Query 031652
Match_columns 155
No_of_seqs 121 out of 1136
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 04:59:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031652.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031652hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpr_A Ubiquitin-conjugating e 100.0 5.7E-47 1.9E-51 273.7 19.0 142 2-146 3-149 (151)
2 1ayz_A UBC2, ubiquitin-conjuga 100.0 6.8E-47 2.3E-51 277.7 17.7 145 1-148 1-151 (169)
3 2c2v_B Ubiquitin-conjugating e 100.0 3.6E-47 1.2E-51 275.5 15.5 142 3-147 5-151 (154)
4 2aak_A UBC1, ubiquitin conjuga 100.0 1.3E-46 4.4E-51 272.1 18.2 143 1-148 1-144 (152)
5 2ayv_A Ubiquitin-conjugating e 100.0 1.8E-46 6.3E-51 274.6 18.6 140 3-145 21-165 (166)
6 2bep_A Ubiquitin-conjugating e 100.0 2.1E-46 7.2E-51 272.8 18.2 145 1-147 5-158 (159)
7 2ucz_A UBC7, ubiquitin conjuga 100.0 9.9E-47 3.4E-51 276.0 16.2 146 1-151 1-161 (165)
8 1fxt_A Ubiquitin-conjugating e 100.0 7.8E-47 2.7E-51 272.4 15.1 142 4-147 2-149 (149)
9 1zdn_A Ubiquitin-conjugating e 100.0 1.4E-46 4.8E-51 273.5 16.5 140 3-145 13-157 (158)
10 1z2u_A Ubiquitin-conjugating e 100.0 2.8E-46 9.4E-51 269.8 17.9 141 3-146 4-149 (150)
11 2c4o_A Ubiquitin-conjugating e 100.0 3.5E-46 1.2E-50 273.0 18.6 141 3-146 19-164 (165)
12 1yrv_A Ubiquitin-conjugating l 100.0 6.1E-47 2.1E-51 277.8 14.6 145 1-150 20-167 (169)
13 2r0j_A Ubiquitin carrier prote 100.0 1.7E-46 6E-51 270.6 16.4 141 4-147 2-147 (149)
14 3h8k_A Ubiquitin-conjugating e 100.0 2.8E-46 9.7E-51 273.4 17.1 146 2-152 2-161 (164)
15 1jat_A Ubiquitin-conjugating e 100.0 2.4E-46 8.1E-51 271.5 15.8 143 2-147 4-151 (155)
16 1i7k_A Ubiquitin-conjugating e 100.0 2.2E-46 7.5E-51 277.0 15.3 145 3-153 30-174 (179)
17 3rz3_A Ubiquitin-conjugating e 100.0 2.7E-46 9.3E-51 277.7 15.4 149 2-153 6-172 (183)
18 3bzh_A Ubiquitin-conjugating e 100.0 1.2E-45 4E-50 276.2 18.3 143 1-146 46-193 (194)
19 1yh2_A HSPC150 protein similar 100.0 2E-45 6.7E-50 270.0 18.9 142 3-147 4-154 (169)
20 2f4z_A Tgtwinscan_2721 - E2 do 100.0 9.7E-46 3.3E-50 276.4 17.3 145 3-147 32-192 (193)
21 3k9o_A Ubiquitin-conjugating e 100.0 1E-45 3.4E-50 278.4 17.4 148 1-148 2-156 (201)
22 2e2c_A Ubiquitin conjugating e 100.0 1.1E-45 3.7E-50 268.2 16.3 140 3-145 9-152 (156)
23 2pwq_A Ubiquitin conjugating e 100.0 7.7E-46 2.6E-50 281.1 16.0 144 2-147 22-170 (216)
24 2gjd_A Ubiquitin-conjugating e 100.0 1.8E-45 6.2E-50 267.3 17.1 143 1-146 1-156 (157)
25 3rcz_B SUMO-conjugating enzyme 100.0 2.5E-45 8.7E-50 267.9 17.3 141 3-146 10-162 (163)
26 2grr_A Ubiquitin-conjugating e 100.0 4.6E-45 1.6E-49 266.2 16.8 144 1-147 4-160 (161)
27 2awf_A Ubiquitin-conjugating e 100.0 3.5E-45 1.2E-49 269.3 15.1 141 3-148 17-172 (172)
28 1y8x_A Ubiquitin-conjugating e 100.0 4.5E-45 1.5E-49 265.9 14.8 144 1-152 4-148 (160)
29 2y9m_A Ubiquitin-conjugating e 100.0 1.2E-44 4.2E-49 266.4 16.7 148 1-150 3-164 (172)
30 3e46_A Ubiquitin-conjugating e 100.0 1.8E-44 6.1E-49 279.1 18.2 146 3-148 57-208 (253)
31 1wzv_A Ubiquitin-conjugating e 100.0 1.5E-44 5.1E-49 262.0 16.4 141 3-147 4-151 (155)
32 3fn1_B NEDD8-conjugating enzym 100.0 3.8E-44 1.3E-48 262.8 17.1 142 1-146 12-166 (167)
33 1tte_A Ubiquitin-conjugating e 100.0 7.3E-45 2.5E-49 275.6 12.1 145 2-148 1-151 (215)
34 2nvu_C NEDD8-conjugating enzym 100.0 3E-44 1E-48 265.9 14.4 143 2-152 25-168 (180)
35 2onu_A Ubiquitin-conjugating e 100.0 1.2E-44 4.1E-49 261.7 10.5 141 2-147 1-147 (152)
36 3o2u_A NEDD8-conjugating enzym 100.0 4E-43 1.4E-47 261.9 14.4 144 1-152 27-177 (190)
37 2z5d_A Ubiquitin-conjugating e 100.0 2.1E-43 7.2E-48 260.8 11.8 139 3-147 25-169 (179)
38 1c4z_D UBCH7, ubiquitin conjug 100.0 2.7E-43 9.4E-48 255.1 12.2 142 3-148 2-150 (154)
39 4ddg_A Ubiquitin-conjugating e 100.0 5.5E-42 1.9E-46 281.0 18.1 143 2-147 2-149 (399)
40 2fo3_A Ubiquitin-conjugating e 100.0 3.5E-42 1.2E-46 241.4 14.1 118 1-121 4-122 (125)
41 1yf9_A Ubiquitin carrier prote 100.0 2.2E-42 7.4E-47 254.1 12.1 138 4-147 13-156 (171)
42 2a4d_A Ubiquitin-conjugating e 100.0 2.9E-41 1E-45 245.3 15.2 126 3-130 25-157 (160)
43 4ds2_A Ubiquitin-conjugating e 100.0 1.1E-41 3.7E-46 249.7 12.5 144 1-147 5-164 (167)
44 2h2y_A Ubiquitin-conjugating e 100.0 6.6E-41 2.2E-45 238.0 15.6 117 1-120 18-135 (136)
45 1jat_B Ubiquitin-conjugating e 100.0 7.5E-42 2.6E-46 243.4 9.4 128 1-131 2-137 (138)
46 2q0v_A Ubiquitin-conjugating e 100.0 5.4E-41 1.8E-45 243.3 12.5 126 3-132 21-153 (156)
47 2hlw_A Ubiquitin-conjugating e 100.0 1.3E-40 4.5E-45 244.2 11.9 126 3-130 35-167 (170)
48 2a7l_A Hypothetical ubiquitin- 100.0 6.1E-40 2.1E-44 232.8 11.6 113 1-116 20-136 (136)
49 3ceg_A Baculoviral IAP repeat- 100.0 6.1E-38 2.1E-42 249.0 15.9 141 3-146 76-242 (323)
50 2f4w_A Ubiquitin-conjugating e 100.0 1.7E-36 5.9E-41 225.5 16.1 115 3-122 14-131 (187)
51 1zuo_A Hypothetical protein LO 100.0 1E-36 3.6E-41 226.5 7.8 118 3-121 27-159 (186)
52 2z6o_A UFM1-conjugating enzyme 99.9 6.3E-28 2.2E-32 173.6 2.0 96 5-109 34-144 (172)
53 3r3q_A Suppressor protein STP2 99.8 2.5E-19 8.7E-24 129.6 9.8 115 6-122 31-161 (162)
54 3kpa_A Probable ubiquitin fold 99.7 5.2E-19 1.8E-23 124.7 3.3 92 5-108 36-145 (168)
55 3obq_A Tumor susceptibility ge 99.5 9.7E-14 3.3E-18 98.7 6.8 103 7-117 24-138 (146)
56 2ebm_A RWD domain-containing p 96.9 0.0085 2.9E-07 40.7 8.7 68 4-75 11-78 (128)
57 2yz0_A Serine/threonine-protei 96.2 0.04 1.4E-06 37.8 9.0 67 6-75 13-85 (138)
58 3zqs_A E3 ubiquitin-protein li 95.8 0.12 4.2E-06 37.6 10.3 84 7-117 5-88 (186)
59 2day_A Ring finger protein 25; 95.8 0.1 3.5E-06 35.2 9.1 68 6-75 11-82 (128)
60 1ukx_A GCN2, GCN2 EIF2alpha ki 94.7 0.27 9.3E-06 33.4 8.7 68 5-75 12-86 (137)
61 2ebk_A RWD domain-containing p 93.6 0.14 4.9E-06 34.5 5.4 67 7-74 11-78 (128)
62 2daw_A RWD domain containing p 91.3 0.34 1.1E-05 33.9 5.0 23 53-75 76-98 (154)
63 2dax_A Protein C21ORF6; RWD do 90.2 0.18 6.2E-06 35.1 2.7 24 52-75 73-96 (152)
64 3rls_A YAF9, protein AF-9 homo 54.5 39 0.0013 24.1 6.2 43 32-76 30-72 (175)
65 3qrl_A Transcription initiatio 46.5 56 0.0019 22.4 5.7 43 34-78 32-77 (140)
66 3u3c_B Paxillin LD2 peptide; 4 40.6 23 0.0008 16.5 2.1 20 4-25 6-25 (26)
67 2kmf_A Photosystem II 11 kDa p 36.3 46 0.0016 22.0 3.9 47 103-152 19-66 (115)
68 2bum_A Protocatechuate 3,4-dio 33.2 42 0.0014 24.5 3.6 25 50-74 109-138 (209)
69 3g9r_A Fusion complex of HIV-1 32.8 24 0.00081 18.7 1.6 16 1-16 26-41 (42)
70 2y6x_A PSB27, photosystem II 1 31.8 58 0.002 21.4 3.8 42 104-148 16-57 (113)
No 1
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=5.7e-47 Score=273.67 Aligned_cols=142 Identities=39% Similarity=0.725 Sum_probs=133.1
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCCeEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEecccccCC
Q 031652 2 QASRARLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPN 81 (155)
Q Consensus 2 ~~a~~RL~~E~~~l~~~~~~~~~i~~~~~~~n~~~w~v~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPn 81 (155)
++|.+||++|++++++++ +.||++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 3 ~~a~~RL~kEl~~l~~~~--~~~i~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 80 (151)
T 4gpr_A 3 AMAMRRIQKELREIQQDP--PCNCSAGPVGDDIFHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVYHPN 80 (151)
T ss_dssp HHHHHHHHHHHHHHHHSC--CTTEEEEESSSCTTEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTT
T ss_pred hHHHHHHHHHHHHHHhCC--CCCEEEEEcCCCceEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCcccce
Confidence 478999999999999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCeEEccCCCCCCCCcCCHHHHHHHHHHHhcCCCCCCCcchhhhhhHH-----HHHHHHHHHHHhc
Q 031652 82 VHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGMWTL-----FWYRLVEFISRYY 146 (155)
Q Consensus 82 i~~~~G~icl~~l~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~e~a~~~~-----~~~~~~~~~~k~~ 146 (155)
|+ .+|.||+++|.++|+|+++|++||.+|+++|.+||+++|+|.|||+++. |.+.++++.+++|
T Consensus 81 v~-~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~d~~~f~~~ar~~~~~ya 149 (151)
T 4gpr_A 81 IN-KNGVICLDILKDQWSPALTLSRVLLSISSLLTDPNPSDPLDPEVANVLRANKKQFEDTAREWTRMYA 149 (151)
T ss_dssp BC-TTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHCCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred EC-CCCEEEcccccCCCCCCCcHHHHHHHHHHHhcCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHhc
Confidence 96 8999999999999999999999999999999999999999999998543 6666666666665
No 2
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=6.8e-47 Score=277.66 Aligned_cols=145 Identities=37% Similarity=0.791 Sum_probs=134.0
Q ss_pred Ch-HHHHHHHHHHHHHHhcCCCCCCeEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeccccc
Q 031652 1 MQ-ASRARLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFH 79 (155)
Q Consensus 1 m~-~a~~RL~~E~~~l~~~~~~~~~i~~~~~~~n~~~w~v~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~H 79 (155)
|+ .|.+||++|++++++.+ ++||++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 1 Ms~~a~~RL~kEl~~l~~~~--~~gi~~~p~~~nl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~H 78 (169)
T 1ayz_A 1 MSTPARRRLMRDFKRMKEDA--PPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFH 78 (169)
T ss_dssp -CCHHHHHHHHHHHHHHHSC--CTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCC
T ss_pred CChHHHHHHHHHHHHHHhCC--CCCEEEEecCCccccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccccCCcc
Confidence 77 68899999999999999 8999999989999999999999999999999999999999999999999999999999
Q ss_pred CCccCCCCeEEccCCCCCCCCcCCHHHHHHHHHHHhcCCCCCCCcchhhhhhHH-----HHHHHHHHHHHhccc
Q 031652 80 PNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGMWTL-----FWYRLVEFISRYYPS 148 (155)
Q Consensus 80 Pni~~~~G~icl~~l~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~e~a~~~~-----~~~~~~~~~~k~~~~ 148 (155)
|||+ .+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||+++. |.+.+++++++++..
T Consensus 79 PNI~-~~G~ICl~iL~~~WsP~~~i~~vL~si~~ll~~Pn~~~P~n~~aa~~~~~d~~~y~~~~r~~~~~~a~~ 151 (169)
T 1ayz_A 79 PNVY-ANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKETVEKSWED 151 (169)
T ss_dssp TTBC-TTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred CCCC-CCCeEeehhhccCCCCcCcHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHCHHHHHHHHHHHHHHHcCC
Confidence 9996 7999999999999999999999999999999999999999999998543 666677777766654
No 3
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=3.6e-47 Score=275.48 Aligned_cols=142 Identities=40% Similarity=0.703 Sum_probs=130.4
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCeEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEecccccCCc
Q 031652 3 ASRARLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNV 82 (155)
Q Consensus 3 ~a~~RL~~E~~~l~~~~~~~~~i~~~~~~~n~~~w~v~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPni 82 (155)
.|.+||++|++++++++ ++||++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 5 ~~~~RL~kEl~~l~~~~--~~~i~~~~~~~~l~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 82 (154)
T 2c2v_B 5 GLPRRIIKETQRLLAEP--VPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNV 82 (154)
T ss_dssp SCCHHHHHHHHHHHHSC--CTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTB
T ss_pred HHHHHHHHHHHHHHhCC--CCCEEEEECCCchheEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCcccCcC
Confidence 46799999999999998 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCeEEccCCCCCCCCcCCHHHHHHHHHHHhcCCCCCCCcchhhhhhHH-----HHHHHHHHHHHhcc
Q 031652 83 HFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGMWTL-----FWYRLVEFISRYYP 147 (155)
Q Consensus 83 ~~~~G~icl~~l~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~e~a~~~~-----~~~~~~~~~~k~~~ 147 (155)
+ .+|.||+++|.++|+|+++|++||.+|+++|.+|++++|+|.+||+++. |.+.++++.++++.
T Consensus 83 ~-~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~pn~~~p~n~~aa~~~~~d~~~f~~~ar~~~~~~a~ 151 (154)
T 2c2v_B 83 D-KLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYAM 151 (154)
T ss_dssp C-TTCBBCCHHHHTSCCTTCCHHHHHHHHHHHTTSCCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred c-cCCeEEchhccCCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 6 8899999999999999999999999999999999999999999998543 66677777777664
No 4
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=1.3e-46 Score=272.08 Aligned_cols=143 Identities=37% Similarity=0.773 Sum_probs=130.6
Q ss_pred Ch-HHHHHHHHHHHHHHhcCCCCCCeEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeccccc
Q 031652 1 MQ-ASRARLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFH 79 (155)
Q Consensus 1 m~-~a~~RL~~E~~~l~~~~~~~~~i~~~~~~~n~~~w~v~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~H 79 (155)
|+ .|.+||++|++++++++ ++||++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 1 Ms~~a~~RL~~E~~~l~~~~--~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 78 (152)
T 2aak_A 1 MSTPARKRLMRDFKRLQQDP--PAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFH 78 (152)
T ss_dssp CCCHHHHHHHHHHHHHHHSC--CTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCC
T ss_pred CChHHHHHHHHHHHHHHhCC--CCCEEEEeCCCCccEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEecCccc
Confidence 77 68899999999999999 8999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccCCCCeEEccCCCCCCCCcCCHHHHHHHHHHHhcCCCCCCCcchhhhhhHHHHHHHHHHHHHhccc
Q 031652 80 PNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGMWTLFWYRLVEFISRYYPS 148 (155)
Q Consensus 80 Pni~~~~G~icl~~l~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~e~a~~~~~~~~~~~~~~k~~~~ 148 (155)
|||+ .+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||+++ .++.++|.++++..
T Consensus 79 Pnv~-~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~--~~~~~~y~~~~~~~ 144 (152)
T 2aak_A 79 PNIY-ADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMY--SESKREYNRRVRDV 144 (152)
T ss_dssp TTBC-TTSBBCCGGGTTSCCTTCCHHHHHHHHHHHHTSCCTTSCSSHHHHHHH--HHCHHHHHHHHHHH
T ss_pred CCCC-CCCEEechhhcCCCCCCCcHHHHHHHHHHHHhCCCCCccccHHHHHHH--HHCHHHHHHHHHHH
Confidence 9997 799999999999999999999999999999999999999999999843 44444444444443
No 5
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=1.8e-46 Score=274.64 Aligned_cols=140 Identities=37% Similarity=0.743 Sum_probs=129.5
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCeEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEecccccCCc
Q 031652 3 ASRARLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNV 82 (155)
Q Consensus 3 ~a~~RL~~E~~~l~~~~~~~~~i~~~~~~~n~~~w~v~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPni 82 (155)
.|.+||++|++++++++ ++||++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 21 ~~~~RL~kEl~~l~~~~--~~gi~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI 98 (166)
T 2ayv_A 21 GALKRINKELNDLSKDP--PTNCSAGPVGDDMFHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKIYHPNI 98 (166)
T ss_dssp THHHHHHHHHHHHHHSC--CTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTB
T ss_pred HHHHHHHHHHHHHHhCC--CCCEEEEEcCCCcceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCCcCCcC
Confidence 57899999999999998 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCeEEccCCCCCCCCcCCHHHHHHHHHHHhcCCCCCCCcchhhhhhHH-----HHHHHHHHHHHh
Q 031652 83 HFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGMWTL-----FWYRLVEFISRY 145 (155)
Q Consensus 83 ~~~~G~icl~~l~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~e~a~~~~-----~~~~~~~~~~k~ 145 (155)
+ .+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||+++. |.+.++++++++
T Consensus 99 ~-~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~pn~~~Pln~~aa~l~~~d~~~f~~~ar~~~~~~ 165 (166)
T 2ayv_A 99 N-SQGAICLDILKDQWSPALTISKVLLSISSLLTDPNPDDPLVPEIAHLYKSDRMRYDQTAREWSQKY 165 (166)
T ss_dssp C-TTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred C-CCCeEEcccccccCCCCCcHHHHHHHHHHHHhCCCCCchhhHHHHHHHHHCHHHHHHHHHHHHHHh
Confidence 6 8999999999999999999999999999999999999999999998443 555555555554
No 6
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00 E-value=2.1e-46 Score=272.78 Aligned_cols=145 Identities=40% Similarity=0.681 Sum_probs=133.1
Q ss_pred Ch-HHHHHHHHHHHHHHhc---CCCCCCeEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEecc
Q 031652 1 MQ-ASRARLFKEYKEVQRE---KSADPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTK 76 (155)
Q Consensus 1 m~-~a~~RL~~E~~~l~~~---~~~~~~i~~~~~~~n~~~w~v~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~ 76 (155)
|+ .|.+||++|++++++. + +.||++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+
T Consensus 5 Ms~~a~~RL~kEl~~l~~~~~~~--~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 82 (159)
T 2bep_A 5 MANIAVQRIKREFKEVLKSEETS--KNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITK 82 (159)
T ss_dssp CCHHHHHHHHHHHHHHHHCHHHH--TTSEEEEECSSSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSC
T ss_pred chHHHHHHHHHHHHHHHhcCCCC--CCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeCC
Confidence 55 5789999999999985 4 7799999989999999999999999999999999999999999999999999999
Q ss_pred cccCCccCCCCeEEccCCCCCCCCcCCHHHHHHHHHHHhcCCCCCCCcchhhhhhHH-----HHHHHHHHHHHhcc
Q 031652 77 IFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGMWTL-----FWYRLVEFISRYYP 147 (155)
Q Consensus 77 i~HPni~~~~G~icl~~l~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~e~a~~~~-----~~~~~~~~~~k~~~ 147 (155)
+|||||+..+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||+++. |.+.++++.++++.
T Consensus 83 i~HPni~~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~ 158 (159)
T 2bep_A 83 IWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAG 158 (159)
T ss_dssp CCBTTBCTTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSC
T ss_pred CCccCCCCCCCEEeChhhhccCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhhc
Confidence 999999756899999999999999999999999999999999999999999998543 66777777777664
No 7
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=9.9e-47 Score=276.02 Aligned_cols=146 Identities=33% Similarity=0.709 Sum_probs=131.8
Q ss_pred Ch-HHHHHHHHHHHHHHhcCCCCCCeEEEecC-CCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEecccc
Q 031652 1 MQ-ASRARLFKEYKEVQREKSADPDIQLVCDD-SNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIF 78 (155)
Q Consensus 1 m~-~a~~RL~~E~~~l~~~~~~~~~i~~~~~~-~n~~~w~v~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~ 78 (155)
|+ .|.+||++|++++++.+ ++||++.+.+ +|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++|
T Consensus 1 M~~~a~~RL~kEl~~l~~~~--~~gi~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 78 (165)
T 2ucz_A 1 MSKTAQKRLLKELQQLIKDS--PPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSIL 78 (165)
T ss_dssp -CHHHHHHHHHHHHHHHHSC--CTTEEEEESSSSCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCS
T ss_pred CChHHHHHHHHHHHHHHhCC--CCCEEEEECCCCCccEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeCCCc
Confidence 66 67899999999999998 9999999765 79999999999999999999999999999999999999999999999
Q ss_pred cCCccCCCCeEEccCC-------------CCCCCCcCCHHHHHHHHHHHhcCCCCCCCcchhhhhhHHHHHHHHHHHHHh
Q 031652 79 HPNVHFKTGEICLDIL-------------KNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGMWTLFWYRLVEFISRY 145 (155)
Q Consensus 79 HPni~~~~G~icl~~l-------------~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~e~a~~~~~~~~~~~~~~k~ 145 (155)
||||+ .+|.||+++| .++|+|+++|++||.+|+++|.+|++++|+|.+||+ +|.++.++|.+++
T Consensus 79 HPNv~-~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~--~~~~~~~~y~~~v 155 (165)
T 2ucz_A 79 HPNIY-PNGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLSEPNIESGANIDACI--LWRDNRPEFERQV 155 (165)
T ss_dssp CTTBC-TTSBBCCGGGSCCCSCTTSTTTTTTSCCTTCCHHHHHHHHHHHHHSCCGGGCCCHHHHH--HHHTTHHHHHHHH
T ss_pred cCCCC-CCCcEeehhhCCccccccccCCCCCCCCCcCcHHHHHHHHHHHHhCCCCCCchhHHHHH--HHHHCHHHHHHHH
Confidence 99996 7999999999 589999999999999999999999999999999998 4455666666666
Q ss_pred cccccc
Q 031652 146 YPSVIM 151 (155)
Q Consensus 146 ~~~v~~ 151 (155)
+.++..
T Consensus 156 ~~~~~~ 161 (165)
T 2ucz_A 156 KLSILK 161 (165)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 655543
No 8
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00 E-value=7.8e-47 Score=272.42 Aligned_cols=142 Identities=38% Similarity=0.689 Sum_probs=132.9
Q ss_pred HHHHHHHHHHHHHhcCCCCCCeEEEecCC-CcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEecccccCCc
Q 031652 4 SRARLFKEYKEVQREKSADPDIQLVCDDS-NIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNV 82 (155)
Q Consensus 4 a~~RL~~E~~~l~~~~~~~~~i~~~~~~~-n~~~w~v~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPni 82 (155)
|.+||++|++++++++ ++||++.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 2 ~~~RL~~El~~l~~~~--~~~i~~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni 79 (149)
T 1fxt_A 2 RAKRIMKEIQAVKDDP--AAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNI 79 (149)
T ss_dssp CHHHHHHHHHHHHHCG--GGCCEEEESSSSCSSEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred hHHHHHHHHHHHHhCC--CCCEEEEECCCCCceEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCccCCC
Confidence 6799999999999998 89999998877 99999999999999999999999999999999999999999999999999
Q ss_pred cCCCCeEEccCCCCCCCCcCCHHHHHHHHHHHhcCCCCCCCcchhhhhhHH-----HHHHHHHHHHHhcc
Q 031652 83 HFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGMWTL-----FWYRLVEFISRYYP 147 (155)
Q Consensus 83 ~~~~G~icl~~l~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~e~a~~~~-----~~~~~~~~~~k~~~ 147 (155)
+..+|.||+++|.++|+|+++|++||.+|+++|.+|++++|+|.+||+++. |.+.++++.+++|.
T Consensus 80 ~~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~d~~~f~~~a~~~~~~~a~ 149 (149)
T 1fxt_A 80 SSVTGAICLDILKNAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYAS 149 (149)
T ss_dssp CSSSCCBCCHHHHTSCCTTCCHHHHHHHHHHHHHSCCSSSCSSHHHHHHHHHCSSHHHHHHHHHHHHHCC
T ss_pred cCCCCeEeCCcCCCCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 744999999999999999999999999999999999999999999998654 77888888887763
No 9
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.4e-46 Score=273.46 Aligned_cols=140 Identities=31% Similarity=0.616 Sum_probs=129.4
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCeEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEecccccCCc
Q 031652 3 ASRARLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNV 82 (155)
Q Consensus 3 ~a~~RL~~E~~~l~~~~~~~~~i~~~~~~~n~~~w~v~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPni 82 (155)
.|.+||++|++++++++ ++||++.+.++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 13 ~~~~RL~kEl~~l~~~~--~~gi~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 90 (158)
T 1zdn_A 13 HIIRLVYKEVTTLTADP--PDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNV 90 (158)
T ss_dssp HHHHHHHHHHHHHHHSC--CTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTB
T ss_pred HHHHHHHHHHHHHHhCC--CCCEEEEECCCChhheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEeccCcccCCC
Confidence 56799999999999999 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCeEEccCCCCCCCCcCCHHHHHHHHHHHhcCCCCCCCcchhhhhhHH-----HHHHHHHHHHHh
Q 031652 83 HFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGMWTL-----FWYRLVEFISRY 145 (155)
Q Consensus 83 ~~~~G~icl~~l~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~e~a~~~~-----~~~~~~~~~~k~ 145 (155)
+ .+|.||+++|.++|+|+++|++||.+|+++|.+|++++|+|.+||+++. |.+.++++.+++
T Consensus 91 ~-~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~pn~~~p~n~~aa~~~~~d~~~f~~~a~~~t~~~ 157 (158)
T 1zdn_A 91 G-ANGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTEIH 157 (158)
T ss_dssp C-TTSBBCHHHHTTTCCTTCCHHHHHHHHHHHHHSCCGGGCSSHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred C-CCCEEehhhcCCCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHh
Confidence 6 7899999999999999999999999999999999999999999998543 555555555554
No 10
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=2.8e-46 Score=269.81 Aligned_cols=141 Identities=37% Similarity=0.734 Sum_probs=130.3
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCeEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEecccccCCc
Q 031652 3 ASRARLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNV 82 (155)
Q Consensus 3 ~a~~RL~~E~~~l~~~~~~~~~i~~~~~~~n~~~w~v~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPni 82 (155)
+|.+||++|++++++++ ++||++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 4 ~~~~RL~kEl~~l~~~~--~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 81 (150)
T 1z2u_A 4 MALKRIQKELQDLGRDP--PAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNI 81 (150)
T ss_dssp HHHHHHHHHHHHHHHSC--CSSEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred HHHHHHHHHHHHHHhCC--CCCEEEEECCCcceEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCcccCcC
Confidence 57899999999999998 8999999988999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCeEEccCCCCCCCCcCCHHHHHHHHHHHhcCCCCCCCcchhhhhhHH-----HHHHHHHHHHHhc
Q 031652 83 HFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGMWTL-----FWYRLVEFISRYY 146 (155)
Q Consensus 83 ~~~~G~icl~~l~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~e~a~~~~-----~~~~~~~~~~k~~ 146 (155)
+ .+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||+++. |.+.++++.+++|
T Consensus 82 ~-~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~pn~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a 149 (150)
T 1z2u_A 82 N-SNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRERYNQLAREWTQKYA 149 (150)
T ss_dssp C-TTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred C-CCCeEeeccccCCCCCCCCHHHHHHHHHHHhhCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6 7999999999999999999999999999999999999999999998442 5555555555554
No 11
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=3.5e-46 Score=272.97 Aligned_cols=141 Identities=36% Similarity=0.738 Sum_probs=130.5
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCeEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEecccccCCc
Q 031652 3 ASRARLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNV 82 (155)
Q Consensus 3 ~a~~RL~~E~~~l~~~~~~~~~i~~~~~~~n~~~w~v~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPni 82 (155)
.|.+||++|++++++++ ++||++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 19 ~~~~RL~kEl~~l~~~~--~~gi~~~p~~~nl~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i~HPnV 96 (165)
T 2c4o_A 19 MALKRIHKELNDLARDP--PAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNI 96 (165)
T ss_dssp HHHHHHHHHHHHHHSSC--CTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTB
T ss_pred HHHHHHHHHHHHHHhCC--CCCEEEEEcCCCcceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecCCcCCcC
Confidence 57899999999999998 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCeEEccCCCCCCCCcCCHHHHHHHHHHHhcCCCCCCCcchhhhhhHH-----HHHHHHHHHHHhc
Q 031652 83 HFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGMWTL-----FWYRLVEFISRYY 146 (155)
Q Consensus 83 ~~~~G~icl~~l~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~e~a~~~~-----~~~~~~~~~~k~~ 146 (155)
+ .+|.||+++|.++|+|+++|++||.+|+++|.+|++++|+|.+||+++. |.+.++++.+++|
T Consensus 97 ~-~~G~ICl~iL~~~W~P~~ti~~vL~si~~ll~~pn~~~P~n~~aa~~~~~d~~~y~~~ar~~~~~~a 164 (165)
T 2c4o_A 97 N-SNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYA 164 (165)
T ss_dssp C-TTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHTT
T ss_pred C-CCCeEeehhhcCCCCCcCcHHHHHHHHHHHHhCCCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6 7999999999999999999999999999999999999999999998543 5555555555554
No 12
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=6.1e-47 Score=277.83 Aligned_cols=145 Identities=24% Similarity=0.488 Sum_probs=136.7
Q ss_pred Ch-HHHHHHHHHHHHHHhcCCCCCCeEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeccccc
Q 031652 1 MQ-ASRARLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFH 79 (155)
Q Consensus 1 m~-~a~~RL~~E~~~l~~~~~~~~~i~~~~~~~n~~~w~v~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~H 79 (155)
|+ .|.+||++|+++|++++ ++||++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 20 M~~~a~~RL~kEl~~l~~~~--~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~H 97 (169)
T 1yrv_A 20 MHGRAYLLLHRDFCDLKENN--YKGITAKPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIPFH 97 (169)
T ss_dssp GGCHHHHHHHHHHHHHHHHC--CTTEEEEECSTTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESSCCCC
T ss_pred cChHHHHHHHHHHHHHHhCC--CCCEEEEEcCCccccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecCCCcc
Confidence 55 57899999999999999 8999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccCCCCeEEccCCC--CCCCCcCCHHHHHHHHHHHhcCCCCCCCcchhhhhhHHHHHHHHHHHHHhccccc
Q 031652 80 PNVHFKTGEICLDILK--NAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGMWTLFWYRLVEFISRYYPSVI 150 (155)
Q Consensus 80 Pni~~~~G~icl~~l~--~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~e~a~~~~~~~~~~~~~~k~~~~v~ 150 (155)
|||++.+|.||+++|. ++|+|+++|++||.+|+++|.+|++++|+|.|||+ +|.++.++|.++ +++|.
T Consensus 98 PNI~~~~G~ICL~iL~~~~~WsP~~ti~~vL~sI~sll~~Pn~~~Pln~eaa~--l~~~d~~~y~~~-~~~v~ 167 (169)
T 1yrv_A 98 PNVDPHTGQPCIDFLDNPEKWNTNYTLSSILLALQVMLSNPVLENPVNLEAAR--ILVKDESLYRTI-LRLFN 167 (169)
T ss_dssp TTBCTTTCCBCCHHHHCGGGCCTTCCHHHHHHHHHHHHTSCCTTSCSCHHHHH--HHHSCHHHHHHH-HHHHC
T ss_pred CcccCCCCeEeehhhcCCcCCCCcCCHHHHHHHHHHHHhCCCCCCchhHHHHH--HHHHCHHHHHHH-HHHhh
Confidence 9996699999999998 89999999999999999999999999999999999 667888899888 77664
No 13
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00 E-value=1.7e-46 Score=270.57 Aligned_cols=141 Identities=43% Similarity=0.735 Sum_probs=131.0
Q ss_pred HHHHHHHHHHHHHhcCCCCCCeEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEecccccCCcc
Q 031652 4 SRARLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVH 83 (155)
Q Consensus 4 a~~RL~~E~~~l~~~~~~~~~i~~~~~~~n~~~w~v~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPni~ 83 (155)
+.+||++|++++++++ ++||++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 2 ~~~RL~kEl~~l~~~~--~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~ 79 (149)
T 2r0j_A 2 IPRRITKETQNLANEP--PPGIMAVPVPENYRHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYHPNID 79 (149)
T ss_dssp CCHHHHHHHHHHHHSC--CTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCBTTBC
T ss_pred HHHHHHHHHHHHHhCC--CCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCccCCCC
Confidence 4689999999999998 99999999899999999999999999999999999999999999999999999999999996
Q ss_pred CCCCeEEccCCCCCCCCcCCHHHHHHHHHHHhcCCCCCCCcchhhhhhHH-----HHHHHHHHHHHhcc
Q 031652 84 FKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGMWTL-----FWYRLVEFISRYYP 147 (155)
Q Consensus 84 ~~~G~icl~~l~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~e~a~~~~-----~~~~~~~~~~k~~~ 147 (155)
.+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||+++. |.+.+++++++++.
T Consensus 80 -~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 147 (149)
T 2r0j_A 80 -KLGRICLDILKDKWSPALQIRTVLLSIQALLSSPEPDDPLDSKVAEHFKQDKNDAEHVARQWNKIYAN 147 (149)
T ss_dssp -TTCBBCCGGGTTTCCTTSCHHHHHHHHHHHHHSCCTTSCSSCHHHHHHHHCHHHHHHHHHHHHHHHSC
T ss_pred -CCCEEechhcCCCCCCCCcHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHHcc
Confidence 7899999999999999999999999999999999999999999998543 66666666666653
No 14
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=2.8e-46 Score=273.35 Aligned_cols=146 Identities=31% Similarity=0.608 Sum_probs=132.7
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCCeEEEecCC-CcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEecccccC
Q 031652 2 QASRARLFKEYKEVQREKSADPDIQLVCDDS-NIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHP 80 (155)
Q Consensus 2 ~~a~~RL~~E~~~l~~~~~~~~~i~~~~~~~-n~~~w~v~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HP 80 (155)
+.|.+||++|++++++++ ++||++.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 2 ~~a~~RL~kEl~~l~~~~--~~gi~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 79 (164)
T 3h8k_A 2 GTALKRLMAEYKQLTLNP--PEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHP 79 (164)
T ss_dssp CHHHHHHHHHHHHHHHSC--CTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCT
T ss_pred cHHHHHHHHHHHHHHhCC--CCCEEEEECCCCCccEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCCccC
Confidence 368999999999999998 99999997765 999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCeEEccCCC-------------CCCCCcCCHHHHHHHHHHHhcCCCCCCCcchhhhhhHHHHHHHHHHHHHhcc
Q 031652 81 NVHFKTGEICLDILK-------------NAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGMWTLFWYRLVEFISRYYP 147 (155)
Q Consensus 81 ni~~~~G~icl~~l~-------------~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~e~a~~~~~~~~~~~~~~k~~~ 147 (155)
||+ .+|.||+++|. ++|+|+++|++||.+|+++|.+|++++|+|.+||+ +|+++.++|.++++.
T Consensus 80 NV~-~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~ti~~vL~~i~~ll~~pn~~~p~n~~aa~--~~~~~~~~f~~~~~~ 156 (164)
T 3h8k_A 80 NIY-PDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASK--MWRDDREQFYKIAKQ 156 (164)
T ss_dssp TBC-TTSBBCCGGGSCSCSCCCSCCTTCCCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHHHHH--HHHHCHHHHHHHHHH
T ss_pred CCC-CCCcEeeecccCcccccccccccccCCCCCCcHHHHHHHHHHHHcCCCCCCccCHHHHH--HHHHCHHHHHHHHHH
Confidence 996 89999999996 78999999999999999999999999999999998 555666666666665
Q ss_pred ccccc
Q 031652 148 SVIMG 152 (155)
Q Consensus 148 ~v~~~ 152 (155)
++..+
T Consensus 157 ~~~~s 161 (164)
T 3h8k_A 157 IVQKS 161 (164)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 55443
No 15
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00 E-value=2.4e-46 Score=271.48 Aligned_cols=143 Identities=37% Similarity=0.707 Sum_probs=133.1
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCCeEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEecccccCC
Q 031652 2 QASRARLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPN 81 (155)
Q Consensus 2 ~~a~~RL~~E~~~l~~~~~~~~~i~~~~~~~n~~~w~v~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPn 81 (155)
+.|.+||++|++++++++ ++||++.+.++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 4 ~~~~~RL~kE~~~l~~~~--~~~i~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 81 (155)
T 1jat_A 4 ASLPKRIIKETEKLVSDP--VPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPN 81 (155)
T ss_dssp CSCCHHHHHHHHHHHHSC--CTTEEEEEETTEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCCBTT
T ss_pred HHHHHHHHHHHHHHHhCC--CCCEEEEECCCchhEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeecccccCC
Confidence 356799999999999998 999999998999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCeEEccCCCCCCCCcCCHHHHHHHHHHHhcCCCCCCCcchhhhhhHH-----HHHHHHHHHHHhcc
Q 031652 82 VHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGMWTL-----FWYRLVEFISRYYP 147 (155)
Q Consensus 82 i~~~~G~icl~~l~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~e~a~~~~-----~~~~~~~~~~k~~~ 147 (155)
|+ .+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||+++. |.+.++++.++++.
T Consensus 82 v~-~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~r~~~~~~a~ 151 (155)
T 1jat_A 82 ID-RLGRICLDVLKTNWSPALQIRTVLLSIQALLASPNPNDPLANDVAEDWIKNEQGAKAKAREWTKLYAK 151 (155)
T ss_dssp BC-TTCCBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSTTCCTTHHHHHHCHHHHHHHHHHHHHHHSE
T ss_pred CC-CCCEEEchhhccCCCCCCCHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcc
Confidence 97 8999999999999999999999999999999999999999999998543 66777777777664
No 16
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.2e-46 Score=276.98 Aligned_cols=145 Identities=32% Similarity=0.575 Sum_probs=136.1
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCeEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEecccccCCc
Q 031652 3 ASRARLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNV 82 (155)
Q Consensus 3 ~a~~RL~~E~~~l~~~~~~~~~i~~~~~~~n~~~w~v~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPni 82 (155)
.+.+||++|++++++++ ++||++.+.++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 30 ~~~~RL~kEl~~l~~~~--~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV 107 (179)
T 1i7k_A 30 PVGKRLQQELMTLMMSG--DKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNV 107 (179)
T ss_dssp CHHHHHHHHHHHHHHHC--CTTEEEEEETTEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSCCCSTTB
T ss_pred HHHHHHHHHHHHHHhCC--CCCEEEEEcCCcccccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecCCccCcc
Confidence 56799999999999998 8999999988999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCeEEccCCCCCCCCcCCHHHHHHHHHHHhcCCCCCCCcchhhhhhHHHHHHHHHHHHHhcccccccc
Q 031652 83 HFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGMWTLFWYRLVEFISRYYPSVIMGI 153 (155)
Q Consensus 83 ~~~~G~icl~~l~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~e~a~~~~~~~~~~~~~~k~~~~v~~~~ 153 (155)
+ .+|.||+++|.++|+|+++|++||.+|+++|.+|++++|+|.+||+ +| ++.++|.++++.++..++
T Consensus 108 ~-~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~Pn~~~Pln~~aa~--l~-~d~~~f~~~v~~~v~~~~ 174 (179)
T 1i7k_A 108 D-TQGNISLDILKEKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAE--LW-KNPTAFKKYLQETYSKQV 174 (179)
T ss_dssp C-TTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHH--HT-TSHHHHHHHHHHHHHTTC
T ss_pred c-cCCeEEcccCcCcCCCCCCHHHHHHHHHHHHhCCCCcchhhHHHHH--Hh-hCHHHHHHHHHHHHHHHh
Confidence 6 7999999999999999999999999999999999999999999998 55 778888888877776554
No 17
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=100.00 E-value=2.7e-46 Score=277.73 Aligned_cols=149 Identities=32% Similarity=0.655 Sum_probs=134.2
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCCeEEE-ecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEecccccC
Q 031652 2 QASRARLFKEYKEVQREKSADPDIQLV-CDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHP 80 (155)
Q Consensus 2 ~~a~~RL~~E~~~l~~~~~~~~~i~~~-~~~~n~~~w~v~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HP 80 (155)
+.|.+||++|++++++++ +.||++. ++++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 6 ~~a~kRL~kEl~~l~~~~--~~gi~~~~~~~~nl~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 83 (183)
T 3rz3_A 6 PSSQKALLLELKGLQEEP--VEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHP 83 (183)
T ss_dssp CHHHHHHHHHHHHHHHSC--CTTEEEEECTTCCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCCT
T ss_pred hHHHHHHHHHHHHHHhCC--CCCEEEEecCccchhheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCCCccC
Confidence 368899999999999999 9999999 7788999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCeEEccCCC-------------CCCCCcCCHHHHHHHHHHHhcCCCCCCCcchhhhhhHHHHH----HHHHHHH
Q 031652 81 NVHFKTGEICLDILK-------------NAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGMWTLFWY----RLVEFIS 143 (155)
Q Consensus 81 ni~~~~G~icl~~l~-------------~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~e~a~~~~~~~----~~~~~~~ 143 (155)
||+ .+|.||+++|. ++|+|+++|++||.+|+++|.+||+++|+|.|||+++.-.+ +.++|.+
T Consensus 84 nV~-~~G~iClsiL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~~~~~~~~~~~y~~ 162 (183)
T 3rz3_A 84 NIY-ETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYRKWKESKGKDREYTD 162 (183)
T ss_dssp TBC-TTSBBCCTTC--------------CCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHHHHHHHHHHHHTTTCCCHHHH
T ss_pred CCC-CCCcEehhhcCcccccccccccccCCCCCcCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHhcccccccHHHHHH
Confidence 996 79999999996 88999999999999999999999999999999998443211 4677888
Q ss_pred Hhcccccccc
Q 031652 144 RYYPSVIMGI 153 (155)
Q Consensus 144 k~~~~v~~~~ 153 (155)
+++++|..+.
T Consensus 163 ~v~~~v~~s~ 172 (183)
T 3rz3_A 163 IIRKQVLGTK 172 (183)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7777776543
No 18
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00 E-value=1.2e-45 Score=276.21 Aligned_cols=143 Identities=34% Similarity=0.638 Sum_probs=133.0
Q ss_pred ChHHHHHHHHHHHHHHhcCCCCCCeEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEecccccC
Q 031652 1 MQASRARLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHP 80 (155)
Q Consensus 1 m~~a~~RL~~E~~~l~~~~~~~~~i~~~~~~~n~~~w~v~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HP 80 (155)
|+.|.+||++|+++|++++ ++||++.+.++|+++|+++|.||+||||+||.|+|+|.||++||++||+|+|.|++|||
T Consensus 46 ~s~a~~RL~kEl~~l~~~~--~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HP 123 (194)
T 3bzh_A 46 LSTSAKRIQKELADITLDP--PPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHC 123 (194)
T ss_dssp HHHHHHHHHHHHHHHHHSC--CTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBT
T ss_pred ccHHHHHHHHHHHHHHhCC--CCCceeecccCccccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCCCccc
Confidence 3568899999999999998 89999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCeEEccCCCCCCCCcCCHHHHHHHHHHHhcCCCCCCCcchhhhhhHH-----HHHHHHHHHHHhc
Q 031652 81 NVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGMWTL-----FWYRLVEFISRYY 146 (155)
Q Consensus 81 ni~~~~G~icl~~l~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~e~a~~~~-----~~~~~~~~~~k~~ 146 (155)
||+ .+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||+++. |.+.++++.++++
T Consensus 124 NV~-~~G~ICL~iL~~~WsP~~ti~~vL~sI~~ll~~pnp~~Pln~~aa~l~~~d~~~f~~~ar~~t~~ya 193 (194)
T 3bzh_A 124 NIN-SQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYA 193 (194)
T ss_dssp TBC-TTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred eEC-CCCceechhhhccCCCcCcHHHHHHHHHHHHhCCCCccchhHHHHHHHHHCHHHHHHHHHHHHHHhh
Confidence 996 7999999999999999999999999999999999999999999998543 6666666666665
No 19
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2e-45 Score=270.04 Aligned_cols=142 Identities=38% Similarity=0.685 Sum_probs=133.8
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCeEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEecccccCCc
Q 031652 3 ASRARLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNV 82 (155)
Q Consensus 3 ~a~~RL~~E~~~l~~~~~~~~~i~~~~~~~n~~~w~v~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPni 82 (155)
.+.+||++|++++++++ ++||++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 4 ~~~~RL~kEl~~l~~~~--~~gi~~~~~~~~l~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv 81 (169)
T 1yh2_A 4 QRASRLKRELHMLATEP--PPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNI 81 (169)
T ss_dssp HHHHHHHHHHHHHHHSC--CTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred HHHHHHHHHHHHHHhCC--CCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCccccC
Confidence 57899999999999998 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCeEEccCCC----CCCCCcCCHHHHHHHHHHHhcCCCCCCCcchhhhhhHH-----HHHHHHHHHHHhcc
Q 031652 83 HFKTGEICLDILK----NAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGMWTL-----FWYRLVEFISRYYP 147 (155)
Q Consensus 83 ~~~~G~icl~~l~----~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~e~a~~~~-----~~~~~~~~~~k~~~ 147 (155)
+ .+|.||+++|. ++|+|+++|++||.+|+++|.+|++++|+|.+||+++. |.+.++++.+++|.
T Consensus 82 ~-~~G~iCl~iL~~~~~~~W~p~~~i~~vL~si~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~~~~a~ 154 (169)
T 1yh2_A 82 D-SAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPDDPLMADISSEFKYNKPAFLKNARQWTEKHAR 154 (169)
T ss_dssp C-TTCBBCCGGGSCTTTSCCCTTSCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSC
T ss_pred C-cCCeEecccccCCcccCCCCCCcHHHHHHHHHHHHhCCCCcchHhHHHHHHHHhhHHHHHHHHHHHHHHHcc
Confidence 7 89999999998 89999999999999999999999999999999998643 77777777777774
No 20
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=9.7e-46 Score=276.36 Aligned_cols=145 Identities=37% Similarity=0.733 Sum_probs=130.7
Q ss_pred HHHHHHHHHHHHHHhcCCC-----------CCCeEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeE
Q 031652 3 ASRARLFKEYKEVQREKSA-----------DPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQV 71 (155)
Q Consensus 3 ~a~~RL~~E~~~l~~~~~~-----------~~~i~~~~~~~n~~~w~v~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i 71 (155)
.|.+||++|++++++++.. ..||++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|
T Consensus 32 ~a~~RL~kEl~~l~k~~~~~~~~p~~~~~~~~gi~v~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V 111 (193)
T 2f4z_A 32 REQARLLKELADIQQLQRAHDSEPAATHSTSHGVSAQIVGGDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPYNPPKM 111 (193)
T ss_dssp CHHHHHHHHHHHHHHC----------------CEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEE
T ss_pred HHHHHHHHHHHHHHhCCCccccccccccCCCCcEEEEEcCCCcceEEEEEeCCCCCCcCCCEEEEEEECCCcCCCCCCeE
Confidence 4678999999999998821 27999999899999999999999999999999999999999999999999
Q ss_pred EEecccccCCccCCCCeEEccCCCCCCCCcCCHHHHHHHHHHHhcCCCCCCCcchhhhhhHH-----HHHHHHHHHHHhc
Q 031652 72 RFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGMWTL-----FWYRLVEFISRYY 146 (155)
Q Consensus 72 ~f~t~i~HPni~~~~G~icl~~l~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~e~a~~~~-----~~~~~~~~~~k~~ 146 (155)
+|.|++|||||+..+|.||+++|.++|+|+++|++||.+|+++|.+|++++|+|.+||+++. |.+.++++.++++
T Consensus 112 ~F~T~i~HPNI~~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~pnp~~P~n~~aa~l~~~d~~~f~~~ar~~t~~ya 191 (193)
T 2f4z_A 112 KFVTKIWHPNISSQTGAICLDILKHEWSPALTIRTALLSIQAMLADPVPTDPQDAEVAKMMIENHPLFVQTAKLWTETFA 191 (193)
T ss_dssp EESSCCCBTTBCTTTCBBCCGGGTTTCCTTSCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred EEecCCccCCCcCCCCEEECccccccCCCCCCHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHc
Confidence 99999999999756899999999999999999999999999999999999999999998653 6677777777776
Q ss_pred c
Q 031652 147 P 147 (155)
Q Consensus 147 ~ 147 (155)
+
T Consensus 192 ~ 192 (193)
T 2f4z_A 192 K 192 (193)
T ss_dssp C
T ss_pred c
Confidence 4
No 21
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00 E-value=1e-45 Score=278.38 Aligned_cols=148 Identities=39% Similarity=0.675 Sum_probs=135.3
Q ss_pred Ch-HHHHHHHHHHHHHHhcCC-CCCCeEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEecccc
Q 031652 1 MQ-ASRARLFKEYKEVQREKS-ADPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIF 78 (155)
Q Consensus 1 m~-~a~~RL~~E~~~l~~~~~-~~~~i~~~~~~~n~~~w~v~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~ 78 (155)
|| .|.+||++|+++++++.. .+.||++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|
T Consensus 2 Ms~~a~~Rl~kEl~~l~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~ 81 (201)
T 3k9o_A 2 MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIW 81 (201)
T ss_dssp --CTTHHHHHHHHHHHHTCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCC
T ss_pred CcHHHHHHHHHHHHHHHhCCCCCCCCEEEEECCCCccEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccccCcc
Confidence 66 689999999999998631 1679999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccCCCCeEEccCCCCCCCCcCCHHHHHHHHHHHhcCCCCCCCcchhhhhhHH-----HHHHHHHHHHHhccc
Q 031652 79 HPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGMWTL-----FWYRLVEFISRYYPS 148 (155)
Q Consensus 79 HPni~~~~G~icl~~l~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~e~a~~~~-----~~~~~~~~~~k~~~~ 148 (155)
||||+..+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||+++. |.+.++++.++++..
T Consensus 82 HPnv~~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~p~p~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~ 156 (201)
T 3k9o_A 82 HPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGA 156 (201)
T ss_dssp BTTBCTTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHHCC
T ss_pred cCCCcCCCCeeeCcccccCCCCCCCHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccc
Confidence 9999756999999999999999999999999999999999999999999998654 788888888888765
No 22
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=1.1e-45 Score=268.24 Aligned_cols=140 Identities=34% Similarity=0.653 Sum_probs=128.4
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCeEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEecccccCCc
Q 031652 3 ASRARLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNV 82 (155)
Q Consensus 3 ~a~~RL~~E~~~l~~~~~~~~~i~~~~~~~n~~~w~v~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPni 82 (155)
.|.+||++|++++++++ ++||++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 9 ~~~~RL~kEl~~l~~~~--~~~i~~~p~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 86 (156)
T 2e2c_A 9 SVSKRLQQELRTLLMSG--DPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNV 86 (156)
T ss_dssp CHHHHHHHHHHHHHHHC--CTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred HHHHHHHHHHHHHHhCC--CCCEEEEECCCCccEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCcccCCC
Confidence 57899999999999998 8999999989999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCeEEccCCCCCCCCcCCHHHHHHHHHHHhcCCCCCCCcchhhhhhH----HHHHHHHHHHHHh
Q 031652 83 HFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGMWT----LFWYRLVEFISRY 145 (155)
Q Consensus 83 ~~~~G~icl~~l~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~e~a~~~----~~~~~~~~~~~k~ 145 (155)
+ .+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||+++ .|.+.++++++++
T Consensus 87 ~-~~G~iCl~iL~~~W~p~~~i~~vL~si~~ll~~pn~~~p~n~~aa~~~~d~~~y~~~~~~~~~~~ 152 (156)
T 2e2c_A 87 D-QSGNICLDILKENWTASYDVRTILLSLQSLLGEPNNASPLNAQAADMWSNQTEYKKVLHEKYKTA 152 (156)
T ss_dssp C-TTCBBCCGGGTTTCCTTCCHHHHHHHHHHHTTSCCCSSCSCHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred c-cCceEECccccccCCCCCcHHHHHHHHHHHHhCCCCCCHHHHHHHHHhcCHHHHHHHHHHHHHHh
Confidence 6 799999999999999999999999999999999999999999999853 2444444444443
No 23
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00 E-value=7.7e-46 Score=281.10 Aligned_cols=144 Identities=41% Similarity=0.799 Sum_probs=136.1
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCCeEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEecccccCC
Q 031652 2 QASRARLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPN 81 (155)
Q Consensus 2 ~~a~~RL~~E~~~l~~~~~~~~~i~~~~~~~n~~~w~v~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPn 81 (155)
+.|.+||++|++++++.+ ++||++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 22 s~a~~RL~kEl~~l~~~~--~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPN 99 (216)
T 2pwq_A 22 SKELLRLQKELKDIENEN--VQEIDAHIKDSNFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTKIWHPN 99 (216)
T ss_dssp CHHHHHHHHHHHHHHHSC--TTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTT
T ss_pred CHHHHHHHHHHHHHHhCC--CCCEEEEEcCCccceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCCCcCCC
Confidence 368899999999999999 899999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCeEEccCCCCCCCCcCCHHHHHHHHHHHhcCCCCCCCcchhhhhhHH-----HHHHHHHHHHHhcc
Q 031652 82 VHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGMWTL-----FWYRLVEFISRYYP 147 (155)
Q Consensus 82 i~~~~G~icl~~l~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~e~a~~~~-----~~~~~~~~~~k~~~ 147 (155)
|+..+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||+++. |.+.+++|.++++.
T Consensus 100 I~~~~G~ICL~iL~~~WsP~~ti~~VL~sI~sLL~~Pnp~dPln~eaa~~~~~d~~~f~~~ar~~t~~ya~ 170 (216)
T 2pwq_A 100 ISSQTGAICLDVLKNEWSPALTIRTALLSIQALLSDPQPDDPQDAEVAKMYKENHALFVKTASVWTKTFAT 170 (216)
T ss_dssp BCTTTCBBCCHHHHHHCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSC
T ss_pred CcCCCCEEEchhhcccCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 9756899999999999999999999999999999999999999999998653 77888888888885
No 24
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00 E-value=1.8e-45 Score=267.33 Aligned_cols=143 Identities=29% Similarity=0.537 Sum_probs=127.4
Q ss_pred Ch-HHHHHHHHHHHHHHhcCCCCCCeEEEecC-----CCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEe
Q 031652 1 MQ-ASRARLFKEYKEVQREKSADPDIQLVCDD-----SNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFL 74 (155)
Q Consensus 1 m~-~a~~RL~~E~~~l~~~~~~~~~i~~~~~~-----~n~~~w~v~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~ 74 (155)
|| .|.+||++|++++++++ ++||++.+.+ +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.
T Consensus 1 Ms~~a~~RL~kE~~~l~~~~--~~g~~~~p~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~ 78 (157)
T 2gjd_A 1 MSSLCLQRLQEERKKWRKDH--PFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFP 78 (157)
T ss_dssp --CHHHHHHHHHHHHHHHCC--CTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECC
T ss_pred CChHHHHHHHHHHHHHHhCC--CCCEEEEeccccCCCCcccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeecc
Confidence 77 68899999999999999 9999998654 4899999999999999999999999999999999999999999
Q ss_pred cccccCCccCCCCeEEccCCCC--CCCCcCCHHHHHHHHHHHhcCCCCCCCcchhhhhhHH-----HHHHHHHHHHHhc
Q 031652 75 TKIFHPNVHFKTGEICLDILKN--AWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGMWTL-----FWYRLVEFISRYY 146 (155)
Q Consensus 75 t~i~HPni~~~~G~icl~~l~~--~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~e~a~~~~-----~~~~~~~~~~k~~ 146 (155)
|++|||||+ .+|.||+++|.. +|+|+++|++||.+|+++|.+|++++|+|.+||+++. |.+.+++++++++
T Consensus 79 t~i~HPnv~-~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a 156 (157)
T 2gjd_A 79 AGFYHPNVY-PSGTICLSILNEDQDWRPAITLKQIVLGVQDLLDSPNPNSPAQEPAWRSFSRNKAEYDKKVLLQAKQYS 156 (157)
T ss_dssp TTCCCTTBC-TTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHTSCCTTCCCCHHHHHHHHHCHHHHHHHHHHHHHHTB
T ss_pred CCCccCCCC-CCCcEeeecccCCCCCCCCCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhc
Confidence 999999996 899999999986 7999999999999999999999999999999998432 4455555555544
No 25
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00 E-value=2.5e-45 Score=267.86 Aligned_cols=141 Identities=30% Similarity=0.577 Sum_probs=128.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCeEEEecCC-----CcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeccc
Q 031652 3 ASRARLFKEYKEVQREKSADPDIQLVCDDS-----NIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKI 77 (155)
Q Consensus 3 ~a~~RL~~E~~~l~~~~~~~~~i~~~~~~~-----n~~~w~v~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i 77 (155)
.|.+||++|++++++++ ++||++.+.++ |+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++
T Consensus 10 ~~~~RL~kEl~~l~~~~--p~gi~~~p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t~i 87 (163)
T 3rcz_B 10 LCKTRLQEERKQWRRDH--PFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPL 87 (163)
T ss_dssp HHHHHHHHHHHHHHHSC--CTTCEEEEEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCC
T ss_pred HHHHHHHHHHHHHHhCC--CCCEEEEEccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeCCC
Confidence 57899999999999999 99999997655 999999999999999999999999999999999999999999999
Q ss_pred ccCCccCCCCeEEccCCCC--CCCCcCCHHHHHHHHHHHhcCCCCCCCcchhhhhhHH-----HHHHHHHHHHHhc
Q 031652 78 FHPNVHFKTGEICLDILKN--AWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGMWTL-----FWYRLVEFISRYY 146 (155)
Q Consensus 78 ~HPni~~~~G~icl~~l~~--~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~e~a~~~~-----~~~~~~~~~~k~~ 146 (155)
|||||+ .+|.||+++|.. +|+|+++|++||.+|+++|.+|++++|+|.+||+++. |.+.++++++++|
T Consensus 88 ~HPnV~-~~G~iCl~iL~~~~~W~p~~ti~~vL~~i~~ll~~P~~~~p~n~~aa~~~~~d~~~y~~~~r~~~~~ya 162 (163)
T 3rcz_B 88 FHPNVY-PSGTVCLSILNEEEGWKPAITIKQILLGIQDLLDDPNIASPAQTEAYTMFKKDKVEYEKRVRAQARENA 162 (163)
T ss_dssp CSTTBC-TTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHTSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHTC
T ss_pred ccCCCC-CCCcEeccccCCCCCcCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 999996 899999999985 5999999999999999999999999999999998543 5555666665554
No 26
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00 E-value=4.6e-45 Score=266.20 Aligned_cols=144 Identities=30% Similarity=0.595 Sum_probs=129.3
Q ss_pred Ch-HHHHHHHHHHHHHHhcCCCCCCeEEEec-----CCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEe
Q 031652 1 MQ-ASRARLFKEYKEVQREKSADPDIQLVCD-----DSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFL 74 (155)
Q Consensus 1 m~-~a~~RL~~E~~~l~~~~~~~~~i~~~~~-----~~n~~~w~v~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~ 74 (155)
|+ .|.+||++|++++++++ ++||.+.+. ++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.
T Consensus 4 M~~~a~~RL~kE~~~l~~~~--~~g~~~~p~~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~ 81 (161)
T 2grr_A 4 MSGIALSRLAQERKAWRKDH--PFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFE 81 (161)
T ss_dssp CCHHHHHHHHHHHHHHHHSC--CTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEES
T ss_pred ccHHHHHHHHHHHHHHHhCC--CCCEEEEeccccCCCCCccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEe
Confidence 66 57899999999999999 899999865 36899999999999999999999999999999999999999999
Q ss_pred cccccCCccCCCCeEEccCCCC--CCCCcCCHHHHHHHHHHHhcCCCCCCCcchhhhhhHH-----HHHHHHHHHHHhcc
Q 031652 75 TKIFHPNVHFKTGEICLDILKN--AWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGMWTL-----FWYRLVEFISRYYP 147 (155)
Q Consensus 75 t~i~HPni~~~~G~icl~~l~~--~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~e~a~~~~-----~~~~~~~~~~k~~~ 147 (155)
|++|||||+ .+|.||+++|.. +|+|+++|.+||.+|+++|.+|++++|+|.+||+++. |.+.+++++++++.
T Consensus 82 t~i~HPnv~-~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~ 160 (161)
T 2grr_A 82 PPLFHPNVY-PSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQSPAQAEAYTIYCQNRVEYEKRVRAQAKKFAP 160 (161)
T ss_dssp SCCCSTTBC-TTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHTCC
T ss_pred cCcccCCCC-CCCeEeehhcCCCCCcCCCCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHhc
Confidence 999999997 899999999985 8999999999999999999999999999999998543 55555555555543
No 27
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=100.00 E-value=3.5e-45 Score=269.27 Aligned_cols=141 Identities=33% Similarity=0.699 Sum_probs=108.2
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCeEEEecC-CCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEecccccCC
Q 031652 3 ASRARLFKEYKEVQREKSADPDIQLVCDD-SNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPN 81 (155)
Q Consensus 3 ~a~~RL~~E~~~l~~~~~~~~~i~~~~~~-~n~~~w~v~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPn 81 (155)
.|.+||++|+++|++++ ++||++.+.+ +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 17 ~~~~rL~kEl~~l~~~~--~~gi~~~p~~~~nl~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~i~HPN 94 (172)
T 2awf_A 17 RGSLLLRRQLAELNKNP--VEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPN 94 (172)
T ss_dssp TTHHHHHHHHHHHHHSC--CTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTT
T ss_pred HHHHHHHHHHHHHHhCC--CCCEEEEECCCccccccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccCCCccCC
Confidence 57899999999999998 9999999765 79999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCeEEccCCC-------------CCCCCcCCHHHHHHHHHHHhcCCCCCCCcchhhhhhHHHHHHHH-HHHHHhcc
Q 031652 82 VHFKTGEICLDILK-------------NAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGMWTLFWYRLV-EFISRYYP 147 (155)
Q Consensus 82 i~~~~G~icl~~l~-------------~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~e~a~~~~~~~~~~-~~~~k~~~ 147 (155)
|+ .+|.||+++|. ++|+|+++|++||.+|+++|.+|++++|+|.+||+ +|+++.+ +|.++++.
T Consensus 95 V~-~~G~IClsiL~~~~~d~~~~~~~~~~WsP~~ti~~vL~sI~sll~~Pn~~~p~n~~aa~--~~~~d~~~~f~~~vr~ 171 (172)
T 2awf_A 95 VD-KNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAK--EWREDRNGEFKRKVAR 171 (172)
T ss_dssp BC-TTCBBCCGGGSCC---------CTTSCCTTCCHHHHHHHHHHHHSCC------------------------------
T ss_pred CC-CCCcEehhhcCCcccccccccccCCCCCCcCcHHHHHHHHHHHHHCcCCCCccCHHHHH--HHHHCcHHHHHHHHHh
Confidence 96 78999999996 68999999999999999999999999999999999 6778888 88888765
Q ss_pred c
Q 031652 148 S 148 (155)
Q Consensus 148 ~ 148 (155)
+
T Consensus 172 ~ 172 (172)
T 2awf_A 172 C 172 (172)
T ss_dssp -
T ss_pred C
Confidence 3
No 28
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=4.5e-45 Score=265.94 Aligned_cols=144 Identities=28% Similarity=0.565 Sum_probs=133.3
Q ss_pred ChHHHHHHHHHHHHHHhcCCCCCCeEEE-ecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeccccc
Q 031652 1 MQASRARLFKEYKEVQREKSADPDIQLV-CDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFH 79 (155)
Q Consensus 1 m~~a~~RL~~E~~~l~~~~~~~~~i~~~-~~~~n~~~w~v~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~H 79 (155)
|+.|.+||++|++++ .+ ++|+++. +.++|+++|+++| ||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 4 ~~~~~~RL~kEl~~l--~~--~~~~~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 78 (160)
T 1y8x_A 4 ASAAQLRIQKDINEL--NL--PKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYH 78 (160)
T ss_dssp CCHHHHHHHHHHHTC--CC--CTTEEEECSSTTCTTEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCCCB
T ss_pred ccHHHHHHHHHHHhc--CC--CCCeEEEeccCCccceEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCCcc
Confidence 568999999999999 45 7899998 7889999999998 9999999999999999999999999999999999999
Q ss_pred CCccCCCCeEEccCCCCCCCCcCCHHHHHHHHHHHhcCCCCCCCcchhhhhhHHHHHHHHHHHHHhccccccc
Q 031652 80 PNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGMWTLFWYRLVEFISRYYPSVIMG 152 (155)
Q Consensus 80 Pni~~~~G~icl~~l~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~e~a~~~~~~~~~~~~~~k~~~~v~~~ 152 (155)
|||+ .+|.||+++|.++|+|+++|++||.+|+++|.+|++++|+|.+||+ +|.++.++|.++++.+|..|
T Consensus 79 Pnv~-~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~Pn~~~p~n~~aa~--~~~~~~~~f~~~v~~~v~~~ 148 (160)
T 1y8x_A 79 PNID-LEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAE--VLQNNRRLFEQNVQRSMRGG 148 (160)
T ss_dssp TTBC-TTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCCSSCSCHHHHH--HHHSCHHHHHHHHHHHHHSE
T ss_pred CcCC-CCCeEEcccchhhccCCCCHHHHHHHHHHHHhCCCCCCccCHHHHH--HHHHCHHHHHHHHHHHHhhC
Confidence 9997 7899999999999999999999999999999999999999999998 66678888888887776554
No 29
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=100.00 E-value=1.2e-44 Score=266.43 Aligned_cols=148 Identities=36% Similarity=0.683 Sum_probs=127.7
Q ss_pred Ch-HHHHHHHHHHHHHHh-c-CC-----CCC--CeEEEe-cCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCC
Q 031652 1 MQ-ASRARLFKEYKEVQR-E-KS-----ADP--DIQLVC-DDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPP 69 (155)
Q Consensus 1 m~-~a~~RL~~E~~~l~~-~-~~-----~~~--~i~~~~-~~~n~~~w~v~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP 69 (155)
|+ .|.+||++|++++++ . +. ... ++.+.+ .++|+++|+++|.||++|||+||.|+++|.||++||++||
T Consensus 3 Ms~~~~~RL~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP 82 (172)
T 2y9m_A 3 MADTCMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNPP 82 (172)
T ss_dssp -CHHHHHHHHHHHHHHHHHHTCCCTTTCTTTTTEEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCC
T ss_pred CcHHHHHHHHHHHHHHHhccCCcccccCCCCcceEEEecCCCCchhEEEEEEECCCCCcccCCEEEEEEECCCcCCCCCC
Confidence 55 478999999999998 5 31 022 356667 7889999999999999999999999999999999999999
Q ss_pred eEEEec-ccccCCccCCCCeEEccCCC-CCCCCcCCHHHHHHHHHHHhcCCCCCCCcchhhhhhHHHHH-HHHHHHHHhc
Q 031652 70 QVRFLT-KIFHPNVHFKTGEICLDILK-NAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGMWTLFWY-RLVEFISRYY 146 (155)
Q Consensus 70 ~i~f~t-~i~HPni~~~~G~icl~~l~-~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~e~a~~~~~~~-~~~~~~~k~~ 146 (155)
+|+|.| ++|||||++.+|.||+++|. ++|+|+++|++||.+|+++|.+|++++|+|.|||+ +|.+ +.++|.++++
T Consensus 83 ~v~f~t~~i~HPni~~~~G~iCl~iL~~~~W~p~~~i~~vL~si~~ll~~p~~~~p~n~~aa~--~~~~~d~~~f~~~~~ 160 (172)
T 2y9m_A 83 KISFMQNNILHCNVKSATGEICLNILKPEEWTPVWDLLHCVHAVWRLLREPVCDSPLDVDIGN--IIRCGDMSAYQGIVK 160 (172)
T ss_dssp EEEECTTSCCCTTEETTTTEECCGGGSTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHH--HHTTTCHHHHHHHHH
T ss_pred EEEEeeCCeecCCCcCCCCEEeccccCCCCCCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHH--HHHhCCHHHHHHHHH
Confidence 999999 99999998789999999998 89999999999999999999999999999999998 4445 5555555555
Q ss_pred cccc
Q 031652 147 PSVI 150 (155)
Q Consensus 147 ~~v~ 150 (155)
..+.
T Consensus 161 ~~~~ 164 (172)
T 2y9m_A 161 YFLA 164 (172)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5443
No 30
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=100.00 E-value=1.8e-44 Score=279.10 Aligned_cols=146 Identities=39% Similarity=0.675 Sum_probs=135.3
Q ss_pred HHHHHHHHHHHHHHhcCC-CCCCeEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEecccccCC
Q 031652 3 ASRARLFKEYKEVQREKS-ADPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPN 81 (155)
Q Consensus 3 ~a~~RL~~E~~~l~~~~~-~~~~i~~~~~~~n~~~w~v~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPn 81 (155)
.|.+||++|+++|+++.. .+.||++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 57 ~a~~RL~kEl~~l~~~~~~~~~gi~v~p~~dnl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPN 136 (253)
T 3e46_A 57 IAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPN 136 (253)
T ss_dssp HHHHHHHHHHHHHHHCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTT
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeecCCCccCC
Confidence 578999999999998631 1679999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCeEEccCCCCCCCCcCCHHHHHHHHHHHhcCCCCCCCcchhhhhhHH-----HHHHHHHHHHHhccc
Q 031652 82 VHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGMWTL-----FWYRLVEFISRYYPS 148 (155)
Q Consensus 82 i~~~~G~icl~~l~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~e~a~~~~-----~~~~~~~~~~k~~~~ 148 (155)
|+..+|.||+++|.++|+|+++|++||.+|+++|.+||+++|+|.+||+++. |.+.++++.++++..
T Consensus 137 V~~~~G~ICL~iL~~~WsP~~ti~~vL~sI~~ll~~pnp~~Pln~eaa~l~~~d~~~f~~~ar~~t~~yA~~ 208 (253)
T 3e46_A 137 ISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGA 208 (253)
T ss_dssp BCTTTCBBCCGGGTTCCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHHCC
T ss_pred ccCCCCeeecccccCCCCCCCCHHHHHHHHHHHhcCCCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHhccc
Confidence 9756999999999999999999999999999999999999999999998654 778888888888765
No 31
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=100.00 E-value=1.5e-44 Score=262.01 Aligned_cols=141 Identities=33% Similarity=0.661 Sum_probs=130.1
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCeEE-EecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEecccccCC
Q 031652 3 ASRARLFKEYKEVQREKSADPDIQL-VCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPN 81 (155)
Q Consensus 3 ~a~~RL~~E~~~l~~~~~~~~~i~~-~~~~~n~~~w~v~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPn 81 (155)
+|.+||++|++++++++ ++||.+ .+.++|+++|+++|. |++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 4 ~~~~RL~kEl~~l~~~~--~~~i~~~~~~~~~l~~w~~~I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 80 (155)
T 1wzv_A 4 MASMRVVKELEDLQKKP--PPYLRNLSSDDANVLVWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPN 80 (155)
T ss_dssp -CHHHHHHHHHHHHHSC--CTTEEEEEECSSCTTEEEEEEC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCCBTT
T ss_pred hHHHHHHHHHHHHHhCC--CCCEEEEecCCCchheEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCccCc
Confidence 47899999999999999 899999 688899999999999 99999999999999999999999999999999999999
Q ss_pred ccCCCCeEEccCC-CCCCCCcCCHHHHHHHHHHHhcCCCCCCCcchhhhhhHH-----HHHHHHHHHHHhcc
Q 031652 82 VHFKTGEICLDIL-KNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGMWTL-----FWYRLVEFISRYYP 147 (155)
Q Consensus 82 i~~~~G~icl~~l-~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~e~a~~~~-----~~~~~~~~~~k~~~ 147 (155)
|+ .+|.||+++| .++|+|+++|.+||.+|+++|.+|++++|+|.+||+++. |.+.++++.++++.
T Consensus 81 V~-~~G~iCl~iL~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~~~~a~ 151 (155)
T 1wzv_A 81 VD-ENGQICLPIISSENWKPCTKTCQVLEALNVLVNRPNIREPLRMDLADLLTQNPELFRKNAEEFTLRFGV 151 (155)
T ss_dssp BC-TTCBCCCGGGCTTTCCTTCCHHHHHHHHHHHHHSCCSSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCE
T ss_pred CC-CCCeEeecCCCccCCCCCCcHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 97 7999999999 799999999999999999999999999999999998543 66666667666664
No 32
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=100.00 E-value=3.8e-44 Score=262.76 Aligned_cols=142 Identities=33% Similarity=0.633 Sum_probs=128.6
Q ss_pred ChHHHHHHHHHHHHHHhcCCCCCCeEEEe-cCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeccccc
Q 031652 1 MQASRARLFKEYKEVQREKSADPDIQLVC-DDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFH 79 (155)
Q Consensus 1 m~~a~~RL~~E~~~l~~~~~~~~~i~~~~-~~~n~~~w~v~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~H 79 (155)
++.+.+||++|++++++++ +.||++.+ .++|++.|+++| ||++|||+||.|+++|.||++||++||+|+|.|++||
T Consensus 12 ~s~~~~RL~kEl~~l~~~~--~~gi~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~H 88 (167)
T 3fn1_B 12 VSVRDKLLVKEVAELEANL--PCTCKVHFPDPNKLHCFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWH 88 (167)
T ss_dssp CCHHHHHHHHHHHHHGGGS--CTTEEEECSSSSCTTEEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEEECSCCCC
T ss_pred hhHHHHHHHHHHHHHHhCC--CCCEEEEeCCCCcceeEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeEecCCccc
Confidence 3578899999999999999 89999984 567899999998 8999999999999999999999999999999999999
Q ss_pred CCccCCCCeEEccCCCC------CCCCcCCHHHHHHHHHHHhcC-CCCCCCcchhhhhhHH-----HHHHHHHHHHHhc
Q 031652 80 PNVHFKTGEICLDILKN------AWSPAWTLQSVCRAIIALMAH-PEPDSPLNCDSGMWTL-----FWYRLVEFISRYY 146 (155)
Q Consensus 80 Pni~~~~G~icl~~l~~------~W~p~~~i~~iL~~i~~~l~~-p~~~~p~n~e~a~~~~-----~~~~~~~~~~k~~ 146 (155)
|||+ .+|.||+++|.. +|+|+++|++||.+|+++|.+ ||+++|+|.|||+++. |.+.++++++++|
T Consensus 89 Pnv~-~~G~iCl~iL~~~~~~~~~W~p~~~i~~vl~~i~~ll~~~pn~~~p~n~eaa~~~~~~~~~f~~~~r~~~~~~A 166 (167)
T 3fn1_B 89 PNIT-ETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRNKVDDYIKRYA 166 (167)
T ss_dssp SSBC-TTCCBCCGGGSBCSSSTTSBCTTCCHHHHHHHHHHTTTTTCCSSSCSCHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred CCCC-CCCEEechhhccCCCCCCCCCCcCcHHHHHHHHHHHHcCCCCCCcchhHHHHHHHHHCHHHHHHHHHHHHHHhc
Confidence 9996 899999999975 799999999999999999999 6999999999998543 5666666666665
No 33
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=100.00 E-value=7.3e-45 Score=275.58 Aligned_cols=145 Identities=37% Similarity=0.677 Sum_probs=133.8
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCCeEEEecCC-CcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEecccccC
Q 031652 2 QASRARLFKEYKEVQREKSADPDIQLVCDDS-NIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHP 80 (155)
Q Consensus 2 ~~a~~RL~~E~~~l~~~~~~~~~i~~~~~~~-n~~~w~v~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HP 80 (155)
|+|.+||++|++++++++ ++||++.+.++ ++++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 1 s~a~~RL~kEl~~l~~~~--~~gi~~~p~~~~~l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HP 78 (215)
T 1tte_A 1 SSRAKRIMKEIQAVKDDP--AAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHP 78 (215)
T ss_dssp CTTHHHHHHHHHHHHTTT--CTTCEECCCSSSSCCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCCCS
T ss_pred ChHHHHHHHHHHHHHhCC--CCCEEEEECCCccccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCccC
Confidence 468899999999999998 99999998766 466999999999999999999999999999999999999999999999
Q ss_pred CccCCCCeEEccCCCCCCCCcCCHHHHHHHHHHHhcCCCCCCCcchhhhhhHH-----HHHHHHHHHHHhccc
Q 031652 81 NVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGMWTL-----FWYRLVEFISRYYPS 148 (155)
Q Consensus 81 ni~~~~G~icl~~l~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~e~a~~~~-----~~~~~~~~~~k~~~~ 148 (155)
||+..+|.||+++|.++|+|++||.+||.+|+++|.+|++++|+|.+||+++. |.+.++++.++++..
T Consensus 79 NI~~~~G~ICL~iL~~~WsP~~ti~~VL~sI~sLL~~Pnp~~Pln~eaa~~~~~d~~~f~~~ar~~t~~yA~~ 151 (215)
T 1tte_A 79 NISSVTGAICLDILRNAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYASE 151 (215)
T ss_dssp SSCSSSSCCCSSTTTCCSCTTCCHHHHHHHHHHHHTSCCCSSCSCHHHHHHHHHCHHHHHHHHHHHHHHSSCC
T ss_pred cCcCCCCEEECccCCCCCCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhccC
Confidence 99733999999999999999999999999999999999999999999998653 778888888888753
No 34
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=3e-44 Score=265.90 Aligned_cols=143 Identities=27% Similarity=0.545 Sum_probs=132.9
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCCeEEE-ecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEecccccC
Q 031652 2 QASRARLFKEYKEVQREKSADPDIQLV-CDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHP 80 (155)
Q Consensus 2 ~~a~~RL~~E~~~l~~~~~~~~~i~~~-~~~~n~~~w~v~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HP 80 (155)
+.|.+||++|++++ ++ ++||++. +.++|+++|+++| ||++|||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 25 ~~~~~RL~kEl~~l--~~--~~~i~~~~p~~~nl~~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~i~HP 99 (180)
T 2nvu_C 25 SAAQLRIQKDINEL--NL--PKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHP 99 (180)
T ss_dssp CHHHHHHHHHHHTC--CC--CTTEEEECSSTTCTTEEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSCCCBT
T ss_pred cHHHHHHHHHHHhc--CC--CCCeEEEecccccccceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceeccCccC
Confidence 46889999999999 45 7899998 7889999999998 99999999999999999999999999999999999999
Q ss_pred CccCCCCeEEccCCCCCCCCcCCHHHHHHHHHHHhcCCCCCCCcchhhhhhHHHHHHHHHHHHHhccccccc
Q 031652 81 NVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGMWTLFWYRLVEFISRYYPSVIMG 152 (155)
Q Consensus 81 ni~~~~G~icl~~l~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~e~a~~~~~~~~~~~~~~k~~~~v~~~ 152 (155)
||+ .+|.||+++|.++|+|+++|++||.+|+++|.+|++++|+|.+||+ +|.++.++|.++++.+|..|
T Consensus 100 NV~-~~G~iCl~iL~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~--~~~~d~~~f~~~v~~~v~~~ 168 (180)
T 2nvu_C 100 NID-LEGNVALNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAE--VLQNNRRLFEQNVQRSMRGG 168 (180)
T ss_dssp TBC-TTSBBCCGGGTTSCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHH--HHHHCHHHHHHHHHHHHHSE
T ss_pred CCC-CCCcEEcccccccCCCCCCHHHHHHHHHHHHhCCCCCCccCHHHHH--HHHHCHHHHHHHHHHHHhhC
Confidence 996 7999999999999999999999999999999999999999999998 66778888888888777654
No 35
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=100.00 E-value=1.2e-44 Score=261.67 Aligned_cols=141 Identities=26% Similarity=0.657 Sum_probs=126.1
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCCeEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEecccccCC
Q 031652 2 QASRARLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPN 81 (155)
Q Consensus 2 ~~a~~RL~~E~~~l~~~~~~~~~i~~~~~~~n~~~w~v~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPn 81 (155)
++|.+||++|++++++. |+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 1 ~sa~~Rl~kEl~~l~~~-----~~~v~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 75 (152)
T 2onu_A 1 GTSLTRKQCDFTKLIMA-----GYDLELNNGSTQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLHPN 75 (152)
T ss_dssp --CCCHHHHTHHHHHHH-----TCCEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTT
T ss_pred ChHHHHHHHHHHhcCcC-----CCEEEEccCccceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCccCc
Confidence 35789999999999864 5778888899999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCeEEccCCCCCCCCcCCHHHHHHH-HHHHhcCCCCCCCcchhhhhhHH-----HHHHHHHHHHHhcc
Q 031652 82 VHFKTGEICLDILKNAWSPAWTLQSVCRA-IIALMAHPEPDSPLNCDSGMWTL-----FWYRLVEFISRYYP 147 (155)
Q Consensus 82 i~~~~G~icl~~l~~~W~p~~~i~~iL~~-i~~~l~~p~~~~p~n~e~a~~~~-----~~~~~~~~~~k~~~ 147 (155)
|+..+|.||+++|.++|+|+++|.+||.+ |+++|.+|++++|+|.+||+++. |.+.+++++++++.
T Consensus 76 i~~~~G~iCl~il~~~W~p~~~i~~vl~~ii~~Ll~~Pn~~~P~n~~aa~~~~~d~~~y~~~v~~~~~~~a~ 147 (152)
T 2onu_A 76 VDEASGSVCLDVINQTWTPLYSLVNVFEVFLPQLLTYPNPSDPLNSDAASLLMKDKNIYEEKVKEYVKLYAS 147 (152)
T ss_dssp BCTTTCBBCHHHHHHHCCTTCCHHHHHHTHHHHHHHSCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHSC
T ss_pred CcCcCCeEecccccccCCCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcc
Confidence 97568999999999999999999999999 68999999999999999998543 66666666666654
No 36
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=100.00 E-value=4e-43 Score=261.91 Aligned_cols=144 Identities=33% Similarity=0.627 Sum_probs=132.9
Q ss_pred ChHHHHHHHHHHHHHHhcCCCCCCeEEE----ecCCCcc---eEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEE
Q 031652 1 MQASRARLFKEYKEVQREKSADPDIQLV----CDDSNIF---KWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRF 73 (155)
Q Consensus 1 m~~a~~RL~~E~~~l~~~~~~~~~i~~~----~~~~n~~---~w~v~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f 73 (155)
++.|.+||++|+++++ . ++|+++. ++++|++ +|+++|. |++|||+||.|+++|.||++||++||+|+|
T Consensus 27 ~s~a~~RL~kEl~~l~--~--~~~i~~~~~~~p~~~nl~~~~~w~~~I~-p~~tpyegg~f~~~i~fp~~YP~~PP~v~f 101 (190)
T 3o2u_A 27 LSAARIRLKRDLDSLD--L--PPTVTLNVITSPDSADRSQSPKLEVIVR-PDEGYYNYGSINFNLDFNEVYPIEPPKVVC 101 (190)
T ss_dssp CCHHHHHHHHHHHTCC--C--CTTEEEEEEECTTCCCTTSCCEEEEEEC-CSSSTTTTCCEEEEEECCTTTTTSCCEEEE
T ss_pred ccHHHHHHHHHHHhcc--C--CCCEEEEecCCCCCccCCcCCeEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCceeEE
Confidence 3578999999999998 5 7899998 7889999 9999997 888999999999999999999999999999
Q ss_pred ecccccCCccCCCCeEEccCCCCCCCCcCCHHHHHHHHHHHhcCCCCCCCcchhhhhhHHHHHHHHHHHHHhccccccc
Q 031652 74 LTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGMWTLFWYRLVEFISRYYPSVIMG 152 (155)
Q Consensus 74 ~t~i~HPni~~~~G~icl~~l~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~e~a~~~~~~~~~~~~~~k~~~~v~~~ 152 (155)
.|++|||||+ .+|.||+++|.++|+|+++|++||.+|+++|.+||+++|+|.+||+ +|.++.++|.++++..+..|
T Consensus 102 ~t~i~HPnV~-~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~pn~~~pln~~aa~--~~~~d~~~f~~~ar~~~~~~ 177 (190)
T 3o2u_A 102 LKKIFHPNID-LKGNVCLNILREDWSPALDLQSIITGLLFLFLEPNPNDPLNKDAAK--LLCEGEKEFAEAVRLTMSGG 177 (190)
T ss_dssp CSCCCCTTBC-TTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHH--HHHTCHHHHHHHHHHHHBTC
T ss_pred ecCcccCCCC-CCCeEechhccCCCCCCCCHHHHHHHHHHHHhCCCCCcchhHHHHH--HHHHCHHHHHHHHHHHHHhc
Confidence 9999999996 7999999999999999999999999999999999999999999998 66677788888887776554
No 37
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.1e-43 Score=260.83 Aligned_cols=139 Identities=28% Similarity=0.671 Sum_probs=125.4
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCeEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEecccccCCc
Q 031652 3 ASRARLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNV 82 (155)
Q Consensus 3 ~a~~RL~~E~~~l~~~~~~~~~i~~~~~~~n~~~w~v~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPni 82 (155)
.|.+||++|++++++ +|+++.+. +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 25 ~a~~RL~kEl~~l~~-----~g~~v~~~-ddl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~i~HPNV 98 (179)
T 2z5d_A 25 PGKRRMDTDVIKLIE-----SKHEVTIL-GGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNI 98 (179)
T ss_dssp HHHHHHHHHHHHHHH-----SSSCEEEE-EETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTB
T ss_pred HHHHHHHHHHHhcCc-----CCCEEEEC-CCCceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecCCccCcC
Confidence 478999999999984 36778776 578999999999999999999999999999999999999999999999999
Q ss_pred cCCCCeEEccCCCCCCCCcCCHHHHHHH-HHHHhcCCCCCCCcchhhhhhHH-----HHHHHHHHHHHhcc
Q 031652 83 HFKTGEICLDILKNAWSPAWTLQSVCRA-IIALMAHPEPDSPLNCDSGMWTL-----FWYRLVEFISRYYP 147 (155)
Q Consensus 83 ~~~~G~icl~~l~~~W~p~~~i~~iL~~-i~~~l~~p~~~~p~n~e~a~~~~-----~~~~~~~~~~k~~~ 147 (155)
+..+|.||+++|.++|+|+++|++||.+ |+++|.+|++++|+|.+||+++. |.+.+++++++++.
T Consensus 99 ~~~~G~ICL~iL~~~WsP~~ti~~iL~s~I~~Ll~~Pn~~~p~n~eaa~~~~~d~~~y~~~vr~~~~~~a~ 169 (179)
T 2z5d_A 99 DEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYAT 169 (179)
T ss_dssp CTTTCBBCHHHHHHHCCTTCCTTHHHHTHHHHHHHSCCCSSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSS
T ss_pred CCCCCeEeccccccCCCCCCCHHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHcc
Confidence 6339999999999999999999999999 99999999999999999998543 66777777777664
No 38
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=100.00 E-value=2.7e-43 Score=255.12 Aligned_cols=142 Identities=33% Similarity=0.744 Sum_probs=128.4
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCeEEE-ecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEecccccCC
Q 031652 3 ASRARLFKEYKEVQREKSADPDIQLV-CDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPN 81 (155)
Q Consensus 3 ~a~~RL~~E~~~l~~~~~~~~~i~~~-~~~~n~~~w~v~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPn 81 (155)
.|.+||++|++++++++ ++|+.+. +.++|+++|+++|. |++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 2 ~a~~RL~kEl~~l~~~~--~~~~~~~~~~~~~l~~w~~~i~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 78 (154)
T 1c4z_D 2 AASRRLMKELEEIRKCG--MKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPN 78 (154)
T ss_dssp --CTTHHHHHTTCSSSC--CSSCEEECSSCSSSSEEEEEEC-CCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCCTT
T ss_pred cHHHHHHHHHHHHHhCC--CCCEEEeeCCCCchheEEEEEe-CCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCcccc
Confidence 46799999999999998 8899865 56789999999998 99999999999999999999999999999999999999
Q ss_pred ccCCCCeEEccCCC-CCCCCcCCHHHHHHHHHHHhcCCCCCCCcchhhhhhHH-----HHHHHHHHHHHhccc
Q 031652 82 VHFKTGEICLDILK-NAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGMWTL-----FWYRLVEFISRYYPS 148 (155)
Q Consensus 82 i~~~~G~icl~~l~-~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~e~a~~~~-----~~~~~~~~~~k~~~~ 148 (155)
|+ .+|.||+++|. ++|+|++++.+||.+|+++|.+|++++|+|.+||+++. |.+.++++.++++..
T Consensus 79 v~-~~G~iCl~iL~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 150 (154)
T 1c4z_D 79 ID-EKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKYGEK 150 (154)
T ss_dssp BC-TTCBBCCTTTSSSSCCTTCCHHHHHHHHHHHHHSCCCSSCSCHHHHHHHHTCSSTTHHHHHHHHTTC---
T ss_pred CC-CCCEEECCCCCCCCCCCCCcHHHHHHHHHHHHcCCCCCchhhHHHHHHHHHhHHHHHHHHHHHHHHhccc
Confidence 96 79999999997 89999999999999999999999999999999998654 778888888887753
No 39
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=100.00 E-value=5.5e-42 Score=280.99 Aligned_cols=143 Identities=35% Similarity=0.695 Sum_probs=134.6
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCCeEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEecccccCC
Q 031652 2 QASRARLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPN 81 (155)
Q Consensus 2 ~~a~~RL~~E~~~l~~~~~~~~~i~~~~~~~n~~~w~v~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPn 81 (155)
++|.+||++|++++++++ ++||++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 2 s~a~~RL~kEl~~l~~~~--~~~~~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 79 (399)
T 4ddg_A 2 AMALKRIHKELNDLARDP--PAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPN 79 (399)
T ss_dssp HHHHHHHHHHHHHHHHSC--CSSEEEEEETTEEEEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCCCTT
T ss_pred cHHHHHHHHHHHHHHhCC--CCCEEEEEcCCcceEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeeccccccc
Confidence 689999999999999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCeEEccCCCCCCCCcCCHHHHHHHHHHHhcCCCCCCCcchhhhhhHH-----HHHHHHHHHHHhcc
Q 031652 82 VHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGMWTL-----FWYRLVEFISRYYP 147 (155)
Q Consensus 82 i~~~~G~icl~~l~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~e~a~~~~-----~~~~~~~~~~k~~~ 147 (155)
|+ .+|.||+++|.++|+|+++|.+||.+|+++|.+||+++|+|.+||+++. |.+.++++.++++.
T Consensus 80 v~-~~G~iCl~il~~~W~p~~~i~~vL~~i~~ll~~pnp~~p~n~~aa~~~~~d~~~y~~~~~~~~~~~a~ 149 (399)
T 4ddg_A 80 IN-SNGSISLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAM 149 (399)
T ss_dssp BC-TTCBBCCGGGTTSCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHTS
T ss_pred cC-CCCeEeCcccccCCCccccHHHHHHHHHHHHcCCCCCchhhHHHHHHHHHCHHHHHHHHHHHHHHhhc
Confidence 96 7999999999999999999999999999999999999999999998543 66777777777664
No 40
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=100.00 E-value=3.5e-42 Score=241.38 Aligned_cols=118 Identities=28% Similarity=0.535 Sum_probs=105.6
Q ss_pred ChHHHHHHHHHHHHHHhcCCCCCCeEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeccc-cc
Q 031652 1 MQASRARLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKI-FH 79 (155)
Q Consensus 1 m~~a~~RL~~E~~~l~~~~~~~~~i~~~~~~~n~~~w~v~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i-~H 79 (155)
|+.|.+||++|++++++++ +.||++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++ ||
T Consensus 4 m~~a~~RL~kEl~~l~~~~--~~~~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~H 81 (125)
T 2fo3_A 4 MGNANYRIQKELHNFLNNP--PINCTLDVHPNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPKH 81 (125)
T ss_dssp -----CHHHHHHHHHHHSC--CTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCB
T ss_pred chHHHHHHHHHHHHHHhCC--CCCEEEEeCcchhhhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCCCC
Confidence 7889999999999999999 89999999899999999999999999999999999999999999999999999996 99
Q ss_pred CCccCCCCeEEccCCCCCCCCcCCHHHHHHHHHHHhcCCCCC
Q 031652 80 PNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPD 121 (155)
Q Consensus 80 Pni~~~~G~icl~~l~~~W~p~~~i~~iL~~i~~~l~~p~~~ 121 (155)
|||+ .+|.||+++|.++|+|++++++||.+|+++|.+|+.+
T Consensus 82 Pnv~-~~G~iCl~iL~~~W~P~~~i~~vl~si~~ll~~p~~~ 122 (125)
T 2fo3_A 82 THVY-SNGDICLSLLGDDYNPSLSISGLVLSIISMLSSAKEK 122 (125)
T ss_dssp TTBC-TTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHC-----
T ss_pred CcCC-CCCEEEchhcCCCCCCCCcHHHHHHHHHHHHhCcccc
Confidence 9996 8999999999999999999999999999999998754
No 41
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=100.00 E-value=2.2e-42 Score=254.07 Aligned_cols=138 Identities=28% Similarity=0.599 Sum_probs=123.8
Q ss_pred HHHHHHHHHHHHHhcCCCCCCeEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEecccccCCcc
Q 031652 4 SRARLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVH 83 (155)
Q Consensus 4 a~~RL~~E~~~l~~~~~~~~~i~~~~~~~n~~~w~v~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPni~ 83 (155)
|.+||++|++++++.+ . ++ . .++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 13 ~~~RL~~El~~l~~~~--~-~v--~-~~~~l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNi~ 86 (171)
T 1yf9_A 13 SNRRREMDYMRLCNST--R-KV--Y-PSDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILHPNVD 86 (171)
T ss_dssp CCHHHHHHHHHHHSSS--S-CE--E-ECSSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBC
T ss_pred HHHHHHHHHHHHHhCC--C-CC--C-CCCCceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCcccccCc
Confidence 4699999999999877 3 33 3 478999999999999999999999999999999999999999999999999997
Q ss_pred CCCCeEEccCCCCCCCCcCCHHHHHHHH-HHHhcCCCCCCCcchhhhhhHH-----HHHHHHHHHHHhcc
Q 031652 84 FKTGEICLDILKNAWSPAWTLQSVCRAI-IALMAHPEPDSPLNCDSGMWTL-----FWYRLVEFISRYYP 147 (155)
Q Consensus 84 ~~~G~icl~~l~~~W~p~~~i~~iL~~i-~~~l~~p~~~~p~n~e~a~~~~-----~~~~~~~~~~k~~~ 147 (155)
..+|.||+++|.++|+|+++|++||.+| +++|.+|++++|+|.+||+++. |.+.+++++++++.
T Consensus 87 ~~~G~iCl~iL~~~W~p~~~i~~vL~sil~~ll~~Pn~~~p~n~~aa~~~~~d~~~y~~~vr~~~~~~a~ 156 (171)
T 1yf9_A 87 ERSGSVCLDVINQTWTPMYQLENIFDVFLPQLLRYPNPSDPLNVQAAHLLHADRVGFDALLREHVSTHAT 156 (171)
T ss_dssp TTTCBBCHHHHHHHCCTTCCTHHHHHTHHHHHHHSCCSSCCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred ccCCeEeccccccCCCCCCcHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcC
Confidence 4599999999999999999999999997 7999999999999999998543 66777777776654
No 42
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=100.00 E-value=2.9e-41 Score=245.32 Aligned_cols=126 Identities=26% Similarity=0.470 Sum_probs=116.8
Q ss_pred HHHHHHHHHHHHHHhcCCCCCC-eEEEe-cCCC--cceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEecccc
Q 031652 3 ASRARLFKEYKEVQREKSADPD-IQLVC-DDSN--IFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIF 78 (155)
Q Consensus 3 ~a~~RL~~E~~~l~~~~~~~~~-i~~~~-~~~n--~~~w~v~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~ 78 (155)
.+.+||++|++++++++ ++| +++.+ +++| +++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|
T Consensus 25 p~~~RL~kEl~~l~~~~--~~g~~~~~~~~~~d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~ 102 (160)
T 2a4d_A 25 PRNFRLLEELEEGQKGV--GDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKIN 102 (160)
T ss_dssp HHHHHHHHHHHHHHSCC--TTSSEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCC
T ss_pred hHHHHHHHHHHHHHhCC--CCCcEEEEecCCccccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEecCce
Confidence 47799999999999988 777 77876 4554 899999999999999999999999999999999999999999999
Q ss_pred cCCccCCCCeEEccCCC--CCCCCcCCHHHHHHHHHHHhc-CCCCCCCcchhhhh
Q 031652 79 HPNVHFKTGEICLDILK--NAWSPAWTLQSVCRAIIALMA-HPEPDSPLNCDSGM 130 (155)
Q Consensus 79 HPni~~~~G~icl~~l~--~~W~p~~~i~~iL~~i~~~l~-~p~~~~p~n~e~a~ 130 (155)
||||+..+|.||+++|. ++|+|+++|++||.+|+++|. +||+++|+|.|||.
T Consensus 103 HPNV~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~~ll~~~pn~~~P~n~eaa~ 157 (160)
T 2a4d_A 103 MNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQC 157 (160)
T ss_dssp CTTBCTTTCBBCGGGSHHHHTCCTTCCHHHHHHHHHHHHTSTTTTTCCCCCTTCB
T ss_pred eCCEECCCCEEehhhcCCccCCCccCcHHHHHHHHHHHHccCCCCCCCCChhhcc
Confidence 99996579999999998 899999999999999999995 69999999999986
No 43
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=100.00 E-value=1.1e-41 Score=249.67 Aligned_cols=144 Identities=25% Similarity=0.515 Sum_probs=129.7
Q ss_pred Ch-HHHHHHHHHHHHHHhcC-------C---CCCCeEEEecCCCcceEEEEEECCCCCCCC--CcEEEEEEECCCCCCCC
Q 031652 1 MQ-ASRARLFKEYKEVQREK-------S---ADPDIQLVCDDSNIFKWTALIKGPSETPYE--GGVFQLAFAVPEQYPLQ 67 (155)
Q Consensus 1 m~-~a~~RL~~E~~~l~~~~-------~---~~~~i~~~~~~~n~~~w~v~i~gp~~t~y~--gg~f~~~i~fp~~YP~~ 67 (155)
|| .|.+||++|++++++++ . ...++.+.+.++|+++|+++|.||++|||+ ||.|+++|.||++||++
T Consensus 5 Ms~~a~kRL~kEl~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP~~ 84 (167)
T 4ds2_A 5 MKNISNKRIIKDLKLLLEEVDANNEANSSGSPHSTAIFSVDTDTIYNWILKVKAPADSVYGGAGNTYQLSVLFSDDYPHE 84 (167)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHTTC----CCSSCEEEEEEESSTTEEEEEEECCTTSGGGTTCCEEEEEEECCTTTTTS
T ss_pred ccHHHHHHHHHHHHHHHhCcccccccccccCCCCcEEEEeCCCcccEEEEEEECCCCCCccCCCCEEEEEEECCCCCCCC
Confidence 55 56799999999999875 1 156889999999999999999999999999 99999999999999999
Q ss_pred CCeEEEecccccCCccCCCCeEEccCCCCCCCCcCCHHHHHH-HHHHHhcC--CCCCCCcchhhhhhHHHHHHHHHHHHH
Q 031652 68 PPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCR-AIIALMAH--PEPDSPLNCDSGMWTLFWYRLVEFISR 144 (155)
Q Consensus 68 pP~i~f~t~i~HPni~~~~G~icl~~l~~~W~p~~~i~~iL~-~i~~~l~~--p~~~~p~n~e~a~~~~~~~~~~~~~~k 144 (155)
||+|+|.|++|||||+ .+|.||+++|.++|+|+++++++|+ .|++++.. |++++|+|.|||+ +|.++.++|.++
T Consensus 85 pP~v~f~t~i~HPnv~-~~G~iCl~il~~~W~p~~~i~~vll~~l~~l~~~~~pn~~~p~n~eaa~--l~~~d~~~f~~~ 161 (167)
T 4ds2_A 85 PPTVRFVTPVYSPLVT-GEGGICDRMVNDFWTPDQHASDVIKLVLDRVFSQYKSRRDDDVNPEARH--YLEKFPQDFAAR 161 (167)
T ss_dssp CCEEEESSCCCCSSCC-TTSCCCTHHHHTTCCTTSCHHHHHHHHHHHHHTSTTSCCSCCCCHHHHH--HHHHCHHHHHHH
T ss_pred CCEEEEeCCcccccCC-CCCEEEcccCcCCCCCCCChHHHHHHHHHHHHhcCCCCCcchHhHHHHH--HHHHCHHHHHHH
Confidence 9999999999999996 8999999999999999999999765 56777764 7999999999998 778899999988
Q ss_pred hcc
Q 031652 145 YYP 147 (155)
Q Consensus 145 ~~~ 147 (155)
+++
T Consensus 162 vrr 164 (167)
T 4ds2_A 162 VRR 164 (167)
T ss_dssp HTT
T ss_pred Hhh
Confidence 874
No 44
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=6.6e-41 Score=237.99 Aligned_cols=117 Identities=26% Similarity=0.537 Sum_probs=112.2
Q ss_pred ChHHHHHHHHHHHHHHhcCCCCCCeEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEeccc-cc
Q 031652 1 MQASRARLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKI-FH 79 (155)
Q Consensus 1 m~~a~~RL~~E~~~l~~~~~~~~~i~~~~~~~n~~~w~v~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i-~H 79 (155)
|+.|.+||++|++++++++ +.||++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++ ||
T Consensus 18 ~~~~~~RL~kEl~~l~~~~--~~~~~~~~~~~nl~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~H 95 (136)
T 2h2y_A 18 LGNANYRIQKELNNFLKNP--PINCTIDVHPSNIRIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKPPKH 95 (136)
T ss_dssp TTSHHHHHHHHHHHHHHSC--CTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCC
T ss_pred chHHHHHHHHHHHHHHhCC--CCCeEEEeccccccccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCCCCC
Confidence 5678999999999999999 89999999899999999999999999999999999999999999999999999996 99
Q ss_pred CCccCCCCeEEccCCCCCCCCcCCHHHHHHHHHHHhcCCCC
Q 031652 80 PNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120 (155)
Q Consensus 80 Pni~~~~G~icl~~l~~~W~p~~~i~~iL~~i~~~l~~p~~ 120 (155)
|||+ .+|.||+++|.++|+|+++|++||.+|+++|.+|+.
T Consensus 96 Pnv~-~~G~ICl~iL~~~WsP~~ti~~vL~si~sll~~p~~ 135 (136)
T 2h2y_A 96 THVY-SNGDICLSVLGDDYNPSLSISGLILSIISMLSSAKE 135 (136)
T ss_dssp TTBC-TTCCBCCGGGTTTCCTTCCHHHHHHHHHHHHSSSCC
T ss_pred CcCC-CCCEEECccccCCCCCCCcHHHHHHHHHHHHhCcCc
Confidence 9996 899999999999999999999999999999999874
No 45
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=100.00 E-value=7.5e-42 Score=243.44 Aligned_cols=128 Identities=26% Similarity=0.448 Sum_probs=114.2
Q ss_pred Ch--HHHHHHHHHHHHHHhc-CCCCCCeEEEecC-C--CcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEe
Q 031652 1 MQ--ASRARLFKEYKEVQRE-KSADPDIQLVCDD-S--NIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFL 74 (155)
Q Consensus 1 m~--~a~~RL~~E~~~l~~~-~~~~~~i~~~~~~-~--n~~~w~v~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~ 74 (155)
|+ .+.+||++|+++++++ + +.|+++.+.+ + |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.
T Consensus 2 m~~~~~~~RL~kEl~~l~~~~~--~~~~~~~~~~~~d~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~ 79 (138)
T 1jat_B 2 MSKVPRNFRLLEELEKGEKGFG--PESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFI 79 (138)
T ss_dssp -CCCCHHHHHHHHHHHHHC------CCEEEEESSTTCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEES
T ss_pred cchHHHHHHHHHHHHHHHhcCC--CCCEEEEeCCCCCCcceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEE
Confidence 55 4679999999999998 6 7899998743 3 599999999999999999999999999999999999999999
Q ss_pred cccccCCccCCCCeE--EccCCCCCCCCcCCHHHHHHHHHHHhcCCCCCCCcchhhhhh
Q 031652 75 TKIFHPNVHFKTGEI--CLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGMW 131 (155)
Q Consensus 75 t~i~HPni~~~~G~i--cl~~l~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~e~a~~ 131 (155)
|++|||||+..+|.| |++++. +|+|++++++||.+|+++|.+|++++|+|.+||..
T Consensus 80 t~i~HPnv~~~~G~i~~cL~~l~-~W~p~~~i~~vl~~i~~ll~~pn~~~p~~~~~~~~ 137 (138)
T 1jat_B 80 SKINLPCVNPTTGEVQTDFHTLR-DWKRAYTMETLLLDLRKEMATPANKKLRQPKEGET 137 (138)
T ss_dssp BCCCCTTBCTTTCBBCTTSHHHH-TCCTTCCHHHHHHHHHHHHTSHHHHTSCCCCTTCB
T ss_pred cccccCCEeCCCCEEeeecccCC-CCCCcCcHHHHHHHHHHHHcCCCCCCCCCcchhhc
Confidence 999999997445999 898885 89999999999999999999999999999999863
No 46
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=100.00 E-value=5.4e-41 Score=243.25 Aligned_cols=126 Identities=23% Similarity=0.406 Sum_probs=116.9
Q ss_pred HHHHHHHHHHHHHHhc-CCCCCCeEEEecC-C--CcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEecccc
Q 031652 3 ASRARLFKEYKEVQRE-KSADPDIQLVCDD-S--NIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIF 78 (155)
Q Consensus 3 ~a~~RL~~E~~~l~~~-~~~~~~i~~~~~~-~--n~~~w~v~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~ 78 (155)
.+.+||++|++++++. + ++||++.+.+ + |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|
T Consensus 21 ~~~~RL~kEl~~l~~~~~--~~~i~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~ 98 (156)
T 2q0v_A 21 PRSFRLLDELERGQKGNV--SEGVSFGLESADDITLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFDTKIE 98 (156)
T ss_dssp CHHHHHHHHHHHHHCC-C--CTTEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCC
T ss_pred hHHHHHHHHHHHHHhCCC--CCCeEEEECCCccccceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEEcccc
Confidence 5679999999999998 6 7899998743 3 5999999999999999999999999999999999999999999999
Q ss_pred cCCccCCCCeE---EccCCCCCCCCcCCHHHHHHHHHHHhcCCCCCCCcchhhhhhH
Q 031652 79 HPNVHFKTGEI---CLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGMWT 132 (155)
Q Consensus 79 HPni~~~~G~i---cl~~l~~~W~p~~~i~~iL~~i~~~l~~p~~~~p~n~e~a~~~ 132 (155)
||||+ .+|.| |+++|. +|+|+++|++||.+|+++|.+|++++|+|.+||+++
T Consensus 99 HPNV~-~~G~icisCL~iL~-~WsP~~ti~~vL~sI~~ll~~Pn~~~p~n~~aa~~y 153 (156)
T 2q0v_A 99 MSCVD-NCGRVIKNNLHILK-NWNRNYTIETILISLRQEMLSSANKRLPQPNEGEVY 153 (156)
T ss_dssp CTTBC-TTSBBCGGGSHHHH-TCCTTCCHHHHHHHHHHHTTSTTTTTCCCCCTTCBC
T ss_pred cCCCc-cCCeEehhhccccc-CCCCcCcHHHHHHHHHHHHhCCCCCCcCChHHHHHh
Confidence 99996 78999 888886 599999999999999999999999999999999843
No 47
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=100.00 E-value=1.3e-40 Score=244.20 Aligned_cols=126 Identities=26% Similarity=0.468 Sum_probs=116.6
Q ss_pred HHHHHHHHHHHHHHhcCCCCCC-eEEEe-cCCC--cceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEecccc
Q 031652 3 ASRARLFKEYKEVQREKSADPD-IQLVC-DDSN--IFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIF 78 (155)
Q Consensus 3 ~a~~RL~~E~~~l~~~~~~~~~-i~~~~-~~~n--~~~w~v~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~ 78 (155)
.+.+||++|++++++++ +.| +++.+ +++| +++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|
T Consensus 35 p~~~RL~kEl~~l~~~~--~~g~~~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~ 112 (170)
T 2hlw_A 35 PRNFRLLEELEEGQKGV--GDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKIN 112 (170)
T ss_dssp CHHHHHHHHHHHHHHCC--GGGCEEEEESSTTCSSCCBEEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEECBCCC
T ss_pred HHHHHHHHHHHHHHhCC--CCCcEEEEecCcccccceeeEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEecccc
Confidence 36899999999999988 777 67776 4554 999999999999999999999999999999999999999999999
Q ss_pred cCCccCCCCeEEccCCC--CCCCCcCCHHHHHHHHHHHhcC-CCCCCCcchhhhh
Q 031652 79 HPNVHFKTGEICLDILK--NAWSPAWTLQSVCRAIIALMAH-PEPDSPLNCDSGM 130 (155)
Q Consensus 79 HPni~~~~G~icl~~l~--~~W~p~~~i~~iL~~i~~~l~~-p~~~~p~n~e~a~ 130 (155)
||||+..+|.||+++|. ++|+|+++|++||.+|+++|.+ ||.++|+|.|||.
T Consensus 113 HPNV~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~~ll~~~pn~~~P~n~eaa~ 167 (170)
T 2hlw_A 113 MNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQC 167 (170)
T ss_dssp CSSBCSSSCBBCTTTCHHHHTCCSSCCHHHHHHHHHHHHHSTTTSSSCCCSSCCB
T ss_pred cCCEeCCCCEEEhhhcCCCCCCCccCcHHHHHHHHHHHHccCCCCCCCCCccccc
Confidence 99996579999999998 8999999999999999999974 8999999999985
No 48
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=6.1e-40 Score=232.81 Aligned_cols=113 Identities=39% Similarity=0.721 Sum_probs=107.0
Q ss_pred ChHHHHHHHHHHHHHHhcCCCCCCeEEE--ecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEecccc
Q 031652 1 MQASRARLFKEYKEVQREKSADPDIQLV--CDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIF 78 (155)
Q Consensus 1 m~~a~~RL~~E~~~l~~~~~~~~~i~~~--~~~~n~~~w~v~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~ 78 (155)
|+.+.+||++|++++++++ ++||++. +.++|+++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++|
T Consensus 20 Ms~~~~RL~kEl~~l~~~~--~~gi~v~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~ 97 (136)
T 2a7l_A 20 MASMQKRLQKELLALQNDP--PPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENI 97 (136)
T ss_dssp GTTSCHHHHHHHHHHHHSC--CTTCCCCTTCCCCSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESSCC
T ss_pred ccHHHHHHHHHHHHHHhCC--CCCEEEEEeeCccccceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCCCc
Confidence 6655699999999999999 8999965 78899999999999999999999999999999999999999999999998
Q ss_pred --cCCccCCCCeEEccCCCCCCCCcCCHHHHHHHHHHHhc
Q 031652 79 --HPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMA 116 (155)
Q Consensus 79 --HPni~~~~G~icl~~l~~~W~p~~~i~~iL~~i~~~l~ 116 (155)
||||+ .+|.||+++|.++|+|+++|++||.+|+++|.
T Consensus 98 ~~HPNV~-~~G~ICL~iL~~~WsP~~ti~~vL~sI~slL~ 136 (136)
T 2a7l_A 98 PVHPHVY-SNGHICLSILTEDWSPALSVQSVCLSIISMLS 136 (136)
T ss_dssp CCBTTBC-TTCBBCCGGGTTTCCTTSCHHHHHHHHHHHTC
T ss_pred CCCccCC-CCCeEEchhcCCCCCCCCcHHHHHHHHHHHhC
Confidence 99996 79999999999999999999999999999874
No 49
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=100.00 E-value=6.1e-38 Score=248.97 Aligned_cols=141 Identities=26% Similarity=0.476 Sum_probs=122.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCC----CeEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEecc--
Q 031652 3 ASRARLFKEYKEVQREKSADP----DIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTK-- 76 (155)
Q Consensus 3 ~a~~RL~~E~~~l~~~~~~~~----~i~~~~~~~n~~~w~v~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~-- 76 (155)
.+.+||++|+++|++++ ++ ++.+.+.++|++.|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+
T Consensus 76 ~~~kRL~kEl~~L~k~~--p~g~~~~i~v~~~ednl~~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~T~~g 153 (323)
T 3ceg_A 76 ARARRLAQEAVTLSTSL--PLSSSSSVFVRCDEERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLETTGG 153 (323)
T ss_dssp HHHHHHHHHHHHHHHHC--CCCSSCCEEEEEESSCTTEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEECCSTT
T ss_pred HHHHHHHHHHHHHHhCC--CCCcccceeecccCCCccccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEeccCC
Confidence 57799999999999987 55 45566788999999999999999999999999999999999999999999998
Q ss_pred ---cccCCccCCCCeEEccCCC-------CCCCCcC-CHHHHHHHHHHHhc--CCCCCCCcchhhh--hh-----HHHHH
Q 031652 77 ---IFHPNVHFKTGEICLDILK-------NAWSPAW-TLQSVCRAIIALMA--HPEPDSPLNCDSG--MW-----TLFWY 136 (155)
Q Consensus 77 ---i~HPni~~~~G~icl~~l~-------~~W~p~~-~i~~iL~~i~~~l~--~p~~~~p~n~e~a--~~-----~~~~~ 136 (155)
+|||||+ .+|.||+++|. ++|+|++ +|.+||.+|+++|. +|++++|+|.+++ .+ ..|.+
T Consensus 154 ~~~ifHPNV~-~~G~ICLsiL~~~~g~~~e~WsPa~stI~~VLlsIqsLL~~~~Pn~~dP~~~~a~a~~~~~~d~~~Y~~ 232 (323)
T 3ceg_A 154 HSVRFNPNLY-NDGKVCLSILNTWHGRPEEKWNPQTSSFLQVLVSVQSLILVAEPYFNEPGYERSRGTPSGTQSSREYDG 232 (323)
T ss_dssp TTCCCBTTBC-TTCBBCCGGGTSSCCCGGGSCCTTTCCHHHHHHHHHHHTSCSSGGGGSTTGGGGTTSHHHHHHHHHHHH
T ss_pred CcccccCCCC-cCCeEechhhccccCCCcCCCCcCcCCHHHHHHHHHHHHcCCCCCCCCccCHHHHHhhhhhhhHHHHHH
Confidence 9999996 89999999997 6899999 89999999999996 6777999999873 21 22555
Q ss_pred HHHHHHHHhc
Q 031652 137 RLVEFISRYY 146 (155)
Q Consensus 137 ~~~~~~~k~~ 146 (155)
.++++..+++
T Consensus 233 ~vr~~t~k~A 242 (323)
T 3ceg_A 233 NIRQATVKWA 242 (323)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 5666665554
No 50
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.7e-36 Score=225.52 Aligned_cols=115 Identities=27% Similarity=0.679 Sum_probs=103.1
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCeEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEecccccCCc
Q 031652 3 ASRARLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNV 82 (155)
Q Consensus 3 ~a~~RL~~E~~~l~~~~~~~~~i~~~~~~~n~~~w~v~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPni 82 (155)
.|.+||++|++++++++ ++||++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+ |||+
T Consensus 14 ~a~~RL~kEl~~l~~~~--~~~i~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T~--~~~~ 89 (187)
T 2f4w_A 14 TATQRLKQDYLRIKKDP--VPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGRF 89 (187)
T ss_dssp CHHHHHHHHHHHHHHSC--CTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC--CSSB
T ss_pred HHHHHHHHHHHHHHhCC--CCCEEEEEcCCccceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccCC--Ccee
Confidence 46799999999999999 8999999989999999999999999999999999999999999999999999998 9999
Q ss_pred cCCCCeEEccCC---CCCCCCcCCHHHHHHHHHHHhcCCCCCC
Q 031652 83 HFKTGEICLDIL---KNAWSPAWTLQSVCRAIIALMAHPEPDS 122 (155)
Q Consensus 83 ~~~~G~icl~~l---~~~W~p~~~i~~iL~~i~~~l~~p~~~~ 122 (155)
+ .+|.||+++| .++|+|+++|.+||.+|+++|.+|+++.
T Consensus 90 ~-~~G~ICL~iL~~~~~~W~P~~ti~~vL~si~sll~~p~p~~ 131 (187)
T 2f4w_A 90 K-CNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPTL 131 (187)
T ss_dssp C-TTSCBC----------CCTTCCHHHHHHHHHHHHHSCCCCT
T ss_pred c-cCCeEeeeccccCccCCCCcCcHHHHHHHHHHHhcCCCCCC
Confidence 6 7999999999 5899999999999999999999998764
No 51
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=100.00 E-value=1e-36 Score=226.45 Aligned_cols=118 Identities=22% Similarity=0.512 Sum_probs=108.5
Q ss_pred HHHHHHHHHHHHHHhcCC-CCCCeEEEecCCCcceEEEEEECC-CCCCCCC-----------cEEEEEEECCCCCCCCCC
Q 031652 3 ASRARLFKEYKEVQREKS-ADPDIQLVCDDSNIFKWTALIKGP-SETPYEG-----------GVFQLAFAVPEQYPLQPP 69 (155)
Q Consensus 3 ~a~~RL~~E~~~l~~~~~-~~~~i~~~~~~~n~~~w~v~i~gp-~~t~y~g-----------g~f~~~i~fp~~YP~~pP 69 (155)
.|.+||++|++++++++. .+.+|++.+.++|+++|+++|.|| ++|||+| |.|+++|.||++||++||
T Consensus 27 ~a~~RL~kEl~~l~~~~~~~~~~~~~~p~~dnl~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~~YP~~PP 106 (186)
T 1zuo_A 27 QASDRLMKELRDIYRSQSYKTGIYSVELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFPFDPP 106 (186)
T ss_dssp HHHHHHHHHHHHHHTSHHHHTTSEEEEEETTEEEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCTTTTSSCC
T ss_pred HHHHHHHHHHHHHHhCCCCCCCcEEEEEcCCccceeEEEEECCCCCCCccccchhhccccCceEEEEEEECCCCCCCCCC
Confidence 578999999999998761 036799998889999999999998 9999998 899999999999999999
Q ss_pred eEEEecccccC-CccCCCCeEEccCCC-CCCCCcCCHHHHHHHHHHHhcCCCCC
Q 031652 70 QVRFLTKIFHP-NVHFKTGEICLDILK-NAWSPAWTLQSVCRAIIALMAHPEPD 121 (155)
Q Consensus 70 ~i~f~t~i~HP-ni~~~~G~icl~~l~-~~W~p~~~i~~iL~~i~~~l~~p~~~ 121 (155)
+|+|.|++||| ||+ .+|.||+++|. ++|+|+++|++||.+|+++|.+|+..
T Consensus 107 ~V~f~tpi~hPnnV~-~~G~ICL~iL~~~~WsP~~ti~~VL~sI~slL~~p~a~ 159 (186)
T 1zuo_A 107 FVRVVLPVLSGGYVL-GGGALCMELLTKQGWSSAYSIESVIMQINATLVKGKAR 159 (186)
T ss_dssp EEEEEESCEESTTBC-GGGBBCCGGGSTTTCCTTSCHHHHHHHHHHHHHHTTCE
T ss_pred eEEEeCCccCCCccC-CCCcEEeccCCCCCCCCcCcHHHHHHHHHHHHcCCChh
Confidence 99999999999 696 89999999997 79999999999999999999998654
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.94 E-value=6.3e-28 Score=173.65 Aligned_cols=96 Identities=22% Similarity=0.358 Sum_probs=87.6
Q ss_pred HHHHHHHHHHHHhcCCCCCCeEEEecCCCcceEEEEEECCCCCCCCCc----------EEEEEEECCCCCCCCCCeEEEe
Q 031652 5 RARLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSETPYEGG----------VFQLAFAVPEQYPLQPPQVRFL 74 (155)
Q Consensus 5 ~~RL~~E~~~l~~~~~~~~~i~~~~~~~n~~~w~v~i~gp~~t~y~gg----------~f~~~i~fp~~YP~~pP~i~f~ 74 (155)
.+||++|++.+++.. .++.+|++.|.+.+.||+||+|+|| .|++++.||++||.+||+|+|.
T Consensus 34 ~~RL~eE~k~L~k~v--------~p~k~n~~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV~F~ 105 (172)
T 2z6o_A 34 VQRLKEEYQSLIRYV--------ENNKNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIAVP 105 (172)
T ss_dssp HHHHHHHHHHHHHHH--------HHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCG
T ss_pred HHHHHHHHHHHHHHh--------ccCccccceeEEeecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCCeeeeC
Confidence 799999999999843 5567899999999999999999999 9999999999999999999999
Q ss_pred cc-cccCCccCCCCeEEccCCC-C---CCCCcCCHHHHHH
Q 031652 75 TK-IFHPNVHFKTGEICLDILK-N---AWSPAWTLQSVCR 109 (155)
Q Consensus 75 t~-i~HPni~~~~G~icl~~l~-~---~W~p~~~i~~iL~ 109 (155)
+. +||||| |.+|+||||++. . .|+|.++|..+|.
T Consensus 106 ~~~~~hpnm-Y~~G~ICLdIL~kp~Ws~~~P~~~IahiL~ 144 (172)
T 2z6o_A 106 ELDGKTAKM-YRGGKICLTDHFKPLWARNVPKFGLAHLMA 144 (172)
T ss_dssp GGTTTCSSB-CTTSBBCCCTTHHHHHHHHTTSCCHHHHHH
T ss_pred CCCCCCCCC-CCCCcEechhhccccccccCCccCHHHHHh
Confidence 98 999999 589999999995 3 5669999999983
No 53
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.80 E-value=2.5e-19 Score=129.65 Aligned_cols=115 Identities=23% Similarity=0.400 Sum_probs=93.2
Q ss_pred HHHHHHHHHHHhcCC-CCCCeEEEecCCCcceEEEEEECCCCCCCCCcE---EEEEEECCCCCCCCCCeEEEecc-----
Q 031652 6 ARLFKEYKEVQREKS-ADPDIQLVCDDSNIFKWTALIKGPSETPYEGGV---FQLAFAVPEQYPLQPPQVRFLTK----- 76 (155)
Q Consensus 6 ~RL~~E~~~l~~~~~-~~~~i~~~~~~~n~~~w~v~i~gp~~t~y~gg~---f~~~i~fp~~YP~~pP~i~f~t~----- 76 (155)
+|..+|..++.+.-. ..+...+...++...++-+.+.|.-..+|+|+. |.+.|.||.+||++||.|.|.++
T Consensus 31 ~~~~~dv~~~l~~yp~L~p~t~~yt~~dG~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~m~ 110 (162)
T 3r3q_A 31 RTTFHDSLALLDNFHSLRPRTRVFTHSDGTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFDMN 110 (162)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEEEEECTTSCEEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGCCTT
T ss_pred hHHHHHHHHHHHhCCCCceeeeeEEcCCCChheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCCcccc
Confidence 677788888765441 122223335567777788888888779999998 88999999999999999988551
Q ss_pred -----cc-cCCccCCCCeEEccCCCCCCCC-cCCHHHHHHHHHHHhcCCCCCC
Q 031652 77 -----IF-HPNVHFKTGEICLDILKNAWSP-AWTLQSVCRAIIALMAHPEPDS 122 (155)
Q Consensus 77 -----i~-HPni~~~~G~icl~~l~~~W~p-~~~i~~iL~~i~~~l~~p~~~~ 122 (155)
++ ||||| .+|+||+++| ++|+| +.++.++|.+|+++|.+|+++.
T Consensus 111 ~~~~~I~~hpnVD-~~G~I~lpyL-~~W~p~~s~L~~ll~~l~~lf~ep~~d~ 161 (162)
T 3r3q_A 111 TISSSLPIQEYID-SNGWIALPIL-HAWDPAAMNLIMVVQELMSLLHEPPQDQ 161 (162)
T ss_dssp TSCTTSTHHHHBC-TTSBBCCGGG-GSCCGGGCCHHHHHHHHHHTTSCCCCCC
T ss_pred ccccccCCCCCCC-CCCcEeCccc-ccCCCCcCcHHHHHHHHHHHhcCCCCCC
Confidence 77 99997 8999999999 46999 6899999999999999999875
No 54
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.74 E-value=5.2e-19 Score=124.70 Aligned_cols=92 Identities=24% Similarity=0.475 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHHhcCCCCCCeEEEecCCCcceEEEEEECCCCCCCCCc----------EEEEEEECCCCCCCCCCeEEEe
Q 031652 5 RARLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSETPYEGG----------VFQLAFAVPEQYPLQPPQVRFL 74 (155)
Q Consensus 5 ~~RL~~E~~~l~~~~~~~~~i~~~~~~~n~~~w~v~i~gp~~t~y~gg----------~f~~~i~fp~~YP~~pP~i~f~ 74 (155)
.+||+.||..|.+.. +.++.+-..|.....|++||+|.|+ .|++++.||.+||.+||+|+|.
T Consensus 36 ~~RlkeEy~alI~yv--------~~nK~~d~dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI~Fp 107 (168)
T 3kpa_A 36 TARLKEEYASLITYV--------EHNKASDSHWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEIALP 107 (168)
T ss_dssp HHHHHHHHHHHHHHH--------HHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCG
T ss_pred HHHHHHHHHHHHHHH--------HhcccccCCeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEeecc
Confidence 489999999988776 3344566789999999999999999 8999999999999999999999
Q ss_pred cc-cccCCccCCCCeEEccCCCCCCCC-------cCCHHHHH
Q 031652 75 TK-IFHPNVHFKTGEICLDILKNAWSP-------AWTLQSVC 108 (155)
Q Consensus 75 t~-i~HPni~~~~G~icl~~l~~~W~p-------~~~i~~iL 108 (155)
+. .+|||+ |.+|+|||+++ |+| .++|...|
T Consensus 108 ~ldgkt~km-Yr~GkICLdIh---wkPlW~~n~P~fGiahal 145 (168)
T 3kpa_A 108 ELEGKTVKM-YRGGKICMTTH---FFPLWARNVPYFGISHVL 145 (168)
T ss_dssp GGTTTCSSE-ETTTEECCCTT---HHHHHHHTTTTCCHHHHH
T ss_pred cccCcCccc-cCCCcEEeccc---cchhhHhcCCchhHHHHH
Confidence 95 899999 59999999997 655 55666554
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=99.46 E-value=9.7e-14 Score=98.75 Aligned_cols=103 Identities=21% Similarity=0.393 Sum_probs=79.6
Q ss_pred HHHHHHHHHHhcCCCCCCeEEE---ecCCCcceEEEEEECCCCCCCCCcEEE--EEEECCCCCCCCCCeEEEecc-----
Q 031652 7 RLFKEYKEVQREKSADPDIQLV---CDDSNIFKWTALIKGPSETPYEGGVFQ--LAFAVPEQYPLQPPQVRFLTK----- 76 (155)
Q Consensus 7 RL~~E~~~l~~~~~~~~~i~~~---~~~~n~~~w~v~i~gp~~t~y~gg~f~--~~i~fp~~YP~~pP~i~f~t~----- 76 (155)
+..+|...+.+.-. .-..... -...+++.|.++|. .+|+|+.|. +.|.||++||++||.+ |.++
T Consensus 24 ~t~~dv~~vl~~yp-~L~p~~~~y~G~~~~LL~l~GtIp----v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~ 97 (146)
T 3obq_A 24 LTVRETVNVITLYK-DLKPVLDSYGTGSRELMNLTGTIP----VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMT 97 (146)
T ss_dssp HHHHHHHHHHHHCT-TEEEEEEESSSTTCEEEEEEEEEE----EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEE
T ss_pred hhHHHHHHHHHhCC-CCceEeeeeeCChheEEEEEEEee----eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCE
Confidence 44567777655441 1111222 12358899999987 569999988 5999999999999999 6655
Q ss_pred -cccCCccCCCCeEEccCCCCCCCC-cCCHHHHHHHHHHHhcC
Q 031652 77 -IFHPNVHFKTGEICLDILKNAWSP-AWTLQSVCRAIIALMAH 117 (155)
Q Consensus 77 -i~HPni~~~~G~icl~~l~~~W~p-~~~i~~iL~~i~~~l~~ 117 (155)
..||||| .+|+||++.|.+ |++ ..++.+++..+++.|.+
T Consensus 98 I~~~~~Vd-~~G~i~lpyL~~-W~~~~snL~~ll~~l~~~F~~ 138 (146)
T 3obq_A 98 IKTGKHVD-ANGKIYLPYLHE-WKHPQSDLLGLIQVMIVVFGD 138 (146)
T ss_dssp ECCBTTBC-TTCBBCCHHHHT-CCTTTCCHHHHHHHHHHHHHH
T ss_pred ECCCCCCC-CCCCEecccccc-cCCCCCCHHHHHHHHHHHHhh
Confidence 4899997 899999999955 987 78999999999999875
No 56
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.85 E-value=0.0085 Score=40.69 Aligned_cols=68 Identities=15% Similarity=0.181 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHhcCCCCCCeEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEec
Q 031652 4 SRARLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLT 75 (155)
Q Consensus 4 a~~RL~~E~~~l~~~~~~~~~i~~~~~~~n~~~w~v~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t 75 (155)
...+...|+..|...- ...+.+. ......+.+.+....+..-..-.+.+.|.||++||..||.+.+.+
T Consensus 11 ~~e~q~~EleaL~sIy--~d~~~~~--~~~~~~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 78 (128)
T 2ebm_A 11 YGEEQRNELEALESIY--PDSFTVL--SENPPSFTITVTSEAGENDETVQTTLKFTYSEKYPDEAPLYEIFS 78 (128)
T ss_dssp HHHHHHHHHHHHHHHC--SSSEEEC--CSSSCEEEECCBCCCCTTSCCCBEEEEEECCSSTTTSCCEEEEEE
T ss_pred hHHHHHHHHHHHHHHc--cCceEEc--cCCCCEEEEEEecCCCCCcCceeEEEEEEeCCCCCCCCceEEEEc
Confidence 4566778888888776 4445443 223456666665222222233478899999999999999998755
No 57
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=96.25 E-value=0.04 Score=37.83 Aligned_cols=67 Identities=13% Similarity=0.222 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHhcCCCCCCeEEEecC------CCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEec
Q 031652 6 ARLFKEYKEVQREKSADPDIQLVCDD------SNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLT 75 (155)
Q Consensus 6 ~RL~~E~~~l~~~~~~~~~i~~~~~~------~n~~~w~v~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t 75 (155)
.+-..|+..|.-.- ...+.+.... +....+.+.+.+..+ .-..-.+.+.+.+|++||..||.|.+.+
T Consensus 13 e~q~~EleaL~SIY--~d~~~~~~~~~~~~~~~~~~~f~I~l~~~~~-~~~~~~~~L~~~~p~~YP~~~P~i~l~~ 85 (138)
T 2yz0_A 13 EIQCNELEAIRSIY--MDDFTDLTKRKSSWDKQPQIIFEITLRSVDK-EPVESSITLHFAMTPMYPYTAPEIEFKN 85 (138)
T ss_dssp HHHHHHHHHHHTTS--SSSEECCSTTSSSSCSSCCSCEEEEEECSSC-SSCCCEEEEEEECCSSTTSSCCEEEEEC
T ss_pred HHHHHHHHHHHHHC--hhhheecccccccccCCCCcEEEEEEecCCC-CCCceEEEEEEECCCCCCCCCCeEEEec
Confidence 44566777777654 3333322111 134667777773222 2123478899999999999999998865
No 58
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=95.84 E-value=0.12 Score=37.60 Aligned_cols=84 Identities=19% Similarity=0.304 Sum_probs=58.7
Q ss_pred HHHHHHHHHHhcCCCCCCeEEEecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEecccccCCccCCC
Q 031652 7 RLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKT 86 (155)
Q Consensus 7 RL~~E~~~l~~~~~~~~~i~~~~~~~n~~~w~v~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~i~HPni~~~~ 86 (155)
+|.+|+.++-=+. +.-.++++....+.+.... |..+.++|.++.+||.++|.+...-|. ..++
T Consensus 5 ~li~Ei~~iGW~~-------l~~id~~~~~i~l~~~D~~-----gR~H~l~v~l~~~yp~~~P~~~~DlP~-~~~~---- 67 (186)
T 3zqs_A 5 SLIEEIGTLGWDK-------LVYADTCFSTIKLKAEDAS-----GREHLITLKLKAKYPAESPDYFVDFPV-PFCA---- 67 (186)
T ss_dssp SHHHHHHHHCGGG-------EEEECTTSSEEEEEEECTT-----SCEEEEEEECCTTTTTSCCEEECCCSS-CCCC----
T ss_pred HHHHHHHHhCCce-------eeeecCCccEEEEEEEeCC-----CCeEEEEEEECCCCCCCCCeeEEcCCC-Cccc----
Confidence 5677777764333 2223567888888887443 568899999999999999987654432 1122
Q ss_pred CeEEccCCCCCCCCcCCHHHHHHHHHHHhcC
Q 031652 87 GEICLDILKNAWSPAWTLQSVCRAIIALMAH 117 (155)
Q Consensus 87 G~icl~~l~~~W~p~~~i~~iL~~i~~~l~~ 117 (155)
.|.+..++.+++.+.+..+.+
T Consensus 68 ----------~w~~~ssL~~v~~qF~~~Le~ 88 (186)
T 3zqs_A 68 ----------SWTPQSSLISIYSQFLAAIES 88 (186)
T ss_dssp ----------CCCTTCCHHHHHHHHHHHHHH
T ss_pred ----------ccCCCccHHHHHHHHHHHHHH
Confidence 499999999998877766643
No 59
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=95.75 E-value=0.1 Score=35.21 Aligned_cols=68 Identities=16% Similarity=0.240 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHhcCCCCCCeEEEecC--CCcceEEEEEECCCCCCC--CCcEEEEEEECCCCCCCCCCeEEEec
Q 031652 6 ARLFKEYKEVQREKSADPDIQLVCDD--SNIFKWTALIKGPSETPY--EGGVFQLAFAVPEQYPLQPPQVRFLT 75 (155)
Q Consensus 6 ~RL~~E~~~l~~~~~~~~~i~~~~~~--~n~~~w~v~i~gp~~t~y--~gg~f~~~i~fp~~YP~~pP~i~f~t 75 (155)
.+...|+..|+-.- ...+.+.... .....+.+.+..+.+..- ..-.+.+.|.||++||..+|.|...+
T Consensus 11 e~~~~EleaL~SIY--~de~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~~~~ 82 (128)
T 2day_A 11 WVLPSEVEVLESIY--LDELQVIKGNGRTSPWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRN 82 (128)
T ss_dssp CHHHHHHHHHHHHS--TTTEEEECCTTSSCCEEEEEEECCSCCSSSSCCCCEEEEEEEECSSTTSSCCEEEEEE
T ss_pred HHHHHHHHHHHHHC--CCceEEecCCCCCCCeEEEEEEecCCCCCccccceeEEEEEEcCCCCCCCCCCeEEEc
Confidence 45677888888776 4456554222 234455555552222111 12478899999999999999998876
No 60
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=94.66 E-value=0.27 Score=33.39 Aligned_cols=68 Identities=16% Similarity=0.167 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHhcCCCCCCeEEEecCC-----CcceEEEEEECCCC-C-CCCCcEEEEEEECCCCCCCCCCeEEEec
Q 031652 5 RARLFKEYKEVQREKSADPDIQLVCDDS-----NIFKWTALIKGPSE-T-PYEGGVFQLAFAVPEQYPLQPPQVRFLT 75 (155)
Q Consensus 5 ~~RL~~E~~~l~~~~~~~~~i~~~~~~~-----n~~~w~v~i~gp~~-t-~y~gg~f~~~i~fp~~YP~~pP~i~f~t 75 (155)
..+...|+..|+-.- ...+....... ....+.+.+. +.+ . .-..-.+.+.|.||++||..+|.|.+.+
T Consensus 12 ~e~q~~EleaL~SIY--~d~~~~~~~~~~~~~~~~~~~~i~l~-~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 86 (137)
T 1ukx_A 12 SQRQDHELQALEAIY--GSDFQDLRPDARGRVREPPEINLVLY-PQGLAGEEVYVQVELRVKCPPTYPDVVPEIDLKN 86 (137)
T ss_dssp HHHHHHHHHHHHHHT--SSSEEECCCCCSSSCCCCCCEEEEEC-CTTSCSSSCSCEEEEEECCCTTTTSSCCCCEEEE
T ss_pred HHHHHHHHHHHHHHC--cccceeccCcccCccCCCcEEEEEEe-cCCcCCcccceEEEEEEECCCCCCCCCCcEEEec
Confidence 455677888887666 33454432111 1345666665 322 1 0012468999999999999999998854
No 61
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.58 E-value=0.14 Score=34.50 Aligned_cols=67 Identities=12% Similarity=0.123 Sum_probs=39.5
Q ss_pred HHHHHHHHHHhcCCCCCCeEEE-ecCCCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEe
Q 031652 7 RLFKEYKEVQREKSADPDIQLV-CDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFL 74 (155)
Q Consensus 7 RL~~E~~~l~~~~~~~~~i~~~-~~~~n~~~w~v~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~ 74 (155)
+...|+..|.-.-..+..+.+. ....+...+.+.+.. .+..-..-.+.+.|.+|.+||..||.|...
T Consensus 11 ~q~~EleaL~SIy~d~~e~~~~~~~~~~~~~f~i~l~~-~~~~~~~~~~~L~~~~p~~YP~~~P~i~l~ 78 (128)
T 2ebk_A 11 PVQEELSVLAAIFCRPHEWEVLSRSETDGTVFRIHTKA-EGFMDADIPLELVFHLPVNYPSCLPGISIN 78 (128)
T ss_dssp HHHHHHHHHHHHHCCTTTCCCSEECSSSCEEEEEEEEC-CTTTTCCCEEEEEEEECSSTTSSCCCCCCC
T ss_pred HHHHHHHHHHHHcCCCCceEEecCCCCCCCeEEEEecC-CCCCCCCeEEEEEEECCCCCCCCCCeEEEE
Confidence 4556777776554111133332 112234577777763 221111247899999999999999998654
No 62
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=91.33 E-value=0.34 Score=33.94 Aligned_cols=23 Identities=22% Similarity=0.316 Sum_probs=21.2
Q ss_pred EEEEEEECCCCCCCCCCeEEEec
Q 031652 53 VFQLAFAVPEQYPLQPPQVRFLT 75 (155)
Q Consensus 53 ~f~~~i~fp~~YP~~pP~i~f~t 75 (155)
.+.++|.+|.+||..+|.|...+
T Consensus 76 ~i~L~v~lP~~YP~~~P~i~l~~ 98 (154)
T 2daw_A 76 KIDLQVTMPHSYPYLALQLFGRS 98 (154)
T ss_dssp EEEEEEEECSSTTSSCCEEEEEC
T ss_pred eEEEEEEcCCCCCCCCCcEEEEe
Confidence 78999999999999999998765
No 63
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=90.17 E-value=0.18 Score=35.12 Aligned_cols=24 Identities=29% Similarity=0.599 Sum_probs=21.2
Q ss_pred cEEEEEEECCCCCCCCCCeEEEec
Q 031652 52 GVFQLAFAVPEQYPLQPPQVRFLT 75 (155)
Q Consensus 52 g~f~~~i~fp~~YP~~pP~i~f~t 75 (155)
-.+.+.|.+|.+||..||.|...+
T Consensus 73 ~~l~L~v~lP~~YP~~~P~i~l~~ 96 (152)
T 2dax_A 73 AMFSLACILPFKYPAVLPEITVRS 96 (152)
T ss_dssp EEEEEEEEECSSTTSSCCCCEEEC
T ss_pred ceEEEEEECCCCCCCCCCeEEEEc
Confidence 368899999999999999998765
No 64
>3rls_A YAF9, protein AF-9 homolog; yeats domain, histone, transcription; 1.70A {Saccharomyces cerevisiae} PDB: 3fk3_A
Probab=54.50 E-value=39 Score=24.07 Aligned_cols=43 Identities=19% Similarity=0.426 Sum_probs=32.5
Q ss_pred CCcceEEEEEECCCCCCCCCcEEEEEEECCCCCCCCCCeEEEecc
Q 031652 32 SNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTK 76 (155)
Q Consensus 32 ~n~~~w~v~i~gp~~t~y~gg~f~~~i~fp~~YP~~pP~i~f~t~ 76 (155)
+.-.+|.|.+.|+.+.-...-+=++.+.|.+.||. |...+..+
T Consensus 30 ~~TH~WtVyVr~~~~edis~~v~KV~F~LHpSF~n--p~Rvv~~P 72 (175)
T 3rls_A 30 EHTHLWTIFVRGPQNEDISYFIKKVVFKLHDTYPN--PVRSIEAP 72 (175)
T ss_dssp TCCEEEEEEEECGGGCCCTTTEEEEEEECCTTSSS--CEEEECSS
T ss_pred CCcEEEEEEEECCCCCChhheEEEEEEEcCCCCCC--CcEEEeCC
Confidence 45678999999987655555577899999999975 66666554
No 65
>3qrl_A Transcription initiation factor TFIID subunit 14; yeats domain, IG fold, nucleus, nuclear protein; HET: PGE; 1.70A {Saccharomyces cerevisiae} PDB: 2l7e_A
Probab=46.49 E-value=56 Score=22.37 Aligned_cols=43 Identities=9% Similarity=0.242 Sum_probs=32.6
Q ss_pred cceEE--EEEECCCCCCCC-CcEEEEEEECCCCCCCCCCeEEEecccc
Q 031652 34 IFKWT--ALIKGPSETPYE-GGVFQLAFAVPEQYPLQPPQVRFLTKIF 78 (155)
Q Consensus 34 ~~~w~--v~i~gp~~t~y~-gg~f~~~i~fp~~YP~~pP~i~f~t~i~ 78 (155)
...|. |.+.|++|.... .-.=++.+.+.+.|+. |...+..+.|
T Consensus 32 ~h~WtieV~vr~~~g~ei~~~~i~kV~f~LH~sF~n--p~r~v~~pPF 77 (140)
T 3qrl_A 32 VRQWSIEIVLLDDEGKEIPATIFDKVIYHLHPTFAN--PNRTFTDPPF 77 (140)
T ss_dssp CEEEEEEEEEECTTSCEECCTTEEEEEEECCTTSSS--CEEEECSTTC
T ss_pred ccEeeEEEEEeCCCCCcCchheEEEEEEEeCCCCCC--CeEEEcCCCc
Confidence 36898 899999888664 4566788889999874 8877776544
No 66
>3u3c_B Paxillin LD2 peptide; 4-helix bundle, focal adhesion, tyrosine kinase, transferase-signaling protein complex; 3.70A {Homo sapiens}
Probab=40.64 E-value=23 Score=16.48 Aligned_cols=20 Identities=25% Similarity=0.273 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHHhcCCCCCCe
Q 031652 4 SRARLFKEYKEVQREKSADPDI 25 (155)
Q Consensus 4 a~~RL~~E~~~l~~~~~~~~~i 25 (155)
-..||.-|+...+.++ ++|.
T Consensus 6 eldrlllelnavqhnp--psg~ 25 (26)
T 3u3c_B 6 ELDRLLLELNAVQHNP--PSGX 25 (26)
T ss_pred HHHHHHHHHhhhccCC--CCCC
Confidence 4579999999999888 6653
No 67
>2kmf_A Photosystem II 11 kDa protein; PSB27, structure, helical bundle, cyanobacteria, photosynthesis; NMR {Synechocystis SP} PDB: 2knd_A
Probab=36.31 E-value=46 Score=22.02 Aligned_cols=47 Identities=19% Similarity=0.228 Sum_probs=32.1
Q ss_pred CHHHHHHHHHHHhcCCCCCCCcchhhhhhHHHHHHHHHHHHHhccc-cccc
Q 031652 103 TLQSVCRAIIALMAHPEPDSPLNCDSGMWTLFWYRLVEFISRYYPS-VIMG 152 (155)
Q Consensus 103 ~i~~iL~~i~~~l~~p~~~~p~n~e~a~~~~~~~~~~~~~~k~~~~-v~~~ 152 (155)
.-..|+..|+..+..|. ++|--.++.. ..++.+.+|+.++++. -+.|
T Consensus 19 dT~~Vv~~lr~~l~l~~-d~~~~~~a~~--~ar~~ind~vsrYRr~~~v~g 66 (115)
T 2kmf_A 19 DTLTVIATLREAIDLPQ-DAPNRQEVQD--TARGQINDYISRYRRKGDAGG 66 (115)
T ss_dssp HHHHHHHHHHHHHHSCT-TCTTHHHHHH--HHHHHHHHHHHHTHHHHCSSS
T ss_pred HHHHHHHHHHHHHcCCC-CCccHHHHHH--HHHHHHHHHHHHhcCCCCccc
Confidence 35567788888877653 4555555533 6778999999999865 4433
No 68
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=33.22 E-value=42 Score=24.49 Aligned_cols=25 Identities=20% Similarity=0.452 Sum_probs=22.0
Q ss_pred CCcEEEEEEECCCCCCC-----CCCeEEEe
Q 031652 50 EGGVFQLAFAVPEQYPL-----QPPQVRFL 74 (155)
Q Consensus 50 ~gg~f~~~i~fp~~YP~-----~pP~i~f~ 74 (155)
+.|.|.|+=++|--||. .||.|.|.
T Consensus 109 ~~G~y~F~TI~Pg~yp~~~G~~R~~HIH~~ 138 (209)
T 2bum_A 109 GTGFWSFNTIKPGAVPGRKGSTQAPHISLI 138 (209)
T ss_dssp TTCCEEEEEECCCCCBCSTTCBCCCCEEEE
T ss_pred CCcEEEEEEEccCcccCCCCCccCcEEEEE
Confidence 46889999999999998 79999885
No 69
>3g9r_A Fusion complex of HIV-1 envelope glycoprotein and saccharomyces cerevisiae general...; GP41, MPER, membrane fusion, AIDS; 2.00A {Human immunodeficiency virus 1}
Probab=32.82 E-value=24 Score=18.72 Aligned_cols=16 Identities=19% Similarity=0.380 Sum_probs=12.5
Q ss_pred ChHHHHHHHHHHHHHH
Q 031652 1 MQASRARLFKEYKEVQ 16 (155)
Q Consensus 1 m~~a~~RL~~E~~~l~ 16 (155)
|-+..+||..|++.+.
T Consensus 26 Mv~~~~~~~~~~~~~~ 41 (42)
T 3g9r_A 26 LKSKIKRIENEIKRIK 41 (42)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc
Confidence 4466799999998875
No 70
>2y6x_A PSB27, photosystem II 11 KD protein; photosynthesis; 1.60A {Thermosynechococcus elongatus}
Probab=31.76 E-value=58 Score=21.43 Aligned_cols=42 Identities=17% Similarity=0.238 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHhcCCCCCCCcchhhhhhHHHHHHHHHHHHHhccc
Q 031652 104 LQSVCRAIIALMAHPEPDSPLNCDSGMWTLFWYRLVEFISRYYPS 148 (155)
Q Consensus 104 i~~iL~~i~~~l~~p~~~~p~n~e~a~~~~~~~~~~~~~~k~~~~ 148 (155)
-..|+..|+..+.-|. ++|--.++. ...++.+.+|+.++++.
T Consensus 16 T~~Vv~~lr~~l~l~~-d~~~~~~a~--~~ar~~ind~vsrYRr~ 57 (113)
T 2y6x_A 16 TLALISSLREAIALPE-NDPNKKAAQ--AEARKKLNDFFALYRRD 57 (113)
T ss_dssp HHHHHHHHHHHHHSCT-TCTTHHHHH--HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCCC-CCccHHHHH--HHHHHHHHHHHHHhcCC
Confidence 4567788888877663 555555553 36778999999999975
Done!