BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031632
(156 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SSB8|CX5B2_ARATH Cytochrome c oxidase subunit 5b-2, mitochondrial OS=Arabidopsis
thaliana GN=COX5B-2 PE=2 SV=1
Length = 171
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 95/152 (62%), Positives = 113/152 (74%), Gaps = 8/152 (5%)
Query: 1 MWRRICSSQLKAQAL--ALAQYSCRSAPVNPSIASRSLISRPL------FASRHFSADSG 52
MWRRI SS LK+ + + A SCR A V + S S + + F+ SA +
Sbjct: 1 MWRRIVSSHLKSISAVGSCAAPSCRHAVVESTHLSLSTRASSIPAYSSIFSRLIGSAAAD 60
Query: 53 TSVKKRVEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVG 112
T+VKKRVEDV P+ATGHE+EEL+AELEG+ + +ID+P GPFGTK+APAVVKSYYD RIVG
Sbjct: 61 TAVKKRVEDVMPIATGHEKEELQAELEGRKLDDIDFPEGPFGTKEAPAVVKSYYDMRIVG 120
Query: 113 CPGGEGEDEHDVVWFWLEKGKPHECPVCSQYF 144
CPGGEGEDEHDVVWFWLEKGK ECPVC+QYF
Sbjct: 121 CPGGEGEDEHDVVWFWLEKGKSFECPVCTQYF 152
>sp|Q9LW15|CX5B1_ARATH Cytochrome c oxidase subunit 5b-1, mitochondrial OS=Arabidopsis
thaliana GN=COX5B-1 PE=2 SV=1
Length = 176
Score = 168 bits (425), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/153 (64%), Positives = 114/153 (74%), Gaps = 9/153 (5%)
Query: 1 MWRRICSSQLKAQALALAQYSCR------SAPVNPSIAS-RSLISRPLFA-SRHFSADS- 51
MWRRI SSQLK A + S R + PV +A+ RS IS F R FS+DS
Sbjct: 1 MWRRIVSSQLKTLAADVVAASPRRSIAATTRPVGFYLAANRSAISASSFVIPRRFSSDSV 60
Query: 52 GTSVKKRVEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIV 111
T K+VEDV P+ATGHE+EELEAELEG+ + +ID+P GPFGTK+APA+VKSYYDKRIV
Sbjct: 61 ETPATKKVEDVMPIATGHEKEELEAELEGRRLDDIDFPEGPFGTKEAPAIVKSYYDKRIV 120
Query: 112 GCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYF 144
GCPGGEGEDEHDVVWFWLEKGK ECPVC+QYF
Sbjct: 121 GCPGGEGEDEHDVVWFWLEKGKSFECPVCTQYF 153
>sp|Q9SSS5|CX5BL_ARATH Putative cytochrome c oxidase subunit 5b-like OS=Arabidopsis
thaliana GN=At1g52710 PE=2 SV=2
Length = 90
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 49/71 (69%), Positives = 60/71 (84%)
Query: 74 LEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGK 133
L+ E G+ +L+ID+P PFGTK++PAVV+SY+DKR +GC GGEGED HDVVWFWL+KGK
Sbjct: 4 LDKEYSGRRLLDIDHPESPFGTKESPAVVQSYFDKRNIGCRGGEGEDGHDVVWFWLDKGK 63
Query: 134 PHECPVCSQYF 144
ECPVCSQYF
Sbjct: 64 SFECPVCSQYF 74
>sp|P10606|COX5B_HUMAN Cytochrome c oxidase subunit 5B, mitochondrial OS=Homo sapiens
GN=COX5B PE=1 SV=2
Length = 129
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 62/116 (53%), Gaps = 7/116 (6%)
Query: 30 SIASRSLISR-PLFASRHFSADSGTSVKKRVEDVNPVATGHEREELEAELEGKNILEIDY 88
++A+++L +R P A+ S SG V E ATG ERE + A +G + +
Sbjct: 11 TLAAQALRARGPSGAAAMRSMASGGGVPTDEEQ----ATGLEREIMLAAKKGLDPYNVLA 66
Query: 89 PTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYF 144
P G GT++ P +V S +KRIVGC ED VVWFWL KG+ CP C ++
Sbjct: 67 PKGASGTREDPNLVPSISNKRIVGCIC--EEDNTSVVWFWLHKGEAQRCPRCGAHY 120
>sp|P00428|COX5B_BOVIN Cytochrome c oxidase subunit 5B, mitochondrial OS=Bos taurus
GN=COX5B PE=1 SV=2
Length = 129
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 61/116 (52%), Gaps = 7/116 (6%)
Query: 30 SIASRSLISR-PLFASRHFSADSGTSVKKRVEDVNPVATGHEREELEAELEGKNILEIDY 88
++AS++L +R P S S SG V E ATG ERE + A +G++ I
Sbjct: 11 ALASQALRARGPNGVSVVRSMASGGGVPTDEEQ----ATGLEREVMLAARKGQDPYNILA 66
Query: 89 PTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYF 144
P GTK+ P +V S +KRIVGC ED V+WFWL KG+ CP C ++
Sbjct: 67 PKATSGTKEDPNLVPSITNKRIVGCIC--EEDNSTVIWFWLHKGEAQRCPSCGTHY 120
>sp|Q710D6|COX5B_VULVU Cytochrome c oxidase subunit 5B, mitochondrial OS=Vulpes vulpes
GN=COX5B PE=1 SV=1
Length = 128
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 55/115 (47%), Gaps = 2/115 (1%)
Query: 30 SIASRSLISRPLFASRHFSADSGTSVKKRVEDVNPVATGHEREELEAELEGKNILEIDYP 89
++ R L + AS S K V + ATG ERE + A +G + I P
Sbjct: 7 ALEVRELKMQTPTASCVLSTQRANFAKGGVPTDDEQATGLEREVMMAARKGLDPYNILAP 66
Query: 90 TGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYF 144
GTK+ P +V S +KRIVGC ED V+WFWL KG+ CP C ++
Sbjct: 67 KAAAGTKEDPNLVPSITNKRIVGCIC--EEDNSTVIWFWLHKGEAQRCPSCGTHY 119
>sp|Q5REG2|COX5B_PONAB Cytochrome c oxidase subunit 5B, mitochondrial OS=Pongo abelii
GN=COX5B PE=2 SV=1
Length = 129
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 66 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 125
ATG ERE + A +G + + P G GT++ P +V S +KRIVGC ED VV
Sbjct: 44 ATGLEREIMLAAKKGLDPYNVLAPKGASGTREDPNLVPSISNKRIVGCIC--EEDNTSVV 101
Query: 126 WFWLEKGKPHECPVCSQYF 144
WFWL KG+ CP C ++
Sbjct: 102 WFWLHKGEAQRCPRCGAHY 120
>sp|Q5S3G4|COX5B_PIG Cytochrome c oxidase subunit 5B, mitochondrial OS=Sus scrofa
GN=COX5B PE=2 SV=1
Length = 129
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 66 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 125
ATG ERE + A +G + I P GTK+ P +V S +KRIVGC ED V+
Sbjct: 44 ATGLEREVMMAARKGLDPYNILAPKAASGTKEDPNLVPSITNKRIVGCIC--EEDNSTVI 101
Query: 126 WFWLEKGKPHECPVCSQYF 144
WFW+ KG+ CP C ++
Sbjct: 102 WFWVHKGETQRCPSCGTHY 120
>sp|P19536|COX5B_MOUSE Cytochrome c oxidase subunit 5B, mitochondrial OS=Mus musculus
GN=Cox5b PE=1 SV=1
Length = 128
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 66 ATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVV 125
ATG ERE + A +G + + P GTK+ P +V S +KRIVGC ED V+
Sbjct: 43 ATGLEREIMIAAQKGLDPYNMLPPKAASGTKEDPNLVPSISNKRIVGCIC--EEDNCTVI 100
Query: 126 WFWLEKGKPHECPVCSQYF 144
WFWL KG+ CP C ++
Sbjct: 101 WFWLHKGESQRCPNCGTHY 119
>sp|P12075|COX5B_RAT Cytochrome c oxidase subunit 5B, mitochondrial OS=Rattus norvegicus
GN=Cox5b PE=1 SV=2
Length = 129
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 55/113 (48%), Gaps = 8/113 (7%)
Query: 32 ASRSLISRPLFASRHFSADSGTSVKKRVEDVNPVATGHEREELEAELEGKNILEIDYPTG 91
A R+ R + A+R ++ G + ATG ERE + A G + + P
Sbjct: 16 ALRAHGPRGVAATRSMASGGGVPTDEEQ------ATGLEREIMIAAQRGLDPYNMLPPKA 69
Query: 92 PFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYF 144
GTK+ P +V S +KRIVGC ED V+WFWL +G+ CP C ++
Sbjct: 70 ASGTKEDPNLVPSVSNKRIVGCIC--EEDNCTVIWFWLHQGESQRCPNCGTHY 120
>sp|P29505|COX5_DICDI Cytochrome c oxidase subunit 5 OS=Dictyostelium discoideum GN=cxeA
PE=1 SV=3
Length = 120
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 90 TGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYF 144
TG FGT +P +V+S + RIV C GG+GE EHD+++ + + KP C C Q F
Sbjct: 53 TGAFGTLKSPVIVESIFHSRIVACEGGDGE-EHDILFHTVAEKKPTICLDCGQVF 106
>sp|P06809|COX4_NEUCR Cytochrome c oxidase subunit 4, mitochondrial OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=cox-4 PE=3 SV=2
Length = 186
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 66 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 124
ATG ER E+ ++EG ++ ++ GT + P V+S D++ GC G D H+V
Sbjct: 70 ATGLERLEILGKMEGVDVFDMKPLDASRRGTMENPISVRSAGDEQYAGCTGFPA-DSHNV 128
Query: 125 VWFWLEKGKPHE-CPVCSQYF 144
+W + + +P E CP C +
Sbjct: 129 IWLTMTRERPVERCPECGNVY 149
>sp|P79010|COX4_SCHPO Cytochrome c oxidase subunit 4, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=cox4 PE=2 SV=1
Length = 164
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 66 ATGHEREELEAELEGKNILEID-YPTGPFGTKDAPAVVKSYYDKRIVGCPGGEGEDEHDV 124
ATG ER EL +EL G++ ++ GT P +V S R +GC G H++
Sbjct: 72 ATGLERYELLSELSGRDAFDMKPLDASRKGTLTDPIMVTSLDPYRHIGCTGSP-SGSHNL 130
Query: 125 VWFWLEKGKPHECPVCSQYF 144
+W + K K CP C +
Sbjct: 131 IWMTVYKDKLRRCPECGSVY 150
>sp|P80499|COX5B_SOLTU Cytochrome c oxidase subunit 5B, mitochondrial (Fragment)
OS=Solanum tuberosum PE=1 SV=1
Length = 28
Score = 38.1 bits (87), Expect = 0.025, Method: Composition-based stats.
Identities = 16/24 (66%), Positives = 20/24 (83%)
Query: 54 SVKKRVEDVNPVATGHEREELEAE 77
+V K+VEDV P+ATGHERE L A+
Sbjct: 5 NVVKKVEDVMPIATGHEREXLXAQ 28
>sp|P04037|COX4_YEAST Cytochrome c oxidase subunit 4, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=COX4 PE=1
SV=1
Length = 155
Score = 37.0 bits (84), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 10/66 (15%)
Query: 67 TGHEREELEAELEGKNILEIDYPTGPF-----GTKDAPAVVKSYYDKRIVGCPGGEGEDE 121
TG R EL +LEG ++ + T P GT P +++SY D R VGC G
Sbjct: 64 TGLARLELLGKLEGIDVFD----TKPLDSSRKGTMKDPIIIESYDDYRYVGCTGSPA-GS 118
Query: 122 HDVVWF 127
H ++W
Sbjct: 119 HTIMWL 124
>sp|A3QF43|ASTB_SHELP N-succinylarginine dihydrolase OS=Shewanella loihica (strain ATCC
BAA-1088 / PV-4) GN=astB PE=3 SV=1
Length = 445
Score = 33.5 bits (75), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 65 VATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSY-YDKRIVGCPGGE 117
V T + E++ + GK + I+ PT G +DA VKSY ++ +IV P GE
Sbjct: 270 VDTQKKLAEIQDKFNGKELHFIEVPTAKVGIQDA---VKSYLFNTQIVTLPNGE 320
>sp|A7MB35|ODPA_BOVIN Pyruvate dehydrogenase E1 component subunit alpha, somatic form,
mitochondrial OS=Bos taurus GN=PDHA1 PE=2 SV=1
Length = 390
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Query: 38 SRPLFASRHFSADSGTSVKK----RVEDVNPVATGHEREE 73
SR L ASRHF+ D+ +KK R+E+ PV T RE+
Sbjct: 21 SRVLVASRHFANDATFEIKKCDLHRLEEGPPVTTVLTRED 60
>sp|Q19724|NDUS6_CAEEL Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 6,
mitochondrial OS=Caenorhabditis elegans GN=nduf-6 PE=3
SV=1
Length = 140
Score = 30.8 bits (68), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 20/44 (45%)
Query: 107 DKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVVSGGS 150
DKR+V C GG H V+ L+K H C C F S +
Sbjct: 85 DKRVVFCDGGHPALGHPKVYINLDKPGVHACGYCGNRFYNSHAT 128
>sp|Q0BN96|GLMU_FRATO Bifunctional protein GlmU OS=Francisella tularensis subsp.
holarctica (strain OSU18) GN=glmU PE=3 SV=1
Length = 455
Score = 30.4 bits (67), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Query: 59 VEDVNP----VATGHEREELEAELEGKNILEIDYPTGPFGTKDA 98
VE +NP V TGH +E++E L+G+NI + Y GT A
Sbjct: 40 VEKLNPDNIVVVTGHLKEQVEDALQGRNITFV-YQQQQLGTGHA 82
>sp|A4IZM7|GLMU_FRATW Bifunctional protein GlmU OS=Francisella tularensis subsp.
tularensis (strain WY96-3418) GN=glmU PE=3 SV=1
Length = 455
Score = 30.4 bits (67), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Query: 59 VEDVNP----VATGHEREELEAELEGKNILEIDYPTGPFGTKDA 98
VE +NP V TGH +E++E L+G+NI + Y GT A
Sbjct: 40 VEKLNPDNIVVVTGHLKEQVEDALQGRNITFV-YQQQQLGTGHA 82
>sp|Q5NHR0|GLMU_FRATT Bifunctional protein GlmU OS=Francisella tularensis subsp.
tularensis (strain SCHU S4 / Schu 4) GN=glmU PE=3 SV=1
Length = 455
Score = 30.4 bits (67), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Query: 59 VEDVNP----VATGHEREELEAELEGKNILEIDYPTGPFGTKDA 98
VE +NP V TGH +E++E L+G+NI + Y GT A
Sbjct: 40 VEKLNPDNIVVVTGHLKEQVEDALQGRNITFV-YQQQQLGTGHA 82
>sp|B2SFB5|GLMU_FRATM Bifunctional protein GlmU OS=Francisella tularensis subsp.
mediasiatica (strain FSC147) GN=glmU PE=3 SV=1
Length = 455
Score = 30.4 bits (67), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Query: 59 VEDVNP----VATGHEREELEAELEGKNILEIDYPTGPFGTKDA 98
VE +NP V TGH +E++E L+G+NI + Y GT A
Sbjct: 40 VEKLNPDNIVVVTGHLKEQVEDALQGRNITFV-YQQQQLGTGHA 82
>sp|Q2A4X7|GLMU_FRATH Bifunctional protein GlmU OS=Francisella tularensis subsp.
holarctica (strain LVS) GN=glmU PE=3 SV=1
Length = 455
Score = 30.4 bits (67), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Query: 59 VEDVNP----VATGHEREELEAELEGKNILEIDYPTGPFGTKDA 98
VE +NP V TGH +E++E L+G+NI + Y GT A
Sbjct: 40 VEKLNPDNIVVVTGHLKEQVEDALQGRNITFV-YQQQQLGTGHA 82
>sp|A7NAF3|GLMU_FRATF Bifunctional protein GlmU OS=Francisella tularensis subsp.
holarctica (strain FTNF002-00 / FTA) GN=glmU PE=3 SV=1
Length = 455
Score = 30.4 bits (67), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Query: 59 VEDVNP----VATGHEREELEAELEGKNILEIDYPTGPFGTKDA 98
VE +NP V TGH +E++E L+G+NI + Y GT A
Sbjct: 40 VEKLNPDNIVVVTGHLKEQVEDALQGRNITFV-YQQQQLGTGHA 82
>sp|Q14J62|GLMU_FRAT1 Bifunctional protein GlmU OS=Francisella tularensis subsp.
tularensis (strain FSC 198) GN=glmU PE=3 SV=1
Length = 455
Score = 30.4 bits (67), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Query: 59 VEDVNP----VATGHEREELEAELEGKNILEIDYPTGPFGTKDA 98
VE +NP V TGH +E++E L+G+NI + Y GT A
Sbjct: 40 VEKLNPDNIVVVTGHLKEQVEDALQGRNITFV-YQQQQLGTGHA 82
>sp|A0Q565|GLMU_FRATN Bifunctional protein GlmU OS=Francisella tularensis subsp.
novicida (strain U112) GN=glmU PE=3 SV=1
Length = 455
Score = 30.4 bits (67), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Query: 59 VEDVNP----VATGHEREELEAELEGKNILEIDYPTGPFGTKDA 98
VE +NP V TGH +E++E L+G+NI + Y GT A
Sbjct: 40 VEKLNPDNIVVVTGHLKEQVEDALQGRNITFV-YQQQQLGTGHA 82
>sp|B5EEE6|SYE_GEOBB Glutamate--tRNA ligase OS=Geobacter bemidjiensis (strain Bem / ATCC
BAA-1014 / DSM 16622) GN=gltX PE=3 SV=1
Length = 467
Score = 30.0 bits (66), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 58 RVEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDAPAVVKSYYDKRI 110
R+ED + + +E ++A LEG L +D+ GPF D + K Y +K I
Sbjct: 41 RIEDTDVARS--TQESVDAILEGMTWLGLDWDEGPFYQSDNFPLYKEYVEKLI 91
>sp|Q9CMI7|HIS82_PASMU Histidinol-phosphate aminotransferase 2 OS=Pasteurella multocida
(strain Pm70) GN=hisC2 PE=3 SV=1
Length = 365
Score = 29.6 bits (65), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 55 VKKRVEDVNPVATGHEREELEAELEGKNILEIDYPTGPFGTKDA 98
V + V+ ++P G EELE EL NI+++ PFG D+
Sbjct: 7 VNEGVKQLHPYQAGKPIEELERELGITNIIKLASNENPFGLPDS 50
>sp|O53204|Y2477_MYCTU Uncharacterized ABC transporter ATP-binding protein Rv2477c/MT2552
OS=Mycobacterium tuberculosis GN=Rv2477c PE=1 SV=1
Length = 558
Score = 29.6 bits (65), Expect = 7.7, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 19/85 (22%)
Query: 65 VATGHEREELEAEL---EGKNILEIDYPTGPFGTKD------------APAVVKS----Y 105
V +G ER L L +G N++ +D PT + AVV S +
Sbjct: 442 VLSGGERNRLNLALTLKQGGNLILLDEPTNDLDVETLGSLENALLNFPGCAVVISHDRWF 501
Query: 106 YDKRIVGCPGGEGEDEHDVVWFWLE 130
D+ EG+D+++ WFW E
Sbjct: 502 LDRTCTHILAWEGDDDNEAKWFWFE 526
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,998,481
Number of Sequences: 539616
Number of extensions: 2894196
Number of successful extensions: 7666
Number of sequences better than 100.0: 32
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 7640
Number of HSP's gapped (non-prelim): 32
length of query: 156
length of database: 191,569,459
effective HSP length: 107
effective length of query: 49
effective length of database: 133,830,547
effective search space: 6557696803
effective search space used: 6557696803
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)