Your job contains 1 sequence.
>031654
MSASWAADSVFASENAAPASSSTNTLSSPAARFAYVPQHLRNKPRTYKYVKPTPVQRHAT
SILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYYSARKELRELARWVDNLMATLRRLV
NLLERGRVSLQMIIRYLALKEAADQTLDMALNQKK
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 031654
(155 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
DICTYBASE|DDB_G0283661 - symbol:ddx3 "DEAD/DEAH box helic... 157 2.4e-21 3
RGD|1564771 - symbol:Ddx3x "DEAD (Asp-Glu-Ala-Asp) box po... 138 1.2e-19 3
FB|FBgn0263231 - symbol:bel "belle" species:7227 "Drosoph... 158 2.1e-19 3
UNIPROTKB|G5E631 - symbol:DDX3X "Uncharacterized protein"... 138 3.0e-19 3
UNIPROTKB|F1RX16 - symbol:DDX3X "Uncharacterized protein"... 138 3.0e-19 3
UNIPROTKB|J9P0V9 - symbol:DDX3X "Uncharacterized protein"... 138 3.0e-19 3
UNIPROTKB|O00571 - symbol:DDX3X "ATP-dependent RNA helica... 138 3.0e-19 3
MGI|MGI:103064 - symbol:Ddx3x "DEAD/H (Asp-Glu-Ala-Asp/Hi... 138 3.0e-19 3
UNIPROTKB|E2RRQ7 - symbol:DDX3X "Uncharacterized protein"... 138 3.9e-19 3
ASPGD|ASPL0000077157 - symbol:AN10557 species:162425 "Eme... 155 4.4e-19 2
UNIPROTKB|B4DXX7 - symbol:DDX3Y "Uncharacterized protein"... 141 7.2e-19 3
UNIPROTKB|O15523 - symbol:DDX3Y "ATP-dependent RNA helica... 141 7.4e-19 3
RGD|1309586 - symbol:RGD1309586 "similar to probable ATP-... 137 7.6e-19 3
UNIPROTKB|F1NIX1 - symbol:DDX3X "Uncharacterized protein"... 138 8.3e-19 3
UNIPROTKB|D3IVZ2 - symbol:DDX3Y "Uncharacterized protein"... 141 9.4e-19 3
UNIPROTKB|F1NIX2 - symbol:DDX3X "Uncharacterized protein"... 137 1.1e-18 3
UNIPROTKB|I3LDV0 - symbol:DDX3Y "Uncharacterized protein"... 140 1.3e-18 3
MGI|MGI:1349406 - symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) bo... 141 1.9e-18 3
MGI|MGI:91842 - symbol:D1Pas1 "DNA segment, Chr 1, Pasteu... 137 2.0e-18 3
RGD|2314437 - symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box po... 133 1.3e-17 3
CGD|CAL0004832 - symbol:orf19.7392 species:5476 "Candida ... 151 1.3e-17 2
SGD|S000005730 - symbol:DED1 "ATP-dependent DEAD (Asp-Glu... 145 1.6e-17 2
ZFIN|ZDB-GENE-030131-1565 - symbol:ddx3 "DEAD (Asp-Glu-Al... 134 1.8e-17 3
ZFIN|ZDB-GENE-980526-150 - symbol:pl10 "pl10" species:795... 138 1.9e-17 3
SGD|S000006040 - symbol:DBP1 "Putative ATP-dependent RNA ... 145 2.8e-17 2
TAIR|locus:2041549 - symbol:AT2G42520 species:3702 "Arabi... 213 2.0e-16 1
TAIR|locus:2076436 - symbol:AT3G58570 species:3702 "Arabi... 207 9.4e-16 1
TAIR|locus:2076351 - symbol:AT3G58510 species:3702 "Arabi... 203 2.3e-15 1
WB|WBGene00006888 - symbol:vbh-1 species:6239 "Caenorhabd... 143 2.8e-14 2
UNIPROTKB|C9J081 - symbol:DDX3Y "ATP-dependent RNA helica... 138 1.1e-12 2
ZFIN|ZDB-GENE-990415-272 - symbol:vasa "vasa homolog" spe... 165 3.6e-11 1
UNIPROTKB|Q91372 - symbol:ddx4 "Probable ATP-dependent RN... 164 4.4e-11 1
UNIPROTKB|H0Y960 - symbol:DDX4 "Probable ATP-dependent RN... 157 4.7e-11 1
UNIPROTKB|D4ADV9 - symbol:Ddx4 "Probable ATP-dependent RN... 162 6.8e-11 1
MGI|MGI:102670 - symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box ... 162 7.3e-11 1
UNIPROTKB|F1SLL4 - symbol:LOC100626422 "Uncharacterized p... 151 7.4e-11 1
RGD|1308793 - symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box pol... 162 7.4e-11 1
UNIPROTKB|Q64060 - symbol:Ddx4 "Probable ATP-dependent RN... 162 7.4e-11 1
UNIPROTKB|Q90ZF6 - symbol:olvas "VASA" species:8090 "Oryz... 161 7.7e-11 1
UNIPROTKB|D6RCM4 - symbol:DDX4 "Probable ATP-dependent RN... 159 9.5e-11 1
UNIPROTKB|D6RDK4 - symbol:DDX4 "Probable ATP-dependent RN... 159 1.5e-10 1
UNIPROTKB|Q6GWX0 - symbol:DDX4 "Probable ATP-dependent RN... 159 1.6e-10 1
UNIPROTKB|Q9NQI0 - symbol:DDX4 "Probable ATP-dependent RN... 159 1.6e-10 1
UNIPROTKB|E2RMU5 - symbol:DDX4 "Uncharacterized protein" ... 158 2.1e-10 1
UNIPROTKB|Q4R5S7 - symbol:DDX4 "Probable ATP-dependent RN... 157 2.6e-10 1
UNIPROTKB|B4E3C4 - symbol:DDX3X "cDNA FLJ52848, highly si... 115 2.9e-10 2
UNIPROTKB|F1MYC6 - symbol:DDX4 "Probable ATP-dependent RN... 156 3.4e-10 1
UNIPROTKB|Q5W5U4 - symbol:DDX4 "Probable ATP-dependent RN... 156 3.4e-10 1
DICTYBASE|DDB_G0288501 - symbol:ddx42 "DEAD/DEAH box heli... 115 4.3e-10 3
UNIPROTKB|B2C6E9 - symbol:B2C6E9 "VASA" species:9337 "Tri... 152 8.6e-10 1
ASPGD|ASPL0000006660 - symbol:AN5931 species:162425 "Emer... 102 1.2e-09 2
WB|WBGene00002244 - symbol:laf-1 species:6239 "Caenorhabd... 149 1.8e-09 1
UNIPROTKB|Q3MSQ8 - symbol:ddx4 "Probable ATP-dependent RN... 149 1.9e-09 1
UNIPROTKB|F1NL04 - symbol:DDX4 "Uncharacterized protein" ... 147 2.0e-09 1
UNIPROTKB|F1N991 - symbol:DDX4 "Uncharacterized protein" ... 147 2.2e-09 1
CGD|CAL0003204 - symbol:DBP2 species:5476 "Candida albica... 100 2.8e-09 2
UNIPROTKB|Q0C354 - symbol:rhlE "ATP-dependent RNA helicas... 108 3.2e-09 2
TAIR|locus:2075034 - symbol:AT3G09720 species:3702 "Arabi... 115 3.6e-09 2
POMBASE|SPCC1795.11 - symbol:sum3 "translation initiation... 145 4.2e-09 1
WB|WBGene00001600 - symbol:glh-3 species:6239 "Caenorhabd... 128 4.4e-09 2
UNIPROTKB|O01836 - symbol:glh-3 "ATP-dependent RNA helica... 128 4.4e-09 2
FB|FBgn0035720 - symbol:CG10077 species:7227 "Drosophila ... 104 4.9e-09 2
UNIPROTKB|E1C2R8 - symbol:DDX17 "Uncharacterized protein"... 102 1.2e-08 2
UNIPROTKB|A7E307 - symbol:DDX17 "Uncharacterized protein"... 102 2.4e-08 2
UNIPROTKB|E2RJ60 - symbol:DDX17 "Uncharacterized protein"... 102 2.4e-08 2
MGI|MGI:1914290 - symbol:Ddx17 "DEAD (Asp-Glu-Ala-Asp) bo... 102 2.4e-08 2
UNIPROTKB|C9JMU5 - symbol:DDX17 "Probable ATP-dependent R... 102 2.5e-08 2
UNIPROTKB|Q4K4H4 - symbol:rhlE_2 "Putative ATP-dependent ... 109 2.8e-08 2
UNIPROTKB|Q92841 - symbol:DDX17 "Probable ATP-dependent R... 102 3.2e-08 2
UNIPROTKB|H3BLZ8 - symbol:DDX17 "Probable ATP-dependent R... 102 3.2e-08 2
UNIPROTKB|F1PID8 - symbol:DDX17 "Uncharacterized protein"... 102 3.3e-08 2
UNIPROTKB|F1SKQ0 - symbol:DDX17 "Uncharacterized protein"... 102 3.3e-08 2
GENEDB_PFALCIPARUM|PF08_0096 - symbol:PF08_0096 "RNA heli... 106 3.5e-08 2
UNIPROTKB|Q8IAU1 - symbol:PF08_0096 "RNA helicase, putati... 106 3.5e-08 2
SGD|S000005056 - symbol:DBP2 "ATP-dependent RNA helicase ... 98 3.8e-08 2
ZFIN|ZDB-GENE-050706-53 - symbol:ddx42 "DEAD (Asp-Glu-Ala... 118 4.3e-08 2
TIGR_CMR|CPS_2658 - symbol:CPS_2658 "ATP-dependent RNA he... 110 4.5e-08 2
UNIPROTKB|A4QSS5 - symbol:DBP2 "ATP-dependent RNA helicas... 94 4.6e-08 2
TIGR_CMR|CPS_1418 - symbol:CPS_1418 "ATP-dependent RNA he... 128 1.4e-07 1
CGD|CAL0005460 - symbol:DBP3 species:5476 "Candida albica... 109 1.5e-07 2
POMBASE|SPBP8B7.16c - symbol:dbp2 "ATP-dependent RNA heli... 99 1.7e-07 2
FB|FBgn0036754 - symbol:CG5589 species:7227 "Drosophila m... 129 2.0e-07 1
ASPGD|ASPL0000013201 - symbol:AN4233 species:162425 "Emer... 109 3.5e-07 2
ZFIN|ZDB-GENE-030131-18 - symbol:si:dkey-156n14.5 "si:dke... 96 4.0e-07 2
CGD|CAL0000056 - symbol:orf19.7546 species:5476 "Candida ... 109 4.2e-07 2
WB|WBGene00001601 - symbol:glh-4 species:6239 "Caenorhabd... 129 4.6e-07 1
ZFIN|ZDB-GENE-030131-925 - symbol:ddx5 "DEAD (Asp-Glu-Ala... 93 5.6e-07 2
TAIR|locus:2084178 - symbol:DRH1 "DEAD box RNA helicase 1... 89 8.4e-07 2
TIGR_CMR|GSU_0914 - symbol:GSU_0914 "ATP-dependent RNA he... 119 1.5e-06 1
TAIR|locus:2035741 - symbol:RH20 "RNA helicase 20" specie... 92 1.6e-06 2
DICTYBASE|DDB_G0293168 - symbol:ddx17 "DEAD/DEAH box heli... 90 1.8e-06 3
TAIR|locus:2032910 - symbol:RH36 "RNA helicase 36" specie... 118 2.3e-06 1
SGD|S000001107 - symbol:RRP3 "Protein involved in rRNA pr... 118 2.4e-06 1
UNIPROTKB|Q9KS53 - symbol:VC1407 "ATP-dependent RNA helic... 116 2.7e-06 1
TIGR_CMR|VC_1407 - symbol:VC_1407 "ATP-dependent RNA heli... 116 2.7e-06 1
UNIPROTKB|F1NAH6 - symbol:LOC100859810 "Uncharacterized p... 85 3.5e-06 2
UNIPROTKB|A3KN07 - symbol:DDX41 "Uncharacterized protein"... 85 4.7e-06 2
UNIPROTKB|E2R052 - symbol:DDX41 "Uncharacterized protein"... 85 4.7e-06 2
UNIPROTKB|Q9UJV9 - symbol:DDX41 "Probable ATP-dependent R... 85 4.7e-06 2
MGI|MGI:1920185 - symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) bo... 85 4.7e-06 2
WARNING: Descriptions of 89 database sequences were not reported due to the
limiting value of parameter V = 100.
>DICTYBASE|DDB_G0283661 [details] [associations]
symbol:ddx3 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006413 "translational initiation" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0283661 GO:GO:0005524 GO:GO:0005737
EMBL:AAFI02000056 GenomeReviews:CM000153_GR GO:GO:0006397
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K11594 HSSP:P09052 RefSeq:XP_638950.1 ProteinModelPortal:Q54QS3
SMR:Q54QS3 PRIDE:Q54QS3 EnsemblProtists:DDB0233447 GeneID:8624189
KEGG:ddi:DDB_G0283661 OMA:SEHICAP Uniprot:Q54QS3
Length = 712
Score = 157 (60.3 bits), Expect = 2.4e-21, Sum P(3) = 2.4e-21
Identities = 30/45 (66%), Positives = 35/45 (77%)
Query: 48 KYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIM 92
KY KPTPVQ+ A I++ RDLMACAQTGS KT F FPII+GI+
Sbjct: 266 KYTKPTPVQKSALPIILKNRDLMACAQTGSGKTAAFLFPIISGIL 310
Score = 106 (42.4 bits), Expect = 2.4e-21, Sum P(3) = 2.4e-21
Identities = 28/49 (57%), Positives = 34/49 (69%)
Query: 101 ELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
++ EL R D L+AT RLV+LL RGRVSL I +YL L EA D+ LDM
Sbjct: 373 QINELDRGCDILVATTGRLVDLLMRGRVSLSKI-KYLVLDEA-DRMLDM 419
Score = 43 (20.2 bits), Expect = 2.4e-21, Sum P(3) = 2.4e-21
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 13 SENAAPASSSTNTLSSPAARFA-YVPQHLRNK 43
S+ ++ SS+ NT ++ YVP RNK
Sbjct: 22 SDKSSSTSSNNNTTTTTTQTSEPYVPPSRRNK 53
>RGD|1564771 [details] [associations]
symbol:Ddx3x "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
X-linked" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1564771 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
OMA:KYERGGN OrthoDB:EOG47D9FV IPI:IPI00362534 PhosphoSite:D4ADE8
PRIDE:D4ADE8 Ensembl:ENSRNOT00000039551 UCSC:RGD:1564771
Uniprot:D4ADE8
Length = 662
Score = 138 (53.6 bits), Expect = 1.2e-19, Sum P(3) = 1.2e-19
Identities = 29/62 (46%), Positives = 40/62 (64%)
Query: 48 KYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYYS-ARKELRELA 106
+Y +PTPVQ+HA I+ RDLMACAQTGS KT F PI++ I + A + ++E
Sbjct: 199 RYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYADGPGEALRAMKENG 258
Query: 107 RW 108
R+
Sbjct: 259 RY 260
Score = 92 (37.4 bits), Expect = 1.2e-19, Sum P(3) = 1.2e-19
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 100 KELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
+++R+L R L+AT RLV+++ERG++ L +YL L EA D+ LDM
Sbjct: 308 QQIRDLERGCHLLVATPGRLVDMMERGKIGLDFC-KYLVLDEA-DRMLDM 355
Score = 59 (25.8 bits), Expect = 1.2e-19, Sum P(3) = 1.2e-19
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 20 SSSTNTLSSPAARFAYVPQHLRNKPRT 46
SS T S A++ Y+P HLRN+ T
Sbjct: 23 SSDNQTGGSTASKGRYIPPHLRNREAT 49
>FB|FBgn0263231 [details] [associations]
symbol:bel "belle" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS;IMP] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0043186 "P granule" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] [GO:0002168 "instar larval
development" evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0016442 "RNA-induced silencing complex" evidence=IDA]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0010468
"regulation of gene expression" evidence=IMP] [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:AE014297
GO:GO:0005524 GO:GO:0005875 GO:GO:0016246 GO:GO:0007286
GO:GO:0005811 GO:GO:0043025 GO:GO:0048477 GO:GO:0003723
GO:GO:0000070 GO:GO:0016442 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 GO:GO:0002168 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
GeneTree:ENSGT00620000087942 KO:K11594 HSSP:P09052 EMBL:AY089613
RefSeq:NP_536783.1 UniGene:Dm.7823 ProteinModelPortal:Q9VHP0
SMR:Q9VHP0 IntAct:Q9VHP0 STRING:Q9VHP0 PaxDb:Q9VHP0 PRIDE:Q9VHP0
EnsemblMetazoa:FBtr0081888 GeneID:45826 KEGG:dme:Dmel_CG9748
UCSC:CG9748-RA CTD:100035747 FlyBase:FBgn0263231 InParanoid:Q9VHP0
OMA:TILWVYE OrthoDB:EOG4DNCKG PhylomeDB:Q9VHP0 GenomeRNAi:45826
NextBio:838377 Bgee:Q9VHP0 Uniprot:Q9VHP0
Length = 798
Score = 158 (60.7 bits), Expect = 2.1e-19, Sum P(3) = 2.1e-19
Identities = 30/50 (60%), Positives = 36/50 (72%)
Query: 40 LRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIIN 89
+RN +Y KPTPVQ+HA I++ GRDLMACAQTGS KT F PI+N
Sbjct: 306 IRNNVALARYDKPTPVQKHAIPIIINGRDLMACAQTGSGKTAAFLVPILN 355
Score = 85 (35.0 bits), Expect = 2.1e-19, Sum P(3) = 2.1e-19
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 100 KELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
+++REL R ++AT RL +++ RG+V L+ I R+L L EA D+ LDM
Sbjct: 420 EQMRELDRGCHLIVATPGRLEDMITRGKVGLENI-RFLVLDEA-DRMLDM 467
Score = 46 (21.3 bits), Expect = 2.1e-19, Sum P(3) = 2.1e-19
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 12 ASENAAPASSSTNTLSSPAARFAYVPQHLR 41
+++ + P +S T+T S YVP HLR
Sbjct: 25 SADYSGPITSKTSTNSVTGG--VYVPPHLR 52
>UNIPROTKB|G5E631 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2001243 "negative regulation of intrinsic apoptotic
signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
"intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
"cellular response to osmotic stress" evidence=IEA] [GO:0071243
"cellular response to arsenic-containing substance" evidence=IEA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
"positive regulation of translational initiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0043280 "positive regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043024 "ribosomal small subunit
binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
"negative regulation of protein complex assembly" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0030307 "positive regulation of cell growth" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
signaling pathway via death domain receptors" evidence=IEA]
[GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654
OMA:KYERGGN EMBL:DAAA02073612 RefSeq:NP_001179891.1 UniGene:Bt.9783
PRIDE:G5E631 Ensembl:ENSBTAT00000050399 GeneID:510093
KEGG:bta:510093 NextBio:20869274 Uniprot:G5E631
Length = 661
Score = 138 (53.6 bits), Expect = 3.0e-19, Sum P(3) = 3.0e-19
Identities = 29/62 (46%), Positives = 40/62 (64%)
Query: 48 KYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYYS-ARKELRELA 106
+Y +PTPVQ+HA I+ RDLMACAQTGS KT F PI++ I + A + ++E
Sbjct: 198 RYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENG 257
Query: 107 RW 108
R+
Sbjct: 258 RY 259
Score = 92 (37.4 bits), Expect = 3.0e-19, Sum P(3) = 3.0e-19
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 100 KELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
+++R+L R L+AT RLV+++ERG++ L +YL L EA D+ LDM
Sbjct: 307 QQIRDLERGCHLLVATPGRLVDMMERGKIGLDFC-KYLVLDEA-DRMLDM 354
Score = 55 (24.4 bits), Expect = 3.0e-19, Sum P(3) = 3.0e-19
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 20 SSSTNTLSSPAARFAYVPQHLRNKPRT 46
SS + S A++ Y+P HLRN+ T
Sbjct: 23 SSDNQSGGSTASKGRYIPPHLRNREAT 49
>UNIPROTKB|F1RX16 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001243 "negative regulation of intrinsic apoptotic
signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
"intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
"cellular response to osmotic stress" evidence=IEA] [GO:0071243
"cellular response to arsenic-containing substance" evidence=IEA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
"positive regulation of translational initiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0043280 "positive regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043024 "ribosomal small subunit
binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
"negative regulation of protein complex assembly" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0030307 "positive regulation of cell growth" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
signaling pathway via death domain receptors" evidence=IEA]
[GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 OMA:KYERGGN
EMBL:CU861899 Ensembl:ENSSSCT00000013398 Uniprot:F1RX16
Length = 661
Score = 138 (53.6 bits), Expect = 3.0e-19, Sum P(3) = 3.0e-19
Identities = 29/62 (46%), Positives = 40/62 (64%)
Query: 48 KYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYYS-ARKELRELA 106
+Y +PTPVQ+HA I+ RDLMACAQTGS KT F PI++ I + A + ++E
Sbjct: 199 RYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENG 258
Query: 107 RW 108
R+
Sbjct: 259 RY 260
Score = 92 (37.4 bits), Expect = 3.0e-19, Sum P(3) = 3.0e-19
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 100 KELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
+++R+L R L+AT RLV+++ERG++ L +YL L EA D+ LDM
Sbjct: 308 QQIRDLERGCHLLVATPGRLVDMMERGKIGLDFC-KYLVLDEA-DRMLDM 355
Score = 55 (24.4 bits), Expect = 3.0e-19, Sum P(3) = 3.0e-19
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 20 SSSTNTLSSPAARFAYVPQHLRNKPRT 46
SS + S A++ Y+P HLRN+ T
Sbjct: 23 SSDNQSGGSTASKGRYIPPHLRNREAT 49
>UNIPROTKB|J9P0V9 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654 EMBL:AAEX03026295
RefSeq:XP_861268.1 Ensembl:ENSCAFT00000045177 GeneID:480886
KEGG:cfa:480886 Uniprot:J9P0V9
Length = 662
Score = 138 (53.6 bits), Expect = 3.0e-19, Sum P(3) = 3.0e-19
Identities = 29/62 (46%), Positives = 40/62 (64%)
Query: 48 KYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYYS-ARKELRELA 106
+Y +PTPVQ+HA I+ RDLMACAQTGS KT F PI++ I + A + ++E
Sbjct: 199 RYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENG 258
Query: 107 RW 108
R+
Sbjct: 259 RY 260
Score = 92 (37.4 bits), Expect = 3.0e-19, Sum P(3) = 3.0e-19
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 100 KELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
+++R+L R L+AT RLV+++ERG++ L +YL L EA D+ LDM
Sbjct: 308 QQIRDLERGCHLLVATPGRLVDMMERGKIGLDFC-KYLVLDEA-DRMLDM 355
Score = 55 (24.4 bits), Expect = 3.0e-19, Sum P(3) = 3.0e-19
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 20 SSSTNTLSSPAARFAYVPQHLRNKPRT 46
SS + S A++ Y+P HLRN+ T
Sbjct: 23 SSDNQSGGSTASKGRYIPPHLRNREAT 49
>UNIPROTKB|O00571 [details] [associations]
symbol:DDX3X "ATP-dependent RNA helicase DDX3X"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0016607 "nuclear
speck" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0030307 "positive
regulation of cell growth" evidence=IMP] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IDA] [GO:1900087
"positive regulation of G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0045948 "positive regulation of translational
initiation" evidence=IMP] [GO:0031333 "negative regulation of
protein complex assembly" evidence=IDA] [GO:0008190 "eukaryotic
initiation factor 4E binding" evidence=IDA] [GO:0017148 "negative
regulation of translation" evidence=IMP] [GO:0034063 "stress
granule assembly" evidence=IDA] [GO:0010494 "cytoplasmic stress
granule" evidence=IDA] [GO:0071470 "cellular response to osmotic
stress" evidence=IDA] [GO:0071243 "cellular response to
arsenic-containing substance" evidence=IDA] [GO:2001243 "negative
regulation of intrinsic apoptotic signaling pathway" evidence=IMP]
[GO:0007059 "chromosome segregation" evidence=IMP] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0045727
"positive regulation of translation" evidence=IDA] [GO:0008143
"poly(A) RNA binding" evidence=IDA] [GO:0031369 "translation
initiation factor binding" evidence=IDA] [GO:0042256 "mature
ribosome assembly" evidence=IMP] [GO:0043024 "ribosomal small
subunit binding" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=IDA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IMP;IDA]
[GO:0009615 "response to virus" evidence=IDA] [GO:0007243
"intracellular protein kinase cascade" evidence=IDA] [GO:0032728
"positive regulation of interferon-beta production" evidence=TAS]
[GO:0045087 "innate immune response" evidence=IMP] [GO:0071651
"positive regulation of chemokine (C-C motif) ligand 5 production"
evidence=TAS] [GO:0035613 "RNA stem-loop binding" evidence=IDA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IDA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IDA] [GO:0008134
"transcription factor binding" evidence=IDA] [GO:0030308 "negative
regulation of cell growth" evidence=IDA] [GO:0008625 "extrinsic
apoptotic signaling pathway via death domain receptors"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043154 "negative regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IMP] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=IMP] [GO:0043280 "positive regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IMP]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0019048
GO:GO:0043066 GO:GO:0043154 GO:GO:0030307 GO:GO:0007059
GO:GO:0030308 GO:GO:0005741 GO:GO:0017148 GO:GO:0003677
GO:GO:0031333 GO:GO:0016607 GO:GO:0045944 GO:GO:0045087
GO:GO:0007243 GO:GO:0006351 GO:GO:0009615 GO:GO:0043065
GO:GO:0048027 GO:GO:0043280 GO:GO:0071470 GO:GO:0004003
GO:GO:0097193 GO:GO:1900087 GO:GO:0008134 EMBL:CH471141
GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
KO:K11594 HOVERGEN:HBG015893 EMBL:U50553 EMBL:AF061337
EMBL:AF000983 EMBL:AF000982 EMBL:AK291153 EMBL:AK304689
EMBL:AL391647 EMBL:Z93015 EMBL:BC011819 IPI:IPI00215637
IPI:IPI00985384 RefSeq:NP_001180346.1 RefSeq:NP_001347.3
UniGene:Hs.380774 PDB:2I4I PDB:2JGN PDB:3JRV PDBsum:2I4I
PDBsum:2JGN PDBsum:3JRV ProteinModelPortal:O00571 SMR:O00571
DIP:DIP-27551N IntAct:O00571 MINT:MINT-93217 STRING:O00571
PhosphoSite:O00571 REPRODUCTION-2DPAGE:IPI00215637
SWISS-2DPAGE:O00571 PaxDb:O00571 PeptideAtlas:O00571 PRIDE:O00571
Ensembl:ENST00000399959 Ensembl:ENST00000457138 GeneID:1654
KEGG:hsa:1654 UCSC:uc004dfe.3 CTD:1654 GeneCards:GC0XP041192
HGNC:HGNC:2745 HPA:HPA001648 HPA:HPA005631 MIM:300160
neXtProt:NX_O00571 PharmGKB:PA27216 InParanoid:O00571 OMA:KYERGGN
OrthoDB:EOG47D9FV PhylomeDB:O00571 BindingDB:O00571
ChEMBL:CHEMBL5553 ChiTaRS:DDX3X EvolutionaryTrace:O00571
GenomeRNAi:1654 NextBio:6810 ArrayExpress:O00571 Bgee:O00571
CleanEx:HS_DDX3X Genevestigator:O00571 GermOnline:ENSG00000124487
GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 GO:GO:0071651
GO:GO:0032728 Uniprot:O00571
Length = 662
Score = 138 (53.6 bits), Expect = 3.0e-19, Sum P(3) = 3.0e-19
Identities = 29/62 (46%), Positives = 40/62 (64%)
Query: 48 KYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYYS-ARKELRELA 106
+Y +PTPVQ+HA I+ RDLMACAQTGS KT F PI++ I + A + ++E
Sbjct: 199 RYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENG 258
Query: 107 RW 108
R+
Sbjct: 259 RY 260
Score = 92 (37.4 bits), Expect = 3.0e-19, Sum P(3) = 3.0e-19
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 100 KELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
+++R+L R L+AT RLV+++ERG++ L +YL L EA D+ LDM
Sbjct: 308 QQIRDLERGCHLLVATPGRLVDMMERGKIGLDFC-KYLVLDEA-DRMLDM 355
Score = 55 (24.4 bits), Expect = 3.0e-19, Sum P(3) = 3.0e-19
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 20 SSSTNTLSSPAARFAYVPQHLRNKPRT 46
SS + S A++ Y+P HLRN+ T
Sbjct: 23 SSDNQSGGSTASKGRYIPPHLRNREAT 49
>MGI|MGI:103064 [details] [associations]
symbol:Ddx3x "DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3,
X-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003723
"RNA binding" evidence=ISO] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0006200 "ATP
catabolic process" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006417 "regulation
of translation" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0007059 "chromosome segregation" evidence=ISO]
[GO:0007243 "intracellular protein kinase cascade" evidence=ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0008143 "poly(A) RNA binding" evidence=ISO] [GO:0008152
"metabolic process" evidence=IEA] [GO:0008190 "eukaryotic
initiation factor 4E binding" evidence=ISO] [GO:0008625 "extrinsic
apoptotic signaling pathway via death domain receptors"
evidence=ISO] [GO:0009615 "response to virus" evidence=ISO]
[GO:0010494 "cytoplasmic stress granule" evidence=ISO] [GO:0010501
"RNA secondary structure unwinding" evidence=ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017148 "negative regulation of translation" evidence=ISO]
[GO:0030307 "positive regulation of cell growth" evidence=ISO]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0031333 "negative regulation of protein complex assembly"
evidence=ISO] [GO:0031369 "translation initiation factor binding"
evidence=ISO] [GO:0034063 "stress granule assembly" evidence=ISO]
[GO:0035613 "RNA stem-loop binding" evidence=ISO] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0042256 "mature ribosome
assembly" evidence=ISO] [GO:0043024 "ribosomal small subunit
binding" evidence=ISO] [GO:0043065 "positive regulation of
apoptotic process" evidence=ISO] [GO:0043066 "negative regulation
of apoptotic process" evidence=ISO] [GO:0043154 "negative
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISO] [GO:0043280 "positive regulation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=ISO] [GO:0045087 "innate immune response"
evidence=ISO] [GO:0045727 "positive regulation of translation"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0045948
"positive regulation of translational initiation" evidence=ISO]
[GO:0048027 "mRNA 5'-UTR binding" evidence=ISO] [GO:0071243
"cellular response to arsenic-containing substance" evidence=ISO]
[GO:0071470 "cellular response to osmotic stress" evidence=ISO]
[GO:0097193 "intrinsic apoptotic signaling pathway" evidence=ISO]
[GO:1900087 "positive regulation of G1/S transition of mitotic cell
cycle" evidence=ISO] [GO:2001243 "negative regulation of intrinsic
apoptotic signaling pathway" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:103064
GO:GO:0005524 GO:GO:0005634 GO:GO:0043066 GO:GO:0043154
GO:GO:0030307 GO:GO:0007059 GO:GO:0005741 GO:GO:0017148
GO:GO:0003677 GO:GO:0031333 GO:GO:0016607 GO:GO:0045944
GO:GO:0045087 GO:GO:0007243 GO:GO:0006351 GO:GO:0009615
GO:GO:0043065 GO:GO:0048027 GO:GO:0043280 GO:GO:0071470
GO:GO:0004003 GO:GO:0097193 GO:GO:1900087 GO:GO:0008134
GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 KO:K11594
HOVERGEN:HBG015893 CTD:1654 OrthoDB:EOG47D9FV ChiTaRS:DDX3X
GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 EMBL:Z38117 EMBL:L25126
IPI:IPI00230035 PIR:I84741 RefSeq:NP_034158.1 UniGene:Mm.289662
ProteinModelPortal:Q62167 SMR:Q62167 IntAct:Q62167
MINT:MINT-1870173 STRING:Q62167 PhosphoSite:Q62167
REPRODUCTION-2DPAGE:Q62167 PaxDb:Q62167 PRIDE:Q62167
Ensembl:ENSMUST00000000804 GeneID:13205 KEGG:mmu:13205
InParanoid:Q62167 NextBio:283364 Bgee:Q62167 CleanEx:MM_ERH
Genevestigator:Q62167 GermOnline:ENSMUSG00000000787 Uniprot:Q62167
Length = 662
Score = 138 (53.6 bits), Expect = 3.0e-19, Sum P(3) = 3.0e-19
Identities = 29/62 (46%), Positives = 40/62 (64%)
Query: 48 KYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYYS-ARKELRELA 106
+Y +PTPVQ+HA I+ RDLMACAQTGS KT F PI++ I + A + ++E
Sbjct: 199 RYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYADGPGEALRAMKENG 258
Query: 107 RW 108
R+
Sbjct: 259 RY 260
Score = 92 (37.4 bits), Expect = 3.0e-19, Sum P(3) = 3.0e-19
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 100 KELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
+++R+L R L+AT RLV+++ERG++ L +YL L EA D+ LDM
Sbjct: 308 QQIRDLERGCHLLVATPGRLVDMMERGKIGLDFC-KYLVLDEA-DRMLDM 355
Score = 55 (24.4 bits), Expect = 3.0e-19, Sum P(3) = 3.0e-19
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 20 SSSTNTLSSPAARFAYVPQHLRNKPRT 46
SS + S A++ Y+P HLRN+ T
Sbjct: 23 SSDNQSGGSTASKGRYIPPHLRNREAT 49
>UNIPROTKB|E2RRQ7 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AAEX03026295
Ensembl:ENSCAFT00000022643 Uniprot:E2RRQ7
Length = 706
Score = 138 (53.6 bits), Expect = 3.9e-19, Sum P(3) = 3.9e-19
Identities = 29/62 (46%), Positives = 40/62 (64%)
Query: 48 KYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYYS-ARKELRELA 106
+Y +PTPVQ+HA I+ RDLMACAQTGS KT F PI++ I + A + ++E
Sbjct: 241 RYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENG 300
Query: 107 RW 108
R+
Sbjct: 301 RY 302
Score = 92 (37.4 bits), Expect = 3.9e-19, Sum P(3) = 3.9e-19
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 100 KELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
+++R+L R L+AT RLV+++ERG++ L +YL L EA D+ LDM
Sbjct: 350 QQIRDLERGCHLLVATPGRLVDMMERGKIGLDFC-KYLVLDEA-DRMLDM 397
Score = 55 (24.4 bits), Expect = 3.9e-19, Sum P(3) = 3.9e-19
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 20 SSSTNTLSSPAARFAYVPQHLRNKPRT 46
SS + S A++ Y+P HLRN+ T
Sbjct: 23 SSDNQSGGSTASKGRYIPPHLRNREAT 49
>ASPGD|ASPL0000077157 [details] [associations]
symbol:AN10557 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IEA]
[GO:0031137 "regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0002183 "cytoplasmic translational initiation"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0010628 "positive regulation of gene expression" evidence=IEA]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0033592 "RNA strand annealing activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:BN001303 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:GNWANAN EMBL:AACD01000077 ProteinModelPortal:C8V8H4 SMR:C8V8H4
PRIDE:C8V8H4 EnsemblFungi:CADANIAT00005985 Uniprot:C8V8H4
Length = 668
Score = 155 (59.6 bits), Expect = 4.4e-19, Sum P(2) = 4.4e-19
Identities = 34/81 (41%), Positives = 48/81 (59%)
Query: 11 FASENAAPASSSTNTLSSPAARFAYVP--QHLRNKPRTYKYVKPTPVQRHATSILVAGRD 68
FA+ + P +S + + P F P HL + +Y PTPVQ+++ I++ GRD
Sbjct: 166 FANYDDIPVEASGHDVPEPVNTFTNPPLDDHLISNIALARYQTPTPVQKYSIPIVMNGRD 225
Query: 69 LMACAQTGSRKTTPFCFPIIN 89
LMACAQTGS KT F FPI++
Sbjct: 226 LMACAQTGSGKTGGFLFPILS 246
Score = 109 (43.4 bits), Expect = 4.4e-19, Sum P(2) = 4.4e-19
Identities = 27/49 (55%), Positives = 37/49 (75%)
Query: 101 ELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
+LR++ R D L+AT RLV+L+ERGR+SL + I+YL L EA D+ LDM
Sbjct: 314 QLRQIERGCDLLVATPGRLVDLIERGRISL-VNIKYLILDEA-DRMLDM 360
Score = 42 (19.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 32 RFAYVPQHLRNK 43
R AY+P HLR +
Sbjct: 29 RAAYIPPHLRQR 40
>UNIPROTKB|B4DXX7 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893
UniGene:Hs.99120 HGNC:HGNC:2699 EMBL:AC004474 EMBL:AK302172
IPI:IPI00646152 SMR:B4DXX7 STRING:B4DXX7 Ensembl:ENST00000537441
UCSC:uc011nar.1 Uniprot:B4DXX7
Length = 657
Score = 141 (54.7 bits), Expect = 7.2e-19, Sum P(3) = 7.2e-19
Identities = 30/62 (48%), Positives = 40/62 (64%)
Query: 48 KYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYYS-ARKELRELA 106
+Y +PTPVQ+HA I+ RDLMACAQTGS KT F PI++ I + A K ++E
Sbjct: 194 RYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENG 253
Query: 107 RW 108
R+
Sbjct: 254 RY 255
Score = 92 (37.4 bits), Expect = 7.2e-19, Sum P(3) = 7.2e-19
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 100 KELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
+++R+L R L+AT RLV+++ERG++ L +YL L EA D+ LDM
Sbjct: 303 QQIRDLERGCHLLVATPGRLVDMMERGKIGLDFC-KYLVLDEA-DRMLDM 350
Score = 48 (22.0 bits), Expect = 7.2e-19, Sum P(3) = 7.2e-19
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 27 SSPAARFAYVPQHLRNK 43
+S A++ Y+P HLRN+
Sbjct: 27 ASTASKGRYIPPHLRNR 43
>UNIPROTKB|O15523 [details] [associations]
symbol:DDX3Y "ATP-dependent RNA helicase DDX3Y"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 Orphanet:1646
HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 HPA:HPA001648
HPA:HPA005631 OrthoDB:EOG47D9FV EMBL:AF000985 EMBL:AF000984
EMBL:BC034942 IPI:IPI00293616 RefSeq:NP_001116137.1
RefSeq:NP_004651.2 UniGene:Hs.99120 ProteinModelPortal:O15523
SMR:O15523 IntAct:O15523 MINT:MINT-2999090 STRING:O15523
PhosphoSite:O15523 PaxDb:O15523 PRIDE:O15523
Ensembl:ENST00000336079 Ensembl:ENST00000360160 GeneID:8653
KEGG:hsa:8653 UCSC:uc004fsu.1 CTD:8653 GeneCards:GC0YP015016
HGNC:HGNC:2699 MIM:400010 neXtProt:NX_O15523 PharmGKB:PA27168
InParanoid:O15523 OMA:GNWANAN PhylomeDB:O15523 GenomeRNAi:8653
NextBio:32449 ArrayExpress:O15523 Bgee:O15523 CleanEx:HS_DDX3Y
Genevestigator:O15523 GermOnline:ENSG00000067048 Uniprot:O15523
Length = 660
Score = 141 (54.7 bits), Expect = 7.4e-19, Sum P(3) = 7.4e-19
Identities = 30/62 (48%), Positives = 40/62 (64%)
Query: 48 KYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYYS-ARKELRELA 106
+Y +PTPVQ+HA I+ RDLMACAQTGS KT F PI++ I + A K ++E
Sbjct: 197 RYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENG 256
Query: 107 RW 108
R+
Sbjct: 257 RY 258
Score = 92 (37.4 bits), Expect = 7.4e-19, Sum P(3) = 7.4e-19
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 100 KELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
+++R+L R L+AT RLV+++ERG++ L +YL L EA D+ LDM
Sbjct: 306 QQIRDLERGCHLLVATPGRLVDMMERGKIGLDFC-KYLVLDEA-DRMLDM 353
Score = 48 (22.0 bits), Expect = 7.4e-19, Sum P(3) = 7.4e-19
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 27 SSPAARFAYVPQHLRNK 43
+S A++ Y+P HLRN+
Sbjct: 30 ASTASKGRYIPPHLRNR 46
>RGD|1309586 [details] [associations]
symbol:RGD1309586 "similar to probable ATP-dependent RNA
helicase - mouse" species:10116 "Rattus norvegicus" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1309586 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K11594 OMA:HIVQECD
OrthoDB:EOG4S7JPR EMBL:CH473985 IPI:IPI00954695
RefSeq:NP_001102328.1 UniGene:Rn.218622 Ensembl:ENSRNOT00000003378
GeneID:364073 KEGG:rno:364073 UCSC:RGD:1309586 CTD:364073
NextBio:684798 Uniprot:D3ZN21
Length = 659
Score = 137 (53.3 bits), Expect = 7.6e-19, Sum P(3) = 7.6e-19
Identities = 26/44 (59%), Positives = 32/44 (72%)
Query: 48 KYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGI 91
+Y +PTPVQ+HA I+ RDLMACAQTGS KT F PI++ I
Sbjct: 197 RYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQI 240
Score = 92 (37.4 bits), Expect = 7.6e-19, Sum P(3) = 7.6e-19
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 100 KELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
+++R+L R L+AT RLV+++ERG++ L +YL L EA D+ LDM
Sbjct: 306 QQIRDLERGCHLLVATPGRLVDMMERGKIGLDFC-KYLVLDEA-DRMLDM 353
Score = 52 (23.4 bits), Expect = 7.6e-19, Sum P(3) = 7.6e-19
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 20 SSSTNTLSSPAARFAYVPQHLRNKPRT 46
S + + +S A++ Y+P HLRN+ T
Sbjct: 23 SPDSQSGASTASKGRYIPPHLRNREAT 49
>UNIPROTKB|F1NIX1 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AADN02011031
IPI:IPI00822944 Ensembl:ENSGALT00000026172 ArrayExpress:F1NIX1
Uniprot:F1NIX1
Length = 638
Score = 138 (53.6 bits), Expect = 8.3e-19, Sum P(3) = 8.3e-19
Identities = 29/62 (46%), Positives = 40/62 (64%)
Query: 48 KYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYYS-ARKELRELA 106
+Y +PTPVQ+HA I+ RDLMACAQTGS KT F PI++ I + A + ++E
Sbjct: 177 RYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYADGPGDALRAMKENG 236
Query: 107 RW 108
R+
Sbjct: 237 RY 238
Score = 92 (37.4 bits), Expect = 8.3e-19, Sum P(3) = 8.3e-19
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 100 KELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
+++R+L R L+AT RLV+++ERG++ L +YL L EA D+ LDM
Sbjct: 286 QQIRDLERGCHLLVATPGRLVDMMERGKIGLDFC-KYLVLDEA-DRMLDM 333
Score = 50 (22.7 bits), Expect = 8.3e-19, Sum P(3) = 8.3e-19
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 20 SSSTNTLSSPAARFAYVPQHLRNK 43
SS + + S ++ Y+P HLRN+
Sbjct: 9 SSDSQSEGSATSKGRYIPPHLRNR 32
>UNIPROTKB|D3IVZ2 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 EMBL:DAAA02075532
EMBL:GQ259590 IPI:IPI00955537 UniGene:Bt.89461
Ensembl:ENSBTAT00000065838 OMA:MSHEAVK Uniprot:D3IVZ2
Length = 661
Score = 141 (54.7 bits), Expect = 9.4e-19, Sum P(3) = 9.4e-19
Identities = 30/62 (48%), Positives = 40/62 (64%)
Query: 48 KYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYYS-ARKELRELA 106
+Y +PTPVQ+HA I+ RDLMACAQTGS KT F PI++ I + A K ++E
Sbjct: 199 RYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKESG 258
Query: 107 RW 108
R+
Sbjct: 259 RY 260
Score = 92 (37.4 bits), Expect = 9.4e-19, Sum P(3) = 9.4e-19
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 100 KELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
+++R+L R L+AT RLV+++ERG++ L +YL L EA D+ LDM
Sbjct: 308 QQIRDLERGCHLLVATPGRLVDMMERGKIGLDFC-KYLVLDEA-DRMLDM 355
Score = 47 (21.6 bits), Expect = 9.4e-19, Sum P(3) = 9.4e-19
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 28 SPAARFAYVPQHLRNK 43
S A++ Y+P HLRN+
Sbjct: 32 STASKGRYIPPHLRNR 47
>UNIPROTKB|F1NIX2 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 EMBL:AADN02011031 IPI:IPI00579247
Ensembl:ENSGALT00000026171 ArrayExpress:F1NIX2 Uniprot:F1NIX2
Length = 636
Score = 137 (53.3 bits), Expect = 1.1e-18, Sum P(3) = 1.1e-18
Identities = 26/44 (59%), Positives = 32/44 (72%)
Query: 48 KYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGI 91
+Y +PTPVQ+HA I+ RDLMACAQTGS KT F PI++ I
Sbjct: 175 RYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQI 218
Score = 92 (37.4 bits), Expect = 1.1e-18, Sum P(3) = 1.1e-18
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 100 KELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
+++R+L R L+AT RLV+++ERG++ L +YL L EA D+ LDM
Sbjct: 285 QQIRDLERGCHLLVATPGRLVDMMERGKIGLDFC-KYLVLDEA-DRMLDM 332
Score = 50 (22.7 bits), Expect = 1.1e-18, Sum P(3) = 1.1e-18
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 20 SSSTNTLSSPAARFAYVPQHLRNK 43
SS + + S ++ Y+P HLRN+
Sbjct: 9 SSDSQSEGSATSKGRYIPPHLRNR 32
>UNIPROTKB|I3LDV0 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:TILWVYE EMBL:FP565155
Ensembl:ENSSSCT00000028884 Uniprot:I3LDV0
Length = 667
Score = 140 (54.3 bits), Expect = 1.3e-18, Sum P(3) = 1.3e-18
Identities = 30/62 (48%), Positives = 40/62 (64%)
Query: 48 KYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYYS-ARKELRELA 106
+Y +PTPVQ+HA I+ RDLMACAQTGS KT F PI++ I + A K ++E
Sbjct: 200 RYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENG 259
Query: 107 RW 108
R+
Sbjct: 260 RY 261
Score = 92 (37.4 bits), Expect = 1.3e-18, Sum P(3) = 1.3e-18
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 100 KELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
+++R+L R L+AT RLV+++ERG++ L +YL L EA D+ LDM
Sbjct: 309 QQIRDLERGCHLLVATPGRLVDMMERGKIGLDFC-KYLVLDEA-DRMLDM 356
Score = 47 (21.6 bits), Expect = 1.3e-18, Sum P(3) = 1.3e-18
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 28 SPAARFAYVPQHLRNK 43
S A++ Y+P HLRN+
Sbjct: 32 STASKGRYIPPHLRNR 47
>MGI|MGI:1349406 [details] [associations]
symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
Y-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1349406 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 OrthoDB:EOG47D9FV
CTD:8653 EMBL:AJ007376 EMBL:BC021453 EMBL:L25337 IPI:IPI00134371
RefSeq:NP_036138.1 UniGene:Mm.486436 ProteinModelPortal:Q62095
SMR:Q62095 STRING:Q62095 PhosphoSite:Q62095 PaxDb:Q62095
PRIDE:Q62095 Ensembl:ENSMUST00000091190 GeneID:26900 KEGG:mmu:26900
InParanoid:Q62095 NextBio:304749 Bgee:Q62095 Genevestigator:Q62095
GermOnline:ENSMUSG00000069045 Uniprot:Q62095
Length = 658
Score = 141 (54.7 bits), Expect = 1.9e-18, Sum P(3) = 1.9e-18
Identities = 30/62 (48%), Positives = 40/62 (64%)
Query: 48 KYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYYS-ARKELRELA 106
+Y +PTPVQ+HA I+ RDLMACAQTGS KT F PI++ I + A K ++E
Sbjct: 198 RYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAMKENG 257
Query: 107 RW 108
R+
Sbjct: 258 RY 259
Score = 92 (37.4 bits), Expect = 1.9e-18, Sum P(3) = 1.9e-18
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 100 KELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
+++R+L R L+AT RLV+++ERG++ L +YL L EA D+ LDM
Sbjct: 307 QQIRDLERGCHLLVATPGRLVDMMERGKIGLDFC-KYLVLDEA-DRMLDM 354
Score = 44 (20.5 bits), Expect = 1.9e-18, Sum P(3) = 1.9e-18
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 19 ASSSTNTLSSPAARFAYVPQHLRNK 43
+S + N + ++ Y+P HLRN+
Sbjct: 23 SSDNQNGGGNTESKGRYIPPHLRNR 47
>MGI|MGI:91842 [details] [associations]
symbol:D1Pas1 "DNA segment, Chr 1, Pasteur Institute 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:91842
GO:GO:0007275 GO:GO:0005524 GO:GO:0030154 GO:GO:0003677
GO:GO:0007283 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
KO:K11594 HOVERGEN:HBG015893 EMBL:J04847 EMBL:AK029542
IPI:IPI00133708 PIR:A32378 RefSeq:NP_149068.1 UniGene:Mm.108054
ProteinModelPortal:P16381 SMR:P16381 IntAct:P16381 STRING:P16381
PhosphoSite:P16381 PaxDb:P16381 PRIDE:P16381
Ensembl:ENSMUST00000045108 GeneID:110957 KEGG:mmu:110957 CTD:110957
InParanoid:P16381 OMA:HIVQECD OrthoDB:EOG4S7JPR NextBio:365019
Bgee:P16381 CleanEx:MM_D1PAS1 Genevestigator:P16381
GermOnline:ENSMUSG00000039224 Uniprot:P16381
Length = 660
Score = 137 (53.3 bits), Expect = 2.0e-18, Sum P(3) = 2.0e-18
Identities = 26/44 (59%), Positives = 32/44 (72%)
Query: 48 KYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGI 91
+Y +PTPVQ+HA I+ RDLMACAQTGS KT F PI++ I
Sbjct: 198 RYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQI 241
Score = 92 (37.4 bits), Expect = 2.0e-18, Sum P(3) = 2.0e-18
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 100 KELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
+++R+L R L+AT RLV+++ERG++ L +YL L EA D+ LDM
Sbjct: 307 QQIRDLERGCHLLVATPGRLVDMMERGKIGLDFC-KYLVLDEA-DRMLDM 354
Score = 48 (22.0 bits), Expect = 2.0e-18, Sum P(3) = 2.0e-18
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 20 SSSTNTLSSPAARFAYVPQHLRNK 43
S + + S A++ Y+P HLRN+
Sbjct: 23 SRDSQSGGSTASKGRYIPPHLRNR 46
>RGD|2314437 [details] [associations]
symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3 Y-linked"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:2314437 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 KO:K11594 CTD:8653
EMBL:FJ775727 IPI:IPI00196210 RefSeq:NP_001161137.1
UniGene:Rn.95841 ProteinModelPortal:C9WPN2 PRIDE:C9WPN2
GeneID:100312982 KEGG:rno:100312982 UCSC:RGD:2314437 Uniprot:C9WPN2
Length = 652
Score = 133 (51.9 bits), Expect = 1.3e-17, Sum P(3) = 1.3e-17
Identities = 29/62 (46%), Positives = 39/62 (62%)
Query: 48 KYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYYS-ARKELRELA 106
+Y +PTPVQ+HA I+ RDLMACAQTGS T F PI++ I + A K ++E
Sbjct: 192 RYTRPTPVQKHAIPIIKEKRDLMACAQTGSGCTAAFLLPILSQIYTDGPGEALKAMKENG 251
Query: 107 RW 108
R+
Sbjct: 252 RY 253
Score = 92 (37.4 bits), Expect = 1.3e-17, Sum P(3) = 1.3e-17
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 100 KELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
+++R+L R L+AT RLV+++ERG++ L +YL L EA D+ LDM
Sbjct: 301 QQIRDLERGCHLLVATPGRLVDMMERGKIGLDFC-KYLVLDEA-DRMLDM 348
Score = 44 (20.5 bits), Expect = 1.3e-17, Sum P(3) = 1.3e-17
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 20 SSSTNTLSSPAARFAYVPQHLRNK 43
S + N S ++ Y+P HLRN+
Sbjct: 20 SDNQNGGVSTESKGRYIPPHLRNR 43
>CGD|CAL0004832 [details] [associations]
symbol:orf19.7392 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0033592 "RNA strand annealing activity"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0071470 "cellular response to osmotic stress" evidence=IEA]
[GO:0031137 "regulation of conjugation with cellular fusion"
evidence=IEA] [GO:2000765 "regulation of cytoplasmic translation"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0004832 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:AACQ01000066 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K11594 RefSeq:XP_716633.1
ProteinModelPortal:Q5A4E2 SMR:Q5A4E2 PRIDE:Q5A4E2 GeneID:3641752
KEGG:cal:CaO19.7392 Uniprot:Q5A4E2
Length = 672
Score = 151 (58.2 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 11 FASENAAPASSSTNTLSSPAARFAYVP--QHLRNKPRTYKYVKPTPVQRHATSILVAGRD 68
F + + P +S + + P F P + L + ++ KPTPVQ+++ I+ AGRD
Sbjct: 166 FDNYDDIPVEASGDKVPEPITSFTAPPLDELLVENIQLSRFTKPTPVQKYSVPIVAAGRD 225
Query: 69 LMACAQTGSRKTTPFCFPIIN 89
LMACAQTGS KT F FP+++
Sbjct: 226 LMACAQTGSGKTGGFLFPVLS 246
Score = 99 (39.9 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 26/50 (52%), Positives = 35/50 (70%)
Query: 100 KELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
+++R + R D L+AT RL +LL+RG+VSL I RYL L EA D+ LDM
Sbjct: 311 QQMRNMDRGCDLLVATPGRLKDLLDRGKVSLANI-RYLVLDEA-DRMLDM 358
Score = 51 (23.0 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 19 ASSSTNTLSSPAARFAYVPQHLRNK 43
A++ N S R YVP HLRN+
Sbjct: 17 ANTVNNNNSFRGGRSQYVPPHLRNR 41
>SGD|S000005730 [details] [associations]
symbol:DED1 "ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0006413
"translational initiation" evidence=IEA;IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IC]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IMP;IDA]
[GO:0033592 "RNA strand annealing activity" evidence=IDA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000005730 GO:GO:0005524 GO:GO:0005737
EMBL:BK006948 GO:GO:0006413 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4 OMA:GNWANAN
EMBL:X57278 EMBL:Z75110 EMBL:X03245 PIR:S13653 RefSeq:NP_014847.3
RefSeq:NP_014849.3 ProteinModelPortal:P06634 SMR:P06634
DIP:DIP-5820N IntAct:P06634 MINT:MINT-697363 STRING:P06634
PaxDb:P06634 PeptideAtlas:P06634 EnsemblFungi:YOR204W GeneID:854379
GeneID:854381 KEGG:sce:YOR204W KEGG:sce:YOR206W CYGD:YOR204w
KO:K14833 SABIO-RK:P06634 NextBio:976514 Genevestigator:P06634
GermOnline:YOR204W GO:GO:0033592 Uniprot:P06634
Length = 604
Score = 145 (56.1 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 31/81 (38%), Positives = 45/81 (55%)
Query: 11 FASENAAPASSSTNTLSSPAARFAYVPQH--LRNKPRTYKYVKPTPVQRHATSILVAGRD 68
F + + P +S + P F P L + ++ KPTPVQ+++ I+ GRD
Sbjct: 122 FDNYDDIPVDASGKDVPEPITEFTSPPLDGLLLENIKLARFTKPTPVQKYSVPIVANGRD 181
Query: 69 LMACAQTGSRKTTPFCFPIIN 89
LMACAQTGS KT F FP+++
Sbjct: 182 LMACAQTGSGKTGGFLFPVLS 202
Score = 103 (41.3 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 26/49 (53%), Positives = 35/49 (71%)
Query: 101 ELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
+LRE+ R D L+AT RL +LLERG++SL + +YL L EA D+ LDM
Sbjct: 268 QLREIERGCDLLVATPGRLNDLLERGKISLANV-KYLVLDEA-DRMLDM 314
Score = 52 (23.4 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 9/12 (75%), Positives = 10/12 (83%)
Query: 35 YVPQHLRNKPRT 46
YVP HLR KPR+
Sbjct: 21 YVPPHLRGKPRS 32
>ZFIN|ZDB-GENE-030131-1565 [details] [associations]
symbol:ddx3 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 3" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-1565 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
KO:K11594 HOVERGEN:HBG015893 EMBL:BX545856 IPI:IPI00639693
RefSeq:NP_001119895.1 UniGene:Dr.104653 SMR:B0S6P6
Ensembl:ENSDART00000006867 GeneID:566947 KEGG:dre:566947 CTD:566947
OMA:IIMGNIN NextBio:20888452 Uniprot:B0S6P6
Length = 709
Score = 134 (52.2 bits), Expect = 1.8e-17, Sum P(3) = 1.8e-17
Identities = 25/47 (53%), Positives = 33/47 (70%)
Query: 48 KYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMRE 94
+Y +PTPVQ++A I+ RDLMACAQTGS KT F P+++ I E
Sbjct: 242 RYTRPTPVQKYAIPIIKTKRDLMACAQTGSGKTAAFLLPVLSQIYSE 288
Score = 91 (37.1 bits), Expect = 1.8e-17, Sum P(3) = 1.8e-17
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 100 KELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
+++R+L R L+AT RLV+++ERG++ L +YL L EA D+ LDM
Sbjct: 356 QQIRDLERGCHLLVATPGRLVDMMERGKIGLDYC-KYLVLDEA-DRMLDM 403
Score = 44 (20.5 bits), Expect = 1.8e-17, Sum P(3) = 1.8e-17
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 35 YVPQHLRNK 43
Y+P HLRNK
Sbjct: 35 YIPPHLRNK 43
>ZFIN|ZDB-GENE-980526-150 [details] [associations]
symbol:pl10 "pl10" species:7955 "Danio rerio"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-980526-150 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K11594 HOVERGEN:HBG015893
EMBL:BC059794 IPI:IPI00483337 RefSeq:NP_571016.2 UniGene:Dr.75779
ProteinModelPortal:Q6PBB2 SMR:Q6PBB2 GeneID:30116 KEGG:dre:30116
CTD:30116 InParanoid:Q6PBB2 NextBio:20806595 ArrayExpress:Q6PBB2
Uniprot:Q6PBB2
Length = 688
Score = 138 (53.6 bits), Expect = 1.9e-17, Sum P(3) = 1.9e-17
Identities = 25/44 (56%), Positives = 33/44 (75%)
Query: 48 KYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGI 91
+Y +PTPVQ+HA I+ + RDLMACAQTGS KT F P+++ I
Sbjct: 227 RYTRPTPVQKHAIPIIKSKRDLMACAQTGSGKTAAFLLPVLSQI 270
Score = 86 (35.3 bits), Expect = 1.9e-17, Sum P(3) = 1.9e-17
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 100 KELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
+++R+L R L+AT RL++++ERG++ L YL L EA D+ LDM
Sbjct: 340 QQIRDLERGCHLLVATPGRLLDMMERGKIGLDYC-NYLVLDEA-DRMLDM 387
Score = 44 (20.5 bits), Expect = 1.9e-17, Sum P(3) = 1.9e-17
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 35 YVPQHLRNK 43
Y+P HLRNK
Sbjct: 34 YIPPHLRNK 42
>SGD|S000006040 [details] [associations]
symbol:DBP1 "Putative ATP-dependent RNA helicase of the
DEAD-box protein family" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006413
"translational initiation" evidence=IEA;IMP] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000006040 GO:GO:0005524
GO:GO:0005737 GO:GO:0006413 EMBL:BK006949 GO:GO:0003743 EMBL:U43503
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
EMBL:X55993 PIR:S62003 RefSeq:NP_015206.1 ProteinModelPortal:P24784
SMR:P24784 DIP:DIP-2576N IntAct:P24784 MINT:MINT-426870
STRING:P24784 PaxDb:P24784 EnsemblFungi:YPL119C GeneID:855984
KEGG:sce:YPL119C CYGD:YPL119c GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN OrthoDB:EOG4XPTQ4
NextBio:980825 Genevestigator:P24784 GermOnline:YPL119C
Uniprot:P24784
Length = 617
Score = 145 (56.1 bits), Expect = 2.8e-17, Sum P(2) = 2.8e-17
Identities = 32/85 (37%), Positives = 46/85 (54%)
Query: 11 FASENAAPASSSTNTLSSPAARFAYVP--QHLRNKPRTYKYVKPTPVQRHATSILVAGRD 68
F + + P +S + P F+ P + L + + KPTPVQ+++ I+ GRD
Sbjct: 134 FDNYDNIPVDASGKDVPEPILDFSSPPLDELLMENIKLASFTKPTPVQKYSIPIVTKGRD 193
Query: 69 LMACAQTGSRKTTPFCFPIINGIMR 93
LMACAQTGS KT F FP+ + R
Sbjct: 194 LMACAQTGSGKTGGFLFPLFTELFR 218
Score = 101 (40.6 bits), Expect = 2.8e-17, Sum P(2) = 2.8e-17
Identities = 27/49 (55%), Positives = 35/49 (71%)
Query: 101 ELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
++RE+ R D L+AT RL +LLERG+VSL I +YL L EA D+ LDM
Sbjct: 280 QMREVDRGCDLLVATPGRLNDLLERGKVSLANI-KYLVLDEA-DRMLDM 326
Score = 48 (22.0 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 34 AYVPQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACA--QTGS 77
+YVP HLR++ + + + TP Q V G D A QTG+
Sbjct: 26 SYVPPHLRSRGKP-SFERSTPKQEDK----VTGGDFFRRAGRQTGN 66
>TAIR|locus:2041549 [details] [associations]
symbol:AT2G42520 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005777 "peroxisome" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005777 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC007087 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K11594 ProtClustDB:CLSN2683925
EMBL:BT004111 IPI:IPI00545939 PIR:H84854 RefSeq:NP_181780.1
UniGene:At.43442 ProteinModelPortal:Q84W89 SMR:Q84W89 IntAct:Q84W89
PaxDb:Q84W89 PRIDE:Q84W89 EnsemblPlants:AT2G42520.1 GeneID:818852
KEGG:ath:AT2G42520 GeneFarm:1013 TAIR:At2g42520 InParanoid:Q84W89
OMA:ADSENTG PhylomeDB:Q84W89 Genevestigator:Q84W89
GermOnline:AT2G42520 Uniprot:Q84W89
Length = 633
Score = 213 (80.0 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 45/84 (53%), Positives = 55/84 (65%)
Query: 18 PASSSTNTLSSPAARFAYVP--QHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQT 75
P +S + + P FA + + L R KYVKPTPVQRHA IL+ GRDLMACAQT
Sbjct: 146 PIETSGDNVPPPVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPILLEGRDLMACAQT 205
Query: 76 GSRKTTPFCFPIINGIMREYYSAR 99
GS KT FCFPII+GIM++ + R
Sbjct: 206 GSGKTAAFCFPIISGIMKDQHVQR 229
Score = 126 (49.4 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 50/136 (36%), Positives = 68/136 (50%)
Query: 16 AAPASSSTNTLSSPAARFAYVPQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQT 75
A S T P QH++ +PR + V P V IL R+L +
Sbjct: 203 AQTGSGKTAAFCFPIISGIMKDQHVQ-RPRGSRTVYPLAV------ILSPTRELASQIHD 255
Query: 76 GSRKTTPFCFPIINGIMREYYSA--RKELRELARWVDNLMATLRRLVNLLERGRVSLQMI 133
++K F + ++ Y ++LREL R VD L+AT RL +LLER RVS+QMI
Sbjct: 256 EAKK---FSYQTGVKVVVAYGGTPINQQLRELERGVDILVATPGRLNDLLERARVSMQMI 312
Query: 134 IRYLALKEAADQTLDM 149
R+LAL EA D+ LDM
Sbjct: 313 -RFLALDEA-DRMLDM 326
Score = 105 (42.0 bits), Expect = 0.00097, P = 0.00097
Identities = 28/54 (51%), Positives = 32/54 (59%)
Query: 1 MSASWAADSVFASENAAPASSSTNTLSSPAARFAYVPQHLRNKPRTYKYVKPTP 54
MSASWA V SEN SS+ N S P+ R AYVP HLRN+P + V P P
Sbjct: 1 MSASWA--DVADSENTGSGSSNQN--SHPS-RPAYVPPHLRNRPAASEPVAPLP 49
>TAIR|locus:2076436 [details] [associations]
symbol:AT3G58570 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL137082 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K11594 OMA:KYERGGN EMBL:AY049285
EMBL:BT002731 EMBL:AY088132 IPI:IPI00518094 PIR:T45677
RefSeq:NP_191416.1 UniGene:At.831 ProteinModelPortal:Q9M2F9
SMR:Q9M2F9 STRING:Q9M2F9 PaxDb:Q9M2F9 PRIDE:Q9M2F9
EnsemblPlants:AT3G58570.1 GeneID:825026 KEGG:ath:AT3G58570
GeneFarm:1031 TAIR:At3g58570 InParanoid:Q9M2F9 PhylomeDB:Q9M2F9
ProtClustDB:CLSN2915471 Genevestigator:Q9M2F9 GermOnline:AT3G58570
Uniprot:Q9M2F9
Length = 646
Score = 207 (77.9 bits), Expect = 9.4e-16, P = 9.4e-16
Identities = 45/91 (49%), Positives = 57/91 (62%)
Query: 11 FASENAAPASSSTNTLSSPAARFAYVP--QHLRNKPRTYKYVKPTPVQRHATSILVAGRD 68
F + P +S + + P FA + + L + KYVKPTPVQR+A IL AGRD
Sbjct: 126 FEAYEDIPIETSGDNVPPPVNTFAEIDLGEALNLNIQRCKYVKPTPVQRNAIPILAAGRD 185
Query: 69 LMACAQTGSRKTTPFCFPIINGIMREYYSAR 99
LMACAQTGS KT FCFPII+GIM++ + R
Sbjct: 186 LMACAQTGSGKTAAFCFPIISGIMKDQHIER 216
Score = 133 (51.9 bits), Expect = 8.3e-08, P = 8.3e-08
Identities = 51/136 (37%), Positives = 67/136 (49%)
Query: 16 AAPASSSTNTLSSPAARFAYVPQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQT 75
A S T P QH+ +PR + V P V IL R+L
Sbjct: 190 AQTGSGKTAAFCFPIISGIMKDQHIE-RPRGVRGVYPLAV------ILSPTRELACQIHD 242
Query: 76 GSRKTTPFCFPIINGIMREYYSA--RKELRELARWVDNLMATLRRLVNLLERGRVSLQMI 133
+RK F + ++ Y +++REL R VD L+AT RL +LLERGRVSLQM+
Sbjct: 243 EARK---FSYQTGVKVVVAYGGTPVNQQIRELERGVDILVATPGRLNDLLERGRVSLQMV 299
Query: 134 IRYLALKEAADQTLDM 149
R+LAL EA D+ LDM
Sbjct: 300 -RFLALDEA-DRMLDM 313
>TAIR|locus:2076351 [details] [associations]
symbol:AT3G58510 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005777 "peroxisome"
evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730
GO:GO:0005777 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL137082 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K11594
EMBL:AY088091 EMBL:AY062446 EMBL:AY114637 EMBL:AJ010463
IPI:IPI00521485 PIR:T45671 PIR:T51742 RefSeq:NP_001030884.1
RefSeq:NP_567067.1 RefSeq:NP_974455.1 UniGene:At.22801
UniGene:At.70259 ProteinModelPortal:Q8LA13 SMR:Q8LA13 IntAct:Q8LA13
STRING:Q8LA13 PaxDb:Q8LA13 PRIDE:Q8LA13 EnsemblPlants:AT3G58510.1
EnsemblPlants:AT3G58510.2 EnsemblPlants:AT3G58510.3 GeneID:825020
KEGG:ath:AT3G58510 GeneFarm:927 TAIR:At3g58510 InParanoid:Q8LA13
OMA:FCAPDEA PhylomeDB:Q8LA13 ProtClustDB:CLSN2683925
Genevestigator:Q8LA13 GermOnline:AT3G58510 Uniprot:Q8LA13
Length = 612
Score = 203 (76.5 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 44/84 (52%), Positives = 53/84 (63%)
Query: 18 PASSSTNTLSSPAARFAYVP--QHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQT 75
P +S + P FA + L R KYV+PTPVQRHA IL+A RDLMACAQT
Sbjct: 138 PVETSGGDVPPPVNTFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQT 197
Query: 76 GSRKTTPFCFPIINGIMREYYSAR 99
GS KT FCFPII+GIM++ + R
Sbjct: 198 GSGKTAAFCFPIISGIMKDQHVER 221
Score = 120 (47.3 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 51/136 (37%), Positives = 65/136 (47%)
Query: 16 AAPASSSTNTLSSPAARFAYVPQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQT 75
A S T P QH+ +PR + V P V IL R+L AC
Sbjct: 195 AQTGSGKTAAFCFPIISGIMKDQHVE-RPRGSRAVYPFAV------ILSPTREL-ACQIH 246
Query: 76 GSRKTTPFCFPIINGIMREYYSA--RKELRELARWVDNLMATLRRLVNLLERGRVSLQMI 133
K F + ++ Y ++LREL R D L+AT RL +LLER RVS+QMI
Sbjct: 247 DEAKK--FSYQTGVKVVVAYGGTPIHQQLRELERGCDILVATPGRLNDLLERARVSMQMI 304
Query: 134 IRYLALKEAADQTLDM 149
R+LAL EA D+ LDM
Sbjct: 305 -RFLALDEA-DRMLDM 318
>WB|WBGene00006888 [details] [associations]
symbol:vbh-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0032502 "developmental process"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0042006 "masculinization of hermaphroditic
germ-line" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0007281 "germ cell development" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0040010 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043186 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN EMBL:FO081614
GO:GO:0042006 RefSeq:NP_001021793.1 UniGene:Cel.16952
ProteinModelPortal:Q65XX1 SMR:Q65XX1 IntAct:Q65XX1
MINT:MINT-6669731 STRING:Q65XX1 PaxDb:Q65XX1 PRIDE:Q65XX1
EnsemblMetazoa:Y54E10A.9c.1 EnsemblMetazoa:Y54E10A.9c.2
GeneID:171888 KEGG:cel:CELE_Y54E10A.9 UCSC:Y54E10A.9a CTD:171888
WormBase:Y54E10A.9c InParanoid:Q65XX1 NextBio:873115
ArrayExpress:Q65XX1 Uniprot:Q65XX1
Length = 660
Score = 143 (55.4 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 35/82 (42%), Positives = 47/82 (57%)
Query: 14 ENAAPASSSTNTLSSPAARF---AYVPQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLM 70
EN P S +++ + F + P + N R+ Y KPTPVQ+H+ L+A RDLM
Sbjct: 123 ENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRS-GYSKPTPVQKHSIPTLLANRDLM 180
Query: 71 ACAQTGSRKTTPFCFPIINGIM 92
+CAQTGS KT F PII I+
Sbjct: 181 SCAQTGSGKTAAFLLPIIQHIL 202
Score = 75 (31.5 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 23/57 (40%), Positives = 33/57 (57%)
Query: 93 REYYSARKELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
RE Y R ++ L L+AT RL++++E+G + L RYL L EA D+ LDM
Sbjct: 260 RENY--RDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGC-RYLVLDEA-DRMLDM 312
>UNIPROTKB|C9J081 [details] [associations]
symbol:DDX3Y "ATP-dependent RNA helicase DDX3Y"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR011545 Pfam:PF00270
GO:GO:0005524 GO:GO:0005737 GO:GO:0003676 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HGNC:HGNC:2699 EMBL:AC004474
IPI:IPI00646152 HOGENOM:HOG000203858 ProteinModelPortal:C9J081
SMR:C9J081 STRING:C9J081 PRIDE:C9J081 Ensembl:ENST00000440554
ArrayExpress:C9J081 Bgee:C9J081 Uniprot:C9J081
Length = 250
Score = 138 (53.6 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 26/44 (59%), Positives = 32/44 (72%)
Query: 48 KYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGI 91
+Y +PTPVQ+HA I+ RDLMACAQTGS KT F PI++ I
Sbjct: 194 RYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQI 237
Score = 48 (22.0 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 27 SSPAARFAYVPQHLRNK 43
+S A++ Y+P HLRN+
Sbjct: 27 ASTASKGRYIPPHLRNR 43
>ZFIN|ZDB-GENE-990415-272 [details] [associations]
symbol:vasa "vasa homolog" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0043186 "P granule" evidence=IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008406 "gonad development" evidence=IEP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-990415-272 GO:GO:0005524 GO:GO:0008406
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
HSSP:Q58083 HOGENOM:HOG000268804 HOVERGEN:HBG015893 KO:K13982
EMBL:AB005147 IPI:IPI00495861 RefSeq:NP_571132.1 UniGene:Dr.559
ProteinModelPortal:O42107 SMR:O42107 STRING:O42107 PRIDE:O42107
GeneID:30263 KEGG:dre:30263 CTD:30263 InParanoid:O42107
NextBio:20806710 ArrayExpress:O42107 Bgee:O42107 Uniprot:O42107
Length = 716
Score = 165 (63.1 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 36/73 (49%), Positives = 45/73 (61%)
Query: 49 YVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYYSARKELRELARW 108
YVKPTPVQ+H I+ AGRDLMACAQTGS KT F PI+ M + +A K E+
Sbjct: 297 YVKPTPVQKHGIPIISAGRDLMACAQTGSGKTAAFLLPILQRFMTDGVAASK-FSEIQEP 355
Query: 109 VDNLMATLRRLVN 121
++A R L+N
Sbjct: 356 EAIIVAPTRELIN 368
>UNIPROTKB|Q91372 [details] [associations]
symbol:ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:8355 "Xenopus laevis" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007281 "germ cell development" evidence=IMP]
[GO:0045495 "pole plasm" evidence=IDA] [GO:0071546 "pi-body"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS] [GO:0032019
"mitochondrial cloud" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
GO:GO:0005524 GO:GO:0005635 GO:GO:0048477 GO:GO:0007283
GO:GO:0003676 GO:GO:0007281 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:P09052 HOVERGEN:HBG015893 CTD:54514 KO:K13982
GO:GO:0071547 EMBL:AF046043 PIR:I51235 RefSeq:NP_001081728.1
UniGene:Xl.256 ProteinModelPortal:Q91372 SMR:Q91372 GeneID:398019
KEGG:xla:398019 Xenbase:XB-GENE-1016814 Uniprot:Q91372
Length = 700
Score = 164 (62.8 bits), Expect = 4.4e-11, P = 4.4e-11
Identities = 39/81 (48%), Positives = 52/81 (64%)
Query: 41 RNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYYSARK 100
RN R YVK TPVQ+H+ I++AGRDLMACAQTGS KT F PI++ +M E +A +
Sbjct: 287 RNVARA-GYVKLTPVQKHSIPIIMAGRDLMACAQTGSGKTAAFLLPILSYMMNEGITASQ 345
Query: 101 ELRELARWVDNLMATLRRLVN 121
L +L ++A R L+N
Sbjct: 346 YL-QLQEPEAIIIAPTRELIN 365
>UNIPROTKB|H0Y960 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR011545
Pfam:PF00270 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HGNC:HGNC:18700 EMBL:AC016632 Ensembl:ENST00000503129
Uniprot:H0Y960
Length = 305
Score = 157 (60.3 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 40/98 (40%), Positives = 56/98 (57%)
Query: 38 QHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYYS 97
Q L N Y K TPVQ+++ I++AGRDLMACAQTGS KT F PI+ +M + +
Sbjct: 203 QTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDGIT 262
Query: 98 ARKELRELARWVDNLMATLRRLVN--LLERGRVSLQMI 133
A + +EL ++A R LVN LE + S ++
Sbjct: 263 ASR-FKELQEPECIIVAPTRELVNQIYLEARKFSFGLV 299
>UNIPROTKB|D4ADV9 [details] [associations]
symbol:Ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 IPI:IPI00782021 Ensembl:ENSRNOT00000060732
Uniprot:D4ADV9
Length = 674
Score = 162 (62.1 bits), Expect = 6.8e-11, P = 6.8e-11
Identities = 41/104 (39%), Positives = 59/104 (56%)
Query: 38 QHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYYS 97
Q L N Y K TPVQ+++ I++AGRDLMACAQTGS KT F PI+ +MR+ +
Sbjct: 271 QTLNNNIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAHMMRDGIT 330
Query: 98 ARKELRELARWVDNLMATLRRLVN--LLERGRVSLQMIIRYLAL 139
A + +EL ++A R L+N LE + S +R + +
Sbjct: 331 ASR-FKELQEPECIIVAPTRELINQIYLEARKFSFGTCVRAVVI 373
>MGI|MGI:102670 [details] [associations]
symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0007141 "male meiosis I" evidence=IMP]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0030317 "sperm motility"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
[GO:0032880 "regulation of protein localization" evidence=IMP]
[GO:0033391 "chromatoid body" evidence=ISO;IDA] [GO:0044464 "cell
part" evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0071546 "pi-body" evidence=IDA] [GO:0071547
"piP-body" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:102670 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0032880
GO:GO:0007283 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0007141
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
HOVERGEN:HBG015893 CTD:54514 KO:K13982 GO:GO:0071547 GO:GO:0000237
EMBL:AK014844 EMBL:D14859 IPI:IPI00121394 RefSeq:NP_034159.1
UniGene:Mm.12818 ProteinModelPortal:Q61496 SMR:Q61496 STRING:Q61496
PhosphoSite:Q61496 REPRODUCTION-2DPAGE:IPI00121394
REPRODUCTION-2DPAGE:Q61496 PaxDb:Q61496 PRIDE:Q61496
Ensembl:ENSMUST00000075748 GeneID:13206 KEGG:mmu:13206
UCSC:uc007rwm.2 ChiTaRS:DDX4 NextBio:283368 Bgee:Q61496
CleanEx:MM_DDX4 Genevestigator:Q61496 GermOnline:ENSMUSG00000021758
Uniprot:Q61496
Length = 702
Score = 162 (62.1 bits), Expect = 7.3e-11, P = 7.3e-11
Identities = 41/104 (39%), Positives = 59/104 (56%)
Query: 38 QHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYYS 97
Q L N Y K TPVQ+++ I++AGRDLMACAQTGS KT F PI+ +MR+ +
Sbjct: 270 QTLNNNIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAHMMRDGIT 329
Query: 98 ARKELRELARWVDNLMATLRRLVN--LLERGRVSLQMIIRYLAL 139
A + +EL ++A R L+N LE + S +R + +
Sbjct: 330 ASR-FKELQEPECIIVAPTRELINQIYLEARKFSFGTCVRAVVI 372
>UNIPROTKB|F1SLL4 [details] [associations]
symbol:LOC100626422 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR011545
Pfam:PF00270 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 EMBL:CU929824
Ensembl:ENSSSCT00000018419 OMA:DEESIFA Uniprot:F1SLL4
Length = 232
Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 33/73 (45%), Positives = 47/73 (64%)
Query: 49 YVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYYSARKELRELARW 108
Y K TPVQ+++ I++ GRDLMACAQTGS KT F PI+ +MR+ +A + +EL
Sbjct: 149 YTKLTPVQKYSIPIILGGRDLMACAQTGSGKTAAFLLPILAHMMRDGITASR-FKELQEP 207
Query: 109 VDNLMATLRRLVN 121
++A R L+N
Sbjct: 208 ECIIVAPTRELIN 220
>RGD|1308793 [details] [associations]
symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 4"
species:10116 "Rattus norvegicus" [GO:0000237 "leptotene"
evidence=IEA;ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO;ISS]
[GO:0007141 "male meiosis I" evidence=IEA;ISO] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0030317 "sperm motility"
evidence=IEA;ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO] [GO:0032880 "regulation of protein localization"
evidence=IEA;ISO] [GO:0033391 "chromatoid body" evidence=IEA;ISO]
[GO:0044464 "cell part" evidence=ISO] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA;ISO] [GO:0071546 "pi-body"
evidence=ISO;ISS] [GO:0071547 "piP-body" evidence=ISO;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1308793 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0071546 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 GO:GO:0000237 EMBL:S75275 IPI:IPI00208943 PIR:JC2534
RefSeq:NP_001071115.1 UniGene:Rn.198577 ProteinModelPortal:Q64060
SMR:Q64060 STRING:Q64060 PRIDE:Q64060 GeneID:310090 KEGG:rno:310090
NextBio:661610 Genevestigator:Q64060 Uniprot:Q64060
Length = 713
Score = 162 (62.1 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 41/104 (39%), Positives = 59/104 (56%)
Query: 38 QHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYYS 97
Q L N Y K TPVQ+++ I++AGRDLMACAQTGS KT F PI+ +MR+ +
Sbjct: 282 QTLNNNIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAHMMRDGIT 341
Query: 98 ARKELRELARWVDNLMATLRRLVN--LLERGRVSLQMIIRYLAL 139
A + +EL ++A R L+N LE + S +R + +
Sbjct: 342 ASR-FKELQEPECIIVAPTRELINQIYLEARKFSFGTCVRAVVI 384
>UNIPROTKB|Q64060 [details] [associations]
symbol:Ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1308793 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0071546 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 GO:GO:0000237 EMBL:S75275 IPI:IPI00208943 PIR:JC2534
RefSeq:NP_001071115.1 UniGene:Rn.198577 ProteinModelPortal:Q64060
SMR:Q64060 STRING:Q64060 PRIDE:Q64060 GeneID:310090 KEGG:rno:310090
NextBio:661610 Genevestigator:Q64060 Uniprot:Q64060
Length = 713
Score = 162 (62.1 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 41/104 (39%), Positives = 59/104 (56%)
Query: 38 QHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYYS 97
Q L N Y K TPVQ+++ I++AGRDLMACAQTGS KT F PI+ +MR+ +
Sbjct: 282 QTLNNNIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAHMMRDGIT 341
Query: 98 ARKELRELARWVDNLMATLRRLVN--LLERGRVSLQMIIRYLAL 139
A + +EL ++A R L+N LE + S +R + +
Sbjct: 342 ASR-FKELQEPECIIVAPTRELINQIYLEARKFSFGTCVRAVVI 384
>UNIPROTKB|Q90ZF6 [details] [associations]
symbol:olvas "VASA" species:8090 "Oryzias latipes"
[GO:0043186 "P granule" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043186 HSSP:Q58083 HOVERGEN:HBG015893 EMBL:AB063484
RefSeq:NP_001098146.1 UniGene:Ola.181 ProteinModelPortal:Q90ZF6
SMR:Q90ZF6 GeneID:100049226 CTD:100049226 Uniprot:Q90ZF6
Length = 617
Score = 161 (61.7 bits), Expect = 7.7e-11, P = 7.7e-11
Identities = 42/103 (40%), Positives = 57/103 (55%)
Query: 21 SSTNTLSSPAARF--AYVPQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSR 78
S TN L + F A + + L N YVKPTPVQ++ I+ AGRDLMACAQTGS
Sbjct: 172 SGTN-LPAAIMTFEEAKLCESLENNISRSGYVKPTPVQKYGLPIISAGRDLMACAQTGSG 230
Query: 79 KTTPFCFPIINGIMREYYSARKELRELARWVDNLMATLRRLVN 121
KT F PI+ +M + +A + E+ ++A R L+N
Sbjct: 231 KTAAFLLPILQQLMADGVAASR-FSEIQEPEAVIVAPTRELIN 272
>UNIPROTKB|D6RCM4 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 HGNC:HGNC:18700 EMBL:AC016632 IPI:IPI00953956
ProteinModelPortal:D6RCM4 SMR:D6RCM4 Ensembl:ENST00000506511
ArrayExpress:D6RCM4 Bgee:D6RCM4 Uniprot:D6RCM4
Length = 518
Score = 159 (61.0 bits), Expect = 9.5e-11, P = 9.5e-11
Identities = 41/104 (39%), Positives = 58/104 (55%)
Query: 38 QHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYYS 97
Q L N Y K TPVQ+++ I++AGRDLMACAQTGS KT F PI+ +M + +
Sbjct: 277 QTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDGIT 336
Query: 98 ARKELRELARWVDNLMATLRRLVN--LLERGRVSLQMIIRYLAL 139
A + +EL ++A R LVN LE + S +R + +
Sbjct: 337 ASR-FKELQEPECIIVAPTRELVNQIYLEARKFSFGTCVRAVVI 379
>UNIPROTKB|D6RDK4 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 CTD:54514 KO:K13982 RefSeq:NP_001160005.1
UniGene:Hs.223581 GeneID:54514 KEGG:hsa:54514 HGNC:HGNC:18700
GenomeRNAi:54514 NextBio:56900 EMBL:AC016632 IPI:IPI00953956
ProteinModelPortal:D6RDK4 SMR:D6RDK4 PRIDE:D6RDK4
Ensembl:ENST00000514278 UCSC:uc010ivz.3 ArrayExpress:D6RDK4
Bgee:D6RDK4 Uniprot:D6RDK4
Length = 704
Score = 159 (61.0 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 41/104 (39%), Positives = 58/104 (55%)
Query: 38 QHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYYS 97
Q L N Y K TPVQ+++ I++AGRDLMACAQTGS KT F PI+ +M + +
Sbjct: 277 QTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDGIT 336
Query: 98 ARKELRELARWVDNLMATLRRLVN--LLERGRVSLQMIIRYLAL 139
A + +EL ++A R LVN LE + S +R + +
Sbjct: 337 ASR-FKELQEPECIIVAPTRELVNQIYLEARKFSFGTCVRAVVI 379
>UNIPROTKB|Q6GWX0 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9823 "Sus scrofa" [GO:0033391 "chromatoid body"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] [GO:0071546 "pi-body" evidence=ISS]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 EMBL:AY626785 RefSeq:NP_001001910.1 UniGene:Ssc.42782
ProteinModelPortal:Q6GWX0 SMR:Q6GWX0 STRING:Q6GWX0 GeneID:431672
KEGG:ssc:431672 Uniprot:Q6GWX0
Length = 722
Score = 159 (61.0 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 41/104 (39%), Positives = 58/104 (55%)
Query: 38 QHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYYS 97
Q L N Y K TPVQ+++ I++AGRDLMACAQTGS KT F PI+ +M + +
Sbjct: 295 QTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDGIT 354
Query: 98 ARKELRELARWVDNLMATLRRLVN--LLERGRVSLQMIIRYLAL 139
A + +EL ++A R LVN LE + S +R + +
Sbjct: 355 ASR-FKELQEPECIIVAPTRELVNQIYLEARKFSFGTCVRAVVI 397
>UNIPROTKB|Q9NQI0 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0000237
"leptotene" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0032880 "regulation of protein
localization" evidence=IEA] [GO:0033391 "chromatoid body"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IMP]
[GO:0071546 "pi-body" evidence=ISS] [GO:0071547 "piP-body"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 EMBL:CH471123 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0007141
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 HOVERGEN:HBG015893 CTD:54514 KO:K13982
OrthoDB:EOG4W6NVF GO:GO:0071547 EMBL:AY004154 EMBL:AF262962
EMBL:AK292417 EMBL:BC047455 EMBL:BC088362 EMBL:AL137462
IPI:IPI00071483 IPI:IPI00456933 PIR:T46407 RefSeq:NP_001136021.1
RefSeq:NP_001160005.1 RefSeq:NP_077726.1 UniGene:Hs.223581
ProteinModelPortal:Q9NQI0 SMR:Q9NQI0 IntAct:Q9NQI0 STRING:Q9NQI0
PhosphoSite:Q9NQI0 DMDM:20138033 REPRODUCTION-2DPAGE:IPI00456933
PaxDb:Q9NQI0 PRIDE:Q9NQI0 Ensembl:ENST00000353507
Ensembl:ENST00000354991 Ensembl:ENST00000505374 GeneID:54514
KEGG:hsa:54514 UCSC:uc003jqg.4 UCSC:uc003jqh.4
GeneCards:GC05P055069 HGNC:HGNC:18700 HPA:CAB026170 HPA:HPA037763
HPA:HPA037764 MIM:605281 neXtProt:NX_Q9NQI0 PharmGKB:PA38646
InParanoid:Q9NQI0 OMA:RDAGESN PhylomeDB:Q9NQI0 GenomeRNAi:54514
NextBio:56900 ArrayExpress:Q9NQI0 Bgee:Q9NQI0 CleanEx:HS_DDX4
Genevestigator:Q9NQI0 GermOnline:ENSG00000152670 GO:GO:0000237
Uniprot:Q9NQI0
Length = 724
Score = 159 (61.0 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 41/104 (39%), Positives = 58/104 (55%)
Query: 38 QHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYYS 97
Q L N Y K TPVQ+++ I++AGRDLMACAQTGS KT F PI+ +M + +
Sbjct: 297 QTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDGIT 356
Query: 98 ARKELRELARWVDNLMATLRRLVN--LLERGRVSLQMIIRYLAL 139
A + +EL ++A R LVN LE + S +R + +
Sbjct: 357 ASR-FKELQEPECIIVAPTRELVNQIYLEARKFSFGTCVRAVVI 399
>UNIPROTKB|E2RMU5 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0033391 "chromatoid body" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0030317 "sperm motility" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000237
"leptotene" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0032880 GO:GO:0007283
GO:GO:0003676 GO:GO:0030317 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
OMA:RDAGESN GO:GO:0000237 EMBL:AAEX03001439
Ensembl:ENSCAFT00000011062 Uniprot:E2RMU5
Length = 728
Score = 158 (60.7 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 40/104 (38%), Positives = 58/104 (55%)
Query: 38 QHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYYS 97
Q L N Y K TPVQ+++ I++AGRDLMACAQTGS KT F PI+ +M + +
Sbjct: 298 QTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDGIT 357
Query: 98 ARKELRELARWVDNLMATLRRLVN--LLERGRVSLQMIIRYLAL 139
A + +EL ++A R L+N LE + S +R + +
Sbjct: 358 ASR-FKELQEPECIIVAPTRELINQIYLEARKFSFGTCVRAVVI 400
>UNIPROTKB|Q4R5S7 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9541 "Macaca fascicularis" [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0071546 "pi-body" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:0071547 EMBL:AB169466
ProteinModelPortal:Q4R5S7 SMR:Q4R5S7 Uniprot:Q4R5S7
Length = 725
Score = 157 (60.3 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 43/106 (40%), Positives = 60/106 (56%)
Query: 38 QHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYYS 97
Q L N Y K TPVQ+++ I++AGRDLMACAQTGS KT F PI+ +M + +
Sbjct: 298 QTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDGIT 357
Query: 98 AR--KELRELARWVDNLMATLRRLVN--LLERGRVSLQMIIRYLAL 139
A KEL+E + ++A R LVN LE + S +R + +
Sbjct: 358 ASCFKELQE-PECI--IVAPTRELVNQIYLEARKFSFGTCVRAVVI 400
>UNIPROTKB|B4E3C4 [details] [associations]
symbol:DDX3X "cDNA FLJ52848, highly similar to
ATP-dependent RNA helicase DDX3X (EC 3.6.1.-)" species:9606 "Homo
sapiens" [GO:0004386 "helicase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] GO:GO:0005737 GO:GO:0004386
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893 EMBL:AL391647
EMBL:Z93015 UniGene:Hs.380774 HGNC:HGNC:2745 ChiTaRS:DDX3X
EMBL:AK304661 IPI:IPI00909544 SMR:B4E3C4 STRING:B4E3C4
Ensembl:ENST00000542215 HOGENOM:HOG000203858 Uniprot:B4E3C4
Length = 308
Score = 115 (45.5 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 26/57 (45%), Positives = 32/57 (56%)
Query: 48 KYVKPTPVQRHATSILVAGRDLMACAQTGSRKT-TPFCFPIINGIMREYYSARKELR 103
+Y +PTPVQ+HA I+ RDLMACAQTG K P P + GI +LR
Sbjct: 243 RYTRPTPVQKHAIPIIKEKRDLMACAQTGKWKVWAPQTIPNLLGISTNERVGSTDLR 299
Score = 55 (24.4 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 20 SSSTNTLSSPAARFAYVPQHLRNKPRT 46
SS + S A++ Y+P HLRN+ T
Sbjct: 67 SSDNQSGGSTASKGRYIPPHLRNREAT 93
>UNIPROTKB|F1MYC6 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9913 "Bos taurus" [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0033391 "chromatoid body"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007141 "male
meiosis I" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000237 "leptotene" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
GO:GO:0032880 GO:GO:0007283 GO:GO:0003676 GO:GO:0030317
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 IPI:IPI00689085 UniGene:Bt.35994
OMA:RDAGESN GO:GO:0000237 EMBL:DAAA02050339 EMBL:DAAA02050337
EMBL:DAAA02050338 EMBL:JX437185 Ensembl:ENSBTAT00000011682
Uniprot:F1MYC6
Length = 729
Score = 156 (60.0 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 40/104 (38%), Positives = 57/104 (54%)
Query: 38 QHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYYS 97
Q L N Y K TPVQ+++ I+ GRDLMACAQTGS KT F PI+ +MR+ +
Sbjct: 299 QTLNNNIAKAGYTKLTPVQKYSIPIIQGGRDLMACAQTGSGKTAAFLLPILAHMMRDGIT 358
Query: 98 ARKELRELARWVDNLMATLRRLVN--LLERGRVSLQMIIRYLAL 139
A + +EL ++A R L+N LE + S +R + +
Sbjct: 359 ASR-FKELQEPECIIVAPTRELINQIYLEARKFSFGTCVRAVVI 401
>UNIPROTKB|Q5W5U4 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9913 "Bos taurus" [GO:0033391 "chromatoid body"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] [GO:0071546 "pi-body" evidence=ISS]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 HOVERGEN:HBG015893 EMBL:AF541971
IPI:IPI00689085 RefSeq:NP_001007820.1 UniGene:Bt.35994
ProteinModelPortal:Q5W5U4 SMR:Q5W5U4 STRING:Q5W5U4 PRIDE:Q5W5U4
GeneID:493725 KEGG:bta:493725 CTD:54514 InParanoid:Q5W5U4 KO:K13982
OrthoDB:EOG4W6NVF NextBio:20865468 GO:GO:0071547 Uniprot:Q5W5U4
Length = 729
Score = 156 (60.0 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 40/104 (38%), Positives = 57/104 (54%)
Query: 38 QHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYYS 97
Q L N Y K TPVQ+++ I+ GRDLMACAQTGS KT F PI+ +MR+ +
Sbjct: 299 QTLNNNIAKAGYTKLTPVQKYSIPIIQGGRDLMACAQTGSGKTAAFLLPILAHMMRDGIT 358
Query: 98 ARKELRELARWVDNLMATLRRLVN--LLERGRVSLQMIIRYLAL 139
A + +EL ++A R L+N LE + S +R + +
Sbjct: 359 ASR-FKELQEPECIIVAPTRELINQIYLEARKFSFGTCVRAVVI 401
>DICTYBASE|DDB_G0288501 [details] [associations]
symbol:ddx42 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0288501 GO:GO:0005524 GO:GO:0005634
GenomeReviews:CM000154_GR GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AAFI02000112 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
KO:K12835 RefSeq:XP_636700.1 ProteinModelPortal:Q54IV3
STRING:Q54IV3 EnsemblProtists:DDB0233432 GeneID:8626657
KEGG:ddi:DDB_G0288501 OMA:DRDKRGG Uniprot:Q54IV3
Length = 986
Score = 115 (45.5 bits), Expect = 4.3e-10, Sum P(3) = 4.3e-10
Identities = 23/45 (51%), Positives = 32/45 (71%)
Query: 52 PTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYY 96
PTP+Q+ A I ++GRDL+A A+TGS KT F +P I+ IM + Y
Sbjct: 328 PTPIQKQAIPIALSGRDLIAIAKTGSGKTATFIWPSISHIMDQPY 372
Score = 53 (23.7 bits), Expect = 4.3e-10, Sum P(3) = 4.3e-10
Identities = 15/52 (28%), Positives = 29/52 (55%)
Query: 97 SARKELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLD 148
S +++ +EL + ++AT RL+++++ L + YL L EA D+ D
Sbjct: 417 SKQQQCKELKAGCEIIVATPGRLIDMIKLKATKLNRV-SYLVLDEA-DKMFD 466
Score = 34 (17.0 bits), Expect = 4.3e-10, Sum P(3) = 4.3e-10
Identities = 10/22 (45%), Positives = 10/22 (45%)
Query: 8 DSVFASENAAPASSSTNTLSSP 29
D F S N P SS T SP
Sbjct: 97 DDYFFS-NVPPKSSMTTLNKSP 117
>UNIPROTKB|B2C6E9 [details] [associations]
symbol:B2C6E9 "VASA" species:9337 "Trichosurus vulpecula"
[GO:0033391 "chromatoid body" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0033391 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 EMBL:EU278597 Uniprot:B2C6E9
Length = 704
Score = 152 (58.6 bits), Expect = 8.6e-10, P = 8.6e-10
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 38 QHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYYS 97
Q L N Y K TPVQ++ I++AGRDLMACAQTGS KT F PI+ +MR+ +
Sbjct: 275 QTLNNDITKAGYTKLTPVQKYGIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMRDGVT 334
Query: 98 ARKELRELARWVDNLMATLRRLVN--LLERGRVSLQMIIR 135
A + ++ ++A R L+N LE + S +R
Sbjct: 335 ASR-FKDQQEPECIIVAPTRELINQIFLEARKFSFGTCVR 373
>ASPGD|ASPL0000006660 [details] [associations]
symbol:AN5931 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 EMBL:BN001301
EMBL:AACD01000101 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 RefSeq:XP_663535.1
ProteinModelPortal:Q5B0J9 STRING:Q5B0J9 PRIDE:Q5B0J9
EnsemblFungi:CADANIAT00007099 GeneID:2870997 KEGG:ani:AN5931.2
OMA:IDAMSGY OrthoDB:EOG47SWP6 Uniprot:Q5B0J9
Length = 563
Score = 102 (41.0 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 18/52 (34%), Positives = 32/52 (61%)
Query: 37 PQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPII 88
PQ++ ++ + + KPT +Q + ++GRD++ A+TGS KT +C P I
Sbjct: 148 PQYVLSEVKAQGFEKPTAIQSQGWPMALSGRDVVGIAETGSGKTLSYCLPAI 199
Score = 93 (37.8 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 22/49 (44%), Positives = 35/49 (71%)
Query: 101 ELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
++R+L+R V+ +AT RL+++LE GR +L+ + YL L EA D+ LDM
Sbjct: 256 QIRDLSRGVEVCIATPGRLIDMLEAGRTNLRRVT-YLVLDEA-DRMLDM 302
>WB|WBGene00002244 [details] [associations]
symbol:laf-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042006
"masculinization of hermaphroditic germ-line" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0040007 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
HOGENOM:HOG000268804 KO:K11594 GO:GO:0042006 EMBL:FO081822
EMBL:FJ348231 RefSeq:NP_001254859.1 UniGene:Cel.25045
ProteinModelPortal:D0PV95 SMR:D0PV95 GeneID:190611
KEGG:cel:CELE_Y71H2AM.19 CTD:190611 WormBase:Y71H2AM.19b
ArrayExpress:D0PV95 Uniprot:D0PV95
Length = 708
Score = 149 (57.5 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 29/79 (36%), Positives = 48/79 (60%)
Query: 18 PASSSTNTLSSPAARFAYVPQH--LRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQT 75
P ++ + + P + F+ + H + +T Y +PTPVQ+++ L GRDLM+CAQT
Sbjct: 218 PVEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQT 277
Query: 76 GSRKTTPFCFPIINGIMRE 94
GS KT F P++N I+++
Sbjct: 278 GSGKTAAFLVPLVNAILQD 296
>UNIPROTKB|Q3MSQ8 [details] [associations]
symbol:ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:45623 "Pelophylax lessonae" [GO:0071546 "pi-body"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0030154 GO:GO:0048477 GO:GO:0007283 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071546
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
HOVERGEN:HBG015893 GO:GO:0071547 EMBL:AJ841700
ProteinModelPortal:Q3MSQ8 SMR:Q3MSQ8 Uniprot:Q3MSQ8
Length = 724
Score = 149 (57.5 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 36/75 (48%), Positives = 48/75 (64%)
Query: 49 YVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYY--SARKELRELA 106
YVK TP+Q+H+ I+VAGRDLMACAQTGS KT F PI+ +M + SA + L+E
Sbjct: 306 YVKLTPIQKHSIPIIVAGRDLMACAQTGSGKTAAFLLPILAHLMVKGVESSAFQTLKEPE 365
Query: 107 RWVDNLMATLRRLVN 121
+ +A R L+N
Sbjct: 366 AII---VAPTRELIN 377
>UNIPROTKB|F1NL04 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000237 "leptotene" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0030317 "sperm motility" evidence=IEA] [GO:0032880 "regulation
of protein localization" evidence=IEA] [GO:0033391 "chromatoid
body" evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0003676 GO:GO:0030317
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 GO:GO:0000237 EMBL:AADN02054551
EMBL:AADN02054552 EMBL:AADN02054553 IPI:IPI00578446
Ensembl:ENSGALT00000038830 Uniprot:F1NL04
Length = 542
Score = 147 (56.8 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 37/97 (38%), Positives = 57/97 (58%)
Query: 26 LSSPAARFAYVPQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCF 85
L+ A FA Q LR Y K TPVQ+H+ ++ AGRDLM+CAQTGS KT F
Sbjct: 167 LAFEEANFA---QTLRKNISKTGYSKLTPVQKHSIPVIQAGRDLMSCAQTGSGKTAAFLL 223
Query: 86 PIINGIMREYYSARK-ELRELARWVDNLMATLRRLVN 121
PI++ +M++ +A + ++ + + ++A R L+N
Sbjct: 224 PIVDRMMKDGVTASAFQKQQEPQCI--IVAPTRELIN 258
>UNIPROTKB|F1N991 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000237 "leptotene"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male
meiosis I" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0033391 "chromatoid body" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0032880 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0033391 GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 GO:GO:0000237
OMA:GINFDKF EMBL:AADN02054551 EMBL:AADN02054552 EMBL:AADN02054553
IPI:IPI00819436 ProteinModelPortal:F1N991
Ensembl:ENSGALT00000023724 Uniprot:F1N991
Length = 568
Score = 147 (56.8 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 37/97 (38%), Positives = 57/97 (58%)
Query: 26 LSSPAARFAYVPQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCF 85
L+ A FA Q LR Y K TPVQ+H+ ++ AGRDLM+CAQTGS KT F
Sbjct: 167 LAFEEANFA---QTLRKNISKTGYSKLTPVQKHSIPVIQAGRDLMSCAQTGSGKTAAFLL 223
Query: 86 PIINGIMREYYSARK-ELRELARWVDNLMATLRRLVN 121
PI++ +M++ +A + ++ + + ++A R L+N
Sbjct: 224 PIVDRMMKDGVTASAFQKQQEPQCI--IVAPTRELIN 258
>CGD|CAL0003204 [details] [associations]
symbol:DBP2 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0003204 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000245
EMBL:AACQ01000246 RefSeq:XP_710694.1 RefSeq:XP_710708.1
ProteinModelPortal:Q59LU0 PRIDE:Q59LU0 GeneID:3647692
GeneID:3647705 KEGG:cal:CaO19.171 KEGG:cal:CaO19.7804 KO:K12823
Uniprot:Q59LU0
Length = 562
Score = 100 (40.3 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 24/80 (30%), Positives = 38/80 (47%)
Query: 11 FASENAAPASSSTNTLSSPAARF--AYVPQHLRNKPRTYKYVKPTPVQRHATSILVAGRD 68
F EN + + P F A P ++ + + + KPTP+Q + ++GRD
Sbjct: 109 FRKENEMTVKG--HDIPHPITTFDEAGFPDYVLQEVKDQGFPKPTPIQCQGWPMALSGRD 166
Query: 69 LMACAQTGSRKTTPFCFPII 88
++ A TGS KT +C P I
Sbjct: 167 MIGIAATGSGKTLSYCLPSI 186
Score = 93 (37.8 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 22/49 (44%), Positives = 35/49 (71%)
Query: 101 ELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
++R+LAR V+ +AT RL+++LE G+ +L+ + YL L EA D+ LDM
Sbjct: 243 QIRDLARGVEICIATPGRLIDMLEAGKTNLKRVT-YLVLDEA-DRMLDM 289
>UNIPROTKB|Q0C354 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
RefSeq:YP_759839.1 ProteinModelPortal:Q0C354 STRING:Q0C354
GeneID:4290097 KEGG:hne:HNE_1118 PATRIC:32215041 OMA:KHGSEKL
BioCyc:HNEP228405:GI69-1155-MONOMER Uniprot:Q0C354
Length = 464
Score = 108 (43.1 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 49 YVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMR 93
Y PTP+Q A +++ GRD++ AQTG+ KT F PI++ + R
Sbjct: 27 YTAPTPIQEQAIPLVIQGRDIVGLAQTGTGKTLAFAAPILDRLSR 71
Score = 75 (31.5 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 101 ELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
++R+L R L+AT RL++L+E+ VSL + L L EA DQ LD+
Sbjct: 123 QIRQLERGAHILVATPGRLIDLMEQRAVSLDKV-ETLILDEA-DQMLDL 169
>TAIR|locus:2075034 [details] [associations]
symbol:AT3G09720 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009220
"pyrimidine ribonucleotide biosynthetic process" evidence=RCA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003723 EMBL:AC016661
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000242486 KO:K14779 OMA:NVMKQSG EMBL:BT005833
EMBL:AK227326 IPI:IPI00542757 RefSeq:NP_187583.2 UniGene:At.40050
ProteinModelPortal:Q84TG1 SMR:Q84TG1 STRING:Q84TG1 PaxDb:Q84TG1
PRIDE:Q84TG1 EnsemblPlants:AT3G09720.1 GeneID:820129
KEGG:ath:AT3G09720 KEGG:dosa:Os07t0647900-01 GeneFarm:1036
TAIR:At3g09720 InParanoid:Q84TG1 PhylomeDB:Q84TG1
ProtClustDB:CLSN2690529 Genevestigator:Q84TG1 GermOnline:AT3G09720
Uniprot:Q84TG1
Length = 541
Score = 115 (45.5 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 31/82 (37%), Positives = 42/82 (51%)
Query: 12 ASENAAPASSSTNTLSSPAARFAYVPQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMA 71
+ N P S LSS Y+ LRN + +PTP+QR A IL++GR+ A
Sbjct: 128 SGNNIPPPLKSFAELSSRYGCEGYI---LRNLAEL-GFKEPTPIQRQAIPILLSGRECFA 183
Query: 72 CAQTGSRKTTPFCFPIINGIMR 93
CA TGS KT F P++ + R
Sbjct: 184 CAPTGSGKTFAFICPMLIKLKR 205
Score = 52 (23.4 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 108 WVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDMAL 151
W D L++T RL ++ ++ L + YL L E+ D+ + +L
Sbjct: 258 WCDVLISTPMRLKRAIKAKKIDLSKV-EYLVLDES-DKLFEQSL 299
>POMBASE|SPCC1795.11 [details] [associations]
symbol:sum3 "translation initiation RNA helicase Sum3"
species:4896 "Schizosaccharomyces pombe" [GO:0002183 "cytoplasmic
translational initiation" evidence=IMP] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0010628
"positive regulation of gene expression" evidence=IMP] [GO:0031047
"gene silencing by RNA" evidence=IDA] [GO:0031137 "regulation of
conjugation with cellular fusion" evidence=IGI] [GO:0071470
"cellular response to osmotic stress" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPCC1795.11 GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0051301 GO:GO:0007067 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0071470 GO:GO:0010628 GO:GO:0031047
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0031137 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0002183 HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4
OMA:KYERGGN EMBL:AF025536 EMBL:AF084222 EMBL:AB012389 EMBL:AJ237697
EMBL:AB027871 PIR:T43543 RefSeq:NP_588033.1
ProteinModelPortal:O13370 SMR:O13370 IntAct:O13370
MINT:MINT-4666622 STRING:O13370 PRIDE:O13370
EnsemblFungi:SPCC1795.11.1 GeneID:2538689 KEGG:spo:SPCC1795.11
NextBio:20799875 Uniprot:O13370
Length = 636
Score = 145 (56.1 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 30/63 (47%), Positives = 39/63 (61%)
Query: 29 PAARFAYVP--QHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFP 86
P F P HL + Y +PTPVQ+++ I+ +GRDLMACAQTGS KT F FP
Sbjct: 167 PVNEFTSPPLNSHLLQNIKLSGYTQPTPVQKNSIPIVTSGRDLMACAQTGSGKTAGFLFP 226
Query: 87 IIN 89
I++
Sbjct: 227 ILS 229
Score = 108 (43.1 bits), Expect = 0.00031, P = 0.00031
Identities = 36/99 (36%), Positives = 57/99 (57%)
Query: 54 PVQRHATSILVAG-RDLMACAQTGSRKTTPFCFPIINGIMREYYSA--RKELRELARWVD 110
P + + T++++A R+L+ SRK FC+ Y A R ++R++ + D
Sbjct: 251 PRKAYPTTLILAPTRELVCQIHEESRK---FCYRSWVRPCAVYGGADIRAQIRQIDQGCD 307
Query: 111 NLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
L AT RLV+L++RGR+SL I ++L L EA D+ LDM
Sbjct: 308 LLSATPGRLVDLIDRGRISLANI-KFLVLDEA-DRMLDM 344
>WB|WBGene00001600 [details] [associations]
symbol:glh-3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0043186 "P granule" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008432 "JUN kinase
binding" evidence=IPI] [GO:0017151 "DEAD/H-box RNA helicase
binding" evidence=IPI] [GO:0043621 "protein self-association"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:4.10.60.10 SUPFAM:SSF57756
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
EMBL:FO080197 GeneTree:ENSGT00620000087942 EMBL:AF079509 PIR:T15231
RefSeq:NP_491681.1 UniGene:Cel.19392 ProteinModelPortal:O01836
SMR:O01836 IntAct:O01836 STRING:O01836 PaxDb:O01836
EnsemblMetazoa:B0414.6.1 EnsemblMetazoa:B0414.6.2 GeneID:172245
KEGG:cel:CELE_B0414.6 UCSC:B0414.6 CTD:172245 WormBase:B0414.6
InParanoid:O01836 NextBio:874651 Uniprot:O01836
Length = 720
Score = 128 (50.1 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 22/59 (37%), Positives = 37/59 (62%)
Query: 36 VPQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMRE 94
+PQ +R Y + TP+Q++ ++ G+D++ACAQTGS KT F PI++ ++ E
Sbjct: 305 IPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMSRLILE 363
Score = 41 (19.5 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 10/22 (45%), Positives = 11/22 (50%)
Query: 8 DSVFASENAAPASSSTNTLSSP 29
D+VF S N S ST L P
Sbjct: 91 DNVFHSNNNLHGSPSTTELECP 112
>UNIPROTKB|O01836 [details] [associations]
symbol:glh-3 "ATP-dependent RNA helicase glh-3"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:4.10.60.10 SUPFAM:SSF57756
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
EMBL:FO080197 GeneTree:ENSGT00620000087942 EMBL:AF079509 PIR:T15231
RefSeq:NP_491681.1 UniGene:Cel.19392 ProteinModelPortal:O01836
SMR:O01836 IntAct:O01836 STRING:O01836 PaxDb:O01836
EnsemblMetazoa:B0414.6.1 EnsemblMetazoa:B0414.6.2 GeneID:172245
KEGG:cel:CELE_B0414.6 UCSC:B0414.6 CTD:172245 WormBase:B0414.6
InParanoid:O01836 NextBio:874651 Uniprot:O01836
Length = 720
Score = 128 (50.1 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 22/59 (37%), Positives = 37/59 (62%)
Query: 36 VPQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMRE 94
+PQ +R Y + TP+Q++ ++ G+D++ACAQTGS KT F PI++ ++ E
Sbjct: 305 IPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMSRLILE 363
Score = 41 (19.5 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 10/22 (45%), Positives = 11/22 (50%)
Query: 8 DSVFASENAAPASSSTNTLSSP 29
D+VF S N S ST L P
Sbjct: 91 DNVFHSNNNLHGSPSTTELECP 112
>FB|FBgn0035720 [details] [associations]
symbol:CG10077 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005875
EMBL:AE014296 GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779 KO:K12823
GeneTree:ENSGT00660000095174 HSSP:P10081 UniGene:Dm.7301
GeneID:38756 KEGG:dme:Dmel_CG10077 FlyBase:FBgn0035720
ChiTaRS:CG10077 GenomeRNAi:38756 NextBio:810234 EMBL:AY102660
RefSeq:NP_648062.2 SMR:Q8MZI3 IntAct:Q8MZI3 MINT:MINT-863686
STRING:Q8MZI3 EnsemblMetazoa:FBtr0076940 EnsemblMetazoa:FBtr0333083
UCSC:CG10077-RA InParanoid:Q8MZI3 OMA:WRACAIH Uniprot:Q8MZI3
Length = 818
Score = 104 (41.7 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 20/52 (38%), Positives = 30/52 (57%)
Query: 37 PQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPII 88
P ++ N+ R + KPT +Q I ++GRDL+ AQTGS KT + P +
Sbjct: 165 PDYVMNEIRKQGFAKPTAIQAQGWPIAMSGRDLVGVAQTGSGKTLAYVLPAV 216
Score = 88 (36.0 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 23/50 (46%), Positives = 33/50 (66%)
Query: 100 KELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
++ R+L R V+ ++AT RL++ LERG SL+ YL L EA D+ LDM
Sbjct: 272 QQARDLERGVEIVIATPGRLIDFLERGTTSLKRCT-YLVLDEA-DRMLDM 319
>UNIPROTKB|E1C2R8 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009791 "post-embryonic
development" evidence=IEA] [GO:0072358 "cardiovascular system
development" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
OMA:QQFPQPP EMBL:AADN02006148 EMBL:AADN02006147 IPI:IPI00594176
Ensembl:ENSGALT00000020002 Uniprot:E1C2R8
Length = 496
Score = 102 (41.0 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 21/63 (33%), Positives = 34/63 (53%)
Query: 37 PQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYY 96
PQ++ + + +PTP+Q + ++GRD++ AQTGS KT + P I I + Y
Sbjct: 98 PQYVMDALMDQNFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPY 157
Query: 97 SAR 99
R
Sbjct: 158 LER 160
Score = 82 (33.9 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 101 ELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
++R+L R V+ +AT RL++ LE G+ +L+ YL L EA D+ LDM
Sbjct: 206 QIRDLERGVEICIATPGRLIDFLEAGKTNLRRCT-YLVLDEA-DRMLDM 252
>UNIPROTKB|A7E307 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072358 "cardiovascular system development"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 GeneTree:ENSGT00660000095174
CTD:10521 HOVERGEN:HBG015893 KO:K13178 OrthoDB:EOG4QRH3N
GO:GO:0072358 EMBL:DAAA02014661 EMBL:DAAA02014662 EMBL:BC151648
IPI:IPI00914517 RefSeq:NP_001095463.1 UniGene:Bt.91623
Ensembl:ENSBTAT00000037682 GeneID:514323 KEGG:bta:514323
InParanoid:A7E307 OMA:QQFPQPP NextBio:20871275 Uniprot:A7E307
Length = 650
Score = 102 (41.0 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 23/70 (32%), Positives = 36/70 (51%)
Query: 30 AARFAYVPQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIIN 89
A A PQ++ + + +PTP+Q + ++GRD++ AQTGS KT + P I
Sbjct: 93 AFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIV 152
Query: 90 GIMREYYSAR 99
I + Y R
Sbjct: 153 HINHQPYLER 162
Score = 82 (33.9 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 101 ELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
++R+L R V+ +AT RL++ LE G+ +L+ YL L EA D+ LDM
Sbjct: 208 QIRDLERGVEICIATPGRLIDFLESGKTNLRRCT-YLVLDEA-DRMLDM 254
>UNIPROTKB|E2RJ60 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:AAEX03007314
Ensembl:ENSCAFT00000037931 Uniprot:E2RJ60
Length = 650
Score = 102 (41.0 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 23/70 (32%), Positives = 36/70 (51%)
Query: 30 AARFAYVPQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIIN 89
A A PQ++ + + +PTP+Q + ++GRD++ AQTGS KT + P I
Sbjct: 93 AFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIV 152
Query: 90 GIMREYYSAR 99
I + Y R
Sbjct: 153 HINHQPYLER 162
Score = 82 (33.9 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 101 ELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
++R+L R V+ +AT RL++ LE G+ +L+ YL L EA D+ LDM
Sbjct: 208 QIRDLERGVEICIATPGRLIDFLESGKTNLRRCT-YLVLDEA-DRMLDM 254
>MGI|MGI:1914290 [details] [associations]
symbol:Ddx17 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 17"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0030331 "estrogen receptor binding"
evidence=ISO] [GO:0033148 "positive regulation of intracellular
estrogen receptor signaling pathway" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0072358 "cardiovascular system
development" evidence=IMP] [GO:2001014 "regulation of skeletal
muscle cell differentiation" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1914290
GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0045944
GO:GO:0006351 GO:GO:0003723 GO:GO:0003713 GO:GO:0009791
GO:GO:0033148 GO:GO:0030331 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 CTD:10521 HOVERGEN:HBG015893 KO:K13178
ChiTaRS:DDX17 GO:GO:2001014 EMBL:AK039888 EMBL:BC062910
EMBL:BC096036 IPI:IPI00396797 IPI:IPI00405364 RefSeq:NP_001035277.1
RefSeq:NP_951061.1 RefSeq:NP_951062.1 UniGene:Mm.29644
UniGene:Mm.298199 ProteinModelPortal:Q501J6 SMR:Q501J6
IntAct:Q501J6 STRING:Q501J6 PhosphoSite:Q501J6
REPRODUCTION-2DPAGE:IPI00405364 PaxDb:Q501J6 PRIDE:Q501J6
GeneID:67040 KEGG:mmu:67040 UCSC:uc007wtq.1 UCSC:uc007wtt.1
InParanoid:Q501J6 OrthoDB:EOG4QRH3N NextBio:323386 Bgee:Q501J6
CleanEx:MM_DDX17 Genevestigator:Q501J6
GermOnline:ENSMUSG00000055065 GO:GO:0072358 Uniprot:Q501J6
Length = 650
Score = 102 (41.0 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 23/70 (32%), Positives = 36/70 (51%)
Query: 30 AARFAYVPQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIIN 89
A A PQ++ + + +PTP+Q + ++GRD++ AQTGS KT + P I
Sbjct: 93 AFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIV 152
Query: 90 GIMREYYSAR 99
I + Y R
Sbjct: 153 HINHQPYLER 162
Score = 82 (33.9 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 101 ELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
++R+L R V+ +AT RL++ LE G+ +L+ YL L EA D+ LDM
Sbjct: 208 QIRDLERGVEICIATPGRLIDFLESGKTNLRRCT-YLVLDEA-DRMLDM 254
>UNIPROTKB|C9JMU5 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 EMBL:Z97056 IPI:IPI01022339
HGNC:HGNC:2740 ChiTaRS:DDX17 ProteinModelPortal:C9JMU5 SMR:C9JMU5
STRING:C9JMU5 PRIDE:C9JMU5 Ensembl:ENST00000381633
ArrayExpress:C9JMU5 Bgee:C9JMU5 Uniprot:C9JMU5
Length = 652
Score = 102 (41.0 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 23/70 (32%), Positives = 36/70 (51%)
Query: 30 AARFAYVPQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIIN 89
A A PQ++ + + +PTP+Q + ++GRD++ AQTGS KT + P I
Sbjct: 93 AFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIV 152
Query: 90 GIMREYYSAR 99
I + Y R
Sbjct: 153 HINHQPYLER 162
Score = 82 (33.9 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 101 ELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
++R+L R V+ +AT RL++ LE G+ +L+ YL L EA D+ LDM
Sbjct: 208 QIRDLERGVEICIATPGRLIDFLESGKTNLRRCT-YLVLDEA-DRMLDM 254
>UNIPROTKB|Q4K4H4 [details] [associations]
symbol:rhlE_2 "Putative ATP-dependent RNA helicase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006139 GO:GO:0003676
EMBL:CP000076 GenomeReviews:CP000076_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:DGDLMGF ProtClustDB:CLSK865855 RefSeq:YP_262859.1
ProteinModelPortal:Q4K4H4 GeneID:3480173 KEGG:pfl:PFL_5801
PATRIC:19881109 BioCyc:PFLU220664:GIX8-5841-MONOMER Uniprot:Q4K4H4
Length = 622
Score = 109 (43.4 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 21/40 (52%), Positives = 27/40 (67%)
Query: 49 YVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPII 88
Y +PTPVQ+ A ++ GRDLM AQTG+ KT F PI+
Sbjct: 21 YTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPIL 60
Score = 67 (28.6 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 101 ELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
+++ +AR VD L+A RL++L +G V L + L L EA D+ LDM
Sbjct: 122 QVQAMARGVDVLVACPGRLLDLAGQGSVDLSHV-EILVLDEA-DRMLDM 168
>UNIPROTKB|Q92841 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0033148 "positive
regulation of intracellular estrogen receptor signaling pathway"
evidence=IDA] [GO:0030331 "estrogen receptor binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:2001014 "regulation of
skeletal muscle cell differentiation" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0003724 "RNA helicase activity"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0008186 "RNA-dependent ATPase activity" evidence=TAS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005730
EMBL:CH471095 GO:GO:0045944 GO:GO:0006351 GO:GO:0003723
GO:GO:0006396 GO:GO:0003713 GO:GO:0033148 GO:GO:0030331
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 GO:GO:0008186 EMBL:U59321 EMBL:CR456432
EMBL:AL713763 EMBL:Z97056 EMBL:BC000595 IPI:IPI00651653
IPI:IPI00651677 IPI:IPI00889541 IPI:IPI01022339 PIR:S72367
RefSeq:NP_006377.2 UniGene:Hs.706116 UniGene:Hs.725500
ProteinModelPortal:Q92841 SMR:Q92841 DIP:DIP-29843N IntAct:Q92841
MINT:MINT-4545892 STRING:Q92841 PhosphoSite:Q92841 DMDM:3122595
REPRODUCTION-2DPAGE:IPI00023785 PaxDb:Q92841 PRIDE:Q92841
DNASU:10521 Ensembl:ENST00000403230 GeneID:10521 KEGG:hsa:10521
UCSC:uc003avx.4 CTD:10521 GeneCards:GC22M038879 HGNC:HGNC:2740
HPA:CAB024908 MIM:608469 neXtProt:NX_Q92841 PharmGKB:PA27206
HOVERGEN:HBG015893 InParanoid:Q92841 KO:K13178 ChiTaRS:DDX17
GenomeRNAi:10521 NextBio:39902 ArrayExpress:Q92841 Bgee:Q92841
CleanEx:HS_DDX17 Genevestigator:Q92841 GermOnline:ENSG00000100201
GO:GO:2001014 Uniprot:Q92841
Length = 729
Score = 102 (41.0 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 23/70 (32%), Positives = 36/70 (51%)
Query: 30 AARFAYVPQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIIN 89
A A PQ++ + + +PTP+Q + ++GRD++ AQTGS KT + P I
Sbjct: 172 AFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIV 231
Query: 90 GIMREYYSAR 99
I + Y R
Sbjct: 232 HINHQPYLER 241
Score = 82 (33.9 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 101 ELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
++R+L R V+ +AT RL++ LE G+ +L+ YL L EA D+ LDM
Sbjct: 287 QIRDLERGVEICIATPGRLIDFLESGKTNLRRCT-YLVLDEA-DRMLDM 333
>UNIPROTKB|H3BLZ8 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA] [GO:0072358
"cardiovascular system development" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0009791
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 EMBL:Z97056 HGNC:HGNC:2740
ChiTaRS:DDX17 GO:GO:0072358 ProteinModelPortal:H3BLZ8 SMR:H3BLZ8
Ensembl:ENST00000396821 Bgee:H3BLZ8 Uniprot:H3BLZ8
Length = 731
Score = 102 (41.0 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 23/70 (32%), Positives = 36/70 (51%)
Query: 30 AARFAYVPQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIIN 89
A A PQ++ + + +PTP+Q + ++GRD++ AQTGS KT + P I
Sbjct: 172 AFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIV 231
Query: 90 GIMREYYSAR 99
I + Y R
Sbjct: 232 HINHQPYLER 241
Score = 82 (33.9 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 101 ELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
++R+L R V+ +AT RL++ LE G+ +L+ YL L EA D+ LDM
Sbjct: 287 QIRDLERGVEICIATPGRLIDFLESGKTNLRRCT-YLVLDEA-DRMLDM 333
>UNIPROTKB|F1PID8 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:QQFPQPP EMBL:AAEX03007314
Ensembl:ENSCAFT00000002162 Uniprot:F1PID8
Length = 736
Score = 102 (41.0 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 23/70 (32%), Positives = 36/70 (51%)
Query: 30 AARFAYVPQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIIN 89
A A PQ++ + + +PTP+Q + ++GRD++ AQTGS KT + P I
Sbjct: 174 AFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIV 233
Query: 90 GIMREYYSAR 99
I + Y R
Sbjct: 234 HINHQPYLER 243
Score = 82 (33.9 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 101 ELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
++R+L R V+ +AT RL++ LE G+ +L+ YL L EA D+ LDM
Sbjct: 289 QIRDLERGVEICIATPGRLIDFLESGKTNLRRCT-YLVLDEA-DRMLDM 335
>UNIPROTKB|F1SKQ0 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0072358 "cardiovascular system development"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 GO:GO:0072358 OMA:QQFPQPP
EMBL:FP102457 Ensembl:ENSSSCT00000000110 Uniprot:F1SKQ0
Length = 736
Score = 102 (41.0 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 23/70 (32%), Positives = 36/70 (51%)
Query: 30 AARFAYVPQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIIN 89
A A PQ++ + + +PTP+Q + ++GRD++ AQTGS KT + P I
Sbjct: 174 AFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIV 233
Query: 90 GIMREYYSAR 99
I + Y R
Sbjct: 234 HINHQPYLER 243
Score = 82 (33.9 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 101 ELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
++R+L R V+ +AT RL++ LE G+ +L+ YL L EA D+ LDM
Sbjct: 289 QIRDLERGVEICIATPGRLIDFLESGKTNLRRCT-YLVLDEA-DRMLDM 335
>GENEDB_PFALCIPARUM|PF08_0096 [details] [associations]
symbol:PF08_0096 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0003724 "RNA helicase
activity" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 KO:K11594
HSSP:P10081 EMBL:AL844507 RefSeq:XP_001349420.1
ProteinModelPortal:Q8IAU1 IntAct:Q8IAU1 MINT:MINT-1660402
EnsemblProtists:PF08_0096:mRNA GeneID:2655295 KEGG:pfa:PF08_0096
EuPathDB:PlasmoDB:PF3D7_0810600 HOGENOM:HOG000280970 OMA:NNPFNNN
ProtClustDB:CLSZ2432713 Uniprot:Q8IAU1
Length = 941
Score = 106 (42.4 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 28/84 (33%), Positives = 45/84 (53%)
Query: 9 SVFASENAAPASSSTNTLSSPAARFAYVPQHLRNKPRTYKYVKPTPVQRHATSILVAGRD 68
S F SEN A + T P+ + + L + + Y K TP+Q+++ +I++ D
Sbjct: 349 SGFNSENVA----AIETFDDPSLN---LNELLLSNIKKVNYDKTTPIQKYSLNIIMNRND 401
Query: 69 LMACAQTGSRKTTPFCFPIINGIM 92
L+ AQTGS KT + PIIN ++
Sbjct: 402 LIGVAQTGSGKTAGYLLPIINHML 425
Score = 77 (32.2 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 23/72 (31%), Positives = 40/72 (55%)
Query: 83 FCFP--IINGIMREYYSARKELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALK 140
FCF I ++ + + +L L + D ++AT RL ++LE+G++ L + +L L
Sbjct: 474 FCFETGIKPVVLYGGNNIKTQLSNLDKGADIIVATPGRLNDILEKGKIKL-FLTTFLVLD 532
Query: 141 EAADQTLDMALN 152
EA D+ LDM +
Sbjct: 533 EA-DRMLDMGFS 543
>UNIPROTKB|Q8IAU1 [details] [associations]
symbol:PF08_0096 "RNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0003724 "RNA helicase activity"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 KO:K11594
HSSP:P10081 EMBL:AL844507 RefSeq:XP_001349420.1
ProteinModelPortal:Q8IAU1 IntAct:Q8IAU1 MINT:MINT-1660402
EnsemblProtists:PF08_0096:mRNA GeneID:2655295 KEGG:pfa:PF08_0096
EuPathDB:PlasmoDB:PF3D7_0810600 HOGENOM:HOG000280970 OMA:NNPFNNN
ProtClustDB:CLSZ2432713 Uniprot:Q8IAU1
Length = 941
Score = 106 (42.4 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 28/84 (33%), Positives = 45/84 (53%)
Query: 9 SVFASENAAPASSSTNTLSSPAARFAYVPQHLRNKPRTYKYVKPTPVQRHATSILVAGRD 68
S F SEN A + T P+ + + L + + Y K TP+Q+++ +I++ D
Sbjct: 349 SGFNSENVA----AIETFDDPSLN---LNELLLSNIKKVNYDKTTPIQKYSLNIIMNRND 401
Query: 69 LMACAQTGSRKTTPFCFPIINGIM 92
L+ AQTGS KT + PIIN ++
Sbjct: 402 LIGVAQTGSGKTAGYLLPIINHML 425
Score = 77 (32.2 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 23/72 (31%), Positives = 40/72 (55%)
Query: 83 FCFP--IINGIMREYYSARKELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALK 140
FCF I ++ + + +L L + D ++AT RL ++LE+G++ L + +L L
Sbjct: 474 FCFETGIKPVVLYGGNNIKTQLSNLDKGADIIVATPGRLNDILEKGKIKL-FLTTFLVLD 532
Query: 141 EAADQTLDMALN 152
EA D+ LDM +
Sbjct: 533 EA-DRMLDMGFS 543
>SGD|S000005056 [details] [associations]
symbol:DBP2 "ATP-dependent RNA helicase of the DEAD-box
protein family" species:4932 "Saccharomyces cerevisiae" [GO:0071042
"nuclear polyadenylation-dependent mRNA catabolic process"
evidence=IGI;IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0008186 "RNA-dependent
ATPase activity" evidence=IMP;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA;IPI] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA;IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000005056 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0000184 EMBL:BK006947 GO:GO:0003723 EMBL:Z69382
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
OrthoDB:EOG47SWP6 EMBL:X52649 EMBL:Z71388 EMBL:M64991 PIR:S13757
RefSeq:NP_014287.3 RefSeq:NP_014296.4 ProteinModelPortal:P24783
SMR:P24783 DIP:DIP-2438N IntAct:P24783 MINT:MINT-636962
STRING:P24783 PaxDb:P24783 PeptideAtlas:P24783 EnsemblFungi:YNL112W
GeneID:855611 GeneID:855620 KEGG:sce:YNL103W KEGG:sce:YNL112W
CYGD:YNL112w GeneTree:ENSGT00660000095174 NextBio:979789
Genevestigator:P24783 GermOnline:YNL112W Uniprot:P24783
Length = 546
Score = 98 (39.6 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 24/78 (30%), Positives = 38/78 (48%)
Query: 11 FASENAAPASSSTNTLSSPAARF--AYVPQHLRNKPRTYKYVKPTPVQRHATSILVAGRD 68
F EN S + + P F A P ++ N+ + + KPT +Q + ++GRD
Sbjct: 95 FRKENEMTISG--HDIPKPITTFDEAGFPDYVLNEVKAEGFDKPTGIQCQGWPMALSGRD 152
Query: 69 LMACAQTGSRKTTPFCFP 86
++ A TGS KT +C P
Sbjct: 153 MVGIAATGSGKTLSYCLP 170
Score = 85 (35.0 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 20/50 (40%), Positives = 36/50 (72%)
Query: 100 KELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
+++R+L+R + ++AT RL+++LE G+ +L+ + YL L EA D+ LDM
Sbjct: 228 QQIRDLSRGSEIVIATPGRLIDMLEIGKTNLKRVT-YLVLDEA-DRMLDM 275
>ZFIN|ZDB-GENE-050706-53 [details] [associations]
symbol:ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
42" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-050706-53 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
EMBL:BX324157 IPI:IPI00774497 Ensembl:ENSDART00000076209
Uniprot:E7F401
Length = 910
Score = 118 (46.6 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 26/66 (39%), Positives = 39/66 (59%)
Query: 29 PAARFAYV--PQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFP 86
PA FA+ + L ++ R +Y +PTP+Q I ++GRD + A+TGS KT F +P
Sbjct: 255 PATSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPIALSGRDAIGIAKTGSGKTAAFIWP 314
Query: 87 IINGIM 92
I+ IM
Sbjct: 315 ILVHIM 320
Score = 44 (20.5 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 13/50 (26%), Positives = 27/50 (54%)
Query: 100 KELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
++ + L + ++ T RL++ +++ SLQ + +L EA D+ DM
Sbjct: 372 EQAKALQEGAEIVVCTPGRLIDHVKKKATSLQRVT-FLVFDEA-DRMFDM 419
>TIGR_CMR|CPS_2658 [details] [associations]
symbol:CPS_2658 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 RefSeq:YP_269372.1
ProteinModelPortal:Q480Z7 GeneID:3520428 KEGG:cps:CPS_2658
PATRIC:21468367 OMA:ERNFDSS BioCyc:CPSY167879:GI48-2720-MONOMER
Uniprot:Q480Z7
Length = 399
Score = 110 (43.8 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 24/58 (41%), Positives = 31/58 (53%)
Query: 49 YVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYYSAR-KELREL 105
Y +PTP+Q+ L+ G DL+ AQTG+ KT F PIIN R + K R L
Sbjct: 22 YKQPTPIQKECIPALINGNDLLGIAQTGTGKTAAFSLPIINKFGRNKIDIKAKSTRSL 79
Score = 56 (24.8 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 109 VDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
+D L+AT RL++L+E G ++ + + L EA D LDM
Sbjct: 126 LDILVATPGRLLDLIETGDINFKAL-EVFVLDEA-DTMLDM 164
>UNIPROTKB|A4QSS5 [details] [associations]
symbol:DBP2 "ATP-dependent RNA helicase DBP2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 EMBL:CM001233 GO:GO:0003723
GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 OrthoDB:EOG47SWP6 RefSeq:XP_003712846.1
ProteinModelPortal:A4QSS5 EnsemblFungi:MGG_16901T0 GeneID:12985738
KEGG:mgr:MGG_16901 Uniprot:A4QSS5
Length = 548
Score = 94 (38.1 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 22/80 (27%), Positives = 40/80 (50%)
Query: 11 FASENAAPASSSTNTLSSPAARF--AYVPQHLRNKPRTYKYVKPTPVQRHATSILVAGRD 68
F E++ S + P F A P+++ ++ + + PT +Q + ++GRD
Sbjct: 107 FRREHSMAVQGSD--VPKPVETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRD 164
Query: 69 LMACAQTGSRKTTPFCFPII 88
++ A+TGS KT +C P I
Sbjct: 165 VVGIAETGSGKTLTYCLPAI 184
Score = 90 (36.7 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 21/49 (42%), Positives = 35/49 (71%)
Query: 101 ELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
++R+L+R V+ +AT RL+++LE G+ +L+ + YL L EA D+ LDM
Sbjct: 241 QIRDLSRGVEVCIATPGRLIDMLESGKTNLRRVT-YLVLDEA-DRMLDM 287
>TIGR_CMR|CPS_1418 [details] [associations]
symbol:CPS_1418 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:YP_268161.1 ProteinModelPortal:Q485V4
GeneID:3523021 KEGG:cps:CPS_1418 PATRIC:21466051
BioCyc:CPSY167879:GI48-1499-MONOMER Uniprot:Q485V4
Length = 401
Score = 128 (50.1 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 30/95 (31%), Positives = 51/95 (53%)
Query: 49 YVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYYSARKELRELARW 108
Y KPT +Q+ A +++AG+D++A AQTG+ KT F P++ + +Y K+LR A+
Sbjct: 21 YTKPTAIQQKAIPVVLAGKDIIAAAQTGTGKTASFVLPLLEQLNSQYKETGKKLR--AKR 78
Query: 109 VDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAA 143
+ L+ R L + S+ +YL + A
Sbjct: 79 IRALILVPTR--ELAVQVEASISQYAKYLDISSMA 111
>CGD|CAL0005460 [details] [associations]
symbol:DBP3 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0000464 "endonucleolytic cleavage in
ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0008186
"RNA-dependent ATPase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0005460
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 EMBL:AACQ01000001
EMBL:AACQ01000002 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 RefSeq:XP_723365.1 RefSeq:XP_723554.1
ProteinModelPortal:Q5APT8 STRING:Q5APT8 GeneID:3634868
GeneID:3635070 KEGG:cal:CaO19.12334 KEGG:cal:CaO19.4870 KO:K14811
Uniprot:Q5APT8
Length = 564
Score = 109 (43.4 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 26/82 (31%), Positives = 41/82 (50%)
Query: 11 FASENAAPASSSTNTLSSPAARFAYVPQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLM 70
F S+N +++ P F V + K+ KPTP+Q + L++G+D++
Sbjct: 135 FLSDNEITVEDPSSSSLRPILSFDQVQLTSAITSKLSKFDKPTPIQSVSWPFLLSGKDVI 194
Query: 71 ACAQTGSRKTTPFCFPIINGIM 92
A+TGS KT F P IN I+
Sbjct: 195 GVAETGSGKTFAFGVPAINNII 216
Score = 59 (25.8 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 18/70 (25%), Positives = 38/70 (54%)
Query: 84 CFPIINGIMREYYSARKELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAA 143
C + G+ ++ ++R++ + + ++AT RLV+L+ G ++L + YL L EA
Sbjct: 254 CVAVYGGVSKD-----DQIRKI-KTANVVVATPGRLVDLINDGAINLGKV-NYLVLDEA- 305
Query: 144 DQTLDMALNQ 153
D+ L+ +
Sbjct: 306 DRMLEKGFEE 315
>POMBASE|SPBP8B7.16c [details] [associations]
symbol:dbp2 "ATP-dependent RNA helicase Dbp2"
species:4896 "Schizosaccharomyces pombe" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPBP8B7.16c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005730 GO:GO:0000184
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY OrthoDB:EOG47SWP6
EMBL:X52648 EMBL:L11574 PIR:T40810 RefSeq:NP_596523.1
ProteinModelPortal:P24782 IntAct:P24782 STRING:P24782 PRIDE:P24782
EnsemblFungi:SPBP8B7.16c.1 GeneID:2541383 KEGG:spo:SPBP8B7.16c
NextBio:20802492 Uniprot:P24782
Length = 550
Score = 99 (39.9 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 20/62 (32%), Positives = 34/62 (54%)
Query: 29 PAARF--AYVPQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFP 86
P F A P ++ + + + PTP+Q+ A + ++GRD++ + TGS KT +C P
Sbjct: 120 PVTTFEEAGFPNYVLKEVKQLGFEAPTPIQQQAWPMAMSGRDMVGISATGSGKTLSYCLP 179
Query: 87 II 88
I
Sbjct: 180 AI 181
Score = 77 (32.2 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 101 ELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
++R+L R V+ +AT RL+++L+ + +L+ + YL L EA D+ LDM
Sbjct: 238 QIRDLIRGVEICIATPGRLLDMLDSNKTNLRRVT-YLVLDEA-DRMLDM 284
>FB|FBgn0036754 [details] [associations]
symbol:CG5589 species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014296
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GeneTree:ENSGT00550000074863 KO:K14779 OMA:NVMKQSG
RefSeq:NP_649009.1 ProteinModelPortal:Q9VVK8 SMR:Q9VVK8
STRING:Q9VVK8 PRIDE:Q9VVK8 EnsemblMetazoa:FBtr0075170 GeneID:39979
KEGG:dme:Dmel_CG5589 UCSC:CG5589-RA FlyBase:FBgn0036754
InParanoid:Q9VVK8 OrthoDB:EOG4QBZMN PhylomeDB:Q9VVK8
GenomeRNAi:39979 NextBio:816380 Bgee:Q9VVK8 Uniprot:Q9VVK8
Length = 594
Score = 129 (50.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 40/114 (35%), Positives = 55/114 (48%)
Query: 14 ENAAPASSSTNTLSSPAARFAYVPQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACA 73
+N P S TL+ + Q+L + R + + PTP+Q A +L+ R LMACA
Sbjct: 108 KNVPPPVDSFGTLTRDFKMLPRLQQNLLS--RNFDH--PTPIQMQALPVLLQRRALMACA 163
Query: 74 QTGSRKTTPFCFPIINGIMREYYSARKEL-----RELARWVDNLMATLRRLVNL 122
TGS KT F PIING+ + + L RELA+ + A L R L
Sbjct: 164 PTGSGKTLAFLTPIINGLRAHKTTGLRALVLAPTRELAQQIYRECAELTRETGL 217
>ASPGD|ASPL0000013201 [details] [associations]
symbol:AN4233 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003723 EMBL:BN001302
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 EMBL:AACD01000068 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
RefSeq:XP_661837.1 ProteinModelPortal:Q5B5E7 SMR:Q5B5E7
STRING:Q5B5E7 EnsemblFungi:CADANIAT00004427 GeneID:2873652
KEGG:ani:AN4233.2 OrthoDB:EOG4ZPJ3P Uniprot:Q5B5E7
Length = 465
Score = 109 (43.4 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 32/116 (27%), Positives = 51/116 (43%)
Query: 7 ADSVFASENAAPASSSTNTLSSPAARFAY--VPQHLRNKPRTYKYVKPTPVQRHATSILV 64
A+SV + +A + ++ +PA F + L Y PTP+Q A + +
Sbjct: 22 AESVSSRGSAKDETQTSGEEPAPAKSFKELGIIDQLCEACENMGYKAPTPIQSQAIPLAL 81
Query: 65 AGRDLMACAQTGSRKTTPFCFPIINGIMRE----YYSARKELRELARWVDNLMATL 116
GRD++ A+TGS KT F P++ +M + RELA + TL
Sbjct: 82 EGRDVIGLAETGSGKTAAFALPMLQALMEAPQTLFGLVLAPTRELAYQISQAFETL 137
Score = 53 (23.7 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 17/39 (43%), Positives = 27/39 (69%)
Query: 112 LMATLRRLVNLLERGR-VSLQMIIRYLALKEAADQTLDM 149
++AT RL++ LE + SL+ + +YLA+ EA D+ LDM
Sbjct: 168 IVATPGRLLDHLENTKGFSLRNL-KYLAIDEA-DRLLDM 204
>ZFIN|ZDB-GENE-030131-18 [details] [associations]
symbol:si:dkey-156n14.5 "si:dkey-156n14.5"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-18 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
KO:K13178 EMBL:CR626864 IPI:IPI00896916 RefSeq:XP_001923830.1
UniGene:Dr.75535 Ensembl:ENSDART00000129202 GeneID:556764
KEGG:dre:556764 NextBio:20881652 ArrayExpress:F1QBS1 Bgee:F1QBS1
Uniprot:F1QBS1
Length = 671
Score = 96 (38.9 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 23/73 (31%), Positives = 36/73 (49%)
Query: 29 PAARF--AYVPQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFP 86
P F A PQ++ + + +PT +Q + ++GRD++ AQTGS KT + P
Sbjct: 93 PVTNFHQAQFPQYVMDVLLQQNFKEPTAIQAQGFPLALSGRDMVGIAQTGSGKTLAYLLP 152
Query: 87 IINGIMREYYSAR 99
I I + Y R
Sbjct: 153 AIVHINHQPYLER 165
Score = 80 (33.2 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 101 ELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
++R+L R V+ +AT RL++ LE G+ +L+ YL L EA D+ LDM
Sbjct: 211 QIRDLERGVEICIATPGRLIDFLEVGKTNLRRCT-YLVLDEA-DRMLDM 257
>CGD|CAL0000056 [details] [associations]
symbol:orf19.7546 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0003723
EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K14777 EMBL:AR550432 RefSeq:XP_719308.1
ProteinModelPortal:Q5ACU6 SMR:Q5ACU6 STRING:Q5ACU6 GeneID:3639008
KEGG:cal:CaO19.7546 Uniprot:Q5ACU6
Length = 539
Score = 109 (43.4 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 29/86 (33%), Positives = 44/86 (51%)
Query: 13 SENAAPASSSTNTLSSPAA-RFA------YVPQHLRNKPRTYKYVKPTPVQRHATSILVA 65
S +++ SSS T+ A +F VP L + + K+ KPTP+Q A +
Sbjct: 101 SSSSSTTSSSITTIDPDAELKFKTFKELNLVPDLLESI-ESMKFTKPTPIQSEAIPHALE 159
Query: 66 GRDLMACAQTGSRKTTPFCFPIINGI 91
G+D++ AQTGS KT F PI+ +
Sbjct: 160 GKDIIGLAQTGSGKTAAFAIPILQSL 185
Score = 54 (24.1 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 101 ELRELARWVDNLMATLRRLVNLLERGR-VSLQMIIRYLALKEAADQTLDM 149
+ R+L R ++AT R+++ LE + SL+ + +YL + EA D+ LDM
Sbjct: 234 QARDLMRKPHVIVATPGRIMDHLEHTKGFSLKNL-KYLVMDEA-DRLLDM 281
>WB|WBGene00001601 [details] [associations]
symbol:glh-4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0007276 "gamete generation"
evidence=IMP] [GO:0043186 "P granule" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0008432 "JUN kinase binding" evidence=IPI]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343
SMART:SM00490 GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0003723 GO:GO:0042127 Gene3D:4.10.60.10 SUPFAM:SSF57756
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0007276
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043186 GeneTree:ENSGT00620000087942
EMBL:AF079508 EMBL:FO081191 PIR:T32759 PIR:T43326
RefSeq:NP_491207.3 ProteinModelPortal:O76743 SMR:O76743
IntAct:O76743 STRING:O76743 PaxDb:O76743 PRIDE:O76743
EnsemblMetazoa:T12F5.3.1 EnsemblMetazoa:T12F5.3.2 GeneID:171941
KEGG:cel:CELE_T12F5.3 UCSC:T12F5.3.1 CTD:171941 WormBase:T12F5.3
InParanoid:O76743 NextBio:873335 Uniprot:O76743
Length = 1156
Score = 129 (50.5 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 31/89 (34%), Positives = 46/89 (51%)
Query: 33 FAYVPQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIM 92
F +PQ L + + K +PTP+QR + ++ G D++ACA TGS KT F P + +M
Sbjct: 740 FKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLM 799
Query: 93 REYYSARKELRELARWVDNLMATLRRLVN 121
E+ R E ++A R LVN
Sbjct: 800 EEFEKDRDVTDEKPSPRLLIVAPTRELVN 828
>ZFIN|ZDB-GENE-030131-925 [details] [associations]
symbol:ddx5 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
5" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-925 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
EMBL:BX085195 IPI:IPI00488168 Ensembl:ENSDART00000055492
ArrayExpress:F1Q5L6 Bgee:F1Q5L6 Uniprot:F1Q5L6
Length = 617
Score = 93 (37.8 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 29 PAARF--AYVPQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFP 86
P +F A P+++ + + PTP+Q + ++G+D++ AQTGS KT + P
Sbjct: 94 PIVKFHEANFPKYVMDVITKQNWTDPTPIQAQGWPVALSGKDMVGIAQTGSGKTLSYLLP 153
Query: 87 II 88
I
Sbjct: 154 AI 155
Score = 82 (33.9 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 101 ELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
++R+L R V+ +AT RL++ LE G+ +L+ YL L EA D+ LDM
Sbjct: 212 QIRDLERGVEICIATPGRLIDFLEAGKTNLRRCT-YLVLDEA-DRMLDM 258
>TAIR|locus:2084178 [details] [associations]
symbol:DRH1 "DEAD box RNA helicase 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001202 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00397
PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194
SMART:SM00456 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000184 GO:GO:0003723
EMBL:AC009325 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
EMBL:AB010259 EMBL:AY062591 EMBL:AF428313 EMBL:AY050375
EMBL:BT000795 EMBL:BT009670 IPI:IPI00544638 IPI:IPI00545196
PIR:T52137 RefSeq:NP_001030619.1 RefSeq:NP_566141.1
RefSeq:NP_850492.1 RefSeq:NP_974206.1 UniGene:At.22096
ProteinModelPortal:Q8H136 SMR:Q8H136 IntAct:Q8H136 STRING:Q8H136
PaxDb:Q8H136 PRIDE:Q8H136 EnsemblPlants:AT3G01540.2
EnsemblPlants:AT3G01540.3 EnsemblPlants:AT3G01540.4 GeneID:821116
KEGG:ath:AT3G01540 GeneFarm:931 TAIR:At3g01540 InParanoid:Q8H136
OMA:DPSTEAY PhylomeDB:Q8H136 ProtClustDB:CLSN2687967
Genevestigator:Q8H136 GermOnline:AT3G01540 Uniprot:Q8H136
Length = 619
Score = 89 (36.4 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 24/49 (48%), Positives = 33/49 (67%)
Query: 101 ELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
+LR+L R D ++AT RL ++LE R+SL+ I YL L EA D+ LDM
Sbjct: 273 QLRDLERGADIVVATPGRLNDILEMRRISLRQI-SYLVLDEA-DRMLDM 319
Score = 86 (35.3 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 37 PQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFP 86
P L + + + PTP+Q + I + GRD++A A+TGS KT + P
Sbjct: 166 PPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIP 215
>TIGR_CMR|GSU_0914 [details] [associations]
symbol:GSU_0914 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE017180
GenomeReviews:AE017180_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 OMA:KHRAKRV RefSeq:NP_951968.1
ProteinModelPortal:Q74EP8 GeneID:2687174 KEGG:gsu:GSU0914
PATRIC:22024603 ProtClustDB:CLSK924451
BioCyc:GSUL243231:GH27-925-MONOMER Uniprot:Q74EP8
Length = 447
Score = 119 (46.9 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 49 YVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYYSARKEL-----R 103
Y PTP+Q A ++AGRD+M AQTG+ KT F PI++ + + + L R
Sbjct: 21 YETPTPIQAQAIPAVMAGRDVMGLAQTGTGKTAAFALPILHRLQQGERGRVRALVIAPTR 80
Query: 104 ELARWVDNLMATLRRLVNL 122
ELA +++ TL R L
Sbjct: 81 ELAEQINDSFVTLGRQTRL 99
>TAIR|locus:2035741 [details] [associations]
symbol:RH20 "RNA helicase 20" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
EMBL:AC073944 EMBL:AY062745 EMBL:AY128786 EMBL:AJ010470
IPI:IPI00528901 PIR:B96593 PIR:T51345 RefSeq:NP_175911.1
UniGene:At.20425 ProteinModelPortal:Q9C718 SMR:Q9C718 PaxDb:Q9C718
PRIDE:Q9C718 ProMEX:Q9C718 EnsemblPlants:AT1G55150.1 GeneID:841958
KEGG:ath:AT1G55150 GeneFarm:937 TAIR:At1g55150 InParanoid:Q9C718
OMA:CANHNIL PhylomeDB:Q9C718 ProtClustDB:CLSN2682455
Genevestigator:Q9C718 GermOnline:AT1G55150 Uniprot:Q9C718
Length = 501
Score = 92 (37.4 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 20/65 (30%), Positives = 33/65 (50%)
Query: 26 LSSPAARFAYV--PQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPF 83
+ P F V P ++ + + + +PTP+Q + + GRDL+ A+TGS KT +
Sbjct: 94 IPKPVKSFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSY 153
Query: 84 CFPII 88
P I
Sbjct: 154 LLPAI 158
Score = 77 (32.2 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 18/52 (34%), Positives = 34/52 (65%)
Query: 101 ELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDMALN 152
++R+L + V+ ++AT RL++++E +L+ + YL L EA D+ LDM +
Sbjct: 215 QVRDLQKGVEIVIATPGRLIDMMESNNTNLRRVT-YLVLDEA-DRMLDMGFD 264
>DICTYBASE|DDB_G0293168 [details] [associations]
symbol:ddx17 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=ISS] [GO:0006396 "RNA processing" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0003723 "RNA binding" evidence=IEA;ISS]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0293168 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0000184 GO:GO:0003723 GO:GO:0006396
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 EMBL:AAFI02000199 KO:K12823 GO:GO:0008186
RefSeq:XP_629279.1 HSSP:P09052 ProteinModelPortal:Q54CE0
PRIDE:Q54CE0 EnsemblProtists:DDB0233431 GeneID:8629001
KEGG:ddi:DDB_G0293168 Uniprot:Q54CE0
Length = 785
Score = 90 (36.7 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 49 YVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPII 88
+ PTP+Q A I + GRD++ A+TGS KT F P I
Sbjct: 404 FPNPTPIQSQAWPIALKGRDIIGLAKTGSGKTLAFLLPSI 443
Score = 79 (32.9 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 20/53 (37%), Positives = 34/53 (64%)
Query: 97 SARKELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
S ++ L + V+ ++AT RL+++LE G+ +L+ + YL L EA D+ LDM
Sbjct: 496 SKHTQVAALKKGVEIVIATPGRLIDILESGKTNLRRVT-YLVLDEA-DRMLDM 546
Score = 37 (18.1 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 12 ASENAAPASSSTNTLSSPAARF 33
+S N P+SSS+++ SS + +
Sbjct: 71 SSYNKYPSSSSSSSSSSSTSSY 92
Score = 36 (17.7 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 6/16 (37%), Positives = 11/16 (68%)
Query: 20 SSSTNTLSSPAARFAY 35
SS++N S P + ++Y
Sbjct: 170 SSNSNGYSKPTSNYSY 185
Score = 34 (17.0 bits), Expect = 3.6e-06, Sum P(3) = 3.6e-06
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 4 SWAADSVFASENAAPASSSTNTLSSPAARF 33
S+ SV + PASSS N S P + +
Sbjct: 257 SYDPSSVSSYGAVTPASSSYNA-SVPGSSY 285
>TAIR|locus:2032910 [details] [associations]
symbol:RH36 "RNA helicase 36" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0006364 "rRNA processing" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0009791 "post-embryonic development"
evidence=IMP] [GO:0090406 "pollen tube" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0009561 "megagametogenesis"
evidence=IMP] [GO:0006606 "protein import into nucleus"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005634 GO:GO:0003676
GO:GO:0009791 GO:GO:0009561 EMBL:AC006341 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14778
HOGENOM:HOG000268802 OMA:EVRTVEQ GO:GO:0090406 IPI:IPI00521131
PIR:G86297 RefSeq:NP_173078.1 UniGene:At.51634
ProteinModelPortal:Q9SA27 SMR:Q9SA27 PaxDb:Q9SA27 PRIDE:Q9SA27
EnsemblPlants:AT1G16280.1 GeneID:838197 KEGG:ath:AT1G16280
KEGG:dosa:Os07t0633500-00 GeneFarm:1012 TAIR:At1g16280
InParanoid:Q9SA27 PhylomeDB:Q9SA27 ProtClustDB:CLSN2679781
Genevestigator:Q9SA27 GermOnline:AT1G16280 Uniprot:Q9SA27
Length = 491
Score = 118 (46.6 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 51 KPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYY 96
KPTPVQ H ++AGRD++ AQTGS KT F PI++ + + Y
Sbjct: 80 KPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAFALPILHRLAEDPY 125
>SGD|S000001107 [details] [associations]
symbol:RRP3 "Protein involved in rRNA processing"
species:4932 "Saccharomyces cerevisiae" [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000462 "maturation of
SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IC] [GO:0006364 "rRNA processing"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000001107 GO:GO:0005524
GO:GO:0005730 EMBL:BK006934 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:U00061 HOGENOM:HOG000268802
GO:GO:0000462 GeneTree:ENSGT00670000098028 KO:K14777 OMA:IFIPSKF
OrthoDB:EOG4ZPJ3P EMBL:AY389302 EMBL:AY389303 PIR:S46713
RefSeq:NP_011932.2 ProteinModelPortal:P38712 SMR:P38712
DIP:DIP-6533N IntAct:P38712 MINT:MINT-518716 STRING:P38712
PaxDb:P38712 PeptideAtlas:P38712 EnsemblFungi:YHR065C GeneID:856462
KEGG:sce:YHR065C CYGD:YHR065c NextBio:982111 Genevestigator:P38712
GermOnline:YHR065C Uniprot:P38712
Length = 501
Score = 118 (46.6 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 31/91 (34%), Positives = 46/91 (50%)
Query: 36 VPQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMRE- 94
VP+ L + Y KPTP+Q A + G D++ AQTGS KT F PI+N + +
Sbjct: 89 VPE-LIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNRLWHDQ 147
Query: 95 --YYSA-RKELRELARWVDNLMATLRRLVNL 122
YY+ RELA+ + +L L+ +
Sbjct: 148 EPYYACILAPTRELAQQIKETFDSLGSLMGV 178
>UNIPROTKB|Q9KS53 [details] [associations]
symbol:VC1407 "ATP-dependent RNA helicase RhlE"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
ProtClustDB:CLSK874358 Uniprot:Q9KS53
Length = 397
Score = 116 (45.9 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 49 YVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYYSARKELREL 105
Y KPT +Q A +++ GRDL+A AQTG+ KT F PI+ + + +K +R L
Sbjct: 21 YQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILEKLRQGQTQRKKRVRAL 77
>TIGR_CMR|VC_1407 [details] [associations]
symbol:VC_1407 "ATP-dependent RNA helicase RhlE"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
ProtClustDB:CLSK874358 Uniprot:Q9KS53
Length = 397
Score = 116 (45.9 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 49 YVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYYSARKELREL 105
Y KPT +Q A +++ GRDL+A AQTG+ KT F PI+ + + +K +R L
Sbjct: 21 YQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILEKLRQGQTQRKKRVRAL 77
>UNIPROTKB|F1NAH6 [details] [associations]
symbol:LOC100859810 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0035458 "cellular response to interferon-beta" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051607 "defense response
to virus" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0035458
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KDQEERS EMBL:AADN02028748
EMBL:AADN02028749 EMBL:AADN02068652 IPI:IPI00576331
Ensembl:ENSGALT00000004794 Uniprot:F1NAH6
Length = 607
Score = 85 (35.0 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 51 KPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPII 88
+PTP+Q +++GRD++ A TGS KT F P+I
Sbjct: 199 QPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVI 236
Score = 85 (35.0 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 22/53 (41%), Positives = 35/53 (66%)
Query: 97 SARKELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
S ++++ + V ++AT RL++LL++ VSL I RYLAL EA D+ +DM
Sbjct: 298 SVKEQMETIKHGVHMMVATPGRLMDLLQKKMVSLD-ICRYLALDEA-DRMIDM 348
>UNIPROTKB|A3KN07 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0035458 "cellular response to
interferon-beta" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOVERGEN:HBG015893
KO:K13116 OMA:KDQEERS CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:DAAA02020056 EMBL:BC133465 IPI:IPI00840518
RefSeq:NP_001076071.1 UniGene:Bt.5258 SMR:A3KN07
Ensembl:ENSBTAT00000043510 GeneID:505276 KEGG:bta:505276
InParanoid:A3KN07 NextBio:20867058 Uniprot:A3KN07
Length = 622
Score = 85 (35.0 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 22/53 (41%), Positives = 35/53 (66%)
Query: 97 SARKELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
S ++++ + V ++AT RL++LL++ VSL I RYLAL EA D+ +DM
Sbjct: 302 SVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLD-ICRYLALDEA-DRMIDM 352
Score = 84 (34.6 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 52 PTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPII 88
PTP+Q +++GRD++ A TGS KT F P+I
Sbjct: 204 PTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVI 240
>UNIPROTKB|E2R052 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0051607 "defense response to virus" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0035458 "cellular
response to interferon-beta" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K13116 CTD:51428 EMBL:AAEX03002959
RefSeq:XP_536417.2 ProteinModelPortal:E2R052
Ensembl:ENSCAFT00000025858 GeneID:479274 KEGG:cfa:479274
NextBio:20854482 Uniprot:E2R052
Length = 622
Score = 85 (35.0 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 22/53 (41%), Positives = 35/53 (66%)
Query: 97 SARKELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
S ++++ + V ++AT RL++LL++ VSL I RYLAL EA D+ +DM
Sbjct: 302 SVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLD-ICRYLALDEA-DRMIDM 352
Score = 84 (34.6 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 52 PTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPII 88
PTP+Q +++GRD++ A TGS KT F P+I
Sbjct: 204 PTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVI 240
>UNIPROTKB|Q9UJV9 [details] [associations]
symbol:DDX41 "Probable ATP-dependent RNA helicase DDX41"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0035458
"cellular response to interferon-beta" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0007275 "multicellular organismal development"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005783
GO:GO:0007275 GO:GO:0005524 GO:GO:0006915 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0003723 GO:GO:0035458 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CH471195
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 KO:K13116 EMBL:AF195417 EMBL:AK001255
EMBL:AK027768 EMBL:AK315491 EMBL:BC015476 EMBL:AL137455
EMBL:BX641072 IPI:IPI00007208 PIR:T46269 RefSeq:NP_057306.2
UniGene:Hs.484288 PDB:2P6N PDBsum:2P6N ProteinModelPortal:Q9UJV9
SMR:Q9UJV9 IntAct:Q9UJV9 MINT:MINT-3081244 STRING:Q9UJV9
PhosphoSite:Q9UJV9 DMDM:20532370 PaxDb:Q9UJV9 PeptideAtlas:Q9UJV9
PRIDE:Q9UJV9 DNASU:51428 Ensembl:ENST00000507955 GeneID:51428
KEGG:hsa:51428 UCSC:uc003mhn.3 CTD:51428 GeneCards:GC05M176938
HGNC:HGNC:18674 HPA:HPA017911 MIM:608170 neXtProt:NX_Q9UJV9
PharmGKB:PA134908862 HOGENOM:HOG000268792 InParanoid:Q9UJV9
OrthoDB:EOG4CVG6K PhylomeDB:Q9UJV9 ChiTaRS:DDX41
EvolutionaryTrace:Q9UJV9 GenomeRNAi:51428 NextBio:54987
ArrayExpress:Q9UJV9 Bgee:Q9UJV9 CleanEx:HS_DDX41
Genevestigator:Q9UJV9 GermOnline:ENSG00000183258 Uniprot:Q9UJV9
Length = 622
Score = 85 (35.0 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 22/53 (41%), Positives = 35/53 (66%)
Query: 97 SARKELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
S ++++ + V ++AT RL++LL++ VSL I RYLAL EA D+ +DM
Sbjct: 302 SVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLD-ICRYLALDEA-DRMIDM 352
Score = 84 (34.6 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 52 PTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPII 88
PTP+Q +++GRD++ A TGS KT F P+I
Sbjct: 204 PTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVI 240
>MGI|MGI:1920185 [details] [associations]
symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 41"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0035458 "cellular response to
interferon-beta" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051607 "defense
response to virus" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=ISO] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
MGI:MGI:1920185 GO:GO:0005783 GO:GO:0005524 GO:GO:0005634
GO:GO:0008380 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006397 GO:GO:0045944 GO:GO:0051607 GO:GO:0003723
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOVERGEN:HBG015893
KO:K13116 OMA:KDQEERS CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:AK156957 EMBL:BC011308 IPI:IPI00127071
RefSeq:NP_598820.2 UniGene:Mm.205045 ProteinModelPortal:Q91VN6
SMR:Q91VN6 IntAct:Q91VN6 STRING:Q91VN6 PhosphoSite:Q91VN6
PaxDb:Q91VN6 PRIDE:Q91VN6 Ensembl:ENSMUST00000021956 GeneID:72935
KEGG:mmu:72935 InParanoid:Q3U0E0 NextBio:337171 Bgee:Q91VN6
CleanEx:MM_DDX41 Genevestigator:Q91VN6
GermOnline:ENSMUSG00000021494 Uniprot:Q91VN6
Length = 622
Score = 85 (35.0 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 22/53 (41%), Positives = 35/53 (66%)
Query: 97 SARKELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
S ++++ + V ++AT RL++LL++ VSL I RYLAL EA D+ +DM
Sbjct: 302 SVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLD-ICRYLALDEA-DRMIDM 352
Score = 84 (34.6 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 52 PTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPII 88
PTP+Q +++GRD++ A TGS KT F P+I
Sbjct: 204 PTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVI 240
>RGD|1311758 [details] [associations]
symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 41"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005783 "endoplasmic
reticulum" evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0035458 "cellular response to interferon-beta"
evidence=IEA;ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0051607
"defense response to virus" evidence=IEA;ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 RGD:1311758 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:CH474032 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOVERGEN:HBG015893 KO:K13116 CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:BC166825 IPI:IPI00565869
RefSeq:NP_001101516.1 UniGene:Rn.114971 SMR:B2RYL8
Ensembl:ENSRNOT00000018114 GeneID:314336 KEGG:rno:314336
UCSC:RGD:1311758 NextBio:667511 Genevestigator:B2RYL8
Uniprot:B2RYL8
Length = 622
Score = 85 (35.0 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 22/53 (41%), Positives = 35/53 (66%)
Query: 97 SARKELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
S ++++ + V ++AT RL++LL++ VSL I RYLAL EA D+ +DM
Sbjct: 302 SVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLD-ICRYLALDEA-DRMIDM 352
Score = 84 (34.6 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 52 PTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPII 88
PTP+Q +++GRD++ A TGS KT F P+I
Sbjct: 204 PTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVI 240
>UNIPROTKB|J3KNN5 [details] [associations]
symbol:DDX41 "Probable ATP-dependent RNA helicase DDX41"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:KDQEERS HGNC:HGNC:18674 ChiTaRS:DDX41 EMBL:AC145098
Ensembl:ENST00000330503 Uniprot:J3KNN5
Length = 640
Score = 85 (35.0 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 22/53 (41%), Positives = 35/53 (66%)
Query: 97 SARKELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
S ++++ + V ++AT RL++LL++ VSL I RYLAL EA D+ +DM
Sbjct: 320 SVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLD-ICRYLALDEA-DRMIDM 370
Score = 84 (34.6 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 52 PTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPII 88
PTP+Q +++GRD++ A TGS KT F P+I
Sbjct: 222 PTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVI 258
>WB|WBGene00017162 [details] [associations]
symbol:ddx-23 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0048589 "developmental growth" evidence=IMP] [GO:0007281 "germ
cell development" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0040021 "hermaphrodite germ-line sex determination"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0002009 GO:GO:0002119 GO:GO:0040011
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0048589 EMBL:FO080705 GO:GO:0010172 GO:GO:0040020
GeneTree:ENSGT00690000102171 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 HSSP:Q58083 HOGENOM:HOG000268796
OMA:PIRNWKE GO:GO:0040021 RefSeq:NP_498260.2
ProteinModelPortal:Q95QN2 SMR:Q95QN2 STRING:Q95QN2 PaxDb:Q95QN2
EnsemblMetazoa:F01F1.7 GeneID:175818 KEGG:cel:CELE_F01F1.7
CTD:175818 WormBase:F01F1.7 InParanoid:Q95QN2 NextBio:889790
Uniprot:Q95QN2
Length = 730
Score = 117 (46.2 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 29/88 (32%), Positives = 45/88 (51%)
Query: 37 PQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYY 96
P + + Y++PTP+QR A I + RD++ A+TGS KT F P++ I
Sbjct: 309 PDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPLLVWITSLPK 368
Query: 97 SARKELRELARWVDNLMATLRRLVNLLE 124
R+E R+L + +MA R L +E
Sbjct: 369 MERQEHRDLGPYAI-IMAPTRELAQQIE 395
>UNIPROTKB|J9NZF6 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KDQEERS EMBL:AAEX03002959
Ensembl:ENSCAFT00000042923 Uniprot:J9NZF6
Length = 649
Score = 85 (35.0 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 22/53 (41%), Positives = 35/53 (66%)
Query: 97 SARKELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
S ++++ + V ++AT RL++LL++ VSL I RYLAL EA D+ +DM
Sbjct: 329 SVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLD-ICRYLALDEA-DRMIDM 379
Score = 84 (34.6 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 52 PTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPII 88
PTP+Q +++GRD++ A TGS KT F P+I
Sbjct: 231 PTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVI 267
>UNIPROTKB|C9J8G5 [details] [associations]
symbol:DDX3Y "ATP-dependent RNA helicase DDX3Y"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
GO:GO:0005737 InterPro:IPR014014 PROSITE:PS51195 HGNC:HGNC:2699
EMBL:AC004474 HOGENOM:HOG000203858 IPI:IPI00647597
ProteinModelPortal:C9J8G5 SMR:C9J8G5 STRING:C9J8G5 PRIDE:C9J8G5
Ensembl:ENST00000454054 ArrayExpress:C9J8G5 Bgee:C9J8G5
Uniprot:C9J8G5
Length = 224
Score = 100 (40.3 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 18/28 (64%), Positives = 22/28 (78%)
Query: 48 KYVKPTPVQRHATSILVAGRDLMACAQT 75
+Y +PTPVQ+HA I+ RDLMACAQT
Sbjct: 197 RYTRPTPVQKHAIPIIKGKRDLMACAQT 224
Score = 48 (22.0 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 27 SSPAARFAYVPQHLRNK 43
+S A++ Y+P HLRN+
Sbjct: 30 ASTASKGRYIPPHLRNR 46
>UNIPROTKB|E2R4Z9 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 EMBL:AAEX03005031
Ensembl:ENSCAFT00000017691 Uniprot:E2R4Z9
Length = 569
Score = 115 (45.5 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 34/102 (33%), Positives = 52/102 (50%)
Query: 37 PQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYY 96
P+ L + +T Y PTP+Q + + GRD++A A TGS KT F P+I + E
Sbjct: 212 PEALNHNLKTSGYEVPTPIQMQMIPVGLLGRDVLASADTGSGKTAAFLLPVITRALCESK 271
Query: 97 SARKEL----RELARWVDN----LMATLRRLVNLLERGRVSL 130
+ + RELA ++N LM+ L R+ +L G + L
Sbjct: 272 TPSALILTPTRELAIQIENQAKELMSGLPRMKTVLLVGGLPL 313
>UNIPROTKB|E2R4Y9 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:VTRPIID EMBL:AAEX03005031
Ensembl:ENSCAFT00000017696 Uniprot:E2R4Y9
Length = 623
Score = 115 (45.5 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 34/102 (33%), Positives = 52/102 (50%)
Query: 37 PQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYY 96
P+ L + +T Y PTP+Q + + GRD++A A TGS KT F P+I + E
Sbjct: 212 PEALNHNLKTSGYEVPTPIQMQMIPVGLLGRDVLASADTGSGKTAAFLLPVITRALCESK 271
Query: 97 SARKEL----RELARWVDN----LMATLRRLVNLLERGRVSL 130
+ + RELA ++N LM+ L R+ +L G + L
Sbjct: 272 TPSALILTPTRELAIQIENQAKELMSGLPRMKTVLLVGGLPL 313
>SGD|S000003046 [details] [associations]
symbol:DBP3 "RNA-Dependent ATPase, member of DExD/H-box
family" species:4932 "Saccharomyces cerevisiae" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IDA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0030687 "preribosome, large
subunit precursor" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000464
"endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000003046 GO:GO:0005524
GO:GO:0005730 EMBL:BK006941 GO:GO:0003723 GO:GO:0030687
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K14811 OrthoDB:EOG42JS0S EMBL:M80437
EMBL:Z72600 PIR:S30805 RefSeq:NP_011437.3 RefSeq:NP_011442.3
ProteinModelPortal:P20447 SMR:P20447 DIP:DIP-2668N IntAct:P20447
MINT:MINT-1164200 STRING:P20447 PaxDb:P20447 PeptideAtlas:P20447
EnsemblFungi:YGL078C GeneID:852802 GeneID:852806 KEGG:sce:YGL073W
KEGG:sce:YGL078C CYGD:YGL078c GeneTree:ENSGT00680000100003
KO:K09419 OMA:EEEWPEK NextBio:972321 Genevestigator:P20447
GermOnline:YGL078C GO:GO:0000464 Uniprot:P20447
Length = 523
Score = 114 (45.2 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 35/113 (30%), Positives = 53/113 (46%)
Query: 8 DSVFASENAAPASSSTNTLSSPAARFAYVPQHLRNKPRTYKYVKPTPVQRHATSILVAGR 67
D F EN S + P F Y+ + K+ KPTP+Q A L++G+
Sbjct: 92 DEYF-KENEIAVEDSLDLALRPLLSFDYLSLDSSIQAEISKFPKPTPIQAVAWPYLLSGK 150
Query: 68 DLMACAQTGSRKTTPFCFPIINGIMREYYSARKEL------RELARWV-DNLM 113
D++ A+TGS KT F P I+ +M + ++ RELA + DNL+
Sbjct: 151 DVVGVAETGSGKTFAFGVPAISHLMNDQKKRGIQVLVISPTRELASQIYDNLI 203
>UNIPROTKB|Q5F485 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008104 "protein
localization" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
EMBL:AJ851415 IPI:IPI00576529 RefSeq:NP_001026097.1
UniGene:Gga.5156 ProteinModelPortal:Q5F485 STRING:Q5F485
GeneID:419959 KEGG:gga:419959 CTD:11325 HOGENOM:HOG000268793
HOVERGEN:HBG081425 InParanoid:Q5F485 KO:K12835 OrthoDB:EOG47WNN9
NextBio:20822943 Uniprot:Q5F485
Length = 944
Score = 117 (46.2 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 25/65 (38%), Positives = 40/65 (61%)
Query: 28 SPAARFAYVPQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPI 87
S ARF + Q L ++ R +Y +PTP+Q + ++GRD++ A+TGS KT F +P+
Sbjct: 253 SSFARFGFDEQ-LMHQIRKSEYTQPTPIQCQGVPVAMSGRDMIGIAKTGSGKTAAFIWPM 311
Query: 88 INGIM 92
+ IM
Sbjct: 312 LIHIM 316
>ZFIN|ZDB-GENE-030131-1927 [details] [associations]
symbol:ddx41 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 41" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490
ZFIN:ZDB-GENE-030131-1927 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
EMBL:CABZ01072950 EMBL:CABZ01072951 EMBL:CABZ01072952
IPI:IPI00961669 Ensembl:ENSDART00000061987 Bgee:F1QQ09
Uniprot:F1QQ09
Length = 473
Score = 89 (36.4 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 20/52 (38%), Positives = 28/52 (53%)
Query: 37 PQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPII 88
PQ + + V PTP+Q +++GRD++ A TGS KT F PII
Sbjct: 45 PQAILKGLKKKGIVHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPII 96
Score = 74 (31.1 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 113 MATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDMALNQ 153
+AT RL++LL + VSL I RYLAL EA D+ +DM +
Sbjct: 169 LATPGRLMDLLNKKMVSLD-ICRYLALDEA-DRMIDMGFEE 207
>UNIPROTKB|D6RJA6 [details] [associations]
symbol:DDX46 "Probable ATP-dependent RNA helicase DDX46"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR011545 Pfam:PF00270 GO:GO:0005524 GO:GO:0005730
EMBL:CH471062 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
UniGene:Hs.406549 HGNC:HGNC:18681 ChiTaRS:DDX46 EMBL:AC006077
EMBL:AC010301 IPI:IPI00967303 SMR:D6RJA6 Ensembl:ENST00000507392
Uniprot:D6RJA6
Length = 471
Score = 113 (44.8 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 22/57 (38%), Positives = 33/57 (57%)
Query: 36 VPQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIM 92
+ + N + + Y KPTP+Q A +++GRDL+ A+TGS KT F P+ IM
Sbjct: 331 ISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIM 387
>RGD|1559513 [details] [associations]
symbol:RGD1559513 "similar to DEAD (Asp-Glu-Ala-Asp) box
polypeptide 41" species:10116 "Rattus norvegicus" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00343
SMART:SM00490 RGD:1559513 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OrthoDB:EOG4CVG6K OMA:MEETETI
IPI:IPI00958592 Ensembl:ENSRNOT00000033492 UCSC:RGD:1559513
NextBio:667517 Uniprot:D4ADJ9
Length = 621
Score = 84 (34.6 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 52 PTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPII 88
PTP+Q +++GRD++ A TGS KT F P+I
Sbjct: 203 PTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVI 239
Score = 83 (34.3 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 22/53 (41%), Positives = 35/53 (66%)
Query: 97 SARKELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
S ++++ + V ++AT RL++LL++ VSL I RYLAL EA D+ +DM
Sbjct: 301 SLKEQMETMRHGVHIMVATPGRLMDLLQKKMVSLD-ICRYLALDEA-DRMIDM 351
>TIGR_CMR|SO_4034 [details] [associations]
symbol:SO_4034 "ATP-dependent RNA helicase DeaD"
species:211586 "Shewanella oneidensis MR-1" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0009631 "cold
acclimation" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:LPQGMPK RefSeq:NP_719564.1
ProteinModelPortal:Q8EA75 GeneID:1171660 KEGG:son:SO_4034
PATRIC:23527732 ProtClustDB:CLSK907463 Uniprot:Q8EA75
Length = 623
Score = 105 (42.0 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 49 YVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGI 91
Y KPTP+Q + L+AG+D++ AQTG+ KT F P++N +
Sbjct: 26 YEKPTPIQSASIDPLMAGKDILGQAQTGTGKTGAFALPLLNKV 68
Score = 51 (23.0 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 16/53 (30%), Positives = 30/53 (56%)
Query: 97 SARKELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
S +++L L R ++ T R+++ + RG + L+ + + L L EA D+ L M
Sbjct: 113 SMQQQLNALKRGPQVIVGTPGRVMDHMRRGTLKLETL-QALVLDEA-DEMLKM 163
>UNIPROTKB|F1P0H1 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00610000086076 EMBL:AADN02056764
IPI:IPI00819332 Ensembl:ENSGALT00000040437 ArrayExpress:F1P0H1
Uniprot:F1P0H1
Length = 703
Score = 114 (45.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 23/66 (34%), Positives = 40/66 (60%)
Query: 29 PAARFAYV--PQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFP 86
P + FA+ + L ++ R +Y +PTP+Q + ++GRD++ A+TGS KT F +P
Sbjct: 246 PGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVAMSGRDMIGIAKTGSGKTAAFIWP 305
Query: 87 IINGIM 92
++ IM
Sbjct: 306 MLIHIM 311
>TAIR|locus:2222617 [details] [associations]
symbol:AT5G14610 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009664
"plant-type cell wall organization" evidence=RCA] [GO:0042545 "cell
wall modification" evidence=RCA] InterPro:IPR000629
InterPro:IPR001202 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00397 PROSITE:PS00039
PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194 SMART:SM00456
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GO:GO:0003676
Gene3D:2.20.70.10 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
KO:K12823 IPI:IPI00992350 RefSeq:NP_196965.2 UniGene:At.43560
ProteinModelPortal:F4K6V1 SMR:F4K6V1 PRIDE:F4K6V1
EnsemblPlants:AT5G14610.1 GeneID:831313 KEGG:ath:AT5G14610
OMA:YLIPGFM Uniprot:F4K6V1
Length = 712
Score = 89 (36.4 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 101 ELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
+L+E+ R VD ++AT RL ++LE R+SL + YL L EA D+ LDM
Sbjct: 344 QLKEIERGVDIVVATPGRLNDILEMKRISLHQV-SYLVLDEA-DRMLDM 390
Score = 76 (31.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 52 PTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYYSAR 99
P+P+Q + I + RD++A A+TGS KT + P + R + +R
Sbjct: 252 PSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFMHLQRIHNDSR 299
>MGI|MGI:1919297 [details] [associations]
symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 42"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008104 "protein localization" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1919297
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008104
GO:GO:0016607 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:AL604045 HSSP:P09052
CTD:11325 HOGENOM:HOG000268793 HOVERGEN:HBG081425 KO:K12835
OrthoDB:EOG47WNN9 OMA:QGVNNTA ChiTaRS:DDX42 EMBL:AK007805
EMBL:AK049311 EMBL:AK169816 EMBL:AK171730 EMBL:BC043036
IPI:IPI00329839 IPI:IPI00830514 RefSeq:NP_082350.3 UniGene:Mm.41367
ProteinModelPortal:Q810A7 SMR:Q810A7 IntAct:Q810A7 STRING:Q810A7
PhosphoSite:Q810A7 PaxDb:Q810A7 PRIDE:Q810A7
Ensembl:ENSMUST00000021046 GeneID:72047 KEGG:mmu:72047
UCSC:uc007lyk.2 UCSC:uc007lyl.2 GeneTree:ENSGT00610000086076
InParanoid:Q810A7 NextBio:335308 Bgee:Q810A7 CleanEx:MM_DDX42
Genevestigator:Q810A7 Uniprot:Q810A7
Length = 929
Score = 114 (45.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 23/66 (34%), Positives = 40/66 (60%)
Query: 29 PAARFAYV--PQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFP 86
P + FA+ + L ++ R +Y +PTP+Q + ++GRD++ A+TGS KT F +P
Sbjct: 251 PGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWP 310
Query: 87 IINGIM 92
++ IM
Sbjct: 311 MLIHIM 316
>RGD|1304909 [details] [associations]
symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 42"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008104 "protein localization" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:1304909
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008104
GO:GO:0003676 EMBL:CH473948 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
CTD:11325 KO:K12835 OrthoDB:EOG47WNN9 GeneTree:ENSGT00610000086076
IPI:IPI00361283 RefSeq:NP_001100529.1 UniGene:Rn.154550
Ensembl:ENSRNOT00000013046 GeneID:303607 KEGG:rno:303607
UCSC:RGD:1304909 NextBio:651732 Uniprot:D4A031
Length = 929
Score = 114 (45.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 23/66 (34%), Positives = 40/66 (60%)
Query: 29 PAARFAYV--PQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFP 86
P + FA+ + L ++ R +Y +PTP+Q + ++GRD++ A+TGS KT F +P
Sbjct: 251 PGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWP 310
Query: 87 IINGIM 92
++ IM
Sbjct: 311 MLIHIM 316
>WB|WBGene00001598 [details] [associations]
symbol:glh-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0016070 "RNA metabolic process"
evidence=ISS] [GO:0043186 "P granule" evidence=IDA] [GO:0003724
"RNA helicase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008432 "JUN kinase binding" evidence=IPI]
[GO:0043621 "protein self-association" evidence=IPI] [GO:0017151
"DEAD/H-box RNA helicase binding" evidence=IPI] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00098 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
GO:GO:0005524 GO:GO:0006915 GO:GO:0046872 GO:GO:0008270
GO:GO:0003723 GO:GO:0009791 GO:GO:0007281 Gene3D:4.10.60.10
SUPFAM:SSF57756 GO:GO:0016070 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
GeneTree:ENSGT00620000087942 EMBL:L19948 EMBL:U62772 EMBL:FO080897
PIR:A48686 PIR:C87818 PIR:T15132 RefSeq:NP_491963.1
ProteinModelPortal:P34689 SMR:P34689 IntAct:P34689 STRING:P34689
PaxDb:P34689 EnsemblMetazoa:T21G5.3 GeneID:172414
KEGG:cel:CELE_T21G5.3 UCSC:T21G5.3 CTD:172414 WormBase:T21G5.3
InParanoid:P34689 OMA:HRSNECT NextBio:875417 Uniprot:P34689
Length = 763
Score = 113 (44.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 27/76 (35%), Positives = 42/76 (55%)
Query: 20 SSSTNTLS-SPAARFAY--VPQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTG 76
+SS T+ P FA + + ++ Y K TP+Q++A ++ G D+MACAQTG
Sbjct: 329 TSSEKTVGIKPCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTG 388
Query: 77 SRKTTPFCFPIINGIM 92
S KT F PI+ ++
Sbjct: 389 SGKTAAFLLPIMTRLI 404
>UNIPROTKB|P34689 [details] [associations]
symbol:glh-1 "ATP-dependent RNA helicase glh-1"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0009791
GO:GO:0007281 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043186 GeneTree:ENSGT00620000087942 EMBL:L19948 EMBL:U62772
EMBL:FO080897 PIR:A48686 PIR:C87818 PIR:T15132 RefSeq:NP_491963.1
ProteinModelPortal:P34689 SMR:P34689 IntAct:P34689 STRING:P34689
PaxDb:P34689 EnsemblMetazoa:T21G5.3 GeneID:172414
KEGG:cel:CELE_T21G5.3 UCSC:T21G5.3 CTD:172414 WormBase:T21G5.3
InParanoid:P34689 OMA:HRSNECT NextBio:875417 Uniprot:P34689
Length = 763
Score = 113 (44.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 27/76 (35%), Positives = 42/76 (55%)
Query: 20 SSSTNTLS-SPAARFAY--VPQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTG 76
+SS T+ P FA + + ++ Y K TP+Q++A ++ G D+MACAQTG
Sbjct: 329 TSSEKTVGIKPCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTG 388
Query: 77 SRKTTPFCFPIINGIM 92
S KT F PI+ ++
Sbjct: 389 SGKTAAFLLPIMTRLI 404
>UNIPROTKB|E2RFF1 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AAEX03006359
Ensembl:ENSCAFT00000020366 Uniprot:E2RFF1
Length = 933
Score = 114 (45.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 23/66 (34%), Positives = 40/66 (60%)
Query: 29 PAARFAYV--PQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFP 86
P + FA+ + L ++ R +Y +PTP+Q + ++GRD++ A+TGS KT F +P
Sbjct: 251 PGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWP 310
Query: 87 IINGIM 92
++ IM
Sbjct: 311 MLIHIM 316
>UNIPROTKB|Q86XP3 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008104 "protein
localization" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AF083255 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008104 GO:GO:0016607 GO:GO:0003723
EMBL:CH471109 GO:GO:0015030 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:P09052 CTD:11325 HOVERGEN:HBG081425 KO:K12835
OrthoDB:EOG47WNN9 EMBL:AB036090 EMBL:AK292908 EMBL:AC015651
EMBL:BC008208 EMBL:BC015505 EMBL:BC078667 EMBL:BC093081
EMBL:AL050096 EMBL:BK000566 IPI:IPI00409671 IPI:IPI00829889
PIR:T08745 RefSeq:NP_031398.2 RefSeq:NP_987095.1 UniGene:Hs.702010
ProteinModelPortal:Q86XP3 SMR:Q86XP3 IntAct:Q86XP3
MINT:MINT-1427725 STRING:Q86XP3 PhosphoSite:Q86XP3 DMDM:74750541
PaxDb:Q86XP3 PRIDE:Q86XP3 Ensembl:ENST00000359353
Ensembl:ENST00000389924 Ensembl:ENST00000457800
Ensembl:ENST00000578681 Ensembl:ENST00000583590 GeneID:11325
KEGG:hsa:11325 UCSC:uc002jbu.3 GeneCards:GC17P061851
HGNC:HGNC:18676 HPA:HPA023447 HPA:HPA023571 HPA:HPA025941
MIM:613369 neXtProt:NX_Q86XP3 PharmGKB:PA134875761
InParanoid:Q86XP3 OMA:QGVNNTA ChiTaRS:DDX42 GenomeRNAi:11325
NextBio:43019 ArrayExpress:Q86XP3 Bgee:Q86XP3 CleanEx:HS_DDX42
Genevestigator:Q86XP3 Uniprot:Q86XP3
Length = 938
Score = 114 (45.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 23/66 (34%), Positives = 40/66 (60%)
Query: 29 PAARFAYV--PQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFP 86
P + FA+ + L ++ R +Y +PTP+Q + ++GRD++ A+TGS KT F +P
Sbjct: 251 PGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWP 310
Query: 87 IINGIM 92
++ IM
Sbjct: 311 MLIHIM 316
>UNIPROTKB|F1RSJ7 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:CU466402 EMBL:CU466386
Ensembl:ENSSSCT00000018821 Uniprot:F1RSJ7
Length = 941
Score = 114 (45.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 23/66 (34%), Positives = 40/66 (60%)
Query: 29 PAARFAYV--PQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFP 86
P + FA+ + L ++ R +Y +PTP+Q + ++GRD++ A+TGS KT F +P
Sbjct: 251 PGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWP 310
Query: 87 IINGIM 92
++ IM
Sbjct: 311 MLIHIM 316
>UNIPROTKB|Q5R7D1 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9601 "Pongo abelii" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0008104 "protein
localization" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008104 GO:GO:0016607 GO:GO:0003723
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
CTD:11325 HOVERGEN:HBG081425 KO:K12835 EMBL:CR860187
RefSeq:NP_001126368.1 UniGene:Pab.3212 ProteinModelPortal:Q5R7D1
GeneID:100173349 KEGG:pon:100173349 Uniprot:Q5R7D1
Length = 942
Score = 114 (45.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 23/66 (34%), Positives = 40/66 (60%)
Query: 29 PAARFAYV--PQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFP 86
P + FA+ + L ++ R +Y +PTP+Q + ++GRD++ A+TGS KT F +P
Sbjct: 251 PGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWP 310
Query: 87 IINGIM 92
++ IM
Sbjct: 311 MLIHIM 316
>UNIPROTKB|F1NJ40 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 IPI:IPI00576529 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AADN02056764
Ensembl:ENSGALT00000000811 ArrayExpress:F1NJ40 Uniprot:F1NJ40
Length = 946
Score = 114 (45.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 23/66 (34%), Positives = 40/66 (60%)
Query: 29 PAARFAYV--PQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFP 86
P + FA+ + L ++ R +Y +PTP+Q + ++GRD++ A+TGS KT F +P
Sbjct: 253 PGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVAMSGRDMIGIAKTGSGKTAAFIWP 312
Query: 87 IINGIM 92
++ IM
Sbjct: 313 MLIHIM 318
>UNIPROTKB|E1BJD2 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:DAAA02049325 IPI:IPI00701280
Ensembl:ENSBTAT00000028046 Uniprot:E1BJD2
Length = 946
Score = 114 (45.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 23/66 (34%), Positives = 40/66 (60%)
Query: 29 PAARFAYV--PQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFP 86
P + FA+ + L ++ R +Y +PTP+Q + ++GRD++ A+TGS KT F +P
Sbjct: 251 PGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWP 310
Query: 87 IINGIM 92
++ IM
Sbjct: 311 MLIHIM 316
>WB|WBGene00001599 [details] [associations]
symbol:glh-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0016070 "RNA metabolic process"
evidence=ISS] [GO:0043186 "P granule" evidence=IDA] [GO:0003724
"RNA helicase activity" evidence=IDA] [GO:0008432 "JUN kinase
binding" evidence=IPI] [GO:0043621 "protein self-association"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0009791
GO:GO:0007281 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
EMBL:FO080958 GO:GO:0043186 GeneTree:ENSGT00620000087942
EMBL:U60194 EMBL:U60449 RefSeq:NP_491876.1
ProteinModelPortal:Q966L9 SMR:Q966L9 IntAct:Q966L9 STRING:Q966L9
PaxDb:Q966L9 EnsemblMetazoa:C55B7.1 GeneID:172361
KEGG:cel:CELE_C55B7.1 UCSC:C55B7.1.2 CTD:172361 WormBase:C55B7.1
HOGENOM:HOG000112735 InParanoid:Q966L9 OMA:PREGRNG NextBio:875199
Uniprot:Q966L9
Length = 974
Score = 114 (45.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 49 YVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMRE 94
Y K TP+Q++ ++ G D+MACAQTGS KT F PI+ ++ E
Sbjct: 572 YTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMARLIDE 617
>UNIPROTKB|Q966L9 [details] [associations]
symbol:glh-2 "ATP-dependent RNA helicase glh-2"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0009791
GO:GO:0007281 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
EMBL:FO080958 GO:GO:0043186 GeneTree:ENSGT00620000087942
EMBL:U60194 EMBL:U60449 RefSeq:NP_491876.1
ProteinModelPortal:Q966L9 SMR:Q966L9 IntAct:Q966L9 STRING:Q966L9
PaxDb:Q966L9 EnsemblMetazoa:C55B7.1 GeneID:172361
KEGG:cel:CELE_C55B7.1 UCSC:C55B7.1.2 CTD:172361 WormBase:C55B7.1
HOGENOM:HOG000112735 InParanoid:Q966L9 OMA:PREGRNG NextBio:875199
Uniprot:Q966L9
Length = 974
Score = 114 (45.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 49 YVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMRE 94
Y K TP+Q++ ++ G D+MACAQTGS KT F PI+ ++ E
Sbjct: 572 YTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMARLIDE 617
>TAIR|locus:2065215 [details] [associations]
symbol:AT2G47330 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003723 EMBL:AC002337 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 UniGene:At.12226 UniGene:At.25582
HOGENOM:HOG000268793 KO:K12835 EMBL:AY057700 EMBL:AY124871
IPI:IPI00516775 PIR:H84913 RefSeq:NP_566099.1
ProteinModelPortal:O22907 SMR:O22907 STRING:O22907 PaxDb:O22907
PRIDE:O22907 EnsemblPlants:AT2G47330.1 GeneID:819346
KEGG:ath:AT2G47330 GeneFarm:942 TAIR:At2g47330 InParanoid:O22907
OMA:QEYANLM PhylomeDB:O22907 ProtClustDB:CLSN2688982
Genevestigator:O22907 GermOnline:AT2G47330 Uniprot:O22907
Length = 760
Score = 102 (41.0 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 23/53 (43%), Positives = 32/53 (60%)
Query: 49 YVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYYSARKE 101
Y KPT +Q A I+++GRD++ A+TGS KT F P+I IM + R E
Sbjct: 248 YEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVHIMDQPELQRDE 300
Score = 56 (24.8 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 16/53 (30%), Positives = 31/53 (58%)
Query: 97 SARKELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
S ++ +EL + ++AT RL+++L+ +++ M YL L EA D+ D+
Sbjct: 340 SKHEQFKELKAGCEIVVATPGRLIDMLKMKALTM-MRASYLVLDEA-DRMFDL 390
>UNIPROTKB|Q0C4B9 [details] [associations]
symbol:HNE_0695 "Putative ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
RefSeq:YP_759424.1 ProteinModelPortal:Q0C4B9 STRING:Q0C4B9
GeneID:4287361 KEGG:hne:HNE_0695 PATRIC:32214196 OMA:LPMITIL
BioCyc:HNEP228405:GI69-738-MONOMER Uniprot:Q0C4B9
Length = 536
Score = 91 (37.1 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 49 YVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPII 88
Y PTP+QR A ++ G D+ AQTG+ KT F P+I
Sbjct: 24 YTIPTPIQREAIPHILMGGDVTGVAQTGTGKTAAFVLPMI 63
Score = 69 (29.3 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 105 LARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
L R VD L+AT RL++ +RG++ L M + L + EA D+ LDM
Sbjct: 122 LQRGVDVLIATPGRLMDQFDRGKL-LMMGVETLIIDEA-DRMLDM 164
>UNIPROTKB|Q7L014 [details] [associations]
symbol:DDX46 "Probable ATP-dependent RNA helicase DDX46"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0015030 "Cajal body" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0016607 GO:GO:0006397 GO:GO:0003723
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K12811 EMBL:AF106680 EMBL:AB018344 EMBL:BC012304 EMBL:BK000565
IPI:IPI00329791 RefSeq:NP_055644.2 UniGene:Hs.406549
ProteinModelPortal:Q7L014 SMR:Q7L014 IntAct:Q7L014
MINT:MINT-3002486 STRING:Q7L014 PhosphoSite:Q7L014 DMDM:116241326
PaxDb:Q7L014 PeptideAtlas:Q7L014 PRIDE:Q7L014
Ensembl:ENST00000354283 Ensembl:ENST00000452510 GeneID:9879
KEGG:hsa:9879 UCSC:uc003kzw.3 CTD:9879 GeneCards:GC05P134094
HGNC:HGNC:18681 HPA:HPA036554 neXtProt:NX_Q7L014
PharmGKB:PA134894452 HOGENOM:HOG000007229 HOVERGEN:HBG081426
InParanoid:Q7L014 OrthoDB:EOG441Q9T ChiTaRS:DDX46 GenomeRNAi:9879
NextBio:37233 PMAP-CutDB:Q7L014 ArrayExpress:Q7L014 Bgee:Q7L014
CleanEx:HS_DDX46 Genevestigator:Q7L014 GermOnline:ENSG00000145833
Uniprot:Q7L014
Length = 1031
Score = 113 (44.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 22/57 (38%), Positives = 33/57 (57%)
Query: 36 VPQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIM 92
+ + N + + Y KPTP+Q A +++GRDL+ A+TGS KT F P+ IM
Sbjct: 379 ISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIM 435
>UNIPROTKB|F1MX40 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:DAAA02020348
EMBL:DAAA02020349 IPI:IPI00703383 Ensembl:ENSBTAT00000028682
Uniprot:F1MX40
Length = 1032
Score = 113 (44.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 22/57 (38%), Positives = 33/57 (57%)
Query: 36 VPQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIM 92
+ + N + + Y KPTP+Q A +++GRDL+ A+TGS KT F P+ IM
Sbjct: 379 ISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIM 435
>UNIPROTKB|F1PK90 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AAEX03007786
Ensembl:ENSCAFT00000001619 Uniprot:F1PK90
Length = 1032
Score = 113 (44.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 22/57 (38%), Positives = 33/57 (57%)
Query: 36 VPQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIM 92
+ + N + + Y KPTP+Q A +++GRDL+ A+TGS KT F P+ IM
Sbjct: 379 ISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIM 435
>UNIPROTKB|I3LR20 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:FP312757
Ensembl:ENSSSCT00000027801 Uniprot:I3LR20
Length = 1032
Score = 113 (44.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 22/57 (38%), Positives = 33/57 (57%)
Query: 36 VPQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIM 92
+ + N + + Y KPTP+Q A +++GRDL+ A+TGS KT F P+ IM
Sbjct: 379 ISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIM 435
>MGI|MGI:1920895 [details] [associations]
symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1920895
GO:GO:0005524 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
OrthoDB:EOG441Q9T ChiTaRS:DDX46 EMBL:AK129220 EMBL:BC026492
EMBL:BC092240 IPI:IPI00468896 IPI:IPI00660556 RefSeq:NP_666087.3
UniGene:Mm.202725 ProteinModelPortal:Q569Z5 SMR:Q569Z5
STRING:Q569Z5 PhosphoSite:Q569Z5 PaxDb:Q569Z5 PRIDE:Q569Z5
Ensembl:ENSMUST00000172272 GeneID:212880 KEGG:mmu:212880
UCSC:uc011yzx.1 InParanoid:Q569Z5 OMA:IEEENKF NextBio:373723
Bgee:Q569Z5 CleanEx:MM_DDX46 Genevestigator:Q569Z5
GermOnline:ENSMUSG00000021500 Uniprot:Q569Z5
Length = 1032
Score = 113 (44.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 22/57 (38%), Positives = 33/57 (57%)
Query: 36 VPQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIM 92
+ + N + + Y KPTP+Q A +++GRDL+ A+TGS KT F P+ IM
Sbjct: 379 ISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIM 435
>RGD|708480 [details] [associations]
symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0015030 "Cajal body" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:708480
GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0003723 GO:GO:0015030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 KO:K12811 CTD:9879
HOGENOM:HOG000007229 HOVERGEN:HBG081426 OrthoDB:EOG441Q9T
EMBL:U25746 EMBL:BC107590 IPI:IPI00208266 PIR:A57514
RefSeq:NP_620798.1 UniGene:Rn.3436 ProteinModelPortal:Q62780
STRING:Q62780 PhosphoSite:Q62780 PRIDE:Q62780
Ensembl:ENSRNOT00000029885 GeneID:245957 KEGG:rno:245957
UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
ArrayExpress:Q62780 Genevestigator:Q62780
GermOnline:ENSRNOG00000021637 Uniprot:Q62780
Length = 1032
Score = 113 (44.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 22/57 (38%), Positives = 33/57 (57%)
Query: 36 VPQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIM 92
+ + N + + Y KPTP+Q A +++GRDL+ A+TGS KT F P+ IM
Sbjct: 379 ISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIM 435
>UNIPROTKB|Q62780 [details] [associations]
symbol:Ddx46 "Probable ATP-dependent RNA helicase DDX46"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:708480 GO:GO:0005524
GO:GO:0005634 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
OrthoDB:EOG441Q9T EMBL:U25746 EMBL:BC107590 IPI:IPI00208266
PIR:A57514 RefSeq:NP_620798.1 UniGene:Rn.3436
ProteinModelPortal:Q62780 STRING:Q62780 PhosphoSite:Q62780
PRIDE:Q62780 Ensembl:ENSRNOT00000029885 GeneID:245957
KEGG:rno:245957 UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
ArrayExpress:Q62780 Genevestigator:Q62780
GermOnline:ENSRNOG00000021637 Uniprot:Q62780
Length = 1032
Score = 113 (44.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 22/57 (38%), Positives = 33/57 (57%)
Query: 36 VPQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIM 92
+ + N + + Y KPTP+Q A +++GRDL+ A+TGS KT F P+ IM
Sbjct: 379 ISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIM 435
>UNIPROTKB|Q83DM8 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE016828 GenomeReviews:AE016828_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8 GeneID:1208557
KEGG:cbu:CBU_0670 PATRIC:17930019 ProtClustDB:CLSK914228
BioCyc:CBUR227377:GJ7S-666-MONOMER Uniprot:Q83DM8
Length = 420
Score = 112 (44.5 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 45 RTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPII 88
R YV+PTPVQR A +++ RD+M AQTG+ KT F P++
Sbjct: 26 REQGYVEPTPVQRQAIPVILQARDVMVTAQTGTGKTAGFTLPLL 69
>TIGR_CMR|CBU_0670 [details] [associations]
symbol:CBU_0670 "ATP-dependent RNA helicase RhlE,
putative" species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:HLIKQHN RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8
GeneID:1208557 KEGG:cbu:CBU_0670 PATRIC:17930019
ProtClustDB:CLSK914228 BioCyc:CBUR227377:GJ7S-666-MONOMER
Uniprot:Q83DM8
Length = 420
Score = 112 (44.5 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 45 RTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPII 88
R YV+PTPVQR A +++ RD+M AQTG+ KT F P++
Sbjct: 26 REQGYVEPTPVQRQAIPVILQARDVMVTAQTGTGKTAGFTLPLL 69
>UNIPROTKB|P25888 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0042255 "ribosome assembly" evidence=IGI]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IDA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003723
GO:GO:0005840 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0042255 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:L02123 HOGENOM:HOG000268807 EMBL:X56307
PIR:E64816 RefSeq:NP_415318.1 RefSeq:YP_489070.1
ProteinModelPortal:P25888 SMR:P25888 DIP:DIP-10697N IntAct:P25888
MINT:MINT-1313387 PRIDE:P25888 EnsemblBacteria:EBESCT00000003075
EnsemblBacteria:EBESCT00000017437 GeneID:12930968 GeneID:945425
KEGG:ecj:Y75_p0770 KEGG:eco:b0797 PATRIC:32116795 EchoBASE:EB1217
EcoGene:EG11235 KO:K11927 OMA:HLIKQHN ProtClustDB:PRK10590
BioCyc:EcoCyc:EG11235-MONOMER BioCyc:ECOL316407:JW0781-MONOMER
Genevestigator:P25888 Uniprot:P25888
Length = 454
Score = 112 (44.5 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 24/59 (40%), Positives = 39/59 (66%)
Query: 49 YVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIM-REYYS-ARKELREL 105
Y +PTP+Q+ A ++ GRDLMA AQTG+ KT F P++ ++ R+ ++ R+ +R L
Sbjct: 21 YREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQPHAKGRRPVRAL 79
>TIGR_CMR|GSU_0491 [details] [associations]
symbol:GSU_0491 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
RefSeq:NP_951550.1 ProteinModelPortal:Q74FW1 GeneID:2686040
KEGG:gsu:GSU0491 PATRIC:22023733 OMA:TTHEHIE ProtClustDB:CLSK827872
BioCyc:GSUL243231:GH27-490-MONOMER Uniprot:Q74FW1
Length = 450
Score = 85 (35.0 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 18/40 (45%), Positives = 23/40 (57%)
Query: 49 YVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPII 88
Y +PTPVQ A + DL+A AQTG+ KT F P +
Sbjct: 21 YTEPTPVQAAAVPRALENVDLLATAQTGTGKTAAFVLPAL 60
Score = 73 (30.8 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 101 ELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDMALN 152
+LR L+ VD ++AT RLV+LL+R + L + L L EA D+ LDM +
Sbjct: 116 QLRLLSAPVDFIVATPGRLVDLLDRRSLDLSRL-ELLVLDEA-DRMLDMGFS 165
>TIGR_CMR|SPO_1443 [details] [associations]
symbol:SPO_1443 "ATP-dependent RNA helicase RhlE"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_166684.1
ProteinModelPortal:Q5LTH1 GeneID:3193638 KEGG:sil:SPO1443
PATRIC:23376201 OMA:VPTHAED ProtClustDB:CLSK933557 Uniprot:Q5LTH1
Length = 471
Score = 94 (38.1 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 21/51 (41%), Positives = 28/51 (54%)
Query: 49 YVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYYSAR 99
Y PTP+Q A + GRD++ AQTG+ KT F P+I + R AR
Sbjct: 22 YETPTPIQAGAIPPALEGRDVLGIAQTGTGKTASFTLPMITLLARGRARAR 72
Score = 61 (26.5 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 107 RWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
R VD L+AT RL++ ERG++ L + + + + EA D+ LDM
Sbjct: 122 RGVDVLIATPGRLLDHFERGKLLLTGV-QIMVVDEA-DRMLDM 162
>GENEDB_PFALCIPARUM|PF14_0437 [details] [associations]
symbol:PF14_0437 "helicase, truncated,
putative" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014187 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
RefSeq:XP_001348611.2 ProteinModelPortal:Q8IL13 IntAct:Q8IL13
MINT:MINT-1661155 PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA
GeneID:812019 KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
Length = 527
Score = 92 (37.4 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 26/86 (30%), Positives = 40/86 (46%)
Query: 9 SVFASENAAPASSSTNTLSSPAARFAYVPQHLRNKPRTYKYVKPTPVQRHATSILVAGRD 68
++ EN S N + P YV + L+N V PTP+Q I ++G+D
Sbjct: 101 TILEGENVPKPVVSINKIGFPD----YVIKSLKNN----NIVAPTPIQIQGWPIALSGKD 152
Query: 69 LMACAQTGSRKTTPFCFPIINGIMRE 94
++ A+TGS KT F P I+ +
Sbjct: 153 MIGKAETGSGKTLAFILPAFVHILAQ 178
Score = 65 (27.9 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 101 ELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
++ L + V L+A RL++LLE+ +L M + YL L EA D+ LDM
Sbjct: 229 QIYALKQGVHILIACPGRLIDLLEQNVTNL-MRVTYLVLDEA-DKMLDM 275
>UNIPROTKB|Q8IL13 [details] [associations]
symbol:PF14_0437 "Helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014187
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_001348611.2
ProteinModelPortal:Q8IL13 IntAct:Q8IL13 MINT:MINT-1661155
PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA GeneID:812019
KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
Length = 527
Score = 92 (37.4 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 26/86 (30%), Positives = 40/86 (46%)
Query: 9 SVFASENAAPASSSTNTLSSPAARFAYVPQHLRNKPRTYKYVKPTPVQRHATSILVAGRD 68
++ EN S N + P YV + L+N V PTP+Q I ++G+D
Sbjct: 101 TILEGENVPKPVVSINKIGFPD----YVIKSLKNN----NIVAPTPIQIQGWPIALSGKD 152
Query: 69 LMACAQTGSRKTTPFCFPIINGIMRE 94
++ A+TGS KT F P I+ +
Sbjct: 153 MIGKAETGSGKTLAFILPAFVHILAQ 178
Score = 65 (27.9 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 101 ELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
++ L + V L+A RL++LLE+ +L M + YL L EA D+ LDM
Sbjct: 229 QIYALKQGVHILIACPGRLIDLLEQNVTNL-MRVTYLVLDEA-DKMLDM 275
>CGD|CAL0000864 [details] [associations]
symbol:DRS1 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0000864 GO:GO:0005524
GO:GO:0005730 GO:GO:0042254 GO:GO:0003723 GO:GO:0035690
EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K13181 RefSeq:XP_719395.1 ProteinModelPortal:Q5ACK7
STRING:Q5ACK7 GeneID:3639045 KEGG:cal:CaO19.7635 Uniprot:Q5ACK7
Length = 613
Score = 112 (44.5 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 31/84 (36%), Positives = 45/84 (53%)
Query: 48 KYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYYSARKEL----- 102
K+ KPTP+Q + I + G+D++A AQTGS KT + PII ++ + ++ K +
Sbjct: 149 KFTKPTPIQSASIPIALLGKDIVAGAQTGSGKTGAYMIPIIERLLYKPSTSTKVIILTPT 208
Query: 103 RELARWVDNLMATLRRLVNLLERG 126
RELA V L VN L G
Sbjct: 209 RELALQVYEFGKKLSHHVNNLNIG 232
>UNIPROTKB|Q5ACK7 [details] [associations]
symbol:DRS1 "ATP-dependent RNA helicase DRS1"
species:237561 "Candida albicans SC5314" [GO:0035690 "cellular
response to drug" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0000864
GO:GO:0005524 GO:GO:0005730 GO:GO:0042254 GO:GO:0003723
GO:GO:0035690 EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K13181 RefSeq:XP_719395.1
ProteinModelPortal:Q5ACK7 STRING:Q5ACK7 GeneID:3639045
KEGG:cal:CaO19.7635 Uniprot:Q5ACK7
Length = 613
Score = 112 (44.5 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 31/84 (36%), Positives = 45/84 (53%)
Query: 48 KYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYYSARKEL----- 102
K+ KPTP+Q + I + G+D++A AQTGS KT + PII ++ + ++ K +
Sbjct: 149 KFTKPTPIQSASIPIALLGKDIVAGAQTGSGKTGAYMIPIIERLLYKPSTSTKVIILTPT 208
Query: 103 RELARWVDNLMATLRRLVNLLERG 126
RELA V L VN L G
Sbjct: 209 RELALQVYEFGKKLSHHVNNLNIG 232
>MGI|MGI:1915005 [details] [associations]
symbol:Ddx47 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 47"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1915005
GO:GO:0005524 GO:GO:0006915 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268802
GeneTree:ENSGT00670000098028 CTD:51202 HOVERGEN:HBG100512 KO:K14777
OMA:IFIPSKF OrthoDB:EOG4TXBRS ChiTaRS:DDX47 EMBL:AK010310
EMBL:AK076982 IPI:IPI00187240 RefSeq:NP_080636.2 UniGene:Mm.166524
ProteinModelPortal:Q9CWX9 SMR:Q9CWX9 IntAct:Q9CWX9
PhosphoSite:Q9CWX9 PaxDb:Q9CWX9 PRIDE:Q9CWX9
Ensembl:ENSMUST00000032326 GeneID:67755 KEGG:mmu:67755
InParanoid:Q9CWX9 NextBio:325481 Bgee:Q9CWX9 CleanEx:MM_DDX47
Genevestigator:Q9CWX9 GermOnline:ENSMUSG00000030204 Uniprot:Q9CWX9
Length = 455
Score = 100 (40.3 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 18/44 (40%), Positives = 28/44 (63%)
Query: 49 YVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIM 92
+ KPT +Q A + + GRD++ A+TGS KT F PI+N ++
Sbjct: 44 WAKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNALL 87
Score = 48 (22.0 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 19/66 (28%), Positives = 33/66 (50%)
Query: 84 CFPIINGIMREYYSARKELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAA 143
C I+ GI + + LA+ ++AT RL++ LE + ++YL + EA
Sbjct: 123 CAVIVGGI-----DSMSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEA- 176
Query: 144 DQTLDM 149
D+ L+M
Sbjct: 177 DRILNM 182
>UNIPROTKB|G3V727 [details] [associations]
symbol:Ddx47 "Protein Ddx47" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 EMBL:CH473964
GeneTree:ENSGT00670000098028 CTD:51202 KO:K14777 OMA:IFIPSKF
RefSeq:NP_001015005.2 UniGene:Rn.73790 Ensembl:ENSRNOT00000011096
GeneID:297685 KEGG:rno:297685 RGD:1310437 NextBio:642541
Uniprot:G3V727
Length = 455
Score = 100 (40.3 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 18/44 (40%), Positives = 28/44 (63%)
Query: 49 YVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIM 92
+ KPT +Q A + + GRD++ A+TGS KT F PI+N ++
Sbjct: 44 WAKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNALL 87
Score = 48 (22.0 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 19/66 (28%), Positives = 33/66 (50%)
Query: 84 CFPIINGIMREYYSARKELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAA 143
C I+ GI + + LA+ ++AT RL++ LE + ++YL + EA
Sbjct: 123 CAVIVGGI-----DSMSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEA- 176
Query: 144 DQTLDM 149
D+ L+M
Sbjct: 177 DRILNM 182
>RGD|1359520 [details] [associations]
symbol:Ddx59 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 59"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 RGD:1359520 GO:GO:0005524
GO:GO:0046872 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 PROSITE:PS51083
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q5STU4 GeneTree:ENSGT00610000086076 CTD:83479
HOGENOM:HOG000006599 HOVERGEN:HBG106120 EMBL:BC081871
IPI:IPI00371561 RefSeq:NP_001005535.1 RefSeq:NP_001177749.1
UniGene:Rn.230507 UniGene:Rn.34313 ProteinModelPortal:Q66HG7
SMR:Q66HG7 PhosphoSite:Q66HG7 PRIDE:Q66HG7
Ensembl:ENSRNOT00000043798 GeneID:289402 KEGG:rno:289402
UCSC:RGD:1359520 NextBio:629792 ArrayExpress:Q66HG7
Genevestigator:Q66HG7 Uniprot:Q66HG7
Length = 589
Score = 111 (44.1 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 39/126 (30%), Positives = 55/126 (43%)
Query: 37 PQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYY 96
P+ L + Y PTP+Q + + GRD++A A TGS KT F P+I + E
Sbjct: 211 PETLNQNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVIIRALPEDK 270
Query: 97 SARKEL----RELA----RWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLD 148
+ + RELA R LM L R+ +L G + L + L AD L
Sbjct: 271 TPSALILTPTRELAIQIERQAKELMRGLPRMKTVLLVGGLPLPPQLYRLQQHVKADTMLK 330
Query: 149 MALNQK 154
M Q+
Sbjct: 331 MGFQQQ 336
>UNIPROTKB|Q66HG7 [details] [associations]
symbol:Ddx59 "Probable ATP-dependent RNA helicase DDX59"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 RGD:1359520
GO:GO:0005524 GO:GO:0046872 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438
PROSITE:PS51083 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q5STU4 GeneTree:ENSGT00610000086076 CTD:83479
HOGENOM:HOG000006599 HOVERGEN:HBG106120 EMBL:BC081871
IPI:IPI00371561 RefSeq:NP_001005535.1 RefSeq:NP_001177749.1
UniGene:Rn.230507 UniGene:Rn.34313 ProteinModelPortal:Q66HG7
SMR:Q66HG7 PhosphoSite:Q66HG7 PRIDE:Q66HG7
Ensembl:ENSRNOT00000043798 GeneID:289402 KEGG:rno:289402
UCSC:RGD:1359520 NextBio:629792 ArrayExpress:Q66HG7
Genevestigator:Q66HG7 Uniprot:Q66HG7
Length = 589
Score = 111 (44.1 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 39/126 (30%), Positives = 55/126 (43%)
Query: 37 PQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYY 96
P+ L + Y PTP+Q + + GRD++A A TGS KT F P+I + E
Sbjct: 211 PETLNQNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVIIRALPEDK 270
Query: 97 SARKEL----RELA----RWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLD 148
+ + RELA R LM L R+ +L G + L + L AD L
Sbjct: 271 TPSALILTPTRELAIQIERQAKELMRGLPRMKTVLLVGGLPLPPQLYRLQQHVKADTMLK 330
Query: 149 MALNQK 154
M Q+
Sbjct: 331 MGFQQQ 336
>UNIPROTKB|I3L976 [details] [associations]
symbol:DDX47 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00670000098028
OMA:IFIPSKF Ensembl:ENSSSCT00000025539 Uniprot:I3L976
Length = 456
Score = 100 (40.3 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 18/44 (40%), Positives = 28/44 (63%)
Query: 49 YVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIM 92
+ KPT +Q A + + GRD++ A+TGS KT F PI+N ++
Sbjct: 43 WTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNALL 86
Score = 48 (22.0 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 19/66 (28%), Positives = 33/66 (50%)
Query: 84 CFPIINGIMREYYSARKELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAA 143
C I+ GI + + LA+ ++AT RL++ LE + ++YL + EA
Sbjct: 122 CAVIVGGI-----DSMSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEA- 175
Query: 144 DQTLDM 149
D+ L+M
Sbjct: 176 DRILNM 181
>UNIPROTKB|Q29S22 [details] [associations]
symbol:DDX47 "Probable ATP-dependent RNA helicase DDX47"
species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=ISS]
[GO:0008380 "RNA splicing" evidence=ISS] [GO:0006915 "apoptotic
process" evidence=ISS] [GO:0006364 "rRNA processing" evidence=ISS]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006915 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 EMBL:BC113207
IPI:IPI00688068 RefSeq:NP_001039850.1 UniGene:Bt.23258
ProteinModelPortal:Q29S22 SMR:Q29S22 PRIDE:Q29S22
Ensembl:ENSBTAT00000003058 GeneID:534721 KEGG:bta:534721 CTD:51202
HOVERGEN:HBG100512 InParanoid:Q29S22 KO:K14777 OMA:IFIPSKF
OrthoDB:EOG4TXBRS NextBio:20876515 Uniprot:Q29S22
Length = 457
Score = 100 (40.3 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 18/44 (40%), Positives = 28/44 (63%)
Query: 49 YVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIM 92
+ KPT +Q A + + GRD++ A+TGS KT F PI+N ++
Sbjct: 46 WTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNALL 89
Score = 48 (22.0 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 19/66 (28%), Positives = 33/66 (50%)
Query: 84 CFPIINGIMREYYSARKELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAA 143
C I+ GI + + LA+ ++AT RL++ LE + ++YL + EA
Sbjct: 125 CAVIVGGI-----DSMSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEA- 178
Query: 144 DQTLDM 149
D+ L+M
Sbjct: 179 DRILNM 184
>UNIPROTKB|Q9H0S4 [details] [associations]
symbol:DDX47 "Probable ATP-dependent RNA helicase DDX47"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006915 "apoptotic process" evidence=IDA]
[GO:0008380 "RNA splicing" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006915 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 GO:GO:0003723
EMBL:CH471094 UniGene:Hs.719938 GermOnline:ENSG00000178878
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 CTD:51202 HOVERGEN:HBG100512 KO:K14777
OMA:IFIPSKF EMBL:AF078843 EMBL:AL136666 EMBL:AK054574 EMBL:AK127712
EMBL:AC007215 EMBL:BC009379 EMBL:BC068009 IPI:IPI00023972
IPI:IPI00397372 RefSeq:NP_057439.2 RefSeq:NP_957518.1 PDB:3BER
PDBsum:3BER ProteinModelPortal:Q9H0S4 SMR:Q9H0S4 IntAct:Q9H0S4
MINT:MINT-3056694 STRING:Q9H0S4 PhosphoSite:Q9H0S4 DMDM:52782792
SWISS-2DPAGE:Q9H0S4 PaxDb:Q9H0S4 PRIDE:Q9H0S4 DNASU:51202
Ensembl:ENST00000352940 Ensembl:ENST00000358007 GeneID:51202
KEGG:hsa:51202 UCSC:uc001rav.3 GeneCards:GC12P012966
HGNC:HGNC:18682 HPA:HPA014855 neXtProt:NX_Q9H0S4
PharmGKB:PA134918403 InParanoid:Q9H0S4 PhylomeDB:Q9H0S4
ChiTaRS:DDX47 EvolutionaryTrace:Q9H0S4 GenomeRNAi:51202
NextBio:54238 ArrayExpress:Q9H0S4 Bgee:Q9H0S4 CleanEx:HS_DDX47
Genevestigator:Q9H0S4 Uniprot:Q9H0S4
Length = 455
Score = 100 (40.3 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 18/44 (40%), Positives = 28/44 (63%)
Query: 49 YVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIM 92
+ KPT +Q A + + GRD++ A+TGS KT F PI+N ++
Sbjct: 44 WTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNALL 87
Score = 47 (21.6 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 105 LARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
LA+ ++AT RL++ LE + ++YL + EA D+ L+M
Sbjct: 139 LAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEA-DRILNM 182
>UNIPROTKB|F1NQA6 [details] [associations]
symbol:DDX52 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00550000074863 EMBL:AADN02025730
IPI:IPI00822952 Ensembl:ENSGALT00000039070 ArrayExpress:F1NQA6
Uniprot:F1NQA6
Length = 603
Score = 110 (43.8 bits), Expect = 0.00011, P = 0.00011
Identities = 31/114 (27%), Positives = 54/114 (47%)
Query: 26 LSSPAARFAYVPQHLRNKPRTYKYVK------PTPVQRHATSILVAGRDLMACAQTGSRK 79
L P A F + + + P+ + ++ PTP+Q A +++ GR+L+A A TGS K
Sbjct: 150 LPDPIATFDQLQKEYKIHPKVIENIQAAGFQVPTPIQMQAIPVMLHGRELLASAPTGSGK 209
Query: 80 TTPFCFPIINGIMREYYSARKELRELARWVDNLMATLRRLVNLLERGRVSLQMI 133
T FC P++ + + + L ++ + T R LV L + + MI
Sbjct: 210 TLAFCIPLLTHLKQPMNKGFRALI-ISPTRELASQTHRELVKLADGTGFRIHMI 262
>UNIPROTKB|E1C4M1 [details] [associations]
symbol:DDX52 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00550000074863 OMA:NVMKQSG
EMBL:AADN02025730 IPI:IPI00593921 ProteinModelPortal:E1C4M1
Ensembl:ENSGALT00000008815 ArrayExpress:E1C4M1 Uniprot:E1C4M1
Length = 604
Score = 110 (43.8 bits), Expect = 0.00011, P = 0.00011
Identities = 31/114 (27%), Positives = 54/114 (47%)
Query: 26 LSSPAARFAYVPQHLRNKPRTYKYVK------PTPVQRHATSILVAGRDLMACAQTGSRK 79
L P A F + + + P+ + ++ PTP+Q A +++ GR+L+A A TGS K
Sbjct: 150 LPDPIATFDQLQKEYKIHPKVIENIQAAGFQVPTPIQMQAIPVMLHGRELLASAPTGSGK 209
Query: 80 TTPFCFPIINGIMREYYSARKELRELARWVDNLMATLRRLVNLLERGRVSLQMI 133
T FC P++ + + + L ++ + T R LV L + + MI
Sbjct: 210 TLAFCIPLLTHLKQPMNKGFRALI-ISPTRELASQTHRELVKLADGTGFRIHMI 262
>DICTYBASE|DDB_G0275443 [details] [associations]
symbol:helB1 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0275443 GO:GO:0005524
GO:GO:0006397 GenomeReviews:CM000151_GR GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0000375 HSSP:P09052 EMBL:X81823 RefSeq:XP_643509.1
ProteinModelPortal:Q553B1 PRIDE:Q553B1 EnsemblProtists:DDB0191329
GeneID:8620090 KEGG:ddi:DDB_G0275443 KO:K12811 OMA:SVVAPEI
ProtClustDB:CLSZ2500419 Uniprot:Q553B1
Length = 1151
Score = 100 (40.3 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 45 RTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYYSARKE 101
+ ++Y KPT +Q ++ GRDL+ A+TGS KT F P+ I+ + SA E
Sbjct: 525 KKFQYEKPTSIQAQTIPAIMNGRDLIGIARTGSGKTLAFLLPMFRHILAQPKSAPGE 581
Score = 55 (24.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 16/55 (29%), Positives = 30/55 (54%)
Query: 97 SARKELRELARWVDNLMATLRRLVNLL--ERGRVSLQMIIRYLALKEAADQTLDM 149
S +++ EL R D ++ T R++++L R++ + +L L EA D+ DM
Sbjct: 621 SISEQIAELKRGADIVVCTPGRMIDILCANNRRITNLRRVTFLVLDEA-DRMFDM 674
>UNIPROTKB|E2RN03 [details] [associations]
symbol:DDX47 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00670000098028
OMA:IFIPSKF EMBL:AAEX03015248 Ensembl:ENSCAFT00000020996
NextBio:20853120 Uniprot:E2RN03
Length = 482
Score = 100 (40.3 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 18/44 (40%), Positives = 28/44 (63%)
Query: 49 YVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIM 92
+ KPT +Q A + + GRD++ A+TGS KT F PI+N ++
Sbjct: 70 WTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNALL 113
Score = 46 (21.3 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 105 LARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
LA+ ++AT RL++ LE + ++YL + EA D+ L+M
Sbjct: 165 LAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEA-DRILNM 208
>RGD|1311124 [details] [associations]
symbol:Ddx49 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 49"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1311124 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:EVRTVEQ
GeneTree:ENSGT00670000098028 IPI:IPI00362462 PRIDE:E9PTF0
Ensembl:ENSRNOT00000004891 UCSC:RGD:1311124 Uniprot:E9PTF0
Length = 480
Score = 101 (40.6 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 51 KPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYY 96
+PTPVQ ++ GRD + CA+TGS KT F PI+ + + Y
Sbjct: 24 QPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQKLSEDPY 69
Score = 44 (20.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 104 ELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLD 148
EL+R ++AT RL + L IR+L L EA D+ L+
Sbjct: 116 ELSRKPHVVIATPGRLADHLRSSNTFNMKKIRFLVLDEA-DRLLE 159
>TAIR|locus:2034481 [details] [associations]
symbol:STRS1 "STRESS RESPONSE SUPPRESSOR 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0001510
"RNA methylation" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005730
EMBL:AC079041 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K14811
OMA:DRILVFC EMBL:AC074309 EMBL:AY080680 EMBL:AY117298 EMBL:AJ010458
IPI:IPI00547293 PIR:A86444 PIR:T51739 RefSeq:NP_174479.1
UniGene:At.20258 ProteinModelPortal:Q9C551 SMR:Q9C551 STRING:Q9C551
PaxDb:Q9C551 PRIDE:Q9C551 EnsemblPlants:AT1G31970.1 GeneID:840087
KEGG:ath:AT1G31970 GeneFarm:911 TAIR:At1g31970 InParanoid:Q9C551
PhylomeDB:Q9C551 ProtClustDB:CLSN2682598 Genevestigator:Q9C551
GermOnline:AT1G31970 Uniprot:Q9C551
Length = 537
Score = 104 (41.7 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 21/59 (35%), Positives = 38/59 (64%)
Query: 36 VPQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMRE 94
+P+++ + +T++ KP+P+Q H L+ GRDL+ A+TGS KT F P I ++++
Sbjct: 123 LPENVLDCCKTFE--KPSPIQSHTWPFLLDGRDLIGIAKTGSGKTLAFGIPAIMHVLKK 179
Score = 40 (19.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 14/58 (24%), Positives = 29/58 (50%)
Query: 97 SARKELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDMALNQK 154
+A ++ ++ +D A +RL+ LLE+ S + + AL + + L+ L Q+
Sbjct: 333 AANHDVMQIIEVLDE-RARDQRLIALLEKYHKSQKNRVLVFALYKVEAERLERFLQQR 389
>UNIPROTKB|H0YI52 [details] [associations]
symbol:DDX23 "Probable ATP-dependent RNA helicase DDX23"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR011545
Pfam:PF00270 GO:GO:0005524 GO:GO:0003676 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HGNC:HGNC:17347 EMBL:AC117498
Ensembl:ENST00000552802 Uniprot:H0YI52
Length = 152
Score = 100 (40.3 bits), Expect = 0.00017, P = 0.00017
Identities = 20/53 (37%), Positives = 30/53 (56%)
Query: 36 VPQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPII 88
+P H+ Y +PTP+QR A I + RD++ A+TGS KT F P++
Sbjct: 24 LPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLL 76
>UNIPROTKB|Q8EHT1 [details] [associations]
symbol:SO_1136 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_716761.1 ProteinModelPortal:Q8EHT1 GeneID:1168967
KEGG:son:SO_1136 PATRIC:23521912 OMA:IGAKENA ProtClustDB:CLSK869861
Uniprot:Q8EHT1
Length = 447
Score = 91 (37.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 52 PTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPII 88
PT VQ+ A ++AGRDL+A +QTGS KT F P++
Sbjct: 39 PTRVQQLAIPAILAGRDLLALSQTGSGKTFAFGLPLL 75
Score = 57 (25.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 17/50 (34%), Positives = 31/50 (62%)
Query: 100 KELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
++L +L+ ++AT RL++L + +SL I ++L L EA D+ L+M
Sbjct: 141 QQLADLSAKPQLVVATPGRLLDLCTQSHISLDAI-KHLVLDEA-DRLLEM 188
>TIGR_CMR|SO_1136 [details] [associations]
symbol:SO_1136 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_716761.1 ProteinModelPortal:Q8EHT1 GeneID:1168967
KEGG:son:SO_1136 PATRIC:23521912 OMA:IGAKENA ProtClustDB:CLSK869861
Uniprot:Q8EHT1
Length = 447
Score = 91 (37.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 52 PTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPII 88
PT VQ+ A ++AGRDL+A +QTGS KT F P++
Sbjct: 39 PTRVQQLAIPAILAGRDLLALSQTGSGKTFAFGLPLL 75
Score = 57 (25.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 17/50 (34%), Positives = 31/50 (62%)
Query: 100 KELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
++L +L+ ++AT RL++L + +SL I ++L L EA D+ L+M
Sbjct: 141 QQLADLSAKPQLVVATPGRLLDLCTQSHISLDAI-KHLVLDEA-DRLLEM 188
>UNIPROTKB|Q8ECL2 [details] [associations]
symbol:SO_3125 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
Uniprot:Q8ECL2
Length = 427
Score = 108 (43.1 bits), Expect = 0.00018, P = 0.00018
Identities = 30/76 (39%), Positives = 40/76 (52%)
Query: 27 SSPAARFAY--VPQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFC 84
SS A FA + L N+ YV PTPVQ +++GRD++A A TGS KT F
Sbjct: 5 SSSVASFAELGIIAPLGNRLTELGYVSPTPVQAATIPAVLSGRDVLAGANTGSGKTAAFA 64
Query: 85 FPIINGIMREYYSARK 100
P++ + E SA K
Sbjct: 65 LPLLQRLS-EAKSADK 79
>TIGR_CMR|SO_3125 [details] [associations]
symbol:SO_3125 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
Uniprot:Q8ECL2
Length = 427
Score = 108 (43.1 bits), Expect = 0.00018, P = 0.00018
Identities = 30/76 (39%), Positives = 40/76 (52%)
Query: 27 SSPAARFAY--VPQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFC 84
SS A FA + L N+ YV PTPVQ +++GRD++A A TGS KT F
Sbjct: 5 SSSVASFAELGIIAPLGNRLTELGYVSPTPVQAATIPAVLSGRDVLAGANTGSGKTAAFA 64
Query: 85 FPIINGIMREYYSARK 100
P++ + E SA K
Sbjct: 65 LPLLQRLS-EAKSADK 79
>FB|FBgn0032919 [details] [associations]
symbol:CG9253 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
EMBL:AY121677 ProteinModelPortal:Q8MRB7 SMR:Q8MRB7 STRING:Q8MRB7
PaxDb:Q8MRB7 PRIDE:Q8MRB7 FlyBase:FBgn0032919 InParanoid:Q8MRB7
OrthoDB:EOG4V41Q7 ArrayExpress:Q8MRB7 Bgee:Q8MRB7 Uniprot:Q8MRB7
Length = 507
Score = 96 (38.9 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 48 KYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIM---REYYS-ARKELR 103
K+ P+ +QR A + + G+D++ A+TGS KT F PI++ ++ + Y++ R
Sbjct: 80 KWKAPSKIQREAIPVALQGKDVIGLAETGSGKTGAFALPILHALLENPQRYFALVLTPTR 139
Query: 104 ELA 106
ELA
Sbjct: 140 ELA 142
Score = 51 (23.0 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 17/46 (36%), Positives = 27/46 (58%)
Query: 104 ELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
+LA+ ++AT RLV+ LE + I+YL + EA D+ L+M
Sbjct: 175 QLAKKPHIIIATPGRLVDHLENMKGFNLKAIKYLVMDEA-DRILNM 219
>RGD|621743 [details] [associations]
symbol:Ddx52 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 52"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=TAS]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:621743
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
CTD:11056 GeneTree:ENSGT00550000074863 HOGENOM:HOG000242486
HOVERGEN:HBG051332 KO:K14779 OMA:NVMKQSG OrthoDB:EOG4XKV6Q
EMBL:AB055628 IPI:IPI00201365 RefSeq:NP_445977.1 UniGene:Rn.18605
ProteinModelPortal:Q99PT0 SMR:Q99PT0 PRIDE:Q99PT0
Ensembl:ENSRNOT00000003600 GeneID:85432 KEGG:rno:85432
InParanoid:Q99PT0 NextBio:617542 Genevestigator:Q99PT0
GermOnline:ENSRNOG00000002612 Uniprot:Q99PT0
Length = 598
Score = 106 (42.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 25/69 (36%), Positives = 36/69 (52%)
Query: 26 LSSPAARFAYVPQHLRNKPRTYKYVK------PTPVQRHATSILVAGRDLMACAQTGSRK 79
L P A F + Q + PR + + PTP+Q A +++ GR+L+A A TGS K
Sbjct: 157 LPDPIATFQQLDQEYKISPRLLQNILDAGFQVPTPIQMQAIPVMLHGRELLASAPTGSGK 216
Query: 80 TTPFCFPII 88
T F PI+
Sbjct: 217 TLAFSIPIL 225
Score = 36 (17.7 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 13/56 (23%), Positives = 30/56 (53%)
Query: 88 INGIMREYYSARKELRELARWVDNLMATLRRLVNLLERGRVSLQMI-IRYLALKEA 142
I+ I + +A+K + ++ D L+ T RL+ LL++ + + + +L + E+
Sbjct: 266 IHMIHKAAIAAKKFGPKSSKKFDILVTTPNRLIYLLKQEPPGIDLTSVEWLVVDES 321
>FB|FBgn0029979 [details] [associations]
symbol:CG10777 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014298
GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:AY060404
RefSeq:NP_572424.1 UniGene:Dm.101 SMR:Q9W3M7 DIP:DIP-18838N
MINT:MINT-850836 EnsemblMetazoa:FBtr0071132 GeneID:31707
KEGG:dme:Dmel_CG10777 UCSC:CG10777-RB FlyBase:FBgn0029979
InParanoid:Q9W3M7 OMA:FLENRNT OrthoDB:EOG4B8GV9 GenomeRNAi:31707
NextBio:774939 Uniprot:Q9W3M7
Length = 945
Score = 110 (43.8 bits), Expect = 0.00019, P = 0.00019
Identities = 25/69 (36%), Positives = 36/69 (52%)
Query: 22 STNTLSSPAARF--AYVPQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRK 79
S N L P F + +P H+ + + + KPT +Q I ++GRDL+ AQTGS K
Sbjct: 228 SGNELPHPVVSFEESSLPAHVIEEMKRQGFTKPTAIQSQGWPIALSGRDLVGIAQTGSGK 287
Query: 80 TTPFCFPII 88
T + P I
Sbjct: 288 TLAYMLPAI 296
>UNIPROTKB|Q48PB7 [details] [associations]
symbol:PSPPH_0449 "ATP-dependent RNA helicase RhlE,
putative" species:264730 "Pseudomonas syringae pv. phaseolicola
1448A" [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=ISS] [GO:0008026 "ATP-dependent helicase
activity" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:CP000058 GenomeReviews:CP000058_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
RefSeq:YP_272752.1 ProteinModelPortal:Q48PB7 GeneID:3558820
KEGG:psp:PSPPH_0449 PATRIC:19969930 OMA:DGDLMGF
ProtClustDB:CLSK865855 Uniprot:Q48PB7
Length = 625
Score = 109 (43.4 bits), Expect = 0.00021, P = 0.00021
Identities = 21/40 (52%), Positives = 27/40 (67%)
Query: 49 YVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPII 88
Y +PTPVQ+ A ++ GRDLM AQTG+ KT F PI+
Sbjct: 21 YTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPIL 60
>ZFIN|ZDB-GENE-030131-667 [details] [associations]
symbol:ddx46 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 46" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IMP] [GO:0031017 "exocrine
pancreas development" evidence=IMP] [GO:0007420 "brain development"
evidence=IMP] [GO:0048546 "digestive tract morphogenesis"
evidence=IMP] [GO:0072576 "liver morphogenesis" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-667
GO:GO:0005524 GO:GO:0007420 GO:GO:0003676 GO:GO:0000398
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0048546
GO:GO:0008026 GO:GO:0031017 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF GO:GO:0072576
EMBL:CU302316 IPI:IPI00865887 Ensembl:ENSDART00000099265
ArrayExpress:F1RA00 Bgee:F1RA00 Uniprot:F1RA00
Length = 1035
Score = 110 (43.8 bits), Expect = 0.00022, P = 0.00022
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 42 NKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIM 92
N + + Y KPTP+Q A +++GRDL+ A+TGS KT F P+ I+
Sbjct: 370 NALKKHNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIL 420
>UNIPROTKB|Q9KLE2 [details] [associations]
symbol:VC_A0804 "ATP-dependent RNA helicase DeaD"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0016070 "RNA metabolic
process" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0000910 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:ILFMTPR PIR:C82415 RefSeq:NP_233190.1
ProteinModelPortal:Q9KLE2 DNASU:2612819 GeneID:2612819
KEGG:vch:VCA0804 PATRIC:20086156 ProtClustDB:CLSK789062
Uniprot:Q9KLE2
Length = 663
Score = 109 (43.4 bits), Expect = 0.00022, P = 0.00022
Identities = 34/103 (33%), Positives = 52/103 (50%)
Query: 49 YVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYYSAR-------KE 101
+V PTP+Q A +L+ GRD + AQTG+ KT F P++N + Y + +E
Sbjct: 46 FVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNKLNLSQYKPQAIVMAPTRE 105
Query: 102 LR-ELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAA 143
L ++A + NL ++ L L G S+ +R ALK A
Sbjct: 106 LAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMR--ALKSGA 146
>TIGR_CMR|VC_A0804 [details] [associations]
symbol:VC_A0804 "ATP-dependent RNA helicase DeaD"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0016070 "RNA metabolic process"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0000910 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:ILFMTPR PIR:C82415 RefSeq:NP_233190.1
ProteinModelPortal:Q9KLE2 DNASU:2612819 GeneID:2612819
KEGG:vch:VCA0804 PATRIC:20086156 ProtClustDB:CLSK789062
Uniprot:Q9KLE2
Length = 663
Score = 109 (43.4 bits), Expect = 0.00022, P = 0.00022
Identities = 34/103 (33%), Positives = 52/103 (50%)
Query: 49 YVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYYSAR-------KE 101
+V PTP+Q A +L+ GRD + AQTG+ KT F P++N + Y + +E
Sbjct: 46 FVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNKLNLSQYKPQAIVMAPTRE 105
Query: 102 LR-ELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAA 143
L ++A + NL ++ L L G S+ +R ALK A
Sbjct: 106 LAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMR--ALKSGA 146
>TIGR_CMR|CPS_3401 [details] [associations]
symbol:CPS_3401 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_270076.1 ProteinModelPortal:Q47YP4
STRING:Q47YP4 GeneID:3521057 KEGG:cps:CPS_3401 PATRIC:21469753
OMA:HLIKEHQ ProtClustDB:CLSK907013
BioCyc:CPSY167879:GI48-3430-MONOMER Uniprot:Q47YP4
Length = 432
Score = 107 (42.7 bits), Expect = 0.00026, P = 0.00026
Identities = 22/53 (41%), Positives = 31/53 (58%)
Query: 48 KYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYYSARK 100
+Y +PTP+Q A + AGRDL+A A TGS KT F P++ + + S K
Sbjct: 27 EYHQPTPIQARAIPSVFAGRDLIAGANTGSGKTATFALPMLQKLREDISSGSK 79
>UNIPROTKB|E1BXX5 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
CTD:83479 OMA:VTRPIID EMBL:AADN02033796 IPI:IPI00587299
RefSeq:XP_422189.2 ProteinModelPortal:E1BXX5
Ensembl:ENSGALT00000003389 GeneID:424346 KEGG:gga:424346
NextBio:20826688 Uniprot:E1BXX5
Length = 625
Score = 108 (43.1 bits), Expect = 0.00030, P = 0.00030
Identities = 33/102 (32%), Positives = 49/102 (48%)
Query: 37 PQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYY 96
P+ L + + Y PTP+Q + + GRD++A A TGS KT F P+I ++ E
Sbjct: 217 PETLNSNLKNSGYEVPTPIQMQMIPVGLLGRDIVASADTGSGKTAAFLLPVIMKVLNETE 276
Query: 97 SARKEL----RELA----RWVDNLMATLRRLVNLLERGRVSL 130
+ + RELA R LMA L + +L G + L
Sbjct: 277 TPSALILAPTRELAIQIERQAKELMAGLPNMRTVLLVGGLPL 318
>TIGR_CMR|SO_1383 [details] [associations]
symbol:SO_1383 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_717003.1
ProteinModelPortal:Q8EH47 GeneID:1169204 KEGG:son:SO_1383
PATRIC:23522420 OMA:SEVVHGE ProtClustDB:CLSK906234 Uniprot:Q8EH47
Length = 433
Score = 99 (39.9 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 22/56 (39%), Positives = 33/56 (58%)
Query: 33 FAYVPQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPII 88
F++ P+ LR Y K TP+Q+ A + G+D++A AQTG+ KT F PI+
Sbjct: 6 FSFCPEILR-AISDCGYQKMTPIQQQAIPAIRRGQDVLASAQTGTGKTAAFALPIL 60
Score = 42 (19.8 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 117 RRLVNLLER--GRVSLQMIIRYLALKEAADQTLDMALN 152
RR LL G+ + Q ++ + A ++AAD TL LN
Sbjct: 229 RRKRELLSELIGKKNWQQVLVFTATRDAAD-TLVKELN 265
>UNIPROTKB|Q9Y6V7 [details] [associations]
symbol:DDX49 "Probable ATP-dependent RNA helicase DDX49"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC002985 KO:K14778 HOGENOM:HOG000268802 OMA:EVRTVEQ
HOVERGEN:HBG100512 EMBL:AK223294 EMBL:BC002674 IPI:IPI00003739
RefSeq:NP_061943.2 UniGene:Hs.143187 ProteinModelPortal:Q9Y6V7
SMR:Q9Y6V7 IntAct:Q9Y6V7 STRING:Q9Y6V7 PhosphoSite:Q9Y6V7
DMDM:74753527 PaxDb:Q9Y6V7 PRIDE:Q9Y6V7 DNASU:54555
Ensembl:ENST00000247003 GeneID:54555 KEGG:hsa:54555 UCSC:uc002nkq.2
CTD:54555 GeneCards:GC19P019030 HGNC:HGNC:18684 neXtProt:NX_Q9Y6V7
PharmGKB:PA134956171 InParanoid:Q9Y6V7 OrthoDB:EOG4C87SC
PhylomeDB:Q9Y6V7 GenomeRNAi:54555 NextBio:57032 ArrayExpress:Q9Y6V7
Bgee:Q9Y6V7 CleanEx:HS_DDX49 Genevestigator:Q9Y6V7
GermOnline:ENSG00000105671 Uniprot:Q9Y6V7
Length = 483
Score = 101 (40.6 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 51 KPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYY 96
+PTPVQ ++ GRD + CA+TGS KT F PI+ + + Y
Sbjct: 24 QPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQKLSEDPY 69
Score = 40 (19.1 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 15/45 (33%), Positives = 23/45 (51%)
Query: 104 ELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLD 148
EL+R ++AT RL + L IR+L + EA D+ L+
Sbjct: 116 ELSRKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEA-DRLLE 159
>UNIPROTKB|F1S7D9 [details] [associations]
symbol:DDX49 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K14778 OMA:EVRTVEQ
GeneTree:ENSGT00670000098028 CTD:54555 EMBL:CU640483
RefSeq:XP_003123587.1 UniGene:Ssc.79767 Ensembl:ENSSSCT00000025399
GeneID:100526038 KEGG:ssc:100526038 Uniprot:F1S7D9
Length = 483
Score = 101 (40.6 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 51 KPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYY 96
+PTPVQ ++ GRD + CA+TGS KT F PI+ + + Y
Sbjct: 24 QPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQKLSEDPY 69
Score = 40 (19.1 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 15/45 (33%), Positives = 23/45 (51%)
Query: 104 ELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLD 148
EL+R ++AT RL + L IR+L + EA D+ L+
Sbjct: 116 ELSRKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEA-DRLLE 159
>UNIPROTKB|E2RBM7 [details] [associations]
symbol:DDX49 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 KO:K14778
OMA:EVRTVEQ GeneTree:ENSGT00670000098028 CTD:54555
EMBL:AAEX03012274 RefSeq:XP_541930.1 ProteinModelPortal:E2RBM7
Ensembl:ENSCAFT00000023054 GeneID:484814 KEGG:cfa:484814
NextBio:20858886 Uniprot:E2RBM7
Length = 488
Score = 101 (40.6 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 51 KPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYY 96
+PTPVQ ++ GRD + CA+TGS KT F PI+ + + Y
Sbjct: 24 QPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQKLSEDPY 69
Score = 40 (19.1 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 15/45 (33%), Positives = 23/45 (51%)
Query: 104 ELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLD 148
EL+R ++AT RL + L IR+L + EA D+ L+
Sbjct: 116 ELSRKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEA-DRLLE 159
>DICTYBASE|DDB_G0293064 [details] [associations]
symbol:DDB_G0293064 species:44689 "Dictyostelium
discoideum" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0293064 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AAFI02000199
RefSeq:XP_629301.1 ProteinModelPortal:Q54CB8
EnsemblProtists:DDB0191757 GeneID:8629024 KEGG:ddi:DDB_G0293064
InParanoid:Q54CB8 OMA:VLYWSAT Uniprot:Q54CB8
Length = 573
Score = 107 (42.7 bits), Expect = 0.00039, P = 0.00039
Identities = 30/84 (35%), Positives = 42/84 (50%)
Query: 48 KYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMRE----YYSARKEL- 102
K+ KPTPVQ I ++G D++ ++TGS KT F P I I+ + YY L
Sbjct: 158 KFEKPTPVQSLGWPIALSGSDMLGISKTGSGKTLSFILPAIEHILAQPRQSYYPGPSVLV 217
Query: 103 ----RELARWVDNLMATLRRLVNL 122
RELA ++ RLVN+
Sbjct: 218 VAPTRELANQINQEAEQYLRLVNI 241
>ASPGD|ASPL0000000390 [details] [associations]
symbol:AN6374 species:162425 "Emericella nidulans"
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IEA] [GO:0033680 "ATP-dependent DNA/RNA
helicase activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 EMBL:AACD01000107 EMBL:BN001301 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14810
RefSeq:XP_663978.1 ProteinModelPortal:Q5AZA6 STRING:Q5AZA6
EnsemblFungi:CADANIAT00006610 GeneID:2871271 KEGG:ani:AN6374.2
HOGENOM:HOG000253015 OMA:TFLMSAT OrthoDB:EOG4DFSWQ Uniprot:Q5AZA6
Length = 610
Score = 107 (42.7 bits), Expect = 0.00042, P = 0.00042
Identities = 20/47 (42%), Positives = 32/47 (68%)
Query: 48 KYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMRE 94
K+ KPTPVQ A + + G+D++A A+TGS KT + PI+ I+++
Sbjct: 47 KFSKPTPVQAKAIPLALEGKDILARAKTGSGKTAAYVLPILQTILQK 93
>DICTYBASE|DDB_G0292992 [details] [associations]
symbol:helA "putative RNA helicase" species:44689
"Dictyostelium discoideum" [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271
Pfam:PF08147 ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0292992 GO:GO:0005524
GenomeReviews:CM000155_GR GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AAFI02000199 KO:K14808 HSSP:P10081 EMBL:X81822
RefSeq:XP_629281.1 ProteinModelPortal:Q54CD8 STRING:Q54CD8
EnsemblProtists:DDB0215372 GeneID:8629004 KEGG:ddi:DDB_G0292992
OMA:RLPKDGH ProtClustDB:CLSZ2429315 Uniprot:Q54CD8
Length = 1091
Score = 88 (36.0 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 16/37 (43%), Positives = 25/37 (67%)
Query: 52 PTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPII 88
PTP+QR + +++ G D++ A+TGS KT F P+I
Sbjct: 253 PTPIQRKSIPMILDGHDIVGMARTGSGKTGAFVIPMI 289
Score = 66 (28.3 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 97 SARKELRELARWVDNLMATLRRLVN-LLERGRVSLQMIIRYLALKEAADQTLDMALNQK 154
S + +LAR D ++AT RL++ LLE G +SL + +Y+ EA D+ +M N++
Sbjct: 339 SMEDQFTDLARNPDIIIATPGRLMHHLLETG-MSLSKV-QYIVFDEA-DRLFEMGFNEQ 394
>DICTYBASE|DDB_G0282741 [details] [associations]
symbol:ddx18 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0282741 GO:GO:0005524
GO:GO:0005730 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 InterPro:IPR025313 Pfam:PF13959
RefSeq:XP_640236.1 ProteinModelPortal:Q54S03 STRING:Q54S03
EnsemblProtists:DDB0234194 GeneID:8623775 KEGG:ddi:DDB_G0282741
KO:K13179 OMA:KDGYRSY Uniprot:Q54S03
Length = 602
Score = 95 (38.5 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 23/87 (26%), Positives = 41/87 (47%)
Query: 15 NAAPASSSTNTLSSPAARFAYVP--QHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMAC 72
N S +S + F+ +P ++ + + K TP+Q + L+ G+DL+
Sbjct: 103 NTGNVSEKELGISKESIEFSNLPIEENTKKSIEEMGFKKMTPIQAKSILPLLEGKDLLGA 162
Query: 73 AQTGSRKTTPFCFPIINGIMREYYSAR 99
A+TGS KT F P I +++ + R
Sbjct: 163 ARTGSGKTLAFLIPAIEVLVKSNFKPR 189
Score = 50 (22.7 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 17/66 (25%), Positives = 36/66 (54%)
Query: 89 NGIMREYYSARKELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLD 148
+GI+ S + E L + V+ L+AT RL++ L+ + + ++ L + EA D+ L+
Sbjct: 222 HGIVIGGASKKPEEERLEKGVNLLVATPGRLLDHLQNTKGFITKNLKCLIIDEA-DRILE 280
Query: 149 MALNQK 154
+ ++
Sbjct: 281 VGFEEE 286
>UNIPROTKB|P0A9P6 [details] [associations]
symbol:deaD "DeaD, DEAD-box RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0030684 "preribosome" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0006401 "RNA catabolic
process" evidence=IGI] [GO:0003724 "RNA helicase activity"
evidence=IDA] [GO:0070417 "cellular response to cold"
evidence=IEP;IMP] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR021046 Pfam:PF00270 Pfam:PF00271 Pfam:PF12343
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR EMBL:U18997 GO:GO:0003723 GO:GO:0006401
GO:GO:0070417 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 EMBL:M63288 EMBL:U03750 PIR:F65106 RefSeq:NP_417631.2
RefSeq:YP_491349.1 ProteinModelPortal:P0A9P6 SMR:P0A9P6
DIP:DIP-35752N IntAct:P0A9P6 MINT:MINT-1219396 SWISS-2DPAGE:P0A9P6
PaxDb:P0A9P6 PRIDE:P0A9P6 EnsemblBacteria:EBESCT00000000679
EnsemblBacteria:EBESCT00000014242 GeneID:12933435 GeneID:947674
KEGG:ecj:Y75_p3084 KEGG:eco:b3162 PATRIC:32121742 EchoBASE:EB0211
EcoGene:EG10215 OMA:ILFMTPR ProtClustDB:PRK11634
BioCyc:EcoCyc:EG10215-MONOMER BioCyc:ECOL316407:JW5531-MONOMER
Genevestigator:P0A9P6 GO:GO:0030684 Uniprot:P0A9P6
Length = 629
Score = 98 (39.6 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 49 YVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGI 91
Y KP+P+Q L+ GRD++ AQTGS KT F P++ +
Sbjct: 26 YEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQNL 68
Score = 46 (21.3 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 101 ELRELARWVDNLMATLRRLVNLLERGRVSLQMIIRYLALKEAADQTLDM 149
+LR L + ++ T RL++ L+RG + L + L L EA D+ L M
Sbjct: 118 QLRALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSG-LVLDEA-DEMLRM 164
>DICTYBASE|DDB_G0291804 [details] [associations]
symbol:ddx6 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0291804 GO:GO:0005524 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006397 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 KO:K12614 InterPro:IPR014014 PROSITE:PS51195
EMBL:AAFI02000185 RefSeq:XP_629938.1 HSSP:P39517
ProteinModelPortal:Q54E49 SMR:Q54E49 PRIDE:Q54E49
EnsemblProtists:DDB0234196 GeneID:8628344 KEGG:ddi:DDB_G0291804
OMA:QFMEKHL ProtClustDB:CLSZ2429504 Uniprot:Q54E49
Length = 423
Score = 105 (42.0 bits), Expect = 0.00056, P = 0.00056
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 49 YVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPII 88
YVKP+P+Q A I +AGRD+MA A+ G+ KT F P +
Sbjct: 69 YVKPSPIQEKAIPIALAGRDIMARAKNGTGKTASFLIPAL 108
>DICTYBASE|DDB_G0281711 [details] [associations]
symbol:ddx27 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0281711 GO:GO:0005524 GO:GO:0005634
GenomeReviews:CM000152_GR GO:GO:0042254 GO:GO:0003723
EMBL:AAFI02000042 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K13181 RefSeq:XP_640597.1 HSSP:Q5STU4 ProteinModelPortal:Q54TJ4
STRING:Q54TJ4 EnsemblProtists:DDB0234201 GeneID:8623207
KEGG:ddi:DDB_G0281711 OMA:SEYRAIR Uniprot:Q54TJ4
Length = 783
Score = 107 (42.7 bits), Expect = 0.00058, P = 0.00058
Identities = 26/81 (32%), Positives = 44/81 (54%)
Query: 49 YVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIM---REYYSARKEL--- 102
+ +PTP+Q A + + G+D++A A TGS KT F P++ ++ EY + R +
Sbjct: 210 FSQPTPIQAKAIPLALNGKDILASASTGSGKTAAFLLPVLERLLFRDSEYRAIRVLILLP 269
Query: 103 -RELARWVDNLMATLRRLVNL 122
RELA ++M L + N+
Sbjct: 270 TRELALQCQSVMENLAQFSNI 290
>FB|FBgn0036104 [details] [associations]
symbol:CG6418 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE014296 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 KO:K12835 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AY061400 RefSeq:NP_648413.1
UniGene:Dm.922 SMR:Q9VTC1 IntAct:Q9VTC1 MINT:MINT-311970
STRING:Q9VTC1 EnsemblMetazoa:FBtr0076274 GeneID:39218
KEGG:dme:Dmel_CG6418 UCSC:CG6418-RB FlyBase:FBgn0036104
InParanoid:Q9VTC1 OrthoDB:EOG4KKWJ0 ChiTaRS:CG6418 GenomeRNAi:39218
NextBio:812543 Uniprot:Q9VTC1
Length = 791
Score = 107 (42.7 bits), Expect = 0.00059, P = 0.00059
Identities = 22/66 (33%), Positives = 36/66 (54%)
Query: 29 PAARFAYV--PQHLRNKPRTYKYVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFP 86
P F + + L R +Y +PTP+Q A ++GRD++ A+TGS KT F +P
Sbjct: 267 PVTSFGHFGFDEQLIKAVRKAEYTQPTPIQAQAVPTALSGRDIIGIAKTGSGKTAAFIWP 326
Query: 87 IINGIM 92
++ +M
Sbjct: 327 MLMHVM 332
>ZFIN|ZDB-GENE-060623-1 [details] [associations]
symbol:ddx52 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
52" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-060623-1
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 CTD:11056 HOVERGEN:HBG051332 KO:K14779
OrthoDB:EOG4XKV6Q EMBL:BC117610 IPI:IPI00627696
RefSeq:NP_001037780.1 UniGene:Dr.13799 ProteinModelPortal:Q1ECZ5
STRING:Q1ECZ5 GeneID:407696 KEGG:dre:407696 NextBio:20818558
Uniprot:Q1ECZ5
Length = 606
Score = 104 (41.7 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 52 PTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPII 88
PTP+Q A +++ R+++ACA TGS KT FC P++
Sbjct: 190 PTPIQMQAVPLMMHKREILACAPTGSGKTMAFCLPLL 226
Score = 35 (17.4 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 10/38 (26%), Positives = 21/38 (55%)
Query: 106 ARWVDNLMATLRRLVNLLERGRVSLQMI-IRYLALKEA 142
A+ D L+ T RL+ LL + ++ + + +L + E+
Sbjct: 285 AKKFDILVTTPNRLIYLLNQDPPAINLSSVEWLVVDES 322
>ASPGD|ASPL0000071661 [details] [associations]
symbol:AN9445 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR011545
Pfam:PF00270 GO:GO:0005524 GO:GO:0003676 EMBL:BN001303
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 ProteinModelPortal:C8VAA2
EnsemblFungi:CADANIAT00005592 Uniprot:C8VAA2
Length = 217
Score = 101 (40.6 bits), Expect = 0.00063, P = 0.00063
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 49 YVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIM 92
Y PTP+Q +A ++ DL+A AQTGS KT F P+++ +M
Sbjct: 161 YEFPTPIQAYAIPAVLTSHDLIAIAQTGSGKTAAFLIPVLSQLM 204
>UNIPROTKB|Q8EBV7 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 104 (41.7 bits), Expect = 0.00079, P = 0.00079
Identities = 24/59 (40%), Positives = 35/59 (59%)
Query: 49 YVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYYS--ARKELREL 105
Y +PTP+Q A ++ +D+MA AQTG+ KT F PI+ +M + S A K +R L
Sbjct: 21 YQQPTPIQVEAIPAILTKQDVMAGAQTGTGKTAAFALPILQLLMADNQSDHAAKAIRAL 79
>TIGR_CMR|SO_3388 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 104 (41.7 bits), Expect = 0.00079, P = 0.00079
Identities = 24/59 (40%), Positives = 35/59 (59%)
Query: 49 YVKPTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPIINGIMREYYS--ARKELREL 105
Y +PTP+Q A ++ +D+MA AQTG+ KT F PI+ +M + S A K +R L
Sbjct: 21 YQQPTPIQVEAIPAILTKQDVMAGAQTGTGKTAAFALPILQLLMADNQSDHAAKAIRAL 79
>POMBASE|SPAC823.08c [details] [associations]
symbol:SPAC823.08c "ATP-dependent RNA helicase Rrp3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006364 "rRNA
processing" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 PomBase:SPAC823.08c GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
OrthoDB:EOG4ZPJ3P RefSeq:NP_593835.1 ProteinModelPortal:Q9P6N8
SMR:Q9P6N8 STRING:Q9P6N8 EnsemblFungi:SPAC823.08c.1 GeneID:2543571
KEGG:spo:SPAC823.08c NextBio:20804578 Uniprot:Q9P6N8
Length = 465
Score = 94 (38.1 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 52 PTPVQRHATSILVAGRDLMACAQTGSRKTTPFCFPII 88
PTP+Q+ A +++ RD++ AQTGS KT F P+I
Sbjct: 69 PTPIQQEAIPVVLNKRDVIGLAQTGSGKTAAFALPVI 105
Score = 46 (21.3 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 112 LMATLRRLVNLLERGR-VSLQMIIRYLALKEAADQTLDM 149
L+ T RL++ LE + SL+ + +YL + EA D+ LDM
Sbjct: 168 LVCTPGRLMDHLENTKGFSLKNL-KYLIMDEA-DRLLDM 204
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.128 0.371 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 155 155 0.00096 105 3 11 22 0.44 31
30 0.41 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 189
No. of states in DFA: 580 (62 KB)
Total size of DFA: 135 KB (2084 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.82u 0.09s 16.91t Elapsed: 00:00:01
Total cpu time: 16.83u 0.10s 16.93t Elapsed: 00:00:01
Start: Mon May 20 23:13:23 2013 End: Mon May 20 23:13:24 2013
WARNINGS ISSUED: 1