BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031634
(156 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O14188|RNG2_SCHPO Ras GTPase-activating-like protein rng2 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=rng2 PE=1 SV=1
Length = 1489
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 46/98 (46%), Gaps = 7/98 (7%)
Query: 34 NVDSFLKICKILGLTGIDLFSPSDVVEKKNTRKVCMCIRSLSKKARSRQLNVPDFDKVTC 93
N++ FL +GL I F +D+ E KN KV CI +LS + L P K
Sbjct: 103 NINKFLDFIHGIGLPEIFHFELTDIYEGKNLPKVIYCIHALSYFLSMQDL-APPLIKSDE 161
Query: 94 TVAMPTDNVGCIRRRLEQSQRRFLSNANLNSDRVLTAD 131
++ ++V I RRL Q SN L + + L+AD
Sbjct: 162 NLSFTDEDVSIIVRRLRQ------SNVILPNFKALSAD 193
>sp|Q55E26|GXCB_DICDI Rac guanine nucleotide exchange factor B OS=Dictyostelium
discoideum GN=gxcB PE=2 SV=1
Length = 1198
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 23 RKSSRSYMPYSNVDSFLKICKILGLTGIDLFSPSDVVEKKNTRKVCMCIRSLSKKA 78
+S+ S+ N++++LK CK LGL ++LF+ D+ E K+ V I L K A
Sbjct: 176 NESTISFKQLENIENYLKACKTLGLQSVNLFNSIDLHENKDISLVITNIVVLGKHA 231
Score = 33.5 bits (75), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%)
Query: 25 SSRSYMPYSNVDSFLKICKILGLTGIDLFSPSDVVEKKNTRKVCMCIRSLS 75
+ S+ N+ ++LK C ++GL DLF D+ E+KN V I L
Sbjct: 392 GNSSFKKMENIGNYLKGCLVVGLKKTDLFDTPDLFEEKNINFVISNIHVLG 442
>sp|P0DA13|CARA_STRPQ Carbamoyl-phosphate synthase small chain OS=Streptococcus pyogenes
serotype M3 (strain SSI-1) GN=carA PE=3 SV=1
Length = 360
Score = 37.7 bits (86), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 35 VDSFLKICKILGLTGIDLFSPSDVVEKKNTRKVCMC-----IRSLSKKARSRQLNVPDFD 89
+D+FLKI I G++GID + + ++ + T K M I+ L + R+ L +
Sbjct: 97 LDAFLKIKGIPGISGIDTRALTKIIRQHGTMKATMADDGDSIQHLKDQLRATVLPTNTIE 156
Query: 90 KVTCTVAMPTDNVG 103
+V+ A P +G
Sbjct: 157 QVSTKTAYPAPGIG 170
>sp|Q5XCR8|CARA_STRP6 Carbamoyl-phosphate synthase small chain OS=Streptococcus pyogenes
serotype M6 (strain ATCC BAA-946 / MGAS10394) GN=carA
PE=3 SV=1
Length = 360
Score = 37.7 bits (86), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 35 VDSFLKICKILGLTGIDLFSPSDVVEKKNTRKVCMC-----IRSLSKKARSRQLNVPDFD 89
+D+FLKI I G++GID + + ++ + T K M I+ L + R+ L +
Sbjct: 97 LDAFLKIKGIPGISGIDTRALTKIIRQHGTMKATMADDGDSIQHLKDQLRATVLPTNTIE 156
Query: 90 KVTCTVAMPTDNVG 103
+V+ A P +G
Sbjct: 157 QVSTKTAYPAPGIG 170
>sp|P0DA12|CARA_STRP3 Carbamoyl-phosphate synthase small chain OS=Streptococcus pyogenes
serotype M3 (strain ATCC BAA-595 / MGAS315) GN=carA PE=3
SV=1
Length = 360
Score = 37.7 bits (86), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 35 VDSFLKICKILGLTGIDLFSPSDVVEKKNTRKVCMC-----IRSLSKKARSRQLNVPDFD 89
+D+FLKI I G++GID + + ++ + T K M I+ L + R+ L +
Sbjct: 97 LDAFLKIKGIPGISGIDTRALTKIIRQHGTMKATMADDGDSIQHLKDQLRATVLPTNTIE 156
Query: 90 KVTCTVAMPTDNVG 103
+V+ A P +G
Sbjct: 157 QVSTKTAYPAPGIG 170
>sp|P63735|CARA_STRP1 Carbamoyl-phosphate synthase small chain OS=Streptococcus pyogenes
serotype M1 GN=carA PE=3 SV=1
Length = 360
Score = 37.7 bits (86), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 35 VDSFLKICKILGLTGIDLFSPSDVVEKKNTRKVCMC-----IRSLSKKARSRQLNVPDFD 89
+D+FLKI I G++GID + + ++ + T K M I+ L + R+ L +
Sbjct: 97 LDAFLKIKGIPGISGIDTRALTKIIRQHGTMKATMADDGDSIQHLKDQLRATVLPTNTIE 156
Query: 90 KVTCTVAMPTDNVG 103
+V+ A P +G
Sbjct: 157 QVSTKTAYPAPGIG 170
>sp|P58894|CARA_STRP8 Carbamoyl-phosphate synthase small chain OS=Streptococcus pyogenes
serotype M18 (strain MGAS8232) GN=carA PE=3 SV=1
Length = 360
Score = 37.7 bits (86), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 35 VDSFLKICKILGLTGIDLFSPSDVVEKKNTRKVCMC-----IRSLSKKARSRQLNVPDFD 89
+D+FLKI I G++GID + + ++ + T K M I+ L + R+ L +
Sbjct: 97 LDAFLKIKGIPGISGIDTRALTKIIRQHGTMKATMADDGDSIQHLKDQLRATVLPTNTIE 156
Query: 90 KVTCTVAMPTDNVG 103
+V+ A P +G
Sbjct: 157 QVSTKTAYPAPGIG 170
>sp|Q99501|GA2L1_HUMAN GAS2-like protein 1 OS=Homo sapiens GN=GAS2L1 PE=1 SV=2
Length = 681
Score = 37.4 bits (85), Expect = 0.037, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 28 SYMPYSNVDSFLKICKI-LGLTGIDLFSPSDVVEKKNTRKVCMCIRSLSKKARSRQLNVP 86
S+M NV +F+ C++ LG+ + +F D+V +KN + V +C+ ++++ L P
Sbjct: 96 SFMARDNVATFIGWCRVELGVPEVLMFETEDLVLRKNEKSVVLCLLEVARRGARLGLLAP 155
>sp|Q8JZP9|GA2L1_MOUSE GAS2-like protein 1 OS=Mus musculus GN=Gas2l1 PE=2 SV=1
Length = 678
Score = 37.0 bits (84), Expect = 0.052, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 28 SYMPYSNVDSFLKICKI-LGLTGIDLFSPSDVVEKKNTRKVCMCIRSLSKKARSRQLNVP 86
S+M NV SF+ C+ LG+ + +F D+V +KN + V +C+ ++++ L P
Sbjct: 96 SFMARDNVASFIGWCRAELGVPEVLMFETEDLVLRKNEKSVVLCLLEVARRGARLGLLAP 155
>sp|P11862|GAS2_MOUSE Growth arrest-specific protein 2 OS=Mus musculus GN=Gas2 PE=1 SV=1
Length = 314
Score = 36.2 bits (82), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%)
Query: 26 SRSYMPYSNVDSFLKICKILGLTGIDLFSPSDVVEKKNTRKVCMCIRSLSKKARSRQLNV 85
S S+ N +FL C+ LG+ LF +V K R+VC+C+ L + A +
Sbjct: 105 SGSFFARDNTANFLSWCRDLGVDETCLFESEGLVLHKQPREVCLCLLELGRIAARYGVEP 164
Query: 86 PDFDKV 91
P K+
Sbjct: 165 PGLIKL 170
>sp|O43903|GAS2_HUMAN Growth arrest-specific protein 2 OS=Homo sapiens GN=GAS2 PE=1 SV=1
Length = 313
Score = 35.8 bits (81), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%)
Query: 26 SRSYMPYSNVDSFLKICKILGLTGIDLFSPSDVVEKKNTRKVCMCIRSLSKKARSRQLNV 85
S S+ N +FL C+ LG+ LF +V K R+VC+C+ L + A +
Sbjct: 104 SGSFFARDNTANFLSWCRDLGVDETCLFESEGLVLHKQPREVCLCLLELGRIAARYGVEP 163
Query: 86 PDFDKV 91
P K+
Sbjct: 164 PGLIKL 169
>sp|Q8NHY3|GA2L2_HUMAN GAS2-like protein 2 OS=Homo sapiens GN=GAS2L2 PE=2 SV=1
Length = 880
Score = 35.8 bits (81), Expect = 0.11, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 28 SYMPYSNVDSFLKIC-KILGLTGIDLFSPSDVVEKKNTRKVCMCIRSLSKKA 78
++ NV +F++ C K +G+ + +F D+V +KN + V +C+ L ++A
Sbjct: 107 TFQARDNVSNFIQWCRKEMGIQEVLMFETEDLVLRKNVKNVVLCLLELGRRA 158
>sp|Q3UH68|LIMC1_MOUSE LIM and calponin homology domains-containing protein 1 OS=Mus
musculus GN=Limch1 PE=1 SV=2
Length = 1057
Score = 35.4 bits (80), Expect = 0.16, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 21/111 (18%)
Query: 23 RKSSRSYMPYSNVDS---FLKICKILGLTGIDLFSPSDVVEKKN---------TRK---V 67
+K +R P + +D+ FL+ CK LGL LF PSD+ + N +RK V
Sbjct: 67 KKINRLPTPIAGLDNTILFLRGCKELGLKESQLFDPSDLQDTSNRVTVKNLDYSRKLKNV 126
Query: 68 CMCIRSLSKKARS------RQLNVPDFDKVTCTVAMPTDNVGCIRRRLEQS 112
+ I L K A S LN+ +F+ + + TD++ +R + S
Sbjct: 127 LVTIYWLGKAANSCASYGGTTLNLKEFEGLLAQMRKETDDIDSPKRSIRDS 177
>sp|P37803|CNN1_MELGA Calponin-1 (Fragment) OS=Meleagris gallopavo GN=CNN1 PE=1 SV=1
Length = 176
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 42/90 (46%), Gaps = 17/90 (18%)
Query: 27 RSYMPYSNVDSFLKICKILGLTGIDLFSPSDVVEKKNTRKVCMCIRSLSKKARSRQLNVP 86
+++ N+ +FL+ K G+ D+F +D+ E N +V + +L+ +A+++
Sbjct: 74 QNWHKLENIGNFLRAIKHYGVKPHDIFEANDLFENTNHTQVQSTLIALASQAKTK----- 128
Query: 87 DFDKVTCTVAMPTDNVGCIRRRLEQSQRRF 116
+NVG + E+ QRRF
Sbjct: 129 ------------GNNVGLGVKYAEKQQRRF 146
>sp|Q5SSG4|GA2L2_MOUSE GAS2-like protein 2 OS=Mus musculus GN=Gas2l2 PE=2 SV=1
Length = 860
Score = 35.0 bits (79), Expect = 0.18, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 28 SYMPYSNVDSFLKIC-KILGLTGIDLFSPSDVVEKKNTRKVCMCIRSLSKKA 78
++ N+ +F++ C K +G+ + +F D+V +KN + V +C+ L ++A
Sbjct: 107 TFQARDNISNFIQWCRKEMGIQEVLMFETEDLVLRKNVKSVVLCLLELGRRA 158
>sp|Q8DUP4|CARA_STRMU Carbamoyl-phosphate synthase small chain OS=Streptococcus mutans
serotype c (strain ATCC 700610 / UA159) GN=carA PE=3
SV=1
Length = 362
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 5/74 (6%)
Query: 35 VDSFLKICKILGLTGIDLFSPSDVVEKKNTRKVCMC-----IRSLSKKARSRQLNVPDFD 89
+D FLK I G++GID + + ++ T K + I L + R+ L + +
Sbjct: 97 LDEFLKSKNIPGISGIDTRALTKIIRHHGTMKATLANEGDSIEHLQDQLRATVLPTNNIE 156
Query: 90 KVTCTVAMPTDNVG 103
+V+ A P VG
Sbjct: 157 QVSTKTAYPAPGVG 170
>sp|Q08093|CNN2_MOUSE Calponin-2 OS=Mus musculus GN=Cnn2 PE=2 SV=1
Length = 305
Score = 34.3 bits (77), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 35/60 (58%)
Query: 24 KSSRSYMPYSNVDSFLKICKILGLTGIDLFSPSDVVEKKNTRKVCMCIRSLSKKARSRQL 83
+S +++ N+ +F+K G+ +DLF +D+ E N +V + + +L+ KA+++ L
Sbjct: 77 RSMQNWHQLENLSNFIKAMVSYGMNPVDLFEANDLFESGNMTQVQVSLLALAGKAKTKGL 136
>sp|Q08094|CNN2_PIG Calponin-2 (Fragment) OS=Sus scrofa GN=CNN2 PE=2 SV=1
Length = 296
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 35/60 (58%)
Query: 24 KSSRSYMPYSNVDSFLKICKILGLTGIDLFSPSDVVEKKNTRKVCMCIRSLSKKARSRQL 83
+S +++ N+ +F+K G+ +DLF +D+ E N +V + + +L+ KA+++ L
Sbjct: 77 RSMQNWHQLENLSNFIKAMVSYGMNPVDLFEANDLFESGNMTQVQVSLLALAGKAKTKGL 136
>sp|Q5RFN6|CNN2_PONAB Calponin-2 OS=Pongo abelii GN=CNN2 PE=2 SV=3
Length = 309
Score = 34.3 bits (77), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 35/61 (57%)
Query: 23 RKSSRSYMPYSNVDSFLKICKILGLTGIDLFSPSDVVEKKNTRKVCMCIRSLSKKARSRQ 82
+S +++ N+ +F+K G+ +DLF +D+ E N +V + + +L+ KA+++
Sbjct: 76 NRSMQNWHQLENLSNFIKAMVSYGMNPVDLFEANDLFESGNMTQVQVSLLALAGKAKTKG 135
Query: 83 L 83
L
Sbjct: 136 L 136
>sp|Q99439|CNN2_HUMAN Calponin-2 OS=Homo sapiens GN=CNN2 PE=1 SV=4
Length = 309
Score = 34.3 bits (77), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 35/61 (57%)
Query: 23 RKSSRSYMPYSNVDSFLKICKILGLTGIDLFSPSDVVEKKNTRKVCMCIRSLSKKARSRQ 82
+S +++ N+ +F+K G+ +DLF +D+ E N +V + + +L+ KA+++
Sbjct: 76 NRSMQNWHQLENLSNFIKAMVSYGMNPVDLFEANDLFESGNMTQVQVSLLALAGKAKTKG 135
Query: 83 L 83
L
Sbjct: 136 L 136
>sp|Q3SYU6|CNN2_BOVIN Calponin-2 OS=Bos taurus GN=CNN2 PE=2 SV=3
Length = 309
Score = 34.3 bits (77), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 35/60 (58%)
Query: 24 KSSRSYMPYSNVDSFLKICKILGLTGIDLFSPSDVVEKKNTRKVCMCIRSLSKKARSRQL 83
+S +++ N+ +F+K G+ +DLF +D+ E N +V + + +L+ KA+++ L
Sbjct: 77 RSMQNWHQLENLSNFIKAMVSYGMNPVDLFEANDLFESGNLTQVQVSLLALAGKAKTKGL 136
>sp|P26932|CNN1_CHICK Calponin-1 OS=Gallus gallus GN=CNN1 PE=1 SV=2
Length = 292
Score = 34.3 bits (77), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 42/90 (46%), Gaps = 17/90 (18%)
Query: 27 RSYMPYSNVDSFLKICKILGLTGIDLFSPSDVVEKKNTRKVCMCIRSLSKKARSRQLNVP 86
+++ N+ +FL+ K G+ D+F +D+ E N +V + +L+ +A+++
Sbjct: 80 QNWHKLENIGNFLRAIKHYGVKPHDIFEANDLFENTNHTQVQSTLIALASQAKTK----- 134
Query: 87 DFDKVTCTVAMPTDNVGCIRRRLEQSQRRF 116
+NVG + E+ QRRF
Sbjct: 135 ------------GNNVGLGVKYAEKQQRRF 152
>sp|Q9UPQ0|LIMC1_HUMAN LIM and calponin homology domains-containing protein 1 OS=Homo
sapiens GN=LIMCH1 PE=1 SV=4
Length = 1083
Score = 33.9 bits (76), Expect = 0.40, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 21/111 (18%)
Query: 23 RKSSRSYMPYSNVDS---FLKICKILGLTGIDLFSPSDVVEKKN---------TRK---V 67
+K +R P + +D+ FL+ CK LGL LF PSD+ + N +RK V
Sbjct: 67 KKINRLPTPIAGLDNIILFLRGCKELGLKESQLFDPSDLQDTSNRVTVKSLDYSRKLKNV 126
Query: 68 CMCIRSLSKKARS------RQLNVPDFDKVTCTVAMPTDNVGCIRRRLEQS 112
+ I L K A S LN+ +F+ + + TD++ +R + S
Sbjct: 127 LVTIYWLGKAANSCTSYSGTTLNLKEFEGLLAQMRKDTDDIESPKRSIRDS 177
>sp|Q9Y2L9|LRCH1_HUMAN Leucine-rich repeat and calponin homology domain-containing protein
1 OS=Homo sapiens GN=LRCH1 PE=1 SV=3
Length = 728
Score = 33.9 bits (76), Expect = 0.45, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 9/59 (15%)
Query: 34 NVDSFLKICKILGLTGIDLFSPSDVVEK--KNTRKVCMCIRSLSKKA-------RSRQL 83
NV++FL+ C+ LG+ DL SP D+++ ++ RK + +L +KA RSR L
Sbjct: 645 NVENFLEACRKLGVPEADLCSPCDILQLDFRHIRKTVDTLLALGEKAPPPTSALRSRDL 703
>sp|O75427|LRCH4_HUMAN Leucine-rich repeat and calponin homology domain-containing protein
4 OS=Homo sapiens GN=LRCH4 PE=1 SV=2
Length = 683
Score = 32.7 bits (73), Expect = 0.96, Method: Composition-based stats.
Identities = 13/27 (48%), Positives = 21/27 (77%)
Query: 34 NVDSFLKICKILGLTGIDLFSPSDVVE 60
NV+SFL+ C+ +G+ DL SPSD+++
Sbjct: 603 NVESFLEACRKMGVPEADLCSPSDLLQ 629
>sp|P63734|CARA_STRR6 Carbamoyl-phosphate synthase small chain OS=Streptococcus
pneumoniae (strain ATCC BAA-255 / R6) GN=carA PE=3 SV=1
Length = 359
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 9/68 (13%)
Query: 35 VDSFLKICKILGLTGIDLFSPSDVVEKKNTRKVCMCIRSLSKKARSRQLNVPDFDKVTCT 94
+D FLK KI G++GID + + ++ K T + + S + QL
Sbjct: 97 LDEFLKAKKIPGISGIDTRALTKIIRKHGTMRATLTHVGDSMDHVTDQLQA--------- 147
Query: 95 VAMPTDNV 102
+PTDN+
Sbjct: 148 TVLPTDNI 155
>sp|P63733|CARA_STRPN Carbamoyl-phosphate synthase small chain OS=Streptococcus
pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
GN=carA PE=3 SV=1
Length = 359
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 9/68 (13%)
Query: 35 VDSFLKICKILGLTGIDLFSPSDVVEKKNTRKVCMCIRSLSKKARSRQLNVPDFDKVTCT 94
+D FLK KI G++GID + + ++ K T + + S + QL
Sbjct: 97 LDEFLKAKKIPGISGIDTRALTKIIRKHGTMRATLTHVGDSMDHVTDQLQA--------- 147
Query: 95 VAMPTDNV 102
+PTDN+
Sbjct: 148 TVLPTDNI 155
>sp|P63732|CARA_STRA5 Carbamoyl-phosphate synthase small chain OS=Streptococcus
agalactiae serotype V (strain ATCC BAA-611 / 2603 V/R)
GN=carA PE=3 SV=1
Length = 358
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 22/35 (62%)
Query: 35 VDSFLKICKILGLTGIDLFSPSDVVEKKNTRKVCM 69
+D FLK+ I G++GID + + ++ K T K C+
Sbjct: 96 LDEFLKLKGIPGISGIDTRALTKIIRKHGTMKACL 130
>sp|P63731|CARA_STRA3 Carbamoyl-phosphate synthase small chain OS=Streptococcus
agalactiae serotype III (strain NEM316) GN=carA PE=3
SV=1
Length = 358
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 22/35 (62%)
Query: 35 VDSFLKICKILGLTGIDLFSPSDVVEKKNTRKVCM 69
+D FLK+ I G++GID + + ++ K T K C+
Sbjct: 96 LDEFLKLKGIPGISGIDTRALTKIIRKHGTMKACL 130
>sp|Q921G6|LRCH4_MOUSE Leucine-rich repeat and calponin homology domain-containing protein
4 OS=Mus musculus GN=Lrch4 PE=2 SV=1
Length = 680
Score = 31.6 bits (70), Expect = 1.8, Method: Composition-based stats.
Identities = 13/26 (50%), Positives = 20/26 (76%)
Query: 34 NVDSFLKICKILGLTGIDLFSPSDVV 59
NV+SFL+ C+ +G+ DL SPSD++
Sbjct: 600 NVESFLEACRKMGVPEADLCSPSDLL 625
>sp|Q24799|MYPH_ECHGR Myophilin OS=Echinococcus granulosus PE=2 SV=1
Length = 190
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 44/98 (44%), Gaps = 11/98 (11%)
Query: 25 SSRSYMPY---SNVDSFLKICKILGLTGIDLFSPSDVVEKKNTRKVCMCIRSLSKKARSR 81
+ + MP+ N+ +FL+ K G+ DLF D+ EKK+ +V + +L + ++
Sbjct: 74 NENATMPFKIMENISAFLEAMKGYGVPVADLFQTVDLFEKKDIAQVTRTLFALGRTCQTH 133
Query: 82 QLNVPDFDKVTCTVAMPTDNVGCIRRRLEQSQRRFLSN 119
P++ + T+N +R + Q R N
Sbjct: 134 ----PEYSGPVLGPKLATEN----KREFTEQQLREGQN 163
>sp|P57302|ODP2_BUCAI Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Buchnera aphidicola subsp.
Acyrthosiphon pisum (strain APS) GN=aceF PE=3 SV=1
Length = 396
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Query: 51 DLFSPS-DVVEKKNTRKVCMCIRSLSKKARSRQLNVPDFDKVTCTVAMPTDNVGCI 105
DLF P V KKN +++ + LS+KAR+R+LN+ D T++ N+G I
Sbjct: 271 DLFVPVLKDVNKKNIKQLSSELILLSEKARTRKLNIEDMTGGCFTIS----NLGGI 322
>sp|P41737|LRCH1_FELCA Leucine-rich repeat and calponin homology domain-containing protein
1 (Fragment) OS=Felis catus PE=2 SV=2
Length = 251
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 26/41 (63%)
Query: 34 NVDSFLKICKILGLTGIDLFSPSDVVEKKNTRKVCMCIRSL 74
NV++FL+ C+ LG+ L P ++E+K KV + +++L
Sbjct: 200 NVENFLEACRKLGVPEEKLCLPHHILEEKGLVKVGITVQAL 240
>sp|O14185|STG1_SCHPO Transgelin OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=stg1 PE=4 SV=1
Length = 174
Score = 30.8 bits (68), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 23 RKSSRSYMPYSNVDSFLKICK-ILGLTGIDLFSPSDVVEKKNTRKVCMCIRSLSKKA 78
++S+ ++ N+ +F+ + ++ + D+F SD+ E++N +V I S S+ A
Sbjct: 52 KESNMPFVQMENISAFINYAQQVVHVPSQDMFQTSDLFERRNDEQVLRSIHSFSRYA 108
>sp|Q5VUJ6|LRCH2_HUMAN Leucine-rich repeat and calponin homology domain-containing protein
2 OS=Homo sapiens GN=LRCH2 PE=2 SV=2
Length = 765
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 26/41 (63%)
Query: 34 NVDSFLKICKILGLTGIDLFSPSDVVEKKNTRKVCMCIRSL 74
NV++FL CK LG++ L P ++E++ KV + +++L
Sbjct: 711 NVENFLDACKKLGVSQERLCLPHHILEERGLVKVGVTVQAL 751
>sp|Q96II8|LRCH3_HUMAN Leucine-rich repeat and calponin homology domain-containing protein
3 OS=Homo sapiens GN=LRCH3 PE=1 SV=2
Length = 777
Score = 30.4 bits (67), Expect = 5.0, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 30/49 (61%)
Query: 34 NVDSFLKICKILGLTGIDLFSPSDVVEKKNTRKVCMCIRSLSKKARSRQ 82
NV++FL+ C+ +G+ L P ++E+K +V + +++L + A +Q
Sbjct: 721 NVENFLEACRKIGVPQEQLCLPLHILEEKGLSQVAVTVQALLELAPPKQ 769
>sp|P14318|MP20_DROME Muscle-specific protein 20 OS=Drosophila melanogaster GN=Mp20 PE=2
SV=2
Length = 184
Score = 30.4 bits (67), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%)
Query: 33 SNVDSFLKICKILGLTGIDLFSPSDVVEKKNTRKVCMCIRSLSK 76
N+++F K K G+ ID+F D+ EKK+ V I +L +
Sbjct: 77 ENINNFQKALKEYGVPDIDVFQTVDLYEKKDIANVTNTIFALGR 120
>sp|A7ZFC1|DAPE_CAMC1 Succinyl-diaminopimelate desuccinylase OS=Campylobacter concisus
(strain 13826) GN=dapE PE=3 SV=1
Length = 363
Score = 30.0 bits (66), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 4/100 (4%)
Query: 49 GIDLFSPSDVV--EKKNTRKVCMCIRS-LSKKARSRQLNVPDFDKVTCTVAMPTDNVGCI 105
G + FSPS +V + + +VC S LS R N+ D + V + D +
Sbjct: 212 GSEFFSPSKIVVTDIRGGMQVCNVTPSELSIMFNVRNSNLTDVNDVESYLRSVLDGL-SY 270
Query: 106 RRRLEQSQRRFLSNANLNSDRVLTADLKKVKSFSFFLKSK 145
++QS +RFL+N + R L A + K+ + L +K
Sbjct: 271 ELSIKQSSKRFLTNKDSKIVRNLMASVTKITGVTPLLNTK 310
>sp|Q3UWW6|GA2L3_MOUSE GAS2-like protein 3 OS=Mus musculus GN=Gas2l3 PE=2 SV=1
Length = 683
Score = 29.3 bits (64), Expect = 9.0, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 27/52 (51%)
Query: 25 SSRSYMPYSNVDSFLKICKILGLTGIDLFSPSDVVEKKNTRKVCMCIRSLSK 76
+S S+ N +FL C+ +G+ LF +V K+ R+V +C+ + +
Sbjct: 117 ASGSFFARDNTANFLHWCRHIGVDETYLFESEGLVLHKDPRQVYLCLLEIGR 168
>sp|Q86XJ1|GA2L3_HUMAN GAS2-like protein 3 OS=Homo sapiens GN=GAS2L3 PE=1 SV=1
Length = 694
Score = 29.3 bits (64), Expect = 9.1, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 27/52 (51%)
Query: 25 SSRSYMPYSNVDSFLKICKILGLTGIDLFSPSDVVEKKNTRKVCMCIRSLSK 76
+S S+ N +FL C+ +G+ LF +V K+ R+V +C+ + +
Sbjct: 115 ASGSFFARDNTANFLHWCRDIGVDETYLFESEGLVLHKDPRQVYLCLLEIGR 166
>sp|Q3UMG5|LRCH2_MOUSE Leucine-rich repeat and calponin homology domain-containing protein
2 OS=Mus musculus GN=Lrch2 PE=2 SV=2
Length = 773
Score = 29.3 bits (64), Expect = 9.9, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 26/41 (63%)
Query: 34 NVDSFLKICKILGLTGIDLFSPSDVVEKKNTRKVCMCIRSL 74
NV++FL CK LG++ L P ++E++ KV + +++L
Sbjct: 719 NVENFLDACKKLGVSQERLCLPHHILEERGLVKVGVTVQAL 759
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.137 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,299,232
Number of Sequences: 539616
Number of extensions: 1914110
Number of successful extensions: 5799
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 5770
Number of HSP's gapped (non-prelim): 53
length of query: 156
length of database: 191,569,459
effective HSP length: 107
effective length of query: 49
effective length of database: 133,830,547
effective search space: 6557696803
effective search space used: 6557696803
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 56 (26.2 bits)