Query 031619
Match_columns 156
No_of_seqs 131 out of 1901
Neff 10.7
Searched_HMMs 29240
Date Mon Mar 25 04:14:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031619.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031619hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 100.0 2.2E-31 7.6E-36 173.6 15.2 133 12-154 14-146 (169)
2 1awc_B Protein (GA binding pro 100.0 4.6E-28 1.6E-32 155.1 14.1 131 13-154 13-143 (153)
3 2y1l_E Darpin-8.4; hydrolase-i 100.0 1.5E-27 5E-32 155.2 15.3 132 13-154 25-156 (169)
4 4b93_B Ankyrin repeat domain-c 100.0 4.7E-28 1.6E-32 168.5 11.9 109 37-153 119-227 (269)
5 3v31_A Ankyrin repeat family A 100.0 3.5E-27 1.2E-31 152.9 15.0 133 12-154 13-145 (167)
6 3twr_A Tankyrase-2; ankyrin re 100.0 3.2E-27 1.1E-31 152.8 14.1 130 15-153 21-150 (165)
7 3v30_A DNA-binding protein rfx 100.0 5.3E-27 1.8E-31 152.7 15.0 133 13-154 13-145 (172)
8 1ihb_A P18-INK4C(INK6), cyclin 100.0 2.8E-27 9.7E-32 152.5 13.4 132 13-154 16-147 (162)
9 2rfm_A Putative ankyrin repeat 100.0 3.6E-27 1.2E-31 156.1 13.7 131 14-154 47-177 (192)
10 4gpm_A Engineered protein OR26 100.0 4.3E-27 1.5E-31 153.3 13.8 108 39-154 6-113 (169)
11 3f6q_A Integrin-linked protein 100.0 7.1E-27 2.4E-31 153.2 14.7 131 14-154 17-148 (179)
12 3aaa_C Myotrophin, protein V-1 100.0 3.3E-27 1.1E-31 146.1 12.4 111 35-153 5-115 (123)
13 3c5r_A BARD-1, BRCA1-associate 99.9 2.3E-27 7.8E-32 149.3 11.7 113 33-153 6-118 (137)
14 1d9s_A Cyclin-dependent kinase 99.9 1.1E-27 3.6E-32 150.7 9.9 117 29-154 4-121 (136)
15 2jab_A H10-2-G3; HER2, darpin, 99.9 6.3E-27 2.2E-31 147.2 12.9 114 33-154 10-123 (136)
16 4b93_B Ankyrin repeat domain-c 99.9 3E-27 1E-31 164.5 11.9 132 13-154 64-195 (269)
17 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1.3E-26 4.5E-31 148.6 14.1 130 14-154 14-143 (156)
18 2dzn_A Probable 26S proteasome 99.9 1.9E-26 6.6E-31 156.0 14.1 132 14-153 84-217 (228)
19 3jxi_A Vanilloid receptor-rela 99.9 9.1E-27 3.1E-31 160.7 11.2 142 12-154 59-235 (260)
20 2vge_A RELA-associated inhibit 99.9 3.4E-26 1.2E-30 155.7 13.8 125 19-151 2-128 (229)
21 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1.2E-26 4.2E-31 158.6 11.7 129 12-151 15-144 (239)
22 2etb_A Transient receptor pote 99.9 1.4E-26 4.8E-31 159.5 12.0 141 13-154 57-231 (256)
23 3hra_A Ankyrin repeat family p 99.9 8.6E-26 2.9E-30 150.2 14.8 131 14-153 51-187 (201)
24 2pnn_A Transient receptor pote 99.9 1.8E-26 6.3E-31 160.3 12.0 141 13-154 68-243 (273)
25 2dzn_A Probable 26S proteasome 99.9 5.8E-26 2E-30 153.6 14.1 134 13-154 47-184 (228)
26 2rfa_A Transient receptor pote 99.9 7.3E-26 2.5E-30 153.6 14.0 131 13-153 14-163 (232)
27 3aji_A 26S proteasome non-ATPa 99.9 1.2E-25 4.2E-30 152.4 14.4 128 15-152 86-213 (231)
28 3deo_A Signal recognition part 99.9 8.4E-26 2.9E-30 148.7 12.8 111 35-154 42-153 (183)
29 1yyh_A HN1;, notch 1, ankyrin 99.9 7.9E-26 2.7E-30 155.7 13.2 128 16-153 104-232 (253)
30 2rfa_A Transient receptor pote 99.9 2.3E-25 7.7E-30 151.2 15.0 140 13-154 48-207 (232)
31 3aji_A 26S proteasome non-ATPa 99.9 1.9E-25 6.4E-30 151.5 14.4 130 14-153 52-181 (231)
32 1oy3_D Transcription factor in 99.9 1.4E-25 4.7E-30 156.0 13.7 116 30-153 151-267 (282)
33 1yyh_A HN1;, notch 1, ankyrin 99.9 9.8E-26 3.3E-30 155.2 12.8 131 14-153 69-199 (253)
34 2f8y_A Notch homolog 1, transl 99.9 3.1E-25 1.1E-29 149.6 15.0 129 15-152 38-166 (223)
35 3b7b_A Euchromatic histone-lys 99.9 2E-25 7E-30 151.8 14.1 130 14-153 89-219 (237)
36 1bi7_B P16INK4A, MTS1, multipl 99.9 2.4E-26 8.1E-31 147.7 8.6 129 14-153 24-153 (156)
37 1n0r_A 4ANK, 4 ankyrin repeats 99.9 2.1E-25 7.2E-30 137.8 12.5 110 37-154 2-111 (126)
38 1oy3_D Transcription factor in 99.9 1.9E-25 6.5E-30 155.2 13.7 130 14-153 57-234 (282)
39 2f8y_A Notch homolog 1, transl 99.9 4.8E-25 1.6E-29 148.7 14.9 132 13-154 69-201 (223)
40 1k1a_A B-cell lymphoma 3-encod 99.9 2.3E-25 7.8E-30 151.7 13.4 131 15-153 92-225 (241)
41 2xai_A ASB-9, ankyrin repeat a 99.9 2.6E-25 8.8E-30 153.8 13.6 128 14-153 81-208 (261)
42 3hra_A Ankyrin repeat family p 99.9 5.1E-25 1.8E-29 146.4 14.5 132 12-153 16-149 (201)
43 1ikn_D Protein (I-kappa-B-alph 99.9 1.4E-25 4.8E-30 152.8 12.0 131 13-153 56-193 (236)
44 3ui2_A Signal recognition part 99.9 2.1E-25 7.3E-30 153.0 12.7 112 35-155 43-155 (244)
45 1s70_B 130 kDa myosin-binding 99.9 4.9E-25 1.7E-29 154.6 14.4 85 14-101 52-136 (299)
46 2xai_A ASB-9, ankyrin repeat a 99.9 6.8E-25 2.3E-29 151.7 14.8 129 14-153 15-143 (261)
47 2rfm_A Putative ankyrin repeat 99.9 1.6E-25 5.4E-30 148.2 10.8 116 31-154 29-144 (192)
48 2y1l_E Darpin-8.4; hydrolase-i 99.9 7E-25 2.4E-29 142.5 13.7 113 34-154 11-123 (169)
49 1s70_B 130 kDa myosin-binding 99.9 3.7E-25 1.3E-29 155.2 13.3 131 13-153 84-274 (299)
50 4hbd_A KN motif and ankyrin re 99.9 2.9E-25 9.9E-30 154.9 12.4 132 13-154 122-260 (276)
51 3v31_A Ankyrin repeat family A 99.9 3.4E-25 1.2E-29 143.5 11.9 111 36-154 2-112 (167)
52 2etb_A Transient receptor pote 99.9 1.4E-25 4.8E-30 154.5 10.6 130 16-153 20-181 (256)
53 1bi7_B P16INK4A, MTS1, multipl 99.9 5.5E-26 1.9E-30 146.0 8.0 114 32-154 7-121 (156)
54 1n11_A Ankyrin; clathrin, BAND 99.9 5.5E-25 1.9E-29 161.8 14.3 132 13-154 256-387 (437)
55 3b7b_A Euchromatic histone-lys 99.9 1.2E-24 4.2E-29 147.9 14.7 131 14-153 56-186 (237)
56 3t8k_A Uncharacterized protein 99.9 6.5E-26 2.2E-30 149.8 8.0 112 35-154 36-164 (186)
57 3kea_A K1L; tropism, ANK repea 99.9 5.1E-25 1.7E-29 154.2 12.7 132 8-153 6-138 (285)
58 1k1a_A B-cell lymphoma 3-encod 99.9 2.4E-24 8.2E-29 146.7 15.4 132 13-154 57-193 (241)
59 3f6q_A Integrin-linked protein 99.9 6.9E-25 2.4E-29 143.7 12.2 113 35-154 3-115 (179)
60 3ehr_A Osteoclast-stimulating 99.9 1.9E-25 6.6E-30 150.9 9.7 110 36-153 72-182 (222)
61 3d9h_A CDNA FLJ77766, highly s 99.9 1.2E-24 4.3E-29 152.2 14.0 128 14-153 137-264 (285)
62 1sw6_A Regulatory protein SWI6 99.9 4.6E-25 1.6E-29 157.2 11.9 131 14-153 109-325 (327)
63 3twr_A Tankyrase-2; ankyrin re 99.9 1.3E-24 4.4E-29 140.5 12.6 114 34-154 5-118 (165)
64 3ljn_A Hypothetical protein; a 99.9 6.2E-25 2.1E-29 158.2 11.4 113 34-154 135-254 (364)
65 1n0q_A 3ANK, 3 ankyrin repeats 99.9 1.6E-24 5.4E-29 127.7 11.2 92 37-129 2-93 (93)
66 3d9h_A CDNA FLJ77766, highly s 99.9 2.5E-24 8.6E-29 150.7 14.0 129 14-153 71-199 (285)
67 3jxi_A Vanilloid receptor-rela 99.9 8.5E-25 2.9E-29 150.8 11.1 129 17-153 24-185 (260)
68 2b0o_E UPLC1; arfgap, structur 99.9 1.5E-24 5.3E-29 153.0 12.5 110 36-153 150-268 (301)
69 1bd8_A P19INK4D CDK4/6 inhibit 99.9 2.9E-24 9.9E-29 137.6 12.4 110 37-154 2-111 (156)
70 3kea_A K1L; tropism, ANK repea 99.9 7.8E-25 2.7E-29 153.3 10.5 113 13-130 42-155 (285)
71 1ihb_A P18-INK4C(INK6), cyclin 99.9 1.2E-24 4E-29 140.2 10.3 109 37-154 5-113 (162)
72 1wdy_A 2-5A-dependent ribonucl 99.9 9.9E-24 3.4E-28 146.4 15.6 135 13-154 116-263 (285)
73 1wdy_A 2-5A-dependent ribonucl 99.9 8.8E-24 3E-28 146.7 15.2 140 13-154 16-158 (285)
74 1awc_B Protein (GA binding pro 99.9 4.1E-24 1.4E-28 136.7 12.5 109 37-154 2-110 (153)
75 1ikn_D Protein (I-kappa-B-alph 99.9 4.8E-25 1.6E-29 150.1 8.3 130 17-154 23-161 (236)
76 3v30_A DNA-binding protein rfx 99.9 4.5E-24 1.5E-28 138.8 12.0 125 13-147 47-171 (172)
77 1n11_A Ankyrin; clathrin, BAND 99.9 6.5E-24 2.2E-28 156.1 14.2 132 13-154 223-354 (437)
78 2vge_A RELA-associated inhibit 99.9 6.1E-25 2.1E-29 149.5 8.1 138 13-153 32-197 (229)
79 1d9s_A Cyclin-dependent kinase 99.9 2.1E-24 7.3E-29 135.6 10.0 114 12-129 22-136 (136)
80 3ljn_A Hypothetical protein; a 99.9 5.4E-24 1.8E-28 153.3 13.4 130 14-153 32-220 (364)
81 2jab_A H10-2-G3; HER2, darpin, 99.9 1.5E-23 5E-28 131.7 13.1 112 13-127 25-136 (136)
82 2l6b_A NR1C; ankyrin, consensu 99.9 1.9E-24 6.4E-29 132.0 8.6 107 34-148 6-112 (115)
83 2b0o_E UPLC1; arfgap, structur 99.9 1.9E-23 6.5E-28 147.4 14.9 126 15-154 164-296 (301)
84 3utm_A Tankyrase-1; tankyrase, 99.9 1.2E-23 4.2E-28 150.0 13.9 112 35-154 209-323 (351)
85 3utm_A Tankyrase-1; tankyrase, 99.9 1.4E-23 4.8E-28 149.7 14.2 132 12-153 35-166 (351)
86 4hbd_A KN motif and ankyrin re 99.9 1.5E-24 5.3E-29 151.2 8.8 126 21-154 95-226 (276)
87 3lvq_E ARF-GAP with SH3 domain 99.9 1.9E-23 6.6E-28 156.3 14.9 108 38-153 133-249 (497)
88 1dcq_A PYK2-associated protein 99.9 2.8E-23 9.5E-28 145.1 14.7 111 35-153 128-247 (278)
89 2pnn_A Transient receptor pote 99.9 9E-24 3.1E-28 146.7 12.0 112 34-153 51-193 (273)
90 3eu9_A Huntingtin-interacting 99.9 6.3E-23 2.2E-27 139.2 15.1 131 13-153 20-151 (240)
91 3lvq_E ARF-GAP with SH3 domain 99.9 2.2E-23 7.4E-28 156.0 13.5 118 13-131 143-267 (497)
92 1n0r_A 4ANK, 4 ankyrin repeats 99.9 8.4E-23 2.9E-27 126.0 13.3 114 13-129 13-126 (126)
93 3eu9_A Huntingtin-interacting 99.9 5.1E-23 1.7E-27 139.7 13.0 130 15-154 89-220 (240)
94 2fo1_E LIN-12 protein; beta-ba 99.9 2.7E-23 9.1E-28 150.5 11.9 131 15-153 212-355 (373)
95 3jue_A Arfgap with coiled-coil 99.9 5.5E-23 1.9E-27 148.5 13.1 109 38-154 200-311 (368)
96 4g8k_A 2-5A-dependent ribonucl 99.9 1.2E-22 4E-27 144.9 14.4 135 13-154 136-283 (337)
97 1dcq_A PYK2-associated protein 99.9 2E-22 6.7E-27 140.8 13.7 114 16-130 144-264 (278)
98 2fo1_E LIN-12 protein; beta-ba 99.9 7.7E-23 2.6E-27 148.0 12.0 127 17-153 181-322 (373)
99 3jue_A Arfgap with coiled-coil 99.9 2E-22 6.9E-27 145.6 13.5 137 13-154 211-347 (368)
100 1ycs_B 53BP2, P53BP2; ankyrin 99.9 5E-23 1.7E-27 140.7 9.0 138 13-153 48-190 (239)
101 4g8k_A 2-5A-dependent ribonucl 99.9 1.7E-21 5.7E-26 139.0 13.7 139 13-153 36-177 (337)
102 3t8k_A Uncharacterized protein 99.9 3.5E-22 1.2E-26 131.9 7.8 107 37-153 6-124 (186)
103 3ehr_A Osteoclast-stimulating 99.9 4.7E-22 1.6E-26 134.3 8.3 116 14-131 85-200 (222)
104 1n0q_A 3ANK, 3 ankyrin repeats 99.9 2.4E-21 8.3E-26 113.9 9.1 78 70-154 1-78 (93)
105 3aaa_C Myotrophin, protein V-1 99.9 3.1E-21 1E-25 119.0 9.1 103 12-117 17-119 (123)
106 2zgd_A 3 repeat synthetic anky 99.9 1.5E-20 5E-25 114.0 11.3 90 33-123 20-109 (110)
107 3c5r_A BARD-1, BRCA1-associate 99.9 9.5E-22 3.3E-26 123.4 6.2 114 13-129 21-134 (137)
108 1sw6_A Regulatory protein SWI6 99.8 1E-21 3.6E-26 139.9 6.7 133 13-153 58-210 (327)
109 3ui2_A Signal recognition part 99.8 5E-20 1.7E-24 126.2 11.4 113 13-129 56-185 (244)
110 3deo_A Signal recognition part 99.8 7.8E-20 2.7E-24 120.1 11.5 100 14-117 56-156 (183)
111 2aja_A Ankyrin repeat family p 99.8 3.9E-21 1.3E-25 139.2 2.2 108 36-152 91-206 (376)
112 2zgd_A 3 repeat synthetic anky 99.8 1.2E-19 4.2E-24 109.9 8.2 83 65-154 18-100 (110)
113 2l6b_A NR1C; ankyrin, consensu 99.8 2.6E-19 8.9E-24 109.0 7.4 82 66-154 4-85 (115)
114 2aja_A Ankyrin repeat family p 99.8 2.3E-20 7.8E-25 135.2 0.6 125 13-153 103-234 (376)
115 2cos_A Serine/threonine protei 47.9 20 0.0007 18.0 2.6 35 118-155 11-45 (54)
116 3zrh_A Ubiquitin thioesterase 37.6 93 0.0032 23.0 5.7 48 44-92 29-90 (454)
117 1gp8_A Protein (scaffolding pr 33.1 41 0.0014 15.5 2.4 17 41-57 17-33 (40)
118 1veg_A NEDD8 ultimate buster-1 20.1 1.1E+02 0.0039 16.7 2.9 41 83-129 29-70 (83)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.98 E-value=2.2e-31 Score=173.59 Aligned_cols=133 Identities=29% Similarity=0.454 Sum_probs=123.7
Q ss_pred CChHHHhHHHHhcCCccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHH
Q 031619 12 DDSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLL 91 (156)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll 91 (156)
.+..+.++.+++.|.++|.. +..+.||||+|+..++.++++++++. |++++.++..|+||||+|+..++.+++++|+
T Consensus 14 ~G~~~~v~~Ll~~Gadvn~~--d~~g~t~l~~a~~~~~~~~~~~ll~~-gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll 90 (169)
T 4gpm_A 14 NGNKDRVKDLIENGADVNAS--DSDGRTPLHHAAENGHKEVVKLLISK-GADVNAKDSDGRTPLHHAAENGHKEVVKLLI 90 (169)
T ss_dssp TTCHHHHHHHHHTTCCTTCC--CTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred cCCHHHHHHHHHCCCCCCCc--CCCCCCHHHHHHHcCCHHHHHHHHhc-ccchhhhccCCCCHHHHHHHcCCHHHHHHHH
Confidence 45677888899999887654 45788999999999999999999998 9999999999999999999999999999999
Q ss_pred HcCCCCCccCCCCCChHHHHHhCChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhhh
Q 031619 92 ERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQNDL 154 (156)
Q Consensus 92 ~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~~ 154 (156)
+.|++++.+|..|.||||+|+..|+.+++++|+++|++++ .+|.+|+||||+|++.
T Consensus 91 ~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~-------~~d~~G~TpL~~A~~~ 146 (169)
T 4gpm_A 91 SKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVN-------TSDSDGRTPLDLAREH 146 (169)
T ss_dssp HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-------CCCTTSCCHHHHHHHT
T ss_pred HCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-------ccCCCCCCHHHHHHHc
Confidence 9999999999999999999999999999999999999985 8999999999999863
No 2
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.96 E-value=4.6e-28 Score=155.12 Aligned_cols=131 Identities=25% Similarity=0.248 Sum_probs=120.3
Q ss_pred ChHHHhHHHHhcCCccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHH
Q 031619 13 DSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLE 92 (156)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~ 92 (156)
+..+.++++++.|.+.+ .+..+.||||.|+..|+.+++++|++. |++++.++..|.||||+|+..++.+++++|++
T Consensus 13 g~~~~v~~Ll~~g~~~~---~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 88 (153)
T 1awc_B 13 GQDDEVRILMANGAPFT---TDWLGTSPLHLAAQYGHFSTTEVLLRA-GVSRDARTKVDRTPLHMAASEGHANIVEVLLK 88 (153)
T ss_dssp TCHHHHHHHHHHTCCCC---CCTTCCCHHHHHHHHTCHHHHHHHHTT-TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHT
T ss_pred CCHHHHHHHHHcCCCCC---cCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcChHHHHHHHHH
Confidence 45667788888888665 255788999999999999999999998 99999999999999999999999999999999
Q ss_pred cCCCCCccCCCCCChHHHHHhCChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhhh
Q 031619 93 RGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQNDL 154 (156)
Q Consensus 93 ~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~~ 154 (156)
.|++++.+|..|.||||+|+..++.+++++|+++|++++ .+|..|.||||+|++.
T Consensus 89 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-------~~~~~g~t~l~~A~~~ 143 (153)
T 1awc_B 89 HGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVH-------TQSKFCKTAFDISIDN 143 (153)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-------CCCTTSCCHHHHHHHT
T ss_pred cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-------ccCCCCCCHHHHHHHc
Confidence 999999999999999999999999999999999999984 8999999999999763
No 3
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.96 E-value=1.5e-27 Score=155.20 Aligned_cols=132 Identities=28% Similarity=0.437 Sum_probs=121.6
Q ss_pred ChHHHhHHHHhcCCccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHH
Q 031619 13 DSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLE 92 (156)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~ 92 (156)
+..+.++++++.|.+++.. +..+.||||.|+..++.+++++|++. |++++.++..|.||||+|+..++.+++++|++
T Consensus 25 g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~ 101 (169)
T 2y1l_E 25 GRDDEVRILMANGADVNAE--DASGWTPLHLAAFNGHLEIVEVLLKN-GADVNAVDHAGMTPLRLAALFGHLEIVEVLLK 101 (169)
T ss_dssp TCHHHHHHHHHTTCCTTCC--CTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHCCCCCCCC--CCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 4566788889988877644 45788999999999999999999998 99999999999999999999999999999999
Q ss_pred cCCCCCccCCCCCChHHHHHhCChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhhh
Q 031619 93 RGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQNDL 154 (156)
Q Consensus 93 ~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~~ 154 (156)
.|++++.+|..|.||||+|+..++.+++++|+++|++++ .+|..|.|||++|++.
T Consensus 102 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------~~~~~g~t~l~~A~~~ 156 (169)
T 2y1l_E 102 NGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVN-------AQDKFGKTAFDISIDN 156 (169)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-------CCCTTSCCHHHHHHHT
T ss_pred cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-------CcCCCCCCHHHHHHHh
Confidence 999999999999999999999999999999999999984 8999999999999763
No 4
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.95 E-value=4.7e-28 Score=168.51 Aligned_cols=109 Identities=26% Similarity=0.374 Sum_probs=83.3
Q ss_pred hHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCChHHHHHhCCh
Q 031619 37 HLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGF 116 (156)
Q Consensus 37 ~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~tpL~~a~~~~~ 116 (156)
+.+|++.|+..++.+++++|++. |++++.++..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..|+
T Consensus 119 g~t~l~~a~~~~~~~~~~~Ll~~-g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~ 197 (269)
T 4b93_B 119 QAVPLHLACQQGHFQVVKCLLDS-NAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKH 197 (269)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHT-TCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTC
T ss_pred CCCccccccccChHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCC
Confidence 34444444444555555555555 66777777788888888888888888888888888888888888888888888888
Q ss_pred HHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhh
Q 031619 117 IEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQND 153 (156)
Q Consensus 117 ~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~ 153 (156)
.+++++|+++|+++ +.+|.+|+||||+|++
T Consensus 198 ~~~v~~Ll~~Gad~-------~~~d~~G~TpL~~A~~ 227 (269)
T 4b93_B 198 VFVVELLLLHGASV-------QVLNKRQRTAVDCAEQ 227 (269)
T ss_dssp HHHHHHHHHTTCCS-------CCCCTTSCCSGGGSCT
T ss_pred HHHHHHHHHCCCCC-------CCcCCCCCCHHHHHHh
Confidence 88888888888887 4888888888888864
No 5
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.95 E-value=3.5e-27 Score=152.93 Aligned_cols=133 Identities=23% Similarity=0.275 Sum_probs=121.0
Q ss_pred CChHHHhHHHHhcCCccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHH
Q 031619 12 DDSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLL 91 (156)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll 91 (156)
.+..+.++.+++.+.+++. .+..+.||||+|+..|+.+++++|++. |++++.++..|.||||+|+..++.+++++|+
T Consensus 13 ~g~~~~v~~ll~~~~~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 89 (167)
T 3v31_A 13 QGEMLYLATRIEQENVINH--TDEEGFTPLMWAAAHGQIAVVEFLLQN-GADPQLLGKGRESALSLACSKGYTDIVKMLL 89 (167)
T ss_dssp TTCHHHHHHHHHHSSCTTC--CCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHH
T ss_pred CCCHHHHHHHHHcCCCcCC--CCCCCCCHHHHHHHCCCHHHHHHHHHc-CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHH
Confidence 3456677778888876544 455788999999999999999999999 9999999999999999999999999999999
Q ss_pred HcCCCCCccCCCCCChHHHHHhCChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhhh
Q 031619 92 ERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQNDL 154 (156)
Q Consensus 92 ~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~~ 154 (156)
+.|++++.+|..|.||||+|+..++.+++++|+++|++++ .++..|.||||+|++.
T Consensus 90 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------~~~~~g~t~l~~A~~~ 145 (167)
T 3v31_A 90 DCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPT-------IETDSGYNSMDLAVAL 145 (167)
T ss_dssp HHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-------CCCTTSCCHHHHHHHH
T ss_pred HCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-------CcCCCCCCHHHHHHHc
Confidence 9999999999999999999999999999999999999985 8999999999999864
No 6
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.95 E-value=3.2e-27 Score=152.83 Aligned_cols=130 Identities=24% Similarity=0.303 Sum_probs=115.1
Q ss_pred HHHhHHHHhcCCccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHHcC
Q 031619 15 EEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLERG 94 (156)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~ 94 (156)
.+.++.+++.+. .+....+..+.||||+|+..++.+++++|++. |++++.++..|.||||+|+..++.+++++|++.|
T Consensus 21 ~~~v~~ll~~~~-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 98 (165)
T 3twr_A 21 VETVKKLCTVQS-VNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQH-GADVHAKDKGGLVPLHNACSYGHYEVAELLVKHG 98 (165)
T ss_dssp HHHHHHHCCTTT-TTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred HHHHHHHHHcCC-CCccccccCCCCHHHHHHHcChHHHHHHHHhc-CCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCC
Confidence 344455554322 34445556778999999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCccCCCCCChHHHHHhCChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhh
Q 031619 95 ASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQND 153 (156)
Q Consensus 95 ~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~ 153 (156)
++++.+|..|.||||+|+..++.+++++|+++|++++ .+|.+|.||||+|++
T Consensus 99 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-------~~~~~g~t~l~~a~~ 150 (165)
T 3twr_A 99 AVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPT-------KKNRDGNTPLDLVKD 150 (165)
T ss_dssp CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-------CCCTTSCCTGGGSCT
T ss_pred CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc-------ccCCCCCChhHhHhc
Confidence 9999999999999999999999999999999999984 899999999999864
No 7
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.95 E-value=5.3e-27 Score=152.73 Aligned_cols=133 Identities=23% Similarity=0.305 Sum_probs=118.4
Q ss_pred ChHHHhHHHHhcCCccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHH
Q 031619 13 DSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLE 92 (156)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~ 92 (156)
+..+.++.+++.+... .+..+..+.||||+|+..|+.+++++|++. |++++.++..|.||||+|+..++.+++++|++
T Consensus 13 g~~~~v~~ll~~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 90 (172)
T 3v30_A 13 GELDQLKEHLRKGDNL-VNKPDERGFTPLIWASAFGEIETVRFLLEW-GADPHILAKERESALSLASTGGYTDIVGLLLE 90 (172)
T ss_dssp TCHHHHHHHHTTCSGG-GGCCCTTSCCHHHHHHHTTCHHHHHHHHHH-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHT
T ss_pred CCHHHHHHHHHcCccc-ccCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCchhhcccCCCHHHHHHHCCCHHHHHHHHH
Confidence 3445566666666541 233456788999999999999999999999 99999999999999999999999999999999
Q ss_pred cCCCCCccCCCCCChHHHHHhCChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhhh
Q 031619 93 RGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQNDL 154 (156)
Q Consensus 93 ~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~~ 154 (156)
.|++++.+|..|.||||+|+..++.+++++|+++|++++ .+|..|.||||+|++.
T Consensus 91 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-------~~~~~g~t~l~~A~~~ 145 (172)
T 3v30_A 91 RDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLT-------TEADSGYTPMDLAVAL 145 (172)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-------CCCTTSCCHHHHHHHH
T ss_pred cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-------ccCCCCCCHHHHHHHh
Confidence 999999999999999999999999999999999999985 8999999999999864
No 8
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.95 E-value=2.8e-27 Score=152.50 Aligned_cols=132 Identities=23% Similarity=0.331 Sum_probs=119.7
Q ss_pred ChHHHhHHHHhcCCccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHH
Q 031619 13 DSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLE 92 (156)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~ 92 (156)
+..+.++++++.|.+++.. +..+.||||.|+. ++.+++++|++. |++++.++..|.||||+|+..++.+++++|++
T Consensus 16 g~~~~v~~Ll~~~~~~~~~--~~~g~t~L~~A~~-~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 91 (162)
T 1ihb_A 16 GDLEQLTSLLQNNVNVNAQ--NGFGRTALQVMKL-GNPEIARRLLLR-GANPDLKDRTGFAVIHDAARAGFLDTLQTLLE 91 (162)
T ss_dssp TCHHHHHHHTTSCCCTTCC--CTTSCCHHHHCCS-SCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred CCHHHHHHHHhCCCCcccc--CccCccHHHHHHc-CcHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 4566778888888776543 5578899999999 999999999999 99999999999999999999999999999999
Q ss_pred cCCCCCccCCCCCChHHHHHhCChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhhh
Q 031619 93 RGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQNDL 154 (156)
Q Consensus 93 ~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~~ 154 (156)
.|++++.+|..|.||||+|+..++.+++++|+++|++. ++.++..|.||||+|++.
T Consensus 92 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~------~~~~~~~g~t~l~~A~~~ 147 (162)
T 1ihb_A 92 FQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASN------VGHRNHKGDTACDLARLY 147 (162)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCC------TTCCCTTSCCHHHHHHHT
T ss_pred cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCC------CCCcCCCCCcHHHHHHHc
Confidence 99999999999999999999999999999999999985 258999999999999864
No 9
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.95 E-value=3.6e-27 Score=156.13 Aligned_cols=131 Identities=21% Similarity=0.215 Sum_probs=119.0
Q ss_pred hHHHhHHHHhcCCccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHHc
Q 031619 14 SEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLER 93 (156)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~ 93 (156)
..+.++++++.+.+++. .+..+.||||+|+..++.+++++|++. |++++.++..|.||||+|+..++.+++++|++.
T Consensus 47 ~~~~v~~Ll~~~~~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 123 (192)
T 2rfm_A 47 MENAIDKLVENFDKLED--KDIEGSTALIWAVKNNRLGIAEKLLSK-GSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEH 123 (192)
T ss_dssp CGGGHHHHHHHHCCTTC--CCTTSCCHHHHHHHTTCHHHHHHHHHH-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT
T ss_pred CHHHHHHHHHhcccccc--ccccCccHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHC
Confidence 45567778888776654 345788999999999999999999999 999999999999999999999999999999999
Q ss_pred CCCCCccCCCCCChHHHHHhCChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhhh
Q 031619 94 GASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQNDL 154 (156)
Q Consensus 94 ~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~~ 154 (156)
|++++.+|..|.||||+|+..++.+++++|+++|++++ .+|..|.||+|+|+..
T Consensus 124 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-------~~~~~g~t~l~~A~~~ 177 (192)
T 2rfm_A 124 GANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADIS-------ARDLTGLTAEASARIF 177 (192)
T ss_dssp TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT-------CBCTTSCBHHHHHHHT
T ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-------CcCCCCCCHHHHHHHh
Confidence 99999999999999999999999999999999999985 8999999999999753
No 10
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.95 E-value=4.3e-27 Score=153.27 Aligned_cols=108 Identities=31% Similarity=0.520 Sum_probs=104.0
Q ss_pred HHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCChHHHHHhCChHH
Q 031619 39 RDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIE 118 (156)
Q Consensus 39 ~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~tpL~~a~~~~~~~ 118 (156)
+.|+.|+..|+.++|+.|++. |++++.++..|+||||+|+..++.+++++|+..|++++.+|..|.||||+|+..|+.+
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~-Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~ 84 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIEN-GADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKE 84 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHH
Confidence 568999999999999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcccCchHHhhhhcccccCCCchhhhhhhh
Q 031619 119 IVQLLINSASGTECVKRMLETVDAEGDTDCDDQNDL 154 (156)
Q Consensus 119 ~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~~ 154 (156)
++++|+++|++++ .+|.+|+||||+|++.
T Consensus 85 ~v~~Ll~~gadvn-------~~d~~G~TpLh~A~~~ 113 (169)
T 4gpm_A 85 VVKLLISKGADVN-------AKDSDGRTPLHHAAEN 113 (169)
T ss_dssp HHHHHHHTTCCTT-------CCCTTSCCHHHHHHHT
T ss_pred HHHHHHHCcCCCC-------CCCCCCCCHHHHHHHc
Confidence 9999999999984 9999999999999863
No 11
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.95 E-value=7.1e-27 Score=153.19 Aligned_cols=131 Identities=21% Similarity=0.276 Sum_probs=117.1
Q ss_pred hHHHhHHHHhc-CCccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHH
Q 031619 14 SEEDNALFEED-GVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLE 92 (156)
Q Consensus 14 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~ 92 (156)
....++.+++. +.++ +..+..+.||||.|+..++.+++++|++. |++++.++..|.||||+|+..++.+++++|++
T Consensus 17 ~~~~v~~ll~~~~~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 93 (179)
T 3f6q_A 17 NAVAVRLWLDNTENDL--NQGDDHGFSPLHWACREGRSAVVEMLIMR-GARINVMNRGDDTPLHLAASHGHRDIVQKLLQ 93 (179)
T ss_dssp CHHHHHHHHHCTTSCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHhcCcccc--cccCCCCCCHHHHHHHcCcHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 34455555555 4444 44456788999999999999999999999 99999999999999999999999999999999
Q ss_pred cCCCCCccCCCCCChHHHHHhCChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhhh
Q 031619 93 RGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQNDL 154 (156)
Q Consensus 93 ~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~~ 154 (156)
.|++++.+|..|.||||+|+..++.+++++|+++|++++ .+|..|.|||++|++.
T Consensus 94 ~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-------~~~~~g~tpl~~A~~~ 148 (179)
T 3f6q_A 94 YKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVS-------ICNKYGEMPVDKAKAP 148 (179)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSS-------BCCTTSCCGGGGSCHH
T ss_pred cCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcc-------hhccCCCCcHHHHHHH
Confidence 999999999999999999999999999999999999984 8999999999999753
No 12
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.95 E-value=3.3e-27 Score=146.05 Aligned_cols=111 Identities=22% Similarity=0.369 Sum_probs=104.8
Q ss_pred CchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCChHHHHHhC
Q 031619 35 PPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAG 114 (156)
Q Consensus 35 ~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~tpL~~a~~~ 114 (156)
..+.++||.|+..|+.+++++|++. |.+++.++..|+||||+|+..++.+++++|++.|++++.+|..|.||||+|+..
T Consensus 5 ~~~~~~l~~A~~~~~~~~v~~ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~ 83 (123)
T 3aaa_C 5 SMCDKEFMWALKNGDLDEVKDYVAK-GEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYE 83 (123)
T ss_dssp --CHHHHHHHHHTTCHHHHHHHHHT-TCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHH
T ss_pred cccchHHHHHHHcCCHHHHHHHHHc-CCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc
Confidence 4667999999999999999999998 899999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhh
Q 031619 115 GFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQND 153 (156)
Q Consensus 115 ~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~ 153 (156)
++.+++++|+++|++++ .+|.+|.||||+|..
T Consensus 84 ~~~~~v~~Ll~~ga~~~-------~~~~~g~t~l~~A~~ 115 (123)
T 3aaa_C 84 GHVSCVKLLLSKGADKT-------VKGPDGLTAFEATDN 115 (123)
T ss_dssp TCHHHHHHHHHTTCCTT-------CCCTTSCCHHHHCCC
T ss_pred CCHHHHHHHHHcCCCCC-------CcCCCCCCHHHHhCC
Confidence 99999999999999984 899999999999854
No 13
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.95 E-value=2.3e-27 Score=149.29 Aligned_cols=113 Identities=29% Similarity=0.380 Sum_probs=107.5
Q ss_pred CCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCChHHHHH
Q 031619 33 ETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDAC 112 (156)
Q Consensus 33 ~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~tpL~~a~ 112 (156)
.+..+.||||.|+..|+.+++++|++. |++++.++..|.||||+|+..++.+++++|++.|++++.+|..|.||||+|+
T Consensus 6 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~ 84 (137)
T 3c5r_A 6 TNHRGETLLHIASIKGDIPSVEYLLQN-GSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAA 84 (137)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHH
Confidence 345788999999999999999999998 9999999999999999999999999999999999999999999999999999
Q ss_pred hCChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhh
Q 031619 113 AGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQND 153 (156)
Q Consensus 113 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~ 153 (156)
..++.+++++|+++|++++ .+|..|.||+++|++
T Consensus 85 ~~~~~~~v~~Ll~~ga~~~-------~~~~~g~tpl~~A~~ 118 (137)
T 3c5r_A 85 KNGHVDIVKLLLSYGASRN-------AVNIFGLRPVDYTDD 118 (137)
T ss_dssp HTTCHHHHHHHHHTTCCTT-------CCCTTSCCGGGGCCC
T ss_pred HcCCHHHHHHHHHcCCCCC-------CCCCCCCCHHHHHhh
Confidence 9999999999999999984 999999999999965
No 14
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.95 E-value=1.1e-27 Score=150.73 Aligned_cols=117 Identities=23% Similarity=0.309 Sum_probs=108.9
Q ss_pred CCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCccCCC-CCCh
Q 031619 29 DLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLERGASLEAKDED-GAIP 107 (156)
Q Consensus 29 ~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~-g~tp 107 (156)
+.+..+..+.+|||.|+..++.+++++|++. |++++.++..|+||||+|+. ++.+++++|++.|++++.+|.. |.||
T Consensus 4 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~ 81 (136)
T 1d9s_A 4 GIHMLGGSSDAGLATAAARGQVETVRQLLEA-GADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRP 81 (136)
T ss_dssp CCSCCCCCCSCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCH
T ss_pred CccCCCCCCccHHHHHHHcCCHHHHHHHHHc-CCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCH
Confidence 3444556788999999999999999999999 99999999999999999999 9999999999999999999999 9999
Q ss_pred HHHHHhCChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhhh
Q 031619 108 LHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQNDL 154 (156)
Q Consensus 108 L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~~ 154 (156)
||+|+..++.+++++|+++|++++ .+|..|.||||+|++.
T Consensus 82 L~~A~~~~~~~~v~~Ll~~ga~~~-------~~d~~g~tpl~~A~~~ 121 (136)
T 1d9s_A 82 VHDAAREGFLDTLVVLHRAGARLD-------VCDAWGRLPVDLAEEQ 121 (136)
T ss_dssp HHHHHHHTCHHHHHHHHHTCCCCC-------CCSSSSSCHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCC-------ccCCCCCCHHHHHHHc
Confidence 999999999999999999999984 8999999999999863
No 15
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.95 E-value=6.3e-27 Score=147.17 Aligned_cols=114 Identities=29% Similarity=0.351 Sum_probs=107.2
Q ss_pred CCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCChHHHHH
Q 031619 33 ETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDAC 112 (156)
Q Consensus 33 ~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~tpL~~a~ 112 (156)
....+.++||+|+..|+.+++++|++. |++++.++..|.||||+|+..++.+++++|++.|++++.+|..|.||||+|+
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~ 88 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMAN-GADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAA 88 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHH
Confidence 455778999999999999999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred hCChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhhh
Q 031619 113 AGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQNDL 154 (156)
Q Consensus 113 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~~ 154 (156)
..++.+++++|+++|++++ .+|.+|.||||+|++.
T Consensus 89 ~~~~~~~v~~Ll~~g~~~~-------~~~~~g~tpl~~A~~~ 123 (136)
T 2jab_A 89 FIGHLEIAEVLLKHGADVN-------AQDKFGKTAFDISIGN 123 (136)
T ss_dssp HHTCHHHHHHHHHTTCCTT-------CCCTTSCCHHHHHHHT
T ss_pred HcCCHHHHHHHHHcCCCCc-------CcCCCCCCHHHHHHHC
Confidence 9999999999999999984 8999999999999863
No 16
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.95 E-value=3e-27 Score=164.48 Aligned_cols=132 Identities=25% Similarity=0.379 Sum_probs=114.0
Q ss_pred ChHHHhHHHHhcCCccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHH
Q 031619 13 DSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLE 92 (156)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~ 92 (156)
.....++++++.|.++|.. +..|.||||+|+..|+.+++++|++. +++++.++..|.||+++|+..++.+++++|++
T Consensus 64 ~~~~~v~~Ll~~Gadvn~~--d~~G~TpLh~A~~~g~~~~v~~Ll~~-~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~ 140 (269)
T 4b93_B 64 PAQKRLAKVPASGLGVNVT--SQDGSSPLHVAALHGRADLIPLLLKH-GANAGARNADQAVPLHLACQQGHFQVVKCLLD 140 (269)
T ss_dssp -----------CCCCTTCC--CTTSCCHHHHHHHTTCTTHHHHHHHT-TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHH
T ss_pred CHHHHHHHHHHCCCCCCCc--CCCCCCHHHHHHHcCcHHHHHHHHhc-CCCcCccCCCCCCccccccccChHHHHHHHHH
Confidence 3445778888999887755 45788999999999999999999998 99999999999999999999999999999999
Q ss_pred cCCCCCccCCCCCChHHHHHhCChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhhh
Q 031619 93 RGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQNDL 154 (156)
Q Consensus 93 ~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~~ 154 (156)
.|++++.+|..|.||||+|+..|+.+++++|+++|++++ .++..|.||||+|++.
T Consensus 141 ~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn-------~~~~~g~t~Lh~A~~~ 195 (269)
T 4b93_B 141 SNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASIN-------ASNNKGNTALHEAVIE 195 (269)
T ss_dssp TTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTT-------CBCTTSCBHHHHHHHT
T ss_pred CCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCC-------ccccCCCcHHHHHHHc
Confidence 999999999999999999999999999999999999984 9999999999999863
No 17
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.95 E-value=1.3e-26 Score=148.56 Aligned_cols=130 Identities=20% Similarity=0.235 Sum_probs=115.1
Q ss_pred hHHHhHHHHhcCCccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHHc
Q 031619 14 SEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLER 93 (156)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~ 93 (156)
..+.++.+++. ...+.+..+..+.||||+ +..|+.+++++|++. |++++.++..|.||||+|+..++.+++++|++.
T Consensus 14 ~~~~v~~ll~~-~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 90 (156)
T 1bd8_A 14 DVQEVRRLLHR-ELVHPDALNRFGKTALQV-MMFGSTAIALELLKQ-GASPNVQDTSGTSPVHDAARTGFLDTLKVLVEH 90 (156)
T ss_dssp CHHHHHHHHHT-TCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CHHHHHHHHHh-hCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHc
Confidence 34555666655 433444556678899999 999999999999998 999999999999999999999999999999999
Q ss_pred CCCCCccCCCCCChHHHHHhCChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhhh
Q 031619 94 GASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQNDL 154 (156)
Q Consensus 94 ~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~~ 154 (156)
|++++.+|..|.||||+|+..|+.+++++|+++ +++ +.+|.+|.||||+|++.
T Consensus 91 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~-------~~~~~~g~t~l~~A~~~ 143 (156)
T 1bd8_A 91 GADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDL-------HRRDARGLTPLELALQR 143 (156)
T ss_dssp TCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCT-------TCCCTTSCCHHHHHHHS
T ss_pred CCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCC-------CCcCCCCCCHHHHHHHc
Confidence 999999999999999999999999999999999 887 48999999999999863
No 18
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.94 E-value=1.9e-26 Score=155.96 Aligned_cols=132 Identities=21% Similarity=0.205 Sum_probs=92.3
Q ss_pred hHHHhHHHHhcCCccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHHc
Q 031619 14 SEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLER 93 (156)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~ 93 (156)
..++++++++.|...+....+..+.+|||.|+..++.+++++|++. |++++.++..|.||||+|+..++.+++++|++.
T Consensus 84 ~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 162 (228)
T 2dzn_A 84 NLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIEN-GASVRIKDKFNQIPLHRAASVGSLKLIELLCGL 162 (228)
T ss_dssp CHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTT
T ss_pred CHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHc-CCCccccCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 3446666666664444444455666777777777777777777776 777777777777777777777777777777777
Q ss_pred C-CCCCccCCCCCChHHHHHhCChHHHHHHHH-HcccCchHHhhhhcccccCCCchhhhhhh
Q 031619 94 G-ASLEAKDEDGAIPLHDACAGGFIEIVQLLI-NSASGTECVKRMLETVDAEGDTDCDDQND 153 (156)
Q Consensus 94 ~-~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll-~~~~~~~~~~~~~~~~~~~g~tpl~~a~~ 153 (156)
| ++++.+|..|.||||+|+..++.+++++|+ ++|++++ .+|.+|.||+++|++
T Consensus 163 g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~-------~~~~~g~t~l~~A~~ 217 (228)
T 2dzn_A 163 GKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYD-------LVDNKGAKAEDVALN 217 (228)
T ss_dssp TCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSC-------CBCTTSCBGGGGCSS
T ss_pred CcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCC-------ccCCCCCcHHHHHHH
Confidence 7 677777777777777777777777777777 6677763 677777777777753
No 19
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.94 E-value=9.1e-27 Score=160.67 Aligned_cols=142 Identities=14% Similarity=0.097 Sum_probs=121.0
Q ss_pred CChHHHhHHHHhcCCc---------cCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccC--------------
Q 031619 12 DDSEEDNALFEEDGVN---------MDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPV-------------- 68 (156)
Q Consensus 12 ~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~-------------- 68 (156)
.+..++++++++.|.+ .+....+..+.||||+|+..|+.+++++|++. |++++.++
T Consensus 59 ~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~~~~~~~~~~~~~ 137 (260)
T 3jxi_A 59 AGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEK-GADVHAQARGRFFQPKDEGGYF 137 (260)
T ss_dssp TTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCEECCCSSSCCCCSC
T ss_pred cCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhC-CCCcCccccccccCcccccccc
Confidence 4556677888887643 33444555889999999999999999999998 99999988
Q ss_pred CCCCcHHHHHHhcCCHHHHHHHHH---cCCCCCccCCCCCChHHHHHhCCh---------HHHHHHHHHcccCchHHhhh
Q 031619 69 EDGDTALHLTCLYGYLPCVQLLLE---RGASLEAKDEDGAIPLHDACAGGF---------IEIVQLLINSASGTECVKRM 136 (156)
Q Consensus 69 ~~g~t~l~~a~~~~~~~~~~~ll~---~~~~~~~~~~~g~tpL~~a~~~~~---------~~~~~~Ll~~~~~~~~~~~~ 136 (156)
..|.||||+|+..++.+++++|++ .|++++.+|..|.||||+|+..++ .+++++|+++|+++......
T Consensus 138 ~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~ 217 (260)
T 3jxi_A 138 YFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNL 217 (260)
T ss_dssp CSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCG
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccch
Confidence 689999999999999999999999 999999999999999999998776 69999999999998322222
Q ss_pred hcccccCCCchhhhhhhh
Q 031619 137 LETVDAEGDTDCDDQNDL 154 (156)
Q Consensus 137 ~~~~~~~g~tpl~~a~~~ 154 (156)
.+.+|..|+||||+|++.
T Consensus 218 ~~~~d~~g~tpL~~A~~~ 235 (260)
T 3jxi_A 218 EALLNNDGLSPLMMAAKT 235 (260)
T ss_dssp GGCCCTTSCCHHHHHHHT
T ss_pred hhcccCCCCCHHHHHHHc
Confidence 247999999999999863
No 20
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.94 E-value=3.4e-26 Score=155.68 Aligned_cols=125 Identities=22% Similarity=0.230 Sum_probs=106.8
Q ss_pred HHHHhcCCccCC-CCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCC
Q 031619 19 ALFEEDGVNMDL-ESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLERGASL 97 (156)
Q Consensus 19 ~~~~~~~~~~~~-~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~ 97 (156)
+.++++|.+.+. ......+.++||.|+..|+.+++++|++. |++++.++..|.||||+|+..++.+++++|++.|+++
T Consensus 2 ~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~ 80 (229)
T 2vge_A 2 RSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKE-MNDPSQPNEEGITALHNAICGANYSIVDFLITAGANV 80 (229)
T ss_dssp --------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHH-SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred eehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 456666776653 33455778999999999999999999998 8999999999999999999999999999999999999
Q ss_pred CccCCCCCChHHHHHhCChHHHHHHHHHcccCchHHhhhhcccc-cCCCchhhhh
Q 031619 98 EAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVD-AEGDTDCDDQ 151 (156)
Q Consensus 98 ~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~-~~g~tpl~~a 151 (156)
+.+|..|.||||+|+..|+.+++++|+++|++++ .++ .+|.||||+|
T Consensus 81 n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~-------~~~~~~g~tpL~~A 128 (229)
T 2vge_A 81 NSPDSHGWTPLHCAASCNDTVICMALVQHGAAIF-------ATTLSDGATAFEKC 128 (229)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTT-------CCCSSTTCCTGGGC
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-------cccCCCCCCHHHHH
Confidence 9999999999999999999999999999999985 665 6999999998
No 21
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.94 E-value=1.2e-26 Score=158.65 Aligned_cols=129 Identities=21% Similarity=0.289 Sum_probs=103.0
Q ss_pred CChHHHhHHHHhcCCccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHH
Q 031619 12 DDSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLL 91 (156)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll 91 (156)
....+.++.++++|.+++. ++.+.|+||.|+..|+.+++++|++. |++++.++..|.||||+|+..|+.+++++|+
T Consensus 15 ~~~~~~~~~ll~~g~~~~~---~~~~~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll 90 (239)
T 1ycs_B 15 TNLRKTGSERIAHGMRVKF---NPLPLALLLDSSLEGEFDLVQRIIYE-VDDPSLPNDEGITALHNAVCAGHTEIVKFLV 90 (239)
T ss_dssp -------------------------CHHHHHHHHHHTCHHHHHHHTST-TSSCCCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred hhhHHHHHHHhccCCCccc---CchhhHHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 3556677888899998876 46789999999999999999999998 8999999999999999999999999999999
Q ss_pred HcCCCCCccCCCCCChHHHHHhCChHHHHHHHHHcccCchHHhhhhcccccCCC-chhhhh
Q 031619 92 ERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGD-TDCDDQ 151 (156)
Q Consensus 92 ~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~-tpl~~a 151 (156)
+.|++++.+|..|.||||+|+..|+.+++++|+++|++++ .++..|. ||||+|
T Consensus 91 ~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~-------~~~~~~~~t~l~~a 144 (239)
T 1ycs_B 91 QFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVF-------AMTYSDMQTAADKC 144 (239)
T ss_dssp HHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-------CCCSSSCCCHHHHC
T ss_pred HcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-------eecCCCCcchHHHH
Confidence 9999999999999999999999999999999999999985 7887777 999998
No 22
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.94 E-value=1.4e-26 Score=159.45 Aligned_cols=141 Identities=18% Similarity=0.117 Sum_probs=120.0
Q ss_pred ChHHHhHHHHhcCCccCC---------CCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCC-------------
Q 031619 13 DSEEDNALFEEDGVNMDL---------ESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVED------------- 70 (156)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~------------- 70 (156)
+..++++++++.|.+.+. .+.+..+.||||+|+..|+.+++++|++. |++++.++..
T Consensus 57 g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~~~~~~~~~~~~~~ 135 (256)
T 2etb_A 57 GVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVEN-GADVHLRACGRFFQKHQGTCFYF 135 (256)
T ss_dssp TBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCCSGGGSCCSSSCCCS
T ss_pred chHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHc-CCCCCcccccccccccccccccC
Confidence 455677888888776542 22345788999999999999999999999 9999998876
Q ss_pred CCcHHHHHHhcCCHHHHHHHHH---cCCCCCccCCCCCChHHHHHh--CChHH-------HHHHHHHcccCchHHhhhhc
Q 031619 71 GDTALHLTCLYGYLPCVQLLLE---RGASLEAKDEDGAIPLHDACA--GGFIE-------IVQLLINSASGTECVKRMLE 138 (156)
Q Consensus 71 g~t~l~~a~~~~~~~~~~~ll~---~~~~~~~~~~~g~tpL~~a~~--~~~~~-------~~~~Ll~~~~~~~~~~~~~~ 138 (156)
|.||||+|+..++.+++++|++ .|++++.+|..|.||||+|+. .++.+ ++++|+++|+++.......+
T Consensus 136 g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~ 215 (256)
T 2etb_A 136 GELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEE 215 (256)
T ss_dssp CSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGG
T ss_pred CCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCccccccccc
Confidence 9999999999999999999999 999999999999999999998 77888 99999999999821111114
Q ss_pred ccccCCCchhhhhhhh
Q 031619 139 TVDAEGDTDCDDQNDL 154 (156)
Q Consensus 139 ~~~~~g~tpl~~a~~~ 154 (156)
.+|..|+||||+|++.
T Consensus 216 ~~d~~g~tpL~~A~~~ 231 (256)
T 2etb_A 216 ISNHQGLTPLKLAAKE 231 (256)
T ss_dssp CCCTTSCCHHHHHHHT
T ss_pred ccCCCCCCHHHHHHHh
Confidence 8999999999999863
No 23
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.94 E-value=8.6e-26 Score=150.16 Aligned_cols=131 Identities=22% Similarity=0.270 Sum_probs=87.4
Q ss_pred hHHHhHHHHhcCCccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHHc
Q 031619 14 SEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLER 93 (156)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~ 93 (156)
..++++++++.|.+++.. +..+.+|||+|+..++.+++++|++..+.+++..+..|.||||+|+..++.+++++|++.
T Consensus 51 ~~~~v~~Ll~~g~~~~~~--~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 128 (201)
T 3hra_A 51 DIEIAKALIDRGADINLQ--NSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLED 128 (201)
T ss_dssp CHHHHHHHHHTTCCTTCC--CTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCCCCC--CCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHc
Confidence 345666666666655433 335556677777777777777776554666666666677777777777777777777776
Q ss_pred C-CCCCccCCCCCChHHHHHhCCh-----HHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhh
Q 031619 94 G-ASLEAKDEDGAIPLHDACAGGF-----IEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQND 153 (156)
Q Consensus 94 ~-~~~~~~~~~g~tpL~~a~~~~~-----~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~ 153 (156)
| ++++.+|..|.||||+|+..+. .+++++|+++|++++ .+|..|.||||+|++
T Consensus 129 g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~-------~~~~~g~t~l~~A~~ 187 (201)
T 3hra_A 129 GREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQS-------IKDNSGRTAMDYANQ 187 (201)
T ss_dssp CCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTT-------CCCTTSCCHHHHHHH
T ss_pred CCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCC-------ccCCCCCCHHHHHHH
Confidence 6 6677777777777777776665 677777777777763 667777777777754
No 24
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.94 E-value=1.8e-26 Score=160.30 Aligned_cols=141 Identities=16% Similarity=0.156 Sum_probs=120.3
Q ss_pred ChHHHhHHHHhcCCc---------cCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCC--------------
Q 031619 13 DSEEDNALFEEDGVN---------MDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVE-------------- 69 (156)
Q Consensus 13 ~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~-------------- 69 (156)
+..++++++++.|.+ ......+..+.||||+|+..|+.+++++|++. |++++.++.
T Consensus 68 g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~~~~~~~~~~~~~~ 146 (273)
T 2pnn_A 68 GQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVEN-GADVQAAANGDFFKKTKGRPGFY 146 (273)
T ss_dssp TBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCBCSGGGSSCSSSCCCC
T ss_pred CChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHC-CCCcCcccccccccccccccccc
Confidence 556778888887754 22233455788999999999999999999999 999999886
Q ss_pred CCCcHHHHHHhcCCHHHHHHHHH---cCCCCCccCCCCCChHHHHHhCCh---------HHHHHHHHHcccCchHHhhhh
Q 031619 70 DGDTALHLTCLYGYLPCVQLLLE---RGASLEAKDEDGAIPLHDACAGGF---------IEIVQLLINSASGTECVKRML 137 (156)
Q Consensus 70 ~g~t~l~~a~~~~~~~~~~~ll~---~~~~~~~~~~~g~tpL~~a~~~~~---------~~~~~~Ll~~~~~~~~~~~~~ 137 (156)
.|.||||+|+..++.+++++|++ .|++++.+|..|.||||+|+..++ .+++++|+++|++++......
T Consensus 147 ~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~ 226 (273)
T 2pnn_A 147 FGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLE 226 (273)
T ss_dssp SCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGG
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccc
Confidence 79999999999999999999999 999999999999999999999887 799999999999984222222
Q ss_pred cccccCCCchhhhhhhh
Q 031619 138 ETVDAEGDTDCDDQNDL 154 (156)
Q Consensus 138 ~~~~~~g~tpl~~a~~~ 154 (156)
+.+|..|.||||+|++.
T Consensus 227 ~~~d~~g~TpL~~A~~~ 243 (273)
T 2pnn_A 227 EITNRKGLTPLALAASS 243 (273)
T ss_dssp GCCCTTSCCHHHHHHHT
T ss_pred cccCCCCCCHHHHHHHh
Confidence 36899999999999763
No 25
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.94 E-value=5.8e-26 Score=153.59 Aligned_cols=134 Identities=23% Similarity=0.319 Sum_probs=116.8
Q ss_pred ChHHHhHHHHhcCCccCCCC-CCCchHHHHHHHHhcCCHHHHHHHHHhCC--CCCCccCCCCCcHHHHHHhcCCHHHHHH
Q 031619 13 DSEEDNALFEEDGVNMDLES-ETPPHLRDLAAAAQLGDVHSLRLALDNLS--GSIDEPVEDGDTALHLTCLYGYLPCVQL 89 (156)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~a~~~~~~~~v~~ll~~~~--~~~~~~~~~g~t~l~~a~~~~~~~~~~~ 89 (156)
+..++++++++.|.+.+... .+..+.||||.|+..|+.+++++|++. | .+++.++..|.||||+|+..++.+++++
T Consensus 47 ~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ 125 (228)
T 2dzn_A 47 QAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDR-PLKPDLNKITNQGVTCLHLAVGKKWFEVSQF 125 (228)
T ss_dssp TCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSS-SSCCCTTCCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred CCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhC-CCCcccccCCcCCCCHHHHHHHcCCHhHHHH
Confidence 45667888888886666555 566788999999999999999999988 6 8888888999999999999999999999
Q ss_pred HHHcCCCCCccCCCCCChHHHHHhCChHHHHHHHHHcc-cCchHHhhhhcccccCCCchhhhhhhh
Q 031619 90 LLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSA-SGTECVKRMLETVDAEGDTDCDDQNDL 154 (156)
Q Consensus 90 ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~~-~~~~~~~~~~~~~~~~g~tpl~~a~~~ 154 (156)
|++.|++++.++..|.||||+|+..|+.+++++|+++| +++ +.+|..|+||||+|++.
T Consensus 126 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------~~~d~~g~t~L~~A~~~ 184 (228)
T 2dzn_A 126 LIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAV-------NWQDKQGWTPLFHALAE 184 (228)
T ss_dssp HHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCS-------CCCCTTSCCHHHHHHHT
T ss_pred HHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccc-------cCcCCCCCCHHHHHHHc
Confidence 99999999999999999999999999999999999998 777 48899999999999763
No 26
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.94 E-value=7.3e-26 Score=153.65 Aligned_cols=131 Identities=24% Similarity=0.268 Sum_probs=115.0
Q ss_pred ChHHHhHHHHhc-CCccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCC-----CccCCCCCcHHHHHHhcCCHHH
Q 031619 13 DSEEDNALFEED-GVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSI-----DEPVEDGDTALHLTCLYGYLPC 86 (156)
Q Consensus 13 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~-----~~~~~~g~t~l~~a~~~~~~~~ 86 (156)
+..+.++.+++. |.+++.. +..+.||||+|+..|+.+++++|++. ++++ +.++..|.||||+|+..++.++
T Consensus 14 g~~~~v~~Ll~~~g~~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~ 90 (232)
T 2rfa_A 14 NDVQALSKLLKFEGCEVHQR--GAMGETALHIAALYDNLEAAMVLMEA-APELVFEPMTSELYEGQTALHIAVINQNVNL 90 (232)
T ss_dssp TCHHHHHHHHTTTCSCTTCC--CTTSCCHHHHHHHTTCHHHHHHHHHH-CGGGGGCCCCSTTTTTCCHHHHHHHTTCHHH
T ss_pred CCHHHHHHHHHhcCCCcccC--CCCCCCHHHHHHHcCCHHHHHHHHHc-CchhccccccccCCCCcCHHHHHHHcCCHHH
Confidence 345566666665 7766544 55788999999999999999999998 7765 5667899999999999999999
Q ss_pred HHHHHHcCCCCCccCC-------------CCCChHHHHHhCChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhh
Q 031619 87 VQLLLERGASLEAKDE-------------DGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQND 153 (156)
Q Consensus 87 ~~~ll~~~~~~~~~~~-------------~g~tpL~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~ 153 (156)
+++|++.|++++..+. .|.||||+|+..|+.+++++|+++|++++ .+|..|+||||+|+.
T Consensus 91 v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-------~~d~~g~t~L~~A~~ 163 (232)
T 2rfa_A 91 VRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIR-------AQDSLGNTVLHILIL 163 (232)
T ss_dssp HHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTT-------CCCTTSCCHHHHHHT
T ss_pred HHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-------CCCCCCCCHHHHHHH
Confidence 9999999999988765 79999999999999999999999999984 899999999999985
No 27
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.94 E-value=1.2e-25 Score=152.36 Aligned_cols=128 Identities=22% Similarity=0.226 Sum_probs=83.7
Q ss_pred HHHhHHHHhcCCccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHHcC
Q 031619 15 EEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLERG 94 (156)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~ 94 (156)
.++++++++.|.+++.. +..+.||||.|+..++.+++++|++. |++++.++..|.||||+|+..++.+++++|++.|
T Consensus 86 ~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 162 (231)
T 3aji_A 86 DEIVKALLVKGAHVNAV--NQNGCTPLHYAASKNRHEIAVMLLEG-GANPDAKDHYDATAMHRAAAKGNLKMVHILLFYK 162 (231)
T ss_dssp HHHHHHHHHTTCCTTCC--CTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCCCCC--CCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcC
Confidence 34555666666554432 33455666666666666666666666 6666666666666666666666666777666666
Q ss_pred CCCCccCCCCCChHHHHHhCChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhh
Q 031619 95 ASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQN 152 (156)
Q Consensus 95 ~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~ 152 (156)
++++.+|..|.||||+|+..++.+++++|+++|++++ .+|..|.||+++|+
T Consensus 163 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-------~~~~~g~t~l~~A~ 213 (231)
T 3aji_A 163 ASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIY-------IENKEEKTPLQVAK 213 (231)
T ss_dssp CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSC-------CCCTTSCCHHHHSC
T ss_pred CCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCC-------CCCCCCCCHHHHHH
Confidence 6666666667777777777777777777777766663 66677777777664
No 28
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.94 E-value=8.4e-26 Score=148.71 Aligned_cols=111 Identities=29% Similarity=0.338 Sum_probs=105.5
Q ss_pred CchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCccC-CCCCChHHHHHh
Q 031619 35 PPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLERGASLEAKD-EDGAIPLHDACA 113 (156)
Q Consensus 35 ~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~-~~g~tpL~~a~~ 113 (156)
..+.||||.|+..|+.++++.|++ +.+++.++..|+||||+|+..++.+++++|++.|++++.++ ..|.||||+|+.
T Consensus 42 ~~g~t~L~~A~~~g~~~~v~~Ll~--~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~ 119 (183)
T 3deo_A 42 SEYETPWWTAARKADEQALSQLLE--DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 119 (183)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHTT--TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHh--cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHh
Confidence 467899999999999999999998 78999999999999999999999999999999999999988 889999999999
Q ss_pred CChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhhh
Q 031619 114 GGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQNDL 154 (156)
Q Consensus 114 ~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~~ 154 (156)
.|+.+++++|+++|++++ .+|.+|+||||+|++.
T Consensus 120 ~~~~~~v~~Ll~~ga~~~-------~~d~~g~tpl~~A~~~ 153 (183)
T 3deo_A 120 YVRPEVVEALVELGADIE-------VEDERGLTALELAREI 153 (183)
T ss_dssp TTCHHHHHHHHHHTCCTT-------CCCTTSCCHHHHHHHH
T ss_pred cCcHHHHHHHHHcCCCCc-------CCCCCCCCHHHHHHHh
Confidence 999999999999999984 8999999999999875
No 29
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.94 E-value=7.9e-26 Score=155.66 Aligned_cols=128 Identities=17% Similarity=0.222 Sum_probs=80.4
Q ss_pred HHhHHHHhcCC-ccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHHcC
Q 031619 16 EDNALFEEDGV-NMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLERG 94 (156)
Q Consensus 16 ~~~~~~~~~~~-~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~ 94 (156)
++++++++.+. +++ ..+..+.||||+|+..++.+++++|++. |++++.++..|.||||+|+..++.+++++|++.|
T Consensus 104 ~~v~~Ll~~~~~~~~--~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g 180 (253)
T 1yyh_A 104 GVFQILIRNRATDLD--ARMHDGTTPLILAARLAVEGMLEDLINS-HADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNG 180 (253)
T ss_dssp HHHHHHHHSTTSCTT--CCCTTCCCHHHHHHHHTCSSHHHHHHHT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCCcc--ccCCCCCcHHHHHHHcChHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 34444554443 222 2233455666666666666666666665 6666666666666666666666666666666666
Q ss_pred CCCCccCCCCCChHHHHHhCChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhh
Q 031619 95 ASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQND 153 (156)
Q Consensus 95 ~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~ 153 (156)
++++.+|..|.||||+|+..++.+++++|+++|++++ .+|..|.||+++|++
T Consensus 181 a~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~-------~~d~~g~tpl~~A~~ 232 (253)
T 1yyh_A 181 ANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD-------ITDHMDRLPRDIAQE 232 (253)
T ss_dssp CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-------CCCTTCCCHHHHHHH
T ss_pred CCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcc-------ccccCCCCHHHHHHH
Confidence 6666666666667776666666666666666666663 666667777776654
No 30
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.94 E-value=2.3e-25 Score=151.23 Aligned_cols=140 Identities=22% Similarity=0.218 Sum_probs=120.1
Q ss_pred ChHHHhHHHHhcCCccCC---CCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCC-------------CCCcHHH
Q 031619 13 DSEEDNALFEEDGVNMDL---ESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVE-------------DGDTALH 76 (156)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~-------------~g~t~l~ 76 (156)
+..++++++++.|.+... ...+..+.||||+|+..|+.+++++|++. |++++.++. .|.||||
T Consensus 48 g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~~~~~~~~~~~~~~g~t~L~ 126 (232)
T 2rfa_A 48 DNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLAR-GASVSARATGSVFHYRPHNLIYYGEHPLS 126 (232)
T ss_dssp TCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCCSGGGSCCTTCSCCCCSSHHH
T ss_pred CCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhC-CCCCCcccCCcceeecccccccCCCCHHH
Confidence 456788889988877532 33455788999999999999999999998 899988765 7999999
Q ss_pred HHHhcCCHHHHHHHHHcCCCCCccCCCCCChHHHHHhCChHHHH----HHHHHcccCchHHhhhhcccccCCCchhhhhh
Q 031619 77 LTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIV----QLLINSASGTECVKRMLETVDAEGDTDCDDQN 152 (156)
Q Consensus 77 ~a~~~~~~~~~~~ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~----~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~ 152 (156)
+|+..++.+++++|++.|++++.+|..|.||||+|+..++.+++ ++|+++|++.. .....+.+|..|.||||+|+
T Consensus 127 ~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~-~~~~~~~~~~~g~tpl~~A~ 205 (232)
T 2rfa_A 127 FAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDH-LKSLELVPNNQGLTPFKLAG 205 (232)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCS-SCCGGGCCCTTSCCHHHHHH
T ss_pred HHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchh-hhhhhccCCCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999888 99999999762 01112478999999999998
Q ss_pred hh
Q 031619 153 DL 154 (156)
Q Consensus 153 ~~ 154 (156)
+.
T Consensus 206 ~~ 207 (232)
T 2rfa_A 206 VE 207 (232)
T ss_dssp HH
T ss_pred Hc
Confidence 63
No 31
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.94 E-value=1.9e-25 Score=151.45 Aligned_cols=130 Identities=25% Similarity=0.293 Sum_probs=103.4
Q ss_pred hHHHhHHHHhcCCccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHHc
Q 031619 14 SEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLER 93 (156)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~ 93 (156)
..++++++++.|.+++.. +..+.||||.|+..++.+++++|++. |++++.++..|.||||+|+..++.+++++|++.
T Consensus 52 ~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~ 128 (231)
T 3aji_A 52 HTEIVEFLLQLGVPVNDK--DDAGWSPLHIAASAGXDEIVKALLVK-GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEG 128 (231)
T ss_dssp CHHHHHHHHHTTCCSCCC--CTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred cHHHHHHHHHhCCCCCCc--CCCCCCHHHHHHHcCHHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 445677777777665543 44667888888888888888888887 788888888888888888888888888888888
Q ss_pred CCCCCccCCCCCChHHHHHhCChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhh
Q 031619 94 GASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQND 153 (156)
Q Consensus 94 ~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~ 153 (156)
|++++.++..|.||||+|+..|+.+++++|+++|++++ .+|..|.||||+|++
T Consensus 129 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------~~~~~g~t~L~~A~~ 181 (231)
T 3aji_A 129 GANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTN-------IQDTEGNTPLHLACD 181 (231)
T ss_dssp TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSC-------CCCTTSCCHHHHHHH
T ss_pred CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcc-------ccCCCCCCHHHHHHH
Confidence 88888888888888888888888888888888888874 788888888888875
No 32
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.93 E-value=1.4e-25 Score=155.96 Aligned_cols=116 Identities=24% Similarity=0.264 Sum_probs=97.3
Q ss_pred CCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCC-CCCcHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCChH
Q 031619 30 LESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVE-DGDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPL 108 (156)
Q Consensus 30 ~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~-~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~tpL 108 (156)
.+..+..+.||||+|+..|+.+++++|++. |++++.++. .|.||||+|+..++.+++++|++.|++++.+|..|.|||
T Consensus 151 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL 229 (282)
T 1oy3_D 151 LEAENYDGHTPLHVAVIHKDAEMVRLLRDA-GADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPL 229 (282)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHH-TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CCCcCCCCcCHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHH
Confidence 344566788999999999999999999999 999999885 499999999999999999999999999999999999999
Q ss_pred HHHHhCChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhh
Q 031619 109 HDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQND 153 (156)
Q Consensus 109 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~ 153 (156)
|+|+..++.+++++|+++|++++ .+|..|.|||+.|..
T Consensus 230 ~~A~~~~~~~~v~~Ll~~ga~~~-------~~~~~g~tpl~~a~~ 267 (282)
T 1oy3_D 230 GSALLRPNPILARLLRAHGAPEP-------EDGGDKLSPCSSSGS 267 (282)
T ss_dssp HHHHTSSCHHHHHHHHHTTCCCC-------CCC------------
T ss_pred HHHHHcCCcHHHHHHHHcCCCcC-------cCCCcccccccccCC
Confidence 99999999999999999999984 999999999999864
No 33
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.93 E-value=9.8e-26 Score=155.20 Aligned_cols=131 Identities=17% Similarity=0.188 Sum_probs=89.2
Q ss_pred hHHHhHHHHhcCCccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHHc
Q 031619 14 SEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLER 93 (156)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~ 93 (156)
..++++++++.|.+++.. +..+.||||+|+..++.+++++|++..+.+++.++..|.||||+|+..++.+++++|++.
T Consensus 69 ~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 146 (253)
T 1yyh_A 69 RSDAAKRLLEASADANIQ--DNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINS 146 (253)
T ss_dssp CHHHHHHHHHTTCCTTCC--CTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHT
T ss_pred CHHHHHHHHHcCCCCCCC--CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHc
Confidence 344566666666655433 335566677777777777777766663336666666677777777777777777777777
Q ss_pred CCCCCccCCCCCChHHHHHhCChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhh
Q 031619 94 GASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQND 153 (156)
Q Consensus 94 ~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~ 153 (156)
|++++.+|..|.||||+|+..|+.+++++|+++|++++ .+|..|.||||+|++
T Consensus 147 g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-------~~~~~g~tpL~~A~~ 199 (253)
T 1yyh_A 147 HADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKD-------MQNNREETPLFLAAR 199 (253)
T ss_dssp TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTT-------CCCTTSCCHHHHHHH
T ss_pred CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-------CcCCCCCCHHHHHHH
Confidence 77777777777777777777777777777777777763 677777777777764
No 34
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.93 E-value=3.1e-25 Score=149.63 Aligned_cols=129 Identities=17% Similarity=0.192 Sum_probs=63.7
Q ss_pred HHHhHHHHhcCCccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHHcC
Q 031619 15 EEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLERG 94 (156)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~ 94 (156)
.+.++++++.|.+++.. +..+.+|||.|+..++.+++++|++..+.+++.++..|.||||+|+..++.+++++|++.|
T Consensus 38 ~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g 115 (223)
T 2f8y_A 38 SDAAKRLLEASADANIQ--DNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSH 115 (223)
T ss_dssp HHHHHHHHHTTCCTTCC--CTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCCCCc--CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcC
Confidence 33445555555443322 2344455555555555555555555422244444455555555555555555555555555
Q ss_pred CCCCccCCCCCChHHHHHhCChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhh
Q 031619 95 ASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQN 152 (156)
Q Consensus 95 ~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~ 152 (156)
++++..+..|.||||+|+..++.+++++|+++|++++ .+|..|.||||+|+
T Consensus 116 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------~~~~~g~t~L~~A~ 166 (223)
T 2f8y_A 116 ADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKD-------MQNNREETPLFLAA 166 (223)
T ss_dssp CCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTT-------CCCTTCCCHHHHHH
T ss_pred CCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC-------CcCCCCcCHHHHHH
Confidence 5555555555555555555555555555555555442 44445555555544
No 35
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.93 E-value=2e-25 Score=151.81 Aligned_cols=130 Identities=19% Similarity=0.258 Sum_probs=93.4
Q ss_pred hHHHhHHHHhcC-CccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHH
Q 031619 14 SEEDNALFEEDG-VNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLE 92 (156)
Q Consensus 14 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~ 92 (156)
..++++++++.+ .+++. .+..+.+|||.|+..++.+++++|++. |++++.++..|.||||+|+..++.+++++|++
T Consensus 89 ~~~~~~~Ll~~~~~~~~~--~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~ 165 (237)
T 3b7b_A 89 HYEVVQYLLSNGQMDVNC--QDDGGWTPMIWATEYKHVDLVKLLLSK-GSDINIRDNEENICLHWAAFSGCVDIAEILLA 165 (237)
T ss_dssp CHHHHHHHHTTTCCCTTC--CCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHT
T ss_pred CHHHHHHHHhCCCCCccc--CCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCccCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence 345566666655 33332 334566777777777777777777776 77777777777777777777777777777777
Q ss_pred cCCCCCccCCCCCChHHHHHhCChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhh
Q 031619 93 RGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQND 153 (156)
Q Consensus 93 ~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~ 153 (156)
.|++++.+|..|.||||+|+..++.+++++|+++|++++ .+|.+|.||||+|++
T Consensus 166 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~-------~~d~~g~t~l~~A~~ 219 (237)
T 3b7b_A 166 AKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVT-------LKNKEGETPLQCASL 219 (237)
T ss_dssp TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTT-------CCCTTSCCHHHHSCT
T ss_pred cCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCC-------ccCCCCCCHHHHHHH
Confidence 777777777777777777777777777777777777764 777777888777754
No 36
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.93 E-value=2.4e-26 Score=147.70 Aligned_cols=129 Identities=20% Similarity=0.236 Sum_probs=82.4
Q ss_pred hHHHhHHHHhcCCccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCc-HHHHHHhcCCHHHHHHHHH
Q 031619 14 SEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDT-ALHLTCLYGYLPCVQLLLE 92 (156)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t-~l~~a~~~~~~~~~~~ll~ 92 (156)
..+.++++++.|.+++.. +..+.||||+|+ .++.+++++|++. |++++.++..|.| |||+|+..++.+++++|++
T Consensus 24 ~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~-~~~~~~v~~Ll~~-g~~~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~ 99 (156)
T 1bi7_B 24 RVEEVRALLEAGANPNAP--NSYGRRPIQVMM-MGSARVAELLLLH-GAEPNCADPATLTRPVHDAAREGFLDTLVVLHR 99 (156)
T ss_dssp CHHHHHHHHTTTCCTTCC--CSSSCCTTTSSC-TTCHHHHHHHHTT-TCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCCCCC--CCCCCCHHHHHH-cCCHHHHHHHHHc-CCCCCCcCCCCCcHHHHHHHHCCCHHHHHHHHH
Confidence 445666777777665543 346667777764 7778888877777 7777777777777 8888888888888888888
Q ss_pred cCCCCCccCCCCCChHHHHHhCChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhh
Q 031619 93 RGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQND 153 (156)
Q Consensus 93 ~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~ 153 (156)
.|++++.+|..|.||||+|+..++.+++++|+++|++++ .++..|.||.+.+.+
T Consensus 100 ~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~-------~~~~~g~t~~~~~~~ 153 (156)
T 1bi7_B 100 AGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTR-------GSNHARIDAAEGPSD 153 (156)
T ss_dssp HTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC--------------------------
T ss_pred cCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCC-------ccCcCcCcccccCCC
Confidence 788888877778888888888888888888888887774 777777777765543
No 37
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.93 E-value=2.1e-25 Score=137.79 Aligned_cols=110 Identities=33% Similarity=0.501 Sum_probs=99.9
Q ss_pred hHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCChHHHHHhCCh
Q 031619 37 HLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGF 116 (156)
Q Consensus 37 ~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~tpL~~a~~~~~ 116 (156)
|.||||.|+..|+.+++++|++. |.+++..+..|.||||+|+..++.+++++|++.|++++.++..|.||||+|+..++
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~ 80 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLEA-GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHH-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CccHHHHHHHcCcHHHHHHHHHc-CCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCh
Confidence 55889999999999999999998 88899899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhhh
Q 031619 117 IEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQNDL 154 (156)
Q Consensus 117 ~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~~ 154 (156)
.+++++|+++|++++ .+|..|.|||++|++.
T Consensus 81 ~~~~~~Ll~~g~~~~-------~~~~~g~t~l~~A~~~ 111 (126)
T 1n0r_A 81 LEVVKLLLEAGADVN-------AKDKNGRTPLHLAARN 111 (126)
T ss_dssp HHHHHHHHHTTCCTT-------CCCTTSCCHHHHHHHT
T ss_pred HHHHHHHHHcCCCCc-------ccCCCCCCHHHHHHHc
Confidence 999999999999874 8899999999999753
No 38
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.93 E-value=1.9e-25 Score=155.22 Aligned_cols=130 Identities=19% Similarity=0.214 Sum_probs=99.5
Q ss_pred hHHHhHHHHhcCCccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCC------------------------------
Q 031619 14 SEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGS------------------------------ 63 (156)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~------------------------------ 63 (156)
..++++++++.|.+++.. +..+.||||+|+..++.+++++|++. +.+
T Consensus 57 ~~~~v~~Ll~~ga~~~~~--~~~g~tpL~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (282)
T 1oy3_D 57 EASTVEKLYAAGAGVLVA--ERGGHTALHLACRVRAHTCACVLLQP-RPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQ 133 (282)
T ss_dssp CHHHHHHHHHTTCCSSCC--CTTSCCHHHHHTTTTCHHHHHHHSSS-CCSSCCCC-------------------------
T ss_pred CHHHHHHHHHcCCCCCCC--CCCCCCHHHHHHHcCCcchhHhhhcc-CCCCchhhHHHHhhcccccCcchhcchhhhccc
Confidence 345667777777766543 34666777777777777777777765 332
Q ss_pred -----------------CCccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCccCCC-CCChHHHHHhCChHHHHHHHHH
Q 031619 64 -----------------IDEPVEDGDTALHLTCLYGYLPCVQLLLERGASLEAKDED-GAIPLHDACAGGFIEIVQLLIN 125 (156)
Q Consensus 64 -----------------~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~-g~tpL~~a~~~~~~~~~~~Ll~ 125 (156)
++.++..|.||||+|+..++.+++++|++.|++++..+.. |.||||+|+..|+.+++++|++
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~ 213 (282)
T 1oy3_D 134 PNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLK 213 (282)
T ss_dssp ----------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred cccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHH
Confidence 4556677888888888888888888888888888887754 8888888888888888888888
Q ss_pred cccCchHHhhhhcccccCCCchhhhhhh
Q 031619 126 SASGTECVKRMLETVDAEGDTDCDDQND 153 (156)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~g~tpl~~a~~ 153 (156)
+|++++ .+|..|+||||+|++
T Consensus 214 ~gad~~-------~~d~~g~tpL~~A~~ 234 (282)
T 1oy3_D 214 AGADPT-------ARMYGGRTPLGSALL 234 (282)
T ss_dssp TTCCTT-------CCCTTSCCHHHHHHT
T ss_pred cCCCCc-------ccccCCCCHHHHHHH
Confidence 888874 888888888888875
No 39
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.93 E-value=4.8e-25 Score=148.72 Aligned_cols=132 Identities=17% Similarity=0.229 Sum_probs=119.6
Q ss_pred ChHHHhHHHHhcCC-ccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHH
Q 031619 13 DSEEDNALFEEDGV-NMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLL 91 (156)
Q Consensus 13 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll 91 (156)
+..++++++++.+. +++ ..+..+.+|||.|+..++.+++++|++. |++++.++..|.||||+|+..++.+++++|+
T Consensus 69 ~~~~~v~~Ll~~~~~~~~--~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 145 (223)
T 2f8y_A 69 DAQGVFQILIRNRATDLD--ARMHDGTTPLILAARLAVEGMLEDLINS-HADVNAVDDLGKSALHWAAAVNNVDAAVVLL 145 (223)
T ss_dssp TCHHHHHHHHHBTTSCTT--CCCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCTTCBCTTSCBHHHHHHHTTCHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCCcc--cCCCCCCcHHHHHHHhCcHHHHHHHHHc-CCCCcCcCCCCCcHHHHHHHcCCHHHHHHHH
Confidence 45567788888765 443 3455778999999999999999999998 9999999999999999999999999999999
Q ss_pred HcCCCCCccCCCCCChHHHHHhCChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhhh
Q 031619 92 ERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQNDL 154 (156)
Q Consensus 92 ~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~~ 154 (156)
+.|++++.+|..|.||||+|+..++.+++++|+++|++++ .+|..|.||+++|++.
T Consensus 146 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-------~~~~~g~t~l~~A~~~ 201 (223)
T 2f8y_A 146 KNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD-------ITDHMDRLPRDIAQER 201 (223)
T ss_dssp HTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT-------CCCTTCCCHHHHHHHT
T ss_pred HcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCc-------cccccCCCHHHHHHHh
Confidence 9999999999999999999999999999999999999985 8999999999999763
No 40
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.93 E-value=2.3e-25 Score=151.72 Aligned_cols=131 Identities=24% Similarity=0.302 Sum_probs=82.0
Q ss_pred HHHhHHHHhcCCc--cCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccC-CCCCcHHHHHHhcCCHHHHHHHH
Q 031619 15 EEDNALFEEDGVN--MDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPV-EDGDTALHLTCLYGYLPCVQLLL 91 (156)
Q Consensus 15 ~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~-~~g~t~l~~a~~~~~~~~~~~ll 91 (156)
.+.++++++.+.. .+....+..+.+|||.|+..++.+++++|++. |++++..+ ..|.||||+|+..++.+++++|+
T Consensus 92 ~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 170 (241)
T 1k1a_A 92 PTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLER-GADIDAVDIKSGRSPLIHAVENNSLSMVQLLL 170 (241)
T ss_dssp HHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHc-CCCcccccccCCCcHHHHHHHcCCHHHHHHHH
Confidence 3445555555441 12233344555666666666666666666666 66666665 56666666666666666666666
Q ss_pred HcCCCCCccCCCCCChHHHHHhCChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhh
Q 031619 92 ERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQND 153 (156)
Q Consensus 92 ~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~ 153 (156)
+.|++++.+|..|.||||+|+..++.+++++|+++|++++ .+|..|.||+|+|++
T Consensus 171 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-------~~~~~g~tpl~~A~~ 225 (241)
T 1k1a_A 171 QHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSS-------LKNCHNDTPLMVARS 225 (241)
T ss_dssp HTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTT-------CCCTTSCCTTTTCSS
T ss_pred HcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCC-------CcCCCCCCHHHHHHh
Confidence 6666666666666666666666666666666666666663 666667777766653
No 41
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.93 E-value=2.6e-25 Score=153.79 Aligned_cols=128 Identities=24% Similarity=0.325 Sum_probs=94.4
Q ss_pred hHHHhHHHHhcCCccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHHc
Q 031619 14 SEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLER 93 (156)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~ 93 (156)
..++++++++.|.+++. ...+.||||.|+..|+.+++++|++. |++++.++..|.||||+|+..++.+++++|++.
T Consensus 81 ~~~~v~~Ll~~g~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 156 (261)
T 2xai_A 81 SWDCVNLLLQHGASVQP---ESDLASPIHEAARRGHVECVNSLIAY-GGNIDHKISHLGTPLYLACENQQRACVKKLLES 156 (261)
T ss_dssp CHHHHHHHHHTTCCSSC---SCTTCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCCCCC---CCCCCCHHHHHHHcCcHHHHHHHHHc-CCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHc
Confidence 34566666776666553 22356777777777777777777777 777777777777888888777778888888777
Q ss_pred CCCCCccCCCCCChHHHHHhCChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhh
Q 031619 94 GASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQND 153 (156)
Q Consensus 94 ~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~ 153 (156)
|++++. +..|.||||+|+..++.+++++|+++|++++ .+|.+|+||+|+|++
T Consensus 157 g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~-------~~d~~g~tpl~~A~~ 208 (261)
T 2xai_A 157 GADVNQ-GKGQDSPLHAVARTASEELACLLMDFGADTQ-------AKNAEGKRPVELVPP 208 (261)
T ss_dssp TCCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTT-------CCCTTSCCGGGGSCT
T ss_pred CCCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCCCC-------CcCCCCCChhhhccc
Confidence 777774 6677788888888778888888888877774 778888888887753
No 42
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.93 E-value=5.1e-25 Score=146.40 Aligned_cols=132 Identities=16% Similarity=0.190 Sum_probs=115.3
Q ss_pred CChHHHhHHHHhcCCccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHH
Q 031619 12 DDSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLL 91 (156)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll 91 (156)
++.+.+..++.+.+.+++. .+..+.||||+|+..|+.+++++|++. |++++.++..|.||||+|+..++.+++++|+
T Consensus 16 g~~~~v~~ll~~~~~~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll 92 (201)
T 3hra_A 16 RDTKKVKEILQDTTYQVDE--VDTEGNTPLNIAVHNNDIEIAKALIDR-GADINLQNSISDSPYLYAGAQGRTEILAYML 92 (201)
T ss_dssp TCHHHHHHHHTCTTCCTTC--CCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred ccHHHHHHHHHcCCCCCCC--CCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 4444555555554445544 445788999999999999999999999 9999999999999999999999999999999
Q ss_pred -HcCCCCCccCCCCCChHHHHHhCChHHHHHHHHHcc-cCchHHhhhhcccccCCCchhhhhhh
Q 031619 92 -ERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSA-SGTECVKRMLETVDAEGDTDCDDQND 153 (156)
Q Consensus 92 -~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~~-~~~~~~~~~~~~~~~~g~tpl~~a~~ 153 (156)
..+++++..+..|.||||+|+..++.+++++|+++| +++ +.+|..|+||||+|+.
T Consensus 93 ~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------~~~~~~g~t~L~~A~~ 149 (201)
T 3hra_A 93 KHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDI-------DFQNDFGYTALIEAVG 149 (201)
T ss_dssp HHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCT-------TCCCTTSCCHHHHHHH
T ss_pred hccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCc-------CCCCCCCCCHHHHHHH
Confidence 567799999999999999999999999999999999 777 4899999999999985
No 43
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.93 E-value=1.4e-25 Score=152.76 Aligned_cols=131 Identities=23% Similarity=0.300 Sum_probs=115.3
Q ss_pred ChHHHhHHHHhcCCccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCC------CCccCCCCCcHHHHHHhcCCHHH
Q 031619 13 DSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGS------IDEPVEDGDTALHLTCLYGYLPC 86 (156)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~------~~~~~~~g~t~l~~a~~~~~~~~ 86 (156)
+..++++++++.|.+++.. +..+.||||+|+..++.+++++|++. +.+ ++..+..|.||||+|+..++.++
T Consensus 56 ~~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~ 132 (236)
T 1ikn_D 56 NQPEIAEALLGAGCDPELR--DFRGNTPLHLACEQGCLASVGVLTQS-CTTPHLHSILKATNYNGHTCLHLASIHGYLGI 132 (236)
T ss_dssp TCHHHHHCCCSCCCCSCCC--CTTCCCHHHHHHHHTCHHHHHHHHHS-TTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHH
T ss_pred CCHHHHHHHHHcCCCCCCc--CCCCCCHHHHHHHcCCHHHHHHHHhc-ccchhHHHHhhccCCCCCCHHHHHHHcCCHHH
Confidence 3456788888888876654 45788999999999999999999988 554 45677889999999999999999
Q ss_pred HHHHHHcCCCCCccCC-CCCChHHHHHhCChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhh
Q 031619 87 VQLLLERGASLEAKDE-DGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQND 153 (156)
Q Consensus 87 ~~~ll~~~~~~~~~~~-~g~tpL~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~ 153 (156)
+++|++.|++++.++. .|.||||+|+..|+.+++++|+++|++++ .+|..|.||||+|++
T Consensus 133 v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~-------~~~~~g~tpl~~A~~ 193 (236)
T 1ikn_D 133 VELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVN-------RVTYQGYSPYQLTWG 193 (236)
T ss_dssp HHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSC-------CCCTTCCCGGGGCTT
T ss_pred HHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-------cccCCCCCHHHHHHc
Confidence 9999999999999997 99999999999999999999999999984 899999999999975
No 44
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.93 E-value=2.1e-25 Score=153.01 Aligned_cols=112 Identities=29% Similarity=0.340 Sum_probs=105.7
Q ss_pred CchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCccC-CCCCChHHHHHh
Q 031619 35 PPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLERGASLEAKD-EDGAIPLHDACA 113 (156)
Q Consensus 35 ~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~-~~g~tpL~~a~~ 113 (156)
..+.||||.|+..|+.++++.|++ +++++.++..|+||||+|+..|+.+++++|++.|++++.++ ..|.||||+|+.
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~--~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~ 120 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLE--DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 120 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTT--TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHH
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHH
Confidence 367899999999999999999998 78999999999999999999999999999999999999988 889999999999
Q ss_pred CChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhhhc
Q 031619 114 GGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQNDLV 155 (156)
Q Consensus 114 ~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~~~ 155 (156)
.|+.+++++|+++|++++ .+|..|.||||+|++..
T Consensus 121 ~g~~~~v~~Ll~~ga~~~-------~~d~~g~t~l~~A~~~~ 155 (244)
T 3ui2_A 121 YVRPEVVEALVELGADIE-------VEDERGLTALELAREIL 155 (244)
T ss_dssp TTCHHHHHHHHHTTCCTT-------CCCTTCCCHHHHHHHHH
T ss_pred cCCHHHHHHHHHCCCCCC-------CCCCCCCcHHHHHHHHH
Confidence 999999999999999984 89999999999998653
No 45
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.93 E-value=4.9e-25 Score=154.61 Aligned_cols=85 Identities=24% Similarity=0.400 Sum_probs=53.4
Q ss_pred hHHHhHHHHhcCCccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHHc
Q 031619 14 SEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLER 93 (156)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~ 93 (156)
..+.++.+++.|.+++.. +..+.||||+|+..|+.+++++|++. |++++.++..|.||||+|+..|+.+++++|+..
T Consensus 52 ~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~ 128 (299)
T 1s70_B 52 DTEEVLRLLERGADINYA--NVDGLTALHQACIDDNVDMVKFLVEN-GANINQPDNEGWIPLHAAASCGYLDIAEYLISQ 128 (299)
T ss_dssp CHHHHHHHHHHCCCTTCB--CTTCCBHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT
T ss_pred CHHHHHHHHHcCCCCccc--CCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC
Confidence 344555566666554432 33556667777777777777766666 666666666666677666666666666666666
Q ss_pred CCCCCccC
Q 031619 94 GASLEAKD 101 (156)
Q Consensus 94 ~~~~~~~~ 101 (156)
|++++..+
T Consensus 129 g~~~~~~~ 136 (299)
T 1s70_B 129 GAHVGAVN 136 (299)
T ss_dssp TCCTTCCC
T ss_pred CCCCCCcC
Confidence 66655443
No 46
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.93 E-value=6.8e-25 Score=151.66 Aligned_cols=129 Identities=24% Similarity=0.339 Sum_probs=77.8
Q ss_pred hHHHhHHHHhcCCccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHHc
Q 031619 14 SEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLER 93 (156)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~ 93 (156)
..+.++++++.|.+++.. +..+.||||+|+..|+.+++++|++. |++++.++..|.||||+|+..++.+++++|++.
T Consensus 15 ~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 91 (261)
T 2xai_A 15 HQLSLRNLISQGWAVNII--TADHVSPLHEACLGGHLSCVKILLKH-GAQVNGVTADWHTPLFNACVSGSWDCVNLLLQH 91 (261)
T ss_dssp CHHHHHHHHHTTCCSSCC--CTTCCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT
T ss_pred CHHHHHHHHHCCCCCCCc--CCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 344555666666554432 33556666666666666666666666 666666666666666666666666666666666
Q ss_pred CCCCCccCCCCCChHHHHHhCChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhh
Q 031619 94 GASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQND 153 (156)
Q Consensus 94 ~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~ 153 (156)
|++++.. ..|.||||+|+..|+.+++++|+++|++++ .++..|.||||+|++
T Consensus 92 g~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------~~~~~g~t~L~~A~~ 143 (261)
T 2xai_A 92 GASVQPE-SDLASPIHEAARRGHVECVNSLIAYGGNID-------HKISHLGTPLYLACE 143 (261)
T ss_dssp TCCSSCS-CTTCCHHHHHHHTTCHHHHHHHHHTTCCTT-------CCBTTTBCHHHHHHH
T ss_pred CCCCCCC-CCCCCHHHHHHHcCcHHHHHHHHHcCCCCC-------cCCCCCCCHHHHHHH
Confidence 6665542 335566666666666666666666666553 555556666665553
No 47
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.93 E-value=1.6e-25 Score=148.22 Aligned_cols=116 Identities=21% Similarity=0.266 Sum_probs=109.2
Q ss_pred CCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCChHHH
Q 031619 31 ESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHD 110 (156)
Q Consensus 31 ~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~tpL~~ 110 (156)
+..+..+.||||+|+..|+.+++++|++. +.+++.++..|.||||+|+..++.+++++|++.|++++.+|..|.||||+
T Consensus 29 n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 107 (192)
T 2rfm_A 29 NYRDSYNRTPLMVACMLGMENAIDKLVEN-FDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMW 107 (192)
T ss_dssp TCCCTTCCCHHHHHHHHTCGGGHHHHHHH-HCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHH
T ss_pred hCcCCCCCCHHHHHHHcCCHHHHHHHHHh-ccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHH
Confidence 34456788999999999999999999999 89999999999999999999999999999999999999999999999999
Q ss_pred HHhCChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhhh
Q 031619 111 ACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQNDL 154 (156)
Q Consensus 111 a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~~ 154 (156)
|+..++.+++++|+++|++++ .+|..|.||||+|++.
T Consensus 108 A~~~~~~~~v~~Ll~~g~~~~-------~~~~~g~t~L~~A~~~ 144 (192)
T 2rfm_A 108 SIIFGYSEMSYFLLEHGANVN-------DRNLEGETPLIVASKY 144 (192)
T ss_dssp HHHHTCHHHHHHHHHTTCCSS-------CCCTTCCCHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHCCCCCC-------CCCCCCCCHHHHHHHc
Confidence 999999999999999999984 8999999999999863
No 48
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.93 E-value=7e-25 Score=142.48 Aligned_cols=113 Identities=29% Similarity=0.413 Sum_probs=106.3
Q ss_pred CCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCChHHHHHh
Q 031619 34 TPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACA 113 (156)
Q Consensus 34 ~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~tpL~~a~~ 113 (156)
.+.+.++++.|+..|+.+++++|++. |++++.++..|.||||+|+..++.+++++|++.|++++..+..|.||||+|+.
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 89 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMAN-GADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAAL 89 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHH
Confidence 45667999999999999999999999 99999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhhh
Q 031619 114 GGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQNDL 154 (156)
Q Consensus 114 ~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~~ 154 (156)
.++.+++++|+++|++++ .+|..|.||||+|++.
T Consensus 90 ~~~~~~~~~Ll~~g~~~~-------~~~~~g~t~L~~A~~~ 123 (169)
T 2y1l_E 90 FGHLEIVEVLLKNGADVN-------ANDMEGHTPLHLAAMF 123 (169)
T ss_dssp TTCHHHHHHHHHTTCCTT-------CCCTTSCCHHHHHHHT
T ss_pred cCCHHHHHHHHHcCCCCC-------CCCCCCCCHHHHHHHc
Confidence 999999999999999984 8999999999999863
No 49
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.93 E-value=3.7e-25 Score=155.21 Aligned_cols=131 Identities=26% Similarity=0.370 Sum_probs=116.9
Q ss_pred ChHHHhHHHHhcCCccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCC-----------------------
Q 031619 13 DSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVE----------------------- 69 (156)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~----------------------- 69 (156)
+..++++++++.|.+++.. +..+.||||+|+..|+.+++++|++. |++++..+.
T Consensus 84 g~~~~v~~Ll~~ga~~~~~--~~~g~tpL~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~ 160 (299)
T 1s70_B 84 DNVDMVKFLVENGANINQP--DNEGWIPLHAAASCGYLDIAEYLISQ-GAHVGAVNSEGDTPLDIAEEEAMEELLQNEVN 160 (299)
T ss_dssp TCHHHHHHHHHTTCCTTCC--CTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHCCCCCCCC--CCCCCcHHHHHHHcCCHHHHHHHHhC-CCCCCCcCCCCCCHHHHHHhcchHHHHHHHHh
Confidence 4567889999999877654 45788999999999999999999998 888775543
Q ss_pred -------------------------------------CCCcHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCChHHHHH
Q 031619 70 -------------------------------------DGDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDAC 112 (156)
Q Consensus 70 -------------------------------------~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~tpL~~a~ 112 (156)
.|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~ 240 (299)
T 1s70_B 161 RQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAA 240 (299)
T ss_dssp HHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHH
T ss_pred hcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHH
Confidence 4678899999999999999999999999999999999999999
Q ss_pred hCChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhh
Q 031619 113 AGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQND 153 (156)
Q Consensus 113 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~ 153 (156)
..|+.+++++|+++|++++ .+|..|.||||+|++
T Consensus 241 ~~~~~~~v~~Ll~~gad~~-------~~d~~g~t~l~~A~~ 274 (299)
T 1s70_B 241 HWGKEEACRILVENLCDME-------AVNKVGQTAFDVADE 274 (299)
T ss_dssp HTTCHHHHHHHHHTTCCTT-------CCCTTSCCTTTSCCS
T ss_pred hcCCHHHHHHHHHcCCCCC-------CcCCCCCCHHHHHHH
Confidence 9999999999999999985 999999999999965
No 50
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.93 E-value=2.9e-25 Score=154.88 Aligned_cols=132 Identities=23% Similarity=0.281 Sum_probs=111.4
Q ss_pred ChHHHhHHHHhcCC-ccCCCCCCCchHHHHHHHH-----hcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHH
Q 031619 13 DSEEDNALFEEDGV-NMDLESETPPHLRDLAAAA-----QLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPC 86 (156)
Q Consensus 13 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~a~-----~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~ 86 (156)
+..++++++++.|. +++. .+..+.||||.|+ ..++.++++++++. |...+..+..|.||||+|+..|+.++
T Consensus 122 g~~~~v~~Ll~~g~~~~~~--~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~-g~~~~~~~~~g~tpLh~A~~~g~~~~ 198 (276)
T 4hbd_A 122 ANFPVVQQLLDSGVCKVDK--QNRAGYSPIMLTALATLKTQDDIETVLQLFRL-GNINAKASQAGQTALMLAVSHGRVDV 198 (276)
T ss_dssp TCHHHHHHHHHTSCCCTTC--CCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHH-SCTTCCCTTTCCCHHHHHHHTTCHHH
T ss_pred CCHHHHHHHHHCCCCcCCC--CCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHc-CCCccccCCCCCCHHHHHHHcCCHHH
Confidence 34556777777776 4443 3446777888887 55677888888877 77777778889999999999999999
Q ss_pred HHHHHHcCCCCCccCCCCCChHHHHHhCChHHHHHHHHH-cccCchHHhhhhcccccCCCchhhhhhhh
Q 031619 87 VQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLIN-SASGTECVKRMLETVDAEGDTDCDDQNDL 154 (156)
Q Consensus 87 ~~~ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~-~~~~~~~~~~~~~~~~~~g~tpl~~a~~~ 154 (156)
+++|++.|++++.+|..|.||||+|+..|+.+++++|++ .|++++ .+|..|.||||+|++.
T Consensus 199 v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~-------~~d~~g~TpL~~A~~~ 260 (276)
T 4hbd_A 199 VKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDIS-------LTDRDGSTALMVALDA 260 (276)
T ss_dssp HHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTT-------CCCTTSCCHHHHHHHH
T ss_pred HHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCc-------CcCCCCCCHHHHHHHc
Confidence 999999999999999999999999999999999999999 899984 8999999999999864
No 51
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.93 E-value=3.4e-25 Score=143.53 Aligned_cols=111 Identities=22% Similarity=0.302 Sum_probs=105.5
Q ss_pred chHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCChHHHHHhCC
Q 031619 36 PHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGG 115 (156)
Q Consensus 36 ~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~tpL~~a~~~~ 115 (156)
.+.||||.|+..|+.++++++++. +.+++.++..|.||||+|+..++.+++++|++.|++++..+..|.||||+|+..+
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 80 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQ-ENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKG 80 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHH-SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred CCcchHHHHHHCCCHHHHHHHHHc-CCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcC
Confidence 356889999999999999999999 8999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhhh
Q 031619 116 FIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQNDL 154 (156)
Q Consensus 116 ~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~~ 154 (156)
+.+++++|+++|++++ .+|..|.||||+|+..
T Consensus 81 ~~~~v~~Ll~~g~~~~-------~~~~~g~t~L~~A~~~ 112 (167)
T 3v31_A 81 YTDIVKMLLDCGVDVN-------EYDWNGGTPLLYAVHG 112 (167)
T ss_dssp CHHHHHHHHHHTCCTT-------CCCTTSCCHHHHHHHT
T ss_pred CHHHHHHHHHCCCCCC-------cCCCCCCCHHHHHHHc
Confidence 9999999999999984 8999999999999863
No 52
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.93 E-value=1.4e-25 Score=154.46 Aligned_cols=130 Identities=21% Similarity=0.213 Sum_probs=114.0
Q ss_pred HHhHHHHhcCCccCCC--CCCCchHHHHHHHHhc---CCHHHHHHHHHhCCCCCCc-----------cCCCCCcHHHHHH
Q 031619 16 EDNALFEEDGVNMDLE--SETPPHLRDLAAAAQL---GDVHSLRLALDNLSGSIDE-----------PVEDGDTALHLTC 79 (156)
Q Consensus 16 ~~~~~~~~~~~~~~~~--~~~~~~~~~l~~a~~~---~~~~~v~~ll~~~~~~~~~-----------~~~~g~t~l~~a~ 79 (156)
.+++++++.|.+++.. ..+..+.||||+|+.. |+.+++++|++. |++++. ++..|.||||+|+
T Consensus 20 ~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~-g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~ 98 (256)
T 2etb_A 20 GLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQI-DKDSGNPKPLVNAQCTDEFYQGHSALHIAI 98 (256)
T ss_dssp THHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHH-HHHTTCSSCGGGCCCCSTTTTTCCHHHHHH
T ss_pred HHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhc-CCcccchhhhcccccccccccCCCHHHHHH
Confidence 3567777888877640 1456788999999999 999999999998 666553 2367999999999
Q ss_pred hcCCHHHHHHHHHcCCCCCccCCC-------------CCChHHHHHhCChHHHHHHHHH---cccCchHHhhhhcccccC
Q 031619 80 LYGYLPCVQLLLERGASLEAKDED-------------GAIPLHDACAGGFIEIVQLLIN---SASGTECVKRMLETVDAE 143 (156)
Q Consensus 80 ~~~~~~~~~~ll~~~~~~~~~~~~-------------g~tpL~~a~~~~~~~~~~~Ll~---~~~~~~~~~~~~~~~~~~ 143 (156)
..++.+++++|++.|++++.++.. |.||||+|+..|+.+++++|++ +|++++ .+|.+
T Consensus 99 ~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n-------~~d~~ 171 (256)
T 2etb_A 99 EKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLE-------ATDSL 171 (256)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTT-------CCCTT
T ss_pred HcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcC-------ccCCC
Confidence 999999999999999999999886 9999999999999999999999 999984 99999
Q ss_pred CCchhhhhhh
Q 031619 144 GDTDCDDQND 153 (156)
Q Consensus 144 g~tpl~~a~~ 153 (156)
|+||||+|+.
T Consensus 172 g~TpLh~A~~ 181 (256)
T 2etb_A 172 GNTVLHALVM 181 (256)
T ss_dssp SCCHHHHHHH
T ss_pred CCCHHHHHHH
Confidence 9999999986
No 53
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.93 E-value=5.5e-26 Score=145.97 Aligned_cols=114 Identities=27% Similarity=0.383 Sum_probs=105.2
Q ss_pred CCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCC-hHHH
Q 031619 32 SETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAI-PLHD 110 (156)
Q Consensus 32 ~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~t-pL~~ 110 (156)
.....+.+|||+|+..|+.+++++|++. |++++.++..|.||||+|+ .++.+++++|++.|++++.+|..|.| |||+
T Consensus 7 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~ 84 (156)
T 1bi7_B 7 SSMEPSADWLATAAARGRVEEVRALLEA-GANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHD 84 (156)
T ss_dssp ---CCSTTHHHHHHHHTCHHHHHHHHTT-TCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHH
T ss_pred CCCccchHHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHH
Confidence 3445678999999999999999999998 9999999999999999985 89999999999999999999999999 9999
Q ss_pred HHhCChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhhh
Q 031619 111 ACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQNDL 154 (156)
Q Consensus 111 a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~~ 154 (156)
|+..|+.+++++|+++|++++ .+|..|+||||+|++.
T Consensus 85 A~~~~~~~~v~~Ll~~ga~~~-------~~d~~g~tpl~~A~~~ 121 (156)
T 1bi7_B 85 AAREGFLDTLVVLHRAGARLD-------VRDAWGRLPVDLAEEL 121 (156)
T ss_dssp HHHHTCHHHHHHHHHHTCCSS-------CCCTTCCCHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHcCCCCc-------ccCCCCCCHHHHHHHh
Confidence 999999999999999999984 8999999999999763
No 54
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.93 E-value=5.5e-25 Score=161.79 Aligned_cols=132 Identities=29% Similarity=0.388 Sum_probs=113.5
Q ss_pred ChHHHhHHHHhcCCccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHH
Q 031619 13 DSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLE 92 (156)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~ 92 (156)
+..++++++++.+.+++.. +..+.||||.|+..|+.+++++|++. |++++.++..|.||||+|+..++.+++++|++
T Consensus 256 g~~~~v~~Ll~~~~~~~~~--~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~ 332 (437)
T 1n11_A 256 GHAEMVALLLSKQANGNLG--NKSGLTPLHLVAQEGHVPVADVLIKH-GVMVDATTRMGYTPLHVASHYGNIKLVKFLLQ 332 (437)
T ss_dssp TCHHHHHHHHTTTCCTTCC--CTTCCCHHHHHHHHTCHHHHHHHHHH-TCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHH
T ss_pred CCHHHHHHHHhcCCCCCCC--CCCCCCHHHHHHHcCCHHHHHHHHhC-CccCCCCCCCCCCHHHHHHHcCcHHHHHHHHh
Confidence 3456777788877766544 44677889999999999999999988 88899889999999999999999999999999
Q ss_pred cCCCCCccCCCCCChHHHHHhCChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhhh
Q 031619 93 RGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQNDL 154 (156)
Q Consensus 93 ~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~~ 154 (156)
.|++++.+|..|.||||+|+..|+.+++++|+++|++++ .+|.+|.||+++|++.
T Consensus 333 ~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~-------~~~~~g~t~l~~A~~~ 387 (437)
T 1n11_A 333 HQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPN-------EVSSDGTTPLAIAKRL 387 (437)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSC-------CCCSSSCCHHHHHHHT
T ss_pred cCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCC-------CCCCCCCCHHHHHHHc
Confidence 999999999999999999999999999999999999984 8899999999998753
No 55
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.93 E-value=1.2e-24 Score=147.93 Aligned_cols=131 Identities=21% Similarity=0.277 Sum_probs=90.4
Q ss_pred hHHHhHHHHhcCCccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHHc
Q 031619 14 SEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLER 93 (156)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~ 93 (156)
..++++++++.|.+++.. +..+.+|||.|+..|+.+++++|++.++.+++.++..|.||||+|+..++.+++++|++.
T Consensus 56 ~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~ 133 (237)
T 3b7b_A 56 HLEAVKYLIKAGALVDPK--DAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSK 133 (237)
T ss_dssp CHHHHHHHHTTTCCCCCC--CTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CHHHHHHHHhCCCCCCCC--CCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 345566666666654433 335566777777777777777777663366666677777777777777777777777777
Q ss_pred CCCCCccCCCCCChHHHHHhCChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhh
Q 031619 94 GASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQND 153 (156)
Q Consensus 94 ~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~ 153 (156)
|++++.++..|.||||+|+..|+.+++++|+++|++++ .+|..|.||||+|++
T Consensus 134 g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-------~~~~~g~t~L~~A~~ 186 (237)
T 3b7b_A 134 GSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLH-------AVNIHGDSPLHIAAR 186 (237)
T ss_dssp TCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTT-------CCCTTCCCHHHHHHH
T ss_pred CCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCC-------CcCCCCCCHHHHHHH
Confidence 77777777777777777777777777777777777763 677777777777765
No 56
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.93 E-value=6.5e-26 Score=149.83 Aligned_cols=112 Identities=14% Similarity=0.079 Sum_probs=101.9
Q ss_pred CchHHHHHHHHhcCCH----HHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCC------HHHHHHHHHcCCCCCccCCCC
Q 031619 35 PPHLRDLAAAAQLGDV----HSLRLALDNLSGSIDEPVEDGDTALHLTCLYGY------LPCVQLLLERGASLEAKDEDG 104 (156)
Q Consensus 35 ~~~~~~l~~a~~~~~~----~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~------~~~~~~ll~~~~~~~~~~~~g 104 (156)
..+.||||+|+..++. +++++|++. |++++.++..|+||||+|+..++ .+++++|+..|++++.+|..|
T Consensus 36 ~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~-Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g 114 (186)
T 3t8k_A 36 VLKSNILYDVLRNNNDEARYKISMFLINK-GADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPY 114 (186)
T ss_dssp HHTTTHHHHHTTCSCHHHHHHHHHHHHHT-TCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGG
T ss_pred cCCCCHHHHHHHcCCcchHHHHHHHHHHC-CCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCc
Confidence 4688999999999975 489999998 99999999999999999999886 578999999999999999999
Q ss_pred C-ChHHHHHhCC-----hHHHHHHHHH-cccCchHHhhhhcccccCCCchhhhhhhh
Q 031619 105 A-IPLHDACAGG-----FIEIVQLLIN-SASGTECVKRMLETVDAEGDTDCDDQNDL 154 (156)
Q Consensus 105 ~-tpL~~a~~~~-----~~~~~~~Ll~-~~~~~~~~~~~~~~~~~~g~tpl~~a~~~ 154 (156)
. ||||+|+..+ ..+++++|++ +|++++ .+|..|.||||+|++.
T Consensus 115 ~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~-------~~d~~G~TpL~~A~~~ 164 (186)
T 3t8k_A 115 KIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLL-------IKDKWGLTALEFVKRC 164 (186)
T ss_dssp TBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTT-------CCCTTSCCHHHHHHTT
T ss_pred CchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCc-------ccCCCCCCHHHHHHHc
Confidence 9 9999999944 4579999999 999985 9999999999999874
No 57
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.93 E-value=5.1e-25 Score=154.24 Aligned_cols=132 Identities=14% Similarity=0.074 Sum_probs=106.2
Q ss_pred CCCCCChHHHhHHHHhcCCccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHH
Q 031619 8 MMEEDDSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCV 87 (156)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~ 87 (156)
.++..+..++.+++.+.+ .+..+..+.||||+|+..|+.+++++|++. |++++.+ .|+||||+|+..++.+++
T Consensus 6 ~i~~~~~~~v~~lL~~~~----~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~--~g~t~L~~A~~~g~~~~v 78 (285)
T 3kea_A 6 RINTWKSKQLKSFLSSKD----TFKADVHGHSASYYAIADNNVRLVCTLLNA-GALKNLL--ENEFPLHQAATLEDTKIV 78 (285)
T ss_dssp TGGGCCHHHHHHHHHSTT----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TGGGSCC--TTCCHHHHHTTSSSCHHH
T ss_pred HHHhcCHHHHHHHHHhCC----CCccCCCCCCHHHHHHHcCCHHHHHHHHhC-CCCCCCC--CCCCHHHHHHHcCCHHHH
Confidence 345556677777777653 334456777888888888888888888888 8877766 378888888888888888
Q ss_pred HHHHHcCCCCCccCCCCCChHHHHHhCChHHHHHHHHHcccCchHHhhhhcccccCC-Cchhhhhhh
Q 031619 88 QLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEG-DTDCDDQND 153 (156)
Q Consensus 88 ~~ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g-~tpl~~a~~ 153 (156)
++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++ .++..| .||||+|+.
T Consensus 79 ~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-------~~~~~g~~t~L~~A~~ 138 (285)
T 3kea_A 79 KILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLM-------FYGKTGWKTSFYHAVM 138 (285)
T ss_dssp HHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGG-------GCSSSGGGSHHHHHHH
T ss_pred HHHHHCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCC-------ccCCCCCCCHHHHHHH
Confidence 88888888888888888888888888888888888888888874 778888 788888875
No 58
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.93 E-value=2.4e-24 Score=146.65 Aligned_cols=132 Identities=25% Similarity=0.274 Sum_probs=107.7
Q ss_pred ChHHHhHHHHhcCCccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCC----CCCccCCCCCcHHHHHHhcCCHHHHH
Q 031619 13 DSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSG----SIDEPVEDGDTALHLTCLYGYLPCVQ 88 (156)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~----~~~~~~~~g~t~l~~a~~~~~~~~~~ 88 (156)
+..++++++++.|.+++.. +..+.+|||+|+..++.+++++|++. +. +++..+..|.||||+|+..++.++++
T Consensus 57 ~~~~~v~~Ll~~g~~~~~~--~~~g~t~l~~A~~~~~~~~~~~Ll~~-~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~ 133 (241)
T 1k1a_A 57 TLPSVVRLLVTAGASPMAL--DRHGQTAAHLACEHRSPTCLRALLDS-AAPGTLDLEARNYDGLTALHVAVNTECQETVQ 133 (241)
T ss_dssp TCHHHHHHHHHTTCCTTCC--CTTSCCHHHHHHHTTCHHHHHHHHHH-SCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred CCHHHHHHHHHcCCCcccc--CCCCCCHHHHHHHcCCHHHHHHHHHc-CCCccccccccCcCCCcHHHHHHHcCCHHHHH
Confidence 3456777788888766543 44677888888888888888888887 54 67777888888888888888888888
Q ss_pred HHHHcCCCCCccC-CCCCChHHHHHhCChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhhh
Q 031619 89 LLLERGASLEAKD-EDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQNDL 154 (156)
Q Consensus 89 ~ll~~~~~~~~~~-~~g~tpL~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~~ 154 (156)
+|++.|++++..+ ..|.||||+|+..++.+++++|+++|++++ .+|..|.||||+|++.
T Consensus 134 ~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------~~~~~g~t~L~~A~~~ 193 (241)
T 1k1a_A 134 LLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVN-------AQMYSGSSALHSASGR 193 (241)
T ss_dssp HHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-------CBCTTSCBHHHHHHHH
T ss_pred HHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCC-------CcCCCCCCHHHHHHHc
Confidence 8888888888887 778899999999999999999999888874 8888899999998753
No 59
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.93 E-value=6.9e-25 Score=143.67 Aligned_cols=113 Identities=26% Similarity=0.420 Sum_probs=104.5
Q ss_pred CchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCChHHHHHhC
Q 031619 35 PPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAG 114 (156)
Q Consensus 35 ~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~tpL~~a~~~ 114 (156)
+...++|+.|+..|+.+.++++++..+.+++.++..|.||||+|+..++.+++++|++.|++++.++..|.||||+|+..
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 82 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASH 82 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 45668899999999999999999987888999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhhh
Q 031619 115 GFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQNDL 154 (156)
Q Consensus 115 ~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~~ 154 (156)
++.+++++|+++|++++ .+|..|.||||+|+..
T Consensus 83 ~~~~~v~~Ll~~g~~~~-------~~d~~g~t~L~~A~~~ 115 (179)
T 3f6q_A 83 GHRDIVQKLLQYKADIN-------AVNEHGNVPLHYACFW 115 (179)
T ss_dssp TCHHHHHHHHHTTCCTT-------CCCTTSCCHHHHHHHT
T ss_pred CCHHHHHHHHHcCCCCC-------ccCCCCCCHHHHHHHc
Confidence 99999999999999984 8999999999999864
No 60
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.93 E-value=1.9e-25 Score=150.92 Aligned_cols=110 Identities=28% Similarity=0.370 Sum_probs=105.1
Q ss_pred chHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHHc-CCCCCccCCCCCChHHHHHhC
Q 031619 36 PHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLER-GASLEAKDEDGAIPLHDACAG 114 (156)
Q Consensus 36 ~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~g~tpL~~a~~~ 114 (156)
.+.||||.|+..|+.+++++|++. |++++.++..|.||||+|+..++.+++++|+.. |++++.+|..|.||||+|+..
T Consensus 72 ~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~ 150 (222)
T 3ehr_A 72 SIDNPLHEAAKRGNLSWLRECLDN-RVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWK 150 (222)
T ss_dssp EESCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHH
T ss_pred ccccccccccccCcHHHHHHHHhC-CCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHc
Confidence 456899999999999999999998 999999999999999999999999999999998 999999999999999999999
Q ss_pred ChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhh
Q 031619 115 GFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQND 153 (156)
Q Consensus 115 ~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~ 153 (156)
|+.+++++|+++|++++ .+|.+|.|||++|+.
T Consensus 151 ~~~~~v~~Ll~~ga~~~-------~~~~~g~t~l~~A~~ 182 (222)
T 3ehr_A 151 GYADIVQLLLAKGARTD-------LRNIEKKLAFDMATN 182 (222)
T ss_dssp TCHHHHHHHHHHTCCSC-------CCCTTSCCHHHHCCS
T ss_pred CCHHHHHHHHHcCCCCc-------cccCCCCCHHHHhcc
Confidence 99999999999999984 899999999999974
No 61
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.92 E-value=1.2e-24 Score=152.23 Aligned_cols=128 Identities=25% Similarity=0.333 Sum_probs=102.2
Q ss_pred hHHHhHHHHhcCCccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHHc
Q 031619 14 SEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLER 93 (156)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~ 93 (156)
..++++++++.|.+++.. ..+.||||+|+..|+.+++++|++. |++++.++..|.||||+|+..++.+++++|++.
T Consensus 137 ~~~~v~~Ll~~g~~~~~~---~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ 212 (285)
T 3d9h_A 137 SWDCVNLLLQHGASVQPE---SDLASPIHEAARRGHVECVNSLIAY-GGNIDHKISHLGTPLYLACENQQRACVKKLLES 212 (285)
T ss_dssp CHHHHHHHHHTTCCSSCS---CTTSCHHHHHHHHTCHHHHHHHHHT-TCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCCCCCC---CCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHC
Confidence 345677777777766532 2367888888888888888888887 788888888888888888888888888888888
Q ss_pred CCCCCccCCCCCChHHHHHhCChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhh
Q 031619 94 GASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQND 153 (156)
Q Consensus 94 ~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~ 153 (156)
|++++. +..|.||||+|+..++.+++++|+++|++++ .+|.+|.||||+|+.
T Consensus 213 ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~-------~~d~~g~t~l~~A~~ 264 (285)
T 3d9h_A 213 GADVNQ-GKGQDSPLHAVVRTASEELACLLMDFGADTQ-------AKNAEGKRPVELVPP 264 (285)
T ss_dssp TCCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHTTCCTT-------CCCTTSCCGGGGSCT
T ss_pred CCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-------CcCCCCCCHHHHhcC
Confidence 888874 7788888888888888888888888888874 888888888888863
No 62
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.92 E-value=4.6e-25 Score=157.21 Aligned_cols=131 Identities=16% Similarity=0.129 Sum_probs=97.4
Q ss_pred hHHHhHHHHhcCCccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCC----------
Q 031619 14 SEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGY---------- 83 (156)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~---------- 83 (156)
...+.+++.+.|.++|.. .+..+.||||+|+..|+.+++++|++. |++++.++..|+||||+|+..++
T Consensus 109 ~~~~~~~l~~~g~dvn~~-~d~~g~TpLh~Aa~~g~~~~v~~Ll~~-Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~l 186 (327)
T 1sw6_A 109 LQEVNDAFPNTQLNLNIP-VDEHGNTPLHWLTSIANLELVKHLVKH-GSNRLYGDNMGESCLVKAVKSVNNYDSGTFEAL 186 (327)
T ss_dssp HHHHHHHCTTSCCCSCSC-CSTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHH
T ss_pred HHHHHHHHHhcCCCcccc-cCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHhcccccHHHHHHH
Confidence 345677777888877651 345788999999999999999999998 89998888888888888888655
Q ss_pred -------------------------------HHHHHHHHHcCC-------------------------------------
Q 031619 84 -------------------------------LPCVQLLLERGA------------------------------------- 95 (156)
Q Consensus 84 -------------------------------~~~~~~ll~~~~------------------------------------- 95 (156)
.+++++|++.++
T Consensus 187 l~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~ 266 (327)
T 1sw6_A 187 LDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENL 266 (327)
T ss_dssp HHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHC
T ss_pred HHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHH
Confidence 233334433311
Q ss_pred --------CCCccCCCCCChHHHHHhCChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhh
Q 031619 96 --------SLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQND 153 (156)
Q Consensus 96 --------~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~ 153 (156)
+++.+|..|.||||+|+..|+.+++++|+++|++++ .+|.+|+||||+|++
T Consensus 267 ~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~-------~~d~~G~TpL~~A~~ 325 (327)
T 1sw6_A 267 DLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPF-------IANKSGLRPVDFGAG 325 (327)
T ss_dssp SHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTT-------CCCTTSCCGGGGTCC
T ss_pred HHHHHHHhCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc-------ccCCCCCCHHHHHHh
Confidence 466677777788888888888888888888888774 778888888888764
No 63
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.92 E-value=1.3e-24 Score=140.52 Aligned_cols=114 Identities=28% Similarity=0.393 Sum_probs=106.5
Q ss_pred CCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCChHHHHHh
Q 031619 34 TPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACA 113 (156)
Q Consensus 34 ~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~tpL~~a~~ 113 (156)
+..+.++|+.|+..|+.++++++++..+.+++..+..|.||||+|+..++.+++++|++.|++++.+|..|.||||+|+.
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 84 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACS 84 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHH
Confidence 45678999999999999999999987677888888999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhhh
Q 031619 114 GGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQNDL 154 (156)
Q Consensus 114 ~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~~ 154 (156)
.++.+++++|+++|++++ .+|..|+||||+|++.
T Consensus 85 ~~~~~~v~~Ll~~g~~~~-------~~~~~g~t~L~~A~~~ 118 (165)
T 3twr_A 85 YGHYEVAELLVKHGAVVN-------VADLWKFTPLHEAAAK 118 (165)
T ss_dssp TTCHHHHHHHHHTTCCTT-------CCCTTCCCHHHHHHHT
T ss_pred cCcHHHHHHHHhCCCCCC-------CcCCCCCCHHHHHHHc
Confidence 999999999999999984 8999999999999864
No 64
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.92 E-value=6.2e-25 Score=158.19 Aligned_cols=113 Identities=13% Similarity=0.104 Sum_probs=107.1
Q ss_pred CCchHHHHHHHHhcC--CHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHHcCCC-----CCccCCCCCC
Q 031619 34 TPPHLRDLAAAAQLG--DVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLERGAS-----LEAKDEDGAI 106 (156)
Q Consensus 34 ~~~~~~~l~~a~~~~--~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~-----~~~~~~~g~t 106 (156)
+..+.||||+|+..| +.+++++|++. |++++.++..|.||||+|+..++.+++++|++.|++ ++..|..|.|
T Consensus 135 ~~~g~t~L~~A~~~g~~~~~~v~~Ll~~-ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t 213 (364)
T 3ljn_A 135 HCKGQTALHWCVGLGPEYLEMIKILVQL-GASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNS 213 (364)
T ss_dssp EESCCCHHHHHHHSCGGGHHHHHHHHHH-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCC
T ss_pred CCCCCCHHHHHHHcCCchHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCc
Confidence 446789999999999 99999999999 999999999999999999999999999999999998 9999999999
Q ss_pred hHHHHHhCChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhhh
Q 031619 107 PLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQNDL 154 (156)
Q Consensus 107 pL~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~~ 154 (156)
|||+|+..|+.+++++|+++|++++ .+|..|.||||+|++.
T Consensus 214 ~L~~A~~~g~~~~v~~Ll~~gad~~-------~~d~~g~tpL~~A~~~ 254 (364)
T 3ljn_A 214 HLHWAILINWEDVAMRFVEMGIDVN-------MEDNEHTVPLYLSVRA 254 (364)
T ss_dssp TTHHHHTTTCHHHHHHHHTTTCCTT-------CCCTTSCCHHHHHHHT
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCC-------CCCCCCCCHHHHHHHh
Confidence 9999999999999999999999984 9999999999999863
No 65
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.92 E-value=1.6e-24 Score=127.73 Aligned_cols=92 Identities=36% Similarity=0.568 Sum_probs=88.3
Q ss_pred hHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCChHHHHHhCCh
Q 031619 37 HLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGF 116 (156)
Q Consensus 37 ~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~tpL~~a~~~~~ 116 (156)
+.||||.|+..++.+++++|++. |++++.++..|.||||+|+..++.+++++|++.|++++.+|..|.||||+|+..++
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~-g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~ 80 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEA-GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCcHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence 56899999999999999999998 99999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcccC
Q 031619 117 IEIVQLLINSASG 129 (156)
Q Consensus 117 ~~~~~~Ll~~~~~ 129 (156)
.+++++|+++|++
T Consensus 81 ~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 81 LEVVKLLLEAGAY 93 (93)
T ss_dssp HHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCCC
Confidence 9999999999874
No 66
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.92 E-value=2.5e-24 Score=150.67 Aligned_cols=129 Identities=24% Similarity=0.340 Sum_probs=92.3
Q ss_pred hHHHhHHHHhcCCccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHHc
Q 031619 14 SEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLER 93 (156)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~ 93 (156)
..+.++++++.|.+++. .+..+.||||+|+..|+.+++++|++. |++++.++..|.||||+|+..++.+++++|++.
T Consensus 71 ~~~~v~~Ll~~g~~~~~--~~~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 147 (285)
T 3d9h_A 71 HQLSLRNLISQGWAVNI--ITADHVSPLHEACLGGHLSCVKILLKH-GAQVNGVTADWHTPLFNACVSGSWDCVNLLLQH 147 (285)
T ss_dssp CHHHHHHHHHTTCCSCE--ECTTCCCHHHHHHHTTCHHHHHHHHHT-TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHT
T ss_pred CHHHHHHHHHCCCCCCC--cCCCCCCHHHHHHHCCcHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHC
Confidence 34566777777766543 344567778888888888888887777 777777777777888877777777777777777
Q ss_pred CCCCCccCCCCCChHHHHHhCChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhh
Q 031619 94 GASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQND 153 (156)
Q Consensus 94 ~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~ 153 (156)
|++++..+ .|.||||+|+..|+.+++++|+++|++++ .+|..|.||||+|++
T Consensus 148 g~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-------~~d~~g~t~L~~A~~ 199 (285)
T 3d9h_A 148 GASVQPES-DLASPIHEAARRGHVECVNSLIAYGGNID-------HKISHLGTPLYLACE 199 (285)
T ss_dssp TCCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTTCCTT-------CCBTTTBCHHHHHHH
T ss_pred CCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCC-------CcCCCCCCHHHHHHH
Confidence 77766543 37777777777777777777777777663 667777777777754
No 67
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.92 E-value=8.5e-25 Score=150.77 Aligned_cols=129 Identities=22% Similarity=0.215 Sum_probs=111.2
Q ss_pred HhHHHHhcCCccCCCCC--CCchHHHHHHHH---hcCCHHHHHHHHHhCCC-----------CCCccCCCCCcHHHHHHh
Q 031619 17 DNALFEEDGVNMDLESE--TPPHLRDLAAAA---QLGDVHSLRLALDNLSG-----------SIDEPVEDGDTALHLTCL 80 (156)
Q Consensus 17 ~~~~~~~~~~~~~~~~~--~~~~~~~l~~a~---~~~~~~~v~~ll~~~~~-----------~~~~~~~~g~t~l~~a~~ 80 (156)
+++++.+.+.+++.... +..+.||||+|+ ..|+.+++++|++. |+ ..+..+..|+||||+|+.
T Consensus 24 ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~-g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~ 102 (260)
T 3jxi_A 24 LLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDI-AEKTGNMREFINSPFRDVYYRGQTALHIAIE 102 (260)
T ss_dssp HHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHH-HHHTTCHHHHHTCCBCCSSEESBCHHHHHHH
T ss_pred HHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHh-cccccchHhhhcccccccccCCCCHHHHHHH
Confidence 44555568887775442 367889999999 77999999999987 53 334445689999999999
Q ss_pred cCCHHHHHHHHHcCCCCCccC--------------CCCCChHHHHHhCChHHHHHHHHH---cccCchHHhhhhcccccC
Q 031619 81 YGYLPCVQLLLERGASLEAKD--------------EDGAIPLHDACAGGFIEIVQLLIN---SASGTECVKRMLETVDAE 143 (156)
Q Consensus 81 ~~~~~~~~~ll~~~~~~~~~~--------------~~g~tpL~~a~~~~~~~~~~~Ll~---~~~~~~~~~~~~~~~~~~ 143 (156)
.|+.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|++ +|++++ .+|..
T Consensus 103 ~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~-------~~d~~ 175 (260)
T 3jxi_A 103 RRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLR-------RQDSR 175 (260)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTT-------CCCTT
T ss_pred cCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCc-------ccCCC
Confidence 999999999999999999998 689999999999999999999999 899984 99999
Q ss_pred CCchhhhhhh
Q 031619 144 GDTDCDDQND 153 (156)
Q Consensus 144 g~tpl~~a~~ 153 (156)
|+||||+|++
T Consensus 176 g~TpLh~A~~ 185 (260)
T 3jxi_A 176 GNTVLHALVA 185 (260)
T ss_dssp SCCHHHHHHH
T ss_pred CCcHHHHHHH
Confidence 9999999994
No 68
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.92 E-value=1.5e-24 Score=152.98 Aligned_cols=110 Identities=26% Similarity=0.340 Sum_probs=73.7
Q ss_pred chHHHHHHHHhcCCHHHHHHHHHhCCCCCCc------cCCCCCcHHHHHHhc---CCHHHHHHHHHcCCCCCccCCCCCC
Q 031619 36 PHLRDLAAAAQLGDVHSLRLALDNLSGSIDE------PVEDGDTALHLTCLY---GYLPCVQLLLERGASLEAKDEDGAI 106 (156)
Q Consensus 36 ~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~------~~~~g~t~l~~a~~~---~~~~~~~~ll~~~~~~~~~~~~g~t 106 (156)
...++|+.|+..++.+.++.++.. |.+++. .+..|.||||+|+.. ++.+++++|++.|++++.+|..|.|
T Consensus 150 ~~~~~L~~A~~~g~~~~v~~ll~~-g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~T 228 (301)
T 2b0o_E 150 PEPQRLWTAICNRDLLSVLEAFAN-GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNT 228 (301)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHT-TCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCC
T ss_pred chHHHHhhhhhccCHHHHHHHHhc-CCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCC
Confidence 344566777777777777666665 666665 466667777777665 5666777777777777777767777
Q ss_pred hHHHHHhCChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhh
Q 031619 107 PLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQND 153 (156)
Q Consensus 107 pL~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~ 153 (156)
|||+|+..|+.+++++|+++|++++ .+|.+|.||||+|++
T Consensus 229 pLh~A~~~g~~~~v~~Ll~~gad~~-------~~d~~G~TpL~~A~~ 268 (301)
T 2b0o_E 229 ALHYAALYNQPDCLKLLLKGRALVG-------TVNEAGETALDIARK 268 (301)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCCS-------CCCTTSCCHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCC-------CcCCCCCCHHHHHHH
Confidence 7777777777777777777776663 666667777776654
No 69
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.92 E-value=2.9e-24 Score=137.61 Aligned_cols=110 Identities=27% Similarity=0.371 Sum_probs=103.6
Q ss_pred hHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCChHHHHHhCCh
Q 031619 37 HLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGF 116 (156)
Q Consensus 37 ~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~tpL~~a~~~~~ 116 (156)
+.++||.|+..|+.+.++++++..+.+++..+..|.||||+ +..++.+++++|++.|++++.+|..|.||||+|+..|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 80 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGF 80 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCc
Confidence 45899999999999999999998667899999999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhhh
Q 031619 117 IEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQNDL 154 (156)
Q Consensus 117 ~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~~ 154 (156)
.+++++|+++|++++ .+|..|+||||+|++.
T Consensus 81 ~~~v~~Ll~~g~~~~-------~~~~~g~t~L~~A~~~ 111 (156)
T 1bd8_A 81 LDTLKVLVEHGADVN-------VPDGTGALPIHLAVQE 111 (156)
T ss_dssp HHHHHHHHHTTCCSC-------CCCTTSCCHHHHHHHH
T ss_pred HHHHHHHHHcCCCCC-------CcCCCCCcHHHHHHHh
Confidence 999999999999984 8999999999999863
No 70
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.92 E-value=7.8e-25 Score=153.31 Aligned_cols=113 Identities=19% Similarity=0.164 Sum_probs=84.9
Q ss_pred ChHHHhHHHHhcCCccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHH
Q 031619 13 DSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLE 92 (156)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~ 92 (156)
+..+.++++++.|.+++.. .+.||||+|+..|+.+++++|++. |++++.++..|.||||+|+..++.+++++|++
T Consensus 42 g~~~~v~~Ll~~g~~~~~~----~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~ 116 (285)
T 3kea_A 42 NNVRLVCTLLNAGALKNLL----ENEFPLHQAATLEDTKIVKILLFS-GLDDSQFDDKGNTALYYAVDSGNMQTVKLFVK 116 (285)
T ss_dssp TCHHHHHHHHHTTGGGSCC----TTCCHHHHHTTSSSCHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHHhCCCCCCCC----CCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHh
Confidence 3455677777777766644 356778888888888888888877 77787777788888888888888888888888
Q ss_pred cCCCCCccCCCC-CChHHHHHhCChHHHHHHHHHcccCc
Q 031619 93 RGASLEAKDEDG-AIPLHDACAGGFIEIVQLLINSASGT 130 (156)
Q Consensus 93 ~~~~~~~~~~~g-~tpL~~a~~~~~~~~~~~Ll~~~~~~ 130 (156)
.|++++.++..| .||||+|+..|+.+++++|+++|++.
T Consensus 117 ~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~ 155 (285)
T 3kea_A 117 KNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST 155 (285)
T ss_dssp HCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTT
T ss_pred cCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCcc
Confidence 888887777777 67777777777777777777776654
No 71
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.92 E-value=1.2e-24 Score=140.20 Aligned_cols=109 Identities=30% Similarity=0.382 Sum_probs=103.7
Q ss_pred hHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCChHHHHHhCCh
Q 031619 37 HLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGF 116 (156)
Q Consensus 37 ~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~tpL~~a~~~~~ 116 (156)
..++||.|+..|+.+++++|++. |.+++.++..|.||||+|+. ++.+++++|++.|++++.++..|.||||+|+..++
T Consensus 5 ~~~~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 82 (162)
T 1ihb_A 5 WGNELASAAARGDLEQLTSLLQN-NVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGF 82 (162)
T ss_dssp CHHHHHHHHHHTCHHHHHHHTTS-CCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred HhhHHHHHHHcCCHHHHHHHHhC-CCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC
Confidence 45899999999999999999998 99999999999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhhh
Q 031619 117 IEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQNDL 154 (156)
Q Consensus 117 ~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~~ 154 (156)
.+++++|+++|++++ .+|.+|.||||+|++.
T Consensus 83 ~~~v~~Ll~~g~~~~-------~~~~~g~t~L~~A~~~ 113 (162)
T 1ihb_A 83 LDTLQTLLEFQADVN-------IEDNEGNLPLHLAAKE 113 (162)
T ss_dssp HHHHHHHHHTTCCTT-------CCCTTSCCHHHHHHHT
T ss_pred HHHHHHHHHcCCCCC-------CcCCCCCCHHHHHHHc
Confidence 999999999999984 8999999999999864
No 72
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.92 E-value=9.9e-24 Score=146.44 Aligned_cols=135 Identities=24% Similarity=0.310 Sum_probs=122.1
Q ss_pred ChHHHhHHHHhcCCccCCCCC--------CCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCC-
Q 031619 13 DSEEDNALFEEDGVNMDLESE--------TPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGY- 83 (156)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~- 83 (156)
+..++++++++.|.+++.... +..+.+|||.|+..++.+++++|++..|.+++.++..|.||||+|+..++
T Consensus 116 ~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~ 195 (285)
T 1wdy_A 116 GKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDD 195 (285)
T ss_dssp TCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCT
T ss_pred CCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcccc
Confidence 456688889999888775432 44677999999999999999999998799999999999999999999999
Q ss_pred ---HHHHHHHHHcCCCCCccCCCCCChHHHHHhCChHHHHHHHHH-cccCchHHhhhhcccccCCCchhhhhhhh
Q 031619 84 ---LPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLIN-SASGTECVKRMLETVDAEGDTDCDDQNDL 154 (156)
Q Consensus 84 ---~~~~~~ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~-~~~~~~~~~~~~~~~~~~g~tpl~~a~~~ 154 (156)
.+++++|++.|++++.++..|.||||+|+..++.+++++|++ .|++++ .+|..|+||||+|++.
T Consensus 196 ~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~-------~~~~~g~t~l~~A~~~ 263 (285)
T 1wdy_A 196 SDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEIN-------DTDSDGKTALLLAVEL 263 (285)
T ss_dssp TTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTT-------CCCTTSCCHHHHHHHT
T ss_pred chHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCcc-------ccCCCCCcHHHHHHHc
Confidence 899999999999999999999999999999999999999999 899984 8999999999999863
No 73
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.92 E-value=8.8e-24 Score=146.69 Aligned_cols=140 Identities=18% Similarity=0.238 Sum_probs=120.1
Q ss_pred ChHHHhHHHHhcCCccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHH
Q 031619 13 DSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLE 92 (156)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~ 92 (156)
+..+.++++++.|.+++... +..+.||||+|+..|+.+++++|++. |++++.++..|.||||+|+..++.+++++|++
T Consensus 16 g~~~~v~~Ll~~g~~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 93 (285)
T 1wdy_A 16 EDVDLVQQLLEGGANVNFQE-EEGGWTPLHNAVQMSREDIVELLLRH-GADPVLRKKNGATPFLLAAIAGSVKLLKLFLS 93 (285)
T ss_dssp TCHHHHHHHHHTTCCTTCCC-TTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCccccc-CCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 45677888888888776542 34677999999999999999999999 99999999999999999999999999999999
Q ss_pred cCCCCCccCCCCCChHHHHHhCChHHHHHHHHHcccCchHHh---hhhcccccCCCchhhhhhhh
Q 031619 93 RGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVK---RMLETVDAEGDTDCDDQNDL 154 (156)
Q Consensus 93 ~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~~~~~~~~~---~~~~~~~~~g~tpl~~a~~~ 154 (156)
.|++++..+..|.||||+|+..++.+++++|+++|+++.... ......+..|.||||.|++.
T Consensus 94 ~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~ 158 (285)
T 1wdy_A 94 KGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEK 158 (285)
T ss_dssp TTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHH
T ss_pred cCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHc
Confidence 999999999999999999999999999999999999985100 00011278899999999863
No 74
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.92 E-value=4.1e-24 Score=136.66 Aligned_cols=109 Identities=25% Similarity=0.347 Sum_probs=102.0
Q ss_pred hHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCChHHHHHhCCh
Q 031619 37 HLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGF 116 (156)
Q Consensus 37 ~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~tpL~~a~~~~~ 116 (156)
..++|+.|+..|+.+++++|++. |.+++ .+..|.||||+|+..++.+++++|++.|++++.++..|.||||+|+..++
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~-g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 79 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMAN-GAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGH 79 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHH-TCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred ccHHHHHHHHcCCHHHHHHHHHc-CCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCh
Confidence 35889999999999999999999 77776 57889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhhh
Q 031619 117 IEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQNDL 154 (156)
Q Consensus 117 ~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~~ 154 (156)
.+++++|+++|++++ .+|..|.||||+|++.
T Consensus 80 ~~~v~~Ll~~g~~~~-------~~~~~g~t~L~~A~~~ 110 (153)
T 1awc_B 80 ANIVEVLLKHGADVN-------AKDMLKMTALHWATEH 110 (153)
T ss_dssp HHHHHHHHTTTCCTT-------CCCTTSCCHHHHHHHT
T ss_pred HHHHHHHHHcCCCCC-------CCCCCCCCHHHHHHHc
Confidence 999999999999984 8999999999999863
No 75
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.92 E-value=4.8e-25 Score=150.12 Aligned_cols=130 Identities=22% Similarity=0.221 Sum_probs=110.4
Q ss_pred HhHHHHhcCCcc--CCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHHcC
Q 031619 17 DNALFEEDGVNM--DLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLERG 94 (156)
Q Consensus 17 ~~~~~~~~~~~~--~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~ 94 (156)
.++.+++.+... +++..+..+.||||+|+..|+.+++++|++. |++++.++..|.||||+|+..++.+++++|+..+
T Consensus 23 ~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~ 101 (236)
T 1ikn_D 23 LTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGA-GCDPELRDFRGNTPLHLACEQGCLASVGVLTQSC 101 (236)
T ss_dssp SSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSC-CCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHST
T ss_pred HHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 344444444321 3344556788999999999999999999998 9999999999999999999999999999999998
Q ss_pred CC------CCccCCCCCChHHHHHhCChHHHHHHHHHcccCchHHhhhhccccc-CCCchhhhhhhh
Q 031619 95 AS------LEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDA-EGDTDCDDQNDL 154 (156)
Q Consensus 95 ~~------~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~-~g~tpl~~a~~~ 154 (156)
++ ++..+..|.||||+|+..|+.+++++|+++|++++ .++. .|.||||+|++.
T Consensus 102 ~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------~~~~~~g~tpL~~A~~~ 161 (236)
T 1ikn_D 102 TTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVN-------AQEPCNGRTALHLAVDL 161 (236)
T ss_dssp TTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTT-------CCCTTTCCCHHHHHHHT
T ss_pred cchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-------CCCCCCCCCHHHHHHHc
Confidence 75 56788899999999999999999999999999985 7887 999999999864
No 76
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.91 E-value=4.5e-24 Score=138.83 Aligned_cols=125 Identities=22% Similarity=0.215 Sum_probs=108.8
Q ss_pred ChHHHhHHHHhcCCccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHH
Q 031619 13 DSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLE 92 (156)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~ 92 (156)
+..++++++++.|.+++.. +..+.||||.|+..++.+++++|++. |++++.++..|.||||+|+..++.+++++|++
T Consensus 47 ~~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 123 (172)
T 3v30_A 47 GEIETVRFLLEWGADPHIL--AKERESALSLASTGGYTDIVGLLLER-DVDINIYDWNGGTPLLYAVRGNHVKCVEALLA 123 (172)
T ss_dssp TCHHHHHHHHHHTCCTTCC--CTTCCCHHHHHHHTTCHHHHHHHHTT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCchhh--cccCCCHHHHHHHCCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 4567888999999877654 44678999999999999999999998 99999999999999999999999999999999
Q ss_pred cCCCCCccCCCCCChHHHHHhCChHHHHHHHHHcccCchHHhhhhcccccCCCch
Q 031619 93 RGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTD 147 (156)
Q Consensus 93 ~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tp 147 (156)
.|++++.+|..|.||||+|+..++.+++++|++++++.. .++..|.||
T Consensus 124 ~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~-------~~~~~~~~p 171 (172)
T 3v30_A 124 RGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLF-------QSNLVPADP 171 (172)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHS-------CC-------
T ss_pred cCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHh-------cccCCCCCC
Confidence 999999999999999999999999999999999999874 778888887
No 77
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.91 E-value=6.5e-24 Score=156.11 Aligned_cols=132 Identities=23% Similarity=0.287 Sum_probs=112.6
Q ss_pred ChHHHhHHHHhcCCccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHH
Q 031619 13 DSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLE 92 (156)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~ 92 (156)
+..++++++++.|.+++.. +..+.||||.|+..|+.+++++|++. +++++..+..|.||||+|+..++.+++++|++
T Consensus 223 ~~~~~~~~Ll~~g~~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~ 299 (437)
T 1n11_A 223 NQVEVARSLLQYGGSANAE--SVQGVTPLHLAAQEGHAEMVALLLSK-QANGNLGNKSGLTPLHLVAQEGHVPVADVLIK 299 (437)
T ss_dssp TCHHHHHHHHHTTCCTTCC--CTTCCCHHHHHHHTTCHHHHHHHHTT-TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCCCCC--CCCCCCHHHHHHHCCCHHHHHHHHhc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 3456677777777765543 44677889999999999999998888 88888888899999999999999999999999
Q ss_pred cCCCCCccCCCCCChHHHHHhCChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhhh
Q 031619 93 RGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQNDL 154 (156)
Q Consensus 93 ~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~~ 154 (156)
.|++++.++..|.||||+|+..|+.+++++|+++|++++ .++..|.||||+|++.
T Consensus 300 ~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n-------~~~~~g~t~L~~A~~~ 354 (437)
T 1n11_A 300 HGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVN-------AKTKLGYSPLHQAAQQ 354 (437)
T ss_dssp HTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTT-------CCCTTSCCHHHHHHHT
T ss_pred CCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCC-------CCCCCCCCHHHHHHHC
Confidence 999999999999999999999999999999999999984 8899999999999753
No 78
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.91 E-value=6.1e-25 Score=149.50 Aligned_cols=138 Identities=14% Similarity=0.122 Sum_probs=119.3
Q ss_pred ChHHHhHHHHhcCCccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHH
Q 031619 13 DSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLE 92 (156)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~ 92 (156)
+..+.++++++.|.+++. .+..+.||||+|+..|+.+++++|++. |++++.++..|.||||+|+..++.+++++|++
T Consensus 32 g~~~~v~~Ll~~g~~~~~--~d~~g~tpLh~A~~~g~~~~v~~Ll~~-ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~ 108 (229)
T 2vge_A 32 GELEVVQQAVKEMNDPSQ--PNEEGITALHNAICGANYSIVDFLITA-GANVNSPDSHGWTPLHCAASCNDTVICMALVQ 108 (229)
T ss_dssp TCHHHHHHHHHHSSCTTC--CCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHT
T ss_pred CCHHHHHHHHhcCCCCCC--CCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 345677888888887765 455788999999999999999999999 99999999999999999999999999999999
Q ss_pred cCCCCCccC-CCCCChHHHH--HhCChHHHHHHHHHcccCchHHhh-------------------------hhcccccCC
Q 031619 93 RGASLEAKD-EDGAIPLHDA--CAGGFIEIVQLLINSASGTECVKR-------------------------MLETVDAEG 144 (156)
Q Consensus 93 ~~~~~~~~~-~~g~tpL~~a--~~~~~~~~~~~Ll~~~~~~~~~~~-------------------------~~~~~~~~g 144 (156)
.|++++..+ ..|.||||+| +..++.+++++|+++|++++.... .++.+|.+|
T Consensus 109 ~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~ll~~ga~~~~~~~d~~G 188 (229)
T 2vge_A 109 HGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSAEFGDELSFREGESVTVLRRDGPE 188 (229)
T ss_dssp TTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEESSCBCCSSTTBCCBCTTCEEEEEESSCTT
T ss_pred cCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHHHHHhhccccccCccccccccccccCCCc
Confidence 999999986 6999999999 999999999999999987742110 035567888
Q ss_pred Cchhhhhhh
Q 031619 145 DTDCDDQND 153 (156)
Q Consensus 145 ~tpl~~a~~ 153 (156)
+||||+|++
T Consensus 189 ~TpL~~A~~ 197 (229)
T 2vge_A 189 ETDWWWAAL 197 (229)
T ss_dssp CSSEEEEEE
T ss_pred ccHHHHHHH
Confidence 999998875
No 79
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.91 E-value=2.1e-24 Score=135.57 Aligned_cols=114 Identities=18% Similarity=0.182 Sum_probs=104.7
Q ss_pred CChHHHhHHHHhcCCccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCC-CCcHHHHHHhcCCHHHHHHH
Q 031619 12 DDSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVED-GDTALHLTCLYGYLPCVQLL 90 (156)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~l 90 (156)
.+..+.++++++.|.+++.. +..+.||||+|+. ++.+++++|++. |++++.++.. |.||||+|+..++.+++++|
T Consensus 22 ~~~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~-~~~~~v~~Ll~~-g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 97 (136)
T 1d9s_A 22 RGQVETVRQLLEAGADPNAL--NRFGRRPIQVMMM-GSAQVAELLLLH-GAEPNCADPATLTRPVHDAAREGFLDTLVVL 97 (136)
T ss_dssp TTCHHHHHHHHHTTCCTTCC--CTTCCTTTTTSTT-SCHHHHHHHHHH-TCCSSCCBTTTTBCHHHHHHHHTCHHHHHHH
T ss_pred cCCHHHHHHHHHcCCCcCCc--CCCCCCHHHHHHc-CCHHHHHHHHHC-CCCCCCcCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 34567888888988876654 4578899999999 999999999999 9999999999 99999999999999999999
Q ss_pred HHcCCCCCccCCCCCChHHHHHhCChHHHHHHHHHcccC
Q 031619 91 LERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASG 129 (156)
Q Consensus 91 l~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~~~~ 129 (156)
++.|++++.+|..|.||||+|+..++.+++++|+++|++
T Consensus 98 l~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 98 HRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred HHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999999975
No 80
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.91 E-value=5.4e-24 Score=153.29 Aligned_cols=130 Identities=22% Similarity=0.253 Sum_probs=100.2
Q ss_pred hHHHhHHHHhcCCccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCc---------------------------
Q 031619 14 SEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDE--------------------------- 66 (156)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~--------------------------- 66 (156)
..++++++++.|.+++.. +..+.||||+|+..|+.+++++|++. |++++.
T Consensus 32 ~~~~v~~Ll~~g~~~~~~--d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~ 108 (364)
T 3ljn_A 32 QTDEVRRLIETGVSPTIQ--NRFGCTALHLACKFGCVDTAKYLASV-GEVHSLWHGQKPIHLAVMANKTDLVVALVEGAK 108 (364)
T ss_dssp CHHHHHHHHHTTCCTTCC--CTTCCCHHHHHHHHCCHHHHHHHHHH-CCCCCCBTTBCHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCcccc--CCCCCcHHHHHHHcCCHHHHHHHHHC-CCCccccCCCCHHHHHHHcCCHHHHHHHHHhcc
Confidence 445667777777665543 44667778888888888888888777 555543
Q ss_pred -------------------------cCCCCCcHHHHHHhcC--CHHHHHHHHHcCCCCCccCCCCCChHHHHHhCChHHH
Q 031619 67 -------------------------PVEDGDTALHLTCLYG--YLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIEI 119 (156)
Q Consensus 67 -------------------------~~~~g~t~l~~a~~~~--~~~~~~~ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~ 119 (156)
.+..|.||||+|+..| +.+++++|++.|++++.+|..|.||||+|+..|+.++
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~ 188 (364)
T 3ljn_A 109 ERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREA 188 (364)
T ss_dssp HHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred ccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHH
Confidence 5567788888888888 8888888888888888888888888888888888888
Q ss_pred HHHHHHcccC-----chHHhhhhcccccCCCchhhhhhh
Q 031619 120 VQLLINSASG-----TECVKRMLETVDAEGDTDCDDQND 153 (156)
Q Consensus 120 ~~~Ll~~~~~-----~~~~~~~~~~~~~~g~tpl~~a~~ 153 (156)
+++|+++|++ + +.+|..|+||||+|++
T Consensus 189 v~~Ll~~g~~~~~~~~-------~~~~~~g~t~L~~A~~ 220 (364)
T 3ljn_A 189 LDLMMDTVPSKSSLRL-------DYANKQGNSHLHWAIL 220 (364)
T ss_dssp HHHHHHHCSCSSSCCT-------TCCCTTCCCTTHHHHT
T ss_pred HHHHHhcccccccccc-------cccCCCCCcHHHHHHH
Confidence 8888888877 6 4788888888888875
No 81
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.91 E-value=1.5e-23 Score=131.73 Aligned_cols=112 Identities=21% Similarity=0.345 Sum_probs=102.6
Q ss_pred ChHHHhHHHHhcCCccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHH
Q 031619 13 DSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLE 92 (156)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~ 92 (156)
+..+.++++++.|.+++.. +..+.||||.|+..++.+++++|++. |++++.++..|.||||+|+..++.+++++|++
T Consensus 25 g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~ 101 (136)
T 2jab_A 25 GQDDEVRILMANGADVNAK--DEYGLTPLYLATAHGHLEIVEVLLKN-GADVNAVDAIGFTPLHLAAFIGHLEIAEVLLK 101 (136)
T ss_dssp TCHHHHHHHHHTTCCTTCC--CTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCCCCc--CCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 4556788888888876654 45788999999999999999999998 99999999999999999999999999999999
Q ss_pred cCCCCCccCCCCCChHHHHHhCChHHHHHHHHHcc
Q 031619 93 RGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSA 127 (156)
Q Consensus 93 ~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~~ 127 (156)
.|++++.+|..|.||||+|+..++.+++++|+++|
T Consensus 102 ~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 102 HGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred cCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 99999999999999999999999999999999876
No 82
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.91 E-value=1.9e-24 Score=132.03 Aligned_cols=107 Identities=28% Similarity=0.388 Sum_probs=99.3
Q ss_pred CCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCChHHHHHh
Q 031619 34 TPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACA 113 (156)
Q Consensus 34 ~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~tpL~~a~~ 113 (156)
+..+.++||.|+..++.+++++|++. |++++.++..|.||||+|+..++.+++++|++.|++++.+|..|.||||+|+.
T Consensus 6 d~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~ 84 (115)
T 2l6b_A 6 SKDGNTPLHNAAKNGHAEEVKKLLSK-GADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKK 84 (115)
T ss_dssp SCSSCCHHHHHHHHTCHHHHHHHTTT-TCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHHT
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHH
Confidence 45778999999999999999999998 99999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHcccCchHHhhhhcccccCCCchh
Q 031619 114 GGFIEIVQLLINSASGTECVKRMLETVDAEGDTDC 148 (156)
Q Consensus 114 ~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl 148 (156)
.++.+++++|+++|++++ .++..|.||-
T Consensus 85 ~~~~~~~~~Ll~~ga~~n-------~~~~~~~~~~ 112 (115)
T 2l6b_A 85 NGHHEIVKLLDAKGADVN-------ARSWGSSHHH 112 (115)
T ss_dssp TTCHHHHHHHHTTSSSHH-------HHSCCCC---
T ss_pred CCCHHHHHHHHHcCCCCC-------cCCccccccc
Confidence 999999999999999985 8889998885
No 83
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.91 E-value=1.9e-23 Score=147.41 Aligned_cols=126 Identities=22% Similarity=0.262 Sum_probs=107.6
Q ss_pred HHHhHHHHhcCCccCCC----CCCCchHHHHHHHHhc---CCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHH
Q 031619 15 EEDNALFEEDGVNMDLE----SETPPHLRDLAAAAQL---GDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCV 87 (156)
Q Consensus 15 ~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~a~~~---~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~ 87 (156)
...++.+++.|.+++.. ..+..+.||||+|+.. ++.+++++|++. |++++.++..|+||||+|+..++.+++
T Consensus 164 ~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~-gadvn~~d~~G~TpLh~A~~~g~~~~v 242 (301)
T 2b0o_E 164 LLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQN-GGHLDAKAADGNTALHYAALYNQPDCL 242 (301)
T ss_dssp HHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHH-SSCTTCCCTTCCCHHHHHHHTTCHHHH
T ss_pred HHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhc-CCCCCCCCCCCCCHHHHHHHcCCHHHH
Confidence 33455566778877642 1456788999999987 899999999999 999999999999999999999999999
Q ss_pred HHHHHcCCCCCccCCCCCChHHHHHhCChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhhh
Q 031619 88 QLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQNDL 154 (156)
Q Consensus 88 ~~ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~~ 154 (156)
++|++.|++++.+|..|.||||+|+..++.+++++|+++|++ .|.||||+|+++
T Consensus 243 ~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~-------------~g~tpLh~A~~~ 296 (301)
T 2b0o_E 243 KLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG-------------TFAFPLHVDYSW 296 (301)
T ss_dssp HHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH-------------TTSSCCC-----
T ss_pred HHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC-------------CCCChhHHHHhc
Confidence 999999999999999999999999999999999999998765 379999999875
No 84
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.91 E-value=1.2e-23 Score=149.97 Aligned_cols=112 Identities=23% Similarity=0.293 Sum_probs=104.8
Q ss_pred CchHHHHHHHHhc---CCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCChHHHH
Q 031619 35 PPHLRDLAAAAQL---GDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDA 111 (156)
Q Consensus 35 ~~~~~~l~~a~~~---~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~tpL~~a 111 (156)
..+.+|||.|+.. +..+++++|++. |++++.++..|.||||+|+..++.+++++|++.|++++.+|..|.||||+|
T Consensus 209 ~~~~t~L~~A~~~~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A 287 (351)
T 3utm_A 209 QSHETALHCAVASLHPKRKQVAELLLRK-GANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRA 287 (351)
T ss_dssp TTCCCHHHHHHHCCSTTHHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred CCCCCHHHHHHHHhCccHHHHHHHHHHc-CCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHH
Confidence 4556899999998 558999999998 999999999999999999999999999999999999999999999999999
Q ss_pred HhCChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhhh
Q 031619 112 CAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQNDL 154 (156)
Q Consensus 112 ~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~~ 154 (156)
+..|+.+++++|+++|++++ .+|..|.||+++|.+.
T Consensus 288 ~~~~~~~~v~~Ll~~gad~~-------~~~~~g~tal~~a~~~ 323 (351)
T 3utm_A 288 ALAGHLQTCRLLLSYGSDPS-------IISLQGFTAAQMGNEA 323 (351)
T ss_dssp HHHTCHHHHHHHHHTTCCTT-------CCCTTSCCHHHHSCHH
T ss_pred HHcCcHHHHHHHHHcCCCCC-------CcCCCCCChhhhhhHH
Confidence 99999999999999999985 9999999999998653
No 85
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.91 E-value=1.4e-23 Score=149.67 Aligned_cols=132 Identities=26% Similarity=0.354 Sum_probs=117.4
Q ss_pred CChHHHhHHHHhcCCccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHH
Q 031619 12 DDSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLL 91 (156)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll 91 (156)
++.+.+.+++.+.+.+++. .+..+.||||+|+..|+.+++++|++. |++++.++..|.||||+|+..|+.+++++|+
T Consensus 35 g~~~~v~~ll~~~~~~~~~--~d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll 111 (351)
T 3utm_A 35 GNEEKLMALLTPLNVNCHA--SDGRKSTPLHLAAGYNRVRIVQLLLQH-GADVHAKDKGGLVPLHNACSYGHYEVTELLL 111 (351)
T ss_dssp TCHHHHHHHCCTTTTTCCC--SSTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred CCHHHHHHHHHhcCCCccc--CCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCccCCCCCcHHHHHHHCCCHHHHHHHH
Confidence 4445556666665665543 455788999999999999999999998 9999999999999999999999999999999
Q ss_pred HcCCCCCccCCCCCChHHHHHhCChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhh
Q 031619 92 ERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQND 153 (156)
Q Consensus 92 ~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~ 153 (156)
+.|++++..+..|.||||+|+..|+.+++++|+++|+++. ..+..|.||++.|..
T Consensus 112 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------~~~~~g~~~l~~a~~ 166 (351)
T 3utm_A 112 KHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPT-------LVNCHGKSAVDMAPT 166 (351)
T ss_dssp HTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-------CCCTTSCCHHHHCSS
T ss_pred HCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc-------cccCCCCcchHHHhh
Confidence 9999999999999999999999999999999999999985 889999999998853
No 86
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.91 E-value=1.5e-24 Score=151.19 Aligned_cols=126 Identities=15% Similarity=0.170 Sum_probs=111.0
Q ss_pred HHhcCCccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCC-CCCccCCCCCcHHHHHH-----hcCCHHHHHHHHHcC
Q 031619 21 FEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSG-SIDEPVEDGDTALHLTC-----LYGYLPCVQLLLERG 94 (156)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~-~~~~~~~~g~t~l~~a~-----~~~~~~~~~~ll~~~ 94 (156)
+.+.+.+...+..+..+.||||+|+..|+.+++++|++. |. +++..+..|.||||+|+ ..+..+++++|+..|
T Consensus 95 l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g 173 (276)
T 4hbd_A 95 MSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDS-GVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLG 173 (276)
T ss_dssp HCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-SCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHS
T ss_pred HHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHC-CCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcC
Confidence 333333333445566889999999999999999999999 65 99999999999999999 557789999999999
Q ss_pred CCCCccCCCCCChHHHHHhCChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhhh
Q 031619 95 ASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQNDL 154 (156)
Q Consensus 95 ~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~~ 154 (156)
...+..+..|.||||+|+..|+.+++++|+++|++++ .+|.+|+||||+|++.
T Consensus 174 ~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n-------~~d~~G~TpLh~A~~~ 226 (276)
T 4hbd_A 174 NINAKASQAGQTALMLAVSHGRVDVVKALLACEADVN-------VQDDDGSTALMCACEH 226 (276)
T ss_dssp CTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-------CCCTTSCCHHHHHHHH
T ss_pred CCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCC-------CCCCCCCCHHHHHHHC
Confidence 9999999999999999999999999999999999984 9999999999999864
No 87
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.91 E-value=1.9e-23 Score=156.30 Aligned_cols=108 Identities=27% Similarity=0.342 Sum_probs=83.9
Q ss_pred HHHHHHHHhcCCHHHHHHHHHhCCCCCCcc------CCCCCcHHHHHHh---cCCHHHHHHHHHcCCCCCccCCCCCChH
Q 031619 38 LRDLAAAAQLGDVHSLRLALDNLSGSIDEP------VEDGDTALHLTCL---YGYLPCVQLLLERGASLEAKDEDGAIPL 108 (156)
Q Consensus 38 ~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~------~~~g~t~l~~a~~---~~~~~~~~~ll~~~~~~~~~~~~g~tpL 108 (156)
...||.|+..|+.+.++.|++. |++++.+ +..|.||||+|+. .|+.+++++|++.|++++.+|..|.|||
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~-g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpL 211 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFAN-GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTAL 211 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHT-TCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHH
T ss_pred HHHHHHHHhccCHHHHHHHHhh-cccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHH
Confidence 3567888888888888887777 7777766 6677888888855 6777888888888888888888888888
Q ss_pred HHHHhCChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhh
Q 031619 109 HDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQND 153 (156)
Q Consensus 109 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~ 153 (156)
|+|+..|+.+++++|+++|++++ .+|.+|+||||+|++
T Consensus 212 h~A~~~g~~~~v~~Ll~~ga~~~-------~~d~~g~tpl~~A~~ 249 (497)
T 3lvq_E 212 HYAALYNQPDCLKLLLKGRALVG-------TVNEAGETALDIARK 249 (497)
T ss_dssp HHHTTTTCHHHHHHHHHTCCCCS-------CCCTTCCCHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCC-------CcCCCCCCHHHHHHH
Confidence 88888888888888888888774 777888888888764
No 88
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.91 E-value=2.8e-23 Score=145.07 Aligned_cols=111 Identities=24% Similarity=0.363 Sum_probs=99.5
Q ss_pred CchHHHHHHHHhcCCHHHHHHHHHhCCCCC------CccCCCCCcHHHHHHhc---CCHHHHHHHHHcCCCCCccCCCCC
Q 031619 35 PPHLRDLAAAAQLGDVHSLRLALDNLSGSI------DEPVEDGDTALHLTCLY---GYLPCVQLLLERGASLEAKDEDGA 105 (156)
Q Consensus 35 ~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~------~~~~~~g~t~l~~a~~~---~~~~~~~~ll~~~~~~~~~~~~g~ 105 (156)
.....+|+.|+..++.+.++.++.. |.++ +..+..|.||||+|+.. ++.+++++|++.|++++.+|..|.
T Consensus 128 ~~~l~~l~~a~~~~d~~~~~~ll~~-g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~ 206 (278)
T 1dcq_A 128 AAKLHSLCEAVKTRDIFGLLQAYAD-GVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGS 206 (278)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHT-TCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCC
T ss_pred chhhhhhhhHhhhcccHHHHHHHHh-hcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCC
Confidence 3456789999999999999999988 7774 44478899999999999 889999999999999999999999
Q ss_pred ChHHHHHhCChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhh
Q 031619 106 IPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQND 153 (156)
Q Consensus 106 tpL~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~ 153 (156)
||||+|+..|+.+++++|+++|++++ .+|.+|.||||+|++
T Consensus 207 TpLh~A~~~g~~~~v~~Ll~~gad~~-------~~d~~g~tpL~~A~~ 247 (278)
T 1dcq_A 207 TALHYCCLTDNAECLKLLLRGKASIE-------IANESGETPLDIAKR 247 (278)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTT-------CCCTTSCCHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCC-------CccCCCCCHHHHHHH
Confidence 99999999999999999999999984 899999999999975
No 89
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.91 E-value=9e-24 Score=146.71 Aligned_cols=112 Identities=25% Similarity=0.315 Sum_probs=101.3
Q ss_pred CCchHHHHHHHHhc---CCHHHHHHHHHhCCCCC-----------CccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCc
Q 031619 34 TPPHLRDLAAAAQL---GDVHSLRLALDNLSGSI-----------DEPVEDGDTALHLTCLYGYLPCVQLLLERGASLEA 99 (156)
Q Consensus 34 ~~~~~~~l~~a~~~---~~~~~v~~ll~~~~~~~-----------~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~ 99 (156)
+..+.||||+|+.. |+.+++++|++. |++. ...+..|.||||+|+..++.+++++|++.|++++.
T Consensus 51 ~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~-ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~ 129 (273)
T 2pnn_A 51 PETGKTCLLKAMLNLHNGQNDTIALLLDV-ARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQA 129 (273)
T ss_dssp TTTCCCHHHHHHHSCBTTBCHHHHHHHHH-HHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CcCCCCHHHHHHHHHhcCChHHHHHHHHh-hccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCc
Confidence 56788999999976 999999999998 5432 22567899999999999999999999999999999
Q ss_pred cCC--------------CCCChHHHHHhCChHHHHHHHHH---cccCchHHhhhhcccccCCCchhhhhhh
Q 031619 100 KDE--------------DGAIPLHDACAGGFIEIVQLLIN---SASGTECVKRMLETVDAEGDTDCDDQND 153 (156)
Q Consensus 100 ~~~--------------~g~tpL~~a~~~~~~~~~~~Ll~---~~~~~~~~~~~~~~~~~~g~tpl~~a~~ 153 (156)
++. .|.||||+|+..|+.+++++|++ +|++++ .+|.+|+||||+|++
T Consensus 130 ~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~-------~~d~~g~tpLh~A~~ 193 (273)
T 2pnn_A 130 AANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADIS-------ARDSVGNTVLHALVE 193 (273)
T ss_dssp CBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTT-------CCCTTSCCHHHHHHH
T ss_pred cccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCce-------eeCCCCCcHHHHHHH
Confidence 987 79999999999999999999999 899984 899999999999986
No 90
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.91 E-value=6.3e-23 Score=139.24 Aligned_cols=131 Identities=21% Similarity=0.188 Sum_probs=110.9
Q ss_pred ChHHHhHHHHhcCCccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccC-CCCCcHHHHHHhcCCHHHHHHHH
Q 031619 13 DSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPV-EDGDTALHLTCLYGYLPCVQLLL 91 (156)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~-~~g~t~l~~a~~~~~~~~~~~ll 91 (156)
+..+.++.+++.|.+++.. +..+.+|||.|+..|+.+++++|++. +.+++... ..|.||||+|+..++.+++++|+
T Consensus 20 g~~~~~~~Ll~~g~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll 96 (240)
T 3eu9_A 20 GIYERCRELVEAGYDVRQP--DKENVTLLHWAAINNRIDLVKYYISK-GAIVDQLGGDLNSTPLHWATRQGHLSMVVQLM 96 (240)
T ss_dssp TCHHHHHHHHHTTCCTTCC--CTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHH
T ss_pred CChHHHHHHHHcCCCcCCC--CCCCCCHHHHHHHhCCHHHHHHHHHc-CCcchhhcCCcCCChhHHHHHcCCHHHHHHHH
Confidence 4556778888888766543 45678899999999999999999998 77776554 55899999999999999999999
Q ss_pred HcCCCCCccCCCCCChHHHHHhCChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhh
Q 031619 92 ERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQND 153 (156)
Q Consensus 92 ~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~ 153 (156)
+.|++++..+..|.||||+|+..++.+++++|+++|++++ .++..|.||||.|+.
T Consensus 97 ~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~-------~~~~~g~t~l~~a~~ 151 (240)
T 3eu9_A 97 KYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVD-------MMDQNGMTPLMWAAY 151 (240)
T ss_dssp HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-------CCCTTSCCHHHHHHH
T ss_pred HcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCcc-------ccCCCCCcHHHHHHH
Confidence 9999999999999999999999999999999999998874 788888888888873
No 91
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.90 E-value=2.2e-23 Score=156.05 Aligned_cols=118 Identities=25% Similarity=0.304 Sum_probs=104.3
Q ss_pred ChHHHhHHHHhcCCccCCC----CCCCchHHHHHHHHh---cCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHH
Q 031619 13 DSEEDNALFEEDGVNMDLE----SETPPHLRDLAAAAQ---LGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLP 85 (156)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~a~~---~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~ 85 (156)
++...++.+++.|.+++.. ..+..+.||||+|+. .|+.+++++|++. |++++.+|..|+||||+|+..|+.+
T Consensus 143 g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~-ga~vn~~d~~g~TpLh~A~~~g~~~ 221 (497)
T 3lvq_E 143 RDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQN-GGHLDAKAADGNTALHYAALYNQPD 221 (497)
T ss_dssp TCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHH-SCCTTCCCSSSCCHHHHHTTTTCHH
T ss_pred cCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHc-CCCCCccCCCCCcHHHHHHHcCCHH
Confidence 3445677788888887644 235678899999955 8999999999999 9999999999999999999999999
Q ss_pred HHHHHHHcCCCCCccCCCCCChHHHHHhCChHHHHHHHHHcccCch
Q 031619 86 CVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTE 131 (156)
Q Consensus 86 ~~~~ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~~~~~~ 131 (156)
++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|+++.
T Consensus 222 ~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~ 267 (497)
T 3lvq_E 222 CLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTF 267 (497)
T ss_dssp HHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC---
T ss_pred HHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCC
Confidence 9999999999999999999999999999999999999999999984
No 92
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.90 E-value=8.4e-23 Score=126.00 Aligned_cols=114 Identities=32% Similarity=0.496 Sum_probs=104.3
Q ss_pred ChHHHhHHHHhcCCccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHH
Q 031619 13 DSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLE 92 (156)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~ 92 (156)
+..+.++++++.|.+++.. +..+.+|||.|+..++.+++++|++. |++++.++..|.||||+|+..++.+++++|++
T Consensus 13 ~~~~~v~~Ll~~~~~~~~~--~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~ 89 (126)
T 1n0r_A 13 GHLEVVKLLLEAGADVNAK--DKNGRTPLHLAARNGHLEVVKLLLEA-GADVNAKDKNGRTPLHLAARNGHLEVVKLLLE 89 (126)
T ss_dssp TCHHHHHHHHHHTCCTTCC--CTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CcHHHHHHHHHcCCCCCCc--CCCCCcHHHHHHHcCcHHHHHHHHHc-CCCCcccCCCCCcHHHHHHHcChHHHHHHHHH
Confidence 3456778888888876544 45778999999999999999999998 99999999999999999999999999999999
Q ss_pred cCCCCCccCCCCCChHHHHHhCChHHHHHHHHHcccC
Q 031619 93 RGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASG 129 (156)
Q Consensus 93 ~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~~~~ 129 (156)
.|++++.+|..|.||||+|+..++.+++++|+++|++
T Consensus 90 ~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 90 AGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred cCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 9999999999999999999999999999999999975
No 93
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.90 E-value=5.1e-23 Score=139.69 Aligned_cols=130 Identities=18% Similarity=0.197 Sum_probs=84.5
Q ss_pred HHHhHHHHhcCCccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCC-HHHHHHHHHc
Q 031619 15 EEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGY-LPCVQLLLER 93 (156)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~-~~~~~~ll~~ 93 (156)
.++++++++.|.+++.. +..+.+|||.|+..++.+++++|++. |++++.++..|.||||+|+..+. .+++++|+..
T Consensus 89 ~~~v~~Ll~~g~~~~~~--~~~g~t~l~~A~~~~~~~~~~~Ll~~-~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~ 165 (240)
T 3eu9_A 89 LSMVVQLMKYGADPSLI--DGEGCSCIHLAAQFGHTSIVAYLIAK-GQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTF 165 (240)
T ss_dssp HHHHHHHHHTTCCTTCC--CTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHT
T ss_pred HHHHHHHHHcCCCCccc--CCCCCCHHHHHHHcCHHHHHHHHHhc-CCCccccCCCCCcHHHHHHHhCChHHHHHHHHhc
Confidence 34455555555544332 23445566666666666666666665 56666666666666666664443 5556666666
Q ss_pred CCCCCccCC-CCCChHHHHHhCChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhhh
Q 031619 94 GASLEAKDE-DGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQNDL 154 (156)
Q Consensus 94 ~~~~~~~~~-~g~tpL~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~~ 154 (156)
|++++..+. .|.||||+|+..++.+++++|+++|++++ .+|..|.|||++|++.
T Consensus 166 ~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------~~~~~g~t~l~~A~~~ 220 (240)
T 3eu9_A 166 NVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVD-------AQNIKGESALDLAKQR 220 (240)
T ss_dssp TCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTT-------CBCTTSCBHHHHHHHT
T ss_pred CCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCC-------CcCCCCCCHHHHHHHc
Confidence 666666665 67788888888888888888888888874 7888888888888653
No 94
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.90 E-value=2.7e-23 Score=150.47 Aligned_cols=131 Identities=25% Similarity=0.302 Sum_probs=95.8
Q ss_pred HHHhHHHHhcCC-ccCCCCCCCchHHHHHHHHhcC---CHHHHHHHHHhCCCCCCc--------cCCCCCcHHHHHHhcC
Q 031619 15 EEDNALFEEDGV-NMDLESETPPHLRDLAAAAQLG---DVHSLRLALDNLSGSIDE--------PVEDGDTALHLTCLYG 82 (156)
Q Consensus 15 ~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~a~~~~---~~~~v~~ll~~~~~~~~~--------~~~~g~t~l~~a~~~~ 82 (156)
.++++++++.+. ..+....+..+.||||+|+..+ +.+++++|++. |++++. .+..|.||||+|+..+
T Consensus 212 ~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~-g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g 290 (373)
T 2fo1_E 212 FGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEK-GAKVDYDGAARKDSEKYKGRTALHYAAQVS 290 (373)
T ss_dssp HHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHH-TCCSSCCSGGGTSSSSCCCCCTHHHHHSSC
T ss_pred HHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHC-CCCcccccccccCcccccCCCHHHHHHHhC
Confidence 334455554431 0122333446667777777776 67777777777 777765 4567888888888888
Q ss_pred CHHHHHHHHHcC-CCCCccCCCCCChHHHHHhCChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhh
Q 031619 83 YLPCVQLLLERG-ASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQND 153 (156)
Q Consensus 83 ~~~~~~~ll~~~-~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~ 153 (156)
+.+++++|+..+ ++++.+|..|.||||+|+..|+.+++++|+++|++++ .+|..|.||||+|++
T Consensus 291 ~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~-------~~d~~g~t~l~~A~~ 355 (373)
T 2fo1_E 291 NMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVE-------AVDATDHTARQLAQA 355 (373)
T ss_dssp CHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSS-------CCCSSSCCHHHHHHH
T ss_pred CHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-------CCCCCCCCHHHHHHH
Confidence 888888888765 8888888888888888888888888888888888874 788888888888865
No 95
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.90 E-value=5.5e-23 Score=148.49 Aligned_cols=109 Identities=21% Similarity=0.225 Sum_probs=98.2
Q ss_pred HHHHHHHHhc-CCHHHHHHHHHhCCCCCCccC--CCCCcHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCChHHHHHhC
Q 031619 38 LRDLAAAAQL-GDVHSLRLALDNLSGSIDEPV--EDGDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAG 114 (156)
Q Consensus 38 ~~~l~~a~~~-~~~~~v~~ll~~~~~~~~~~~--~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~tpL~~a~~~ 114 (156)
.++||.|+.. ++.++++.|++. |++++..+ ..|.||||+|+..++.+++++|++.|++++..|..|.||||+|+..
T Consensus 200 ~t~L~~Aa~~~g~~~~v~~LL~~-Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~ 278 (368)
T 3jue_A 200 GALLFRASGHPPSLPTMADALAH-GADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATIL 278 (368)
T ss_dssp HHHHHHHTSSSCCHHHHHHHHHT-TCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred CcHHHHHHHccCCHHHHHHHHHc-CCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 4689999998 999999999988 89999887 7899999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhhh
Q 031619 115 GFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQNDL 154 (156)
Q Consensus 115 ~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~~ 154 (156)
++.+++++|+++|++++ .+|.+|.||||+|++.
T Consensus 279 g~~~~v~~LL~~Gad~~-------~~d~~G~TpL~~A~~~ 311 (368)
T 3jue_A 279 GHTGLACLFLKRGADLG-------ARDSEGRDPLTIAMET 311 (368)
T ss_dssp TCHHHHHHHHHTTCCTT-------CCCTTSCCHHHHHHHT
T ss_pred CcHHHHHHHHHCcCCCC-------CcCCCCCCHHHHHHHC
Confidence 99999999999999984 8899999999999753
No 96
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.90 E-value=1.2e-22 Score=144.93 Aligned_cols=135 Identities=24% Similarity=0.310 Sum_probs=113.4
Q ss_pred ChHHHhHHHHhcCCccCCCCC--------CCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCC-
Q 031619 13 DSEEDNALFEEDGVNMDLESE--------TPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGY- 83 (156)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~- 83 (156)
+..+.++++++.|.+++.... ...+.||||+|+..|+.+++++|+++.|++++.++..|.|++++++..+.
T Consensus 136 ~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~ 215 (337)
T 4g8k_A 136 GKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDD 215 (337)
T ss_dssp TCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCT
T ss_pred CcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCc
Confidence 345678888888888764332 33567899999999999999999977689999999999999988766554
Q ss_pred ---HHHHHHHHHcCCCCCccCCCCCChHHHHHhCChHHHHHHHHHc-ccCchHHhhhhcccccCCCchhhhhhhh
Q 031619 84 ---LPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINS-ASGTECVKRMLETVDAEGDTDCDDQNDL 154 (156)
Q Consensus 84 ---~~~~~~ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~-~~~~~~~~~~~~~~~~~g~tpl~~a~~~ 154 (156)
..++++|++.|++++.+|..|.||||+|+..++.++++.|++. |+++ +.+|.+|+||||+|++.
T Consensus 216 ~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~v-------n~~d~~G~TpL~~A~~~ 283 (337)
T 4g8k_A 216 SDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEI-------NDTDSDGKTALLLAVEL 283 (337)
T ss_dssp TTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCT-------TCBCTTSCBHHHHHHHT
T ss_pred ccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcc-------cCcCCCCCCHHHHHHHc
Confidence 4578899999999999999999999999999999999999885 7787 48999999999999863
No 97
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.89 E-value=2e-22 Score=140.77 Aligned_cols=114 Identities=31% Similarity=0.419 Sum_probs=102.5
Q ss_pred HHhHHHHhcCCccC----CCCCCCchHHHHHHHHhc---CCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHH
Q 031619 16 EDNALFEEDGVNMD----LESETPPHLRDLAAAAQL---GDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQ 88 (156)
Q Consensus 16 ~~~~~~~~~~~~~~----~~~~~~~~~~~l~~a~~~---~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~ 88 (156)
..+..+++.|.+++ ....+..+.||||+|+.. ++.+++++|++. |++++.+|..|.||||+|+..|+.++++
T Consensus 144 ~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~-ga~in~~d~~g~TpLh~A~~~g~~~~v~ 222 (278)
T 1dcq_A 144 FGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQN-SGNLDKQTGKGSTALHYCCLTDNAECLK 222 (278)
T ss_dssp HHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHH-CSCTTCCCTTCCCHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHC-CCCccccCCCCCCHHHHHHHcCCHHHHH
Confidence 34555677777754 344466789999999999 899999999999 9999999999999999999999999999
Q ss_pred HHHHcCCCCCccCCCCCChHHHHHhCChHHHHHHHHHcccCc
Q 031619 89 LLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGT 130 (156)
Q Consensus 89 ~ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~~~~~ 130 (156)
+|++.|++++.+|..|.||||+|+..|+.+++++|+++|++.
T Consensus 223 ~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 223 LLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp HHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred HHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 999999999999999999999999999999999999998764
No 98
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.89 E-value=7.7e-23 Score=148.04 Aligned_cols=127 Identities=24% Similarity=0.292 Sum_probs=63.3
Q ss_pred HhHHHHhcCCccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCC---CCCCccCCCCCcHHHHHHhcC---CHHHHHHH
Q 031619 17 DNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLS---GSIDEPVEDGDTALHLTCLYG---YLPCVQLL 90 (156)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~---~~~~~~~~~g~t~l~~a~~~~---~~~~~~~l 90 (156)
++++|++.|.+++.. +..+.||||+|+..|+.+++++|++. + .+++..+..|.||||+|+..+ +.+++++|
T Consensus 181 iv~~Ll~~ga~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~L 257 (373)
T 2fo1_E 181 LVAYLMKAGADPTIY--NKSERSALHQAAANRDFGMMVYMLNS-TKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLL 257 (373)
T ss_dssp HHHHHHHTTCCSCCC--CTTCCCHHHHHHHTTCHHHHHHHTTS-HHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHH
T ss_pred HHHHHHHCCCCCccc--CCCCCCHHHHHHHCCCHHHHHHHHhc-CccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHH
Confidence 444444444433322 22334444444444444444444443 2 344444445555555555444 44555555
Q ss_pred HHcCCCCCc--------cCCCCCChHHHHHhCChHHHHHHHHHcc-cCchHHhhhhcccccCCCchhhhhhh
Q 031619 91 LERGASLEA--------KDEDGAIPLHDACAGGFIEIVQLLINSA-SGTECVKRMLETVDAEGDTDCDDQND 153 (156)
Q Consensus 91 l~~~~~~~~--------~~~~g~tpL~~a~~~~~~~~~~~Ll~~~-~~~~~~~~~~~~~~~~g~tpl~~a~~ 153 (156)
+..|++++. .+..|.||||+|+..|+.+++++|++++ +++ +.+|..|.||||+|++
T Consensus 258 l~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~-------n~~d~~g~TpL~~A~~ 322 (373)
T 2fo1_E 258 VEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNK-------DKQDEDGKTPIMLAAQ 322 (373)
T ss_dssp HHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCT-------TCCCTTCCCHHHHHHH
T ss_pred HHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCc-------cCcCCCCCCHHHHHHH
Confidence 555555443 3345555555555555555555555543 444 3566666666666654
No 99
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.89 E-value=2e-22 Score=145.55 Aligned_cols=137 Identities=23% Similarity=0.227 Sum_probs=107.4
Q ss_pred ChHHHhHHHHhcCCccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHH
Q 031619 13 DSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLE 92 (156)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~ 92 (156)
+....++.+++.|.+++.......+.||||+|+..++.+++++|++. |++++.++..|+||||+|+..++.+++++|+.
T Consensus 211 g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~-Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~ 289 (368)
T 3jue_A 211 PSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQN-GANVNQADSAGRGPLHHATILGHTGLACLFLK 289 (368)
T ss_dssp CCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHH
Confidence 56677888889999988766557888999999999999999999999 99999999999999999999999999999999
Q ss_pred cCCCCCccCCCCCChHHHHHhCChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhhh
Q 031619 93 RGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQNDL 154 (156)
Q Consensus 93 ~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~~ 154 (156)
.|++++.+|..|.||||+|+..++.+++++|+..+..... ....+..+.|++++..++
T Consensus 290 ~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~----~~~~~~~~~t~l~i~~~~ 347 (368)
T 3jue_A 290 RGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAE----AAQGQAGDETYLDIFRDF 347 (368)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC--------------------------
T ss_pred CcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccc----ccccCCCCCCHHHHHHHH
Confidence 9999999999999999999999999999999998754320 124567788888877654
No 100
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.89 E-value=5e-23 Score=140.68 Aligned_cols=138 Identities=14% Similarity=0.122 Sum_probs=116.5
Q ss_pred ChHHHhHHHHhcCCccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHH
Q 031619 13 DSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLE 92 (156)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~ 92 (156)
+..+.++++++.|.+++.. +..+.||||+|+..|+.+++++|++. |++++.++..|+||||+|+..++.+++++|++
T Consensus 48 g~~~~v~~Ll~~g~~~~~~--d~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~ 124 (239)
T 1ycs_B 48 GEFDLVQRIIYEVDDPSLP--NDEGITALHNAVCAGHTEIVKFLVQF-GVNVNAADSDGWTPLHCAASCNNVQVCKFLVE 124 (239)
T ss_dssp TCHHHHHHHTSTTSSCCCC--CTTSCCHHHHHHHHTCHHHHHHHHHH-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCCCCc--CCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 4456788888888866544 55788999999999999999999999 99999999999999999999999999999999
Q ss_pred cCCCCCccCCCCC-ChHHHH--HhCChHHHHHHHHHcccCchHHhhh--hcccccCCCchhhhhhh
Q 031619 93 RGASLEAKDEDGA-IPLHDA--CAGGFIEIVQLLINSASGTECVKRM--LETVDAEGDTDCDDQND 153 (156)
Q Consensus 93 ~~~~~~~~~~~g~-tpL~~a--~~~~~~~~~~~Ll~~~~~~~~~~~~--~~~~~~~g~tpl~~a~~ 153 (156)
.|++++.++..|. ||||+| +..|+.+++++|+++|+++.....- ....+..+.+|++++.+
T Consensus 125 ~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~ 190 (239)
T 1ycs_B 125 SGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMK 190 (239)
T ss_dssp TTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTTTGGGEEEESSCBCCSSTTBCCBC
T ss_pred cCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhcccccccceEEEEeccCCCCCCccccc
Confidence 9999999998877 999999 7789999999999999987522111 12236778888877643
No 101
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.87 E-value=1.7e-21 Score=138.98 Aligned_cols=139 Identities=19% Similarity=0.258 Sum_probs=103.1
Q ss_pred ChHHHhHHHHhcCCccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHH
Q 031619 13 DSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLE 92 (156)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~ 92 (156)
+..+++++|++.|+++|..+. ..+.||||+|+..|+.+++++|+++ |++++.++..+.++++.+...+...++..++.
T Consensus 36 g~~~~V~~LL~~Gadvn~~~~-~~g~TpLh~A~~~g~~~iv~~Ll~~-ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (337)
T 4g8k_A 36 EDVDLVQQLLEGGANVNFQEE-EGGWTPLHNAVQMSREDIVELLLRH-GADPVLRKKNGATPFILAAIAGSVKLLKLFLS 113 (337)
T ss_dssp TCHHHHHHHHHHTCCTTCCCT-TTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHT
T ss_pred CCHHHHHHHHHCCCCCCccCC-CCCcCHHHHHHHcCCHHHHHHHHHc-CCchhhhccCCCchhHHHHhcccchhhHHhhh
Confidence 344566777777776664322 2356777777777777777777777 77777777777777777777777777777777
Q ss_pred cCCCCCccCCCCCChHHHHHhCChHHHHHHHHHcccCchHHhh---hhcccccCCCchhhhhhh
Q 031619 93 RGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKR---MLETVDAEGDTDCDDQND 153 (156)
Q Consensus 93 ~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~~~~~~~~~~---~~~~~~~~g~tpl~~a~~ 153 (156)
.+++++..|..|.||||+|+..|+.+++++|+++|++++.... .....+..|.||||+|++
T Consensus 114 ~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~ 177 (337)
T 4g8k_A 114 KGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAE 177 (337)
T ss_dssp TTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHH
T ss_pred ccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHH
Confidence 7778888899999999999999999999999999998752111 123456779999999976
No 102
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.87 E-value=3.5e-22 Score=131.88 Aligned_cols=107 Identities=13% Similarity=0.185 Sum_probs=95.4
Q ss_pred hHHHHHHHHhcCCHHHHHHHHHhCCCCCCccC-CCCCcHHHHHHhcCCH----HHHHHHHHcCCCCCccCCCCCChHHHH
Q 031619 37 HLRDLAAAAQLGDVHSLRLALDNLSGSIDEPV-EDGDTALHLTCLYGYL----PCVQLLLERGASLEAKDEDGAIPLHDA 111 (156)
Q Consensus 37 ~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~-~~g~t~l~~a~~~~~~----~~~~~ll~~~~~~~~~~~~g~tpL~~a 111 (156)
++++++.|+..|+.+.++.++.. + ++..+ ..|+||||+|+..++. +++++|++.|++++.+|..|.||||+|
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~-~--~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a 82 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEK-G--YEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPL 82 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHH-S--SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhc-C--cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Confidence 45679999999999999999887 4 34455 7799999999999975 589999999999999999999999999
Q ss_pred HhCCh------HHHHHHHHHcccCchHHhhhhcccccCCC-chhhhhhh
Q 031619 112 CAGGF------IEIVQLLINSASGTECVKRMLETVDAEGD-TDCDDQND 153 (156)
Q Consensus 112 ~~~~~------~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~-tpl~~a~~ 153 (156)
+..++ .+++++|+++|+++ +.+|..|. ||||+|+.
T Consensus 83 ~~~~~~~~~~~~~iv~~Ll~~Gadi-------n~~d~~g~ttpLh~A~~ 124 (186)
T 3t8k_A 83 FQGGGNDITGTTELCKIFLEKGADI-------TALYKPYKIVVFKNIFN 124 (186)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCCS-------SSCBGGGTBCTTGGGGG
T ss_pred HHcCCcchhhHHHHHHHHHHCCCCC-------CccCCCcCchHHHHHHH
Confidence 99876 68899999999998 49999999 99999986
No 103
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.87 E-value=4.7e-22 Score=134.28 Aligned_cols=116 Identities=17% Similarity=0.168 Sum_probs=97.7
Q ss_pred hHHHhHHHHhcCCccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHHc
Q 031619 14 SEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLER 93 (156)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~ 93 (156)
....++++++.|.+++.. +..+.||||+|+..|+.+++++|++..|++++.++..|.||||+|+..++.+++++|+..
T Consensus 85 ~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ 162 (222)
T 3ehr_A 85 NLSWLRECLDNRVGVNGL--DKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAK 162 (222)
T ss_dssp CHHHHHHHHHTTCCTTCC--CTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred cHHHHHHHHhCCCCcccc--CCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 456788888888876644 457889999999999999999999877899999999999999999999999999999999
Q ss_pred CCCCCccCCCCCChHHHHHhCChHHHHHHHHHcccCch
Q 031619 94 GASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTE 131 (156)
Q Consensus 94 ~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~~~~~~ 131 (156)
|++++.+|..|.||||+|+..+..++++.|+..|+...
T Consensus 163 ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~ 200 (222)
T 3ehr_A 163 GARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRT 200 (222)
T ss_dssp TCCSCCCCTTSCCHHHHCCSHHHHHHHC----------
T ss_pred CCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhh
Confidence 99999999999999999999999999999999998874
No 104
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.86 E-value=2.4e-21 Score=113.95 Aligned_cols=78 Identities=38% Similarity=0.589 Sum_probs=73.1
Q ss_pred CCCcHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCChHHHHHhCChHHHHHHHHHcccCchHHhhhhcccccCCCchhh
Q 031619 70 DGDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCD 149 (156)
Q Consensus 70 ~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~ 149 (156)
+|+||||+|+..++.+++++|++.|++++.+|..|.||||+|+..++.+++++|+++|++++ .+|.+|+||||
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-------~~d~~g~t~l~ 73 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVN-------AKDKNGRTPLH 73 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-------CCCTTSCCHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-------ccCCCCCCHHH
Confidence 47899999999999999999999999999999999999999999999999999999999984 89999999999
Q ss_pred hhhhh
Q 031619 150 DQNDL 154 (156)
Q Consensus 150 ~a~~~ 154 (156)
+|++.
T Consensus 74 ~A~~~ 78 (93)
T 1n0q_A 74 LAARN 78 (93)
T ss_dssp HHHHT
T ss_pred HHHHc
Confidence 99863
No 105
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.85 E-value=3.1e-21 Score=119.03 Aligned_cols=103 Identities=21% Similarity=0.293 Sum_probs=90.5
Q ss_pred CChHHHhHHHHhcCCccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHH
Q 031619 12 DDSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLL 91 (156)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll 91 (156)
.+..+.++.+++.|.+++. .+..+.||||+|+..++.+++++|++. |++++.++..|+||||+|+..++.+++++|+
T Consensus 17 ~~~~~~v~~ll~~~~~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll 93 (123)
T 3aaa_C 17 NGDLDEVKDYVAKGEDVNR--TLEGGRKPLHYAADCGQLEILEFLLLK-GADINAPDKHHITPLLSAVYEGHVSCVKLLL 93 (123)
T ss_dssp TTCHHHHHHHHHTTCCTTS--CCTTSSCHHHHHHHTTCHHHHHHHHTT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred cCCHHHHHHHHHcCCCcCc--cCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 3456677888888877654 455788999999999999999999998 9999999999999999999999999999999
Q ss_pred HcCCCCCccCCCCCChHHHHHhCChH
Q 031619 92 ERGASLEAKDEDGAIPLHDACAGGFI 117 (156)
Q Consensus 92 ~~~~~~~~~~~~g~tpL~~a~~~~~~ 117 (156)
+.|++++.+|..|.||||+|...+..
T Consensus 94 ~~ga~~~~~~~~g~t~l~~A~~~~~~ 119 (123)
T 3aaa_C 94 SKGADKTVKGPDGLTAFEATDNQAIK 119 (123)
T ss_dssp HTTCCTTCCCTTSCCHHHHCCCHHHH
T ss_pred HcCCCCCCcCCCCCCHHHHhCCHHHH
Confidence 99999999999999999999544333
No 106
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.85 E-value=1.5e-20 Score=113.99 Aligned_cols=90 Identities=28% Similarity=0.412 Sum_probs=83.7
Q ss_pred CCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCChHHHHH
Q 031619 33 ETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDAC 112 (156)
Q Consensus 33 ~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~tpL~~a~ 112 (156)
.+..+.++||.|+..|+.+++++|++. |++++.++..|.||||+|+..++.+++++|+..|++++.+|..|.||||+|+
T Consensus 20 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~ 98 (110)
T 2zgd_A 20 MGSDLGKKLLEAARAGQDDEVRILMAN-GADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISI 98 (110)
T ss_dssp --CCHHHHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred cCCccchHHHHHHHcCCHHHHHHHHHc-CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHHH
Confidence 345778999999999999999999998 9999999999999999999999999999999999999999999999999999
Q ss_pred hCChHHHHHHH
Q 031619 113 AGGFIEIVQLL 123 (156)
Q Consensus 113 ~~~~~~~~~~L 123 (156)
..++.+++++|
T Consensus 99 ~~~~~~~~~~L 109 (110)
T 2zgd_A 99 DNGNEDLAEIL 109 (110)
T ss_dssp HHTCHHHHHHH
T ss_pred HcCCHHHHHHh
Confidence 99999999876
No 107
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.85 E-value=9.5e-22 Score=123.43 Aligned_cols=114 Identities=19% Similarity=0.228 Sum_probs=98.4
Q ss_pred ChHHHhHHHHhcCCccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccCCCCCcHHHHHHhcCCHHHHHHHHH
Q 031619 13 DSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPVEDGDTALHLTCLYGYLPCVQLLLE 92 (156)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~ 92 (156)
+..+.++++++.|.+++.. +..+.||||+|+..++.+++++|++. |++++.++..|.||||+|+..++.+++++|++
T Consensus 21 ~~~~~~~~Ll~~g~~~~~~--~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 97 (137)
T 3c5r_A 21 GDIPSVEYLLQNGSDPNVK--DHAGWTPLHEACNHGHLKVVELLLQH-KALVNTTGYQNDSPLHDAAKNGHVDIVKLLLS 97 (137)
T ss_dssp TCHHHHHHHHHTTCCSCCC--CTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCCCcC--CCCCCCHHHHHHHcCCHHHHHHHHHc-CCcccCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 3456778888888877654 45788999999999999999999998 99999999999999999999999999999999
Q ss_pred cCCCCCccCCCCCChHHHHHhCChHHHHHHHHHcccC
Q 031619 93 RGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASG 129 (156)
Q Consensus 93 ~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~~~~ 129 (156)
.|++++.+|..|.||||+|+..+..+++++|.+.+..
T Consensus 98 ~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~s 134 (137)
T 3c5r_A 98 YGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNESS 134 (137)
T ss_dssp TTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC------
T ss_pred cCCCCCCCCCCCCCHHHHHhhccHHHHHhhccccccC
Confidence 9999999999999999999999888888887766543
No 108
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.85 E-value=1e-21 Score=139.86 Aligned_cols=133 Identities=13% Similarity=0.002 Sum_probs=103.9
Q ss_pred ChHHHhHHHHhcCCccCCCC---------------CCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCc-cCCCCCcHHH
Q 031619 13 DSEEDNALFEEDGVNMDLES---------------ETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDE-PVEDGDTALH 76 (156)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~-~~~~g~t~l~ 76 (156)
+..++++.+++.|.+.+... +........|.++..+..++++.+++. |++++. ++..|+||||
T Consensus 58 g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~-g~dvn~~~d~~g~TpLh 136 (327)
T 1sw6_A 58 EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNT-QLNLNIPVDEHGNTPLH 136 (327)
T ss_dssp HHHHHHHHHHHHHHC-------------------------------CHHHHHHHHHHHCTTS-CCCSCSCCSTTCCCHHH
T ss_pred chhHHHHHHHHhccCCccccchHhhhcccccccccccCCccchhHHHHHhhHHHHHHHHHhc-CCCcccccCCCCCcHHH
Confidence 55678888888887654311 001111224666766777788887777 999999 8999999999
Q ss_pred HHHhcCCHHHHHHHHHcCCCCCccCCCCCChHHHHHhCCh---HHHHHHHHHcc-cCchHHhhhhcccccCCCchhhhhh
Q 031619 77 LTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGF---IEIVQLLINSA-SGTECVKRMLETVDAEGDTDCDDQN 152 (156)
Q Consensus 77 ~a~~~~~~~~~~~ll~~~~~~~~~~~~g~tpL~~a~~~~~---~~~~~~Ll~~~-~~~~~~~~~~~~~~~~g~tpl~~a~ 152 (156)
+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+ .++++.|++++ +++ +.+|..|+||||+|+
T Consensus 137 ~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~-------~~~d~~g~tpLh~A~ 209 (327)
T 1sw6_A 137 WLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCL-------ILEDSMNRTILHHII 209 (327)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGG-------GEECTTCCCHHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccc-------cCCCCCCCCHHHHHH
Confidence 9999999999999999999999999999999999999998 68888888887 555 589999999999998
Q ss_pred h
Q 031619 153 D 153 (156)
Q Consensus 153 ~ 153 (156)
+
T Consensus 210 ~ 210 (327)
T 1sw6_A 210 I 210 (327)
T ss_dssp H
T ss_pred H
Confidence 6
No 109
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.83 E-value=5e-20 Score=126.24 Aligned_cols=113 Identities=26% Similarity=0.290 Sum_probs=97.9
Q ss_pred ChHHHhHHHHhcCCccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccC-CCCCcHHHHHHhcCCHHHHHHHH
Q 031619 13 DSEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPV-EDGDTALHLTCLYGYLPCVQLLL 91 (156)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~-~~g~t~l~~a~~~~~~~~~~~ll 91 (156)
+....++.+++ +.+++. .+..+.||||+|+..|+.+++++|++. |++++.++ ..|.||||+|+..++.+++++|+
T Consensus 56 g~~~~v~~Ll~-~~~~~~--~d~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll 131 (244)
T 3ui2_A 56 ADEQALSQLLE-DRDVDA--VDENGRTALLFVAGLGSDKCVRLLAEA-GADLDHRDMRGGLTALHMAAGYVRPEVVEALV 131 (244)
T ss_dssp TCHHHHHHTTT-TCCTTC--BCTTSCBHHHHHHHHTCHHHHHHHHHT-TCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHH
T ss_pred CCHHHHHHHHc-CCCCCC--cCCCCCCHHHHHHHCCCHHHHHHHHHc-CCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 34556777777 766554 455788999999999999999999999 99999988 88999999999999999999999
Q ss_pred HcCCCCCccCCCCCChHHHHH----------------hCChHHHHHHHHHcccC
Q 031619 92 ERGASLEAKDEDGAIPLHDAC----------------AGGFIEIVQLLINSASG 129 (156)
Q Consensus 92 ~~~~~~~~~~~~g~tpL~~a~----------------~~~~~~~~~~Ll~~~~~ 129 (156)
..|++++.+|..|.||||+|+ ..|+.+++++|++++.+
T Consensus 132 ~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~~l~~a~~~g~~~iv~~L~~~~~~ 185 (244)
T 3ui2_A 132 ELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQVFE 185 (244)
T ss_dssp HTTCCTTCCCTTCCCHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred HCCCCCCCCCCCCCcHHHHHHHHHhccCCCCHHHHHHHcChHHHHHHHHHhccc
Confidence 999999999999999999988 55778888888886544
No 110
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.83 E-value=7.8e-20 Score=120.07 Aligned_cols=100 Identities=27% Similarity=0.256 Sum_probs=87.9
Q ss_pred hHHHhHHHHhcCCccCCCCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCCCccC-CCCCcHHHHHHhcCCHHHHHHHHH
Q 031619 14 SEEDNALFEEDGVNMDLESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSIDEPV-EDGDTALHLTCLYGYLPCVQLLLE 92 (156)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~-~~g~t~l~~a~~~~~~~~~~~ll~ 92 (156)
....++.+++ +.+++. .+..+.||||+|+..|+.+++++|++. |++++.++ ..|+||||+|+..++.+++++|++
T Consensus 56 ~~~~v~~Ll~-~~~~~~--~d~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~ 131 (183)
T 3deo_A 56 DEQALSQLLE-DRDVDA--VDENGRTALLFVAGLGSDKCVRLLAEA-GADLDHRDMRGGLTALHMAAGYVRPEVVEALVE 131 (183)
T ss_dssp CHHHHHHHTT-TSCTTC--CCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHh-cCCCCC--cCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHH
Confidence 4456667777 766554 455788999999999999999999998 99999988 889999999999999999999999
Q ss_pred cCCCCCccCCCCCChHHHHHhCChH
Q 031619 93 RGASLEAKDEDGAIPLHDACAGGFI 117 (156)
Q Consensus 93 ~~~~~~~~~~~g~tpL~~a~~~~~~ 117 (156)
.|++++.+|..|.||||+|+..++.
T Consensus 132 ~ga~~~~~d~~g~tpl~~A~~~~~~ 156 (183)
T 3deo_A 132 LGADIEVEDERGLTALELAREILKT 156 (183)
T ss_dssp HTCCTTCCCTTSCCHHHHHHHHHHT
T ss_pred cCCCCcCCCCCCCCHHHHHHHhccC
Confidence 9999999999999999999876443
No 111
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.81 E-value=3.9e-21 Score=139.22 Aligned_cols=108 Identities=18% Similarity=0.036 Sum_probs=88.1
Q ss_pred chHHHHHHHHhcCCHHHHHHHHHhCCCCC---CccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCC---CccCCCCCChHH
Q 031619 36 PHLRDLAAAAQLGDVHSLRLALDNLSGSI---DEPVEDGDTALHLTCLYGYLPCVQLLLERGASL---EAKDEDGAIPLH 109 (156)
Q Consensus 36 ~~~~~l~~a~~~~~~~~v~~ll~~~~~~~---~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~---~~~~~~g~tpL~ 109 (156)
.+.||||.|+..|+.+++++|++. |... +..+..|.||||+|+..|+.+++++|++.|+++ +..+.. .||||
T Consensus 91 ~~~T~Lh~Aa~~G~~e~v~~Ll~~-ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh 168 (376)
T 2aja_A 91 KSEVICFVAAITGCSSALDTLCLL-LTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFR 168 (376)
T ss_dssp CHHHHHHHHHHHCCHHHHHHHTTC---CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHH
T ss_pred CcCCHHHHHHHcCCHHHHHHHHHc-CCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHH
Confidence 345999999999999999999988 5522 233456789999999999999999999999752 232233 89999
Q ss_pred HHHhCChHHHHHHHHHcccCchHHhhhhcc--cccCCCchhhhhh
Q 031619 110 DACAGGFIEIVQLLINSASGTECVKRMLET--VDAEGDTDCDDQN 152 (156)
Q Consensus 110 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~--~~~~g~tpl~~a~ 152 (156)
+|+..|+.+++++|+++|+++. . +|..|.||||+|+
T Consensus 169 ~Aa~~G~~eiv~~Ll~~ga~~~-------~~~~d~~g~TpL~~Aa 206 (376)
T 2aja_A 169 LAAENGHLHVLNRLCELAPTEA-------TAMIQAENYYAFRWAA 206 (376)
T ss_dssp HHHHTTCHHHHHHHHHSCGGGH-------HHHHHHHHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHcCCccc-------hhccCCCCCCHHHHHH
Confidence 9999999999999999999974 4 7888999999998
No 112
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.81 E-value=1.2e-19 Score=109.85 Aligned_cols=83 Identities=30% Similarity=0.386 Sum_probs=75.7
Q ss_pred CccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCChHHHHHhCChHHHHHHHHHcccCchHHhhhhcccccCC
Q 031619 65 DEPVEDGDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEG 144 (156)
Q Consensus 65 ~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g 144 (156)
...+..|.||||+|+..++.+++++|+..|++++.+|..|.||||+|+..++.+++++|+++|++++ .+|..|
T Consensus 18 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~-------~~d~~g 90 (110)
T 2zgd_A 18 SHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVX-------AQDKFG 90 (110)
T ss_dssp ----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-------CCCTTS
T ss_pred cccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-------ccccCC
Confidence 3457889999999999999999999999999999999999999999999999999999999999984 899999
Q ss_pred Cchhhhhhhh
Q 031619 145 DTDCDDQNDL 154 (156)
Q Consensus 145 ~tpl~~a~~~ 154 (156)
.||||+|++.
T Consensus 91 ~tpl~~A~~~ 100 (110)
T 2zgd_A 91 KTAFDISIDN 100 (110)
T ss_dssp CCHHHHHHHH
T ss_pred CcHHHHHHHc
Confidence 9999999864
No 113
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.79 E-value=2.6e-19 Score=109.01 Aligned_cols=82 Identities=32% Similarity=0.446 Sum_probs=77.7
Q ss_pred ccCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCChHHHHHhCChHHHHHHHHHcccCchHHhhhhcccccCCC
Q 031619 66 EPVEDGDTALHLTCLYGYLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFIEIVQLLINSASGTECVKRMLETVDAEGD 145 (156)
Q Consensus 66 ~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~ 145 (156)
.+|..|+||||+|+..++.+++++|++.|++++.+|..|.||||+|+..++.+++++|+++|++++ .+|..|.
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-------~~d~~g~ 76 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVN-------ARSKDGN 76 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTT-------CCCTTCC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCc-------ccCCCCC
Confidence 468899999999999999999999999999999999999999999999999999999999999984 8999999
Q ss_pred chhhhhhhh
Q 031619 146 TDCDDQNDL 154 (156)
Q Consensus 146 tpl~~a~~~ 154 (156)
||||+|+..
T Consensus 77 tpl~~A~~~ 85 (115)
T 2l6b_A 77 TPEHLAKKN 85 (115)
T ss_dssp CTTHHHHTT
T ss_pred CHHHHHHHC
Confidence 999999864
No 114
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.77 E-value=2.3e-20 Score=135.22 Aligned_cols=125 Identities=12% Similarity=0.061 Sum_probs=98.3
Q ss_pred ChHHHhHHHHhcCCccCC-CCCCCchHHHHHHHHhcCCHHHHHHHHHhCCCCC---CccCCCCCcHHHHHHhcCCHHHHH
Q 031619 13 DSEEDNALFEEDGVNMDL-ESETPPHLRDLAAAAQLGDVHSLRLALDNLSGSI---DEPVEDGDTALHLTCLYGYLPCVQ 88 (156)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~---~~~~~~g~t~l~~a~~~~~~~~~~ 88 (156)
+..++++++++.|..... ......+.+|||+|+..|+.+++++|++. |+++ +..+.. .||||+|+..|+.++++
T Consensus 103 G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~-gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~ 180 (376)
T 2aja_A 103 GCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCEL-APTEIMAMIQAEN-YHAFRLAAENGHLHVLN 180 (376)
T ss_dssp CCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHS-CTTTHHHHHSHHH-HHHHHHHHHTTCHHHHH
T ss_pred CCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhC-CCCccccccCCCC-CCHHHHHHHCCCHHHHH
Confidence 445677778887763211 12334677899999999999999999998 7652 222233 89999999999999999
Q ss_pred HHHHcCCCCCc--cCCCCCChHHHHH-hCChHHHHHHHHHcccCchHHhhhhcccccCCCchhhhhhh
Q 031619 89 LLLERGASLEA--KDEDGAIPLHDAC-AGGFIEIVQLLINSASGTECVKRMLETVDAEGDTDCDDQND 153 (156)
Q Consensus 89 ~ll~~~~~~~~--~~~~g~tpL~~a~-~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~ 153 (156)
+|++.|++++. .|..|.||||+|+ ..|+.+++++|+++|+. |.|||+.|++
T Consensus 181 ~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~--------------~~taL~~Aa~ 234 (376)
T 2aja_A 181 RLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVM--------------LAYAEIHEFE 234 (376)
T ss_dssp HHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHH--------------HHHHHHCTTT
T ss_pred HHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCCc--------------cchHHHHHHH
Confidence 99999999887 8888999999999 99999999999997632 6678887764
No 115
>2cos_A Serine/threonine protein kinase LATS2; UBA domain, structure genomics, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.5.2.1
Probab=47.92 E-value=20 Score=17.95 Aligned_cols=35 Identities=17% Similarity=0.334 Sum_probs=19.2
Q ss_pred HHHHHHHHcccCchHHhhhhcccccCCCchhhhhhhhc
Q 031619 118 EIVQLLINSASGTECVKRMLETVDAEGDTDCDDQNDLV 155 (156)
Q Consensus 118 ~~~~~Ll~~~~~~~~~~~~~~~~~~~g~tpl~~a~~~~ 155 (156)
..++.|++.|.+.+.....+...+. .-|.-|.+|+
T Consensus 11 qmlq~L~eMGFd~erae~Alk~Tg~---~Gle~AmewL 45 (54)
T 2cos_A 11 QMLQELVNAGCDQEMAGRALKQTGS---RSIEAALEYI 45 (54)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHTS---CCHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHhCc---ccHHHHHHHH
Confidence 4566677777666544444444433 3356666654
No 116
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=37.62 E-value=93 Score=22.99 Aligned_cols=48 Identities=21% Similarity=0.319 Sum_probs=31.9
Q ss_pred HHhcCCHHHHHHHHHhCCCCCCcc--------------CCCCCcHHHHHHhcCCHHHHHHHHH
Q 031619 44 AAQLGDVHSLRLALDNLSGSIDEP--------------VEDGDTALHLTCLYGYLPCVQLLLE 92 (156)
Q Consensus 44 a~~~~~~~~v~~ll~~~~~~~~~~--------------~~~g~t~l~~a~~~~~~~~~~~ll~ 92 (156)
.+..|+...|+.-+.+ |.+++.+ -..|.|.+|+|++..+.+++..|+.
T Consensus 29 gv~e~~~~~ve~y~~~-gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 29 GVVEGDLAAIEAYKSS-GGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp HHHHTCHHHHHHHHTT-TCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHcCChhHHHHHHhc-CCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhh
Confidence 3456888888888877 4444321 1347777777777777777776665
No 117
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=33.10 E-value=41 Score=15.54 Aligned_cols=17 Identities=41% Similarity=0.466 Sum_probs=13.5
Q ss_pred HHHHHhcCCHHHHHHHH
Q 031619 41 LAAAAQLGDVHSLRLAL 57 (156)
Q Consensus 41 l~~a~~~~~~~~v~~ll 57 (156)
+..||..|+.+.++.|-
T Consensus 17 iyvA~seGd~etv~~Le 33 (40)
T 1gp8_A 17 MDAAASKGDVETYRKLK 33 (40)
T ss_dssp HHHHHTTSCHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHH
Confidence 56788899999888754
No 118
>1veg_A NEDD8 ultimate buster-1; ubiquitin associated domain, UBA domain, three helix bundle, structural genomics; NMR {Mus musculus} SCOP: a.5.2.1
Probab=20.13 E-value=1.1e+02 Score=16.75 Aligned_cols=41 Identities=17% Similarity=0.172 Sum_probs=21.1
Q ss_pred CHHHHHHHHHcCCCCCccCCCCCChHHHHHhCChH-HHHHHHHHcccC
Q 031619 83 YLPCVQLLLERGASLEAKDEDGAIPLHDACAGGFI-EIVQLLINSASG 129 (156)
Q Consensus 83 ~~~~~~~ll~~~~~~~~~~~~g~tpL~~a~~~~~~-~~~~~Ll~~~~~ 129 (156)
..+.+..|+..|.+....- .+| ....++. ..+++|+.+..+
T Consensus 29 ~ee~I~~Lv~MGF~~~~A~----~AL--~~t~gdve~A~e~L~sh~~~ 70 (83)
T 1veg_A 29 SQESINQLVYMGFDTVVAE----AAL--RVFGGNVQLAAQTLAHHGGS 70 (83)
T ss_dssp CHHHHHHHHHHSCCHHHHH----HHH--HHTTTCHHHHHHHHHHHTSS
T ss_pred CHHHHHHHHHcCCCHHHHH----HHH--HHcCCCHHHHHHHHHhCCCC
Confidence 3566777777775432211 022 2234443 566777776543
Done!