Query 031636
Match_columns 156
No_of_seqs 129 out of 1028
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 04:38:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031636.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031636hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2o5a_A BH1328 protein; BHR21, 100.0 2E-43 6.9E-48 266.2 11.4 109 18-133 7-115 (125)
2 3ups_A Iojap-like protein; PSI 100.0 2E-42 6.7E-47 264.1 12.7 107 18-131 23-129 (136)
3 2id1_A Hypothetical protein; a 100.0 3.1E-42 1.1E-46 261.2 12.6 104 18-128 7-111 (130)
4 3mgj_A Uncharacterized protein 55.9 49 0.0017 23.9 7.1 52 18-69 18-71 (118)
5 3pg5_A Uncharacterized protein 40.0 72 0.0025 26.0 6.6 49 18-66 141-197 (361)
6 1s2o_A SPP, sucrose-phosphatas 39.5 65 0.0022 24.3 5.9 18 47-64 36-53 (244)
7 1j27_A Hypothetical protein TT 36.6 66 0.0023 22.4 5.1 60 11-72 19-80 (102)
8 2rcf_A Unidentified carboxysom 35.0 51 0.0018 22.7 4.2 31 28-59 31-61 (91)
9 3f41_A Phytase; tandem repeat, 33.5 1.4E+02 0.0047 27.3 7.8 120 15-144 392-526 (629)
10 2obb_A Hypothetical protein; s 32.2 28 0.00095 25.4 2.6 18 47-64 42-59 (142)
11 3nrd_A Histidine triad (HIT) p 29.9 40 0.0014 24.0 3.1 44 102-145 91-134 (135)
12 3mmj_A MYO-inositol hexaphosph 29.8 2.2E+02 0.0074 23.6 7.9 120 15-144 75-208 (314)
13 3ju3_A Probable 2-oxoacid ferr 29.5 53 0.0018 22.8 3.6 24 44-67 13-36 (118)
14 2c5k_P Vacuolar protein sortin 28.2 9.2 0.00032 20.7 -0.5 8 113-120 17-24 (26)
15 3hnw_A Uncharacterized protein 27.8 35 0.0012 25.0 2.5 27 46-73 18-44 (138)
16 1mp9_A Tata-binding protein; t 27.3 64 0.0022 25.0 4.0 59 15-73 27-94 (198)
17 1nf2_A Phosphatase; structural 26.4 47 0.0016 25.3 3.1 19 47-65 36-54 (268)
18 3qgm_A P-nitrophenyl phosphata 26.4 29 0.00098 26.1 1.8 21 46-66 41-61 (268)
19 5nul_A Flavodoxin; electron tr 26.3 1.4E+02 0.0048 20.1 5.4 34 20-54 18-55 (138)
20 1ytb_A Protein (tata binding p 25.8 75 0.0026 24.2 4.1 31 44-74 56-87 (180)
21 3ohe_A Histidine triad (HIT) p 25.4 55 0.0019 23.4 3.1 47 99-145 82-132 (137)
22 1xvi_A MPGP, YEDP, putative ma 25.3 41 0.0014 26.0 2.6 18 47-64 44-61 (275)
23 3pdw_A Uncharacterized hydrola 25.2 32 0.0011 25.9 1.9 20 47-66 40-59 (266)
24 1l6r_A Hypothetical protein TA 24.7 54 0.0018 24.7 3.1 18 47-64 40-57 (227)
25 3hly_A Flavodoxin-like domain; 24.5 1.3E+02 0.0045 21.3 5.1 36 20-56 20-63 (161)
26 1vdh_A Muconolactone isomerase 24.5 2.7E+02 0.0092 22.3 7.4 38 28-67 57-94 (249)
27 3ea0_A ATPase, para family; al 24.4 1.9E+02 0.0064 21.1 6.1 37 30-66 118-162 (245)
28 1t0t_V APC35880; pentamer, ico 23.6 2.8E+02 0.0097 22.1 7.3 38 28-67 53-90 (248)
29 2vxh_A Chlorite dismutase; hem 23.5 2.9E+02 0.0098 22.2 7.6 49 19-67 49-98 (251)
30 3fkq_A NTRC-like two-domain pr 23.3 2.7E+02 0.0094 22.5 7.4 49 18-66 247-303 (373)
31 3nn1_A Chlorite dismutase; fer 22.8 2.9E+02 0.0099 22.0 7.7 49 19-67 41-90 (241)
32 2zos_A MPGP, mannosyl-3-phosph 22.6 56 0.0019 24.7 2.8 18 47-64 35-52 (249)
33 2wp4_A Molybdopterin-convertin 22.1 1.1E+02 0.0039 22.4 4.4 56 18-73 69-127 (147)
34 3m21_A Probable tautomerase HP 22.1 1.4E+02 0.0048 18.0 4.4 21 53-73 13-33 (67)
35 2b30_A Pvivax hypothetical pro 21.8 69 0.0024 25.1 3.3 21 46-66 62-84 (301)
36 2omd_A Molybdopterin-convertin 21.7 86 0.0029 23.3 3.7 56 18-73 67-125 (154)
37 3hlu_A Uncharacterized protein 21.4 1.9E+02 0.0064 19.4 5.1 50 17-66 17-66 (96)
38 3i24_A HIT family hydrolase; s 21.3 65 0.0022 23.5 2.8 45 102-146 89-133 (149)
39 2z1c_A Hydrogenase expression/ 20.7 46 0.0016 22.0 1.7 26 90-115 36-61 (75)
40 1t3u_A Conserved hypothetical 20.6 72 0.0024 21.6 2.8 28 46-73 15-42 (104)
41 3fni_A Putative diflavin flavo 20.0 1.3E+02 0.0043 21.5 4.2 40 20-60 24-72 (159)
No 1
>2o5a_A BH1328 protein; BHR21, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.70A {Bacillus halodurans} SCOP: d.218.1.12
Probab=100.00 E-value=2e-43 Score=266.16 Aligned_cols=109 Identities=31% Similarity=0.557 Sum_probs=96.4
Q ss_pred HHHHHHHHHhCCCCceEEEecCCCCCccCEEEEEecCCHHHHHHHHHHHHHHHHHHhHHhcccccCCCccccCCCCCEEE
Q 031636 18 MTSVVNPTFDLKADDVKVIPVGEKCDWTDYMVIATGRSTWHVKNIAQAIIYKAKQRQREVGAKQMMLPSVQGQDTGKWVI 97 (156)
Q Consensus 18 ~~~iv~~L~dkka~DI~ViDv~~~~~~~Dy~VIaTg~S~rh~~aia~~i~~~lk~~~~e~g~~~~~~~~iEG~~~~~Wvl 97 (156)
++.++++|+++||+||++|||++.+++|||||||||+|.||++|||++|.+.+|+. |. .++++||..+++|+|
T Consensus 7 ~~~i~~al~dkKa~DI~vlDv~~~s~~~DyfVIatg~S~rqv~Aiad~v~~~lk~~----g~---~~~~~EG~~~~~WvL 79 (125)
T 2o5a_A 7 LQLAVNAVDDKKAEQVVALNMKGISLIADFFLICHGNSEKQVQAIAHELKKVAQEQ----GI---EIKRLEGYEQARWVL 79 (125)
T ss_dssp HHHHHHHHHHTTCEEEEEEECBTTBC--CEEEEEEESSHHHHHHHHHHHHHHHHHT----TC---CCCEEESTTTTSEEE
T ss_pred HHHHHHHHHHcCCCCeEEEEcCCCCcccCEEEEEEcCCHHHHHHHHHHHHHHHHHc----CC---ccccccCCCCCCEEE
Confidence 34899999999999999999999999999999999999999999999999999876 44 357999999999999
Q ss_pred EecCceEEEecChhhhhhcChhhhcCCCCCCCCchH
Q 031636 98 IDSGKVIVHALDENARAYYNLEDLWTSEPSKSATVQ 133 (156)
Q Consensus 98 lD~GdVvVHIft~E~Re~Y~LE~LW~~a~~~~~~~~ 133 (156)
+||||||||||+||.|+|||||+||+++|.++++..
T Consensus 80 lD~GdVvVHif~~e~RefY~LE~LW~da~~~~~~~~ 115 (125)
T 2o5a_A 80 IDLGDVVVHVFHKDERAYYNLEKLWGDAPTVELEGV 115 (125)
T ss_dssp EECSSEEEEEEETTCGGGTSTTTCC---CBCCSCC-
T ss_pred EeCCCEEEEeCCHHHHhHcCHHHHhCCCCccccccc
Confidence 999999999999999999999999999999877643
No 2
>3ups_A Iojap-like protein; PSI-biology, MCSG, midwest center for structural genomics, U function, structural genomics; HET: MSE; 1.75A {Zymomonas mobilis subsp}
Probab=100.00 E-value=2e-42 Score=264.05 Aligned_cols=107 Identities=30% Similarity=0.586 Sum_probs=96.6
Q ss_pred HHHHHHHHHhCCCCceEEEecCCCCCccCEEEEEecCCHHHHHHHHHHHHHHHHHHhHHhcccccCCCccccCCCCCEEE
Q 031636 18 MTSVVNPTFDLKADDVKVIPVGEKCDWTDYMVIATGRSTWHVKNIAQAIIYKAKQRQREVGAKQMMLPSVQGQDTGKWVI 97 (156)
Q Consensus 18 ~~~iv~~L~dkka~DI~ViDv~~~~~~~Dy~VIaTg~S~rh~~aia~~i~~~lk~~~~e~g~~~~~~~~iEG~~~~~Wvl 97 (156)
++.|+++|+++||+||+||||++.+++|||||||||+|.||++|||++|.+.+|+.+ . .++++||..+++|+|
T Consensus 23 ~~~i~~al~dkKa~DI~vlDv~~~s~~~DyfVIatg~S~rqv~Aiad~v~~~lk~~g----~---~~~~~EG~~~~~WvL 95 (136)
T 3ups_A 23 LKLVTDSLDDDQALEIATIPLAGKSSIADYMVIASGRSSRQVTAMAQKLADRIKAAT----G---YVSKIEGLPAADWVL 95 (136)
T ss_dssp HHHHHHHHHHTTCEEEEEEECTTTCSSCSEEEEEECSSHHHHHHHHHHHHHHHHHHH----C---CCCEEESCSSCSEEE
T ss_pred HHHHHHHHHHcCCCCeEEEECCCCCcccCEEEEEEcCCHHHHHHHHHHHHHHHHHcC----C---ccCcccCCCCCCEEE
Confidence 348999999999999999999999999999999999999999999999999998873 3 357999999999999
Q ss_pred EecCceEEEecChhhhhhcChhhhcCCCCCCCCc
Q 031636 98 IDSGKVIVHALDENARAYYNLEDLWTSEPSKSAT 131 (156)
Q Consensus 98 lD~GdVvVHIft~E~Re~Y~LE~LW~~a~~~~~~ 131 (156)
+||||||||||+||.|+|||||+||++++..+.+
T Consensus 96 lD~GdVvVHIf~~e~RefY~LE~LW~d~~~~d~~ 129 (136)
T 3ups_A 96 LDAGDIIIHLFRPEVRSFYNLERMWGFGDESDQP 129 (136)
T ss_dssp EECSSEEEEEECHHHHHHHHHHHHTTTTC-----
T ss_pred EeCCCEEEEeCCHHHHHHcCHHHHhCcCCcccch
Confidence 9999999999999999999999999999877544
No 3
>2id1_A Hypothetical protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.00A {Chromobacterium violaceum} SCOP: d.218.1.12
Probab=100.00 E-value=3.1e-42 Score=261.21 Aligned_cols=104 Identities=30% Similarity=0.585 Sum_probs=98.1
Q ss_pred HHHHHHHHHhCCCCceEEEecCCCCCccCEEEEEecCCHHHHHHHHHHHHHHHHHHhHHhcccccCCCccccCCCCCEEE
Q 031636 18 MTSVVNPTFDLKADDVKVIPVGEKCDWTDYMVIATGRSTWHVKNIAQAIIYKAKQRQREVGAKQMMLPSVQGQDTGKWVI 97 (156)
Q Consensus 18 ~~~iv~~L~dkka~DI~ViDv~~~~~~~Dy~VIaTg~S~rh~~aia~~i~~~lk~~~~e~g~~~~~~~~iEG~~~~~Wvl 97 (156)
++.++++|+++||+||++|||++.++++||||||||+|.||++|||++|.+.+|+. |. .+.++||.++++|+|
T Consensus 7 ~~~i~~al~dkKa~DI~vlDv~~~s~~~DyfVIaTg~S~rqv~Aiad~v~~~lk~~----g~---~~~~~EG~~~~~WvL 79 (130)
T 2id1_A 7 SKLAIEALEDIKGKDIIELDTSKLTSLFQRMIVATGDSNRQVKALANSVQVKLKEA----GV---DIVGSEGHESGEWVL 79 (130)
T ss_dssp HHHHHHHHHHTTCEEEEEEEGGGTCSSCSEEEEEECSSHHHHHHHHHHHHHHHHHT----TC---CCCBCCSTTTSSEEE
T ss_pred HHHHHHHHHHcCCCCeEEEEcCCCCcccCEEEEEEcCCHHHHHHHHHHHHHHHHHc----CC---cCccccCCCCCCEEE
Confidence 34899999999999999999999999999999999999999999999999999876 44 357999999999999
Q ss_pred EecCceEEEecChhhhhhcChhhhc-CCCCCC
Q 031636 98 IDSGKVIVHALDENARAYYNLEDLW-TSEPSK 128 (156)
Q Consensus 98 lD~GdVvVHIft~E~Re~Y~LE~LW-~~a~~~ 128 (156)
+||||||||||+||.|+|||||+|| +++|.+
T Consensus 80 lD~GdVvVHIf~~e~RefY~LE~LW~~da~~~ 111 (130)
T 2id1_A 80 VDAGDVVVHVMLPAVRDYYDIEALWGGQKPSF 111 (130)
T ss_dssp EEETTEEEEEECHHHHHHHCHHHHTTCCCCCC
T ss_pred EecCCEEEEcCCHHHHhHcCHHHHhcCCCccc
Confidence 9999999999999999999999999 899887
No 4
>3mgj_A Uncharacterized protein MJ1480; saccharop_DH_N domain, NESG, structural genomics, PSI-2, protein structure initiative; 2.70A {Methanocaldococcus jannaschii}
Probab=55.91 E-value=49 Score=23.94 Aligned_cols=52 Identities=19% Similarity=0.339 Sum_probs=40.2
Q ss_pred HHHHHHHHHhCCC-CceEEEecCCCCCccCEE-EEEecCCHHHHHHHHHHHHHH
Q 031636 18 MTSVVNPTFDLKA-DDVKVIPVGEKCDWTDYM-VIATGRSTWHVKNIAQAIIYK 69 (156)
Q Consensus 18 ~~~iv~~L~dkka-~DI~ViDv~~~~~~~Dy~-VIaTg~S~rh~~aia~~i~~~ 69 (156)
+..+.+.+.+..| -.|.=++|.....-+.|. +.++|.|..|+.+|...|.+.
T Consensus 18 l~~~LD~I~d~GG~F~I~~f~vG~~k~d~SyA~l~V~a~d~e~L~~Il~~L~~l 71 (118)
T 3mgj_A 18 LPKVFDKILDMGGDYKVLEFEIGKRKTDPSYAKILVIGRDERHVDEILNELRDL 71 (118)
T ss_dssp HHHHHHHHHHTTCEEEEEEEECCSSTTSCEEEEEEEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCEEEEEEecCCCCCCcceEEEEEecCCHHHHHHHHHHHHHc
Confidence 5677888888888 588888997765555555 778999999999988877544
No 5
>3pg5_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 3.30A {Corynebacterium diphtheriae}
Probab=39.99 E-value=72 Score=26.02 Aligned_cols=49 Identities=14% Similarity=0.066 Sum_probs=36.0
Q ss_pred HHHHHHHHHhCCCCceEEEecCCC--------CCccCEEEEEecCCHHHHHHHHHHH
Q 031636 18 MTSVVNPTFDLKADDVKVIPVGEK--------CDWTDYMVIATGRSTWHVKNIAQAI 66 (156)
Q Consensus 18 ~~~iv~~L~dkka~DI~ViDv~~~--------~~~~Dy~VIaTg~S~rh~~aia~~i 66 (156)
+..+++.+.+...-|+++||.+.- -..+|++||.+..+..-++++...+
T Consensus 141 l~~ll~~l~~~~~yD~VIID~pP~l~~~~~~aL~~aD~viip~~~~~~s~~~~~~l~ 197 (361)
T 3pg5_A 141 AGQLAHAMERDDRYDVIFFDVGPSLGPFNRTVLLGCDAFVTPTATDLFSFHAFGNLA 197 (361)
T ss_dssp HHHHHHHHHHTTCCSEEEEECCSCCSHHHHHHHTTCSEEEEEECCSHHHHHHHHHHH
T ss_pred HHHHHHHHhhccCCCEEEEECCCCcCHHHHHHHHHCCEEEEEecCChHHHHHHHHHH
Confidence 556666666655789999999863 2348999999998877776665433
No 6
>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*
Probab=39.46 E-value=65 Score=24.32 Aligned_cols=18 Identities=33% Similarity=0.617 Sum_probs=13.7
Q ss_pred EEEEEecCCHHHHHHHHH
Q 031636 47 YMVIATGRSTWHVKNIAQ 64 (156)
Q Consensus 47 y~VIaTg~S~rh~~aia~ 64 (156)
.|+||||++...++.+.+
T Consensus 36 ~v~iaTGR~~~~~~~~~~ 53 (244)
T 1s2o_A 36 YLAYATGRSYHSARELQK 53 (244)
T ss_dssp EEEEECSSCHHHHHHHHH
T ss_pred EEEEEcCCCHHHHHHHHH
Confidence 589999999877655443
No 7
>1j27_A Hypothetical protein TT1725; structural genomics, hypothetical protein from thermus therm HB8, MAD; 1.70A {Thermus thermophilus} SCOP: d.58.50.1
Probab=36.57 E-value=66 Score=22.36 Aligned_cols=60 Identities=12% Similarity=-0.028 Sum_probs=39.9
Q ss_pred HhccCCCHHHHHHHHHhCCCCceEEEecCCCC--CccCEEEEEecCCHHHHHHHHHHHHHHHHH
Q 031636 11 LARKRPSMTSVVNPTFDLKADDVKVIPVGEKC--DWTDYMVIATGRSTWHVKNIAQAIIYKAKQ 72 (156)
Q Consensus 11 ~~~~~~~~~~iv~~L~dkka~DI~ViDv~~~~--~~~Dy~VIaTg~S~rh~~aia~~i~~~lk~ 72 (156)
|+-|+--++.+..-|..+ -||.|-.+.... ..+..-|.+-|+|..|+..+.+.+.+.+..
T Consensus 19 LKeKR~vvksl~~rlr~r--FnVSvAEv~~qD~~q~a~igva~Vs~~~~~~~~~l~~v~~~ie~ 80 (102)
T 1j27_A 19 LKEKRALIKPALERLKAR--FPVSAARLYGLDAWGYEVVGFTLLGNDPAWVEETMRAAARFLAE 80 (102)
T ss_dssp HHHHHHHHHHHHHHHHHH--SSCEEEEEECTTCSSEEEEEEEEEESCHHHHHHHHHHHHHHHHH
T ss_pred hHHhHHHHHHHHHHHhhc--CCeEEEEecCccccceEEEEEEEEECCHHHHHHHHHHHHHHHHh
Confidence 344333333344333333 488888886654 446777888999999999999998877643
No 8
>2rcf_A Unidentified carboxysome polypeptide; cyclic pentamer, structural protein; 2.15A {Halothiobacillus neapolitanus} SCOP: b.40.15.1
Probab=35.02 E-value=51 Score=22.70 Aligned_cols=31 Identities=10% Similarity=0.052 Sum_probs=25.6
Q ss_pred CCCCceEEEecCCCCCccCEEEEEecCCHHHH
Q 031636 28 LKADDVKVIPVGEKCDWTDYMVIATGRSTWHV 59 (156)
Q Consensus 28 kka~DI~ViDv~~~~~~~Dy~VIaTg~S~rh~ 59 (156)
.++.-++++|.-+ +...|++++++|++.|+.
T Consensus 31 ~~g~~~VAvD~vG-AG~Ge~Vlv~~GSaAR~~ 61 (91)
T 2rcf_A 31 PGAPRQVAVDAIG-CIPGDWVLCVGSSAAREA 61 (91)
T ss_dssp TTSCCEEEEESSC-CCTTCEEEEEETTHHHHH
T ss_pred CCCCEEEEEECCC-CCCCCEEEEeCCHHHHhh
Confidence 4577899999765 778999999999988774
No 9
>3f41_A Phytase; tandem repeat, protein tyrosine phosphatase, inositol phosphatase, hydrolase; 2.30A {Mitsuokella multacida}
Probab=33.53 E-value=1.4e+02 Score=27.35 Aligned_cols=120 Identities=8% Similarity=-0.036 Sum_probs=69.7
Q ss_pred CCCHHH---HHHHHHhCCCCceEEEecCCCC-CccC-EEEEE--------ecCCHHHHHHHHHHHHHHHHHHhHHhcccc
Q 031636 15 RPSMTS---VVNPTFDLKADDVKVIPVGEKC-DWTD-YMVIA--------TGRSTWHVKNIAQAIIYKAKQRQREVGAKQ 81 (156)
Q Consensus 15 ~~~~~~---iv~~L~dkka~DI~ViDv~~~~-~~~D-y~VIa--------Tg~S~rh~~aia~~i~~~lk~~~~e~g~~~ 81 (156)
.||.+. |++.|.+.+...|+++||++.+ .+.+ .-|-= +|.|..++.+.-..+...++.. +..
T Consensus 392 QpS~~~l~~il~~L~~~~~~~V~wVDLREEshg~iNG~~vSw~~~~n~~N~G~s~~eve~~E~~ll~~l~g~----~~~- 466 (629)
T 3f41_A 392 EFSNGELQAMLPVLKQQAKGPIYIMDLRQETHGVFNGNAVSWYGLRDWGNLGKNKAEVLKDENSRLNAARGK----SLI- 466 (629)
T ss_dssp CCCHHHHHHHHHHHHHHCCSCEEEEEEECSCEEEETTEEEEEEEGGGCTTTTCCHHHHHHHHHHHHHHHTTS----EEE-
T ss_pred CCCHHHHHHHHHHhhccCCCcEEEEEccccceeeECCcEEEcccCCCcCCCCCCHHHHHHHHHHHHHHhhCC----Cce-
Confidence 355444 5555666678899999999975 1111 11111 6888888877655444443311 110
Q ss_pred cCCCccccCCCCCEEEEecCceEEEecChh-hhhhcChhhhcCCCCCCCCchHHHHHHHH-HHhh
Q 031636 82 MMLPSVQGQDTGKWVIIDSGKVIVHALDEN-ARAYYNLEDLWTSEPSKSATVQDLQKAFV-KVRR 144 (156)
Q Consensus 82 ~~~~~iEG~~~~~WvllD~GdVvVHIft~E-~Re~Y~LE~LW~~a~~~~~~~~~l~~~~~-~~~~ 144 (156)
....-.+.....|..+.... +|+++ ..+-++++-+.-..+....|.++....|. .+++
T Consensus 467 -~~~~~~~~~~~~~~~~~~~~----v~te~e~~~~~Gi~Y~Ripi~D~~aP~~e~id~fl~~v~~ 526 (629)
T 3f41_A 467 -VAELDKDKMPIDPKPVKIES----VMTEQQLVEKNGLHYYRIAATDHIWPSAANIDEFINFTRT 526 (629)
T ss_dssp -EECBCTTSCBSSCCEEECCC----EECHHHHHHHTTCEEEEEEECTTSCCCHHHHHHHHHHHHH
T ss_pred -eeecCCCCccccceecchhh----hcCHHHHHHhCCCEEEEeCCCCCCCCCHHHHHHHHHHHHh
Confidence 00011122233677777665 46776 78899999998877777667666544444 4443
No 10
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=32.16 E-value=28 Score=25.44 Aligned_cols=18 Identities=6% Similarity=0.047 Sum_probs=13.8
Q ss_pred EEEEEecCCHHHHHHHHH
Q 031636 47 YMVIATGRSTWHVKNIAQ 64 (156)
Q Consensus 47 y~VIaTg~S~rh~~aia~ 64 (156)
.+|||||++.+....+.+
T Consensus 42 ~iii~TgR~~~~~~~~~~ 59 (142)
T 2obb_A 42 RLILWSVREGELLDEAIE 59 (142)
T ss_dssp EEEECCSCCHHHHHHHHH
T ss_pred EEEEEeCCCcccHHHHHH
Confidence 689999999877655444
No 11
>3nrd_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.06A {Sinorhizobium meliloti}
Probab=29.94 E-value=40 Score=24.03 Aligned_cols=44 Identities=7% Similarity=0.105 Sum_probs=30.9
Q ss_pred ceEEEecChhhhhhcChhhhcCCCCCCCCchHHHHHHHHHHhhc
Q 031636 102 KVIVHALDENARAYYNLEDLWTSEPSKSATVQDLQKAFVKVRRK 145 (156)
Q Consensus 102 dVvVHIft~E~Re~Y~LE~LW~~a~~~~~~~~~l~~~~~~~~~~ 145 (156)
-+.+||++--.-+...-...|+..+....+.+++++...++|.+
T Consensus 91 HlH~HviPR~~~D~~~~~~~~~~~~~~~~~~~el~~~a~~i~~~ 134 (135)
T 3nrd_A 91 QLHVHVIARREGDPNWPGPVWGFGKAEPWPEEEHRTFAARIMEN 134 (135)
T ss_dssp SCCEEEEEECTTSTTTTSCSTTCSCCCCCCHHHHHHHHHHHHHH
T ss_pred EEEEEEecCCCCCCCCCCcccCCCCCCCCCHHHHHHHHHHHHhh
Confidence 45699998654443323345666677788999999998888763
No 12
>3mmj_A MYO-inositol hexaphosphate phosphohydrolase; phytase, protein tyrosine phosphatase, inositol phosphate, I phosphatase; HET: IHP; 1.60A {Selenomonas ruminantium} SCOP: c.45.1.4 PDB: 1u24_A 1u25_A* 1u26_A* 3o3l_A* 3moz_A* 2pt0_A 2psz_A 3d1h_A 3d1o_A 3d1q_A 2b4u_A 2b4p_A 2b4o_A
Probab=29.78 E-value=2.2e+02 Score=23.63 Aligned_cols=120 Identities=8% Similarity=0.026 Sum_probs=65.5
Q ss_pred CCCHHH---HHHHHHhCCCCceEEEecCCCCC-cc-CEEEEE--------ecCCHHHHHHHHHHHHHHHHHHhHHhcccc
Q 031636 15 RPSMTS---VVNPTFDLKADDVKVIPVGEKCD-WT-DYMVIA--------TGRSTWHVKNIAQAIIYKAKQRQREVGAKQ 81 (156)
Q Consensus 15 ~~~~~~---iv~~L~dkka~DI~ViDv~~~~~-~~-Dy~VIa--------Tg~S~rh~~aia~~i~~~lk~~~~e~g~~~ 81 (156)
.||... |+..|.+.+...|+++||++.+- +. +..|.- +|.|..++...-..+...++.. +.
T Consensus 75 QpS~~gl~~il~~L~~~~~~~vvwVdLREEshg~inG~~vS~~~~~n~~N~G~s~~~v~~~E~~~l~~l~~~----~~-- 148 (314)
T 3mmj_A 75 AFTPAQLKNVAAKLREKTAGPIYDVDLRQESHGYLDGIPVSWYGERDWANLGKSQHEALADERHRLHAALHK----TV-- 148 (314)
T ss_dssp CCCHHHHHHHHHHHHTTCSSCEEEEEEECSCEEEETTEEEEEEEGGGCTTTTCCHHHHHHHHHHHHHHHTTS----EE--
T ss_pred CCCHHHHHHHHHHHhccCCCcEEEEEcCccceEEECCceeecccCCCccCCCCCHHHHHHHHHHHHHHHhcC----Cc--
Confidence 466555 45556666778999999999752 22 333332 5777766655433333332211 11
Q ss_pred cCCCcc-ccCCCCCEEEEecCceEEEecChhhhhhcChhhhcCCCCCCCCchHHHHHHHHHHhh
Q 031636 82 MMLPSV-QGQDTGKWVIIDSGKVIVHALDENARAYYNLEDLWTSEPSKSATVQDLQKAFVKVRR 144 (156)
Q Consensus 82 ~~~~~i-EG~~~~~WvllD~GdVvVHIft~E~Re~Y~LE~LW~~a~~~~~~~~~l~~~~~~~~~ 144 (156)
..... .+.....|..++..++. -.+|..+.++++-+.-.-+....|.++....|...-+
T Consensus 149 -~~~~~~~~~~~~~p~~~~~~~v~---te~e~~~~~Gl~Y~rlPi~D~~aP~~e~id~fl~~v~ 208 (314)
T 3mmj_A 149 -YIAPLGKHKLPEGGEVRRVQKVQ---TEQEVAEAAGMRYFRIAATDHVWPTPENIDRFLAFYR 208 (314)
T ss_dssp -EEECBCGGGCBBSCEEEECCCEE---CHHHHHHHTTCEEEEEEECTTSCCCHHHHHHHHHHHH
T ss_pred -EEEecCcccCCCCCeeechhccC---CHHHHHHhCCCEEEEeCcCCCCCCCHHHHHHHHHHHH
Confidence 01111 11122467888887622 2345667888887776656555666665555554433
No 13
>3ju3_A Probable 2-oxoacid ferredoxin oxidoreductase, ALP; structural genomics, PSI-2, protein structu initiative; 1.90A {Thermoplasma acidophilum}
Probab=29.50 E-value=53 Score=22.76 Aligned_cols=24 Identities=8% Similarity=0.130 Sum_probs=19.6
Q ss_pred ccCEEEEEecCCHHHHHHHHHHHH
Q 031636 44 WTDYMVIATGRSTWHVKNIAQAII 67 (156)
Q Consensus 44 ~~Dy~VIaTg~S~rh~~aia~~i~ 67 (156)
=+|+.|||.|.....+...++.+.
T Consensus 13 g~dv~iv~~Gs~~~~a~eA~~~L~ 36 (118)
T 3ju3_A 13 EADITFVTWGSQKGPILDVIEDLK 36 (118)
T ss_dssp SCSEEEEEEGGGHHHHHHHHHHHH
T ss_pred CCCEEEEEECccHHHHHHHHHHHH
Confidence 369999999999998887776553
No 14
>2c5k_P Vacuolar protein sorting protein 51; protein transport/complex, snare, VFT complex, protein transport, phosphorylation; 2.05A {Saccharomyces cerevisiae}
Probab=28.18 E-value=9.2 Score=20.74 Aligned_cols=8 Identities=63% Similarity=1.298 Sum_probs=4.7
Q ss_pred hhhcChhh
Q 031636 113 RAYYNLED 120 (156)
Q Consensus 113 Re~Y~LE~ 120 (156)
++||+||.
T Consensus 17 keyY~L~~ 24 (26)
T 2c5k_P 17 REFYNLEN 24 (26)
T ss_dssp HHHHHC--
T ss_pred HHHHhhhc
Confidence 57888874
No 15
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=27.75 E-value=35 Score=25.00 Aligned_cols=27 Identities=15% Similarity=-0.061 Sum_probs=22.8
Q ss_pred CEEEEEecCCHHHHHHHHHHHHHHHHHH
Q 031636 46 DYMVIATGRSTWHVKNIAQAIIYKAKQR 73 (156)
Q Consensus 46 Dy~VIaTg~S~rh~~aia~~i~~~lk~~ 73 (156)
.|-|.|. .+..|++.+|..|.+.+++-
T Consensus 18 ~Y~i~g~-e~ee~L~~vA~~vd~km~ei 44 (138)
T 3hnw_A 18 VIKLGGY-ESEEYLQRVASYINNKITEF 44 (138)
T ss_dssp EEEECSC-SCHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCC-CcHHHHHHHHHHHHHHHHHH
Confidence 5777776 47899999999999998775
No 16
>1mp9_A Tata-binding protein; transcription regulation, DNA-binding protein, transcription factor, DNA binding protein; 2.00A {Sulfolobus acidocaldarius} SCOP: d.129.1.1 d.129.1.1
Probab=27.27 E-value=64 Score=24.98 Aligned_cols=59 Identities=12% Similarity=0.076 Sum_probs=39.1
Q ss_pred CCCHHHHHHHHHhC--CC--CceEEEecCCC----CCccCEEEEEec-CCHHHHHHHHHHHHHHHHHH
Q 031636 15 RPSMTSVVNPTFDL--KA--DDVKVIPVGEK----CDWTDYMVIATG-RSTWHVKNIAQAIIYKAKQR 73 (156)
Q Consensus 15 ~~~~~~iv~~L~dk--ka--~DI~ViDv~~~----~~~~Dy~VIaTg-~S~rh~~aia~~i~~~lk~~ 73 (156)
..+++.++..+.+- .- --=+++.+++. .-|..--|+||| +|..+++..+..+.+.+++.
T Consensus 27 ~ldL~~la~~~~n~eY~P~~fpgli~Rl~~Pk~t~lIF~SGKiv~TGakS~e~a~~a~~~i~~~L~~l 94 (198)
T 1mp9_A 27 TLDLYAMERSVPNVEYDPDQFPGLIFRLESPKITSLIFKSGKMVVTGAKSTDELIKAVKRIIKTLKKY 94 (198)
T ss_dssp CCCHHHHHHHSTTCBCCTTTCSSEEEEETTTTEEEEECTTSEEEEECCSSHHHHHHHHHHHHHHHHHT
T ss_pred cccHHHHHhhCCCCEECCccccceEEEcCCCceEEEEeCCCeEEEeccCCHHHHHHHHHHHHHHHHHc
Confidence 35567776655331 11 12356666543 225677789999 99999999999988888775
No 17
>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10
Probab=26.43 E-value=47 Score=25.33 Aligned_cols=19 Identities=32% Similarity=0.517 Sum_probs=14.4
Q ss_pred EEEEEecCCHHHHHHHHHH
Q 031636 47 YMVIATGRSTWHVKNIAQA 65 (156)
Q Consensus 47 y~VIaTg~S~rh~~aia~~ 65 (156)
.|+||||++...+..+...
T Consensus 36 ~v~iaTGR~~~~~~~~~~~ 54 (268)
T 1nf2_A 36 YVVFASGRMLVSTLNVEKK 54 (268)
T ss_dssp EEEEECSSCHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHH
Confidence 5699999998877665543
No 18
>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0
Probab=26.40 E-value=29 Score=26.14 Aligned_cols=21 Identities=10% Similarity=0.218 Sum_probs=15.7
Q ss_pred CEEEEEecCCHHHHHHHHHHH
Q 031636 46 DYMVIATGRSTWHVKNIAQAI 66 (156)
Q Consensus 46 Dy~VIaTg~S~rh~~aia~~i 66 (156)
=.++||||+|.|....++..+
T Consensus 41 i~v~l~Tgr~~r~~~~~~~~l 61 (268)
T 3qgm_A 41 KKIIFVSNNSTRSRRILLERL 61 (268)
T ss_dssp CEEEEEECCSSSCHHHHHHHH
T ss_pred CeEEEEeCcCCCCHHHHHHHH
Confidence 368999998888777665544
No 19
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=26.31 E-value=1.4e+02 Score=20.11 Aligned_cols=34 Identities=15% Similarity=0.219 Sum_probs=25.3
Q ss_pred HHHHHHHhCCCCceEEEecCCCC----CccCEEEEEecC
Q 031636 20 SVVNPTFDLKADDVKVIPVGEKC----DWTDYMVIATGR 54 (156)
Q Consensus 20 ~iv~~L~dkka~DI~ViDv~~~~----~~~Dy~VIaTg~ 54 (156)
.|++.|.+. +.++.++|+.+.. .-+|.+||+|..
T Consensus 18 ~ia~~l~~~-g~~v~~~~~~~~~~~~l~~~d~iiig~pt 55 (138)
T 5nul_A 18 LIAKGIIES-GKDVNTINVSDVNIDELLNEDILILGCSA 55 (138)
T ss_dssp HHHHHHHHT-TCCCEEEEGGGCCHHHHTTCSEEEEEECC
T ss_pred HHHHHHHHC-CCeEEEEEhhhCCHHHHhhCCEEEEEcCc
Confidence 677777665 5589999997642 346999999875
No 20
>1ytb_A Protein (tata binding protein (TBP)); protein-DNA complex, transcription/DNA complex; HET: DNA; 1.80A {Saccharomyces cerevisiae} SCOP: d.129.1.1 d.129.1.1 PDB: 1ngm_A* 1tba_B 1nh2_A* 1ytf_A* 1tbp_A 1qna_A* 1qn3_A* 1qn5_A* 1qn6_A* 1qn7_A* 1qn8_A* 1qn9_A* 1qn4_A* 1qnb_A* 1qnc_A* 1qne_A* 1vok_A 1vol_B* 1vto_A* 1vtl_E* ...
Probab=25.78 E-value=75 Score=24.21 Aligned_cols=31 Identities=13% Similarity=0.080 Sum_probs=24.5
Q ss_pred ccCEEEEEec-CCHHHHHHHHHHHHHHHHHHh
Q 031636 44 WTDYMVIATG-RSTWHVKNIAQAIIYKAKQRQ 74 (156)
Q Consensus 44 ~~Dy~VIaTg-~S~rh~~aia~~i~~~lk~~~ 74 (156)
|..-=|+||| +|...++..++.+.+.+++.+
T Consensus 56 F~SGKiv~TGaks~e~~~~a~~~i~~~L~~lg 87 (180)
T 1ytb_A 56 FASGKMVVTGAKSEDDSKLASRKYARIIQKIG 87 (180)
T ss_dssp CTTSEEEEEEESSHHHHHHHHHHHHHHHHHHT
T ss_pred ECCCeEEEEecCCHHHHHHHHHHHHHHHHHcC
Confidence 4455678887 899999999998888887753
No 21
>3ohe_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.20A {Marinobacter aquaeolei}
Probab=25.35 E-value=55 Score=23.42 Aligned_cols=47 Identities=13% Similarity=0.145 Sum_probs=31.8
Q ss_pred ecC----ceEEEecChhhhhhcChhhhcCCCCCCCCchHHHHHHHHHHhhc
Q 031636 99 DSG----KVIVHALDENARAYYNLEDLWTSEPSKSATVQDLQKAFVKVRRK 145 (156)
Q Consensus 99 D~G----dVvVHIft~E~Re~Y~LE~LW~~a~~~~~~~~~l~~~~~~~~~~ 145 (156)
+.| -+.+||++--.-+...-.-.|+..+....+.+++.+...++|.+
T Consensus 82 ~aGq~V~HlH~HviPR~~~D~~~p~~vw~~~~~~~~~~eel~~~~~~ir~~ 132 (137)
T 3ohe_A 82 ALGNMVPQLHLHHIVRYQGDPAWPGPVWGKQPPVPYTEEQQASVKAKLQPL 132 (137)
T ss_dssp ECCSSCCSCCEEEEEECTTSTTTTSCCTTSSCCCCCCHHHHHHHHHHHHHH
T ss_pred eccCcCCEEEEEEeCCCCCCCCCCcccccCCCCCCCCHHHHHHHHHHHHHH
Confidence 566 45699998644433222235666567788889999999888864
No 22
>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10
Probab=25.25 E-value=41 Score=25.95 Aligned_cols=18 Identities=0% Similarity=0.215 Sum_probs=14.1
Q ss_pred EEEEEecCCHHHHHHHHH
Q 031636 47 YMVIATGRSTWHVKNIAQ 64 (156)
Q Consensus 47 y~VIaTg~S~rh~~aia~ 64 (156)
.|+||||++...++.+.+
T Consensus 44 ~~~iaTGR~~~~~~~~~~ 61 (275)
T 1xvi_A 44 PVILCSSKTSAEMLYLQK 61 (275)
T ss_dssp CEEEECSSCHHHHHHHHH
T ss_pred eEEEEcCCCHHHHHHHHH
Confidence 588999999887766544
No 23
>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0
Probab=25.19 E-value=32 Score=25.92 Aligned_cols=20 Identities=20% Similarity=0.260 Sum_probs=14.6
Q ss_pred EEEEEecCCHHHHHHHHHHH
Q 031636 47 YMVIATGRSTWHVKNIAQAI 66 (156)
Q Consensus 47 y~VIaTg~S~rh~~aia~~i 66 (156)
.++||||+|.|....++..+
T Consensus 40 ~v~laTgrs~r~~~~~~~~l 59 (266)
T 3pdw_A 40 PYLFVTNNSSRTPKQVADKL 59 (266)
T ss_dssp CEEEEESCCSSCHHHHHHHH
T ss_pred eEEEEeCCCCCCHHHHHHHH
Confidence 46899998888776665544
No 24
>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A
Probab=24.73 E-value=54 Score=24.66 Aligned_cols=18 Identities=11% Similarity=0.032 Sum_probs=14.2
Q ss_pred EEEEEecCCHHHHHHHHH
Q 031636 47 YMVIATGRSTWHVKNIAQ 64 (156)
Q Consensus 47 y~VIaTg~S~rh~~aia~ 64 (156)
.++||||++...++.++.
T Consensus 40 ~~~i~TGr~~~~~~~~~~ 57 (227)
T 1l6r_A 40 TVSLLSGNVIPVVYALKI 57 (227)
T ss_dssp EEEEECSSCHHHHHHHHH
T ss_pred EEEEECCCCcHHHHHHHH
Confidence 588999999888766554
No 25
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=24.54 E-value=1.3e+02 Score=21.32 Aligned_cols=36 Identities=11% Similarity=0.062 Sum_probs=26.3
Q ss_pred HHHHHHHhCCCCceEEEecCCCC--C------ccCEEEEEecCCH
Q 031636 20 SVVNPTFDLKADDVKVIPVGEKC--D------WTDYMVIATGRST 56 (156)
Q Consensus 20 ~iv~~L~dkka~DI~ViDv~~~~--~------~~Dy~VIaTg~S~ 56 (156)
.|++.|.+. +-++.++|+.+.. . -+|.+||+|..-.
T Consensus 20 ~ia~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~d~ii~Gspty~ 63 (161)
T 3hly_A 20 AIGRGLVKT-GVAVEMVDLRAVDPQELIEAVSSARGIVLGTPPSQ 63 (161)
T ss_dssp HHHHHHHHT-TCCEEEEETTTCCHHHHHHHHHHCSEEEEECCBSS
T ss_pred HHHHHHHhC-CCeEEEEECCCCCHHHHHHHHHhCCEEEEEcCCcC
Confidence 677777664 4579999998742 1 2799999998654
No 26
>1vdh_A Muconolactone isomerase-like protein; beta barrel, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: d.58.4.10
Probab=24.51 E-value=2.7e+02 Score=22.28 Aligned_cols=38 Identities=5% Similarity=-0.037 Sum_probs=31.9
Q ss_pred CCCCceEEEecCCCCCccCEEEEEecCCHHHHHHHHHHHH
Q 031636 28 LKADDVKVIPVGEKCDWTDYMVIATGRSTWHVKNIAQAII 67 (156)
Q Consensus 28 kka~DI~ViDv~~~~~~~Dy~VIaTg~S~rh~~aia~~i~ 67 (156)
.+.....+.|+.+.. +|+|+...+.+..+++++-..+.
T Consensus 57 ~~~~~~~~Y~v~G~r--ADlm~w~~~~~~~~Lq~~~~~~~ 94 (249)
T 1vdh_A 57 AGQGSYGIYQVVGHK--ADLLFLNLRPGLDPLLEAEARLS 94 (249)
T ss_dssp TTSCEEEEEEECSTT--CSEEEEEEESSHHHHHHHHHHHH
T ss_pred CCceEEEEEEecCCc--ccEEEEEeCCCHHHHHHHHHHHH
Confidence 556677799999887 99999999999999987766664
No 27
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=24.39 E-value=1.9e+02 Score=21.14 Aligned_cols=37 Identities=19% Similarity=0.218 Sum_probs=29.0
Q ss_pred CCceEEEecCCC--------CCccCEEEEEecCCHHHHHHHHHHH
Q 031636 30 ADDVKVIPVGEK--------CDWTDYMVIATGRSTWHVKNIAQAI 66 (156)
Q Consensus 30 a~DI~ViDv~~~--------~~~~Dy~VIaTg~S~rh~~aia~~i 66 (156)
.-|+++||.... -..+|++||.+-.+...+.++...+
T Consensus 118 ~yD~viiD~p~~~~~~~~~~l~~ad~viiv~~~~~~~~~~~~~~~ 162 (245)
T 3ea0_A 118 FYDYIIVDFGASIDHVGVWVLEHLDELCIVTTPSLQSLRRAGQLL 162 (245)
T ss_dssp HCSEEEEEEESSCCTTHHHHGGGCSEEEEEECSSHHHHHHHHHHH
T ss_pred hCCEEEEeCCCCCchHHHHHHHHCCEEEEEecCcHHHHHHHHHHH
Confidence 579999999653 2347999999999988887766644
No 28
>1t0t_V APC35880; pentamer, icosahedral, structural genomics, protein structure initiative, MCSG, PSI; HET: P33; 1.75A {Geobacillus stearothermophilus} SCOP: d.58.4.10
Probab=23.57 E-value=2.8e+02 Score=22.12 Aligned_cols=38 Identities=13% Similarity=0.090 Sum_probs=31.6
Q ss_pred CCCCceEEEecCCCCCccCEEEEEecCCHHHHHHHHHHHH
Q 031636 28 LKADDVKVIPVGEKCDWTDYMVIATGRSTWHVKNIAQAII 67 (156)
Q Consensus 28 kka~DI~ViDv~~~~~~~Dy~VIaTg~S~rh~~aia~~i~ 67 (156)
.+.....+.|+.+.. +|+|+...+.+..+++++-..++
T Consensus 53 ~~~~~~~~Y~v~G~r--aDlm~w~~~~~~~~lq~~~~~~~ 90 (248)
T 1t0t_V 53 EKQGSHAVYTIVGQK--ADILFMILRPTLDELHEIETALN 90 (248)
T ss_dssp TTSCEEEEEEECSSS--CSEEEEEEESSHHHHHHHHHHHH
T ss_pred CCceEEEEEEecCCc--ccEEEEEeCCCHHHHHHHHHHHH
Confidence 555677799999877 99999999999999987766654
No 29
>2vxh_A Chlorite dismutase; heme-based enzyme, oxidoreductase, chlorate respiration, molecular oxygen production; HET: HEM; 2.10A {Azospira oryzae} PDB: 3q09_A* 3q08_A* 3m2s_A* 3m2q_A*
Probab=23.49 E-value=2.9e+02 Score=22.15 Aligned_cols=49 Identities=8% Similarity=-0.063 Sum_probs=37.2
Q ss_pred HHHHHHHHhCCC-CceEEEecCCCCCccCEEEEEecCCHHHHHHHHHHHH
Q 031636 19 TSVVNPTFDLKA-DDVKVIPVGEKCDWTDYMVIATGRSTWHVKNIAQAII 67 (156)
Q Consensus 19 ~~iv~~L~dkka-~DI~ViDv~~~~~~~Dy~VIaTg~S~rh~~aia~~i~ 67 (156)
.++..+++..+. ...-..+++....-+|+|+...+.+..+++++-..++
T Consensus 49 ~e~~~~~~~~~~~~~~~~y~~~glr~dADlm~w~~~~~~e~lq~~~~~f~ 98 (251)
T 2vxh_A 49 EEVKKLIEKHKDNVLVDLYLTRGLETNSDFFFRINAYDLAKAQTFMREFR 98 (251)
T ss_dssp HHHHHHHHHTTTTCEEEEEECTTTCSSCSEEEEEEESSHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhccceeeEEEEEeecCCccEEEEEeCCCHHHHHHHHHHHH
Confidence 355555655443 3345889999999999999999999999988766664
No 30
>3fkq_A NTRC-like two-domain protein; RER070207001320, structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: ATP 2PE; 2.10A {Eubacterium rectale}
Probab=23.35 E-value=2.7e+02 Score=22.45 Aligned_cols=49 Identities=6% Similarity=0.049 Sum_probs=34.8
Q ss_pred HHHHHHHHHhCCCCceEEEecCCC--------CCccCEEEEEecCCHHHHHHHHHHH
Q 031636 18 MTSVVNPTFDLKADDVKVIPVGEK--------CDWTDYMVIATGRSTWHVKNIAQAI 66 (156)
Q Consensus 18 ~~~iv~~L~dkka~DI~ViDv~~~--------~~~~Dy~VIaTg~S~rh~~aia~~i 66 (156)
+..+.+.+.....-|+++||.+.- ...+|++|+.+-.+..-+.++.+..
T Consensus 247 ~~~ll~~l~~~~~yD~VIID~p~~~~~~~~~~l~~aD~vivv~~~~~~s~~~l~~~~ 303 (373)
T 3fkq_A 247 IDTLIGNIQGMDNYDEIIVDLPFSLEIEKLKLLSKAWRIIVVNDGSQLSNYKFMRAY 303 (373)
T ss_dssp HHHHHHHHHHTSCCSEEEEECCCCCCHHHHHHHTTCSEEEEEECCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCEEEEeCCCCCCHHHHHHHHHCCEEEEEecCCchHHHHHHHHH
Confidence 445566666556789999999753 2358999999998887666655533
No 31
>3nn1_A Chlorite dismutase; ferredoxin like fold, chlorite dismutation, periplasmatic, oxidoreductase; HET: HEM; 1.85A {Candidatus nitrospira defluvii} PDB: 3nn2_A* 3nn4_A* 3nn3_A*
Probab=22.82 E-value=2.9e+02 Score=21.96 Aligned_cols=49 Identities=14% Similarity=0.055 Sum_probs=38.3
Q ss_pred HHHHHHHHhC-CCCceEEEecCCCCCccCEEEEEecCCHHHHHHHHHHHH
Q 031636 19 TSVVNPTFDL-KADDVKVIPVGEKCDWTDYMVIATGRSTWHVKNIAQAII 67 (156)
Q Consensus 19 ~~iv~~L~dk-ka~DI~ViDv~~~~~~~Dy~VIaTg~S~rh~~aia~~i~ 67 (156)
.++..+++.. ......+.|+.+...-+|+|+.-.+.+..+++++-..++
T Consensus 41 ~e~~~~l~~~~~~~~~~~Y~v~G~radaDlm~w~~~~~~~~lq~~~~~f~ 90 (241)
T 3nn1_A 41 AEVKGLVEQWSGKILVESYLLRGLSDHADLMFRVHARTLSDTQQFLSAFM 90 (241)
T ss_dssp HHHHHHHHHHTTTCEEEEEECTTTSTTCCEEEEEEESSHHHHHHHHHHHH
T ss_pred HHHHHHHHhcccceEEEEEEeecccCCCCEEEEEeCCCHHHHHHHHHHHH
Confidence 3555555542 235678899999999999999999999999988777664
No 32
>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A
Probab=22.62 E-value=56 Score=24.72 Aligned_cols=18 Identities=0% Similarity=0.091 Sum_probs=14.0
Q ss_pred EEEEEecCCHHHHHHHHH
Q 031636 47 YMVIATGRSTWHVKNIAQ 64 (156)
Q Consensus 47 y~VIaTg~S~rh~~aia~ 64 (156)
.++||||++...+..+..
T Consensus 35 ~~~i~Tgr~~~~~~~~~~ 52 (249)
T 2zos_A 35 EIIFNSSKTRAEQEYYRK 52 (249)
T ss_dssp EEEEBCSSCHHHHHHHHH
T ss_pred EEEEEeCCCHHHHHHHHH
Confidence 689999999887665544
No 33
>2wp4_A Molybdopterin-converting factor subunit 2 1; transferase; 2.49A {Mycobacterium tuberculosis}
Probab=22.14 E-value=1.1e+02 Score=22.45 Aligned_cols=56 Identities=18% Similarity=0.082 Sum_probs=36.0
Q ss_pred HHHHHHHHHhC-CCCceEEEecCCCCCccC--EEEEEecCCHHHHHHHHHHHHHHHHHH
Q 031636 18 MTSVVNPTFDL-KADDVKVIPVGEKCDWTD--YMVIATGRSTWHVKNIAQAIIYKAKQR 73 (156)
Q Consensus 18 ~~~iv~~L~dk-ka~DI~ViDv~~~~~~~D--y~VIaTg~S~rh~~aia~~i~~~lk~~ 73 (156)
++.|++-+..+ ...+|.++-=-+.-...| .+|.+++...+..-..++.+.+.+|..
T Consensus 69 l~~I~~ea~~r~~~~~v~i~HR~G~l~vGe~~v~VaVss~HR~~Af~A~~~~iD~lK~~ 127 (147)
T 2wp4_A 69 LMSIIGRCEDKAEGVRVAVAHRTGELQIGDAAVVIGASAPHRAEAFDAARMCIELLKQE 127 (147)
T ss_dssp HHHHHHHHHTSSTTCEEEEEEECEEECTTCEEEEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCceEEEEEEEcccCCCCeEEEEEEeccCHHHHHHHHHHHHHHHHhh
Confidence 44555555555 346777765444333333 556667777778888899999999986
No 34
>3m21_A Probable tautomerase HP_0924; 4-oxalocrotonate tautomerase, catalytic proline, hexamer, BE beta, isomerase; 1.90A {Helicobacter pylori} PDB: 2orm_A
Probab=22.10 E-value=1.4e+02 Score=18.03 Aligned_cols=21 Identities=5% Similarity=0.047 Sum_probs=19.0
Q ss_pred cCCHHHHHHHHHHHHHHHHHH
Q 031636 53 GRSTWHVKNIAQAIIYKAKQR 73 (156)
Q Consensus 53 g~S~rh~~aia~~i~~~lk~~ 73 (156)
|+|.-|-++|++.|.+.+.+.
T Consensus 13 grs~eqK~~l~~~lt~~l~~~ 33 (67)
T 3m21_A 13 GPTNEQKQQLIEGVSDLMVKV 33 (67)
T ss_dssp BSCHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHH
Confidence 899999999999999988765
No 35
>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10
Probab=21.76 E-value=69 Score=25.14 Aligned_cols=21 Identities=24% Similarity=0.275 Sum_probs=16.3
Q ss_pred CEEEEEecCCHHHHHHHH--HHH
Q 031636 46 DYMVIATGRSTWHVKNIA--QAI 66 (156)
Q Consensus 46 Dy~VIaTg~S~rh~~aia--~~i 66 (156)
-.|+||||++...+..+. +.+
T Consensus 62 i~v~iaTGR~~~~~~~~~~~~~l 84 (301)
T 2b30_A 62 YMVSICTGRSKVGILSAFGEENL 84 (301)
T ss_dssp CEEEEECSSCHHHHHHHHCHHHH
T ss_pred CEEEEEcCCCHHHHHHHhhHHhh
Confidence 479999999988777666 544
No 36
>2omd_A Molybdopterin-converting factor subunit 2; MOAE, coenzyme biosynthesis, structural genomics, NPPSFA; 2.00A {Aquifex aeolicus}
Probab=21.74 E-value=86 Score=23.30 Aligned_cols=56 Identities=14% Similarity=0.144 Sum_probs=36.5
Q ss_pred HHHHHHHHHhC-CCCceEEEecCCCC--CccCEEEEEecCCHHHHHHHHHHHHHHHHHH
Q 031636 18 MTSVVNPTFDL-KADDVKVIPVGEKC--DWTDYMVIATGRSTWHVKNIAQAIIYKAKQR 73 (156)
Q Consensus 18 ~~~iv~~L~dk-ka~DI~ViDv~~~~--~~~Dy~VIaTg~S~rh~~aia~~i~~~lk~~ 73 (156)
++.|++-+..+ ...+|.|+-=-+.- .-.=.+|.+++...+..-..++.+.+.+|..
T Consensus 67 l~~I~~ea~~r~~l~~v~v~HR~G~l~vGe~iv~VaVss~HR~~Af~A~~~~iD~lK~~ 125 (154)
T 2omd_A 67 MEKIRQETIEKFGVKEVFIHHRLGLVKIGEPSFLVLAVGGHREETFKACRYAVDETKKR 125 (154)
T ss_dssp HHHHHHHHHHHHCCSEEEEEEECEEEETTSCCEEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCceEEEEEEEcccCCCCeEEEEEEeccCHHHHHHHHHHHHHHHHhh
Confidence 44555544444 45677776433322 2234677778887888888899999999986
No 37
>3hlu_A Uncharacterized protein DUF2179; alpha-beta half sandwich, structural genomics, PSI-2, protei structure initiative; 2.65A {Eubacterium ventriosum}
Probab=21.43 E-value=1.9e+02 Score=19.39 Aligned_cols=50 Identities=6% Similarity=-0.022 Sum_probs=38.6
Q ss_pred CHHHHHHHHHhCCCCceEEEecCCCCCccCEEEEEecCCHHHHHHHHHHH
Q 031636 17 SMTSVVNPTFDLKADDVKVIPVGEKCDWTDYMVIATGRSTWHVKNIAQAI 66 (156)
Q Consensus 17 ~~~~iv~~L~dkka~DI~ViDv~~~~~~~Dy~VIaTg~S~rh~~aia~~i 66 (156)
..++|++.+.+....-+++++-.+-=+-.+.-||-+.-+.+++..|-+.|
T Consensus 17 ~~eeI~~~I~~~l~rGvT~~~g~G~Ys~~~~~vl~~Vv~r~e~~~l~~~I 66 (96)
T 3hlu_A 17 KRKIIADRMLQELDLGVTMLQAVGAYKNNETEVIMCVMRKATLVKVRNLL 66 (96)
T ss_dssp THHHHHHHHHHHSCCCCEEEECEESSSSSCCEEEEEEECHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhcCCCEEEEEEEEcccCCCEEEEEEEecHHHHHHHHHHH
Confidence 35788999998888999999887643344777888888899987766655
No 38
>3i24_A HIT family hydrolase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 1.50A {Vibrio fischeri ES114}
Probab=21.26 E-value=65 Score=23.52 Aligned_cols=45 Identities=9% Similarity=0.082 Sum_probs=32.1
Q ss_pred ceEEEecChhhhhhcChhhhcCCCCCCCCchHHHHHHHHHHhhcc
Q 031636 102 KVIVHALDENARAYYNLEDLWTSEPSKSATVQDLQKAFVKVRRKN 146 (156)
Q Consensus 102 dVvVHIft~E~Re~Y~LE~LW~~a~~~~~~~~~l~~~~~~~~~~~ 146 (156)
-+.+||++--.-+...-.-.|+..+....+.+++.+...++|.+=
T Consensus 89 HlH~HvIPR~~~D~~~~~~vw~~~~~~~~~~eel~~~a~kIr~~L 133 (149)
T 3i24_A 89 QLHIHHIARFTTDVAWPGPVWGNTTGVIRAQSSQTQLVDLLRDKL 133 (149)
T ss_dssp SCCEEEEEECTTSTTTTSCSTTCSCCCBCCHHHHHHHHHHHHHHH
T ss_pred EEEEEEeCCccCCCCCCcceecCCCCCCCCHHHHHHHHHHHHHHH
Confidence 677999986544433233567766667788899999999998764
No 39
>2z1c_A Hydrogenase expression/formation protein HYPC; [NIFE] hydrogenase maturation, OB-fold, chaperone, metal BIN protein; HET: PG4; 1.80A {Thermococcus kodakarensis} SCOP: b.40.14.1
Probab=20.73 E-value=46 Score=22.03 Aligned_cols=26 Identities=27% Similarity=0.512 Sum_probs=16.5
Q ss_pred CCCCCEEEEecCceEEEecChhhhhh
Q 031636 90 QDTGKWVIIDSGKVIVHALDENARAY 115 (156)
Q Consensus 90 ~~~~~WvllD~GdVvVHIft~E~Re~ 115 (156)
..-|+|+|+..|-.+=-|=.+|+++-
T Consensus 36 ~~vGD~VLVH~GfAi~~ideeeA~et 61 (75)
T 2z1c_A 36 TKPGDWVIVHTGFAIEKLDEKKAMEI 61 (75)
T ss_dssp CCTTCEEEEETTEEEEEECHHHHHHH
T ss_pred CCCCCEEEEecchhhhhCCHHHHHHH
Confidence 45689999999855444444444443
No 40
>1t3u_A Conserved hypothetical protein; NYSGXRC, unknown ORF, COG3027, PSI, protein structure initiative; 2.50A {Pseudomonas aeruginosa PAO1} SCOP: d.244.1.1 PDB: 1w2e_A
Probab=20.59 E-value=72 Score=21.60 Aligned_cols=28 Identities=11% Similarity=0.147 Sum_probs=24.3
Q ss_pred CEEEEEecCCHHHHHHHHHHHHHHHHHH
Q 031636 46 DYMVIATGRSTWHVKNIAQAIIYKAKQR 73 (156)
Q Consensus 46 Dy~VIaTg~S~rh~~aia~~i~~~lk~~ 73 (156)
+|-|.|...+..|++.+|..|.+.+++.
T Consensus 15 ~Y~l~~~~~~ee~l~~aA~~vd~~~~~i 42 (104)
T 1t3u_A 15 EYCINCPDDERANLESAARYLDGKMREI 42 (104)
T ss_dssp EEEECCCTTTHHHHHHHHHHHHHHHHHH
T ss_pred EEEeeCCCCCHHHHHHHHHHHHHHHHHH
Confidence 5777787788999999999999998875
No 41
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=20.04 E-value=1.3e+02 Score=21.52 Aligned_cols=40 Identities=15% Similarity=0.130 Sum_probs=27.5
Q ss_pred HHHHHHHhCCCCceEEEecCCC-CC--------ccCEEEEEecCCHHHHH
Q 031636 20 SVVNPTFDLKADDVKVIPVGEK-CD--------WTDYMVIATGRSTWHVK 60 (156)
Q Consensus 20 ~iv~~L~dkka~DI~ViDv~~~-~~--------~~Dy~VIaTg~S~rh~~ 60 (156)
.|++.|.+. +-++.++|+... .. -+|.+||+|..-.-.+.
T Consensus 24 ~ia~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~d~ii~Gspty~g~~p 72 (159)
T 3fni_A 24 AIINGITKT-GVGVDVVDLGAAVDLQELRELVGRCTGLVIGMSPAASAAS 72 (159)
T ss_dssp HHHHHHHHT-TCEEEEEESSSCCCHHHHHHHHHTEEEEEEECCBTTSHHH
T ss_pred HHHHHHHHC-CCeEEEEECcCcCCHHHHHHHHHhCCEEEEEcCcCCCCcc
Confidence 667777664 458999999865 21 16889999887554443
Done!