Query 031626
Match_columns 156
No_of_seqs 105 out of 1025
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 04:24:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031626.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031626hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hy3_A 5-formyltetrahydrofolat 100.0 1.8E-28 6.2E-33 193.0 12.2 130 16-156 2-135 (203)
2 2jcb_A 5-formyltetrahydrofolat 99.9 3.6E-27 1.2E-31 185.6 8.3 126 19-156 8-133 (200)
3 1ydm_A Hypothetical protein YQ 99.9 8.8E-27 3E-31 181.3 8.4 122 23-156 1-122 (187)
4 1sou_A 5,10-methenyltetrahydro 99.9 1.4E-25 4.8E-30 175.6 7.7 117 23-156 2-118 (194)
5 1wkc_A HB8 TT1367 protein; str 99.9 1.4E-22 4.9E-27 157.4 7.7 108 23-156 2-109 (184)
6 1sbq_A H91_ORF164, 5,10-methen 99.8 9.9E-21 3.4E-25 147.8 7.0 90 22-123 26-117 (189)
7 3a4c_A DNA replication factor 13.6 1.2E+02 0.0041 20.9 2.4 52 34-88 47-98 (106)
8 2y39_A Nickel and cobalt resis 12.6 3.4E+02 0.012 18.8 4.7 28 29-56 88-115 (118)
9 3t5a_A Long-chain-fatty-acid-- 12.2 3.6E+02 0.012 21.6 5.5 56 37-108 58-113 (480)
10 3ipl_A 2-succinylbenzoate--COA 12.1 3.2E+02 0.011 22.2 5.2 53 37-107 26-78 (501)
No 1
>3hy3_A 5-formyltetrahydrofolate cyclo-ligase; antifolate, cancer, ATP-binding, binding, magnesium, nucleotide-binding; HET: 10F; 1.80A {Homo sapiens} PDB: 3hxt_A* 3hy4_A* 3hy6_A
Probab=99.96 E-value=1.8e-28 Score=193.03 Aligned_cols=130 Identities=25% Similarity=0.411 Sum_probs=115.3
Q ss_pred CchhHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCcCccCCCeEEEEeeCCCCCCCChHHHHHHHHhCCCCCC
Q 031626 16 DLESIFQQKRILRSQVRKTLKSMDPSLRSHEDNAIQKIVLEAPWFKSSQRLCAYISCSALREVDTSKLLSQILQIPNADG 95 (156)
Q Consensus 16 ~m~~~~~~K~~lR~~~~~~R~~l~~~~~~~~s~~I~~~l~~~~~~~~a~~I~~Y~s~~~~~Evdt~~li~~l~~~~~~~~ 95 (156)
+|+++...|++||++++++|++++++++..+++.|+++|++++.|+++++|++|+|++ +||||.+||+++|.
T Consensus 2 ~~~~~~~~K~~LR~~~~~~R~~l~~~~~~~~s~~i~~~l~~~~~~~~a~~I~~Y~~~~--~Evdt~~li~~~~~------ 73 (203)
T 3hy3_A 2 AAAAVSSAKRSLRGELKQRLRAMSAEERLRQSRVLSQKVIAHSEYQKSKRISIFLSMQ--DEIETEEIIKDIFQ------ 73 (203)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHTCHHHHHCSEEECCCCCT--TSCCCHHHHHHHHH------
T ss_pred chhHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhCHhhhcCCEEEEEcCCC--CCcCHHHHHHHHHH------
Confidence 5788999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred CCCCCcEEEEeeEeCCCCceEEEEeCCCC---CCccCcCcccCCCCCCCC-CCCCCCceeEEEEC
Q 031626 96 DTKTRKKLYVPRVEDKNSHMRMFHISSID---DLIANSMNILEPAPVDAD-GNEREDGILLFIML 156 (156)
Q Consensus 96 ~~~~gk~V~lP~v~~~~~~m~f~~~~~~~---~L~~g~~GI~EP~~~~~~-~~~~~~~ldliiv~ 156 (156)
.||+|+||++...++.|.|+.|.+.+ .|.+|+|||+||...... .....+.+|+|||+
T Consensus 74 ---~gk~v~lP~~~~~~~~m~~~~~~~~~~~~~L~~g~~GI~EP~~~~~~~~~~~~~~~DlvlVP 135 (203)
T 3hy3_A 74 ---RGKICFIPRYRFQSNHMDMVRIESPEEISLLPKTSWNIPQPGEGDVREEALSTGGLDLIFMP 135 (203)
T ss_dssp ---TTCEEEEEEEETTTTEEEEEEECCHHHHTTSCBCTTSCBCCCTTCCCCBGGGTTCCSEEEEC
T ss_pred ---CCCEEEEEEEecCCCeEEEEEeCChhhhhhccCCCCCCCCCCCccccccccCccCCCEEEeC
Confidence 99999999998656689999998753 578999999999865321 11234579999996
No 2
>2jcb_A 5-formyltetrahydrofolate cyclo-ligase family PROT; folate metabolism; HET: ADP; 1.6A {Bacillus anthracis}
Probab=99.94 E-value=3.6e-27 Score=185.62 Aligned_cols=126 Identities=22% Similarity=0.300 Sum_probs=113.2
Q ss_pred hHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCcCccCCCeEEEEeeCCCCCCCChHHHHHHHHhCCCCCCCCC
Q 031626 19 SIFQQKRILRSQVRKTLKSMDPSLRSHEDNAIQKIVLEAPWFKSSQRLCAYISCSALREVDTSKLLSQILQIPNADGDTK 98 (156)
Q Consensus 19 ~~~~~K~~lR~~~~~~R~~l~~~~~~~~s~~I~~~l~~~~~~~~a~~I~~Y~s~~~~~Evdt~~li~~l~~~~~~~~~~~ 98 (156)
-....|++||++++++|++++++++..+++.|+++|.+++.|.++++|++|+|++ +|+||.+|++++|+
T Consensus 8 ~~~~~K~~LR~~~~~~R~~ls~~~~~~~s~~i~~~l~~~~~~~~a~~I~~Y~~~~--~Evdt~~li~~~~~--------- 76 (200)
T 2jcb_A 8 HVREEKLRLRKQIIEHMNSLSKERYTTLSEQIVFSLYEQKEWAEAKTIGITLSME--NEVNTYPIIEKAWK--------- 76 (200)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTSHHHHHCSEEECCCCCT--TSCCCHHHHHHHHH---------
T ss_pred hhHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhChhhhcCCEEEEECCCC--CCCCHHHHHHHHHH---------
Confidence 4578899999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred CCcEEEEeeEeCCCCceEEEEeCCCCCCccCcCcccCCCCCCCCCCCCCCceeEEEEC
Q 031626 99 TRKKLYVPRVEDKNSHMRMFHISSIDDLIANSMNILEPAPVDADGNEREDGILLFIML 156 (156)
Q Consensus 99 ~gk~V~lP~v~~~~~~m~f~~~~~~~~L~~g~~GI~EP~~~~~~~~~~~~~ldliiv~ 156 (156)
.||+|+||++...++.|.|+.|++.++|++|+|||+||...... ......+|+|||+
T Consensus 77 ~gk~v~lP~~~~~~~~m~f~~~~~~~~L~~g~~GI~EP~~~~~~-~~~~~~iDlvlVP 133 (200)
T 2jcb_A 77 EGKRVVVPKCNKETRTMSFRQISNFDQLETVYMNLREPIPALTE-EVNADEIDLQIVP 133 (200)
T ss_dssp TTCEEEEEEEETTTTEEEEEEESSGGGEEEEETTEEEECGGGCE-ECCGGGCSEEECC
T ss_pred CCCEEEEeEEEcCCCcEEEEEeCCCcccccCCCCCCCCCCcccc-cCCccCCCEEEEC
Confidence 99999999997556789999999988999999999999853211 2345689999986
No 3
>1ydm_A Hypothetical protein YQGN; northeast structural genomics, SR44, X-RAY, PSI, protein structure initiative; 2.50A {Bacillus subtilis}
Probab=99.93 E-value=8.8e-27 Score=181.29 Aligned_cols=122 Identities=18% Similarity=0.255 Sum_probs=105.0
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCcCccCCCeEEEEeeCCCCCCCChHHHHHHHHhCCCCCCCCCCCcE
Q 031626 23 QKRILRSQVRKTLKSMDPSLRSHEDNAIQKIVLEAPWFKSSQRLCAYISCSALREVDTSKLLSQILQIPNADGDTKTRKK 102 (156)
Q Consensus 23 ~K~~lR~~~~~~R~~l~~~~~~~~s~~I~~~l~~~~~~~~a~~I~~Y~s~~~~~Evdt~~li~~l~~~~~~~~~~~~gk~ 102 (156)
.|++||++++++|++++++++..+++.|+++|.+++.+.++++|++|+|++ +|+||.+|++++|+ .||+
T Consensus 1 ~K~~lR~~~~~~r~~l~~~~~~~~s~~i~~~l~~~~~~~~a~~I~~y~~~~--~Evdt~~li~~~~~---------~gk~ 69 (187)
T 1ydm_A 1 MKSQLRKKTLEALSALSNEDILQKTERMYKYLFSLPEWQNAGTIAVTISRG--LEIPTRPVIEQAWE---------EGKQ 69 (187)
T ss_dssp ---CHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTSHHHHTCSEEECCCCCT--TSCCCHHHHHHHHH---------TTCE
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhCHHhhhCCEEEEECCCC--CCCCHHHHHHHHHH---------CCCE
Confidence 388999999999999999999999999999999999999999999999999 99999999999999 9999
Q ss_pred EEEeeEeCCCCceEEEEeCCCCCCccCcCcccCCCCCCCCCCCCCCceeEEEEC
Q 031626 103 LYVPRVEDKNSHMRMFHISSIDDLIANSMNILEPAPVDADGNEREDGILLFIML 156 (156)
Q Consensus 103 V~lP~v~~~~~~m~f~~~~~~~~L~~g~~GI~EP~~~~~~~~~~~~~ldliiv~ 156 (156)
|+||++...++.|.|+.|++.++|++|+|||+||...... ....+.+|+|||+
T Consensus 70 v~lP~~~~~~~~m~f~~~~~~~~L~~~~~gi~EP~~~~~~-~~~~~~iDlvivP 122 (187)
T 1ydm_A 70 VCIPKCHPDTKKMQFRTYQTDDQLETVYAGLLEPVIEKTK-EVNPSQIDLMIVP 122 (187)
T ss_dssp EEEECC---CCCCCEEECCCCTTHHHHHTTSCCCC--CCC-CCCGGGCCEEECC
T ss_pred EEEeEEecCCCcEEEEEeCCCCccCcCCCCCCCCCCcccc-cCCccCCCEEEeC
Confidence 9999996446789999999988999999999999864311 2345689999986
No 4
>1sou_A 5,10-methenyltetrahydrofolate synthetase; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; NMR {Aquifex aeolicus} SCOP: c.124.1.6
Probab=99.92 E-value=1.4e-25 Score=175.65 Aligned_cols=117 Identities=21% Similarity=0.353 Sum_probs=106.5
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCcCccCCCeEEEEeeCCCCCCCChHHHHHHHHhCCCCCCCCCCCcE
Q 031626 23 QKRILRSQVRKTLKSMDPSLRSHEDNAIQKIVLEAPWFKSSQRLCAYISCSALREVDTSKLLSQILQIPNADGDTKTRKK 102 (156)
Q Consensus 23 ~K~~lR~~~~~~R~~l~~~~~~~~s~~I~~~l~~~~~~~~a~~I~~Y~s~~~~~Evdt~~li~~l~~~~~~~~~~~~gk~ 102 (156)
.|++||++++++|++++++++..+++.|+++|.+++.+.++++|++|+|++ +||||.+|++.+|+ . |+
T Consensus 2 ~K~~lR~~~~~~r~~l~~~~~~~~s~~i~~~l~~~~~~~~a~~I~~y~~~~--~Evdt~~li~~~~~---------~-k~ 69 (194)
T 1sou_A 2 LKSELRKKVLHKRINLSEEERRRLSEKVISNLKSLPEFKKSKKVALYCPIK--GEVDLTPLFPEVLK---------E-KE 69 (194)
T ss_dssp CHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHCHHHHHCCEEEECCCCS--SCCCCGGGHHHHHH---------H-SE
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhChhhhcCCEEEEECCCC--CCCCHHHHHHHHHH---------c-CC
Confidence 389999999999999999999999999999999999999999999999999 99999999999999 9 99
Q ss_pred EEEeeEeCCCCceEEEEeCCCCCCccCcCcccCCCCCCCCCCCCCCceeEEEEC
Q 031626 103 LYVPRVEDKNSHMRMFHISSIDDLIANSMNILEPAPVDADGNEREDGILLFIML 156 (156)
Q Consensus 103 V~lP~v~~~~~~m~f~~~~~~~~L~~g~~GI~EP~~~~~~~~~~~~~ldliiv~ 156 (156)
|+||++ .++.|.|+.|++.++|++|+|||+||.. . . ......+|+|||+
T Consensus 70 v~lP~~--~~~~m~f~~~~~~~~L~~g~~GI~EP~~-~-~-~~~~~~iDlvlvP 118 (194)
T 1sou_A 70 LILPKV--EGNEISLYRVHSPACLGVGAFGIMEPVE-G-E-RVNPEDVDFIAVP 118 (194)
T ss_dssp EEEEEE--SSSSEEEEEESSSCCCEECSSSCEECCS-S-E-EECGGGCSEEEEC
T ss_pred EEEEEe--cCCeeEEEEECCCCccCCCCCCCCCCCc-c-c-cCCCCCCCEEEEC
Confidence 999999 3568999999999999999999999975 1 1 1234689999986
No 5
>1wkc_A HB8 TT1367 protein; structural genomics, riken structural genomics/proteomi initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.124.1.6
Probab=99.87 E-value=1.4e-22 Score=157.44 Aligned_cols=108 Identities=18% Similarity=0.273 Sum_probs=89.1
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCcCccCCCeEEEEeeCCCCCCCChHHHHHHHHhCCCCCCCCCCCcE
Q 031626 23 QKRILRSQVRKTLKSMDPSLRSHEDNAIQKIVLEAPWFKSSQRLCAYISCSALREVDTSKLLSQILQIPNADGDTKTRKK 102 (156)
Q Consensus 23 ~K~~lR~~~~~~R~~l~~~~~~~~s~~I~~~l~~~~~~~~a~~I~~Y~s~~~~~Evdt~~li~~l~~~~~~~~~~~~gk~ 102 (156)
.|++||++++++|+++++++ +++.|+++|.+++.+.++++|++|+|++ +||||.+|++ |+ . |+
T Consensus 2 ~K~~lR~~~~~~r~~l~~~~---~s~~i~~~l~~~~~~~~a~~I~~y~~~~--~Evdt~~li~--~~---------~-k~ 64 (184)
T 1wkc_A 2 TKAELRRRARAAWRRLDLKA---LSRAVGAALLPWLRERGFRHILLYHPLP--HELNLLPLME--AY---------P-AR 64 (184)
T ss_dssp CHHHHHHHHHHHHHTSCHHH---HHHHHHHHHHHHHHHHTCCEEECCCCCT--TCCCCTTHHH--HS---------C-CE
T ss_pred CHHHHHHHHHHHHHcCCHHH---HHHHHHHHHHhChhhhcCCEEEEECCCC--CCcCHHHHHH--hh---------c-CC
Confidence 38999999999999999987 7899999999999999999999999999 9999999999 78 8 99
Q ss_pred EEEeeEeCCCCceEEEEeCCCCCCccCcCcccCCCCCCCCCCCCCCceeEEEEC
Q 031626 103 LYVPRVEDKNSHMRMFHISSIDDLIANSMNILEPAPVDADGNEREDGILLFIML 156 (156)
Q Consensus 103 V~lP~v~~~~~~m~f~~~~~~~~L~~g~~GI~EP~~~~~~~~~~~~~ldliiv~ 156 (156)
|+||++.. + .|.|+.|+ +|++|+|||+|| ... ......+|+|||+
T Consensus 65 v~lP~~~~-~-~m~f~~~~---~L~~~~~gi~EP-~~~---~~~~~~iDlvlvP 109 (184)
T 1wkc_A 65 YYLPKVAG-K-GLTVHPFG---PLAPGPFGLLEP-TTP---PEDPRVLDLVVVP 109 (184)
T ss_dssp EEEEEEET-T-EEEEEESC---CBC-------CB-CSC---CBCGGGCSEEEEC
T ss_pred EEEeEEeC-C-ceEEEEec---ccCCCCCCCCCC-CCc---cCCCCCCCEEEEC
Confidence 99999863 4 89999998 899999999999 321 1234689999986
No 6
>1sbq_A H91_ORF164, 5,10-methenyltetrahydrofolate synthetase homolog; MTHFS, 5- formyltetrahydrofolate cyclo-ligase, structural genomics; 2.20A {Mycoplasma pneumoniae} SCOP: c.124.1.6 PDB: 1u3f_A* 1u3g_A*
Probab=99.82 E-value=9.9e-21 Score=147.83 Aligned_cols=90 Identities=17% Similarity=0.229 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCcCcc-CCCeEEEEeeCCCCCCCChHHHHHHHHhCCCCCCCCCCC
Q 031626 22 QQKRILRSQVRKTLKSMDPSLRSHEDNAIQKIVLEAPWFK-SSQRLCAYISCSALREVDTSKLLSQILQIPNADGDTKTR 100 (156)
Q Consensus 22 ~~K~~lR~~~~~~R~~l~~~~~~~~s~~I~~~l~~~~~~~-~a~~I~~Y~s~~~~~Evdt~~li~~l~~~~~~~~~~~~g 100 (156)
|.|++||++++++|++++++++..+++.|+++|++++.+. ++++|++|+|++ +||||.+|++++|+ .|
T Consensus 26 m~K~~LR~~~~~~R~~l~~~~~~~~s~~i~~~L~~~~~~~~~a~~I~~Y~~~~--~Evdt~~li~~~~~---------~g 94 (189)
T 1sbq_A 26 MDKNALRKQILQKRMALSTIEKSHLDQKINQKLVAFLTPKPCIKTIALYEPIK--NEVTFVDFFFEFLK---------IN 94 (189)
T ss_dssp CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHTTCTTCCEEECCCCCT--TSCCCCHHHHHHHH---------HT
T ss_pred ccHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhHHhHhhCCEEEEECCCC--CCCCHHHHHHHHHH---------cC
Confidence 4699999999999999999999999999999999999999 999999999999 99999999999999 99
Q ss_pred c-EEEEeeEeCCCCceEEEEeCCC
Q 031626 101 K-KLYVPRVEDKNSHMRMFHISSI 123 (156)
Q Consensus 101 k-~V~lP~v~~~~~~m~f~~~~~~ 123 (156)
| +|+||++.. ++.|.|+.|++.
T Consensus 95 k~~v~lP~~~~-~~~m~f~~~~~~ 117 (189)
T 1sbq_A 95 QIRAVYPKVIS-DTEIIFIDQETN 117 (189)
T ss_dssp TCEEEEEEECS-SSCEEEECTTCC
T ss_pred CCeEEEeEEcc-CCceEEEEeCCC
Confidence 9 999999963 467999999754
No 7
>3a4c_A DNA replication factor CDT1; alpha-beta structure, cell cycle, DNA- binding, nucleus, phosphoprotein, proto-oncogene, UBL conjugation; HET: DNA; 1.89A {Mus musculus} PDB: 2rqq_A*
Probab=13.55 E-value=1.2e+02 Score=20.91 Aligned_cols=52 Identities=10% Similarity=0.155 Sum_probs=36.4
Q ss_pred HHhcCCHHHHHHHHHHHHHHHHhCcCccCCCeEEEEeeCCCCCCCChHHHHHHHH
Q 031626 34 TLKSMDPSLRSHEDNAIQKIVLEAPWFKSSQRLCAYISCSALREVDTSKLLSQIL 88 (156)
Q Consensus 34 ~R~~l~~~~~~~~s~~I~~~l~~~~~~~~a~~I~~Y~s~~~~~Evdt~~li~~l~ 88 (156)
.|..+++.+..+.-+.+++-+=++..++..+ =..|+-+. .+.|+..+++.+-
T Consensus 47 yr~~ls~~EmE~hl~lL~ellPdWls~~~vR-~~~ylKl~--k~~dl~~i~~rLe 98 (106)
T 3a4c_A 47 CQTALSPGEMEKHLVLLAELLPDWLSLHRIR-TDTYVKLD--KAVDLAGLTARLA 98 (106)
T ss_dssp SCCSCCHHHHHHHHHHHHHHCTTTEEEEEET-TEEEEEEC--TTSCHHHHHHHHH
T ss_pred hhccCCHHHHHHHHHHHHHhCcchheeeeee-ccceeeee--hhhhHHHHHHHHH
Confidence 3566788888877777776553333333322 36799999 9999999999864
No 8
>2y39_A Nickel and cobalt resistance protein CNRR; metal binding protein; 1.41A {Cupriavidus metallidurans} PDB: 2y3b_A 2y3d_A 2y3g_A* 2y3h_A 3epv_A*
Probab=12.64 E-value=3.4e+02 Score=18.84 Aligned_cols=28 Identities=14% Similarity=0.184 Sum_probs=24.6
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHh
Q 031626 29 SQVRKTLKSMDPSLRSHEDNAIQKIVLE 56 (156)
Q Consensus 29 ~~~~~~R~~l~~~~~~~~s~~I~~~l~~ 56 (156)
..+++.|.-|+|+++....+.+...|..
T Consensus 88 ~HvfeMR~VLtPeQ~~~fd~~vv~alt~ 115 (118)
T 2y39_A 88 VHVFEMRAGLKPEHRPAYDRVLIDALRR 115 (118)
T ss_dssp HHHHHHHHHSCGGGHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHhcc
Confidence 4578899999999999999999988865
No 9
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A
Probab=12.19 E-value=3.6e+02 Score=21.56 Aligned_cols=56 Identities=11% Similarity=0.061 Sum_probs=41.0
Q ss_pred cCCHHHHHHHHHHHHHHHHhCcCccCCCeEEEEeeCCCCCCCChHHHHHHHHhCCCCCCCCCCCcEEEEeeE
Q 031626 37 SMDPSLRSHEDNAIQKIVLEAPWFKSSQRLCAYISCSALREVDTSKLLSQILQIPNADGDTKTRKKLYVPRV 108 (156)
Q Consensus 37 ~l~~~~~~~~s~~I~~~l~~~~~~~~a~~I~~Y~s~~~~~Evdt~~li~~l~~~~~~~~~~~~gk~V~lP~v 108 (156)
.++=.+..+.+..++..|.+.- . +..+|+++++-. ++.-.++-.++. .|. ++||+-
T Consensus 58 ~~Ty~el~~~~~~lA~~L~~~g-~-~gd~V~i~~~n~----~e~~~~~lA~~~---------~G~-v~vpl~ 113 (480)
T 3t5a_A 58 TLTWSQLYRRTLNVAQELSRCG-S-TGDRVVISAPQG----LEYVVAFLGALQ---------AGR-IAVPLS 113 (480)
T ss_dssp EEEHHHHHHHHHHHHHHHTTSS-C-TTCEEEEECCSS----HHHHHHHHHHHH---------TTC-EEEEEC
T ss_pred EEcHHHHHHHHHHHHHHHHhcC-C-CCCEEEEEcCCc----HHHHHHHHHHHH---------hCc-EEEeeC
Confidence 4566778888899999998765 3 678999988765 455555666777 664 788874
No 10
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=12.06 E-value=3.2e+02 Score=22.16 Aligned_cols=53 Identities=15% Similarity=0.043 Sum_probs=37.3
Q ss_pred cCCHHHHHHHHHHHHHHHHhCcCccCCCeEEEEeeCCCCCCCChHHHHHHHHhCCCCCCCCCCCcEEEEee
Q 031626 37 SMDPSLRSHEDNAIQKIVLEAPWFKSSQRLCAYISCSALREVDTSKLLSQILQIPNADGDTKTRKKLYVPR 107 (156)
Q Consensus 37 ~l~~~~~~~~s~~I~~~l~~~~~~~~a~~I~~Y~s~~~~~Evdt~~li~~l~~~~~~~~~~~~gk~V~lP~ 107 (156)
.++=.+....+..++..|.+. +..+|++|++-. ++.-..+-.++. .|. +++|.
T Consensus 26 ~~Ty~eL~~~~~~lA~~L~~~----~gd~V~i~~~n~----~e~~~~~lA~~~---------~Ga-v~vpl 78 (501)
T 3ipl_A 26 SYTYQNLYCEASLLAKRLKAY----QQSRVGLYIDNS----IQSIILIHACWL---------ANI-EIAMI 78 (501)
T ss_dssp EEEHHHHHHHHHHHHHHHHTT----CCSEEEEECCSS----HHHHHHHHHHHH---------TTC-EEEEC
T ss_pred EEEHHHHHHHHHHHHHHHHHc----CCCEEEEEcCCC----HHHHHHHHHHHH---------cCC-EEEec
Confidence 345567777888888888775 568999998875 445555556666 664 77775
Done!