 [details] [associations]
symbol:PF11_0250 "high mobility group-like
protein NHP2, putative" species:5833 "Plasmodium falciparum"
[GO:0005634 "nucleus" evidence=ISS] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR002415 PRINTS:PR00883
InterPro:IPR004038 Pfam:PF01248 GO:GO:0005634 GO:GO:0005730
GO:GO:0003723 EMBL:AE014186 HOGENOM:HOG000055226 KO:K12845
OMA:QASNYKQ InterPro:IPR018492 PRINTS:PR00881 HSSP:P55769
RefSeq:XP_001347921.1 ProteinModelPortal:Q8IIC4 SMR:Q8IIC4
IntAct:Q8IIC4 MINT:MINT-1604866 PRIDE:Q8IIC4
EnsemblProtists:PF11_0250:mRNA GeneID:810797 KEGG:pfa:PF11_0250
EuPathDB:PlasmoDB:PF3D7_1123900 ProtClustDB:CLSZ2432250
Uniprot:Q8IIC4
Length = 145
Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 36/96 (37%), Positives = 60/96 (62%)
Query: 28 PLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPI 87
PLA +L+ + L +++RA ++ LKRG E VKS+ +G L V+A + P+++I+H+P+
Sbjct: 29 PLASPELTNQILDVIQRATVYRQLKRGANEAVKSLHKGISELVVLAADAKPLEIISHIPL 88
Query: 88 LCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTK 123
+CE+ + PY+YV SK L A R ++TK
Sbjct: 89 VCEDKNTPYVYVRSKMALGRACGISRSVIATSIVTK 124
>UNIPROTKB|Q8IIC4 [details] [associations]
symbol:PF11_0250 "High mobility group-like protein NHP2,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=ISS] InterPro:IPR002415 PRINTS:PR00883 InterPro:IPR004038
Pfam:PF01248 GO:GO:0005634 GO:GO:0005730 GO:GO:0003723
EMBL:AE014186 HOGENOM:HOG000055226 KO:K12845 OMA:QASNYKQ
InterPro:IPR018492 PRINTS:PR00881 HSSP:P55769 RefSeq:XP_001347921.1
ProteinModelPortal:Q8IIC4 SMR:Q8IIC4 IntAct:Q8IIC4
MINT:MINT-1604866 PRIDE:Q8IIC4 EnsemblProtists:PF11_0250:mRNA
GeneID:810797 KEGG:pfa:PF11_0250 EuPathDB:PlasmoDB:PF3D7_1123900
ProtClustDB:CLSZ2432250 Uniprot:Q8IIC4
Length = 145
Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 36/96 (37%), Positives = 60/96 (62%)
Query: 28 PLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPI 87
PLA +L+ + L +++RA ++ LKRG E VKS+ +G L V+A + P+++I+H+P+
Sbjct: 29 PLASPELTNQILDVIQRATVYRQLKRGANEAVKSLHKGISELVVLAADAKPLEIISHIPL 88
Query: 88 LCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTK 123
+CE+ + PY+YV SK L A R ++TK
Sbjct: 89 VCEDKNTPYVYVRSKMALGRACGISRSVIATSIVTK 124
>UNIPROTKB|F1NII6 [details] [associations]
symbol:NHP2L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0030515 "snoRNA binding"
evidence=IEA] InterPro:IPR002415 InterPro:IPR004037 PRINTS:PR00883
PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248 GO:GO:0005730
GO:GO:0030515 GO:GO:0042254 GO:GO:0030529
GeneTree:ENSGT00550000074840 OMA:QASNYKQ InterPro:IPR018492
PRINTS:PR00881 EMBL:AADN02006063 IPI:IPI00571358
Ensembl:ENSGALT00000019461 Uniprot:F1NII6
Length = 144
Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 38/114 (33%), Positives = 65/114 (57%)
Query: 9 RTPHKDEKKKIVSLAPIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKG 68
R H+ + P A PLA +L+K L LV+++ +K L++G E K++ RG
Sbjct: 9 RELHRAAAMSEAEVNPKAYPLADAQLTKTLLDLVQQSCNYKQLRKGANEATKTLNRGIAE 68
Query: 69 LCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPT--CCVLV 120
V+A + P+++I H+P+LCE+ ++PY++V SK+ L A RP C + +
Sbjct: 69 FIVMAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACSITI 122
>UNIPROTKB|J9P8E9 [details] [associations]
symbol:LOC609886 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR002415 InterPro:IPR004037 PRINTS:PR00883
PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248 GO:GO:0005730
GO:GO:0042254 GO:GO:0003723 GO:GO:0030529
GeneTree:ENSGT00550000074840 KO:K12845 InterPro:IPR018492
PRINTS:PR00881 EMBL:AAEX03026883 RefSeq:XP_852208.2
Ensembl:ENSCAFT00000029620 GeneID:609886 KEGG:cfa:609886
OMA:ANEGIRL Uniprot:J9P8E9
Length = 128
Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 39/111 (35%), Positives = 64/111 (57%)
Query: 24 PIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVIT 83
P A LA L+K+ L LV+++ +K L++G E K++ RG V+A + P+++I
Sbjct: 8 PKAYSLADAHLTKKLLDLVQQSCNYKQLRKGANEATKTLNRGISEFIVMAADAKPLEIIL 67
Query: 84 HVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKGELGQEEQ 134
H+P+LCE+ ++PY++V SK+ L A RP V K +L Q+ Q
Sbjct: 68 HLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACSVTIKEGS-QLKQQIQ 117
>RGD|1566078 [details] [associations]
symbol:RGD1566078 "similar to NHP2-like protein 1 (High mobility
group-like nuclear protein 2 homolog 1) (Sperm specific antigen 1)"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] InterPro:IPR002415 InterPro:IPR004037
PRINTS:PR00883 PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248
RGD:1566078 GO:GO:0005730 GO:GO:0042254 GO:GO:0003723 GO:GO:0030529
GeneTree:ENSGT00550000074840 KO:K12845 InterPro:IPR018492
PRINTS:PR00881 RefSeq:XP_001053559.1 RefSeq:XP_343838.3
Ensembl:ENSRNOT00000013187 GeneID:363514 KEGG:rno:363514 CTD:363514
OMA:RISNAVD Uniprot:H7C5X3
Length = 128
Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 39/111 (35%), Positives = 65/111 (58%)
Query: 24 PIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVIT 83
P A PLA L+K+ LV++++ +K L++G E K++ RG V+A + P+++I
Sbjct: 8 PKAYPLADAHLTKKLQDLVQQSSNYKQLRKGANEDTKTLNRGVSEFIVMAADAEPLEIIL 67
Query: 84 HVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKGELGQEEQ 134
H+P+LCE+ ++PY++V SK+ L A RP V K +L Q+ Q
Sbjct: 68 HLPLLCEDKNVPYVFVHSKQALGRARGVSRPVIACSVTIKEGS-QLKQQIQ 117
>GENEDB_PFALCIPARUM|PFD0960c [details] [associations]
symbol:PFD0960c "ribosomal protein L7Ae-related
protein, putative" species:5833 "Plasmodium falciparum" [GO:0005840
"ribosome" evidence=ISS] [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR004038 Pfam:PF01248 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 EMBL:AL844503 InterPro:IPR018492 PRINTS:PR00881
RefSeq:XP_001351506.1 ProteinModelPortal:Q8I1P0 PRIDE:Q8I1P0
EnsemblProtists:PFD0960c:mRNA GeneID:812486 KEGG:pfa:PFD0960c
EuPathDB:PlasmoDB:PF3D7_0419800 HOGENOM:HOG000282742 OMA:PINIICH
ProtClustDB:CLSZ2431927 Uniprot:Q8I1P0
Length = 236
Score = 158 (60.7 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 30/82 (36%), Positives = 52/82 (63%)
Query: 43 RRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASK 102
++ + K + G+ +V+K IR+G+ G+ +IA ++ PI++I H+P CE+ IPY +V +K
Sbjct: 113 QKLLKKKLIVIGLTQVIKCIRKGYSGIVLIAIDVFPINIICHLPSFCEQYKIPYTFVTTK 172
Query: 103 EDLANAGATKRPTCCVLVLTKP 124
LA+ KR C+ +L KP
Sbjct: 173 NKLAHLCKLKRSITCLFIL-KP 193
Score = 42 (19.8 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 13 KDEKKKIVSLAPIAKPLAGKKLSKRTLKLV 42
K+E K ++ I++P+ KK K LK++
Sbjct: 60 KEENKNSY-VSKISEPMLKKKYLKNVLKIL 88
>UNIPROTKB|Q8I1P0 [details] [associations]
symbol:PFD0960c "60S ribosomal protein L7Ae/L30e, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0005840 "ribosome"
evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR004038 Pfam:PF01248 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 EMBL:AL844503 InterPro:IPR018492 PRINTS:PR00881
RefSeq:XP_001351506.1 ProteinModelPortal:Q8I1P0 PRIDE:Q8I1P0
EnsemblProtists:PFD0960c:mRNA GeneID:812486 KEGG:pfa:PFD0960c
EuPathDB:PlasmoDB:PF3D7_0419800 HOGENOM:HOG000282742 OMA:PINIICH
ProtClustDB:CLSZ2431927 Uniprot:Q8I1P0
Length = 236
Score = 158 (60.7 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 30/82 (36%), Positives = 52/82 (63%)
Query: 43 RRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASK 102
++ + K + G+ +V+K IR+G+ G+ +IA ++ PI++I H+P CE+ IPY +V +K
Sbjct: 113 QKLLKKKLIVIGLTQVIKCIRKGYSGIVLIAIDVFPINIICHLPSFCEQYKIPYTFVTTK 172
Query: 103 EDLANAGATKRPTCCVLVLTKP 124
LA+ KR C+ +L KP
Sbjct: 173 NKLAHLCKLKRSITCLFIL-KP 193
Score = 42 (19.8 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 13 KDEKKKIVSLAPIAKPLAGKKLSKRTLKLV 42
K+E K ++ I++P+ KK K LK++
Sbjct: 60 KEENKNSY-VSKISEPMLKKKYLKNVLKIL 88
>DICTYBASE|DDB_G0282243 [details] [associations]
symbol:nhp2l1 "non-histone chromosome protein 2-like
1" species:44689 "Dictyostelium discoideum" [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA;ISS] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR002415 InterPro:IPR004037 PRINTS:PR00883
PROSITE:PS01082 dictyBase:DDB_G0282243 InterPro:IPR004038
Pfam:PF01248 GO:GO:0005730 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GO:GO:0042254 GO:GO:0003723 EMBL:AAFI02000046
eggNOG:COG1358 KO:K12845 OMA:QASNYKQ InterPro:IPR018492
PRINTS:PR00881 RefSeq:XP_640305.1 HSSP:P55769
ProteinModelPortal:Q54ST0 SMR:Q54ST0 STRING:Q54ST0 PRIDE:Q54ST0
EnsemblProtists:DDB0233512 GeneID:8623481 KEGG:ddi:DDB_G0282243
Uniprot:Q54ST0
Length = 129
Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 36/97 (37%), Positives = 58/97 (59%)
Query: 26 AKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHV 85
AKPLA KL+ L L++++ LK+G E K++ R V+A + P++++ H+
Sbjct: 10 AKPLADSKLTLTILDLIQQSNNLGQLKKGANECTKAVSRSTAEFVVLAADAEPLEILLHI 69
Query: 86 PILCEESDIPYIYVASKEDLANAGATKRPT--CCVLV 120
P+LCE+ +IPY++V+SK +L A RP C V V
Sbjct: 70 PLLCEDKNIPYVFVSSKSELGRACDVSRPVVACAVTV 106
>SGD|S000000752 [details] [associations]
symbol:SNU13 "RNA binding protein" species:4932
"Saccharomyces cerevisiae" [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IMP;IPI] [GO:0005730 "nucleolus" evidence=IEA;IDA]
[GO:0031428 "box C/D snoRNP complex" evidence=IDA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA;ISS;IMP;IDA;IPI] [GO:0046540 "U4/U6 x U5 tri-snRNP
complex" evidence=IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000462
"maturation of SSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP] [GO:0032040
"small-subunit processome" evidence=IDA] InterPro:IPR002415
InterPro:IPR004037 PRINTS:PR00883 PROSITE:PS01082 SGD:S000000752
InterPro:IPR004038 Pfam:PF01248 GO:GO:0005681 GO:GO:0003723
EMBL:BK006939 GO:GO:0000398 EMBL:U18530 GO:GO:0046540 GO:GO:0032040
GO:GO:0000462 GO:GO:0031428 eggNOG:COG1358
GeneTree:ENSGT00550000074840 HOGENOM:HOG000055226 KO:K12845
OMA:QASNYKQ InterPro:IPR018492 PRINTS:PR00881 OrthoDB:EOG4VQDZT
EMBL:AY558377 PIR:S50433 RefSeq:NP_010888.1 PDB:1ZWZ PDB:2ALE
PDBsum:1ZWZ PDBsum:2ALE ProteinModelPortal:P39990 SMR:P39990
DIP:DIP-2870N IntAct:P39990 MINT:MINT-627070 STRING:P39990
PaxDb:P39990 PeptideAtlas:P39990 EnsemblFungi:YEL026W GeneID:856687
KEGG:sce:YEL026W CYGD:YEL026w EvolutionaryTrace:P39990
NextBio:982724 Genevestigator:P39990 GermOnline:YEL026W
Uniprot:P39990
Length = 126
Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 34/99 (34%), Positives = 59/99 (59%)
Query: 24 PIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVIT 83
P A PLA L+++ L +V++AA + LK+G E K++ RG ++A + PI+++
Sbjct: 6 PKAFPLADAALTQQILDVVQQAANLRQLKKGANEATKTLNRGISEFIIMAADCEPIEILL 65
Query: 84 HVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLT 122
H+P+LCE+ ++PY++V S+ L A RP + T
Sbjct: 66 HLPLLCEDKNVPYVFVPSRVALGRACGVSRPVIAASITT 104
>TAIR|locus:2127455 [details] [associations]
symbol:AT4G22380 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] InterPro:IPR002415 InterPro:IPR004037
PRINTS:PR00883 PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0005730 GO:GO:0042254
GO:GO:0003723 GO:GO:0005840 eggNOG:COG1358 HOGENOM:HOG000055226
KO:K12845 OMA:QASNYKQ InterPro:IPR018492 PRINTS:PR00881 HSSP:P55769
EMBL:AY086674 EMBL:BT024580 IPI:IPI00546422 RefSeq:NP_193969.1
UniGene:At.70128 ProteinModelPortal:Q8LCC7 SMR:Q8LCC7 STRING:Q8LCC7
PRIDE:Q8LCC7 ProMEX:Q8LCC7 EnsemblPlants:AT4G22380.1 GeneID:828333
KEGG:ath:AT4G22380 TAIR:At4g22380 InParanoid:Q8LCC7
PhylomeDB:Q8LCC7 ProtClustDB:CLSN2685756 Genevestigator:Q8LCC7
Uniprot:Q8LCC7
Length = 128
Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 36/97 (37%), Positives = 58/97 (59%)
Query: 24 PIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVIT 83
P A PLA +LS + LV++A +K LK+G E K++ RG V+A + P++++
Sbjct: 8 PKAYPLADSQLSITIMDLVQQATNYKQLKKGANEATKTLNRGISEFVVMAADAEPLEILL 67
Query: 84 HVPILCEESDIPYIYVASKEDLANAGATKRPT--CCV 118
H+P+L E+ ++PY++V SK+ L A RP C V
Sbjct: 68 HLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSV 104
>CGD|CAL0002459 [details] [associations]
symbol:orf19.5885 species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0031428 "box C/D
snoRNP complex" evidence=IEA] [GO:0046540 "U4/U6 x U5 tri-snRNP
complex" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
InterPro:IPR002415 InterPro:IPR004037 PRINTS:PR00883
PROSITE:PS01082 CGD:CAL0002459 InterPro:IPR004038 Pfam:PF01248
GO:GO:0005730 GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0003723 EMBL:AACQ01000003 EMBL:AACQ01000004 GO:GO:0006364
HSSP:P39990 eggNOG:COG1358 KO:K12845 InterPro:IPR018492
PRINTS:PR00881 RefSeq:XP_722954.1 RefSeq:XP_723101.1
ProteinModelPortal:Q5ANL6 SMR:Q5ANL6 STRING:Q5ANL6 GeneID:3635173
GeneID:3635369 KEGG:cal:CaO19.13306 KEGG:cal:CaO19.5885
Uniprot:Q5ANL6
Length = 126
Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 33/97 (34%), Positives = 57/97 (58%)
Query: 24 PIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVIT 83
P A PLA L+++ L +V+++ + LK+G E K++ RG ++A + PI+++
Sbjct: 6 PKAFPLADSALTQQILDVVQQSQNLRQLKKGANEATKTLNRGISEFIIMAADTEPIEILL 65
Query: 84 HVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLV 120
H+P+LCE+ ++PY++V SK L A RP V
Sbjct: 66 HLPLLCEDKNVPYVFVPSKAALGRACGVSRPVIAASV 102
>TAIR|locus:2149269 [details] [associations]
symbol:AT5G20160 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0005829 "cytosol" evidence=RCA]
[GO:0000478 "endonucleolytic cleavage involved in rRNA processing"
evidence=RCA] [GO:0001510 "RNA methylation" evidence=RCA]
InterPro:IPR002415 InterPro:IPR004037 PRINTS:PR00883
PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248 EMBL:CP002688
GO:GO:0005730 GO:GO:0042254 GO:GO:0003723 GO:GO:0030529 KO:K12845
OMA:ANEGIRL IPI:IPI00533115 RefSeq:NP_850856.1 UniGene:At.23318
ProteinModelPortal:F4K455 SMR:F4K455 EnsemblPlants:AT5G20160.2
GeneID:832138 KEGG:ath:AT5G20160 PhylomeDB:F4K455 Uniprot:F4K455
Length = 160
Score = 119 (46.9 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 21/61 (34%), Positives = 37/61 (60%)
Query: 60 KSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPT--CC 117
K++ RG V+A + P++++ H+P+L E+ ++PY++V SK+ L A RP C
Sbjct: 76 KTLNRGISEFVVMAADAEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACS 135
Query: 118 V 118
V
Sbjct: 136 V 136
Score = 69 (29.3 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 24 PIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVK 60
P A PLA +LS L LV++A +K LK+G E ++
Sbjct: 8 PKAYPLADSQLSITILDLVQQATNYKQLKKGANEGIR 44
>UNIPROTKB|P54066 [details] [associations]
symbol:rpl7ae "50S ribosomal protein L7Ae" species:243232
"Methanocaldococcus jannaschii DSM 2661" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000948 InterPro:IPR004037
InterPro:IPR022481 PRINTS:PR00884 PROSITE:PS01082 HAMAP:MF_00326
InterPro:IPR004038 Pfam:PF01248 GO:GO:0006412 GO:GO:0042254
GO:GO:0003723 GO:GO:0005840 GO:GO:0003735 EMBL:L77117
GenomeReviews:L77117_GR eggNOG:COG1358 InterPro:IPR018492
PRINTS:PR00881 KO:K02936 RefSeq:NP_248198.1 PDB:1RA4 PDB:1SDS
PDB:1XBI PDB:3PAF PDBsum:1RA4 PDBsum:1SDS PDBsum:1XBI PDBsum:3PAF
ProteinModelPortal:P54066 SMR:P54066 IntAct:P54066 GeneID:1452098
KEGG:mja:MJ_1203 OMA:EDVDPPE ProtClustDB:PRK04175
EvolutionaryTrace:P54066 TIGRFAMs:TIGR03677 Uniprot:P54066
Length = 117
Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 36/98 (36%), Positives = 56/98 (57%)
Query: 32 KKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEE 91
+++ K L V +A + +K+G EV K++ RG L +IA ++ P +V+ H+P LCEE
Sbjct: 11 EEIQKELLDAVAKAQK---IKKGANEVTKAVERGIAKLVIIAEDVKPEEVVAHLPYLCEE 67
Query: 92 SDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKGEL 129
IPY YVASK+DL A + V ++ + EL
Sbjct: 68 KGIPYAYVASKQDLGKAAGLEVAASSVAIINEGDAEEL 105
>UNIPROTKB|G4MRY0 [details] [associations]
symbol:MGG_02467 "Ribonucleoprotein-associated protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR002415 InterPro:IPR004037
PRINTS:PR00883 PROSITE:PS01082 InterPro:IPR004038 Pfam:PF01248
GO:GO:0005730 GO:GO:0042254 GO:GO:0003723 GO:GO:0030529
EMBL:CM001231 GO:GO:0043581 KO:K12845 InterPro:IPR018492
PRINTS:PR00881 RefSeq:XP_003709261.1 ProteinModelPortal:G4MRY0
SMR:G4MRY0 EnsemblFungi:MGG_02467T0 GeneID:2681564
KEGG:mgr:MGG_02467 Uniprot:G4MRY0
Length = 126
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 34/106 (32%), Positives = 57/106 (53%)
Query: 26 AKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHV 85
A PLA L++ L LV+ AA ++ LK+G E K++ RG L ++A + P+ ++ H+
Sbjct: 8 AWPLADAALTQEILDLVQSAAHYRQLKKGANEATKTLSRGVSELVILAADCEPLAILLHI 67
Query: 86 PILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKGELGQ 131
P+L E+ ++PY++V SK L A R + + GQ
Sbjct: 68 PLLAEDKNVPYVFVPSKIALGRACGVSRAVIAASITSNEASDLQGQ 113
>UNIPROTKB|J3QSY4 [details] [associations]
symbol:NHP2 "H/ACA ribonucleoprotein complex subunit 2"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] InterPro:IPR002415
PRINTS:PR00883 InterPro:IPR004038 Pfam:PF01248 GO:GO:0005730
GO:GO:0003723 KO:K11129 CTD:55651 EMBL:AC136632
RefSeq:NP_001030005.1 GeneID:55651 KEGG:hsa:55651 HGNC:HGNC:14377
ChiTaRS:NHP2 ProteinModelPortal:J3QSY4 Ensembl:ENST00000314397
Uniprot:J3QSY4
Length = 90
Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 25/71 (35%), Positives = 48/71 (67%)
Query: 2 GSDSEAER-TPHKDEKKKIVSLAPIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVK 60
G +++AE + + ++ +V+ PIA+PLA ++L+++ K +++A + K ++RGVKEV K
Sbjct: 10 GPEAQAEACSGERTYQELLVNQNPIAQPLASRRLTRKLYKCIKKAVKQKQIRRGVKEVQK 69
Query: 61 SIRRGHKGLCV 71
+ +G KG V
Sbjct: 70 FVNKGEKGTWV 80
>UNIPROTKB|J9NTQ4 [details] [associations]
symbol:NHP2L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005730 "nucleolus" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] InterPro:IPR002415 PRINTS:PR00883
InterPro:IPR004038 Pfam:PF01248 GO:GO:0005730 GO:GO:0003723
GeneTree:ENSGT00550000074840 InterPro:IPR018492 PRINTS:PR00881
Ensembl:ENSCAFT00000037180 Uniprot:J9NTQ4
Length = 126
Score = 123 (48.4 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 34/100 (34%), Positives = 54/100 (54%)
Query: 24 PIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVIT 83
P A PLA L K+ L V+++ +K L++G E K++ G L +A + P+++I
Sbjct: 8 PKAYPLADAHLPKKLLD-VQQSRNYKQLRKGAHEATKTLC-GEASLR-LAADAEPLEIIP 64
Query: 84 HVPILC-EESDIPYIYVASKEDLANAGATKRPT--CCVLV 120
H P L EE ++PY++V SK+ L A P C V +
Sbjct: 65 HRPPLPREEKNVPYVFVRSKQALGRACGVSGPVLACPVTI 104
>FB|FBgn0014026 [details] [associations]
symbol:RpL7A "Ribosomal protein L7A" species:7227 "Drosophila
melanogaster" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=ISS;NAS] [GO:0006412 "translation" evidence=ISS;NAS]
[GO:0003735 "structural constituent of ribosome"
evidence=ISS;IDA;NAS] [GO:0005840 "ribosome" evidence=IDA;NAS]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0007052
"mitotic spindle organization" evidence=IMP] [GO:0000022 "mitotic
spindle elongation" evidence=IMP] [GO:0051298 "centrosome
duplication" evidence=IMP] [GO:0051297 "centrosome organization"
evidence=IMP] InterPro:IPR004037 PROSITE:PS01082 InterPro:IPR004038
InterPro:IPR001921 Pfam:PF01248 GO:GO:0051298 EMBL:AE014298
GO:GO:0042254 GO:GO:0005840 GO:GO:0003735 GO:GO:0000022
eggNOG:COG1358 InterPro:IPR018492 PRINTS:PR00881 KO:K02936
PANTHER:PTHR23105:SF1 PRINTS:PR00882 CTD:6130
GeneTree:ENSGT00390000004753 OMA:QRSILYK EMBL:X82782 EMBL:AY089570
PIR:A57416 RefSeq:NP_511063.1 RefSeq:NP_727094.1 UniGene:Dm.7159
ProteinModelPortal:P46223 SMR:P46223 IntAct:P46223
MINT:MINT-1546463 STRING:P46223 PaxDb:P46223
EnsemblMetazoa:FBtr0070915 EnsemblMetazoa:FBtr0070916 GeneID:31588
KEGG:dme:Dmel_CG3314 FlyBase:FBgn0014026 InParanoid:P46223
OrthoDB:EOG41G1M2 PhylomeDB:P46223 ChiTaRS:RPL7A GenomeRNAi:31588
NextBio:774333 GermOnline:CG3314 Uniprot:P46223
Length = 271
Score = 120 (47.3 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 32/102 (31%), Positives = 49/102 (48%)
Query: 23 APIAKPLAGKKLS--KRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPID 80
+P+AK L KK++ K K V + + G V K I + L VIA ++ P++
Sbjct: 111 SPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIEQKKAQLVVIAHDVDPLE 170
Query: 81 VITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLT 122
++ +P LC + +PY V K L +R TC L LT
Sbjct: 171 LVLFLPALCRKMGVPYCIVKGKARLGRL--VRRKTCTTLALT 210
>GENEDB_PFALCIPARUM|PF14_0231 [details] [associations]
symbol:PF14_0231 "ribosomal protein L7a,
putative" species:5833 "Plasmodium falciparum" [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISS]
InterPro:IPR004038 InterPro:IPR001921 Pfam:PF01248 EMBL:AE014187
GO:GO:0022625 InterPro:IPR018492 PRINTS:PR00881
HOGENOM:HOG000216644 KO:K02936 PANTHER:PTHR23105:SF1 PRINTS:PR00882
RefSeq:XP_001348405.2 ProteinModelPortal:Q8ILL2 IntAct:Q8ILL2
MINT:MINT-1566866 PRIDE:Q8ILL2 EnsemblProtists:PF14_0231:mRNA
GeneID:811813 KEGG:pfa:PF14_0231 EuPathDB:PlasmoDB:PF3D7_1424400
ProtClustDB:CLSZ2444896 Uniprot:Q8ILL2
Length = 283
Score = 112 (44.5 bits), Expect = 7.5e-07, Sum P(2) = 7.5e-07
Identities = 29/91 (31%), Positives = 43/91 (47%)
Query: 51 LKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGA 110
LK G+ + K + L VIA ++SPI+++ +P LC ++PY V K L
Sbjct: 149 LKYGINHITKLVENKKANLVVIANDVSPIELVLFLPALCRLKEVPYCIVKDKATLGKLVH 208
Query: 111 TKRPTCCVLVLTKPTKGELGQEEQDKLKADY 141
K T L K +E+Q+KL DY
Sbjct: 209 KKTATAVCLESVK-------KEDQEKL--DY 230
Score = 35 (17.4 bits), Expect = 7.5e-07, Sum P(2) = 7.5e-07
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 13 KDEKKKIVSLAPIAKPLAGKKLSKRTLK 40
K ++KK P PL+ K K+ +K
Sbjct: 5 KKQQKKPSKKTPAPCPLSTKVTVKKEIK 32
>UNIPROTKB|Q8ILL2 [details] [associations]
symbol:PF14_0231 "60S ribosomal protein L7-3, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISS] InterPro:IPR004038
InterPro:IPR001921 Pfam:PF01248 EMBL:AE014187 GO:GO:0022625
InterPro:IPR018492 PRINTS:PR00881 HOGENOM:HOG000216644 KO:K02936
PANTHER:PTHR23105:SF1 PRINTS:PR00882 RefSeq:XP_001348405.2
ProteinModelPortal:Q8ILL2 IntAct:Q8ILL2 MINT:MINT-1566866
PRIDE:Q8ILL2 EnsemblProtists:PF14_0231:mRNA GeneID:811813
KEGG:pfa:PF14_0231 EuPathDB:PlasmoDB:PF3D7_1424400
ProtClustDB:CLSZ2444896 Uniprot:Q8ILL2
Length = 283
Score = 112 (44.5 bits), Expect = 7.5e-07, Sum P(2) = 7.5e-07
Identities = 29/91 (31%), Positives = 43/91 (47%)
Query: 51 LKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGA 110
LK G+ + K + L VIA ++SPI+++ +P LC ++PY V K L
Sbjct: 149 LKYGINHITKLVENKKANLVVIANDVSPIELVLFLPALCRLKEVPYCIVKDKATLGKLVH 208
Query: 111 TKRPTCCVLVLTKPTKGELGQEEQDKLKADY 141
K T L K +E+Q+KL DY
Sbjct: 209 KKTATAVCLESVK-------KEDQEKL--DY 230
Score = 35 (17.4 bits), Expect = 7.5e-07, Sum P(2) = 7.5e-07
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 13 KDEKKKIVSLAPIAKPLAGKKLSKRTLK 40
K ++KK P PL+ K K+ +K
Sbjct: 5 KKQQKKPSKKTPAPCPLSTKVTVKKEIK 32
>DICTYBASE|DDB_G0277629 [details] [associations]
symbol:rpl7a "60S ribosomal protein L7a"
species:44689 "Dictyostelium discoideum" [GO:0005615 "extracellular
space" evidence=IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR004037 PROSITE:PS01082
dictyBase:DDB_G0277629 InterPro:IPR004038 InterPro:IPR001921
Pfam:PF01248 GO:GO:0005615 GenomeReviews:CM000151_GR GO:GO:0042254
GO:GO:0005840 EMBL:AAFI02000020 eggNOG:COG1358 InterPro:IPR018492
PRINTS:PR00881 KO:K02936 PANTHER:PTHR23105:SF1 PRINTS:PR00882
RefSeq:XP_642566.1 HSSP:O29494 ProteinModelPortal:Q54ZD1 SMR:Q54ZD1
STRING:Q54ZD1 PRIDE:Q54ZD1 EnsemblProtists:DDB0231339
GeneID:8621128 KEGG:ddi:DDB_G0277629 OMA:RNASCVA Uniprot:Q54ZD1
Length = 285
Score = 118 (46.6 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 31/109 (28%), Positives = 50/109 (45%)
Query: 11 PHKDEKKKIVSLAPIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLC 70
P + KK L IA+ A + K + +H L+ G+ V K I + L
Sbjct: 119 PEEASVKK-ARLLKIAEARAATPKGQAAPK-AEKPVQH--LRFGIDSVTKLIEKKKAKLV 174
Query: 71 VIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVL 119
VIA ++ P++++ ++P LC D+PY V SK L + +C L
Sbjct: 175 VIAHDVDPVELVLYLPTLCRRMDVPYCIVKSKSRLGELVHMRNASCVAL 223
>UNIPROTKB|F1M289 [details] [associations]
symbol:F1M289 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR004037 PROSITE:PS01082 InterPro:IPR004038
InterPro:IPR001921 Pfam:PF01248 GO:GO:0042254 GO:GO:0030529
InterPro:IPR018492 PRINTS:PR00881 PRINTS:PR00882 IPI:IPI00560876
Ensembl:ENSRNOT00000041959 Uniprot:F1M289
Length = 141
Score = 102 (41.0 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 21/80 (26%), Positives = 37/80 (46%)
Query: 51 LKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGA 110
+ +G+K V + L VIA ++ PI+++ +P LC + +PY + K L
Sbjct: 11 MPKGIKTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRL-- 68
Query: 111 TKRPTCCVLVLTKPTKGELG 130
R TC + T+ + G
Sbjct: 69 VHRKTCTTVAFTQVNSEDKG 88
>UNIPROTKB|Q29375 [details] [associations]
symbol:RPL7A "60S ribosomal protein L7a" species:9823 "Sus
scrofa" [GO:0005840 "ribosome" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] InterPro:IPR004037 PROSITE:PS01082
InterPro:IPR004038 InterPro:IPR001921 Pfam:PF01248 GO:GO:0042254
GO:GO:0005840 InterPro:IPR018492 PRINTS:PR00881
PANTHER:PTHR23105:SF1 PRINTS:PR00882 HOVERGEN:HBG002936 EMBL:F14581
PRIDE:Q29375 Uniprot:Q29375
Length = 132
Score = 100 (40.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 22/80 (27%), Positives = 36/80 (45%)
Query: 51 LKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGA 110
L+ GV V + L VIA ++ PI+++ +P LC + +PY + K L
Sbjct: 47 LRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRL-- 104
Query: 111 TKRPTCCVLVLTKPTKGELG 130
R TC + T+ + G
Sbjct: 105 VHRKTCTTVAFTQVNSEDKG 124
>UNIPROTKB|F2Z4L5 [details] [associations]
symbol:RPL7A "60S ribosomal protein L7a" species:9031
"Gallus gallus" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=IEA] [GO:0042788 "polysomal ribosome"
evidence=IEA] InterPro:IPR004037 PROSITE:PS01082 InterPro:IPR004038
InterPro:IPR001921 Pfam:PF01248 GO:GO:0042254 GO:GO:0042788
GO:GO:0022625 InterPro:IPR018492 PRINTS:PR00881 PRINTS:PR00882
GeneTree:ENSGT00390000004753 IPI:IPI00576428 UniGene:Gga.4080
NextBio:20820506 EMBL:AADN02026482 ProteinModelPortal:F2Z4L5
PRIDE:F2Z4L5 Ensembl:ENSGALT00000039254 ArrayExpress:F2Z4L5
Uniprot:F2Z4L5
Length = 265
Score = 110 (43.8 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 27/100 (27%), Positives = 46/100 (46%)
Query: 51 LKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGA 110
L+ GV V + L VIA ++ PI+++ +P LC + +PY + SK L
Sbjct: 135 LRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKSKARLGRLVH 194
Query: 111 TKRPTCCVLVLTKPT-KGELGQEEQDKLKADYTLVVEDVK 149
K TC P KG L + + +K +Y ++++
Sbjct: 195 RKTCTCVAFTQVNPEDKGALAKLVE-AVKTNYNDRYDEIR 233
>UNIPROTKB|P32429 [details] [associations]
symbol:RPL7A "60S ribosomal protein L7a" species:9031
"Gallus gallus" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] InterPro:IPR004037
PROSITE:PS01082 InterPro:IPR004038 InterPro:IPR001921 Pfam:PF01248
GO:GO:0042254 GO:GO:0005840 EMBL:AB050009 eggNOG:COG1358
InterPro:IPR018492 PRINTS:PR00881 HOGENOM:HOG000216644 KO:K02936
PRINTS:PR00882 CTD:6130 HOVERGEN:HBG002936 OrthoDB:EOG4B8JDV
EMBL:X62640 EMBL:D14522 IPI:IPI00576428 PIR:A46032
RefSeq:NP_001004379.1 UniGene:Gga.4080 ProteinModelPortal:P32429
SMR:P32429 STRING:P32429 PRIDE:P32429 GeneID:417158 KEGG:gga:417158
InParanoid:P32429 NextBio:20820506 ArrayExpress:P32429
Uniprot:P32429
Length = 266
Score = 110 (43.8 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 27/100 (27%), Positives = 46/100 (46%)
Query: 51 LKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGA 110
L+ GV V + L VIA ++ PI+++ +P LC + +PY + SK L
Sbjct: 136 LRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKSKARLGRLVH 195
Query: 111 TKRPTCCVLVLTKPT-KGELGQEEQDKLKADYTLVVEDVK 149
K TC P KG L + + +K +Y ++++
Sbjct: 196 RKTCTCVAFTQVNPEDKGALAKLVE-AVKTNYNDRYDEIR 234
>UNIPROTKB|F1NHA8 [details] [associations]
symbol:RPL7A "60S ribosomal protein L7a" species:9031
"Gallus gallus" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=IEA] [GO:0042788 "polysomal ribosome"
evidence=IEA] InterPro:IPR004037 PROSITE:PS01082 InterPro:IPR004038
InterPro:IPR001921 Pfam:PF01248 GO:GO:0042254 GO:GO:0042788
GO:GO:0022625 InterPro:IPR018492 PRINTS:PR00881 PRINTS:PR00882
GeneTree:ENSGT00390000004753 OMA:QRSILYK EMBL:AADN02026482
IPI:IPI00579541 Ensembl:ENSGALT00000021881 ArrayExpress:F1NHA8
Uniprot:F1NHA8
Length = 270
Score = 110 (43.8 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 27/100 (27%), Positives = 46/100 (46%)
Query: 51 LKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGA 110
L+ GV V + L VIA ++ PI+++ +P LC + +PY + SK L
Sbjct: 140 LRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKSKARLGRLVH 199
Query: 111 TKRPTCCVLVLTKPT-KGELGQEEQDKLKADYTLVVEDVK 149
K TC P KG L + + +K +Y ++++
Sbjct: 200 RKTCTCVAFTQVNPEDKGALAKLVE-AVKTNYNDRYDEIR 238
>WB|WBGene00004481 [details] [associations]
symbol:rps-12 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
InterPro:IPR000530 PRINTS:PR00972 PROSITE:PS01189
InterPro:IPR004038 Pfam:PF01248 GO:GO:0009792 GO:GO:0040007
GO:GO:0002119 GO:GO:0006412 GO:GO:0010171 GO:GO:0040017
GO:GO:0000003 GO:GO:0005840 GO:GO:0003735 eggNOG:COG1358
EMBL:FO080172 HOGENOM:HOG000210688 KO:K02951 PANTHER:PTHR11843
OMA:AENCDEP GeneTree:ENSGT00390000018318 RefSeq:NP_498221.1
ProteinModelPortal:P49196 SMR:P49196 IntAct:P49196 STRING:P49196
World-2DPAGE:0020:P49196 PaxDb:P49196 EnsemblMetazoa:F54E7.2.1
EnsemblMetazoa:F54E7.2.2 EnsemblMetazoa:F54E7.2.3 GeneID:175786
KEGG:cel:CELE_F54E7.2 UCSC:F54E7.2.1 CTD:175786 WormBase:F54E7.2
InParanoid:P49196 NextBio:889662 Uniprot:P49196
Length = 140
Score = 99 (39.9 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 30/86 (34%), Positives = 42/86 (48%)
Query: 20 VSLAPIAKPLAGKKLSKR-TLKLVRRAAEHKC-LKRGVKEVVKSIRRGHKGLCVIAGNIS 77
V +AP A +A + K L+ V RAA H L +G+ E K++ + CV+A N
Sbjct: 8 VQVAPAA--VAQGPMDKEGALRAVLRAAHHADGLAKGLHETCKALDKREAHFCVLAENCD 65
Query: 78 PIDVITHVPILCEESDIPYIYVASKE 103
+ V LC E IP I VA K+
Sbjct: 66 EPQYVKLVETLCAEHQIPLIKVADKK 91
>UNIPROTKB|Q5T8U2 [details] [associations]
symbol:RPL7A "60S ribosomal protein L7a" species:9606 "Homo
sapiens" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] InterPro:IPR004037
PROSITE:PS01082 InterPro:IPR004038 InterPro:IPR001921 Pfam:PF01248
GO:GO:0042254 GO:GO:0005840 EMBL:AL158826 InterPro:IPR018492
PRINTS:PR00881 HOGENOM:HOG000216644 PRINTS:PR00882 ChiTaRS:RPL7A
UniGene:Hs.499839 HGNC:HGNC:10364 IPI:IPI00642454 SMR:Q5T8U2
STRING:Q5T8U2 Ensembl:ENST00000315731 HOVERGEN:HBG058488
Uniprot:Q5T8U2
Length = 151
Score = 100 (40.3 bits), Expect = 0.00017, P = 0.00017
Identities = 22/80 (27%), Positives = 36/80 (45%)
Query: 51 LKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGA 110
L+ GV V + L VIA ++ PI+++ +P LC + +PY + K L
Sbjct: 21 LRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRL-- 78
Query: 111 TKRPTCCVLVLTKPTKGELG 130
R TC + T+ + G
Sbjct: 79 VHRKTCTTVAFTQVNSEDKG 98
>TAIR|locus:2062057 [details] [associations]
symbol:AT2G47610 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0022626 "cytosolic ribosome" evidence=IDA]
[GO:0005774 "vacuolar membrane" evidence=IDA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
[GO:0001510 "RNA methylation" evidence=RCA] InterPro:IPR004037
PROSITE:PS01082 InterPro:IPR004038 InterPro:IPR001921 Pfam:PF01248
GO:GO:0009506 GO:GO:0005774 GO:GO:0009507 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005730 GO:GO:0042254 EMBL:AC002535
GO:GO:0022625 eggNOG:COG1358 InterPro:IPR018492 PRINTS:PR00881
EMBL:AF385719 EMBL:AY052674 EMBL:BT000500 EMBL:AY088386 EMBL:Z26806
IPI:IPI00549123 PIR:T00423 RefSeq:NP_182283.1 UniGene:At.23347
ProteinModelPortal:P49692 SMR:P49692 IntAct:P49692 STRING:P49692
PaxDb:P49692 PRIDE:P49692 EnsemblPlants:AT2G47610.1 GeneID:819374
KEGG:ath:AT2G47610 TAIR:At2g47610 HOGENOM:HOG000216644
InParanoid:P49692 KO:K02936 OMA:ESARRTW PhylomeDB:P49692
ProtClustDB:CLSN2683620 Genevestigator:P49692 GermOnline:AT2G47610
PANTHER:PTHR23105:SF1 PRINTS:PR00882 Uniprot:P49692
Length = 257
Score = 106 (42.4 bits), Expect = 0.00018, P = 0.00018
Identities = 33/139 (23%), Positives = 64/139 (46%)
Query: 17 KKIVSLAPIAKPLAGKKLSKRT-LKLVRRAAEHK---CLKRGVKEVVKSIRRGHKGLCVI 72
K ++ P K ++L K+ + + +E K +K G+ V I + L VI
Sbjct: 89 KVLLKYRPEDKAAKKERLVKKAQAEAEGKPSESKKPIVVKYGLNHVTYLIEQNKAQLVVI 148
Query: 73 AGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTC-CVLVLTKPTKGELGQ 131
A ++ PI+++ +P LC + ++PY V K L K +C C+ + K E +
Sbjct: 149 AHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGAVVHQKTASCLCLTTVKNEDKLEFSK 208
Query: 132 EEQDKLKADYTLVVEDVKE 150
+ +KA++ E+ ++
Sbjct: 209 I-LEAIKANFNDKYEEYRK 226
>POMBASE|SPBC1685.02c [details] [associations]
symbol:rps1202 "40S ribosomal protein S12 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006412 "translation"
evidence=ISO] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISO] InterPro:IPR000530 PRINTS:PR00972 PROSITE:PS01189
PomBase:SPBC1685.02c InterPro:IPR004038 Pfam:PF01248 GO:GO:0005634
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003735 GO:GO:0002181
GO:GO:0022627 eggNOG:COG1358 HOGENOM:HOG000210688 KO:K02951
OMA:HECAKLI PANTHER:PTHR11843 OrthoDB:EOG4TB7MV PIR:T39518
RefSeq:NP_595206.1 ProteinModelPortal:O74322 STRING:O74322
PRIDE:O74322 EnsemblFungi:SPBC1685.02c.1 GeneID:2540015
KEGG:spo:SPBC1685.02c NextBio:20801158 Uniprot:O74322
Length = 148
Score = 99 (39.9 bits), Expect = 0.00020, P = 0.00020
Identities = 31/108 (28%), Positives = 52/108 (48%)
Query: 5 SEAERTPHKDEKKKIVSLAPIAKPLAGKKLS-KRTLK-LVRRAAEHKCLKRGVKEVVKSI 62
+E + P +E + V + + + LS + +LK +++RA H L RG++E K++
Sbjct: 3 TEGDHVPQAEEVIETVEV--VEEETGSSPLSVEDSLKEVLKRALVHDGLARGIREASKAL 60
Query: 63 RRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLAN-AG 109
R LCV+ + + V LC ES P + VA + L AG
Sbjct: 61 DRRQAHLCVLCESCDQEAYVKLVEALCAESQTPLVKVADPKILGEWAG 108
>RGD|1595463 [details] [associations]
symbol:LOC680161 "similar to 60S ribosomal protein L7a"
species:10116 "Rattus norvegicus" [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] InterPro:IPR004037 PROSITE:PS01082 InterPro:IPR004038
InterPro:IPR001921 Pfam:PF01248 RGD:1595463 GO:GO:0042254
GO:GO:0030529 InterPro:IPR018492 PRINTS:PR00881 KO:K02936
PRINTS:PR00882 GeneTree:ENSGT00390000004753 OrthoDB:EOG4B8JDV
IPI:IPI00565067 RefSeq:XP_001056899.1 RefSeq:XP_002726525.1
Ensembl:ENSRNOT00000047694 GeneID:680161 KEGG:rno:680161
UCSC:RGD:1595463 NextBio:718089 Uniprot:D4A6B9
Length = 266
Score = 105 (42.0 bits), Expect = 0.00026, P = 0.00026
Identities = 36/122 (29%), Positives = 51/122 (41%)
Query: 9 RTPHKDEKKKIVSLAPIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKG 68
R K EKK+ + LAP K AGK V RA GV V +
Sbjct: 103 RPETKQEKKQRL-LAPADKKAAGKGDVPTKRPPVLRA--------GVNTVTTLVENKKAQ 153
Query: 69 LCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKGE 128
L VIA ++ PI+++ +P LC + +PY + K L R TC + T+ +
Sbjct: 154 LVVIAHDVDPIELVVFLPALCGKMGVPYCIIKGKARLGRL--VHRKTCTTVAFTQVNSED 211
Query: 129 LG 130
G
Sbjct: 212 KG 213
>POMBASE|SPBC29A3.04 [details] [associations]
symbol:rpl8 "60S ribosomal protein L7a/L8 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0006412 "translation" evidence=ISO]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=ISO]
[GO:0042254 "ribosome biogenesis" evidence=IEA] InterPro:IPR004037
PROSITE:PS01082 InterPro:IPR004038 InterPro:IPR001921 Pfam:PF01248
PomBase:SPBC29A3.04 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0042254 GO:GO:0003735 GO:GO:0002181 GO:GO:0022625
eggNOG:COG1358 InterPro:IPR018492 PRINTS:PR00881
HOGENOM:HOG000216644 KO:K02936 PANTHER:PTHR23105:SF1 PRINTS:PR00882
OMA:QRSILYK OrthoDB:EOG4KWP2Z EMBL:AJ001133 EMBL:AB005750
PIR:T40075 RefSeq:NP_595832.1 ProteinModelPortal:O13672 SMR:O13672
IntAct:O13672 MINT:MINT-4782010 STRING:O13672 PRIDE:O13672
EnsemblFungi:SPBC29A3.04.1 GeneID:2540517 KEGG:spo:SPBC29A3.04
NextBio:20801644 Uniprot:O13672
Length = 259
Score = 99 (39.9 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 26/87 (29%), Positives = 46/87 (52%)
Query: 51 LKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGA 110
+K G+ VV I L +IA ++ PI+++ +P LC++ +PY V +K L
Sbjct: 132 VKYGLNHVVALIEAKKAKLVLIASDVDPIELVVFLPALCKKMGVPYAIVKNKARLGTVIH 191
Query: 111 TKRPTCCVLVLTKPTKGELGQEEQDKL 137
K T VL +T E+ +E++++L
Sbjct: 192 QK--TAAVLAVT-----EVREEDKNEL 211
Score = 36 (17.7 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 16 KKKIVSLAPIAKPLAGK 32
K K V+ +P A+P A K
Sbjct: 4 KSKKVAPSPFAQPKAAK 20
>TAIR|locus:2081715 [details] [associations]
symbol:AT3G62870 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0022626 "cytosolic ribosome" evidence=IDA] [GO:0005774
"vacuolar membrane" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=RCA] [GO:0001510 "RNA methylation"
evidence=RCA] InterPro:IPR004037 PROSITE:PS01082 InterPro:IPR004038
InterPro:IPR001921 Pfam:PF01248 GO:GO:0005774 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0042254 EMBL:AL162651 GO:GO:0022625
eggNOG:COG1358 InterPro:IPR018492 PRINTS:PR00881
HOGENOM:HOG000216644 KO:K02936 ProtClustDB:CLSN2683620
PANTHER:PTHR23105:SF1 PRINTS:PR00882 EMBL:AY052264 EMBL:AY060519
EMBL:AY062758 EMBL:AY114667 EMBL:AY086353 IPI:IPI00535564
PIR:T48076 RefSeq:NP_191846.1 UniGene:At.22352 UniGene:At.67716
ProteinModelPortal:Q9LZH9 SMR:Q9LZH9 STRING:Q9LZH9 PaxDb:Q9LZH9
PRIDE:Q9LZH9 EnsemblPlants:AT3G62870.1 GeneID:825462
KEGG:ath:AT3G62870 TAIR:At3g62870 InParanoid:Q9LZH9 OMA:REDEAQQ
PhylomeDB:Q9LZH9 Genevestigator:Q9LZH9 GermOnline:AT3G62870
Uniprot:Q9LZH9
Length = 256
Score = 104 (41.7 bits), Expect = 0.00036, P = 0.00036
Identities = 37/126 (29%), Positives = 59/126 (46%)
Query: 30 AGKK---LSKRTLKLVRRAAEHK---CLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVIT 83
A KK L+K + + AE K +K G+ V I + L VIA ++ PI+++
Sbjct: 99 AAKKERLLNKAQAEAEGKPAESKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVV 158
Query: 84 HVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKGELGQEEQDKLKADYTL 143
+P LC + ++PY V K L + T L LT K E DKL +++
Sbjct: 159 WLPALCRKMEVPYCIVKGKSRLG--AVVHQKTAAALCLTT-VKNE------DKL--EFSK 207
Query: 144 VVEDVK 149
++E +K
Sbjct: 208 ILEAIK 213
>RGD|1559149 [details] [associations]
symbol:RGD1559149 "sim to 60S ribosomal protein L7a"
species:10116 "Rattus norvegicus" [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] InterPro:IPR004037 PROSITE:PS01082 InterPro:IPR004038
InterPro:IPR001921 Pfam:PF01248 RGD:1559149 GO:GO:0042254
GO:GO:0030529 InterPro:IPR018492 PRINTS:PR00881 PRINTS:PR00882
GeneTree:ENSGT00390000004753 OrthoDB:EOG4B8JDV IPI:IPI00366343
Ensembl:ENSRNOT00000041927 UCSC:RGD:1559149 NextBio:656798
Uniprot:D3ZWM2
Length = 262
Score = 104 (41.7 bits), Expect = 0.00038, P = 0.00038
Identities = 36/135 (26%), Positives = 60/135 (44%)
Query: 9 RTPHKDEKKKIVSLAPIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKG 68
R K EKK+ + LA K AGK R + R L+ GV V +
Sbjct: 99 RPETKQEKKQRL-LARAEKKAAGK----RDVPPKRVPV----LQAGVNTVTTLVENKKAQ 149
Query: 69 LCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKGE 128
L +IA ++ PI+++ +P LC + +PY + K+ L R TC + T+ +
Sbjct: 150 LVMIAHDVDPIELVVFLPALCRKMGVPYCIIKGKDRLGRL--VHRKTCTTVAFTQVNSED 207
Query: 129 LGQEEQ--DKLKADY 141
G + + ++A+Y
Sbjct: 208 KGALAKLVEAIRANY 222
>WB|WBGene00004419 [details] [associations]
symbol:rpl-7A species:6239 "Caenorhabditis elegans"
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0005516 "calmodulin binding"
evidence=IPI] InterPro:IPR004037 PROSITE:PS01082 InterPro:IPR004038
InterPro:IPR001921 Pfam:PF01248 GO:GO:0009792 GO:GO:0042254
GO:GO:0005840 GO:GO:0040035 eggNOG:COG1358 InterPro:IPR018492
PRINTS:PR00881 HOGENOM:HOG000216644 KO:K02936 PANTHER:PTHR23105:SF1
PRINTS:PR00882 GeneTree:ENSGT00390000004753 OMA:QRSILYK
EMBL:FO081479 RefSeq:NP_741371.2 RefSeq:NP_741372.2
ProteinModelPortal:Q966C6 SMR:Q966C6 DIP:DIP-25472N
MINT:MINT-1106781 STRING:Q966C6 PaxDb:Q966C6 PRIDE:Q966C6
EnsemblMetazoa:Y24D9A.4a GeneID:177203 KEGG:cel:CELE_Y24D9A.4
UCSC:Y24D9A.4a CTD:177203 WormBase:Y24D9A.4a WormBase:Y24D9A.4c
InParanoid:Q966C6 NextBio:895770 Uniprot:Q966C6
Length = 265
Score = 104 (41.7 bits), Expect = 0.00039, P = 0.00039
Identities = 18/74 (24%), Positives = 36/74 (48%)
Query: 51 LKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGA 110
++ GV + + + L +IA +++P++++ H+P LC + ++PY + K L
Sbjct: 137 VRHGVNTITRLVETRRAQLVLIAHDVNPLEIVLHLPALCRKYNVPYAIIKGKASLGTVVR 196
Query: 111 TKRPTCCVLVLTKP 124
K LV P
Sbjct: 197 RKTTAAVALVDVNP 210
>RGD|1562953 [details] [associations]
symbol:RGD1562953 "similar to Rpl7a protein" species:10116
"Rattus norvegicus" [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR004037 PROSITE:PS01082 InterPro:IPR004038
InterPro:IPR001921 Pfam:PF01248 RGD:1562953 GO:GO:0042254
GO:GO:0030529 InterPro:IPR018492 PRINTS:PR00881 KO:K02936
PRINTS:PR00882 GeneTree:ENSGT00390000004753 OrthoDB:EOG4B8JDV
IPI:IPI00568945 RefSeq:XP_001066216.1 RefSeq:XP_574700.1
PRIDE:D3ZPL5 Ensembl:ENSRNOT00000041410 GeneID:499382
KEGG:rno:499382 CTD:499382 OMA:CCEAGIS NextBio:702734
Uniprot:D3ZPL5
Length = 266
Score = 104 (41.7 bits), Expect = 0.00040, P = 0.00040
Identities = 22/80 (27%), Positives = 38/80 (47%)
Query: 51 LKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGA 110
L+ GV V + L VIA ++ PI+++ +P LC + +PY+ + K L +
Sbjct: 136 LRAGVNTVTTLVENKKAQLVVIARDVDPIELVVFLPALCRKMGVPYLIIKGKTRLGHL-- 193
Query: 111 TKRPTCCVLVLTKPTKGELG 130
R TC + T+ + G
Sbjct: 194 VHRKTCTTVAFTQVNSEDKG 213
>UNIPROTKB|Q2MHD3 [details] [associations]
symbol:RPL7A "60S ribosomal protein L7a" species:9031
"Gallus gallus" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=IEA] [GO:0042788 "polysomal ribosome"
evidence=IEA] InterPro:IPR004037 PROSITE:PS01082 InterPro:IPR004038
InterPro:IPR001921 Pfam:PF01248 GO:GO:0042254 GO:GO:0042788
GO:GO:0022625 InterPro:IPR018492 PRINTS:PR00881
HOGENOM:HOG000216644 PRINTS:PR00882 GeneTree:ENSGT00390000004753
UniGene:Gga.4080 HOVERGEN:HBG058488 EMBL:AADN02026482 EMBL:AB221488
IPI:IPI00821871 STRING:Q2MHD3 Ensembl:ENSGALT00000005066
InParanoid:Q2MHD3 Uniprot:Q2MHD3
Length = 108
Score = 85 (35.0 bits), Expect = 0.00087, P = 0.00087
Identities = 19/76 (25%), Positives = 36/76 (47%)
Query: 75 NISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPT-KGELGQEE 133
++ PI+++ +P LC + +PY + SK L K TC P KG L +
Sbjct: 2 DVDPIELVVFLPALCRKMGVPYCIIKSKARLGRLVHRKTCTCVAFTQVNPEDKGALAKLV 61
Query: 134 QDKLKADYTLVVEDVK 149
+ +K +Y ++++
Sbjct: 62 E-AVKTNYNDRYDEIR 76
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.133 0.374 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 156 156 0.00073 106 3 11 23 0.39 32
30 0.42 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 74
No. of states in DFA: 518 (55 KB)
Total size of DFA: 121 KB (2080 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.58u 0.09s 14.67t Elapsed: 00:00:01
Total cpu time: 14.58u 0.09s 14.67t Elapsed: 00:00:01
Start: Thu May 9 16:13:49 2013 End: Thu May 9 16:13:50 2013