Query 031623
Match_columns 156
No_of_seqs 52 out of 54
Neff 4.1
Searched_HMMs 13730
Date Mon Mar 25 04:20:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031623.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/031623hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1rr7a_ a.4.1.14 (A:) Middle o 17.2 15 0.0011 24.1 0.4 11 108-118 37-47 (94)
2 d1vyua1 b.34.2.1 (A:39-174) SH 12.8 16 0.0012 25.4 -0.5 6 149-154 64-69 (136)
3 d1vyva1 b.34.2.1 (A:71-215) SH 12.3 17 0.0012 25.1 -0.6 7 149-155 64-70 (145)
4 d1t0ha_ b.34.2.1 (A:) SH3-like 10.2 18 0.0013 24.1 -1.1 7 149-155 62-68 (96)
5 d1kjwa1 b.34.2.1 (A:430-525) P 6.2 42 0.0031 21.0 -0.5 7 148-154 39-45 (96)
6 d2rn8a1 b.34.2.1 (A:176-228) B 6.0 56 0.0041 18.5 0.0 7 147-153 30-36 (53)
7 d1ckaa_ b.34.2.1 (A:) C-Crk, N 5.3 52 0.0038 19.0 -0.5 7 148-154 34-40 (57)
8 d1rh6a_ a.6.1.7 (A:) Excisiona 5.2 71 0.0051 19.3 0.1 11 33-43 28-38 (55)
9 d1auya_ b.121.4.6 (A:) Tymovir 5.1 66 0.0048 23.4 -0.1 8 108-115 84-91 (163)
10 d1e57a_ b.121.4.6 (A:) Tymovir 5.0 59 0.0043 23.6 -0.4 8 108-115 83-90 (160)
No 1
>d1rr7a_ a.4.1.14 (A:) Middle operon regulator, Mor {Bacteriophage Mu [TaxId: 10677]}
Probab=17.16 E-value=15 Score=24.08 Aligned_cols=11 Identities=27% Similarity=0.567 Sum_probs=9.9
Q ss_pred eeccccccCCC
Q 031623 108 YYGGQDIYSHS 118 (156)
Q Consensus 108 yYGGqD~Ys~~ 118 (156)
||||+.+|-|.
T Consensus 37 ~~gG~~lYiP~ 47 (94)
T d1rr7a_ 37 HLGGGQVYIPR 47 (94)
T ss_dssp HHCSSCCCCCC
T ss_pred HHCCeeEeeec
Confidence 89999999875
No 2
>d1vyua1 b.34.2.1 (A:39-174) SH3-like domain of the L-type calcium channel {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=12.79 E-value=16 Score=25.44 Aligned_cols=6 Identities=50% Similarity=1.946 Sum_probs=5.1
Q ss_pred cCCCcC
Q 031623 149 NWWQGT 154 (156)
Q Consensus 149 nWWqGS 154 (156)
+||||-
T Consensus 64 ~WW~~r 69 (136)
T d1vyua1 64 DWWIGR 69 (136)
T ss_dssp SEEEEE
T ss_pred CcEEEE
Confidence 899984
No 3
>d1vyva1 b.34.2.1 (A:71-215) SH3-like domain of the L-type calcium channel {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=12.28 E-value=17 Score=25.06 Aligned_cols=7 Identities=43% Similarity=1.593 Sum_probs=5.5
Q ss_pred cCCCcCC
Q 031623 149 NWWQGTQ 155 (156)
Q Consensus 149 nWWqGSl 155 (156)
+||+|-+
T Consensus 64 ~WW~gr~ 70 (145)
T d1vyva1 64 DWWIGRL 70 (145)
T ss_dssp TEEEEEE
T ss_pred CcEEEEE
Confidence 8999853
No 4
>d1t0ha_ b.34.2.1 (A:) SH3-like domain of the L-type calcium channel {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=10.17 E-value=18 Score=24.06 Aligned_cols=7 Identities=43% Similarity=1.593 Sum_probs=5.7
Q ss_pred cCCCcCC
Q 031623 149 NWWQGTQ 155 (156)
Q Consensus 149 nWWqGSl 155 (156)
+||+|-+
T Consensus 62 ~WW~gr~ 68 (96)
T d1t0ha_ 62 DWWIGRL 68 (96)
T ss_dssp SEEEEEE
T ss_pred CceEEEE
Confidence 7999864
No 5
>d1kjwa1 b.34.2.1 (A:430-525) Psd-95 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=6.24 E-value=42 Score=20.97 Aligned_cols=7 Identities=43% Similarity=1.498 Sum_probs=5.2
Q ss_pred ccCCCcC
Q 031623 148 GNWWQGT 154 (156)
Q Consensus 148 GnWWqGS 154 (156)
.+||+|-
T Consensus 39 ~~WW~~~ 45 (96)
T d1kjwa1 39 EEWWQAR 45 (96)
T ss_dssp SSEEEEE
T ss_pred CceEEEE
Confidence 3899873
No 6
>d2rn8a1 b.34.2.1 (A:176-228) Bruton's tyrosine kinase {Mus musculus [TaxId: 10090]}
Probab=6.04 E-value=56 Score=18.52 Aligned_cols=7 Identities=29% Similarity=1.128 Sum_probs=5.3
Q ss_pred CccCCCc
Q 031623 147 RGNWWQG 153 (156)
Q Consensus 147 RGnWWqG 153 (156)
.++||++
T Consensus 30 ~~~Ww~~ 36 (53)
T d2rn8a1 30 EIHWWRV 36 (53)
T ss_dssp CSSCEEE
T ss_pred CCCeEEE
Confidence 3589986
No 7
>d1ckaa_ b.34.2.1 (A:) C-Crk, N-terminal SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=5.28 E-value=52 Score=18.98 Aligned_cols=7 Identities=29% Similarity=1.398 Sum_probs=5.4
Q ss_pred ccCCCcC
Q 031623 148 GNWWQGT 154 (156)
Q Consensus 148 GnWWqGS 154 (156)
++||+|.
T Consensus 34 ~~Ww~~~ 40 (57)
T d1ckaa_ 34 EQWWNAE 40 (57)
T ss_dssp SSEEEEE
T ss_pred CCeEEEE
Confidence 4899884
No 8
>d1rh6a_ a.6.1.7 (A:) Excisionase Xis {Bacteriophage lambda [TaxId: 10710]}
Probab=5.20 E-value=71 Score=19.34 Aligned_cols=11 Identities=27% Similarity=0.540 Sum_probs=7.6
Q ss_pred ccccCCCCccC
Q 031623 33 ASILSPPSTAM 43 (156)
Q Consensus 33 ~SIFppps~v~ 43 (156)
+.|||||-++-
T Consensus 28 g~I~P~p~K~G 38 (55)
T d1rh6a_ 28 SRIFPPPVKDG 38 (55)
T ss_dssp TCEESCCEEET
T ss_pred CcccCCchhcC
Confidence 56888776653
No 9
>d1auya_ b.121.4.6 (A:) Tymovirus coat protein {TYMV (Turnip yellow mosaic virus) [TaxId: 12154]}
Probab=5.12 E-value=66 Score=23.39 Aligned_cols=8 Identities=50% Similarity=0.771 Sum_probs=7.0
Q ss_pred eecccccc
Q 031623 108 YYGGQDIY 115 (156)
Q Consensus 108 yYGGqD~Y 115 (156)
|||||.+-
T Consensus 84 ~YGG~~ft 91 (163)
T d1auya_ 84 TYGGQIFC 91 (163)
T ss_dssp BSSCEEEE
T ss_pred ccCCcEEE
Confidence 89999975
No 10
>d1e57a_ b.121.4.6 (A:) Tymovirus coat protein {PHMV (Physalis mottle virus) [TaxId: 72539]}
Probab=4.99 E-value=59 Score=23.59 Aligned_cols=8 Identities=50% Similarity=0.958 Sum_probs=6.8
Q ss_pred eecccccc
Q 031623 108 YYGGQDIY 115 (156)
Q Consensus 108 yYGGqD~Y 115 (156)
|||||.+-
T Consensus 83 ~YGG~~ft 90 (160)
T d1e57a_ 83 VYGGQSFV 90 (160)
T ss_dssp SSSEEEEE
T ss_pred ecCCcEEE
Confidence 89999973
Done!