Query 031631
Match_columns 156
No_of_seqs 78 out of 80
Neff 2.6
Searched_HMMs 13730
Date Mon Mar 25 04:31:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031631.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/031631hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2idob1 a.237.1.1 (B:2-76) Hom 37.6 6 0.00043 26.5 1.4 20 98-117 45-64 (75)
2 d1mv8a2 c.2.1.6 (A:1-202) GDP- 35.1 26 0.0019 24.2 4.7 45 100-144 129-173 (202)
3 d1d6ta_ d.14.1.2 (A:) RNase P 35.1 26 0.0019 22.8 4.4 57 85-141 45-103 (117)
4 d1muma_ c.1.12.7 (A:) 2-methyl 34.4 16 0.0012 28.0 3.6 61 85-150 151-211 (289)
5 d2ae9a1 a.237.1.1 (A:1-76) The 30.6 12 0.0009 24.9 2.1 18 99-116 46-63 (76)
6 d1chma1 c.55.2.1 (A:2-156) Cre 28.1 8.9 0.00065 25.3 1.0 50 105-154 23-75 (155)
7 d1w9ha1 c.55.3.10 (A:93-408) H 28.1 58 0.0042 23.8 5.8 42 99-140 132-180 (316)
8 d1u0ua2 c.95.1.2 (A:238-393) D 23.1 32 0.0023 23.8 3.2 44 83-127 28-71 (156)
9 d2oo2a1 a.8.11.1 (A:1-75) Hypo 23.0 18 0.0013 23.7 1.8 15 101-115 1-15 (75)
10 d1ee0a2 c.95.1.2 (A:236-395) P 22.4 20 0.0015 25.1 2.1 45 82-127 31-75 (160)
11 d1ydla1 d.295.1.1 (A:6-71) Gen 20.1 23 0.0017 22.5 1.8 19 98-116 41-59 (66)
No 1
>d2idob1 a.237.1.1 (B:2-76) Homolog of theta (HOT) {Bacteriophage P1 [TaxId: 10678]}
Probab=37.59 E-value=6 Score=26.52 Aligned_cols=20 Identities=35% Similarity=0.599 Sum_probs=17.0
Q ss_pred cchhHHHHHHHHHhhhccCc
Q 031631 98 EEHFQELLFERLRNYGERSK 117 (156)
Q Consensus 98 EEplEEVLrER~R~Y~E~~K 117 (156)
-|+|.+-++||+.||....+
T Consensus 45 Pe~LR~yF~eRL~~yR~~s~ 64 (75)
T d2idob1 45 PENLRTYFMERLRHYRQLSL 64 (75)
T ss_dssp CGGGHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHHHh
Confidence 38999999999999987643
No 2
>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=35.09 E-value=26 Score=24.15 Aligned_cols=45 Identities=16% Similarity=0.251 Sum_probs=30.7
Q ss_pred hhHHHHHHHHHhhhccCceecEEEeeCccccccChhhHhhcCCCc
Q 031631 100 HFQELLFERLRNYGERSKEQDFWLVIEPKFLDKFPNITKRLRRPA 144 (156)
Q Consensus 100 plEEVLrER~R~Y~E~~KeiDFWLV~~PaFLeefp~ik~klpqPa 144 (156)
--++++++.++.........||.++-+|+|+.+=..++.-...|-
T Consensus 129 tt~~~~~~~l~~~~~~~~~~~~~~~~~PE~~~~G~a~~d~~~~~~ 173 (202)
T d1mv8a2 129 TVNNVVIPLIEDCSGKKAGVDFGVGTNPEFLRESTAIKDYDFPPM 173 (202)
T ss_dssp HHHHTHHHHHHHHHSCCBTTTBEEEECCCCCCTTSHHHHHHSCSC
T ss_pred chhhhhhhhhhccccccccccccchhhhhhhcccchhhhhcCCCe
Confidence 345555666666666677889999999999986445554444443
No 3
>d1d6ta_ d.14.1.2 (A:) RNase P protein {Staphylococcus aureus [TaxId: 1280]}
Probab=35.05 E-value=26 Score=22.75 Aligned_cols=57 Identities=11% Similarity=0.072 Sum_probs=37.2
Q ss_pred EEEeecccccCcc-cchhHHHHHHHHHhhhccCceecEEEeeCccccc-cChhhHhhcC
Q 031631 85 YFVVANAKFMLDE-EEHFQELLFERLRNYGERSKEQDFWLVIEPKFLD-KFPNITKRLR 141 (156)
Q Consensus 85 YfvvAS~kFLl~e-EEplEEVLrER~R~Y~E~~KeiDFWLV~~PaFLe-efp~ik~klp 141 (156)
.-+++|.++=--. ---+--.|||=.|.....-..-|+=++..|..++ .+.++.+.+.
T Consensus 45 ~G~~vsKKvg~AV~RNriKR~lRe~~R~~~~~~~~~d~Vvi~~~~~~~~~~~el~~~l~ 103 (117)
T d1d6ta_ 45 LGISVSKKLGNAVLRNKIKRAIRENFKVHKSHILAKDIIVIARQPAKDMTTLQIQNSLE 103 (117)
T ss_dssp EEEECCSSSCSTTHHHHHHHHHHHHHHHGGGTCCSSCEEEEECSGGGGCCTTHHHHHHT
T ss_pred EEEEEeccCcchHHHHHHHHHHHHHHHhhhccCCCceEEEEEccccccCCHHHHHHHHH
Confidence 3445566642100 1345566777777666665678999999999988 6888876553
No 4
>d1muma_ c.1.12.7 (A:) 2-methylisocitrate lyase {Escherichia coli [TaxId: 562]}
Probab=34.38 E-value=16 Score=27.98 Aligned_cols=61 Identities=13% Similarity=0.239 Sum_probs=46.4
Q ss_pred EEEeecccccCcccchhHHHHHHHHHhhhccCceecEEEeeCccccccChhhHhhcCCCcEEEEec
Q 031631 85 YFVVANAKFMLDEEEHFQELLFERLRNYGERSKEQDFWLVIEPKFLDKFPNITKRLRRPAVALVST 150 (156)
Q Consensus 85 YfvvAS~kFLl~eEEplEEVLrER~R~Y~E~~KeiDFWLV~~PaFLeefp~ik~klpqPaaAIVST 150 (156)
.+|+|..+-+. .+-++|.|+ |.+-|.|-+ -|-|++..+.=.+++..+.+.++-|..+.+..
T Consensus 151 ~~IiARTDa~~--~~g~~eAi~-R~~aY~eAG--AD~vf~~~~~~~~~~~~~~~~~~~Pl~~~~~~ 211 (289)
T d1muma_ 151 FVIMARTDALA--VEGLDAAIE-RAQAYVEAG--AEMLFPEAITELAMYRQFADAVQVPILANITE 211 (289)
T ss_dssp SEEEEEECCHH--HHCHHHHHH-HHHHHHHTT--CSEEEETTCCCHHHHHHHHHHHCSCBEEECCS
T ss_pred hhheecccccc--ccCHHHHHH-HHHHhhhcC--CcEEEecCCCCHHHHHHHHHhcCCCEEEeecC
Confidence 45778777553 357999887 999999988 57788876655557888889999998876543
No 5
>d2ae9a1 a.237.1.1 (A:1-76) Theta subunit of DNA polymerase III {Escherichia coli [TaxId: 562]}
Probab=30.59 E-value=12 Score=24.93 Aligned_cols=18 Identities=33% Similarity=0.309 Sum_probs=16.1
Q ss_pred chhHHHHHHHHHhhhccC
Q 031631 99 EHFQELLFERLRNYGERS 116 (156)
Q Consensus 99 EplEEVLrER~R~Y~E~~ 116 (156)
|+|.+-++||+.||....
T Consensus 46 e~LR~yF~eRL~~yR~~s 63 (76)
T d2ae9a1 46 EHLRSWFRERLIAHRLAS 63 (76)
T ss_dssp GGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 899999999999998653
No 6
>d1chma1 c.55.2.1 (A:2-156) Creatinase {Pseudomonas putida [TaxId: 303]}
Probab=28.11 E-value=8.9 Score=25.31 Aligned_cols=50 Identities=10% Similarity=0.144 Sum_probs=35.5
Q ss_pred HHHHHHhhhcc--CceecEEEeeCccccccChhhHh-hcCCCcEEEEecCCCC
Q 031631 105 LFERLRNYGER--SKEQDFWLVIEPKFLDKFPNITK-RLRRPAVALVSTNGPW 154 (156)
Q Consensus 105 LrER~R~Y~E~--~KeiDFWLV~~PaFLeefp~ik~-klpqPaaAIVSTd~~F 154 (156)
++.|++..++. ++.+|--||..|+=+-.|-+..- ...+|.+.+|+.|..+
T Consensus 23 ~~~Rl~klr~~m~~~giDalli~~~~ni~YlTGf~~~~~~r~~~l~i~~~~~~ 75 (155)
T d1chma1 23 YANRQARLRAHLAAENIDAAIFTSYHNINYYSDFLYCSFGRPYALVVTEDDVI 75 (155)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEECSHHHHHHHHSCCCCCTTCCCEEEECSSCEE
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeccccceeecCccccCccCceEEEecCCCce
Confidence 46666665554 55799999999997776555542 2467889999988754
No 7
>d1w9ha1 c.55.3.10 (A:93-408) Hypothetical protein AF1318 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=28.08 E-value=58 Score=23.82 Aligned_cols=42 Identities=7% Similarity=0.091 Sum_probs=25.1
Q ss_pred chhHHHHHHHHHhhhccCce----ecEEE--eeCccccc-cChhhHhhc
Q 031631 99 EHFQELLFERLRNYGERSKE----QDFWL--VIEPKFLD-KFPNITKRL 140 (156)
Q Consensus 99 EplEEVLrER~R~Y~E~~Ke----iDFWL--V~~PaFLe-efp~ik~kl 140 (156)
+.|++.+++.+..|.++++. +-+-. +....+.+ |+.++++.+
T Consensus 132 ~~l~~~~~~~l~~~~~~~~~~~p~~Ii~~r~g~~~~~~~~e~~~~~~ai 180 (316)
T d1w9ha1 132 TYLKSTIKKVVYGFKKSNPDWDVEKLTLHVSGKRPKMKDGETKILKETV 180 (316)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCCCCEEEEEEESSCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCcceEEEECCcccchHHHHHHHHHHHH
Confidence 57899999999888766543 22222 13444555 556666444
No 8
>d1u0ua2 c.95.1.2 (A:238-393) Dihydropinosylvin synthase {Scots pine (Pinus sylvestris) [TaxId: 3349]}
Probab=23.07 E-value=32 Score=23.76 Aligned_cols=44 Identities=16% Similarity=0.229 Sum_probs=32.4
Q ss_pred eEEEEeecccccCcccchhHHHHHHHHHhhhccCceecEEEeeCc
Q 031631 83 KYYFVVANAKFMLDEEEHFQELLFERLRNYGERSKEQDFWLVIEP 127 (156)
Q Consensus 83 tYYfvvAS~kFLl~eEEplEEVLrER~R~Y~E~~KeiDFWLV~~P 127 (156)
-|.+.+...=|-+ -.+.+.++++|=++...-...+||+|++=+.
T Consensus 28 G~~~~l~~~Vp~~-v~~~i~~~~~~~l~~~~~~~~did~~i~Hqg 71 (156)
T d1u0ua2 28 GLTFQLKGAVPDL-ISANIENCMVEAFSQFKISDWNKLFWVVHPG 71 (156)
T ss_dssp EEEEEECTTHHHH-HHHHHHHHHHHHHGGGTCCCGGGSEEEECCS
T ss_pred cEEEEEcchhHHH-HHHHHHHHHHHHHHHcCCChhhCceEeecCC
Confidence 4666665555554 4578888888877777778889999998754
No 9
>d2oo2a1 a.8.11.1 (A:1-75) Hypothetical protein AF1782 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=23.02 E-value=18 Score=23.67 Aligned_cols=15 Identities=27% Similarity=0.255 Sum_probs=12.8
Q ss_pred hHHHHHHHHHhhhcc
Q 031631 101 FQELLFERLRNYGER 115 (156)
Q Consensus 101 lEEVLrER~R~Y~E~ 115 (156)
+||.|+||+..|-+.
T Consensus 1 ~e~el~eriekYi~~ 15 (75)
T d2oo2a1 1 LEEELRRETLKWLER 15 (75)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHH
Confidence 689999999999765
No 10
>d1ee0a2 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcone synthase 2) {Gerbera hybrid cultivar [TaxId: 18101]}
Probab=22.38 E-value=20 Score=25.10 Aligned_cols=45 Identities=13% Similarity=0.204 Sum_probs=32.5
Q ss_pred ceEEEEeecccccCcccchhHHHHHHHHHhhhccCceecEEEeeCc
Q 031631 82 NKYYFVVANAKFMLDEEEHFQELLFERLRNYGERSKEQDFWLVIEP 127 (156)
Q Consensus 82 ttYYfvvAS~kFLl~eEEplEEVLrER~R~Y~E~~KeiDFWLV~~P 127 (156)
.-|++.+..+-|-+ -...+.+++++=++..+-...+||||++-+.
T Consensus 31 ~G~~~~l~r~Vp~~-~~~~v~~~v~~~l~~~gl~~~di~~~v~Hqg 75 (160)
T d1ee0a2 31 GGLTFQLHRDVPLM-VAKNIENAAEKALSPLGITDWNSVFWMVHPG 75 (160)
T ss_dssp TEECCEECTTHHHH-HHHHHHHHHHHHHGGGTCCCGGGSEEEECCS
T ss_pred CceEEeeCchhHHH-HHHHHHHHHHHHHhhccCCccccceEeecCC
Confidence 45666665555544 4578888888877777777888999998754
No 11
>d1ydla1 d.295.1.1 (A:6-71) General transcription factor IIH polypeptide 5, TFB5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.12 E-value=23 Score=22.46 Aligned_cols=19 Identities=16% Similarity=0.246 Sum_probs=16.5
Q ss_pred cchhHHHHHHHHHhhhccC
Q 031631 98 EEHFQELLFERLRNYGERS 116 (156)
Q Consensus 98 EEplEEVLrER~R~Y~E~~ 116 (156)
.+...+.||+|+..+.++|
T Consensus 41 ~~~~~~~lk~~l~~l~d~n 59 (66)
T d1ydla1 41 IAELVNVLQERVGELMDQN 59 (66)
T ss_dssp CTTHHHHHHHHHHHTSCCC
T ss_pred cHHHHHHHHHHHHHHHHhc
Confidence 4788899999999988876
Done!