BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>031634
MLLARYKELRHIEAYKYELFAPRKSSRSYMPYSNVDSFLKICKILGLTGIDLFSPSDVVE
KKNTRKVCMCIRSLSKKARSRQLNVPDFDKVTCTVAMPTDNVGCIRRRLEQSQRRFLSNA
NLNSDRVLTADLKKVKSFSFFLKSKKFFFYFSWCLL

High Scoring Gene Products

Symbol, full name Information P value
DDB_G0289033
growth-arrest-specific protein 2 domain-containing protein (GAS2) 		gene from Dictyostelium discoideum 4.3e-05

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  031634
        (156 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

DICTYBASE|DDB_G0289033 - symbol:DDB_G0289033 "growth-arre...   112  4.3e-05   1


>DICTYBASE|DDB_G0289033 [details] [associations]
            symbol:DDB_G0289033 "growth-arrest-specific protein 2
            domain-containing protein (GAS2)" species:44689 "Dictyostelium
            discoideum" [GO:0007050 "cell cycle arrest" evidence=IEA]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0003674
            "molecular_function" evidence=ND] InterPro:IPR001715
            InterPro:IPR003108 Pfam:PF00307 Pfam:PF02187 PROSITE:PS50021
            PROSITE:PS51460 SMART:SM00033 dictyBase:DDB_G0289033 GO:GO:0007050
            EMBL:AAFI02000129 Gene3D:1.10.418.10 SUPFAM:SSF47576
            Gene3D:3.30.920.20 SUPFAM:SSF143575 RefSeq:XP_636437.1
            ProteinModelPortal:Q54I34 EnsemblProtists:DDB0232247 GeneID:8626930
            KEGG:ddi:DDB_G0289033 eggNOG:NOG286126 InParanoid:Q54I34
            OMA:CACLELG Uniprot:Q54I34
        Length = 1589

 Score = 112 (44.5 bits), Expect = 4.3e-05, P = 4.3e-05
 Identities = 24/58 (41%), Positives = 34/58 (58%)

Query:    24 KSSRSYMPYSNVDSFLKICKILGLTGIDLFSPSDVVEKKNTRKVCMCIRSLSKKARSR 81
             K   SYM   N++ FL  C  LG++   LF P+D+ EKKN +KV  C+ +LS +   R
Sbjct:   156 KKGPSYMKLENINFFLCACLELGVSSNCLFLPTDLYEKKNLKKVIYCLLALSIQGSKR 213


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.136   0.405    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      156       136   0.00091  102 3  11 22  0.50    30
                                                     30  0.45    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  552 (59 KB)
  Total size of DFA:  123 KB (2079 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.83u 0.12s 14.95t   Elapsed:  00:00:00
  Total cpu time:  14.83u 0.12s 14.95t   Elapsed:  00:00:00
  Start:  Thu May  9 17:05:29 2013   End:  Thu May  9 17:05:29 2013

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