Query 031640
Match_columns 156
No_of_seqs 139 out of 1123
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 04:44:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031640.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031640hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gme_A Heat shock protein 16.9 100.0 3.5E-32 1.2E-36 198.8 11.5 142 1-155 1-151 (151)
2 3gla_A Low molecular weight he 100.0 2.1E-28 7.1E-33 167.0 14.3 98 43-141 2-99 (100)
3 4eld_A MJ16.5-P1, small heat s 100.0 3.5E-28 1.2E-32 179.2 12.2 104 46-154 57-161 (161)
4 4fei_A Heat shock protein-rela 99.9 8E-27 2.7E-31 159.9 11.1 95 43-143 4-98 (102)
5 3aab_A Putative uncharacterize 99.9 7.5E-25 2.6E-29 154.7 11.3 94 44-141 23-117 (123)
6 3l1e_A Alpha-crystallin A chai 99.9 2.3E-24 7.7E-29 148.7 13.4 100 47-154 4-105 (106)
7 2wj5_A Heat shock protein beta 99.9 1.2E-24 4.1E-29 148.9 11.3 96 47-154 3-99 (101)
8 3q9p_A Heat shock protein beta 99.9 2.6E-23 9E-28 138.0 11.2 83 50-140 2-85 (85)
9 2klr_A Alpha-crystallin B chai 99.9 6.6E-23 2.3E-27 152.9 10.7 98 47-155 65-163 (175)
10 2y1y_A Alpha-crystallin B chai 99.9 1.9E-22 6.7E-27 135.1 11.8 85 52-144 3-88 (90)
11 2bol_A TSP36, small heat shock 99.9 2.5E-21 8.6E-26 155.9 11.5 92 43-143 96-192 (314)
12 2bol_A TSP36, small heat shock 99.8 1.1E-20 3.8E-25 152.2 9.5 89 46-139 221-313 (314)
13 1rl1_A Suppressor of G2 allele 99.1 4E-10 1.4E-14 77.7 8.1 82 44-141 8-89 (114)
14 2xcm_C SGT1-like protein, cyto 99.1 4E-10 1.4E-14 74.6 7.8 82 45-142 2-83 (92)
15 3eud_A Protein SHQ1; CS domain 98.5 2E-06 7E-11 59.0 11.6 81 42-143 14-99 (115)
16 2k8q_A Protein SHQ1; beta-sand 98.5 2.6E-07 9.1E-12 65.3 7.1 79 44-143 2-85 (134)
17 3igf_A ALL4481 protein; two-do 98.4 6.6E-07 2.3E-11 73.4 8.8 71 45-138 297-368 (374)
18 1x5m_A Calcyclin-binding prote 98.1 6E-05 2.1E-09 52.6 11.2 82 45-142 20-105 (127)
19 1wh0_A Ubiquitin carboxyl-term 98.0 4.2E-05 1.4E-09 54.1 9.6 91 45-142 19-113 (134)
20 1ejf_A Progesterone receptor P 97.8 0.00013 4.5E-09 50.7 9.0 79 46-141 4-82 (125)
21 1wgv_A KIAA1068 protein; CS do 97.8 0.00032 1.1E-08 48.7 10.5 83 43-141 17-102 (124)
22 1wfi_A Nuclear distribution ge 97.7 0.00037 1.3E-08 48.7 10.0 80 43-141 5-88 (131)
23 2o30_A Nuclear movement protei 97.6 0.00083 2.9E-08 47.0 10.3 77 44-140 3-80 (131)
24 3qor_A Nuclear migration prote 97.6 0.00078 2.7E-08 46.5 9.9 81 42-141 13-97 (121)
25 2rh0_A NUDC domain-containing 97.6 0.001 3.4E-08 48.1 10.5 78 44-141 12-91 (157)
26 2kmw_A Uncharacterized protein 97.4 0.00027 9.1E-09 50.8 6.1 79 44-141 3-82 (150)
27 2cg9_X CO-chaperone protein SB 97.2 0.00016 5.5E-09 51.0 2.8 85 44-140 5-97 (134)
28 4fei_A Heat shock protein-rela 88.7 2 6.8E-05 28.0 6.9 51 40-91 24-97 (102)
29 3q9p_A Heat shock protein beta 84.5 2.5 8.7E-05 26.5 5.5 33 107-140 8-40 (85)
30 3gla_A Low molecular weight he 82.0 6.3 0.00021 25.2 6.8 32 56-88 65-97 (100)
31 2y1y_A Alpha-crystallin B chai 76.3 5.5 0.00019 25.2 5.0 33 107-140 7-39 (90)
32 2wj5_A Heat shock protein beta 74.2 6.7 0.00023 25.4 5.1 33 107-140 12-44 (101)
33 3l1e_A Alpha-crystallin A chai 74.0 6.4 0.00022 25.7 5.0 32 107-139 13-44 (106)
34 4eld_A MJ16.5-P1, small heat s 73.2 5.7 0.0002 27.9 4.9 34 56-90 118-152 (161)
35 3aab_A Putative uncharacterize 71.6 11 0.00037 25.2 5.8 33 108-141 36-69 (123)
36 1nkw_E 50S ribosomal protein L 67.2 15 0.00053 27.4 6.2 45 68-138 39-83 (212)
37 1gme_A Heat shock protein 16.9 66.8 10 0.00035 26.4 5.0 34 56-90 105-139 (151)
38 1rl6_A Protein (ribosomal prot 66.5 13 0.00044 26.9 5.6 45 68-138 11-55 (177)
39 2cql_A OK/SW-CL.103, 60S ribos 65.3 10 0.00035 24.8 4.5 18 68-86 20-37 (100)
40 2nwt_A UPF0165 protein AF_2212 60.4 6.6 0.00023 24.1 2.6 15 121-135 3-17 (69)
41 1vq8_E 50S ribosomal protein L 58.2 19 0.00065 26.1 5.2 46 68-138 9-54 (178)
42 2klr_A Alpha-crystallin B chai 57.0 15 0.0005 26.4 4.4 33 107-140 74-106 (175)
43 3j21_F 50S ribosomal protein L 56.9 19 0.00065 26.2 5.0 44 68-136 14-57 (184)
44 3v2d_H 50S ribosomal protein L 48.2 40 0.0014 24.3 5.6 43 68-136 12-54 (180)
45 3iz5_F 60S ribosomal protein L 46.6 45 0.0015 24.3 5.7 45 68-137 13-59 (190)
46 3u5e_H L8, RP24, YL11, 60S rib 39.6 68 0.0023 23.3 5.7 46 68-138 13-59 (191)
47 2o30_A Nuclear movement protei 37.8 85 0.0029 20.9 5.7 32 106-137 14-45 (131)
48 3bbo_I Ribosomal protein L6; l 36.3 17 0.00058 27.3 2.0 46 67-138 53-99 (223)
49 1q5l_A Chaperone protein DNAK; 33.9 90 0.0031 21.0 5.3 30 122-155 99-131 (135)
50 2rh0_A NUDC domain-containing 33.7 1.2E+02 0.004 21.0 6.2 33 105-137 22-54 (157)
51 3iln_A Laminarinase; jelly ROW 33.6 66 0.0023 24.0 5.0 47 68-117 46-97 (251)
52 2zkr_e 60S ribosomal protein L 33.5 52 0.0018 24.0 4.2 52 62-138 7-61 (192)
53 1n91_A ORF, hypothetical prote 33.3 96 0.0033 20.4 5.1 38 49-88 7-45 (108)
54 1ew4_A CYAY protein; friedreic 32.0 25 0.00084 23.2 2.0 16 122-137 29-44 (106)
55 3r8s_G 50S ribosomal protein L 31.8 24 0.00081 25.4 2.1 42 68-135 11-52 (176)
56 2ks0_A Uncharacterized protein 31.3 29 0.00098 21.2 2.1 23 64-87 16-38 (71)
57 4awd_A Beta-porphyranase; hydr 30.5 1.2E+02 0.0042 23.7 6.2 48 67-117 85-145 (324)
58 1wgv_A KIAA1068 protein; CS do 28.4 1.3E+02 0.0043 19.8 5.5 33 105-137 28-61 (124)
59 2uwa_A Cellulase; glycoside hy 27.8 1.2E+02 0.004 23.1 5.6 43 67-117 31-74 (274)
60 3oeq_A Frataxin homolog, mitoc 26.3 49 0.0017 22.4 2.8 15 123-137 49-63 (123)
61 3qqz_A Putative uncharacterize 25.3 2.1E+02 0.0072 21.3 8.3 64 62-135 21-86 (255)
62 3qor_A Nuclear migration prote 25.2 1.5E+02 0.005 19.4 5.6 33 105-137 25-59 (121)
63 2hbp_A Cytoskeleton assembly c 24.6 46 0.0016 20.2 2.1 35 49-83 7-41 (68)
64 3h0x_A 78 kDa glucose-regulate 24.4 1.7E+02 0.0059 19.9 5.9 31 121-155 81-114 (152)
65 2hyk_A Beta-1,3-glucanase; fam 23.5 76 0.0026 23.4 3.7 47 68-117 49-99 (245)
66 2ayh_A 1,3-1,4-beta-D-glucan 4 22.3 1.2E+02 0.004 21.8 4.5 43 73-116 39-83 (214)
67 3dob_A Heat shock 70 kDa prote 22.2 1.9E+02 0.0066 19.7 5.9 31 121-155 81-114 (152)
68 3dqg_A Heat shock 70 kDa prote 22.2 1.9E+02 0.0066 19.7 6.5 46 105-155 65-114 (151)
69 3jx8_A Putative lipoprotein; s 21.9 81 0.0028 23.3 3.6 40 47-87 33-72 (250)
70 1dyp_A Kappa-carrageenase; hyd 21.5 2.5E+02 0.0086 20.8 6.6 20 67-89 44-63 (271)
71 2op6_A Heat shock 70 kDa prote 21.0 2E+02 0.0068 19.4 5.2 30 121-154 81-113 (152)
72 2kgs_A Uncharacterized protein 20.7 72 0.0025 21.5 2.8 28 63-91 2-29 (132)
73 3n8e_A Stress-70 protein, mito 20.3 2.1E+02 0.007 20.3 5.3 31 121-155 101-134 (182)
74 4e81_A Chaperone protein DNAK; 20.2 2.4E+02 0.0082 20.5 5.8 46 105-155 66-115 (219)
No 1
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=99.98 E-value=3.5e-32 Score=198.83 Aligned_cols=142 Identities=47% Similarity=0.793 Sum_probs=116.3
Q ss_pred CCcccccccCCcCCCCCCCCCCCcCCcCCccccccc----cCC-----CCCCCCccceEEeCCCeEEEEEEeCCCCCCCe
Q 031640 1 MSQISRSRFAGAVGYHHPPFPLSDDTWNGGQFQHVY----QFS-----PPMMIPTRIDWHDTPECHVFKADLSGFHKHDV 71 (156)
Q Consensus 1 m~~~~r~~~~~~~~~~~~~~p~~~~~~d~d~f~~~~----~~~-----~~~~~~p~~di~e~~~~y~i~~~lPG~~~edi 71 (156)
||++.|... +.||+ ++|+ |||..|. ++. ....+.|+++|+|++++|+|.++|||+++++|
T Consensus 1 ms~~~~~~~---------~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~di~e~~d~~~v~~dlPGv~kedI 69 (151)
T 1gme_A 1 MSIVRRSNV---------FDPFA-DLWA-DPFDTFRSIVPAISGGGSETAAFANARMDWKETPEAHVFKADLPGVKKEEV 69 (151)
T ss_dssp -CCCCSCCC---------BCTTC-GGGS-SHHHHHHHHGGGTTSSCCSHHHHGGGCEEEEECSSEEEEEEECTTCCGGGE
T ss_pred Ccccccccc---------cCchH-hhhh-chhhhhhhhcccccccccccccccCCceEEEEcCCEEEEEEECCCCChHHE
Confidence 787755332 24666 8894 2775442 111 12346789999999999999999999999999
Q ss_pred EEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceEEEEeCCEEEEEEeccCCCCCCCCceEE
Q 031640 72 KVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHIANSTLTVTVPKKDIKKHHGHSRSI 151 (156)
Q Consensus 72 ~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~~GvL~I~~pK~~~~~~~~~~~~I 151 (156)
+|++++++.|+|+|+++.+.+.++..|+++|+.+|+|.|+|.||.+|+.++|+|+|+||+|+|++||.++.++ ..++|
T Consensus 70 ~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A~~~nGvL~I~lPK~~~~~~--~~~~I 147 (151)
T 1gme_A 70 KVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVKAGLENGVLTVTVPKAEVKKP--EVKAI 147 (151)
T ss_dssp EEEEETTTEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEEECSSCCCGGGCEEEEETTEEEEEEECCCCCTT--CCCCC
T ss_pred EEEEecCCEEEEEEEEccccccCCceEEEEeEeccEEEEEEECCCCccccceEEEEECCEEEEEEEccCcCCC--CCeEe
Confidence 9999644699999999887777778999999999999999999999999999999999999999999887665 66889
Q ss_pred Eeee
Q 031640 152 KITG 155 (156)
Q Consensus 152 ~I~~ 155 (156)
+|+|
T Consensus 148 ~I~~ 151 (151)
T 1gme_A 148 QISG 151 (151)
T ss_dssp CCCC
T ss_pred eeCC
Confidence 9875
No 2
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=99.96 E-value=2.1e-28 Score=166.98 Aligned_cols=98 Identities=34% Similarity=0.540 Sum_probs=91.5
Q ss_pred CCCccceEEeCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCc
Q 031640 43 MIPTRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDR 122 (156)
Q Consensus 43 ~~~p~~di~e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~ 122 (156)
.+.|++||.|+++.|+|.++|||+++++|+|++++ +.|+|+|+++.+...++..|+++|+.+|+|.|+|.||.++|.++
T Consensus 2 ~~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~-~~L~I~g~~~~~~~~~~~~~~~~er~~g~f~r~~~LP~~vd~~~ 80 (100)
T 3gla_A 2 QWVPRVDIKEEVNHFVLYADLPGIDPSQIEVQMDK-GILSIRGERKSESSTETERFSRIERRYGSFHRRFALPDSADADG 80 (100)
T ss_dssp CSCCCEEEEECSSEEEEEEECTTSCGGGCEEEEET-TEEEEEEEECCGGGSSGGGEEEECCCCEEEEEEEECCTTBCTTS
T ss_pred CccCcEEEEECCCEEEEEEECCCCCHHHEEEEEEC-CEEEEEEEEcCcCccCCccEEEEeecceEEEEEEECCCCcChHH
Confidence 36789999999999999999999999999999997 59999999998877778899999999999999999999999999
Q ss_pred eEEEEeCCEEEEEEeccCC
Q 031640 123 ITAHIANSTLTVTVPKKDI 141 (156)
Q Consensus 123 i~A~~~~GvL~I~~pK~~~ 141 (156)
|+|+|+||+|+|++||.++
T Consensus 81 i~A~~~~GvL~I~~pK~~~ 99 (100)
T 3gla_A 81 ITAAGRNGVLEIRIPKRPA 99 (100)
T ss_dssp CEEEEETTEEEEEEEBC--
T ss_pred eEEEEeCCEEEEEEecCCC
Confidence 9999999999999999875
No 3
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=99.95 E-value=3.5e-28 Score=179.23 Aligned_cols=104 Identities=19% Similarity=0.229 Sum_probs=96.0
Q ss_pred ccceEEeCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEee-eeeeEEEEEECCCCcccCceE
Q 031640 46 TRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEV-AVGKFSRRFQLPENAMVDRIT 124 (156)
Q Consensus 46 p~~di~e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~-~~~~f~r~~~LP~~vd~~~i~ 124 (156)
+++||.|++++|+|.++|||++++||+|++++ +.|+|+|+++.+...++..++++|+ .+|+|.|+|.||.+||.++|+
T Consensus 57 ~pvdi~e~~~~~~v~~dlPG~~~edi~V~~~~-~~L~I~g~~~~~~~~~~~~~~~~Er~~~g~f~R~~~LP~~vd~~~i~ 135 (161)
T 4eld_A 57 MPISIIEGDQHIKVIAWLPGVNKEDIILNAVG-DTLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATVKEENAS 135 (161)
T ss_dssp CCEEEEECSSEEEEEEECTTCCGGGEEEEEET-TEEEEEEECCCCCCCSSCEEEEECSCCCCEEEEEEECSSCBCGGGCE
T ss_pred cceeEEEeCCEEEEEEECCCCChHhEEEEEEC-CEEEEEEEEcccccCCCceEEEEEeeccccEEEEEECCCCcccccEE
Confidence 34999999999999999999999999999998 5999999998876666778999999 999999999999999999999
Q ss_pred EEEeCCEEEEEEeccCCCCCCCCceEEEee
Q 031640 125 AHIANSTLTVTVPKKDIKKHHGHSRSIKIT 154 (156)
Q Consensus 125 A~~~~GvL~I~~pK~~~~~~~~~~~~I~I~ 154 (156)
|+|+||+|+|++||.+..++ ++|+|+
T Consensus 136 A~~~nGvL~I~lpK~~~~~~----r~I~Ie 161 (161)
T 4eld_A 136 AKFENGVLSVILPKAESSIK----KGINIE 161 (161)
T ss_dssp EEEETTEEEEEEEBCGGGSC----CCCCCC
T ss_pred EEEECCEEEEEEEcCCCCCC----cEeecC
Confidence 99999999999999887776 888874
No 4
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=99.94 E-value=8e-27 Score=159.91 Aligned_cols=95 Identities=24% Similarity=0.291 Sum_probs=87.6
Q ss_pred CCCccceEEeCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCc
Q 031640 43 MIPTRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDR 122 (156)
Q Consensus 43 ~~~p~~di~e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~ 122 (156)
.+.|++||.|++++|+|.++|||+++++|+|++++ +.|+|+|+++. ..+++++|+.+|+|.|+|.||.+++.++
T Consensus 4 ~~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~-~~L~I~g~~~~-----~~~~~~~er~~g~f~R~~~LP~~vd~~~ 77 (102)
T 4fei_A 4 PWTPAADWRDAGTHLDLLLDVPGVDAGTLALAEDG-GQLTVSGERPG-----TEHLLRSERPSGRFVRELAFPEPVRPAS 77 (102)
T ss_dssp ECCCCEEEEEETTEEEEEEECTTCCGGGCEEEEET-TEEEEEEEECC-----CSSCSSCCSEEEEEEEEEECSSCBCTTC
T ss_pred cccCcEEEEEcCCEEEEEEECCCCchHhEEEEEEC-CEEEEEEEEec-----CCCEEEEEEeccEEEEEEECCCCcchhH
Confidence 46799999999999999999999999999999997 59999999854 3567888999999999999999999999
Q ss_pred eEEEEeCCEEEEEEeccCCCC
Q 031640 123 ITAHIANSTLTVTVPKKDIKK 143 (156)
Q Consensus 123 i~A~~~~GvL~I~~pK~~~~~ 143 (156)
|+|+|+||+|+|++||.++..
T Consensus 78 i~A~~~~GvL~I~lpK~~~~~ 98 (102)
T 4fei_A 78 GVASLAGGVLTVRFEKLRPTI 98 (102)
T ss_dssp CEEEEETTEEEEEEEBSSCCC
T ss_pred cEEEEECCEEEEEEEccCccc
Confidence 999999999999999987654
No 5
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=99.92 E-value=7.5e-25 Score=154.70 Aligned_cols=94 Identities=22% Similarity=0.314 Sum_probs=86.6
Q ss_pred CCccceEEeCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCce
Q 031640 44 IPTRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRI 123 (156)
Q Consensus 44 ~~p~~di~e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i 123 (156)
+.|+++|.|++++|.|.++|||+++++|+|++++++.|+|+|+++.+. +.+|+++|+.+ +|.|+|.||.+++.++|
T Consensus 23 ~~P~~di~e~~~~~~v~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~---~~~~~~~Er~~-~f~R~~~LP~~vd~~~i 98 (123)
T 3aab_A 23 VYPPVDMYEEGGYLVVVADLAGFNKEKIKARVSGQNELIIEAEREITE---PGVKYLTQRPK-YVRKVIRLPYNVAKDAE 98 (123)
T ss_dssp HCSCEEEEEETTEEEEEEECCSCCGGGCEEEEETTTEEEEEEECCCCC---CSCEEEECSCS-EEEEEEECSSEECTTCC
T ss_pred CCCcEEEEEcCCEEEEEEECCCCCHHHEEEEEeCCCEEEEEEEEeccC---CCeEEEEEEeE-EEEEEEECCCCcCcchh
Confidence 458999999999999999999999999999999724999999987654 56899999999 99999999999999999
Q ss_pred -EEEEeCCEEEEEEeccCC
Q 031640 124 -TAHIANSTLTVTVPKKDI 141 (156)
Q Consensus 124 -~A~~~~GvL~I~~pK~~~ 141 (156)
+|+|+||+|+|++||.+.
T Consensus 99 ~~A~~~~GvL~I~lPK~~~ 117 (123)
T 3aab_A 99 ISGKYENGVLTIRIPIAGT 117 (123)
T ss_dssp CEEEEETTEEEEEEEGGGE
T ss_pred CeeEEcCCEEEEEEEcCCC
Confidence 999999999999999765
No 6
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=99.92 E-value=2.3e-24 Score=148.73 Aligned_cols=100 Identities=20% Similarity=0.326 Sum_probs=84.1
Q ss_pred cceEEeCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceEEE
Q 031640 47 RIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAH 126 (156)
Q Consensus 47 ~~di~e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~ 126 (156)
..+|+|+++.|.|.++|||++++||+|++++ +.|+|+|+++.... ...|+++ .|.|+|.||.+||.++|+|+
T Consensus 4 ~~~i~e~~~~~~v~~dlPG~~~edi~V~v~~-~~L~I~g~~~~~~~--~~~~~~~-----eF~R~~~LP~~vd~~~i~A~ 75 (106)
T 3l1e_A 4 ISEVRSDRDKFVIFLDVKHFSPEDLTVKVQE-DFVEIHGKHNERQD--DHGYISR-----EFHRRYRLPSNVDQSALSCS 75 (106)
T ss_dssp SEEEEECSSEEEEEEECTTSCGGGEEEEEET-TEEEEEEEEEEEET--TTEEEEE-----EEEEEEECCTTBCTTSCEEE
T ss_pred ceEEEEcCCEEEEEEECCCCChHHEEEEEEC-CEEEEEEEEccccC--CCCEEEE-----EEEEEEECCCCcChhHcEEE
Confidence 4699999999999999999999999999998 59999999875432 2345443 49999999999999999999
Q ss_pred E-eCCEEEEEEeccCCCCC-CCCceEEEee
Q 031640 127 I-ANSTLTVTVPKKDIKKH-HGHSRSIKIT 154 (156)
Q Consensus 127 ~-~~GvL~I~~pK~~~~~~-~~~~~~I~I~ 154 (156)
| +||+|+|++||.++... ..+.++|+|+
T Consensus 76 ~s~~GvL~I~~PK~~~~~~~~~~~r~I~I~ 105 (106)
T 3l1e_A 76 LSADGMLTFSGPKIPSGVDAGHSERAIPVS 105 (106)
T ss_dssp ECTTSEEEEEEEBCCCCTTTTSSSCCCCCC
T ss_pred ECCCCEEEEEEEccCcccccCCCCeEeeec
Confidence 9 89999999999887520 0155889885
No 7
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=99.92 E-value=1.2e-24 Score=148.88 Aligned_cols=96 Identities=13% Similarity=0.187 Sum_probs=81.8
Q ss_pred cceEEeCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceEEE
Q 031640 47 RIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAH 126 (156)
Q Consensus 47 ~~di~e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~ 126 (156)
.+||+|+++.|.|.++|||++++||+|++++ +.|+|+|+++.+. ++.+|+++| |.|+|.||.+||.++|+|+
T Consensus 3 ~vdi~e~~~~~~v~~dlPG~~~edI~V~v~~-~~L~I~g~~~~~~--~~~~~~~~e-----F~R~~~LP~~vd~~~i~A~ 74 (101)
T 2wj5_A 3 MAQVPTDPGYFSVLLDVKHFSPEEISVKVVG-DHVEVHARHEERP--DEHGFIARE-----FHRRYRLPPGVDPAAVTSA 74 (101)
T ss_dssp CCCCCCCSSCEEEEEECTTSCGGGEEEEEET-TEEEEEEEEEECS--STTCCEEEE-----EEEEEECCTTBCTTCCEEE
T ss_pred cEEEEEeCCEEEEEEECCCCcHHHeEEEEEC-CEEEEEEEEeccc--CCCCEEEEE-----EEEEEECCCCcChhHCEEE
Confidence 4789999999999999999999999999997 5999999997653 234565554 9999999999999999999
Q ss_pred E-eCCEEEEEEeccCCCCCCCCceEEEee
Q 031640 127 I-ANSTLTVTVPKKDIKKHHGHSRSIKIT 154 (156)
Q Consensus 127 ~-~~GvL~I~~pK~~~~~~~~~~~~I~I~ 154 (156)
| +||+|+|++||.+..++ +.+.|+
T Consensus 75 ~s~nGvL~I~lPK~~~~~~----~~~~i~ 99 (101)
T 2wj5_A 75 LSPEGVLSIQATPASAQAS----LPSPPA 99 (101)
T ss_dssp ECTTSEEEEEECBCCCCCS----SCC---
T ss_pred ECCCCEEEEEEECCCcCCC----CCCccc
Confidence 9 89999999999988777 555543
No 8
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=99.90 E-value=2.6e-23 Score=138.00 Aligned_cols=83 Identities=22% Similarity=0.386 Sum_probs=69.6
Q ss_pred EEeCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceEEEEe-
Q 031640 50 WHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHIA- 128 (156)
Q Consensus 50 i~e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~- 128 (156)
+.|++++|.|.++|||+++++|+|++++ +.|+|+|+++..... .. ..+++|.|+|.||.+||.++|+|+|+
T Consensus 2 ~~E~~~~~~v~~dlPG~~~edi~V~v~~-~~L~I~g~~~~~~~~--~~-----~~~~~F~R~~~LP~~vd~~~i~A~~~~ 73 (85)
T 3q9p_A 2 GSHTADRWRVSLDVNHFAPDELTVKTKD-GVVEITGKHAARQDE--HG-----YISRCFTRKYTLPPGVDPTQVSSSLSP 73 (85)
T ss_dssp -CCCCCEEEEEEECTTTCCSEEEEEEET-TEEEEEEEEC--------------CCCEEEEEEEECCTTCCGGGCEEEECT
T ss_pred ccCcCCEEEEEEECCCCChHHEEEEEEC-CEEEEEEEEccccCC--CC-----EEEEEEEEEEECCCCcChHHcEEEECC
Confidence 4588999999999999999999999998 599999998765432 11 24678999999999999999999998
Q ss_pred CCEEEEEEeccC
Q 031640 129 NSTLTVTVPKKD 140 (156)
Q Consensus 129 ~GvL~I~~pK~~ 140 (156)
||+|+|++||.+
T Consensus 74 ~GvL~I~lPK~k 85 (85)
T 3q9p_A 74 EGTLTVEAPMPK 85 (85)
T ss_dssp TSEEEEEEECCC
T ss_pred CCEEEEEEEcCC
Confidence 999999999963
No 9
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=99.89 E-value=6.6e-23 Score=152.88 Aligned_cols=98 Identities=20% Similarity=0.347 Sum_probs=72.7
Q ss_pred cceEEeCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceEEE
Q 031640 47 RIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAH 126 (156)
Q Consensus 47 ~~di~e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~ 126 (156)
.++|.|++++|.|.++|||++++||+|++++ +.|+|+|+++.+.+ +.+++++ .|.|+|.||.+||.++|+|+
T Consensus 65 ~~dv~e~~d~~~v~~dlPG~~~edI~V~v~~-~~L~I~g~~~~~~~--~~~~~~r-----eF~R~~~LP~~Vd~~~i~A~ 136 (175)
T 2klr_A 65 LSEMRLEKDRFSVNLDVKHFSPEELKVKVLG-DVIEVHGKHEERQD--EHGFISR-----EFHRKYRIPADVDPLTITSS 136 (175)
T ss_dssp ----CCCCSEEEEEECCSSCCGGGEEEEEET-TEEEEEEEEEEEEE--TTEEEEE-----EEEEEEECTTTCCTTTCEEE
T ss_pred ceEEEEcCCeEEEEEECCCCChHHEEEEEEC-CEEEEEEEEccccc--CCceEEE-----EEEEEEECCCCcChhHeEEE
Confidence 3699999999999999999999999999998 59999999876542 3455554 39999999999999999999
Q ss_pred E-eCCEEEEEEeccCCCCCCCCceEEEeee
Q 031640 127 I-ANSTLTVTVPKKDIKKHHGHSRSIKITG 155 (156)
Q Consensus 127 ~-~~GvL~I~~pK~~~~~~~~~~~~I~I~~ 155 (156)
| +||+|+|++||.+..+ ..++|+|+.
T Consensus 137 ~s~dGvL~I~lPK~~~~~---~~r~I~I~~ 163 (175)
T 2klr_A 137 LSSDGVLTVNGPRKQVSG---PERTIPITR 163 (175)
T ss_dssp ECTTSCEEEEEECC----------------
T ss_pred EcCCCEEEEEEECCCCCC---CCeEEEEec
Confidence 9 7999999999976543 247888864
No 10
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=99.89 E-value=1.9e-22 Score=135.08 Aligned_cols=85 Identities=19% Similarity=0.337 Sum_probs=69.1
Q ss_pred eCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceEEEE-eCC
Q 031640 52 DTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHI-ANS 130 (156)
Q Consensus 52 e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~-~~G 130 (156)
++++.|+|.++|||++++||+|++.+ +.|+|+|+++... ++..|+++ .|.|+|.||.+|+.++|+|.| +||
T Consensus 3 ~~~~~~~v~~dlPG~~~edi~V~v~~-~~L~I~g~~~~~~--~~~~~~~~-----ef~R~~~LP~~vd~~~i~A~~~~~G 74 (90)
T 2y1y_A 3 MEKDRFSVNLDVKHFSPEELKVKVLG-DVIEVHGKHEERQ--DEHGFISR-----EFHRKYRIPADVDPLTITSSMSSDG 74 (90)
T ss_dssp ---CCEEEEEECTTSCGGGEEEEEET-TEEEEEEEEEEEE--CSSSEEEE-----EEEEEEECCTTBCGGGCEEEECTTS
T ss_pred cCCCEEEEEEECCCCcHHHeEEEEEC-CEEEEEEEEeccc--CCCCEEEE-----EEEEEEECCCCcChhHcEEEECCCC
Confidence 67899999999999999999999997 5999999987653 34456554 499999999999999999999 899
Q ss_pred EEEEEEeccCCCCC
Q 031640 131 TLTVTVPKKDIKKH 144 (156)
Q Consensus 131 vL~I~~pK~~~~~~ 144 (156)
+|+|++||.+..++
T Consensus 75 vL~I~~pK~~~~~p 88 (90)
T 2y1y_A 75 VLTVNGPRKQVSGP 88 (90)
T ss_dssp EEEEEECBC-----
T ss_pred EEEEEEEcCCCCCC
Confidence 99999999887665
No 11
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.86 E-value=2.5e-21 Score=155.92 Aligned_cols=92 Identities=13% Similarity=0.236 Sum_probs=82.1
Q ss_pred CCCccceEEeCCC----eEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCc
Q 031640 43 MIPTRIDWHDTPE----CHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENA 118 (156)
Q Consensus 43 ~~~p~~di~e~~~----~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~v 118 (156)
.+.|++||+|+++ +|.|.++|||+++++|+|++++ +.|+|+|+++.+.+. .+.+|+|.|+|.||.+|
T Consensus 96 ~~~p~vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v~~-~~L~I~ge~~~~~e~--------~r~~g~F~R~~~LP~~V 166 (314)
T 2bol_A 96 ELDFLKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKADK-NKLVVRAQKSVACGD--------AAMSESVGRSIPLPPSV 166 (314)
T ss_dssp TTGGGGGCEEECTTSSEEEEEEEECTTCCTTTEEEEEET-TEEEEEECCBSSTTC--------CCBCCCEEEEEECCTTB
T ss_pred cCCCccceEEcCCCCceEEEEEEECCCCchHHeEEEEEC-CEEEEEEEEeccCCC--------CEEEEEEEEEEECCCCc
Confidence 3568999999999 9999999999999999999998 599999998754321 16789999999999999
Q ss_pred ccCceEEEEe-CCEEEEEEeccCCCC
Q 031640 119 MVDRITAHIA-NSTLTVTVPKKDIKK 143 (156)
Q Consensus 119 d~~~i~A~~~-~GvL~I~~pK~~~~~ 143 (156)
+.++|+|+|+ ||||+|++||.++..
T Consensus 167 d~e~i~A~~~~nGVL~I~lPK~~~~~ 192 (314)
T 2bol_A 167 DRNHIQATITTDDVLVIEAPVNEPNY 192 (314)
T ss_dssp CGGGCEEEECSSSEEEEEEEBSSCCT
T ss_pred cccccEEEEeCCCEEEEEEeccCccc
Confidence 9999999999 999999999987654
No 12
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.83 E-value=1.1e-20 Score=152.18 Aligned_cols=89 Identities=17% Similarity=0.218 Sum_probs=70.0
Q ss_pred ccceEEeCC---CeEEEEEEe-CCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccC
Q 031640 46 TRIDWHDTP---ECHVFKADL-SGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVD 121 (156)
Q Consensus 46 p~~di~e~~---~~y~i~~~l-PG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~ 121 (156)
...+|.+++ +.|.|.++| ||++++||+|++++ +.|+|+|+++.+.+ .++++|+.+|+|.|+|.||++||.+
T Consensus 221 ~~~~i~e~~~~~~~~~v~~~ldPG~~~edi~V~v~~-~~LtI~ge~~~~~~----~~~~~Er~~g~F~R~~~LP~~vd~~ 295 (314)
T 2bol_A 221 EGLEIVTAEDGSKKIHLELKVDPHFAPKDVKVWAKG-NKVYVHGVTGKEEK----TENASHSEHREFYKAFVTPEVVDAS 295 (314)
T ss_dssp CEEEEEECTTSCEEEEEEEECCTTCCGGGEEEEESS-SEEEEEEEEC----------------CEEEEEEEECSSEECGG
T ss_pred CCCcEEEecCCCcEEEEEEEcCCCCChHHeEEEEEC-CEEEEEEEEeccCC----ceEEEEEeeeEEEEEEECCCCcChH
Confidence 345666654 479999999 99999999999997 69999999886543 4688899999999999999999999
Q ss_pred ceEEEEeCCEEEEEEecc
Q 031640 122 RITAHIANSTLTVTVPKK 139 (156)
Q Consensus 122 ~i~A~~~~GvL~I~~pK~ 139 (156)
+|+|+|+||||+|++||.
T Consensus 296 ~i~A~~~dGvL~i~~Pk~ 313 (314)
T 2bol_A 296 KTQAEIVDGLMVVEAPLF 313 (314)
T ss_dssp GCEEEEETTEEEEEEEEE
T ss_pred HeEEEEeCCEEEEEEecC
Confidence 999999999999999985
No 13
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.09 E-value=4e-10 Score=77.66 Aligned_cols=82 Identities=16% Similarity=0.269 Sum_probs=71.4
Q ss_pred CCccceEEeCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCce
Q 031640 44 IPTRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRI 123 (156)
Q Consensus 44 ~~p~~di~e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i 123 (156)
..+.+++.++++.+.|.+.+||++++++.|.+++ +.|.|++.... ...|...+.|+..|+++..
T Consensus 8 ~~~~~~W~Qt~~~V~v~i~l~~v~~~~v~v~~~~-~~l~v~~~~~~---------------~~~y~~~~~L~~~I~~e~s 71 (114)
T 1rl1_A 8 SKIKYDWYQTESQVVITLMIKNVQKNDVNVEFSE-KELSALVKLPS---------------GEDYNLKLELLHPIIPEQS 71 (114)
T ss_dssp CCCCEEEEECSSEEEEEECCCSCCGGGEEEECSS-SCEEEEEECTT---------------SSEEEEEECBSSCCCGGGE
T ss_pred CCCCccEEeCCCEEEEEEEeCCCCHHHCEEEEEc-CEEEEEEEeCC---------------CcEEEEEeeCCCcCCcccc
Confidence 4567899999999999999999999999999998 58999976421 1247788899999999999
Q ss_pred EEEEeCCEEEEEEeccCC
Q 031640 124 TAHIANSTLTVTVPKKDI 141 (156)
Q Consensus 124 ~A~~~~GvL~I~~pK~~~ 141 (156)
++++.+|.|+|+|+|++.
T Consensus 72 ~~~~~~~~l~i~L~K~~~ 89 (114)
T 1rl1_A 72 TFKVLSTKIEIKLKKPEA 89 (114)
T ss_dssp EEEECSSSEEEEEECSSC
T ss_pred EEEEECCEEEEEEEcCCC
Confidence 999999999999999765
No 14
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=99.08 E-value=4e-10 Score=74.59 Aligned_cols=82 Identities=17% Similarity=0.257 Sum_probs=71.0
Q ss_pred CccceEEeCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceE
Q 031640 45 PTRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRIT 124 (156)
Q Consensus 45 ~p~~di~e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~ 124 (156)
.+++++.++++.+.|.+.+||+.++++.|.+++ +.|.|++.... ...|...+.|+..|+++..+
T Consensus 2 ~~~~~W~Qt~~~V~v~i~~~~v~~~~v~v~~~~-~~l~v~~~~~~---------------~~~y~~~~~L~~~I~~~~s~ 65 (92)
T 2xcm_C 2 KYRHEYYQKPEEVVVTVFAKGIPKQNVNIDFGE-QILSVVIEVPG---------------EDAYYLQPRLFGKIIPDKCK 65 (92)
T ss_dssp CSEEEEEEETTEEEEEEECCSCCGGGEEEEECS-SBEEEEECCTT---------------SCCEEECCBBSSCBCGGGCE
T ss_pred CccccEEeCCCEEEEEEEECCCChHHeEEEEEC-CEEEEEEEcCC---------------CcEEEEeeEcCCccCchhEE
Confidence 467899999999999999999999999999998 58999875321 12477788999999999999
Q ss_pred EEEeCCEEEEEEeccCCC
Q 031640 125 AHIANSTLTVTVPKKDIK 142 (156)
Q Consensus 125 A~~~~GvL~I~~pK~~~~ 142 (156)
+++.+|.|+|+|+|.++.
T Consensus 66 ~~~~~~~l~i~L~K~~~~ 83 (92)
T 2xcm_C 66 YEVLSTKIEICLAKADII 83 (92)
T ss_dssp EEECSSCEEEEEEBSSSC
T ss_pred EEEECCEEEEEEEcCCCC
Confidence 999999999999998754
No 15
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=98.53 E-value=2e-06 Score=58.99 Aligned_cols=81 Identities=19% Similarity=0.282 Sum_probs=69.4
Q ss_pred CCCCccceEEeCCCeEEEEEEeCCCC--CCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCC-c
Q 031640 42 MMIPTRIDWHDTPECHVFKADLSGFH--KHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPEN-A 118 (156)
Q Consensus 42 ~~~~p~~di~e~~~~y~i~~~lPG~~--~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~-v 118 (156)
.+..|.+.|..+++...|.+.+|-+. ..++++.+++ +.+.... ..|.-++.||.. +
T Consensus 14 ~~iTP~F~itQDdefv~I~I~~p~ir~~a~~~ei~vd~-~~F~F~~--------------------~PYyLRL~lP~~vv 72 (115)
T 3eud_A 14 KMITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQE-NMIIFHL--------------------SPYYLRLRFPHELI 72 (115)
T ss_dssp CCBCCCEEEEECSSEEEEEEECCSCCCCSSSCEEEEET-TEEEEEE--------------------TTEEEEEECSSCEE
T ss_pred CEeCCcEEEEECCCEEEEEEEcCceecccCccEEEEeC-CEEEEec--------------------CCeEEEEecCccee
Confidence 46789999999999999999999876 7899999997 6888873 346778999999 4
Q ss_pred ccCceEEEE--eCCEEEEEEeccCCCC
Q 031640 119 MVDRITAHI--ANSTLTVTVPKKDIKK 143 (156)
Q Consensus 119 d~~~i~A~~--~~GvL~I~~pK~~~~~ 143 (156)
+-+..+|+| ++|.++|++||....+
T Consensus 73 ed~~~~A~YD~d~g~~~v~lpK~~~GE 99 (115)
T 3eud_A 73 DDERSTAQYDSKDECINVKVAKLNKNE 99 (115)
T ss_dssp CSTTCEEEEETTTTEEEEEEEESSTTC
T ss_pred cCCCcceEEeCCCcEEEEEEcCCcCCC
Confidence 778899999 6999999999987654
No 16
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=98.52 E-value=2.6e-07 Score=65.32 Aligned_cols=79 Identities=18% Similarity=0.275 Sum_probs=68.2
Q ss_pred CCccceEEeCCCeEEEEEEeCCCC--CCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCc-cc
Q 031640 44 IPTRIDWHDTPECHVFKADLSGFH--KHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENA-MV 120 (156)
Q Consensus 44 ~~p~~di~e~~~~y~i~~~lPG~~--~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~v-d~ 120 (156)
..|.+.+..+++..+|.+.+|..+ ..++++.+++ +.+.... ..|.-++.||..| +.
T Consensus 2 iTP~F~itQd~e~viV~Ik~P~~~~~~sdiei~v~~-~~F~F~~--------------------~PYyLRL~LP~~V~e~ 60 (134)
T 2k8q_A 2 ITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQE-NMIIFHL--------------------SPYYLRLRFPHELIDD 60 (134)
T ss_dssp CCSEEEEEECSSEEEEEEECCSSCCCSSSCCCEECS-SSEEECS--------------------SSSCEEECCSSCEECC
T ss_pred cCceEEEEECCCEEEEEEEcCccccCccccEEEEeC-CEEEEec--------------------CCeEEEecCCCeeecC
Confidence 468899999999999999999999 8999999997 6888873 2466779999996 88
Q ss_pred CceEEEE--eCCEEEEEEeccCCCC
Q 031640 121 DRITAHI--ANSTLTVTVPKKDIKK 143 (156)
Q Consensus 121 ~~i~A~~--~~GvL~I~~pK~~~~~ 143 (156)
+..+|+| +.|.|+|++||....+
T Consensus 61 ~~~kA~YD~d~~~~~VtLpK~~~Ge 85 (134)
T 2k8q_A 61 ERSTAQYDSKDECINVKVAKLNKNE 85 (134)
T ss_dssp SSCEEEEETTTTEEEEEEEESSTTC
T ss_pred CCcceeEeccCCEEEEEEeCCCCCC
Confidence 8899999 5999999999977654
No 17
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=98.45 E-value=6.6e-07 Score=73.43 Aligned_cols=71 Identities=21% Similarity=0.252 Sum_probs=60.1
Q ss_pred CccceEEeCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccC-ce
Q 031640 45 PTRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVD-RI 123 (156)
Q Consensus 45 ~p~~di~e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~-~i 123 (156)
..++.|.+. .|.+++.|||+++++|++...++ .|+|+ .|.|+|.+.||.....- -.
T Consensus 297 ~~~~~i~~~--~~~~~l~lP~~~~~~~~l~~~gd-eL~v~--------------------~g~~rR~i~LP~~L~~~~v~ 353 (374)
T 3igf_A 297 PKPITIDTH--NRQVRLFLPGFDKKQVKLTQYGP-EVTVE--------------------AGDQRRNIFLPPALSGRPIT 353 (374)
T ss_dssp CCSEEEETT--TTEEEEECTTCCGGGCEEEEETT-EEEEE--------------------ETTEEEEEECCTTTTTCCEE
T ss_pred CCCEEEEec--cEEEEEECCCCCHHHeEEEEECC-eEEEE--------------------ECCEeecccCCHHHcCCCcc
Confidence 345555444 89999999999999999999976 99999 67899999999985544 58
Q ss_pred EEEEeCCEEEEEEec
Q 031640 124 TAHIANSTLTVTVPK 138 (156)
Q Consensus 124 ~A~~~~GvL~I~~pK 138 (156)
.|+|+||.|+|++-.
T Consensus 354 ~A~~~~~~L~i~~~~ 368 (374)
T 3igf_A 354 GAKFQNNYLIISFLE 368 (374)
T ss_dssp EEEEETTEEEEEECC
T ss_pred ccEEECCEEEEEEeh
Confidence 899999999999864
No 18
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.09 E-value=6e-05 Score=52.58 Aligned_cols=82 Identities=15% Similarity=0.200 Sum_probs=67.7
Q ss_pred CccceEEeCCCeEEEEEEeCCC---CCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEE-CCCCccc
Q 031640 45 PTRIDWHDTPECHVFKADLSGF---HKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQ-LPENAMV 120 (156)
Q Consensus 45 ~p~~di~e~~~~y~i~~~lPG~---~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~-LP~~vd~ 120 (156)
.+.+++..+.+...|.+.++|+ .++++.|.+.+ +.|.|.+.... + ..|.-.+. |-..|++
T Consensus 20 ~~~y~W~Qt~~~V~i~I~l~~~~~~~~~~v~V~~~~-~~l~v~~~~~~-----~----------~~y~~~~~~L~~~I~~ 83 (127)
T 1x5m_A 20 ISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTE-RSFDLLVKNLN-----G----------KSYSMIVNNLLKPISV 83 (127)
T ss_dssp CCSCEEEEETTEEEEEEECTTTTTSCTTSEEEEECS-SEEEEEECSCS-----S----------SCEEEEEECBSSCCCT
T ss_pred ccEEEEEcCCCEEEEEEEeCCCCcCCccccEEEEEc-CEEEEEEEcCC-----C----------CcEEEEhHHhcCccCc
Confidence 3578999999999999999999 89999999998 58999863211 1 13556675 8899999
Q ss_pred CceEEEEeCCEEEEEEeccCCC
Q 031640 121 DRITAHIANSTLTVTVPKKDIK 142 (156)
Q Consensus 121 ~~i~A~~~~GvL~I~~pK~~~~ 142 (156)
+..+..+..+.++|+|.|++..
T Consensus 84 e~S~~~v~~~kVei~L~K~~~~ 105 (127)
T 1x5m_A 84 EGSSKKVKTDTVLILCRKKVEN 105 (127)
T ss_dssp TTCEEEEETTEEEEEEECSSSS
T ss_pred ccCEEEEeCCEEEEEEEECCCC
Confidence 9999999999999999998753
No 19
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=98.04 E-value=4.2e-05 Score=54.12 Aligned_cols=91 Identities=13% Similarity=0.172 Sum_probs=69.9
Q ss_pred CccceEEeC-CCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeee---eEEEEEECCCCccc
Q 031640 45 PTRIDWHDT-PECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVG---KFSRRFQLPENAMV 120 (156)
Q Consensus 45 ~p~~di~e~-~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~---~f~r~~~LP~~vd~ 120 (156)
.++++|+++ .+...|.+.++++.++++.|.+.+ +.|.|+........ ++.--..| .|.-.+.|-..|++
T Consensus 19 ~~r~~W~Qt~~~~V~vtI~~k~v~~~~v~V~f~~-~~l~v~~~~~~~~~------l~~~~a~g~~~~y~~~~~L~~~I~p 91 (134)
T 1wh0_A 19 FVKNDSYEKGPDSVVVHVYVKEICRDTSRVLFRE-QDFTLIFQTRDGNF------LRLHPGCGPHTTFRWQVKLRNLIEP 91 (134)
T ss_dssp CCCEEEEEETTTEEEEEEECCSBCTTSCEEEECS-SEEEEEECBCCHHH------HHHSTTCCTTSCEEEEEEBSSCEEE
T ss_pred CCCeEEEcCCCCEEEEEEEeCCCCcccCEEEEEC-CEEEEEEEcCCCcc------cccccccCcceeEEEeccccccCCc
Confidence 578999999 999999999999999999999998 58999865322110 00000001 36667789999999
Q ss_pred CceEEEEeCCEEEEEEeccCCC
Q 031640 121 DRITAHIANSTLTVTVPKKDIK 142 (156)
Q Consensus 121 ~~i~A~~~~GvL~I~~pK~~~~ 142 (156)
+..+.++..+.++|+|.|++..
T Consensus 92 e~S~~~v~~~kIeI~L~K~e~~ 113 (134)
T 1wh0_A 92 EQCTFCFTASRIDICLRKRQSQ 113 (134)
T ss_dssp EEEEEEECSSEEEEEEEESSSC
T ss_pred hhCEEEEeCCEEEEEEEECCCC
Confidence 9999999999999999998653
No 20
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=97.83 E-value=0.00013 Score=50.70 Aligned_cols=79 Identities=14% Similarity=0.122 Sum_probs=65.6
Q ss_pred ccceEEeCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceEE
Q 031640 46 TRIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITA 125 (156)
Q Consensus 46 p~~di~e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A 125 (156)
|.+++..+.+.+.|++.+|+. +++.|.++. +.|.+++..... + ..|.-.+.|-..|+++..+.
T Consensus 4 ~~~~W~Qt~~~V~ltI~~~~~--~~~~V~~~~-~~l~~~~~~~~~----~----------~~y~~~l~L~~~I~~e~S~~ 66 (125)
T 1ejf_A 4 ASAKWYDRRDYVFIEFCVEDS--KDVNVNFEK-SKLTFSCLGGSD----N----------FKHLNEIDLFHCIDPNDSKH 66 (125)
T ss_dssp CCEEEEECSSEEEEEECCTTE--EEEEEEEET-TEEEEEEEETTT----T----------EEEEEEEEBSSCEEEEEEEE
T ss_pred CceeEEeCCCEEEEEEEecCC--CceEEEEEC-CEEEEEEEeCCC----C----------ceEEEEEEccceeccccCEE
Confidence 479999999999999999996 799999998 599998764111 0 13667788999999999999
Q ss_pred EEeCCEEEEEEeccCC
Q 031640 126 HIANSTLTVTVPKKDI 141 (156)
Q Consensus 126 ~~~~GvL~I~~pK~~~ 141 (156)
++.+..++|+|.|+++
T Consensus 67 ~v~~~kiei~L~K~~~ 82 (125)
T 1ejf_A 67 KRTDRSILCCLRKGES 82 (125)
T ss_dssp EECSSCEEEEEEESST
T ss_pred EECCCEEEEEEEECCC
Confidence 9988999999999864
No 21
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=97.80 E-value=0.00032 Score=48.66 Aligned_cols=83 Identities=7% Similarity=0.096 Sum_probs=66.1
Q ss_pred CCCccceEEeCCCeEEEEEEeC-CC-CCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCccc
Q 031640 43 MIPTRIDWHDTPECHVFKADLS-GF-HKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMV 120 (156)
Q Consensus 43 ~~~p~~di~e~~~~y~i~~~lP-G~-~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~ 120 (156)
...|.+.+..+.+...|++.|| |+ +.+++.|.+.. +.|.|..+.. .+. .+.-...|...|++
T Consensus 17 ~~~~~y~W~Qt~~~V~i~I~lp~~~~~~kdv~V~i~~-~~l~v~~~~~-----~~~----------~~~~~~~L~~~I~~ 80 (124)
T 1wgv_A 17 AVRENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSS-SSIRVAMLEE-----NGE----------RVLMEGKLTHKINT 80 (124)
T ss_dssp BCCSSCEEEEETTEEEEEEECCTTCCSGGGEEEEECS-SEEEEEEECS-----SSE----------EEEEEEEBSSCBCT
T ss_pred CcCCcEEEEEcccEEEEEEEcCCCCCchhheEEEEEc-CEEEEEEEcc-----CCC----------ceEEcccccCcCCC
Confidence 3457899999999999999999 88 89999999998 5999986421 010 12234679999999
Q ss_pred CceEEEEeCCE-EEEEEeccCC
Q 031640 121 DRITAHIANST-LTVTVPKKDI 141 (156)
Q Consensus 121 ~~i~A~~~~Gv-L~I~~pK~~~ 141 (156)
+..+-.++++. |.|+|.|.+.
T Consensus 81 e~S~w~i~~~k~v~i~L~K~~~ 102 (124)
T 1wgv_A 81 ESSLWSLEPGKCVLVNLSKVGE 102 (124)
T ss_dssp TTCEEEECTTSEEEEEECBSSS
T ss_pred cCCEEEEeCCCEEEEEEEECCC
Confidence 99999998885 9999999753
No 22
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=97.72 E-value=0.00037 Score=48.73 Aligned_cols=80 Identities=18% Similarity=0.159 Sum_probs=64.5
Q ss_pred CCCccceEEeCCCeEEEEEEeC-C--CCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcc
Q 031640 43 MIPTRIDWHDTPECHVFKADLS-G--FHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAM 119 (156)
Q Consensus 43 ~~~p~~di~e~~~~y~i~~~lP-G--~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd 119 (156)
...|.+.+..+.+...|++.|| | ++.+++.|.+.. +.|.|..+.. . ..-...|...|+
T Consensus 5 ~~~~~y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i~~-~~l~v~~kg~--------~----------~~~~~~L~~~I~ 65 (131)
T 1wfi_A 5 SSGPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQR-RHLRVGLKGQ--------P----------PVVDGELYNEVK 65 (131)
T ss_dssp SSCCSSEEEECSSEEEEEECCCCSSCCCTTSEEEEEET-TEEEEEETTS--------C----------CSBCSCBSSCBC
T ss_pred CCCCcEEEEecCCEEEEEEECCCCCcccccceEEEEeC-CEEEEEECCc--------e----------EEEecccccccc
Confidence 4557899999999999999999 6 899999999998 5999985310 0 001235788899
Q ss_pred cCceEEEEeCC-EEEEEEeccCC
Q 031640 120 VDRITAHIANS-TLTVTVPKKDI 141 (156)
Q Consensus 120 ~~~i~A~~~~G-vL~I~~pK~~~ 141 (156)
++..+-.+++| .|.|+|-|.+.
T Consensus 66 ~e~s~w~i~~~k~v~i~L~K~~~ 88 (131)
T 1wfi_A 66 VEESSWLIEDGKVVTVHLEKINK 88 (131)
T ss_dssp STTCEEEEETTTEEEEEEEBSSS
T ss_pred cccCEEEEcCCCEEEEEEEECCC
Confidence 99999999998 89999999764
No 23
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=97.60 E-value=0.00083 Score=46.95 Aligned_cols=77 Identities=13% Similarity=0.211 Sum_probs=61.2
Q ss_pred CCccceEEeCCCeEEEEEEeC-CCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCc
Q 031640 44 IPTRIDWHDTPECHVFKADLS-GFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDR 122 (156)
Q Consensus 44 ~~p~~di~e~~~~y~i~~~lP-G~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~ 122 (156)
..|.+.+..+.+...|.+.|| |++.+++.|.+.. +.|.|.++ +. . .-...|...|+++.
T Consensus 3 ~~~~y~W~Qt~~~V~i~I~lp~~~~~kdv~V~i~~-~~l~v~~~--------g~----------~-~~~~~L~~~I~~e~ 62 (131)
T 2o30_A 3 SEAKYTWDQELNEINIQFPVTGDADSSAIKIRMVG-KKICVKNQ--------GE----------I-VIDGELLHEVDVSS 62 (131)
T ss_dssp --CCCEEEEETTEEEEEEECC---CCSCEEEEEET-TEEEEEET--------TE----------E-EEEEEBSSCEEEEE
T ss_pred CCCcEEEEecCCEEEEEEECCCCCCccceEEEEEC-CEEEEEEC--------CE----------e-eEcccccccccccc
Confidence 347899999999999999996 8999999999998 59999852 10 0 12457888999999
Q ss_pred eEEEEeCCEEEEEEeccC
Q 031640 123 ITAHIANSTLTVTVPKKD 140 (156)
Q Consensus 123 i~A~~~~GvL~I~~pK~~ 140 (156)
.+-.++++.|.|+|-|..
T Consensus 63 S~w~i~~~kv~i~L~K~~ 80 (131)
T 2o30_A 63 LWWVINGDVVDVNVTKKR 80 (131)
T ss_dssp EEEEEETTEEEEEEEESS
T ss_pred CEEEEeCCEEEEEEEECC
Confidence 999999999999999973
No 24
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=97.59 E-value=0.00078 Score=46.52 Aligned_cols=81 Identities=17% Similarity=0.140 Sum_probs=64.9
Q ss_pred CCCCccceEEeCCCeEEEEEEeC-C--CCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCc
Q 031640 42 MMIPTRIDWHDTPECHVFKADLS-G--FHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENA 118 (156)
Q Consensus 42 ~~~~p~~di~e~~~~y~i~~~lP-G--~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~v 118 (156)
+...+.+.+..+.+.+.|++.|| | ++.+++.|.+.. +.|.|..+-. . +.-...|...|
T Consensus 13 G~~~~~y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i~~-~~l~v~~kg~--------~----------~~~~g~L~~~I 73 (121)
T 3qor_A 13 GADLPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQR-RHLRVGLKGQ--------P----------AIIDGELYNEV 73 (121)
T ss_dssp SCBCSSCEEEECSSEEEEEEECCCSSCCCGGGEEEEEET-TEEEEEETTS--------C----------CSEEEEBSSCB
T ss_pred CCcCCCEEEEEccceEEEEEECCCCCcccccceEEEEEc-CEEEEEEcCc--------c----------eEEeccccccc
Confidence 34557899999999999999999 4 789999999998 5888864210 0 11244788899
Q ss_pred ccCceEEEEeCC-EEEEEEeccCC
Q 031640 119 MVDRITAHIANS-TLTVTVPKKDI 141 (156)
Q Consensus 119 d~~~i~A~~~~G-vL~I~~pK~~~ 141 (156)
+++...-.+++| .|.|+|-|.+.
T Consensus 74 ~~deS~w~i~~~~~i~i~L~K~~~ 97 (121)
T 3qor_A 74 KVEESSWLIADGAVVTVHLEKINK 97 (121)
T ss_dssp CGGGCEEEEETTTEEEEEEEBSSS
T ss_pred cccccEEEEcCCCEEEEEEEECCC
Confidence 999999999998 99999999764
No 25
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=97.56 E-value=0.001 Score=48.10 Aligned_cols=78 Identities=13% Similarity=0.209 Sum_probs=64.4
Q ss_pred CCccceEEeCCCeEEEEEEeC-CCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCc
Q 031640 44 IPTRIDWHDTPECHVFKADLS-GFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDR 122 (156)
Q Consensus 44 ~~p~~di~e~~~~y~i~~~lP-G~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~ 122 (156)
..+.+.+..+.+.+.|++.|| |++.++|.|.+.. +.|.|..+ +. .+ -...|...|+++.
T Consensus 12 ~~~~y~W~Qt~~eV~v~I~lp~~~~~kdv~V~i~~-~~L~v~~k--------g~----------~~-l~g~L~~~I~~ee 71 (157)
T 2rh0_A 12 GTPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQS-RHVALAVG--------GR----------EI-LKGKLFDSTIADE 71 (157)
T ss_dssp ECSSEEEEECSSEEEEEEECCTTCCGGGEEEEECS-SEEEEEET--------TE----------EE-EEEEBSSCBCGGG
T ss_pred CCCcEEEEecCCEEEEEEECCCCCcccceEEEEec-CEEEEEEC--------CE----------EE-EeeccccccCccc
Confidence 347899999999999999998 8999999999998 59999852 10 01 3457889999999
Q ss_pred eEEEEeCCE-EEEEEeccCC
Q 031640 123 ITAHIANST-LTVTVPKKDI 141 (156)
Q Consensus 123 i~A~~~~Gv-L~I~~pK~~~ 141 (156)
.+-+++++. |.|+|-|.+.
T Consensus 72 S~w~i~~~k~v~I~L~K~~~ 91 (157)
T 2rh0_A 72 GTWTLEDRKMVRIVLTKTKR 91 (157)
T ss_dssp CEEEEECCCEEEEEEEBSSC
T ss_pred cEEEEcCCcEEEEEEEEcCC
Confidence 999998885 9999999865
No 26
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=97.44 E-value=0.00027 Score=50.84 Aligned_cols=79 Identities=13% Similarity=0.254 Sum_probs=64.5
Q ss_pred CCccceEEeCCCeEEEEEEeCCCCCCCeEEEEe-CCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCc
Q 031640 44 IPTRIDWHDTPECHVFKADLSGFHKHDVKVEIE-DGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDR 122 (156)
Q Consensus 44 ~~p~~di~e~~~~y~i~~~lPG~~~edi~V~v~-~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~ 122 (156)
..|.+++..+.+.+.|+|.++++ ++++|.++ + +.|.+++. . .. + ..|.-.+.|-..|+++
T Consensus 3 ~~P~~~W~Qt~~~V~ltI~l~~~--~~v~V~~~~~-~~l~~~~~-~--~~--~----------~~y~~~l~L~~~Idpe- 63 (150)
T 2kmw_A 3 RNPEVLWAQRSDKVYLTVALPDA--KDISVKCEPQ-GLFSFSAL-G--AQ--G----------ERFEFSLELYGKIMTE- 63 (150)
T ss_dssp ECCCEEEEECSSEEEEEECCSSE--EEEEECCCTT-EEEEEEEE-T--TT--T----------EEEEEEEEBSSCEEEE-
T ss_pred cCCcEEEEeCCCEEEEEEEeCCC--CceEEEEecC-CEEEEEEE-c--CC--C----------ceEEEEeEhhhccccc-
Confidence 35789999999999999999998 57899998 6 58999986 1 11 1 1366778898889999
Q ss_pred eEEEEeCCEEEEEEeccCC
Q 031640 123 ITAHIANSTLTVTVPKKDI 141 (156)
Q Consensus 123 i~A~~~~GvL~I~~pK~~~ 141 (156)
.+.+.....++|+|.|+++
T Consensus 64 S~~~v~~~kIei~L~K~e~ 82 (150)
T 2kmw_A 64 YRKNVGLRNIIFSIQKEER 82 (150)
T ss_dssp EEEEEESSSEEEEEEECCS
T ss_pred ceEEecCCEEEEEEEECCC
Confidence 8888888889999999764
No 27
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=97.22 E-value=0.00016 Score=50.95 Aligned_cols=85 Identities=13% Similarity=0.285 Sum_probs=58.7
Q ss_pred CCccceEEeCCCe-------EEEEEEeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCC
Q 031640 44 IPTRIDWHDTPEC-------HVFKADLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPE 116 (156)
Q Consensus 44 ~~p~~di~e~~~~-------y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~ 116 (156)
..|.+.+..+.+. +.|++.+|+++ ++.|.++. +.|.+++.......... ...|.-.+.|..
T Consensus 5 ~~p~~~W~Q~~~~~~~~k~~V~ltI~~~~~~--~~~V~~~~-~~l~~~~~~~~~~g~~~---------~~~y~~~l~L~~ 72 (134)
T 2cg9_X 5 INPQVAWAQRSSTTDPERNYVLITVSIADCD--APELTIKP-SYIELKAQSKPHVGDEN---------VHHYQLHIDLYK 72 (134)
T ss_dssp ------CBCCCEEECCCSSEEEEECCCSSEE--SCCCCBCS-SEEEECCEEC----------------CEEBCEEEECSS
T ss_pred cCCCEEEEeCCCCcCCcCCEEEEEEEecCCC--ceEEEEEC-CEEEEEEecccccCCcc---------CceEEEEEEChh
Confidence 3466777777655 99999999974 88889987 59999876432100000 013667789999
Q ss_pred CcccCceEEEEeCCE-EEEEEeccC
Q 031640 117 NAMVDRITAHIANST-LTVTVPKKD 140 (156)
Q Consensus 117 ~vd~~~i~A~~~~Gv-L~I~~pK~~ 140 (156)
.|+++..+..+.++. |.|+|.|++
T Consensus 73 ~Idpe~S~~~v~~~~~vei~L~K~~ 97 (134)
T 2cg9_X 73 EIIPEKTMHKVANGQHYFLKLYKKD 97 (134)
T ss_dssp CCCSSSEEEEECCC--CEEEEEECS
T ss_pred hccccccEEEECCCEEEEEEEEECC
Confidence 999999999999998 999999987
No 28
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=88.70 E-value=2 Score=27.96 Aligned_cols=51 Identities=12% Similarity=0.053 Sum_probs=37.3
Q ss_pred CCCCCCccceEEeCCCeEEE----------------------EEEeC-CCCCCCeEEEEeCCcEEEEEEEEeccc
Q 031640 40 PPMMIPTRIDWHDTPECHVF----------------------KADLS-GFHKHDVKVEIEDGRVLCISGEKKIEK 91 (156)
Q Consensus 40 ~~~~~~p~~di~e~~~~y~i----------------------~~~lP-G~~~edi~V~v~~~~~L~I~g~~~~~~ 91 (156)
.++...-.++|.-+++.+.| .+.|| +++.+.++-++++| .|+|+..+....
T Consensus 24 lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~er~~g~f~R~~~LP~~vd~~~i~A~~~~G-vL~I~lpK~~~~ 97 (102)
T 4fei_A 24 VPGVDAGTLALAEDGGQLTVSGERPGTEHLLRSERPSGRFVRELAFPEPVRPASGVASLAGG-VLTVRFEKLRPT 97 (102)
T ss_dssp CTTCCGGGCEEEEETTEEEEEEEECCCSSCSSCCSEEEEEEEEEECSSCBCTTCCEEEEETT-EEEEEEEBSSCC
T ss_pred CCCCchHhEEEEEECCEEEEEEEEecCCCEEEEEEeccEEEEEEECCCCcchhHcEEEEECC-EEEEEEEccCcc
Confidence 35555556666666665555 57899 68999999999997 999998765543
No 29
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=84.45 E-value=2.5 Score=26.55 Aligned_cols=33 Identities=9% Similarity=0.205 Sum_probs=28.6
Q ss_pred eEEEEEECCCCcccCceEEEEeCCEEEEEEeccC
Q 031640 107 KFSRRFQLPENAMVDRITAHIANSTLTVTVPKKD 140 (156)
Q Consensus 107 ~f~r~~~LP~~vd~~~i~A~~~~GvL~I~~pK~~ 140 (156)
.|.-.+.|| +++++.|+-.+++|.|+|..-+..
T Consensus 8 ~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~~ 40 (85)
T 3q9p_A 8 RWRVSLDVN-HFAPDELTVKTKDGVVEITGKHAA 40 (85)
T ss_dssp EEEEEEECT-TTCCSEEEEEEETTEEEEEEEEC-
T ss_pred EEEEEEECC-CCChHHEEEEEECCEEEEEEEEcc
Confidence 477888998 799999999999999999987654
No 30
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=81.97 E-value=6.3 Score=25.18 Aligned_cols=32 Identities=19% Similarity=0.158 Sum_probs=26.2
Q ss_pred eEEEEEEeC-CCCCCCeEEEEeCCcEEEEEEEEe
Q 031640 56 CHVFKADLS-GFHKHDVKVEIEDGRVLCISGEKK 88 (156)
Q Consensus 56 ~y~i~~~lP-G~~~edi~V~v~~~~~L~I~g~~~ 88 (156)
.|.-.+.|| +++.+.++-++++| .|+|+..+.
T Consensus 65 ~f~r~~~LP~~vd~~~i~A~~~~G-vL~I~~pK~ 97 (100)
T 3gla_A 65 SFHRRFALPDSADADGITAAGRNG-VLEIRIPKR 97 (100)
T ss_dssp EEEEEEECCTTBCTTSCEEEEETT-EEEEEEEBC
T ss_pred EEEEEEECCCCcChHHeEEEEeCC-EEEEEEecC
Confidence 455578898 58999999999997 999997654
No 31
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=76.26 E-value=5.5 Score=25.16 Aligned_cols=33 Identities=9% Similarity=0.263 Sum_probs=28.6
Q ss_pred eEEEEEECCCCcccCceEEEEeCCEEEEEEeccC
Q 031640 107 KFSRRFQLPENAMVDRITAHIANSTLTVTVPKKD 140 (156)
Q Consensus 107 ~f~r~~~LP~~vd~~~i~A~~~~GvL~I~~pK~~ 140 (156)
.|.-.+.|| +++.+.|+-.++++.|+|..-+..
T Consensus 7 ~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~~ 39 (90)
T 2y1y_A 7 RFSVNLDVK-HFSPEELKVKVLGDVIEVHGKHEE 39 (90)
T ss_dssp CEEEEEECT-TSCGGGEEEEEETTEEEEEEEEEE
T ss_pred EEEEEEECC-CCcHHHeEEEEECCEEEEEEEEec
Confidence 477788999 899999999999999999987643
No 32
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=74.25 E-value=6.7 Score=25.35 Aligned_cols=33 Identities=12% Similarity=0.247 Sum_probs=28.8
Q ss_pred eEEEEEECCCCcccCceEEEEeCCEEEEEEeccC
Q 031640 107 KFSRRFQLPENAMVDRITAHIANSTLTVTVPKKD 140 (156)
Q Consensus 107 ~f~r~~~LP~~vd~~~i~A~~~~GvL~I~~pK~~ 140 (156)
.|.-.+.|| +++++.|+-.+++|.|+|..-+..
T Consensus 12 ~~~v~~dlP-G~~~edI~V~v~~~~L~I~g~~~~ 44 (101)
T 2wj5_A 12 YFSVLLDVK-HFSPEEISVKVVGDHVEVHARHEE 44 (101)
T ss_dssp CEEEEEECT-TSCGGGEEEEEETTEEEEEEEEEE
T ss_pred EEEEEEECC-CCcHHHeEEEEECCEEEEEEEEec
Confidence 466788999 899999999999999999987754
No 33
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=73.96 E-value=6.4 Score=25.73 Aligned_cols=32 Identities=9% Similarity=0.168 Sum_probs=28.0
Q ss_pred eEEEEEECCCCcccCceEEEEeCCEEEEEEecc
Q 031640 107 KFSRRFQLPENAMVDRITAHIANSTLTVTVPKK 139 (156)
Q Consensus 107 ~f~r~~~LP~~vd~~~i~A~~~~GvL~I~~pK~ 139 (156)
.|.-.+.|| +++++.|+-.+++|.|+|.-.+.
T Consensus 13 ~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~ 44 (106)
T 3l1e_A 13 KFVIFLDVK-HFSPEDLTVKVQEDFVEIHGKHN 44 (106)
T ss_dssp EEEEEEECT-TSCGGGEEEEEETTEEEEEEEEE
T ss_pred EEEEEEECC-CCChHHEEEEEECCEEEEEEEEc
Confidence 477788998 79999999999999999998653
No 34
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=73.20 E-value=5.7 Score=27.92 Aligned_cols=34 Identities=18% Similarity=0.171 Sum_probs=27.4
Q ss_pred eEEEEEEeC-CCCCCCeEEEEeCCcEEEEEEEEecc
Q 031640 56 CHVFKADLS-GFHKHDVKVEIEDGRVLCISGEKKIE 90 (156)
Q Consensus 56 ~y~i~~~lP-G~~~edi~V~v~~~~~L~I~g~~~~~ 90 (156)
.|.-++.|| +++.+.|+-++++| .|+|+..+...
T Consensus 118 ~f~R~~~LP~~vd~~~i~A~~~nG-vL~I~lpK~~~ 152 (161)
T 4eld_A 118 EIYRTIKLPATVKEENASAKFENG-VLSVILPKAES 152 (161)
T ss_dssp EEEEEEECSSCBCGGGCEEEEETT-EEEEEEEBCGG
T ss_pred cEEEEEECCCCcccccEEEEEECC-EEEEEEEcCCC
Confidence 344567898 78999999999987 99999877544
No 35
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=71.57 E-value=11 Score=25.16 Aligned_cols=33 Identities=12% Similarity=0.179 Sum_probs=27.8
Q ss_pred EEEEEECCCCcccCceEEEEeC-CEEEEEEeccCC
Q 031640 108 FSRRFQLPENAMVDRITAHIAN-STLTVTVPKKDI 141 (156)
Q Consensus 108 f~r~~~LP~~vd~~~i~A~~~~-GvL~I~~pK~~~ 141 (156)
|.-.+.|| +++.+.|+-.+++ +.|+|..-+...
T Consensus 36 ~~v~~~lP-G~~~edi~V~v~~~~~L~I~g~~~~~ 69 (123)
T 3aab_A 36 LVVVADLA-GFNKEKIKARVSGQNELIIEAEREIT 69 (123)
T ss_dssp EEEEEECC-SCCGGGCEEEEETTTEEEEEEECCCC
T ss_pred EEEEEECC-CCCHHHEEEEEeCCCEEEEEEEEecc
Confidence 55567898 7999999999999 999999987654
No 36
>1nkw_E 50S ribosomal protein L6; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} SCOP: i.1.1.2 PDB: 1sm1_E*
Probab=67.24 E-value=15 Score=27.37 Aligned_cols=45 Identities=24% Similarity=0.417 Sum_probs=31.3
Q ss_pred CCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceEEEEeCCEEEEEEec
Q 031640 68 KHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHIANSTLTVTVPK 138 (156)
Q Consensus 68 ~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~~GvL~I~~pK 138 (156)
|+.|+|++++ +.++|+|.+ |...+.| +. .++...+||.|.|..+.
T Consensus 39 P~gV~V~i~~-~~VtVKGPk------------------G~L~~~~--~~-----~v~i~~e~~~i~v~~~~ 83 (212)
T 1nkw_E 39 PSGVTVNAQD-GVFKVKGPK------------------GELTVPY--NT-----ELTVRQDGDQLLVERPS 83 (212)
T ss_pred CCCcEEEEeC-CEEEEECCC------------------EEEEEEC--CC-----CeEEEEECCEEEEEcCC
Confidence 4788899986 699999863 4454444 43 35566789998887654
No 37
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=66.80 E-value=10 Score=26.38 Aligned_cols=34 Identities=26% Similarity=0.258 Sum_probs=27.6
Q ss_pred eEEEEEEeC-CCCCCCeEEEEeCCcEEEEEEEEecc
Q 031640 56 CHVFKADLS-GFHKHDVKVEIEDGRVLCISGEKKIE 90 (156)
Q Consensus 56 ~y~i~~~lP-G~~~edi~V~v~~~~~L~I~g~~~~~ 90 (156)
.|.-.+.|| +++.+.|+-++++| .|+|+..+...
T Consensus 105 ~F~R~~~LP~~vd~~~i~A~~~nG-vL~I~lPK~~~ 139 (151)
T 1gme_A 105 KFVRRFRLLEDAKVEEVKAGLENG-VLTVTVPKAEV 139 (151)
T ss_dssp CEEEEEECSSCCCGGGCEEEEETT-EEEEEEECCCC
T ss_pred EEEEEEECCCCccccceEEEEECC-EEEEEEEccCc
Confidence 355578898 78999999999997 99999876543
No 38
>1rl6_A Protein (ribosomal protein L6); RNA-binding protein, gentamicin resistance, alpha/beta protein; 2.00A {Geobacillus stearothermophilus} SCOP: d.141.1.1 d.141.1.1 PDB: 1giy_H 1ml5_h* 1c04_B 1yl3_H 2b66_H 2b9n_H 2b9p_H 1eg0_J 487d_J
Probab=66.51 E-value=13 Score=26.91 Aligned_cols=45 Identities=24% Similarity=0.482 Sum_probs=31.6
Q ss_pred CCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceEEEEeCCEEEEEEec
Q 031640 68 KHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHIANSTLTVTVPK 138 (156)
Q Consensus 68 ~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~~GvL~I~~pK 138 (156)
|+.++|++++ +.++|+|. .|...+.| +. .++...+|+.|.|..+.
T Consensus 11 P~gV~V~i~~-~~VtVkGp------------------kG~L~~~~--~~-----~v~i~~~~~~l~v~~~~ 55 (177)
T 1rl6_A 11 PAGVTVTVNG-NTVTVKGP------------------KGELTRTF--HP-----DMTITVEGNVITVTRPS 55 (177)
T ss_dssp CTTCEEEEET-TEEEEEET------------------TEEEEEEC--CT-----TCEEEEETTEEEEECSC
T ss_pred CCCCEEEEeC-CEEEEECC------------------CeEEEEEc--CC-----CEEEEEeCCEEEEEcCC
Confidence 4788999986 69999975 34555544 53 34566789998887553
No 39
>2cql_A OK/SW-CL.103, 60S ribosomal protein L9; N-terminal domain, alpha and beta (A+B), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.141.1.1
Probab=65.34 E-value=10 Score=24.77 Aligned_cols=18 Identities=17% Similarity=0.514 Sum_probs=15.2
Q ss_pred CCCeEEEEeCCcEEEEEEE
Q 031640 68 KHDVKVEIEDGRVLCISGE 86 (156)
Q Consensus 68 ~edi~V~v~~~~~L~I~g~ 86 (156)
|+.++|++++ +.++|+|.
T Consensus 20 P~gV~V~i~~-~~VtVKGP 37 (100)
T 2cql_A 20 PENVDITLKG-RTVIVKGP 37 (100)
T ss_dssp CSSCEEEEET-TEEEEEET
T ss_pred CCCCEEEEeC-CEEEEECC
Confidence 4788999997 69999985
No 40
>2nwt_A UPF0165 protein AF_2212; HOMO dimer protein, GFT structural genomics, PSI-2, protein structure initiative; NMR {Archaeoglobus fulgidus} SCOP: b.129.2.2
Probab=60.42 E-value=6.6 Score=24.10 Aligned_cols=15 Identities=20% Similarity=0.111 Sum_probs=12.3
Q ss_pred CceEEEEeCCEEEEE
Q 031640 121 DRITAHIANSTLTVT 135 (156)
Q Consensus 121 ~~i~A~~~~GvL~I~ 135 (156)
..|.|.|+||||.-.
T Consensus 3 k~IeAiYEnGVfkPL 17 (69)
T 2nwt_A 3 KIIEAVYENGVFKPL 17 (69)
T ss_dssp CCEEEEEETTEEEES
T ss_pred ceEEEEEECCEEeEC
Confidence 469999999998743
No 41
>1vq8_E 50S ribosomal protein L6P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.141.1.1 d.141.1.1 PDB: 1vq4_E* 1vq5_E* 1vq6_E* 1vq7_E* 1s72_E* 1vq9_E* 1vqk_E* 1vql_E* 1vqm_E* 1vqn_E* 1vqo_E* 1vqp_E* 1yhq_E* 1yi2_E* 1yij_E* 1yit_E* 1yj9_E* 1yjn_E* 1yjw_E* 2otj_E* ...
Probab=58.22 E-value=19 Score=26.07 Aligned_cols=46 Identities=20% Similarity=0.352 Sum_probs=31.4
Q ss_pred CCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceEEEEeCCEEEEEEec
Q 031640 68 KHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHIANSTLTVTVPK 138 (156)
Q Consensus 68 ~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~~GvL~I~~pK 138 (156)
|+.++|++++ +.++|+|. .|...+.|. +. .++...++|.|.|..+.
T Consensus 9 P~gV~v~i~~-~~vtVkGp------------------kG~L~~~~~-~~-----~v~i~~~~~~i~v~~~~ 54 (178)
T 1vq8_E 9 PEDVDAEQDH-LDITVEGD------------------NGSVTRRLW-YP-----DIDVSVDGDTVVIESDE 54 (178)
T ss_dssp CTTCEEEEET-TEEEEEET------------------TEEEEEECC-CT-----TCEEEEETTEEEEECSC
T ss_pred CCCCEEEEeC-CEEEEECC------------------CeEEEEEEE-CC-----eEEEEEECCEEEEEcCC
Confidence 4788999986 69999985 344555442 32 35566789998887553
No 42
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=57.00 E-value=15 Score=26.42 Aligned_cols=33 Identities=9% Similarity=0.263 Sum_probs=28.2
Q ss_pred eEEEEEECCCCcccCceEEEEeCCEEEEEEeccC
Q 031640 107 KFSRRFQLPENAMVDRITAHIANSTLTVTVPKKD 140 (156)
Q Consensus 107 ~f~r~~~LP~~vd~~~i~A~~~~GvL~I~~pK~~ 140 (156)
.|.-.+.|| +++++.|+-++++|.|+|.-.+.+
T Consensus 74 ~~~v~~dlP-G~~~edI~V~v~~~~L~I~g~~~~ 106 (175)
T 2klr_A 74 RFSVNLDVK-HFSPEELKVKVLGDVIEVHGKHEE 106 (175)
T ss_dssp EEEEEECCS-SCCGGGEEEEEETTEEEEEEEEEE
T ss_pred eEEEEEECC-CCChHHEEEEEECCEEEEEEEEcc
Confidence 466778898 899999999999999999987644
No 43
>3j21_F 50S ribosomal protein L6P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=56.92 E-value=19 Score=26.18 Aligned_cols=44 Identities=20% Similarity=0.380 Sum_probs=29.8
Q ss_pred CCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceEEEEeCCEEEEEE
Q 031640 68 KHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHIANSTLTVTV 136 (156)
Q Consensus 68 ~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~~GvL~I~~ 136 (156)
|++++|++++ +.++|+|. .|...+.|.-| .++...+++.|.|..
T Consensus 14 P~gV~v~i~~-~~V~VkGp------------------kG~L~~~~~~~------~v~i~~~~~~l~v~~ 57 (184)
T 3j21_F 14 PEGVEVTVEG-YKVKVKGP------------------KGELEREFFWP------GIQIFTEDGNVVIYK 57 (184)
T ss_dssp CSSCEEEESS-SEEEEECS------------------SCEEEEECCCT------TCEEEEETTEEEEEC
T ss_pred CCCcEEEEeC-CEEEEEcC------------------CeEEEEEecCC------cEEEEEeCCEEEEEE
Confidence 3789999986 79999975 34455544212 245567889888874
No 44
>3v2d_H 50S ribosomal protein L6; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_F 2hgj_H 2hgq_H 2hgu_H 1vsa_F 2j03_H 2jl6_H 2jl8_H 2v47_H 2v49_H 2wdi_H 2wdj_H 2wdl_H 2wdn_H 2wh2_H 2wh4_H 2wrj_H 2wrl_H 2wro_H 2wrr_H ...
Probab=48.19 E-value=40 Score=24.31 Aligned_cols=43 Identities=14% Similarity=0.265 Sum_probs=30.0
Q ss_pred CCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceEEEEeCCEEEEEE
Q 031640 68 KHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHIANSTLTVTV 136 (156)
Q Consensus 68 ~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~~GvL~I~~ 136 (156)
|++++|++++ +.++|+|. .|...+. |+.. ++...+++.|.|..
T Consensus 12 P~gV~v~i~~-~~v~VkGp------------------kG~L~~~--~~~~-----v~i~~~~~~l~v~~ 54 (180)
T 3v2d_H 12 PKGVSVEVAP-GRVKVKGP------------------KGELEVP--VSPE-----MRVVVEEGVVRVER 54 (180)
T ss_dssp CTTCEEEEET-TEEEEECS------------------SCEEEEE--CCTT-----SEEEEETTEEEEEC
T ss_pred CCCcEEEEeC-CEEEEEeC------------------CcEEEEE--eCCC-----EEEEEECCEEEEEE
Confidence 5789999986 69999975 3445454 4433 44557899888874
No 45
>3iz5_F 60S ribosomal protein L9 (L6P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_F
Probab=46.61 E-value=45 Score=24.28 Aligned_cols=45 Identities=20% Similarity=0.374 Sum_probs=30.3
Q ss_pred CCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceEEEE--eCCEEEEEEe
Q 031640 68 KHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHI--ANSTLTVTVP 137 (156)
Q Consensus 68 ~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~--~~GvL~I~~p 137 (156)
|++++|++++ +.++|+|. .|...+. ++. ..++..+ +++.|.|..+
T Consensus 13 P~gV~v~i~~-~~V~VkGP------------------kG~L~~~--~~~----~~v~i~~~~~~~~l~v~~~ 59 (190)
T 3iz5_F 13 PEGVTVQVAA-KVVTVEGP------------------RGKLTRN--FKH----LNLDFQLLEGGRKLQVDAW 59 (190)
T ss_dssp CTTCEEEEET-TEEEEEET------------------TEEEEEE--CCC----TTEEEEEETTTTEEEEEES
T ss_pred CCCCEEEEeC-CEEEEECC------------------CceEEEE--ccC----CcEEEEEEcCCCEEEEEEC
Confidence 4789999986 79999975 3445454 331 2344556 7888888764
No 46
>3u5e_H L8, RP24, YL11, 60S ribosomal protein L9-A; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_F 1s1i_H 3izs_F* 3j16_F 3o5h_I 3o58_I 3u5i_H 4b6a_H 3jyw_H
Probab=39.62 E-value=68 Score=23.33 Aligned_cols=46 Identities=24% Similarity=0.437 Sum_probs=30.6
Q ss_pred CCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceEEE-EeCCEEEEEEec
Q 031640 68 KHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAH-IANSTLTVTVPK 138 (156)
Q Consensus 68 ~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~-~~~GvL~I~~pK 138 (156)
|++++|++++ +.++|+|. .|...+. ++. . .+.-. .+++.|.|..+-
T Consensus 13 P~gV~v~i~~-~~V~VkGP------------------kG~L~~~--~~~-~---~v~i~~~~~~~l~v~~~~ 59 (191)
T 3u5e_H 13 PEGVTVSIKS-RIVKVVGP------------------RGTLTKN--LKH-I---DVTFTKVNNQLIKVAVHN 59 (191)
T ss_dssp CTTCEEEEET-TEEEEEET------------------TEEEEEE--CTT-T---CCEEEEEETTEEEEEEEE
T ss_pred CCCcEEEEeC-CEEEEEcC------------------CeEEEEE--ccC-C---cEEEEEecCCeEEEEECC
Confidence 4889999986 79999975 3445443 442 1 33444 468988888653
No 47
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=37.83 E-value=85 Score=20.90 Aligned_cols=32 Identities=13% Similarity=0.226 Sum_probs=24.6
Q ss_pred eeEEEEEECCCCcccCceEEEEeCCEEEEEEe
Q 031640 106 GKFSRRFQLPENAMVDRITAHIANSTLTVTVP 137 (156)
Q Consensus 106 ~~f~r~~~LP~~vd~~~i~A~~~~GvL~I~~p 137 (156)
....-+|.||.+++.+.+...++..-|.|.+.
T Consensus 14 ~~V~i~I~lp~~~~~kdv~V~i~~~~l~v~~~ 45 (131)
T 2o30_A 14 NEINIQFPVTGDADSSAIKIRMVGKKICVKNQ 45 (131)
T ss_dssp TEEEEEEECC---CCSCEEEEEETTEEEEEET
T ss_pred CEEEEEEECCCCCCccceEEEEECCEEEEEEC
Confidence 34667889999999999999999999999873
No 48
>3bbo_I Ribosomal protein L6; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=36.32 E-value=17 Score=27.35 Aligned_cols=46 Identities=17% Similarity=0.297 Sum_probs=30.4
Q ss_pred CCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceEE-EEeCCEEEEEEec
Q 031640 67 HKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITA-HIANSTLTVTVPK 138 (156)
Q Consensus 67 ~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A-~~~~GvL~I~~pK 138 (156)
=|++|+|++++ +.++|+|. .|...+ .|+..+ +. ..+||.|.|..+.
T Consensus 53 IP~gV~V~i~~-~~VtVKGP------------------kG~L~~--~~~~~v-----~i~~~e~~~i~v~~~~ 99 (223)
T 3bbo_I 53 VPSNVTIALEG-QDLKVKGP------------------LGELAL--TYPREV-----ELTKEESGFLRVKKTV 99 (223)
T ss_dssp CSTTSCEEESS-SEEEECCS------------------SCCEEE--ECCSSC-----EEEECSSSCEEEECSS
T ss_pred cCCCCEEEEeC-CEEEEECC------------------CeEEEE--EcCCCE-----EEEEecCCEEEEEcCC
Confidence 34788899986 69999975 334444 345443 44 5688888887554
No 49
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=33.92 E-value=90 Score=20.98 Aligned_cols=30 Identities=27% Similarity=0.397 Sum_probs=20.3
Q ss_pred ceEEEE---eCCEEEEEEeccCCCCCCCCceEEEeee
Q 031640 122 RITAHI---ANSTLTVTVPKKDIKKHHGHSRSIKITG 155 (156)
Q Consensus 122 ~i~A~~---~~GvL~I~~pK~~~~~~~~~~~~I~I~~ 155 (156)
+|+..| .||+|.|++--....+. ..|.|+.
T Consensus 99 ~IeVtf~iD~nGiL~V~a~d~~tg~~----~~i~i~~ 131 (135)
T 1q5l_A 99 QIEVTFDIDADGILHVSAKDKNSGKE----QKITIKA 131 (135)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTCCE----EEEEEEC
T ss_pred EEEEEEEECCCCEEEEEEEECCCCCE----EEEEEec
Confidence 566666 89999999864443333 6777754
No 50
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=33.69 E-value=1.2e+02 Score=21.03 Aligned_cols=33 Identities=12% Similarity=0.223 Sum_probs=27.8
Q ss_pred eeeEEEEEECCCCcccCceEEEEeCCEEEEEEe
Q 031640 105 VGKFSRRFQLPENAMVDRITAHIANSTLTVTVP 137 (156)
Q Consensus 105 ~~~f~r~~~LP~~vd~~~i~A~~~~GvL~I~~p 137 (156)
.....-+|.||.++..+.+...++..-|+|.+.
T Consensus 22 ~~eV~v~I~lp~~~~~kdv~V~i~~~~L~v~~k 54 (157)
T 2rh0_A 22 LEEVFIEVQVPPGTRAQDIQCGLQSRHVALAVG 54 (157)
T ss_dssp SSEEEEEEECCTTCCGGGEEEEECSSEEEEEET
T ss_pred CCEEEEEEECCCCCcccceEEEEecCEEEEEEC
Confidence 345677899999999999999999999999873
No 51
>3iln_A Laminarinase; jelly ROW, hydrolase, family 16 glycosyl hydrolase; 1.95A {Rhodothermus marinus}
Probab=33.60 E-value=66 Score=23.98 Aligned_cols=47 Identities=21% Similarity=0.323 Sum_probs=26.9
Q ss_pred CCCeEEEEeCCcEEEEEEEEecc--cccCCccEEE---EeeeeeeEEEEEECCCC
Q 031640 68 KHDVKVEIEDGRVLCISGEKKIE--KEERTDEGHR---LEVAVGKFSRRFQLPEN 117 (156)
Q Consensus 68 ~edi~V~v~~~~~L~I~g~~~~~--~~~~~~~~~~---~e~~~~~f~r~~~LP~~ 117 (156)
+++ |.+++| .|+|++.+..- ..-....+.. ....+|.|+-++.||..
T Consensus 46 ~~n--v~v~~G-~L~i~~~~~~~~~~~~tS~~i~t~~~~~~~yG~~e~r~k~p~g 97 (251)
T 3iln_A 46 IEN--ARVGGG-VLIIEARRESYEGREYTSARLVTRGKASWTYGRFEIRARLPSG 97 (251)
T ss_dssp TTT--EEEETT-EEEEEEEEEEETTEEEEECEEECTTTCCBSSEEEEEEEECCCS
T ss_pred CcC--EEEECC-EEEEEEEeccCCCCCEEEEEEEECCcccccceEEEEEEEccCC
Confidence 455 455676 89999877631 1111111111 12456889989999964
No 52
>2zkr_e 60S ribosomal protein L9; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=33.48 E-value=52 Score=23.96 Aligned_cols=52 Identities=13% Similarity=0.205 Sum_probs=32.7
Q ss_pred EeCCCCCCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceEEEEeCCE---EEEEEec
Q 031640 62 DLSGFHKHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHIANST---LTVTVPK 138 (156)
Q Consensus 62 ~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~~Gv---L~I~~pK 138 (156)
..|=-=|+.++|++++ +.++|+|. .|...+ .+|.. .++...++|. |.|..+.
T Consensus 7 k~pI~IP~gV~V~i~~-~~VtVkGp------------------kG~L~~--~~~~~----~v~i~~~~~~~~~i~v~~~~ 61 (192)
T 2zkr_e 7 NQTVDIPENVDITLKG-RTVIVKGP------------------RGTLRR--DFNHI----NVELSLLGKKKKRLRVDKWW 61 (192)
T ss_dssp ---CCCCTTCEEEEET-TEEEEEET------------------TEEEEE--ECCSS----SCEEEEETTTTCEEEEECSC
T ss_pred cCcEEcCCCCEEEEeC-CEEEEECC------------------CeEEEE--EeCCC----CEEEEEecCceeEEEEEcCC
Confidence 3343446889999997 69999985 344444 44431 3556678887 7776543
No 53
>1n91_A ORF, hypothetical protein; alpha+beta, northeast structural genomics consortium, PSI, P structure initiative, NESG; NMR {Escherichia coli} SCOP: d.206.1.1 PDB: 1yh5_A
Probab=33.34 E-value=96 Score=20.42 Aligned_cols=38 Identities=3% Similarity=-0.002 Sum_probs=27.6
Q ss_pred eEEeCCCeEEEEEEe-CCCCCCCeEEEEeCCcEEEEEEEEe
Q 031640 49 DWHDTPECHVFKADL-SGFHKHDVKVEIEDGRVLCISGEKK 88 (156)
Q Consensus 49 di~e~~~~y~i~~~l-PG~~~edi~V~v~~~~~L~I~g~~~ 88 (156)
-+.+.++.+.|.+.+ ||.+++.|. .+.++ .|.|.-.-.
T Consensus 7 ~~~~~~~~v~l~v~V~P~A~r~~I~-g~~~~-~LkV~v~Ap 45 (108)
T 1n91_A 7 AVTVNDDGLVLRLYIQPKASRDSIV-GLHGD-EVKVAITAP 45 (108)
T ss_dssp SEEECSSEEEEEEEEECSSSSCEEE-EECSS-CEEEECCCC
T ss_pred eEEECCCeEEEEEEEeeCCCcceee-cccCC-EEEEEEecC
Confidence 356778889998877 999999873 46654 787775433
No 54
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=31.97 E-value=25 Score=23.18 Aligned_cols=16 Identities=31% Similarity=0.434 Sum_probs=14.1
Q ss_pred ceEEEEeCCEEEEEEe
Q 031640 122 RITAHIANSTLTVTVP 137 (156)
Q Consensus 122 ~i~A~~~~GvL~I~~p 137 (156)
.+.+.+.+|||+|+++
T Consensus 29 d~D~e~~~gVLti~f~ 44 (106)
T 1ew4_A 29 DIDCEINGGVLTITFE 44 (106)
T ss_dssp CCEEEEETTEEEEECT
T ss_pred CEeeeccCCEEEEEEC
Confidence 3788999999999996
No 55
>3r8s_G 50S ribosomal protein L6; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_E 1p86_E 2awb_G 2aw4_G 2i2v_G 2j28_G 2i2t_G* 2qao_G* 2qba_G* 2qbc_G* 2qbe_G 2qbg_G 2qbi_G* 2qbk_G* 2qov_G 2qox_G 2qoz_G* 2qp1_G* 2rdo_G 2vhm_G ...
Probab=31.79 E-value=24 Score=25.44 Aligned_cols=42 Identities=31% Similarity=0.541 Sum_probs=28.8
Q ss_pred CCCeEEEEeCCcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceEEEEeCCEEEEE
Q 031640 68 KHDVKVEIEDGRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHIANSTLTVT 135 (156)
Q Consensus 68 ~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~~GvL~I~ 135 (156)
|++++|++++ +.++|+|.+ |...+. ++. .++...+++.|.|.
T Consensus 11 P~gV~v~i~~-~~V~VkGpk------------------G~L~~~--~~~-----~v~i~~~~~~l~v~ 52 (176)
T 3r8s_G 11 PAGVDVKING-QVITIKGKN------------------GELTRT--LND-----AVEVKHADNTLTFG 52 (176)
T ss_dssp CTTCCCEESS-SEEECCBTT------------------BCCEEE--CCS-----SCEEEEETTEEEEE
T ss_pred CCCcEEEEeC-CEEEEEcCC------------------EEEEEE--CCC-----CEEEEEeCCEEEEE
Confidence 4788899986 689998753 334443 453 35556788988887
No 56
>2ks0_A Uncharacterized protein; YABP family, structural genomi 2, protein structure initiative, northeast structural genom consortium; NMR {Desulfitobacterium hafniense} PDB: 2kyi_A 3ipf_A
Probab=31.30 E-value=29 Score=21.25 Aligned_cols=23 Identities=39% Similarity=0.671 Sum_probs=18.2
Q ss_pred CCCCCCCeEEEEeCCcEEEEEEEE
Q 031640 64 SGFHKHDVKVEIEDGRVLCISGEK 87 (156)
Q Consensus 64 PG~~~edi~V~v~~~~~L~I~g~~ 87 (156)
--|+.+.|.+...-| .|.|+|+.
T Consensus 16 ~sFd~e~i~L~T~~G-~L~IkG~~ 38 (71)
T 2ks0_A 16 QSFDPKEILLETIQG-VLSIKGEK 38 (71)
T ss_dssp EEECSSEEEEEETTE-EEEEEEEC
T ss_pred EEECCCEEEEEeCce-EEEEEcCC
Confidence 346788888888876 89999874
No 57
>4awd_A Beta-porphyranase; hydrolase; 2.40A {Bacteroides plebeius}
Probab=30.49 E-value=1.2e+02 Score=23.70 Aligned_cols=48 Identities=19% Similarity=0.229 Sum_probs=29.8
Q ss_pred CCCCeEEEEeCCcEEEEEEEEecccccC-C---ccE-------EEE--eeeeeeEEEEEECCCC
Q 031640 67 HKHDVKVEIEDGRVLCISGEKKIEKEER-T---DEG-------HRL--EVAVGKFSRRFQLPEN 117 (156)
Q Consensus 67 ~~edi~V~v~~~~~L~I~g~~~~~~~~~-~---~~~-------~~~--e~~~~~f~r~~~LP~~ 117 (156)
+++++.| ++| .|+|++.+....... + ..| ..+ ...+|.|+-++.||..
T Consensus 85 ~~~Nv~v--~dG-~L~I~a~~~~~~~~~~G~~~~~ytsasg~i~Sk~~~~~yG~~E~r~Klp~~ 145 (324)
T 4awd_A 85 KAENVSV--KKG-CLRIINTVLSPTEGLDGKPGDKYRLAGGAVASVKNQAHYGYYETRMKASLT 145 (324)
T ss_dssp CGGGEEE--ETT-EEEEECEEEEEEECGGGCBSSSEEEEECEEEESCCCBCSEEEEEEEECCSS
T ss_pred cchhEEE--ECC-EEEEEEEeCCCCcccCCcccccEEEEEEEEEECCccccCcEEEEEEECCCC
Confidence 5667555 577 999999887431100 1 012 111 2557899999999975
No 58
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=28.45 E-value=1.3e+02 Score=19.75 Aligned_cols=33 Identities=12% Similarity=0.311 Sum_probs=27.7
Q ss_pred eeeEEEEEECCCCc-ccCceEEEEeCCEEEEEEe
Q 031640 105 VGKFSRRFQLPENA-MVDRITAHIANSTLTVTVP 137 (156)
Q Consensus 105 ~~~f~r~~~LP~~v-d~~~i~A~~~~GvL~I~~p 137 (156)
.....-+|.||.++ +.+.+...++..-|.|.+.
T Consensus 28 ~~~V~i~I~lp~~~~~~kdv~V~i~~~~l~v~~~ 61 (124)
T 1wgv_A 28 YTDLEVRVPVPKHVVKGKQVSVALSSSSIRVAML 61 (124)
T ss_dssp TTEEEEEEECCTTCCSGGGEEEEECSSEEEEEEE
T ss_pred ccEEEEEEEcCCCCCchhheEEEEEcCEEEEEEE
Confidence 34566788999888 8999999999999999874
No 59
>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} PDB: 2uwc_A 2uwb_A 2vh9_A*
Probab=27.82 E-value=1.2e+02 Score=23.09 Aligned_cols=43 Identities=16% Similarity=0.150 Sum_probs=25.9
Q ss_pred CCCCeEEEEeCCcEEEEEEEEecccccCCccEE-EEeeeeeeEEEEEECCCC
Q 031640 67 HKHDVKVEIEDGRVLCISGEKKIEKEERTDEGH-RLEVAVGKFSRRFQLPEN 117 (156)
Q Consensus 67 ~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~~-~~e~~~~~f~r~~~LP~~ 117 (156)
.++++.| ++| .|+|++.+.. ...+. .....+|.|+-++.||.+
T Consensus 31 ~~~Nv~v--~~G-~L~L~~~k~t-----sa~i~Sk~~~~yG~~Ear~Klp~g 74 (274)
T 2uwa_A 31 GPQHQRV--DQG-SLTIWLDSTS-----GSGFKSINRYRSGYFGANIKLQSG 74 (274)
T ss_dssp CGGGEEE--ETT-EEEEEECSSC-----CEEEEEEEEEEEEEEEEEEECCCS
T ss_pred CCCCEEE--ECC-EEEEEEecCC-----CCEEEECceEeeEEEEEEEEeCCC
Confidence 3456554 565 5777765321 12221 234668999999999975
No 60
>3oeq_A Frataxin homolog, mitochondrial; alpha/beta sandwich, metallochaperone, iron-storage, transpo protein; 2.96A {Saccharomyces cerevisiae} SCOP: d.82.2.1 PDB: 2fql_A 3oer_A 2ga5_A
Probab=26.27 E-value=49 Score=22.41 Aligned_cols=15 Identities=13% Similarity=0.470 Sum_probs=13.6
Q ss_pred eEEEEeCCEEEEEEe
Q 031640 123 ITAHIANSTLTVTVP 137 (156)
Q Consensus 123 i~A~~~~GvL~I~~p 137 (156)
+.+.+.+|||+|+++
T Consensus 49 ~Dve~~~gVLti~f~ 63 (123)
T 3oeq_A 49 PDVELSHGVMTLEIP 63 (123)
T ss_dssp CEEEECSSEEEEECT
T ss_pred eEEEccCCEEEEEEC
Confidence 788899999999996
No 61
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=25.33 E-value=2.1e+02 Score=21.29 Aligned_cols=64 Identities=11% Similarity=0.193 Sum_probs=38.6
Q ss_pred EeCCCCCCCeE-EEEeC-CcEEEEEEEEecccccCCccEEEEeeeeeeEEEEEECCCCcccCceEEEEeCCEEEEE
Q 031640 62 DLSGFHKHDVK-VEIED-GRVLCISGEKKIEKEERTDEGHRLEVAVGKFSRRFQLPENAMVDRITAHIANSTLTVT 135 (156)
Q Consensus 62 ~lPG~~~edi~-V~v~~-~~~L~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~~~GvL~I~ 135 (156)
.|||+..+ ++ +.+.. ++.|.+.... ....+.--. .|.+.++++|...-|.+.|... .+|.+.|.
T Consensus 21 ~l~g~~~~-lSGla~~~~~~~L~aV~d~-------~~~I~~ld~-~g~v~~~i~l~g~~D~EGIa~~-~~g~~~vs 86 (255)
T 3qqz_A 21 EIAGITNN-ISSLTWSAQSNTLFSTINK-------PAAIVEMTT-NGDLIRTIPLDFVKDLETIEYI-GDNQFVIS 86 (255)
T ss_dssp ECTTCCSC-EEEEEEETTTTEEEEEEET-------TEEEEEEET-TCCEEEEEECSSCSSEEEEEEC-STTEEEEE
T ss_pred ECCCcccC-cceeEEeCCCCEEEEEECC-------CCeEEEEeC-CCCEEEEEecCCCCChHHeEEe-CCCEEEEE
Confidence 58999875 54 77762 3466654321 222332222 3788999999776788877653 66655443
No 62
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=25.19 E-value=1.5e+02 Score=19.42 Aligned_cols=33 Identities=12% Similarity=0.123 Sum_probs=28.1
Q ss_pred eeeEEEEEECCCC--cccCceEEEEeCCEEEEEEe
Q 031640 105 VGKFSRRFQLPEN--AMVDRITAHIANSTLTVTVP 137 (156)
Q Consensus 105 ~~~f~r~~~LP~~--vd~~~i~A~~~~GvL~I~~p 137 (156)
.....-+|.||.+ +..+.+...++..-|.|.+.
T Consensus 25 ~~eV~v~V~lp~~~~~~~kdv~V~i~~~~l~v~~k 59 (121)
T 3qor_A 25 LSELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLK 59 (121)
T ss_dssp SSEEEEEEECCCSSCCCGGGEEEEEETTEEEEEET
T ss_pred cceEEEEEECCCCCcccccceEEEEEcCEEEEEEc
Confidence 3457778999998 88999999999999999885
No 63
>2hbp_A Cytoskeleton assembly control protein SLA1; SHD1, NPFX(1,2)D, endocytosis, protein binding; NMR {Saccharomyces cerevisiae}
Probab=24.58 E-value=46 Score=20.22 Aligned_cols=35 Identities=17% Similarity=0.368 Sum_probs=27.5
Q ss_pred eEEeCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEE
Q 031640 49 DWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCI 83 (156)
Q Consensus 49 di~e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I 83 (156)
.|.+..+.|.+++.+-|+....|.+.-.+|..+.|
T Consensus 7 tWtDrtG~F~VeA~flg~~dgki~LhK~nGv~I~V 41 (68)
T 2hbp_A 7 LWVDRSGTFKVDAEFIGCAKGKIHLHKANGVKIAV 41 (68)
T ss_dssp EEEBSSSCCEEEEEEEEEETTEEEEECTTSCEEEE
T ss_pred EEEcCCCCeEEEEEEEEEeCCEEEEEecCCcEEEe
Confidence 57778889999999999998888888877633333
No 64
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=24.39 E-value=1.7e+02 Score=19.94 Aligned_cols=31 Identities=39% Similarity=0.451 Sum_probs=20.6
Q ss_pred CceEEEE---eCCEEEEEEeccCCCCCCCCceEEEeee
Q 031640 121 DRITAHI---ANSTLTVTVPKKDIKKHHGHSRSIKITG 155 (156)
Q Consensus 121 ~~i~A~~---~~GvL~I~~pK~~~~~~~~~~~~I~I~~ 155 (156)
-+|+.+| .||+|.|+.--....+ ...|.|..
T Consensus 81 ~~I~Vtf~iD~nGiL~V~a~d~~tg~----~~~i~I~~ 114 (152)
T 3h0x_A 81 PQIEVTFALDANGILKVSATDKGTGK----SESITITN 114 (152)
T ss_dssp SCEEEEEEECTTSEEEEEEEETTTCC----EEEEEEEC
T ss_pred ceEEEEEEEcCCCEEEEEEEEcCCCc----EeEEEEec
Confidence 3466665 7999999986443333 36777763
No 65
>2hyk_A Beta-1,3-glucanase; family 16, beta-jelly roll, bacterial endo-beta-1,3-glucanas hydrolase; 1.30A {Nocardiopsis SP} PDB: 3atg_A
Probab=23.49 E-value=76 Score=23.37 Aligned_cols=47 Identities=13% Similarity=0.290 Sum_probs=25.4
Q ss_pred CCCeEEEEeC-CcEEEEEEEEecccccCCccEEEE---eeeeeeEEEEEECCCC
Q 031640 68 KHDVKVEIED-GRVLCISGEKKIEKEERTDEGHRL---EVAVGKFSRRFQLPEN 117 (156)
Q Consensus 68 ~edi~V~v~~-~~~L~I~g~~~~~~~~~~~~~~~~---e~~~~~f~r~~~LP~~ 117 (156)
++++ .+++ | .|.|++.+.....-...++..+ ...+|.|+-++.||..
T Consensus 49 ~~n~--~v~~~G-~L~I~~~~~~~~~~~S~~i~S~~~f~~~yG~~E~r~klp~g 99 (245)
T 2hyk_A 49 RANS--ALDGNG-NLVITARQEADGGYTSARLTTQNKVQPQYGRVEASIQIPRG 99 (245)
T ss_dssp TTTE--EECSSS-CEEEEEEECTTSCEEECEEECTTTCCCCSEEEEEEEECCCS
T ss_pred ccce--EEecCC-EEEEEEEecCCCCEEEEEEEccCcccccCCeEEEEEEcCCC
Confidence 4454 4444 5 7888887654111111112111 2346888889999964
No 66
>2ayh_A 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolase (glucanase); 1.60A {Hybrid} SCOP: b.29.1.2 PDB: 1byh_A 1glh_A 1u0a_A* 1mac_A 1gbg_A
Probab=22.30 E-value=1.2e+02 Score=21.77 Aligned_cols=43 Identities=12% Similarity=0.081 Sum_probs=22.4
Q ss_pred EEEeC-CcEEEEEEEEecccccCCccEEEE-eeeeeeEEEEEECCC
Q 031640 73 VEIED-GRVLCISGEKKIEKEERTDEGHRL-EVAVGKFSRRFQLPE 116 (156)
Q Consensus 73 V~v~~-~~~L~I~g~~~~~~~~~~~~~~~~-e~~~~~f~r~~~LP~ 116 (156)
|.+++ | .|.|++.+.....-....+..+ ...+|.|+-++.+|.
T Consensus 39 v~v~~~G-~L~i~~~~~~~~~~~s~~i~S~~~f~yG~~E~r~k~p~ 83 (214)
T 2ayh_A 39 VNFTNDG-KLKLGLTSSAYNKFDCAEYRSTNIYGYGLYEVSMKPAK 83 (214)
T ss_dssp EEECTTS-CEEEEEEEEETTEEEEEEEEESSCBCSEEEEEEEECCC
T ss_pred EEEcCCC-EEEEEEecCCCCceeeEEEEECCeEeeEEEEEEEEcCC
Confidence 34455 5 7777776553100001111111 235788888999985
No 67
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=22.23 E-value=1.9e+02 Score=19.74 Aligned_cols=31 Identities=32% Similarity=0.399 Sum_probs=20.5
Q ss_pred CceEEEE---eCCEEEEEEeccCCCCCCCCceEEEeee
Q 031640 121 DRITAHI---ANSTLTVTVPKKDIKKHHGHSRSIKITG 155 (156)
Q Consensus 121 ~~i~A~~---~~GvL~I~~pK~~~~~~~~~~~~I~I~~ 155 (156)
-+|+.+| .||+|.|+.--....+ ...|.|..
T Consensus 81 ~~IeVtf~iD~nGiL~Vsa~d~~tg~----~~~i~I~~ 114 (152)
T 3dob_A 81 PQIEVTFNIDANGILNVSAEDKSTGK----SNRITIQN 114 (152)
T ss_dssp CCEEEEEEECTTCCEEEEEEETTTCC----EEEEEECC
T ss_pred ceEEEEEEeCCCCeEEEEEEEcCCCC----EEEEEEEc
Confidence 3466665 8999999986443333 36777753
No 68
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=22.22 E-value=1.9e+02 Score=19.72 Aligned_cols=46 Identities=24% Similarity=0.387 Sum_probs=26.1
Q ss_pred eeeEEEEEECCCC-cccCceEEEE---eCCEEEEEEeccCCCCCCCCceEEEeee
Q 031640 105 VGKFSRRFQLPEN-AMVDRITAHI---ANSTLTVTVPKKDIKKHHGHSRSIKITG 155 (156)
Q Consensus 105 ~~~f~r~~~LP~~-vd~~~i~A~~---~~GvL~I~~pK~~~~~~~~~~~~I~I~~ 155 (156)
.|.|.-. -+|.. -..-+|+.+| .||+|.|+.--....+ ...|.|..
T Consensus 65 LG~f~l~-gipp~p~G~~~IeVtf~iD~nGiL~Vsa~d~~tg~----~~~i~I~~ 114 (151)
T 3dqg_A 65 LGQFSLV-GIPPAPRGVPQVEVTFDIDANGIVNVSARDRGTGK----EQQIVIQS 114 (151)
T ss_dssp EEEEEEE-CCCCCCTTCSCEEEEEEECTTSEEEEEEEETTTCC----EEEEEEEC
T ss_pred EEEEEEe-CCCCCCCCCcEEEEEEEeccCcEEEEEEEEccCCC----EeEEEEec
Confidence 4566532 14322 2224466665 8999999986433333 36777753
No 69
>3jx8_A Putative lipoprotein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.16A {Parabacteroides distasonis atcc 8503}
Probab=21.88 E-value=81 Score=23.33 Aligned_cols=40 Identities=13% Similarity=0.195 Sum_probs=27.9
Q ss_pred cceEEeCCCeEEEEEEeCCCCCCCeEEEEeCCcEEEEEEEE
Q 031640 47 RIDWHDTPECHVFKADLSGFHKHDVKVEIEDGRVLCISGEK 87 (156)
Q Consensus 47 ~~di~e~~~~y~i~~~lPG~~~edi~V~v~~~~~L~I~g~~ 87 (156)
.+.+...++.+.|+++.+.--.+.|+++++++ .|.|+-+.
T Consensus 33 ~V~l~qgd~~~~V~i~~~~nl~~~i~~~v~~g-~L~I~~~~ 72 (250)
T 3jx8_A 33 DFEYEQSDKAPYLSVTIDENLFDYLVTEVEGG-TLKIYPKS 72 (250)
T ss_dssp EEEEEECSSCCEEEEEEEGGGGGGEEEEEETT-EEEEEECB
T ss_pred EEEEEECCCCceEEEEECccccceEEEEEECC-EEEEEEcC
Confidence 34445543467777777655568899999985 99998654
No 70
>1dyp_A Kappa-carrageenase; hydrolase, kappa-carrageenan double helix degradation; HET: MSE; 1.54A {Pseudoalteromonas carrageenovora} SCOP: b.29.1.2
Probab=21.49 E-value=2.5e+02 Score=20.77 Aligned_cols=20 Identities=10% Similarity=0.342 Sum_probs=14.6
Q ss_pred CCCCeEEEEeCCcEEEEEEEEec
Q 031640 67 HKHDVKVEIEDGRVLCISGEKKI 89 (156)
Q Consensus 67 ~~edi~V~v~~~~~L~I~g~~~~ 89 (156)
.+++ |.+++| .|+|++.+..
T Consensus 44 ~~~n--v~v~~G-~L~I~a~~~~ 63 (271)
T 1dyp_A 44 KNEN--ATVSKG-KLKLTTKRES 63 (271)
T ss_dssp CGGG--EEEETT-EEEEEEEEEE
T ss_pred CCcc--EEEECC-EEEEEEEecc
Confidence 5566 556776 8999998764
No 71
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=20.96 E-value=2e+02 Score=19.39 Aligned_cols=30 Identities=23% Similarity=0.341 Sum_probs=19.4
Q ss_pred CceEEEE---eCCEEEEEEeccCCCCCCCCceEEEee
Q 031640 121 DRITAHI---ANSTLTVTVPKKDIKKHHGHSRSIKIT 154 (156)
Q Consensus 121 ~~i~A~~---~~GvL~I~~pK~~~~~~~~~~~~I~I~ 154 (156)
.+|+..| .||+|.|+.--.... +...|.|.
T Consensus 81 ~~I~V~f~id~nGiL~V~a~d~~tg----~~~~i~i~ 113 (152)
T 2op6_A 81 PQIEVTFEIDVNGILHVSAEDKGTG----NKNKLTIT 113 (152)
T ss_dssp SCEEEEEEECTTSCEEEEEEETTTC----CEEEEEEC
T ss_pred ceEEEEEEECCCcEEEEEEEEecCC----cEEEEEee
Confidence 3566666 899999998633322 33677775
No 72
>2kgs_A Uncharacterized protein RV0899/MT0922; outer membrane protein A, BON DO cell membrane, membrane, transmembrane, membrane protein; NMR {Mycobacterium tuberculosis} PDB: 2ksm_A
Probab=20.73 E-value=72 Score=21.47 Aligned_cols=28 Identities=11% Similarity=0.093 Sum_probs=23.1
Q ss_pred eCCCCCCCeEEEEeCCcEEEEEEEEeccc
Q 031640 63 LSGFHKHDVKVEIEDGRVLCISGEKKIEK 91 (156)
Q Consensus 63 lPG~~~edi~V~v~~~~~L~I~g~~~~~~ 91 (156)
.|.+++-.|.|.+++| .++++|.-....
T Consensus 2 ~~~~~p~~i~V~v~~G-~VTLsG~Vp~~~ 29 (132)
T 2kgs_A 2 ASALSLSLLSISRSGN-TVTLIGDFPDEA 29 (132)
T ss_dssp CCCCCEEEEEEEECSS-EEEEEEEESCHH
T ss_pred CCcccceeEEEEEECC-EEEEEEECCCHH
Confidence 4667777899999986 999999988643
No 73
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens}
Probab=20.31 E-value=2.1e+02 Score=20.33 Aligned_cols=31 Identities=23% Similarity=0.333 Sum_probs=20.5
Q ss_pred CceEEEE---eCCEEEEEEeccCCCCCCCCceEEEeee
Q 031640 121 DRITAHI---ANSTLTVTVPKKDIKKHHGHSRSIKITG 155 (156)
Q Consensus 121 ~~i~A~~---~~GvL~I~~pK~~~~~~~~~~~~I~I~~ 155 (156)
-+|+.+| .||+|.|+.--....+ ...|.|..
T Consensus 101 ~~IeVtf~iD~nGiL~VsA~d~~tg~----~~~i~I~~ 134 (182)
T 3n8e_A 101 PQIEVTFDIDANGIVHVSAKDKGTGR----EQQIVIQS 134 (182)
T ss_dssp SCEEEEEEECTTCCEEEEEEETTTCC----EEEEEESC
T ss_pred eeEEEEEEEecCCEEEEEEEEcCCCC----EeeEEEec
Confidence 3466665 8999999986443333 36777764
No 74
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=20.22 E-value=2.4e+02 Score=20.54 Aligned_cols=46 Identities=22% Similarity=0.346 Sum_probs=26.4
Q ss_pred eeeEEEEEECCCC-cccCceEEEE---eCCEEEEEEeccCCCCCCCCceEEEeee
Q 031640 105 VGKFSRRFQLPEN-AMVDRITAHI---ANSTLTVTVPKKDIKKHHGHSRSIKITG 155 (156)
Q Consensus 105 ~~~f~r~~~LP~~-vd~~~i~A~~---~~GvL~I~~pK~~~~~~~~~~~~I~I~~ 155 (156)
.|.|.-+ -+|.. -..-.|..+| .||+|.|+.--....+ ...|.|++
T Consensus 66 Lg~f~l~-gipp~p~G~~~IeVtf~iD~nGiL~V~a~d~~tg~----~~~i~I~~ 115 (219)
T 4e81_A 66 LGQFNLD-GINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGK----EQKITIKA 115 (219)
T ss_dssp EEEEEEE-CCCCCSTTCSCEEEEEEECTTCCEEEEEEETTTCC----EEEEEECT
T ss_pred EEEEEEe-CCCCCCCCCceEEEEEEeCCCCCEeeeeeccccCc----cceEeeec
Confidence 4566532 14422 2223566665 7999999986443333 37777753
Done!