BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031617
(156 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LEY9|NHP2_ARATH H/ACA ribonucleoprotein complex subunit 2-like protein
OS=Arabidopsis thaliana GN=At5g08180 PE=1 SV=1
Length = 156
Score = 233 bits (594), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 113/156 (72%), Positives = 133/156 (85%)
Query: 1 MGSDSEAERTPHKDEKKKIVSLAPIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVK 60
MGSD+EAE++ K++KK ++LAPIAKPLAGKKL KRT KL+++AA KCLKRGVKEVVK
Sbjct: 1 MGSDTEAEKSIQKEKKKYAITLAPIAKPLAGKKLQKRTFKLIQKAAGKKCLKRGVKEVVK 60
Query: 61 SIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLV 120
SIRRG KGLCVIAGNISPIDVITH+PILCEE+ +PY+YV SKEDLA AGATKRPTCCVLV
Sbjct: 61 SIRRGQKGLCVIAGNISPIDVITHLPILCEEAGVPYVYVPSKEDLAQAGATKRPTCCVLV 120
Query: 121 LTKPTKGELGQEEQDKLKADYTLVVEDVKELASSLF 156
+ KP KG+L EE KLK DY V +D+KELA+S+
Sbjct: 121 MLKPAKGDLTAEELAKLKTDYEQVSDDIKELATSVI 156
>sp|P32495|NHP2_YEAST H/ACA ribonucleoprotein complex subunit 2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=NHP2 PE=1
SV=2
Length = 156
Score = 145 bits (366), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 67/134 (50%), Positives = 102/134 (76%)
Query: 18 KIVSLAPIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNIS 77
++ ++ P AKPLA KKL+K+ LK V++A++ K +KRGVKEVVK++R+G KGL VIAG+IS
Sbjct: 23 RMPAVLPFAKPLASKKLNKKVLKTVKKASKAKNVKRGVKEVVKALRKGEKGLVVIAGDIS 82
Query: 78 PIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKGELGQEEQDKL 137
P DVI+H+P+LCE+ +PYI++ SK+DL AGATKRPT V ++ K + G+ ++++
Sbjct: 83 PADVISHIPVLCEDHSVPYIFIPSKQDLGAAGATKRPTSVVFIVPGSNKKKDGKNKEEEY 142
Query: 138 KADYTLVVEDVKEL 151
K + VV++V+ L
Sbjct: 143 KESFNEVVKEVQAL 156
>sp|Q9P7H0|NHP2_SCHPO H/ACA ribonucleoprotein complex subunit 2 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=nhp2 PE=1 SV=1
Length = 154
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/131 (48%), Positives = 98/131 (74%), Gaps = 2/131 (1%)
Query: 21 SLAPIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPID 80
+L PIAKPLA KKL+K+ +K V++A++ K + RGVKEVVK++R+G KGL ++AG+ISP+D
Sbjct: 24 ALMPIAKPLAPKKLNKKMMKTVKKASKQKHILRGVKEVVKAVRKGEKGLVILAGDISPMD 83
Query: 81 VITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKGELGQEEQDKLKAD 140
VI+H+P+LCE++++PY+Y SKE L A TKRPT CV+++ K ++ + E+ K
Sbjct: 84 VISHIPVLCEDNNVPYLYTVSKELLGEASNTKRPTSCVMIVPGGKKKDMSKVEE--YKES 141
Query: 141 YTLVVEDVKEL 151
Y ++++V L
Sbjct: 142 YEEIIKEVPAL 152
>sp|Q6P8C4|NHP2_XENTR H/ACA ribonucleoprotein complex subunit 2-like protein OS=Xenopus
tropicalis GN=nhp2 PE=2 SV=1
Length = 149
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 57/115 (49%), Positives = 79/115 (68%)
Query: 6 EAERTPHKDEKKKIVSLAPIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRG 65
E TP K + + L PIAKPLAG+KL+K+ K V++A + K ++RGVKEV K I +G
Sbjct: 11 EVPETPSKSYDELLAYLNPIAKPLAGRKLTKKLYKCVKKAIKQKNIRRGVKEVQKFINKG 70
Query: 66 HKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLV 120
KG+ V+AG+ PI+V H+P++CE+ IPY YV SK DL A +KRPTC +L+
Sbjct: 71 EKGIVVMAGDTLPIEVYCHIPVMCEDRGIPYSYVPSKSDLGAAAGSKRPTCVILI 125
>sp|Q6NTV9|NHP2_XENLA H/ACA ribonucleoprotein complex subunit 2-like protein OS=Xenopus
laevis GN=nhp2 PE=2 SV=1
Length = 149
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 79/115 (68%)
Query: 6 EAERTPHKDEKKKIVSLAPIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRG 65
E TP K + + L P+AKPLAG+KL+K+ K V++A + K ++RGVKEV K I +G
Sbjct: 11 EVPETPSKSYDELLSYLNPVAKPLAGRKLTKKLYKCVKKAIKQKNIRRGVKEVQKFINKG 70
Query: 66 HKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLV 120
KG+ V+AG+ PI+V H+P++CE+ IPY YV SK DL A +KRPTC +L+
Sbjct: 71 EKGIVVMAGDTLPIEVYCHIPVMCEDRGIPYSYVPSKSDLGAAAGSKRPTCVILI 125
>sp|Q60YI3|NHP2_CAEBR Putative H/ACA ribonucleoprotein complex subunit 2-like protein
OS=Caenorhabditis briggsae GN=CBG18231 PE=3 SV=1
Length = 163
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 85/121 (70%), Gaps = 4/121 (3%)
Query: 7 AERTPHKDEKKKIVSLA-PIAKPLAGKKLSKRTLKLVRRAAE-HKCLKRGVKEVVKSIRR 64
A T KDE + + L PIA+PLA +KL+K+ KL+++AA K L+ G+K+V K +R+
Sbjct: 23 AALTTEKDEYQALCELVNPIAQPLANRKLAKKVYKLIKKAAAGEKTLREGIKDVQKELRK 82
Query: 65 GHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKP 124
KG+C++AGN+SPIDV +H+P +CEE +IPY+Y+ S+E L A +RP+ +L+ KP
Sbjct: 83 NEKGICILAGNVSPIDVYSHIPAICEEKEIPYVYIPSREQLGLAVGHRRPS--ILIFVKP 140
Query: 125 T 125
+
Sbjct: 141 S 141
>sp|Q9XXD4|NHP2_CAEEL Putative H/ACA ribonucleoprotein complex subunit 2-like protein
OS=Caenorhabditis elegans GN=Y48A6B.3 PE=3 SV=1
Length = 163
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 84/118 (71%), Gaps = 4/118 (3%)
Query: 10 TPHKDEKKKIVSLA-PIAKPLAGKKLSKRTLKLVRRA-AEHKCLKRGVKEVVKSIRRGHK 67
T KDE + + L PIA+PLA +KL+K+ KL+++A A K L+ G+K+V K +RR K
Sbjct: 26 TTEKDEYQALCELVNPIAQPLANRKLAKKVYKLIKKASAGDKTLREGIKDVQKELRRNEK 85
Query: 68 GLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPT 125
G+C++AGN+SPIDV +H+P +CEE +IPY+Y+ S+E L A +RP+ +L+ KP+
Sbjct: 86 GICILAGNVSPIDVYSHIPGICEEKEIPYVYIPSREQLGLAVGHRRPS--ILIFVKPS 141
>sp|Q9CRB2|NHP2_MOUSE H/ACA ribonucleoprotein complex subunit 2 OS=Mus musculus GN=Nhp2
PE=2 SV=1
Length = 153
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 102/154 (66%), Gaps = 12/154 (7%)
Query: 3 SDSEAER-TPHKDEKKKIVSLAPIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKS 61
S+++AE + + K+ +V+L PIA+PLA ++L+++ K +++A + K ++RGVKEV K
Sbjct: 11 SEAQAEGCSEERTYKELLVNLNPIAQPLASRRLTRKLYKCIKKAVKQKQIRRGVKEVQKF 70
Query: 62 IRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVL 121
+ +G KG+ V+AG+ PI+V H+P+LCE+ ++PY+Y+ SK DL A +KRPTC ++V
Sbjct: 71 VNKGEKGIMVLAGDTLPIEVYCHLPVLCEDQNLPYVYIPSKTDLGAATGSKRPTCVIMV- 129
Query: 122 TKPTKGELGQEEQDKLKADYTLVVEDVKELASSL 155
KP E QE DK +E+V+ L + L
Sbjct: 130 -KP--HEEYQETYDK-------CLEEVQALPTPL 153
>sp|Q5E950|NHP2_BOVIN H/ACA ribonucleoprotein complex subunit 2 OS=Bos taurus GN=NHP2
PE=2 SV=1
Length = 153
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 82/114 (71%), Gaps = 4/114 (3%)
Query: 7 AERTPHKDEKKKIVSLAPIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGH 66
ERT H+ +V+L PIA+PLA ++L+++ K +++A + K ++RGVKEV K I +G
Sbjct: 20 GERTYHE----LLVNLNPIAQPLASRRLTRKLYKCIKKAVKQKQIRRGVKEVQKFINKGE 75
Query: 67 KGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLV 120
KG+ V+AG+ PI+V H+P++CE+ ++PY+Y+ SK DL A +KRPTC ++V
Sbjct: 76 KGIMVLAGDTLPIEVYCHLPVMCEDRNLPYVYIPSKTDLGAAAGSKRPTCVIMV 129
>sp|Q8I7X7|NHP2_BRABE H/ACA ribonucleoprotein complex subunit 2-like protein
OS=Branchiostoma belcheri PE=2 SV=1
Length = 159
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 85/121 (70%), Gaps = 4/121 (3%)
Query: 24 PIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVIT 83
PIA PLA +KL+KR K V++A++ K +++G+++V K I++G +G+ +IAG+ +PI+V
Sbjct: 39 PIASPLAARKLTKRLYKTVKKASKEKNIRKGIRDVQKFIKKGERGIVLIAGDTTPIEVYC 98
Query: 84 HVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKGELGQEEQDKLKADYTL 143
H+P++CE++ IPY YV +K+DL A +KRPTCCVL+ KP E Q D+ D T
Sbjct: 99 HLPVVCEDAKIPYCYVPAKQDLGEAAGSKRPTCCVLL--KP--NESYQSSYDECLTDVTT 154
Query: 144 V 144
+
Sbjct: 155 L 155
>sp|Q5RC65|NHP2_PONAB H/ACA ribonucleoprotein complex subunit 2 OS=Pongo abelii GN=NHP2
PE=2 SV=1
Length = 153
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 99/155 (63%), Gaps = 12/155 (7%)
Query: 2 GSDSEAER-TPHKDEKKKIVSLAPIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVK 60
G +++AE + + ++ +V+ PIA+PLA ++L+++ K +++A + K ++RGVKEV K
Sbjct: 10 GPEAQAEACSGERTYQELLVNQNPIAQPLASRRLTRKLYKCIKKAVKQKQIRRGVKEVQK 69
Query: 61 SIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLV 120
+ +G KG+ V+AG+ PI+V H+P++CE+ ++PY+Y+ SK DL A +KRPTC ++V
Sbjct: 70 FVNKGEKGIMVLAGDTLPIEVYCHLPVMCEDRNLPYVYIPSKTDLGAAAGSKRPTCVIMV 129
Query: 121 LTKPTKGELGQEEQDKLKADYTLVVEDVKELASSL 155
KP D+ + Y +E+V+ L L
Sbjct: 130 --KP---------HDEYQEAYDECLEEVQSLPLPL 153
>sp|Q9NX24|NHP2_HUMAN H/ACA ribonucleoprotein complex subunit 2 OS=Homo sapiens GN=NHP2
PE=1 SV=1
Length = 153
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 86/120 (71%), Gaps = 1/120 (0%)
Query: 2 GSDSEAER-TPHKDEKKKIVSLAPIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVK 60
G +++AE + + ++ +V+ PIA+PLA ++L+++ K +++A + K ++RGVKEV K
Sbjct: 10 GPEAQAEACSGERTYQELLVNQNPIAQPLASRRLTRKLYKCIKKAVKQKQIRRGVKEVQK 69
Query: 61 SIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLV 120
+ +G KG+ V+AG+ PI+V H+P++CE+ ++PY+Y+ SK DL A +KRPTC ++V
Sbjct: 70 FVNKGEKGIMVLAGDTLPIEVYCHLPVMCEDRNLPYVYIPSKTDLGAAAGSKRPTCVIMV 129
>sp|Q9V3U2|NHP2_DROME H/ACA ribonucleoprotein complex subunit 2-like protein
OS=Drosophila melanogaster GN=NHP2 PE=1 SV=1
Length = 160
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 81/123 (65%), Gaps = 1/123 (0%)
Query: 18 KIVSLAPIAKPLAGKKLSKRTLKLVRRAAEHKC-LKRGVKEVVKSIRRGHKGLCVIAGNI 76
K++ + IAKP+AGKKL+K+ KLV++A +HK L+ G+K+V +R+G G+C+ AG++
Sbjct: 33 KLIFVNAIAKPMAGKKLAKKCYKLVKKAMKHKTFLRNGLKDVQTRLRKGETGICIFAGDV 92
Query: 77 SPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKGELGQEEQDK 136
+P+D++ H+P +CEE IPY Y S+ DL A KR T +LV +L E +++
Sbjct: 93 TPVDIMCHLPAVCEEKGIPYTYTPSRADLGAAMGVKRGTVALLVRQNEEYKDLYDEVKEE 152
Query: 137 LKA 139
L A
Sbjct: 153 LSA 155
>sp|Q6XIP0|NHP2_DROYA H/ACA ribonucleoprotein complex subunit 2-like protein
OS=Drosophila yakuba GN=NHP2 PE=2 SV=1
Length = 160
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 81/123 (65%), Gaps = 1/123 (0%)
Query: 18 KIVSLAPIAKPLAGKKLSKRTLKLVRRAAEHKC-LKRGVKEVVKSIRRGHKGLCVIAGNI 76
K++ + IAKP+AGKKL+K+ KLV++A +HK L+ G+K+V +R+G G+C+ AG++
Sbjct: 33 KLIFVNAIAKPMAGKKLAKKCYKLVKKAMKHKTFLRNGLKDVQTRLRKGETGICIFAGDV 92
Query: 77 SPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKGELGQEEQDK 136
+P+D++ H+P +CEE IPY Y S+ DL A KR T +LV +L E +++
Sbjct: 93 TPVDIMCHLPAVCEEKGIPYAYTPSRADLGAAMGVKRGTVALLVRQNDEYKDLYDEVKEE 152
Query: 137 LKA 139
L A
Sbjct: 153 LSA 155
>sp|Q6PBV6|NHP2_DANRE H/ACA ribonucleoprotein complex subunit 2-like protein OS=Danio
rerio GN=nhp2 PE=2 SV=1
Length = 150
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 87/139 (62%), Gaps = 11/139 (7%)
Query: 13 KDEKKKIVSLAPIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVI 72
K ++ I ++ PIA PLA +KLSK+ K V++AA+ K ++RGVKEV K I +G G+ V
Sbjct: 19 KSYQELIANINPIANPLASRKLSKKLYKCVKKAAKVKQIRRGVKEVQKFINKGETGIVVF 78
Query: 73 AGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKGELGQE 132
AG+ PIDV H+PI+CE+ +PY YV SK DL ++ +KRPTC +++ KP
Sbjct: 79 AGDTLPIDVYCHLPIMCEDRSLPYAYVPSKVDLGSSAGSKRPTCVIMI--KP-------- 128
Query: 133 EQDKLKADYTLVVEDVKEL 151
D+ K Y VE+V L
Sbjct: 129 -HDEYKEAYDECVEEVTSL 146
>sp|O74690|SNU13_SCHPO 13 kDa ribonucleoprotein-associated protein OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=snu13 PE=3 SV=1
Length = 125
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 71/125 (56%)
Query: 20 VSLAPIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPI 79
+S+ P A PLA L+++ L LV++A+ +K L++G E K++ RG V+A + PI
Sbjct: 1 MSVNPKAFPLADSGLTQQILDLVQQASHYKQLRKGANEATKTLNRGISEFIVMAADTEPI 60
Query: 80 DVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKGELGQEEQDKLKA 139
+++ H+P+LCE+ ++PY++V SK L A RP + T L Q + KL
Sbjct: 61 EILLHLPLLCEDKNVPYVFVPSKAALGRACGVSRPVISASITTNEASDLLPQIQAIKLAI 120
Query: 140 DYTLV 144
+ L+
Sbjct: 121 EKLLI 125
>sp|Q6P8E9|NH2L1_XENTR NHP2-like protein 1 OS=Xenopus tropicalis GN=nhp2l1 PE=2 SV=1
Length = 128
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 62/99 (62%), Gaps = 2/99 (2%)
Query: 24 PIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVIT 83
P A PLA +L+K L LV++AA +K L++G E K++ RG V+A + P+++I
Sbjct: 8 PKAYPLADAQLTKTLLDLVQQAANYKQLRKGANEATKTLNRGIAEFIVMAADAEPLEIIL 67
Query: 84 HVPILCEESDIPYIYVASKEDLANAGATKRPT--CCVLV 120
H+P+LCE+ ++PY++V SK+ L A RP C V +
Sbjct: 68 HLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACAVTI 106
>sp|Q9U3Z7|NH2L1_DROME NHP2-like protein 1 homolog OS=Drosophila melanogaster GN=hoip PE=2
SV=1
Length = 127
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 73/128 (57%), Gaps = 9/128 (7%)
Query: 24 PIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVIT 83
P A PLA +L+ + + L+++A + L++G E K++ RG + V+AG+ PI+++
Sbjct: 7 PKAFPLADAQLTAKIMNLLQQALNYNQLRKGANEATKTLNRGLADIVVLAGDAEPIEILL 66
Query: 84 HVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKGELGQEEQDKLKADYTL 143
H+P+LCE+ ++PY++V SK+ L A RP V T E +LK+ T
Sbjct: 67 HLPLLCEDKNVPYVFVRSKQALGRACGVSRPIVACSVTTN---------EGSQLKSQITS 117
Query: 144 VVEDVKEL 151
+ ++++ L
Sbjct: 118 IQQEIERL 125
>sp|Q4P0K3|SNU13_USTMA 13 kDa ribonucleoprotein-associated protein OS=Ustilago maydis
(strain 521 / FGSC 9021) GN=SNU13 PE=3 SV=1
Length = 126
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 68/121 (56%)
Query: 24 PIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVIT 83
P A PLA L+ + L L+++A+ +K LK+G E K++ RG V+A ++ PI+++
Sbjct: 6 PKAFPLADATLTNQILDLIQQASHYKQLKKGANEATKTLNRGICEFIVMAADVEPIEIVL 65
Query: 84 HVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKGELGQEEQDKLKADYTL 143
H+P+LCE+ ++PY++V SK L A RP V T + Q + KL + L
Sbjct: 66 HLPLLCEDKNVPYVFVPSKTALGRACGVSRPVVSASVTTNEARELQSQIQTVKLAIERLL 125
Query: 144 V 144
+
Sbjct: 126 I 126
>sp|Q5XH16|NH2L1_XENLA NHP2-like protein 1 OS=Xenopus laevis GN=nhp2l1 PE=2 SV=1
Length = 128
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 62/99 (62%), Gaps = 2/99 (2%)
Query: 24 PIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVIT 83
P A PLA +L+K L LV+++A +K L++G E K++ RG V+A + P+++I
Sbjct: 8 PKAYPLADAQLTKTLLDLVQQSANYKQLRKGANEATKTLNRGIAEFIVMAADAEPLEIIL 67
Query: 84 HVPILCEESDIPYIYVASKEDLANAGATKRPT--CCVLV 120
H+P+LCE+ ++PY++V SK+ L A RP C V +
Sbjct: 68 HLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACSVTI 106
>sp|P55770|NH2L1_RAT NHP2-like protein 1 OS=Rattus norvegicus GN=Nhp2l1 PE=2 SV=4
Length = 128
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 58/92 (63%)
Query: 24 PIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVIT 83
P A PLA L+K+ L LV+++ +K L++G E K++ RG V+A + P+++I
Sbjct: 8 PKAYPLADAHLTKKLLDLVQQSCNYKQLRKGANEATKTLNRGISEFIVMAADAEPLEIIL 67
Query: 84 HVPILCEESDIPYIYVASKEDLANAGATKRPT 115
H+P+LCE+ ++PY++V SK+ L A RP
Sbjct: 68 HLPLLCEDKNVPYVFVRSKQALGRACGVSRPV 99
>sp|Q9D0T1|NH2L1_MOUSE NHP2-like protein 1 OS=Mus musculus GN=Nhp2l1 PE=2 SV=4
Length = 128
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 58/92 (63%)
Query: 24 PIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVIT 83
P A PLA L+K+ L LV+++ +K L++G E K++ RG V+A + P+++I
Sbjct: 8 PKAYPLADAHLTKKLLDLVQQSCNYKQLRKGANEATKTLNRGISEFIVMAADAEPLEIIL 67
Query: 84 HVPILCEESDIPYIYVASKEDLANAGATKRPT 115
H+P+LCE+ ++PY++V SK+ L A RP
Sbjct: 68 HLPLLCEDKNVPYVFVRSKQALGRACGVSRPV 99
>sp|Q4R5C6|NH2L1_MACFA NHP2-like protein 1 OS=Macaca fascicularis GN=NHP2L1 PE=2 SV=1
Length = 128
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 58/92 (63%)
Query: 24 PIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVIT 83
P A PLA L+K+ L LV+++ +K L++G E K++ RG V+A + P+++I
Sbjct: 8 PKAYPLADAHLTKKLLDLVQQSCNYKQLRKGANEATKTLNRGISEFIVMAADAEPLEIIL 67
Query: 84 HVPILCEESDIPYIYVASKEDLANAGATKRPT 115
H+P+LCE+ ++PY++V SK+ L A RP
Sbjct: 68 HLPLLCEDKNVPYVFVRSKQALGRACGVSRPV 99
>sp|P55769|NH2L1_HUMAN NHP2-like protein 1 OS=Homo sapiens GN=NHP2L1 PE=1 SV=3
Length = 128
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 58/92 (63%)
Query: 24 PIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVIT 83
P A PLA L+K+ L LV+++ +K L++G E K++ RG V+A + P+++I
Sbjct: 8 PKAYPLADAHLTKKLLDLVQQSCNYKQLRKGANEATKTLNRGISEFIVMAADAEPLEIIL 67
Query: 84 HVPILCEESDIPYIYVASKEDLANAGATKRPT 115
H+P+LCE+ ++PY++V SK+ L A RP
Sbjct: 68 HLPLLCEDKNVPYVFVRSKQALGRACGVSRPV 99
>sp|Q3B8S0|NH2L1_BOVIN NHP2-like protein 1 OS=Bos taurus GN=NHP2L1 PE=2 SV=3
Length = 128
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 58/92 (63%)
Query: 24 PIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVIT 83
P A PLA L+K+ L LV+++ +K L++G E K++ RG V+A + P+++I
Sbjct: 8 PKAYPLADAHLTKKLLDLVQQSCNYKQLRKGANEATKTLNRGISEFIVMAADAEPLEIIL 67
Query: 84 HVPILCEESDIPYIYVASKEDLANAGATKRPT 115
H+P+LCE+ ++PY++V SK+ L A RP
Sbjct: 68 HLPLLCEDKNVPYVFVRSKQALGRACGVSRPV 99
>sp|P0CQ52|SNU13_CRYNJ 13 kDa ribonucleoprotein-associated protein OS=Cryptococcus
neoformans var. neoformans serotype D (strain JEC21 /
ATCC MYA-565) GN=SNU13 PE=3 SV=1
Length = 127
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 59/100 (59%)
Query: 24 PIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVIT 83
P A PLA +L+ + L L+++A +K LK+G E K++ RG V+ ++ PI+++
Sbjct: 7 PKAFPLANAQLTNQILDLIQQAQHYKQLKKGANEATKTLNRGICEFIVMTADVEPIEIVL 66
Query: 84 HVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTK 123
H+P+LCE+ ++PY+++ SK L A RP V T
Sbjct: 67 HLPLLCEDKNVPYVFLPSKTALGRACGVSRPVIAASVTTN 106
>sp|P0CQ53|SNU13_CRYNB 13 kDa ribonucleoprotein-associated protein OS=Cryptococcus
neoformans var. neoformans serotype D (strain B-3501A)
GN=SNU13 PE=3 SV=1
Length = 127
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 59/100 (59%)
Query: 24 PIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVIT 83
P A PLA +L+ + L L+++A +K LK+G E K++ RG V+ ++ PI+++
Sbjct: 7 PKAFPLANAQLTNQILDLIQQAQHYKQLKKGANEATKTLNRGICEFIVMTADVEPIEIVL 66
Query: 84 HVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTK 123
H+P+LCE+ ++PY+++ SK L A RP V T
Sbjct: 67 HLPLLCEDKNVPYVFLPSKTALGRACGVSRPVIAASVTTN 106
>sp|Q6FQV5|SNU13_CANGA 13 kDa ribonucleoprotein-associated protein OS=Candida glabrata
(strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /
NRRL Y-65) GN=SNU13 PE=3 SV=1
Length = 126
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 61/100 (61%)
Query: 24 PIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVIT 83
P A PLA +KLS++ L +V++AA + LK+G E K++ RG ++A + PI+++
Sbjct: 6 PKAFPLADEKLSQQILDVVQQAANLRQLKKGANEATKTLNRGISEFIIMAADCEPIEILL 65
Query: 84 HVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTK 123
H+P+LCE+ ++PY++V S+ L A RP + T
Sbjct: 66 HLPLLCEDKNVPYVFVPSRVALGRACGVSRPVIAASITTN 105
>sp|Q6CM69|SNU13_KLULA 13 kDa ribonucleoprotein-associated protein OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=SNU13 PE=3 SV=1
Length = 126
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 59/100 (59%)
Query: 24 PIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVIT 83
P A PLA LS++ L +V++A+ + LK+G E K++ RG ++A + PI+++
Sbjct: 6 PKAFPLADATLSQQILDVVQQASNMRQLKKGANEATKTLNRGISEFIIMAADCEPIEILL 65
Query: 84 HVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTK 123
H+P+LCE+ ++PY++V S+ L A RP + T
Sbjct: 66 HLPLLCEDKNVPYVFVPSRTALGRACGVSRPVIAASITTN 105
>sp|Q6BLQ3|SNU13_DEBHA 13 kDa ribonucleoprotein-associated protein OS=Debaryomyces
hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC
0083 / IGC 2968) GN=SNU13 PE=3 SV=1
Length = 126
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 58/100 (58%)
Query: 24 PIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVIT 83
P A PLA L+++ L +V+++ + LK+G E K++ RG ++A + PI+++
Sbjct: 6 PKAFPLADSALTQQILDVVQQSQNLRQLKKGANEATKTLNRGISEFIIMAADTEPIEILL 65
Query: 84 HVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTK 123
H+P+LCE+ ++PY++V SK L A RP V T
Sbjct: 66 HLPLLCEDKNVPYVFVPSKTALGRACGVSRPVIAASVTTN 105
>sp|Q6C0I0|SNU13_YARLI 13 kDa ribonucleoprotein-associated protein OS=Yarrowia lipolytica
(strain CLIB 122 / E 150) GN=SNU13 PE=3 SV=1
Length = 126
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 56/92 (60%)
Query: 24 PIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVIT 83
P A PLA L+++ L +V++A + LK+G E K++ RG ++A + PI+++
Sbjct: 6 PKAFPLADAALTQQILDIVQQATHLRQLKKGANEATKTLNRGISEFIIMAADAEPIEILL 65
Query: 84 HVPILCEESDIPYIYVASKEDLANAGATKRPT 115
H+P+LCE+ ++PYI+V SK L A RP
Sbjct: 66 HLPLLCEDKNVPYIFVPSKVALGRACGVSRPV 97
>sp|Q54ST0|NH2L1_DICDI NHP2-like protein 1 homolog OS=Dictyostelium discoideum
GN=DDB_G0282243 PE=3 SV=1
Length = 129
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 58/97 (59%), Gaps = 2/97 (2%)
Query: 26 AKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHV 85
AKPLA KL+ L L++++ LK+G E K++ R V+A + P++++ H+
Sbjct: 10 AKPLADSKLTLTILDLIQQSNNLGQLKKGANECTKAVSRSTAEFVVLAADAEPLEILLHI 69
Query: 86 PILCEESDIPYIYVASKEDLANAGATKRPT--CCVLV 120
P+LCE+ +IPY++V+SK +L A RP C V V
Sbjct: 70 PLLCEDKNIPYVFVSSKSELGRACDVSRPVVACAVTV 106
>sp|P39990|SNU13_YEAST 13 kDa ribonucleoprotein-associated protein OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=SNU13 PE=1
SV=1
Length = 126
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 59/100 (59%)
Query: 24 PIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVIT 83
P A PLA L+++ L +V++AA + LK+G E K++ RG ++A + PI+++
Sbjct: 6 PKAFPLADAALTQQILDVVQQAANLRQLKKGANEATKTLNRGISEFIIMAADCEPIEILL 65
Query: 84 HVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTK 123
H+P+LCE+ ++PY++V S+ L A RP + T
Sbjct: 66 HLPLLCEDKNVPYVFVPSRVALGRACGVSRPVIAASITTN 105
>sp|Q757T2|SNU13_ASHGO 13 kDa ribonucleoprotein-associated protein OS=Ashbya gossypii
(strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL
Y-1056) GN=SNU13 PE=3 SV=1
Length = 127
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 59/100 (59%)
Query: 24 PIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVIT 83
P A PLA L+++ L +V++A+ + LK+G E K++ RG ++A + PI+++
Sbjct: 7 PKAFPLADAALTQQILDVVQQASNMRQLKKGANEATKTLNRGISEFIIMAADCEPIEILL 66
Query: 84 HVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTK 123
H+P+LCE+ ++PY++V S+ L A RP + T
Sbjct: 67 HLPLLCEDKNVPYVFVPSRVALGRACGVSRPVIAASITTN 106
>sp|Q5ANL6|SNU13_CANAL 13 kDa ribonucleoprotein-associated protein OS=Candida albicans
(strain SC5314 / ATCC MYA-2876) GN=SNU13 PE=3 SV=1
Length = 126
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 56/91 (61%)
Query: 24 PIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVIT 83
P A PLA L+++ L +V+++ + LK+G E K++ RG ++A + PI+++
Sbjct: 6 PKAFPLADSALTQQILDVVQQSQNLRQLKKGANEATKTLNRGISEFIIMAADTEPIEILL 65
Query: 84 HVPILCEESDIPYIYVASKEDLANAGATKRP 114
H+P+LCE+ ++PY++V SK L A RP
Sbjct: 66 HLPLLCEDKNVPYVFVPSKAALGRACGVSRP 96
>sp|P62427|RL7A_NANEQ 50S ribosomal protein L7Ae OS=Nanoarchaeum equitans (strain Kin4-M)
GN=rpl7ae PE=3 SV=1
Length = 125
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 54/87 (62%)
Query: 24 PIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVIT 83
P K ++L+ + +LVR+A E +++G E K++ RG L +IA N++P +++
Sbjct: 6 PYVKFEVPEELANKVYELVRKARETGKIRKGTNETTKAVERGQAKLVIIAENVNPPEIVM 65
Query: 84 HVPILCEESDIPYIYVASKEDLANAGA 110
H+P LCEE +PY+YV SKE+L A
Sbjct: 66 HLPALCEEKGVPYVYVPSKEELGKAAG 92
>sp|B6YWH9|RL7A_THEON 50S ribosomal protein L7Ae OS=Thermococcus onnurineus (strain NA1)
GN=rpl7ae PE=3 SV=1
Length = 123
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 59/95 (62%), Gaps = 1/95 (1%)
Query: 33 KLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEES 92
+L+++ L+ V A + +++G E K++ RG L +IA ++ P +++ H+P LCEE
Sbjct: 14 ELAEKALEAVELARDTGRIRKGTNETTKAVERGQAKLVIIAEDVDPEEIVAHLPPLCEEK 73
Query: 93 DIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKG 127
+IPYIYV SK++L A + P V ++ +P KG
Sbjct: 74 EIPYIYVPSKKELGAAAGIEVPAASVAII-EPGKG 107
>sp|C3N8Q2|RL7A_SULIY 50S ribosomal protein L7Ae OS=Sulfolobus islandicus (strain
Y.G.57.14 / Yellowstone #1) GN=rpl7ae PE=3 SV=1
Length = 127
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 54/88 (61%)
Query: 34 LSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESD 93
L+ + L+ VR+A E +K+G E K++ RG L VIA ++ P +++ H+P+LC+E
Sbjct: 15 LADKVLEAVRKAKESGKIKKGTNETTKAVERGQAKLVVIAEDVQPEEIVAHLPLLCDEKK 74
Query: 94 IPYIYVASKEDLANAGATKRPTCCVLVL 121
IPY+YV+SK+ L A + T +L
Sbjct: 75 IPYVYVSSKKALGEACGLQVATASAAIL 102
>sp|C3NMR6|RL7A_SULIN 50S ribosomal protein L7Ae OS=Sulfolobus islandicus (strain
Y.N.15.51 / Yellowstone #2) GN=rpl7ae PE=3 SV=1
Length = 127
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 54/88 (61%)
Query: 34 LSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESD 93
L+ + L+ VR+A E +K+G E K++ RG L VIA ++ P +++ H+P+LC+E
Sbjct: 15 LADKVLEAVRKAKESGKIKKGTNETTKAVERGQAKLVVIAEDVQPEEIVAHLPLLCDEKK 74
Query: 94 IPYIYVASKEDLANAGATKRPTCCVLVL 121
IPY+YV+SK+ L A + T +L
Sbjct: 75 IPYVYVSSKKALGEACGLQVATASAAIL 102
>sp|C3MYY9|RL7A_SULIM 50S ribosomal protein L7Ae OS=Sulfolobus islandicus (strain M.14.25
/ Kamchatka #1) GN=rpl7ae PE=3 SV=1
Length = 127
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 54/88 (61%)
Query: 34 LSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESD 93
L+ + L+ VR+A E +K+G E K++ RG L VIA ++ P +++ H+P+LC+E
Sbjct: 15 LADKVLEAVRKAKESGKIKKGTNETTKAVERGQAKLVVIAEDVQPEEIVAHLPLLCDEKK 74
Query: 94 IPYIYVASKEDLANAGATKRPTCCVLVL 121
IPY+YV+SK+ L A + T +L
Sbjct: 75 IPYVYVSSKKALGEACGLQVATASAAIL 102
>sp|C3MJN1|RL7A_SULIL 50S ribosomal protein L7Ae OS=Sulfolobus islandicus (strain
L.S.2.15 / Lassen #1) GN=rpl7ae PE=3 SV=1
Length = 127
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 54/88 (61%)
Query: 34 LSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESD 93
L+ + L+ VR+A E +K+G E K++ RG L VIA ++ P +++ H+P+LC+E
Sbjct: 15 LADKVLEAVRKAKESGKIKKGTNETTKAVERGQAKLVVIAEDVQPEEIVAHLPLLCDEKK 74
Query: 94 IPYIYVASKEDLANAGATKRPTCCVLVL 121
IPY+YV+SK+ L A + T +L
Sbjct: 75 IPYVYVSSKKALGEACGLQVATASAAIL 102
>sp|C4KJ77|RL7A_SULIK 50S ribosomal protein L7Ae OS=Sulfolobus islandicus (strain M.16.4
/ Kamchatka #3) GN=rpl7ae PE=3 SV=1
Length = 127
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 54/88 (61%)
Query: 34 LSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESD 93
L+ + L+ VR+A E +K+G E K++ RG L VIA ++ P +++ H+P+LC+E
Sbjct: 15 LADKVLEAVRKAKESGKIKKGTNETTKAVERGQAKLVVIAEDVQPEEIVAHLPLLCDEKK 74
Query: 94 IPYIYVASKEDLANAGATKRPTCCVLVL 121
IPY+YV+SK+ L A + T +L
Sbjct: 75 IPYVYVSSKKALGEACGLQVATASAAIL 102
>sp|C3N038|RL7A_SULIA 50S ribosomal protein L7Ae OS=Sulfolobus islandicus (strain
M.16.27) GN=rpl7ae PE=3 SV=1
Length = 127
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 54/88 (61%)
Query: 34 LSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESD 93
L+ + L+ VR+A E +K+G E K++ RG L VIA ++ P +++ H+P+LC+E
Sbjct: 15 LADKVLEAVRKAKESGKIKKGTNETTKAVERGQAKLVVIAEDVQPEEIVAHLPLLCDEKK 74
Query: 94 IPYIYVASKEDLANAGATKRPTCCVLVL 121
IPY+YV+SK+ L A + T +L
Sbjct: 75 IPYVYVSSKKALGEACGLQVATASAAIL 102
>sp|P55858|RL7A_SULSO 50S ribosomal protein L7Ae OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=rpl7ae PE=1 SV=2
Length = 127
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 54/88 (61%)
Query: 34 LSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESD 93
L+ + L+ VR+A E +K+G E K++ RG L +IA ++ P +++ H+P+LC+E
Sbjct: 15 LADKVLEAVRKAKESGKIKKGTNETTKAVERGQAKLVIIAEDVQPEEIVAHLPLLCDEKK 74
Query: 94 IPYIYVASKEDLANAGATKRPTCCVLVL 121
IPY+YV+SK+ L A + T +L
Sbjct: 75 IPYVYVSSKKALGEACGLQVATASAAIL 102
>sp|Q971C9|RL7A_SULTO 50S ribosomal protein L7Ae OS=Sulfolobus tokodaii (strain DSM 16993
/ JCM 10545 / NBRC 100140 / 7) GN=rpl7ae PE=3 SV=1
Length = 126
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 48/75 (64%)
Query: 34 LSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESD 93
L+ + L VR+A E +K+G E K++ RG L VIA ++ P +++ H+P+LCEE
Sbjct: 15 LANKVLDAVRKAKESGKIKKGTNETTKAVERGQAKLVVIATDVQPEEIVAHLPLLCEEKK 74
Query: 94 IPYIYVASKEDLANA 108
IPY+YV SK+ L A
Sbjct: 75 IPYVYVPSKKALGEA 89
>sp|Q5JGR3|RL7A_PYRKO 50S ribosomal protein L7Ae OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=rpl7ae PE=3 SV=2
Length = 123
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 56/90 (62%)
Query: 32 KKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEE 91
++L+++ L+ V A + +++G E K++ RG L +IA ++ P +++ H+P LCEE
Sbjct: 13 QELAEKALEAVEIARDTGRIRKGTNETTKAVERGQAKLVIIAEDVDPEEIVAHLPPLCEE 72
Query: 92 SDIPYIYVASKEDLANAGATKRPTCCVLVL 121
+IPY+YV SK++L A + P V ++
Sbjct: 73 KEIPYVYVPSKKELGAAAGLEVPAASVAII 102
>sp|A6UT51|RL7A_META3 50S ribosomal protein L7Ae OS=Methanococcus aeolicus (strain
Nankai-3 / ATCC BAA-1280) GN=rpl7ae PE=3 SV=1
Length = 117
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 47/73 (64%)
Query: 51 LKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGA 110
+K+G EV K++ RG L V+A ++ P +++ H+PI+CEE IPY Y+A+KEDL A
Sbjct: 27 VKKGANEVTKAVERGTAKLVVLAKDVQPEEIVAHIPIICEEKGIPYTYIATKEDLGKAIG 86
Query: 111 TKRPTCCVLVLTK 123
+ T V ++ +
Sbjct: 87 LEVSTAAVAIIAE 99
>sp|P54066|RL7A_METJA 50S ribosomal protein L7Ae OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=rpl7ae PE=1 SV=2
Length = 117
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 53/90 (58%)
Query: 40 KLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYV 99
+L+ A+ + +K+G EV K++ RG L +IA ++ P +V+ H+P LCEE IPY YV
Sbjct: 16 ELLDAVAKAQKIKKGANEVTKAVERGIAKLVIIAEDVKPEEVVAHLPYLCEEKGIPYAYV 75
Query: 100 ASKEDLANAGATKRPTCCVLVLTKPTKGEL 129
ASK+DL A + V ++ + EL
Sbjct: 76 ASKQDLGKAAGLEVAASSVAIINEGDAEEL 105
>sp|Q21568|NH2L1_CAEEL NHP2-like protein 1 homolog OS=Caenorhabditis elegans GN=M28.5 PE=3
SV=1
Length = 128
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 72/128 (56%), Gaps = 9/128 (7%)
Query: 24 PIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVIT 83
P A PLA LS++ + LV++A +K LK+G E K++ RG + V+A + P++++
Sbjct: 8 PKAFPLADTNLSQKLMDLVQQAMNYKQLKKGANEATKTLNRGISEIIVMAADAEPLEILL 67
Query: 84 HVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKGELGQEEQDKLKADYTL 143
H+P+LCE+ ++PY++V SK L A RP + Q E +LK+
Sbjct: 68 HLPLLCEDKNVPYVFVRSKAALGRACGVTRPVIA---------ASITQNEGSQLKSQIQK 118
Query: 144 VVEDVKEL 151
+ EDV++L
Sbjct: 119 IKEDVEKL 126
>sp|O29494|RL7A_ARCFU 50S ribosomal protein L7Ae OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=rpl7ae PE=1 SV=1
Length = 119
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 34 LSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESD 93
+ L L+ + E +K+G E K++ RG L IA ++ P +++ H+P+LCEE +
Sbjct: 11 MQNEALSLLEKVRESGKVKKGTNETTKAVERGLAKLVYIAEDVDPPEIVAHLPLLCEEKN 70
Query: 94 IPYIYVASKEDLANAGATKRPTCCVLVLTKPTKGELGQE 132
+PYIYV SK DL A + P ++ +GEL +E
Sbjct: 71 VPYIYVKSKNDLGRAVGIEVPCASAAII---NEGELRKE 106
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.133 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,535,556
Number of Sequences: 539616
Number of extensions: 2118710
Number of successful extensions: 5163
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 123
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 5035
Number of HSP's gapped (non-prelim): 146
length of query: 156
length of database: 191,569,459
effective HSP length: 107
effective length of query: 49
effective length of database: 133,830,547
effective search space: 6557696803
effective search space used: 6557696803
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 56 (26.2 bits)