BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 031640
         (156 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|1GME|A Chain A, Crystal Structure And Assembly Of An Eukaryotic Small Heat
           Shock Protein
 pdb|1GME|B Chain B, Crystal Structure And Assembly Of An Eukaryotic Small Heat
           Shock Protein
 pdb|1GME|C Chain C, Crystal Structure And Assembly Of An Eukaryotic Small Heat
           Shock Protein
 pdb|1GME|D Chain D, Crystal Structure And Assembly Of An Eukaryotic Small Heat
           Shock Protein
          Length = 151

 Score =  103 bits (258), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 58/110 (52%), Positives = 80/110 (72%), Gaps = 2/110 (1%)

Query: 46  TRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAV 105
            R+DW +TPE HVFKADL G  K +VKVE+EDG VL +SGE+  EKE++ D+ HR+E + 
Sbjct: 44  ARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSS 103

Query: 106 GKFSRRFQLPENAMVDRITAHIANSTLTVTVPKKDIKKHHGHSRSIKITG 155
           GKF RRF+L E+A V+ + A + N  LTVTVPK ++KK     ++I+I+G
Sbjct: 104 GKFVRRFRLLEDAKVEEVKAGLENGVLTVTVPKAEVKKP--EVKAIQISG 151


>pdb|2BYU|A Chain A, Negative Stain Em Reconstruction Of M.Tuberculosis
           Acr1(Hsp 16.3) Fitted With Wheat Shsp Dimer
 pdb|2BYU|B Chain B, Negative Stain Em Reconstruction Of M.Tuberculosis
           Acr1(Hsp 16.3) Fitted With Wheat Shsp Dimer
 pdb|2BYU|C Chain C, Negative Stain Em Reconstruction Of M.Tuberculosis
           Acr1(Hsp 16.3) Fitted With Wheat Shsp Dimer
 pdb|2BYU|D Chain D, Negative Stain Em Reconstruction Of M.Tuberculosis
           Acr1(Hsp 16.3) Fitted With Wheat Shsp Dimer
 pdb|2BYU|E Chain E, Negative Stain Em Reconstruction Of M.Tuberculosis
           Acr1(Hsp 16.3) Fitted With Wheat Shsp Dimer
 pdb|2BYU|F Chain F, Negative Stain Em Reconstruction Of M.Tuberculosis
           Acr1(Hsp 16.3) Fitted With Wheat Shsp Dimer
 pdb|2BYU|G Chain G, Negative Stain Em Reconstruction Of M.Tuberculosis
           Acr1(Hsp 16.3) Fitted With Wheat Shsp Dimer
 pdb|2BYU|H Chain H, Negative Stain Em Reconstruction Of M.Tuberculosis
           Acr1(Hsp 16.3) Fitted With Wheat Shsp Dimer
 pdb|2BYU|I Chain I, Negative Stain Em Reconstruction Of M.Tuberculosis
           Acr1(Hsp 16.3) Fitted With Wheat Shsp Dimer
 pdb|2BYU|J Chain J, Negative Stain Em Reconstruction Of M.Tuberculosis
           Acr1(Hsp 16.3) Fitted With Wheat Shsp Dimer
 pdb|2BYU|K Chain K, Negative Stain Em Reconstruction Of M.Tuberculosis
           Acr1(Hsp 16.3) Fitted With Wheat Shsp Dimer
 pdb|2BYU|L Chain L, Negative Stain Em Reconstruction Of M.Tuberculosis
           Acr1(Hsp 16.3) Fitted With Wheat Shsp Dimer
          Length = 101

 Score = 98.2 bits (243), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 54/97 (55%), Positives = 71/97 (73%)

Query: 46  TRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAV 105
            R+DW +TPE HVFKADL G  K +VKVE+EDG VL +SGE+  EKE++ D+ HR+E + 
Sbjct: 2   ARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSS 61

Query: 106 GKFSRRFQLPENAMVDRITAHIANSTLTVTVPKKDIK 142
           GKF RRF+L E+A V+ + A + N  LTVTVPK  I+
Sbjct: 62  GKFVRRFRLLEDAKVEEVKAGLENGVLTVTVPKAAIQ 98


>pdb|2H50|A Chain A, Multiple Distinct Assemblies Reveal Conformational
           Flexibility In The Small Heat Shock Protein Hsp26
 pdb|2H50|B Chain B, Multiple Distinct Assemblies Reveal Conformational
           Flexibility In The Small Heat Shock Protein Hsp26
 pdb|2H50|C Chain C, Multiple Distinct Assemblies Reveal Conformational
           Flexibility In The Small Heat Shock Protein Hsp26
 pdb|2H50|D Chain D, Multiple Distinct Assemblies Reveal Conformational
           Flexibility In The Small Heat Shock Protein Hsp26
 pdb|2H50|E Chain E, Multiple Distinct Assemblies Reveal Conformational
           Flexibility In The Small Heat Shock Protein Hsp26
 pdb|2H50|F Chain F, Multiple Distinct Assemblies Reveal Conformational
           Flexibility In The Small Heat Shock Protein Hsp26
 pdb|2H50|G Chain G, Multiple Distinct Assemblies Reveal Conformational
           Flexibility In The Small Heat Shock Protein Hsp26
 pdb|2H50|H Chain H, Multiple Distinct Assemblies Reveal Conformational
           Flexibility In The Small Heat Shock Protein Hsp26
 pdb|2H50|I Chain I, Multiple Distinct Assemblies Reveal Conformational
           Flexibility In The Small Heat Shock Protein Hsp26
 pdb|2H50|J Chain J, Multiple Distinct Assemblies Reveal Conformational
           Flexibility In The Small Heat Shock Protein Hsp26
 pdb|2H50|K Chain K, Multiple Distinct Assemblies Reveal Conformational
           Flexibility In The Small Heat Shock Protein Hsp26
 pdb|2H50|L Chain L, Multiple Distinct Assemblies Reveal Conformational
           Flexibility In The Small Heat Shock Protein Hsp26
 pdb|2H50|M Chain M, Multiple Distinct Assemblies Reveal Conformational
           Flexibility In The Small Heat Shock Protein Hsp26
 pdb|2H50|N Chain N, Multiple Distinct Assemblies Reveal Conformational
           Flexibility In The Small Heat Shock Protein Hsp26
 pdb|2H50|O Chain O, Multiple Distinct Assemblies Reveal Conformational
           Flexibility In The Small Heat Shock Protein Hsp26
 pdb|2H50|P Chain P, Multiple Distinct Assemblies Reveal Conformational
           Flexibility In The Small Heat Shock Protein Hsp26
 pdb|2H50|Q Chain Q, Multiple Distinct Assemblies Reveal Conformational
           Flexibility In The Small Heat Shock Protein Hsp26
 pdb|2H50|R Chain R, Multiple Distinct Assemblies Reveal Conformational
           Flexibility In The Small Heat Shock Protein Hsp26
 pdb|2H50|S Chain S, Multiple Distinct Assemblies Reveal Conformational
           Flexibility In The Small Heat Shock Protein Hsp26
 pdb|2H50|T Chain T, Multiple Distinct Assemblies Reveal Conformational
           Flexibility In The Small Heat Shock Protein Hsp26
 pdb|2H50|U Chain U, Multiple Distinct Assemblies Reveal Conformational
           Flexibility In The Small Heat Shock Protein Hsp26
 pdb|2H50|V Chain V, Multiple Distinct Assemblies Reveal Conformational
           Flexibility In The Small Heat Shock Protein Hsp26
 pdb|2H50|W Chain W, Multiple Distinct Assemblies Reveal Conformational
           Flexibility In The Small Heat Shock Protein Hsp26
 pdb|2H50|X Chain X, Multiple Distinct Assemblies Reveal Conformational
           Flexibility In The Small Heat Shock Protein Hsp26
 pdb|2H53|A Chain A, Multiple Distinct Assemblies Reveal Conformational
           Flexibility In The Small Heat Shock Protein Hsp26
 pdb|2H53|B Chain B, Multiple Distinct Assemblies Reveal Conformational
           Flexibility In The Small Heat Shock Protein Hsp26
 pdb|2H53|C Chain C, Multiple Distinct Assemblies Reveal Conformational
           Flexibility In The Small Heat Shock Protein Hsp26
 pdb|2H53|D Chain D, Multiple Distinct Assemblies Reveal Conformational
           Flexibility In The Small Heat Shock Protein Hsp26
 pdb|2H53|E Chain E, Multiple Distinct Assemblies Reveal Conformational
           Flexibility In The Small Heat Shock Protein Hsp26
 pdb|2H53|F Chain F, Multiple Distinct Assemblies Reveal Conformational
           Flexibility In The Small Heat Shock Protein Hsp26
 pdb|2H53|G Chain G, Multiple Distinct Assemblies Reveal Conformational
           Flexibility In The Small Heat Shock Protein Hsp26
 pdb|2H53|H Chain H, Multiple Distinct Assemblies Reveal Conformational
           Flexibility In The Small Heat Shock Protein Hsp26
 pdb|2H53|I Chain I, Multiple Distinct Assemblies Reveal Conformational
           Flexibility In The Small Heat Shock Protein Hsp26
 pdb|2H53|J Chain J, Multiple Distinct Assemblies Reveal Conformational
           Flexibility In The Small Heat Shock Protein Hsp26
 pdb|2H53|K Chain K, Multiple Distinct Assemblies Reveal Conformational
           Flexibility In The Small Heat Shock Protein Hsp26
 pdb|2H53|L Chain L, Multiple Distinct Assemblies Reveal Conformational
           Flexibility In The Small Heat Shock Protein Hsp26
 pdb|2H53|M Chain M, Multiple Distinct Assemblies Reveal Conformational
           Flexibility In The Small Heat Shock Protein Hsp26
 pdb|2H53|N Chain N, Multiple Distinct Assemblies Reveal Conformational
           Flexibility In The Small Heat Shock Protein Hsp26
 pdb|2H53|O Chain O, Multiple Distinct Assemblies Reveal Conformational
           Flexibility In The Small Heat Shock Protein Hsp26
 pdb|2H53|P Chain P, Multiple Distinct Assemblies Reveal Conformational
           Flexibility In The Small Heat Shock Protein Hsp26
 pdb|2H53|Q Chain Q, Multiple Distinct Assemblies Reveal Conformational
           Flexibility In The Small Heat Shock Protein Hsp26
 pdb|2H53|R Chain R, Multiple Distinct Assemblies Reveal Conformational
           Flexibility In The Small Heat Shock Protein Hsp26
 pdb|2H53|S Chain S, Multiple Distinct Assemblies Reveal Conformational
           Flexibility In The Small Heat Shock Protein Hsp26
 pdb|2H53|T Chain T, Multiple Distinct Assemblies Reveal Conformational
           Flexibility In The Small Heat Shock Protein Hsp26
 pdb|2H53|U Chain U, Multiple Distinct Assemblies Reveal Conformational
           Flexibility In The Small Heat Shock Protein Hsp26
 pdb|2H53|V Chain V, Multiple Distinct Assemblies Reveal Conformational
           Flexibility In The Small Heat Shock Protein Hsp26
 pdb|2H53|W Chain W, Multiple Distinct Assemblies Reveal Conformational
           Flexibility In The Small Heat Shock Protein Hsp26
 pdb|2H53|X Chain X, Multiple Distinct Assemblies Reveal Conformational
           Flexibility In The Small Heat Shock Protein Hsp26
          Length = 93

 Score = 96.7 bits (239), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 53/93 (56%), Positives = 69/93 (74%)

Query: 46  TRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAV 105
            R+DW +TPE HVFKADL G  K +VKVE+EDG VL +SGE+  EKE++ D+ HR+E + 
Sbjct: 1   ARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSS 60

Query: 106 GKFSRRFQLPENAMVDRITAHIANSTLTVTVPK 138
           GKF RRF+L E+A V+ + A + N  LTVTVPK
Sbjct: 61  GKFVRRFRLLEDAKVEEVKAGLENGVLTVTVPK 93


>pdb|3GLA|A Chain A, Crystal Structure Of The Hspa From Xanthomonas Axonopodis
 pdb|3GLA|B Chain B, Crystal Structure Of The Hspa From Xanthomonas Axonopodis
          Length = 100

 Score = 60.8 bits (146), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 47  RIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVG 106
           R+D  +     V  ADL G     ++V+++ G +L I GE+K E    T+   R+E   G
Sbjct: 6   RVDIKEEVNHFVLYADLPGIDPSQIEVQMDKG-ILSIRGERKSESSTETERFSRIERRYG 64

Query: 107 KFSRRFQLPENAMVDRITAHIANSTLTVTVPKK 139
            F RRF LP++A  D ITA   N  L + +PK+
Sbjct: 65  SFHRRFALPDSADADGITAAGRNGVLEIRIPKR 97


>pdb|3GT6|A Chain A, Crystal Structure Of The Hspa From Xanthomonas Axonopodis
 pdb|3GT6|B Chain B, Crystal Structure Of The Hspa From Xanthomonas Axonopodis
 pdb|3GUF|A Chain A, Crystal Structure Of The Hspa From Xanthomonas Axonopodis
 pdb|3GUF|B Chain B, Crystal Structure Of The Hspa From Xanthomonas Axonopodis
          Length = 103

 Score = 60.8 bits (146), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 47  RIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVG 106
           R+D  +     V  ADL G     ++V+++ G +L I GE+K E    T+   R+E   G
Sbjct: 9   RVDIKEEVNHFVLYADLPGIDPSQIEVQMDKG-ILSIRGERKSESSTETERFSRIERRYG 67

Query: 107 KFSRRFQLPENAMVDRITAHIANSTLTVTVPKK 139
            F RRF LP++A  D ITA   N  L + +PK+
Sbjct: 68  SFHRRFALPDSADADGITAAGRNGVLEIRIPKR 100


>pdb|3VQL|A Chain A, Small Heat Shock Protein Hsp14.0 Of C-Terminal Deletion
           Variant
 pdb|3VQL|B Chain B, Small Heat Shock Protein Hsp14.0 Of C-Terminal Deletion
           Variant
 pdb|3VQM|A Chain A, Small Heat Shock Protein Hsp14.0 Of C-Terminal Deletion
           Variant With C-Terminal Peptide
 pdb|3VQM|B Chain B, Small Heat Shock Protein Hsp14.0 Of C-Terminal Deletion
           Variant With C-Terminal Peptide
 pdb|3VQM|C Chain C, Small Heat Shock Protein Hsp14.0 Of C-Terminal Deletion
           Variant With C-Terminal Peptide
 pdb|3VQM|D Chain D, Small Heat Shock Protein Hsp14.0 Of C-Terminal Deletion
           Variant With C-Terminal Peptide
 pdb|3VQM|E Chain E, Small Heat Shock Protein Hsp14.0 Of C-Terminal Deletion
           Variant With C-Terminal Peptide
 pdb|3VQM|F Chain F, Small Heat Shock Protein Hsp14.0 Of C-Terminal Deletion
           Variant With C-Terminal Peptide
 pdb|3VQM|G Chain G, Small Heat Shock Protein Hsp14.0 Of C-Terminal Deletion
           Variant With C-Terminal Peptide
 pdb|3VQM|H Chain H, Small Heat Shock Protein Hsp14.0 Of C-Terminal Deletion
           Variant With C-Terminal Peptide
 pdb|3VQM|I Chain I, Small Heat Shock Protein Hsp14.0 Of C-Terminal Deletion
           Variant With C-Terminal Peptide
 pdb|3VQM|J Chain J, Small Heat Shock Protein Hsp14.0 Of C-Terminal Deletion
           Variant With C-Terminal Peptide
 pdb|3VQM|K Chain K, Small Heat Shock Protein Hsp14.0 Of C-Terminal Deletion
           Variant With C-Terminal Peptide
 pdb|3VQM|L Chain L, Small Heat Shock Protein Hsp14.0 Of C-Terminal Deletion
           Variant With C-Terminal Peptide
 pdb|3VQM|M Chain M, Small Heat Shock Protein Hsp14.0 Of C-Terminal Deletion
           Variant With C-Terminal Peptide
 pdb|3VQM|N Chain N, Small Heat Shock Protein Hsp14.0 Of C-Terminal Deletion
           Variant With C-Terminal Peptide
          Length = 115

 Score = 38.9 bits (89), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 16/110 (14%)

Query: 30  GQFQHVYQFSPPMMIPTRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKI 89
           G ++ VY   PP      +D ++     V  ADL+GF+K  +K  +     L I  E++I
Sbjct: 18  GFYELVY---PP------VDMYEEGGYLVVVADLAGFNKEKIKARVSGQNELIIEAEREI 68

Query: 90  EKEERTDEGHRLEVAVGKFSRR-FQLPENAMVD-RITAHIANSTLTVTVP 137
                T+ G +      K+ R+  +LP N   D  I+    N  LT+ +P
Sbjct: 69  -----TEPGVKYLTQRPKYVRKVIRLPYNVAKDAEISGKYENGVLTIRIP 113


>pdb|3VQK|A Chain A, Small Heat Shock Protein Hsp14.0 Of Wild Type
 pdb|3VQK|B Chain B, Small Heat Shock Protein Hsp14.0 Of Wild Type
 pdb|3VQK|C Chain C, Small Heat Shock Protein Hsp14.0 Of Wild Type
 pdb|3VQK|D Chain D, Small Heat Shock Protein Hsp14.0 Of Wild Type
 pdb|3VQK|E Chain E, Small Heat Shock Protein Hsp14.0 Of Wild Type
 pdb|3VQK|F Chain F, Small Heat Shock Protein Hsp14.0 Of Wild Type
          Length = 123

 Score = 38.9 bits (89), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 16/110 (14%)

Query: 30  GQFQHVYQFSPPMMIPTRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKI 89
           G ++ VY   PP      +D ++     V  ADL+GF+K  +K  +     L I  E++I
Sbjct: 18  GFYELVY---PP------VDMYEEGGYLVVVADLAGFNKEKIKARVSGQNELIIEAEREI 68

Query: 90  EKEERTDEGHRLEVAVGKFSRR-FQLPENAMVD-RITAHIANSTLTVTVP 137
                T+ G +      K+ R+  +LP N   D  I+    N  LT+ +P
Sbjct: 69  -----TEPGVKYLTQRPKYVRKVIRLPYNVAKDAEISGKYENGVLTIRIP 113


>pdb|3AAB|A Chain A, Small Heat Shock Protein Hsp14.0 With The Mutations Of
           I120f And I122f In The Form I Crystal
 pdb|3AAB|B Chain B, Small Heat Shock Protein Hsp14.0 With The Mutations Of
           I120f And I122f In The Form I Crystal
 pdb|3AAC|A Chain A, Small Heat Shock Protein Hsp14.0 With The Mutations Of
           I120f And I122f In The Form Ii Crystal
 pdb|3AAC|B Chain B, Small Heat Shock Protein Hsp14.0 With The Mutations Of
           I120f And I122f In The Form Ii Crystal
          Length = 123

 Score = 38.9 bits (89), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 16/110 (14%)

Query: 30  GQFQHVYQFSPPMMIPTRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKI 89
           G ++ VY   PP      +D ++     V  ADL+GF+K  +K  +     L I  E++I
Sbjct: 18  GFYELVY---PP------VDMYEEGGYLVVVADLAGFNKEKIKARVSGQNELIIEAEREI 68

Query: 90  EKEERTDEGHRLEVAVGKFSRR-FQLPENAMVD-RITAHIANSTLTVTVP 137
                T+ G +      K+ R+  +LP N   D  I+    N  LT+ +P
Sbjct: 69  -----TEPGVKYLTQRPKYVRKVIRLPYNVAKDAEISGKYENGVLTIRIP 113


>pdb|4FEI|A Chain A, Hsp17.7 From Deinococcus Radiodurans
          Length = 102

 Score = 30.4 bits (67), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 33/86 (38%), Gaps = 6/86 (6%)

Query: 49  DWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKF 108
           DW D         D+ G     + +  EDG  L +SGE+       T+   R E   G+F
Sbjct: 10  DWRDAGTHLDLLLDVPGVDAGTLALA-EDGGQLTVSGERP-----GTEHLLRSERPSGRF 63

Query: 109 SRRFQLPENAMVDRITAHIANSTLTV 134
            R    PE        A +A   LTV
Sbjct: 64  VRELAFPEPVRPASGVASLAGGVLTV 89


>pdb|3AQ1|B Chain B, Open State Monomer Of A Group Ii Chaperonin From
           Methanococcoides Burtonii
          Length = 500

 Score = 30.4 bits (67), Expect = 0.42,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 10/65 (15%)

Query: 69  HDVKVEIEDGRVLCISGEKKIEKEERTDE-----GHRLEVAVGKFSRRFQ-----LPENA 118
           H V V IEDG+V+   G  ++E   R  E       R ++AV KF+   +     L ENA
Sbjct: 347 HVVGVVIEDGKVVVGGGSSEVELSLRLSEYASTLKGREQLAVSKFAEALEVIPVALAENA 406

Query: 119 MVDRI 123
            +D I
Sbjct: 407 GLDPI 411


>pdb|4AIB|A Chain A, Crystal Structure Of Ornithine Decarboxylase From
           Entamoeba Histolytica.
 pdb|4AIB|B Chain B, Crystal Structure Of Ornithine Decarboxylase From
           Entamoeba Histolytica.
 pdb|4AIB|C Chain C, Crystal Structure Of Ornithine Decarboxylase From
           Entamoeba Histolytica.
 pdb|4AIB|D Chain D, Crystal Structure Of Ornithine Decarboxylase From
           Entamoeba Histolytica
          Length = 395

 Score = 27.7 bits (60), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 3/45 (6%)

Query: 31  QFQHVYQFSPPMMIPTRIDWHDTPECHVFKADLSGFHKHDVKVEI 75
           + Q + +++P M I  RI  +DT   HVF      F  HD +VEI
Sbjct: 126 EVQKIAKYAPKMGIMIRIMENDTSAGHVFGEK---FGLHDDEVEI 167


>pdb|4AD8|A Chain A, Crystal Structure Of A Deletion Mutant Of Deinococcus
           Radiodurans Recn
          Length = 517

 Score = 26.2 bits (56), Expect = 8.8,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 4/53 (7%)

Query: 57  HVFKADLSGFHKHDVKVEIEDGR----VLCISGEKKIEKEERTDEGHRLEVAV 105
           H+ +      H + V+ ++EDGR    V  ++G++++E+  R   G+  E A+
Sbjct: 456 HLAQIAARAHHHYKVEKQVEDGRTVSHVRLLTGDERLEEIARMLSGNTSEAAL 508


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.320    0.136    0.422 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,314,848
Number of Sequences: 62578
Number of extensions: 217975
Number of successful extensions: 429
Number of sequences better than 100.0: 15
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 418
Number of HSP's gapped (non-prelim): 15
length of query: 156
length of database: 14,973,337
effective HSP length: 91
effective length of query: 65
effective length of database: 9,278,739
effective search space: 603118035
effective search space used: 603118035
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 47 (22.7 bits)