Query         031662
Match_columns 155
No_of_seqs    153 out of 2164
Neff          11.2
Searched_HMMs 46136
Date          Fri Mar 29 03:39:13 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031662.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/031662hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG4412 26S proteasome regulat 100.0 9.5E-34 2.1E-38  172.9  11.5  139   13-151    63-202 (226)
  2 KOG4412 26S proteasome regulat 100.0 4.1E-33 8.9E-38  170.2   7.7  132   20-151    36-169 (226)
  3 PHA02791 ankyrin-like protein; 100.0 1.3E-29 2.9E-34  170.6  14.8  138   13-152    85-225 (284)
  4 KOG0509 Ankyrin repeat and DHH 100.0 1.9E-29   4E-34  178.6  12.9  140   12-151    68-208 (600)
  5 PHA02875 ankyrin repeat protei 100.0   2E-28 4.3E-33  174.2  15.8  131   19-149    99-230 (413)
  6 PHA02791 ankyrin-like protein; 100.0 1.8E-28 3.8E-33  165.2  14.7  128   22-151    61-190 (284)
  7 PHA02743 Viral ankyrin protein 100.0 3.5E-28 7.5E-33  153.0  13.7  141   13-153    11-160 (166)
  8 PHA02875 ankyrin repeat protei 100.0 5.3E-28 1.1E-32  172.0  15.5  132   20-151    66-198 (413)
  9 KOG0509 Ankyrin repeat and DHH 100.0   4E-29 8.6E-34  177.0   9.5  144    2-152    99-243 (600)
 10 PHA02859 ankyrin repeat protei 100.0 8.9E-28 1.9E-32  156.3  15.0  137   16-152    45-190 (209)
 11 PHA02878 ankyrin repeat protei 100.0 5.2E-28 1.1E-32  174.7  15.1  141   10-152   155-298 (477)
 12 PHA02874 ankyrin repeat protei 100.0 2.8E-27 6.1E-32  169.2  16.1  142   11-152   113-286 (434)
 13 PHA02874 ankyrin repeat protei 100.0 2.4E-27 5.1E-32  169.5  15.7  133   17-149    63-218 (434)
 14 PHA02878 ankyrin repeat protei 100.0 2.2E-27 4.7E-32  171.5  15.3  115   37-151   149-265 (477)
 15 PHA03100 ankyrin repeat protei 100.0 2.1E-27 4.6E-32  171.7  14.9  139   13-151   132-280 (480)
 16 PHA02741 hypothetical protein; 100.0 6.6E-27 1.4E-31  147.7  14.4  132   16-147    15-158 (169)
 17 PHA03100 ankyrin repeat protei  99.9 1.1E-26 2.4E-31  168.0  14.9  141   11-151    57-206 (480)
 18 PHA02716 CPXV016; CPX019; EVM0  99.9 7.9E-27 1.7E-31  172.9  14.1  142   10-151   200-396 (764)
 19 PLN03192 Voltage-dependent pot  99.9 9.3E-27   2E-31  176.9  14.7  137   13-151   549-685 (823)
 20 KOG0508 Ankyrin repeat protein  99.9 2.4E-27 5.2E-32  163.4  10.0  135   18-152    80-214 (615)
 21 PHA02946 ankyin-like protein;   99.9 1.8E-26 3.9E-31  164.8  14.5  141    9-150    59-204 (446)
 22 PHA03095 ankyrin-like protein;  99.9 5.4E-26 1.2E-30  164.1  15.3  141   10-150    35-183 (471)
 23 PHA02716 CPXV016; CPX019; EVM0  99.9   4E-26 8.7E-31  169.2  14.5  140   13-152   167-350 (764)
 24 KOG0508 Ankyrin repeat protein  99.9   7E-27 1.5E-31  161.1   9.2  133    9-142   104-236 (615)
 25 PHA02736 Viral ankyrin protein  99.9 2.6E-26 5.5E-31  143.1  10.7  134   16-149    11-154 (154)
 26 PHA02859 ankyrin repeat protei  99.9 1.2E-25 2.6E-30  146.3  14.0  131   19-152    18-156 (209)
 27 PHA02795 ankyrin-like protein;  99.9 6.1E-26 1.3E-30  158.9  13.2  127   23-149   150-290 (437)
 28 PHA03095 ankyrin-like protein;  99.9 1.9E-25 4.1E-30  161.2  14.6  135   14-148   179-317 (471)
 29 PHA02798 ankyrin-like protein;  99.9 2.3E-25 5.1E-30  161.3  14.8  140   12-151    99-288 (489)
 30 KOG0510 Ankyrin repeat protein  99.9   7E-26 1.5E-30  164.4  11.4  136   15-150   266-406 (929)
 31 PHA02989 ankyrin repeat protei  99.9   3E-25 6.6E-30  160.9  14.4  142   10-151    96-286 (494)
 32 PHA02884 ankyrin repeat protei  99.9 5.5E-25 1.2E-29  148.6  14.3  114   23-136    34-152 (300)
 33 KOG0502 Integral membrane anky  99.9 1.2E-25 2.6E-30  141.7   9.5  138   13-151   151-288 (296)
 34 PHA02876 ankyrin repeat protei  99.9 6.6E-25 1.4E-29  164.5  14.9  140   13-152   332-474 (682)
 35 PHA02989 ankyrin repeat protei  99.9 9.7E-25 2.1E-29  158.3  14.1  138   10-147   132-315 (494)
 36 PHA02798 ankyrin-like protein;  99.9 9.3E-25   2E-29  158.2  13.7  140   10-149    59-214 (489)
 37 PHA02946 ankyin-like protein;   99.9 2.8E-24 6.1E-29  153.6  14.0  138   11-150    94-238 (446)
 38 PHA02795 ankyrin-like protein;  99.9 4.7E-24   1E-28  149.5  14.2  133   18-152   112-252 (437)
 39 PHA02876 ankyrin repeat protei  99.9 5.6E-24 1.2E-28  159.5  15.3  137   13-149   264-403 (682)
 40 PHA02917 ankyrin-like protein;  99.9   1E-23 2.2E-28  156.2  14.5  141   11-151    21-226 (661)
 41 KOG4177 Ankyrin [Cell wall/mem  99.9 2.5E-24 5.3E-29  163.3  11.0  131   16-146   501-631 (1143)
 42 KOG0510 Ankyrin repeat protein  99.9   9E-24   2E-28  153.6  11.4  138   11-148   214-368 (929)
 43 KOG4177 Ankyrin [Cell wall/mem  99.9 4.3E-24 9.3E-29  162.0   9.8  150    4-153   456-605 (1143)
 44 KOG0502 Integral membrane anky  99.9 4.6E-24   1E-28  134.6   8.0  138   12-151   119-256 (296)
 45 PHA02917 ankyrin-like protein;  99.9 3.6E-23 7.8E-28  153.4  13.8  124   24-148   105-257 (661)
 46 PHA02730 ankyrin-like protein;  99.9 3.7E-23 7.9E-28  151.3  13.5  138   11-149   368-526 (672)
 47 PLN03192 Voltage-dependent pot  99.9 8.4E-23 1.8E-27  155.5  15.5  132   19-152   522-653 (823)
 48 PF12796 Ank_2:  Ankyrin repeat  99.9   1E-22 2.2E-27  115.7  11.5   88   26-117     1-88  (89)
 49 PF12796 Ank_2:  Ankyrin repeat  99.9 8.6E-23 1.9E-27  116.0  10.4   89   59-151     1-89  (89)
 50 KOG0195 Integrin-linked kinase  99.9   6E-23 1.3E-27  134.6   9.6  117   13-129    25-141 (448)
 51 cd00204 ANK ankyrin repeats;    99.9 1.6E-21 3.4E-26  117.0  14.3  123   19-141     4-126 (126)
 52 KOG0505 Myosin phosphatase, re  99.9 1.3E-22 2.8E-27  141.7  10.1  145    8-152    59-262 (527)
 53 PHA02743 Viral ankyrin protein  99.9   7E-22 1.5E-26  124.4  11.2  112   11-122    46-162 (166)
 54 KOG0514 Ankyrin repeat protein  99.9 1.9E-22 4.2E-27  135.4   8.5  126   17-143   263-395 (452)
 55 KOG0512 Fetal globin-inducing   99.9 1.3E-21 2.8E-26  119.4  11.1  125   24-148    65-192 (228)
 56 PHA02730 ankyrin-like protein;  99.9 1.2E-21 2.6E-26  143.4  12.6  132   17-148    36-182 (672)
 57 KOG0512 Fetal globin-inducing   99.9 3.2E-21 6.9E-26  117.7  10.9  122   11-132    86-209 (228)
 58 KOG0507 CASK-interacting adapt  99.9 4.8E-21   1E-25  138.7   9.9  138    6-143    33-170 (854)
 59 PHA02792 ankyrin-like protein;  99.9 1.4E-20   3E-25  136.8  12.3  128   21-148   338-480 (631)
 60 PHA02884 ankyrin repeat protei  99.8 5.8E-20 1.3E-24  124.3  13.3  119   19-145    67-186 (300)
 61 PHA02741 hypothetical protein;  99.8 2.3E-20   5E-25  117.9  10.7  103   49-151    15-129 (169)
 62 TIGR00870 trp transient-recept  99.8 1.5E-20 3.3E-25  142.3  10.8  127   19-145   125-281 (743)
 63 KOG4214 Myotrophin and similar  99.8   2E-20 4.4E-25  102.7   8.1  103   25-128     5-107 (117)
 64 KOG3676 Ca2+-permeable cation   99.8   3E-20 6.6E-25  135.5  11.0  127   17-143   179-330 (782)
 65 PHA02792 ankyrin-like protein;  99.8 1.4E-19   3E-24  131.6  11.7  128   16-143    65-239 (631)
 66 KOG0195 Integrin-linked kinase  99.8 9.9E-21 2.1E-25  124.3   5.0  124   28-151     6-130 (448)
 67 PHA02736 Viral ankyrin protein  99.8 4.6E-20   1E-24  114.9   7.5   99   17-115    50-153 (154)
 68 COG0666 Arp FOG: Ankyrin repea  99.8 1.1E-18 2.4E-23  114.6  12.8  128   17-144    68-203 (235)
 69 TIGR00870 trp transient-recept  99.8 5.4E-19 1.2E-23  133.9  12.2  136   12-151    42-205 (743)
 70 KOG1710 MYND Zn-finger and ank  99.8 7.3E-19 1.6E-23  115.3  10.1  133   22-154    12-145 (396)
 71 KOG0514 Ankyrin repeat protein  99.8 1.7E-19 3.6E-24  121.5   6.6  104   48-152   261-371 (452)
 72 KOG0507 CASK-interacting adapt  99.8 1.1E-18 2.4E-23  126.6   5.9  140   11-150    71-218 (854)
 73 PTZ00322 6-phosphofructo-2-kin  99.8 1.8E-17 3.9E-22  123.8  12.5  106   24-129    84-196 (664)
 74 KOG4214 Myotrophin and similar  99.8   6E-18 1.3E-22   93.1   7.2   92   57-149     4-95  (117)
 75 cd00204 ANK ankyrin repeats;    99.7 5.8E-17 1.3E-21   97.0  11.8  101   51-151     3-103 (126)
 76 KOG0515 p53-interacting protei  99.7 6.2E-17 1.3E-21  113.9  10.0  119   25-143   553-674 (752)
 77 KOG0505 Myosin phosphatase, re  99.7   9E-17 1.9E-21  112.9  10.3  132   21-152    39-229 (527)
 78 PTZ00322 6-phosphofructo-2-kin  99.7 1.5E-16 3.3E-21  118.9  11.0   95   58-152    85-186 (664)
 79 KOG3676 Ca2+-permeable cation   99.7 1.1E-16 2.3E-21  117.3   9.3  134   13-146   134-298 (782)
 80 PF13637 Ank_4:  Ankyrin repeat  99.7 1.5E-16 3.2E-21   81.7   6.5   54   88-141     1-54  (54)
 81 PF13857 Ank_5:  Ankyrin repeat  99.7 5.8E-17 1.3E-21   83.7   4.6   55   74-128     1-56  (56)
 82 PF13637 Ank_4:  Ankyrin repeat  99.7 3.8E-16 8.3E-21   80.2   6.4   54   55-108     1-54  (54)
 83 KOG0515 p53-interacting protei  99.6 7.1E-16 1.5E-20  108.6   8.2   92   59-150   554-645 (752)
 84 PF13857 Ank_5:  Ankyrin repeat  99.6 3.8E-16 8.3E-21   80.6   4.2   55   41-95      1-56  (56)
 85 KOG4369 RTK signaling protein   99.6 4.7E-16   1E-20  117.6   3.9  131   19-149   754-885 (2131)
 86 COG0666 Arp FOG: Ankyrin repea  99.6 4.6E-14   1E-18   92.5  11.1  101   50-150    68-176 (235)
 87 KOG1710 MYND Zn-finger and ank  99.5 2.2E-14 4.7E-19   94.5   5.9  101   10-110    33-134 (396)
 88 KOG4369 RTK signaling protein   99.5 1.4E-14   3E-19  109.9   5.4  143    8-150   776-921 (2131)
 89 KOG0506 Glutaminase (contains   99.4 2.8E-12   6E-17   89.7   7.3   90   21-110   505-595 (622)
 90 KOG0782 Predicted diacylglycer  99.3 8.8E-12 1.9E-16   89.3   8.9  120   25-144   869-990 (1004)
 91 KOG0506 Glutaminase (contains   99.3 5.4E-12 1.2E-16   88.3   6.4   93   54-146   505-598 (622)
 92 KOG0818 GTPase-activating prot  99.3 5.9E-11 1.3E-15   83.6   9.7   90   58-147   136-226 (669)
 93 KOG0783 Uncharacterized conser  99.2 5.8E-12 1.3E-16   93.5   3.8   99   32-130    27-128 (1267)
 94 KOG0818 GTPase-activating prot  99.2 1.2E-10 2.5E-15   82.2   9.4   85   25-109   136-221 (669)
 95 KOG0705 GTPase-activating prot  99.2 1.7E-10 3.7E-15   82.7   8.5   90   25-114   627-720 (749)
 96 PF13606 Ank_3:  Ankyrin repeat  99.2 3.8E-11 8.2E-16   53.5   3.0   29  120-148     1-29  (30)
 97 KOG3609 Receptor-activated Ca2  99.1 6.1E-10 1.3E-14   83.0   9.7  126   19-151    22-161 (822)
 98 KOG0522 Ankyrin repeat protein  99.1 6.6E-10 1.4E-14   78.9   8.2   86   58-143    23-110 (560)
 99 PF13606 Ank_3:  Ankyrin repeat  99.1 2.4E-10 5.2E-15   50.9   3.8   28   88-115     2-29  (30)
100 KOG0705 GTPase-activating prot  99.1 8.5E-10 1.8E-14   79.2   7.4   91   59-149   628-722 (749)
101 KOG0783 Uncharacterized conser  99.0 1.6E-10 3.6E-15   86.1   3.2   82   16-97     46-128 (1267)
102 PF00023 Ank:  Ankyrin repeat H  99.0 6.9E-10 1.5E-14   50.7   4.2   28   89-116     3-30  (33)
103 PF00023 Ank:  Ankyrin repeat H  99.0 1.1E-09 2.4E-14   50.0   4.3   31   55-85      2-32  (33)
104 KOG0782 Predicted diacylglycer  98.9 4.9E-09 1.1E-13   75.6   5.8   94   17-110   894-989 (1004)
105 KOG0522 Ankyrin repeat protein  98.9 1.3E-08 2.9E-13   72.5   7.6   87   24-110    22-110 (560)
106 KOG0521 Putative GTPase activa  98.9 4.2E-09   9E-14   79.9   5.2   91   53-143   654-744 (785)
107 KOG0520 Uncharacterized conser  98.8 1.1E-08 2.3E-13   78.0   6.6  136   15-151   567-710 (975)
108 KOG0511 Ankyrin repeat protein  98.8 3.1E-08 6.7E-13   68.3   7.2   71   23-93     37-107 (516)
109 KOG2384 Major histocompatibili  98.7 8.4E-08 1.8E-12   60.2   6.8   70   45-114     2-72  (223)
110 KOG0511 Ankyrin repeat protein  98.7 1.1E-07 2.3E-12   65.7   7.1   67   58-124    39-105 (516)
111 KOG2384 Major histocompatibili  98.6   4E-07 8.7E-12   57.2   6.7   75   13-87      3-78  (223)
112 KOG0521 Putative GTPase activa  98.5 1.2E-07 2.5E-12   72.3   4.4   88   20-107   654-741 (785)
113 KOG3609 Receptor-activated Ca2  98.5 6.9E-07 1.5E-11   67.3   7.7  105   13-124    53-167 (822)
114 KOG0520 Uncharacterized conser  98.3   4E-07 8.7E-12   69.8   3.0   98   51-148   570-668 (975)
115 KOG2505 Ankyrin repeat protein  97.9 5.5E-05 1.2E-09   54.4   6.5   71   68-141   404-480 (591)
116 KOG2505 Ankyrin repeat protein  97.8 7.3E-05 1.6E-09   53.8   5.7   66   33-98    402-473 (591)
117 smart00248 ANK ankyrin repeats  97.7 7.6E-05 1.6E-09   31.8   3.1   25  121-145     2-26  (30)
118 smart00248 ANK ankyrin repeats  97.6 0.00022 4.7E-09   30.3   3.9   26   88-113     2-27  (30)
119 PF06128 Shigella_OspC:  Shigel  97.4  0.0018   4E-08   42.4   7.7  114   26-147   157-280 (284)
120 PF03158 DUF249:  Multigene fam  97.0    0.01 2.2E-07   37.7   7.8   46   91-142   146-191 (192)
121 PF06128 Shigella_OspC:  Shigel  96.4   0.041   9E-07   36.3   7.7   94   20-114   177-280 (284)
122 PF11929 DUF3447:  Domain of un  95.5   0.039 8.5E-07   30.0   4.1   47   57-110     8-54  (76)
123 PF11929 DUF3447:  Domain of un  94.7    0.13 2.8E-06   27.9   4.7   48   23-77      7-54  (76)
124 PF03158 DUF249:  Multigene fam  90.9    0.72 1.6E-05   29.6   4.5   81   23-109   105-191 (192)
125 KOG1709 Guanidinoacetate methy  55.1      15 0.00033   24.7   2.6   42   41-82      1-42  (271)
126 KOG1709 Guanidinoacetate methy  51.0      19  0.0004   24.3   2.5   39   10-48      3-41  (271)
127 PF04053 Coatomer_WDAD:  Coatom  48.2      28 0.00062   26.0   3.4  105   24-144   323-429 (443)
128 KOG3438 DNA-directed RNA polym  46.8     9.3  0.0002   22.0   0.6   21  135-155    31-51  (105)
129 PF12645 HTH_16:  Helix-turn-he  42.5      38 0.00083   17.7   2.5   19   26-44      3-21  (65)
130 KOG3836 HLH transcription fact  41.6     7.5 0.00016   29.8  -0.3   50   29-78    403-452 (605)
131 TIGR03774 RPE2 Rickettsial pal  41.0      21 0.00046   16.0   1.1   16    2-17     11-26  (35)
132 KOG3836 HLH transcription fact  32.3      12 0.00026   28.8  -0.5   43   68-110   409-451 (605)
133 PF10683 DBD_Tnp_Hermes:  Herme  27.6      13 0.00029   19.6  -0.7   24  124-147    30-53  (68)
134 PF01671 ASFV_360:  African swi  27.2 1.7E+02  0.0036   19.6   4.0   39   28-72     91-129 (215)
135 PF04840 Vps16_C:  Vps16, C-ter  24.6 1.8E+02  0.0039   20.8   4.2   51   26-76      7-63  (319)
136 PF04405 ScdA_N:  Domain of Unk  23.5 1.2E+02  0.0025   15.4   3.9   39   99-140    11-49  (56)
137 PF12514 DUF3718:  Protein of u  23.3 1.3E+02  0.0029   15.9   2.7   22  119-140    33-54  (68)
138 KOG4591 Uncharacterized conser  22.1      81  0.0017   21.0   1.9   47   85-131   219-270 (280)
139 KOG3614 Ca2+/Mg2+-permeable ca  21.1 3.4E+02  0.0073   24.0   5.4   94   58-155   566-695 (1381)
140 PF06953 ArsD:  Arsenical resis  20.6 1.2E+02  0.0026   18.3   2.3   16   70-85     32-47  (123)

No 1  
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=100.00  E-value=9.5e-34  Score=172.93  Aligned_cols=139  Identities=26%  Similarity=0.362  Sum_probs=122.8

Q ss_pred             CCccCCCcccHHHHHHHHHhCCHHHHHHHHHc-CCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCH
Q 031662           13 QTTETSSPENIDALLAAARYDDIEDVISLASA-GVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTP   91 (155)
Q Consensus        13 ~~~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~-~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~   91 (155)
                      ..++..+..||||||+|+..|+.++|+.|+.+ ++++|.....|.|+||||+..+..++.++|+++|+.++.+|..|.||
T Consensus        63 v~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~qtp  142 (226)
T KOG4412|consen   63 VKPDDKDDAGWTPLHIAASNGNDEVVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQGQTP  142 (226)
T ss_pred             CCCCCccccCCchhhhhhhcCcHHHHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCCcccccccCch
Confidence            34455678899999999999999999999988 88999888899999999999999999999999999999999999999


Q ss_pred             HHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccCC
Q 031662           92 LHYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELGG  151 (155)
Q Consensus        92 l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~  151 (155)
                      ||-|+.-|..+++++|+..|+.+|..|..|+||||.|.-.|+.++..+|+++|+++++.+
T Consensus       143 lHRAAavGklkvie~Li~~~a~~n~qDk~G~TpL~~al~e~~~d~a~lLV~~gAd~~~ed  202 (226)
T KOG4412|consen  143 LHRAAAVGKLKVIEYLISQGAPLNTQDKYGFTPLHHALAEGHPDVAVLLVRAGADTDRED  202 (226)
T ss_pred             hHHHHhccchhhHHHHHhcCCCCCcccccCccHHHHHHhccCchHHHHHHHhccceeecc
Confidence            999999999999999999999999999999999999988889999999999998887655


No 2  
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=100.00  E-value=4.1e-33  Score=170.17  Aligned_cols=132  Identities=34%  Similarity=0.478  Sum_probs=125.9

Q ss_pred             cccHHHHHHHHHhCCHHHHHHHHH-cCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhc-CCCCCCCCCCCCCHHHHHHh
Q 031662           20 PENIDALLAAARYDDIEDVISLAS-AGVPLDSKDSQGRTALHMASANGHLGIVEYLIGR-GVDINASNEEKNTPLHYACL   97 (155)
Q Consensus        20 ~~~~~~l~~A~~~~~~~~v~~ll~-~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~t~l~~a~~   97 (155)
                      .++.+|||+||..|+.+++.+|++ .+..+|.+|..||||||.|+..|+.++++-|+.+ |+++|..+..|.|+||+|+-
T Consensus        36 qD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~advna~tn~G~T~LHyAag  115 (226)
T KOG4412|consen   36 QDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASNGNDEVVKELLNRSGADVNATTNGGQTCLHYAAG  115 (226)
T ss_pred             ccCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhcCcHHHHHHHhcCCCCCcceecCCCcceehhhhc
Confidence            388999999999999999999995 4678888999999999999999999999999998 99999999999999999999


Q ss_pred             cCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccCC
Q 031662           98 NGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELGG  151 (155)
Q Consensus        98 ~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~  151 (155)
                      .|+.+++++|+++|+.++.+|..|+||||-|+..|..+++++|+..|+.++.++
T Consensus       116 K~r~eIaqlLle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~~~a~~n~qD  169 (226)
T KOG4412|consen  116 KGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGAPLNTQD  169 (226)
T ss_pred             CChhhHHHHHHhcCCCCcccccccCchhHHHHhccchhhHHHHHhcCCCCCccc
Confidence            999999999999999999999999999999999999999999999999988654


No 3  
>PHA02791 ankyrin-like protein; Provisional
Probab=99.97  E-value=1.3e-29  Score=170.62  Aligned_cols=138  Identities=16%  Similarity=0.117  Sum_probs=85.9

Q ss_pred             CCccCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCc-cHHHHHHhCCCHHHHHHHHhcCCCCCCCC-CCCCC
Q 031662           13 QTTETSSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGR-TALHMASANGHLGIVEYLIGRGVDINASN-EEKNT   90 (155)
Q Consensus        13 ~~~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~-~~l~~a~~~~~~~~~~~ll~~~~~~~~~~-~~~~t   90 (155)
                      .+....+..|.||||+|+..|+.+++++|++.|++++.++..|+ ||||+|+..++.+++++|++++...  .+ ..|.|
T Consensus        85 advn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~--~d~~~g~T  162 (284)
T PHA02791         85 MDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST--FDLAILLS  162 (284)
T ss_pred             CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCcc--cccccCcc
Confidence            33444455566666666666666666666666666555555543 5666666666666666666554322  12 23567


Q ss_pred             HHHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCH-HHHHHHCCCHHHHHHHHHHHhhcccCCC
Q 031662           91 PLHYACLNGHTEVAKKLVLSGANISVLNSHEQTP-IDEALSRGKMDIIDAINTAVAQLELGGF  152 (155)
Q Consensus        91 ~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~-l~~a~~~~~~~~~~~L~~~g~~~~~~~~  152 (155)
                      |||+|+..|+.+++++|+++|++++.++..|.|| ||+|+..|+.+++++|+++|++++.+++
T Consensus       163 pLh~Aa~~g~~eiv~lLL~~gAd~n~~d~~g~t~~L~~Aa~~~~~e~v~lLl~~Ga~in~~~~  225 (284)
T PHA02791        163 CIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDLEMLQALFKYDINIYSVNL  225 (284)
T ss_pred             HHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCcc
Confidence            7777777777777777777777777777666665 7777777777777777777777765543


No 4  
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.97  E-value=1.9e-29  Score=178.64  Aligned_cols=140  Identities=27%  Similarity=0.370  Sum_probs=132.9

Q ss_pred             CCCccCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCC-CccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCC
Q 031662           12 TQTTETSSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQ-GRTALHMASANGHLGIVEYLIGRGVDINASNEEKNT   90 (155)
Q Consensus        12 ~~~~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t   90 (155)
                      +..++.+|..|.++||+|+.+++++++++|+++|+++|...+. +.||||+|+++|+..+++.|+++|++++.+|.+|.+
T Consensus        68 g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G~~~vv~lLlqhGAdpt~~D~~G~~  147 (600)
T KOG0509|consen   68 GESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARNGHISVVDLLLQHGADPTLKDKQGLT  147 (600)
T ss_pred             CcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcCcHHHHHHHHHcCCCCceecCCCCc
Confidence            6777888889999999999999999999999999999998854 899999999999999999999999999999999999


Q ss_pred             HHHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccCC
Q 031662           91 PLHYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELGG  151 (155)
Q Consensus        91 ~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~  151 (155)
                      |+|.|++.++...+-+|+.++++++.+|.+|+|||++|+.+|+...+..|+..|+.+...+
T Consensus       148 ~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f~a~~~~~d  208 (600)
T KOG0509|consen  148 PLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAYKGFALFVRRLLKFGASLLLTD  208 (600)
T ss_pred             HHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHHhcccHHHHHHHHhcccccccc
Confidence            9999999999999999999999999999999999999999999888999999999887665


No 5  
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.96  E-value=2e-28  Score=174.17  Aligned_cols=131  Identities=22%  Similarity=0.271  Sum_probs=100.3

Q ss_pred             CcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhc
Q 031662           19 SPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACLN   98 (155)
Q Consensus        19 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~   98 (155)
                      +..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.+++++|+++|++++.+|..|.||||+|+..
T Consensus        99 ~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~  178 (413)
T PHA02875         99 YKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAK  178 (413)
T ss_pred             cCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHc
Confidence            34567777777777777777777777777777777777777777777777777777777777777777777777777777


Q ss_pred             CcHHHHHHHHHcCCCCcccCCCCC-CHHHHHHHCCCHHHHHHHHHHHhhccc
Q 031662           99 GHTEVAKKLVLSGANISVLNSHEQ-TPIDEALSRGKMDIIDAINTAVAQLEL  149 (155)
Q Consensus        99 ~~~~~~~~Ll~~~~~~~~~~~~~~-t~l~~a~~~~~~~~~~~L~~~g~~~~~  149 (155)
                      |+.+++++|++.|++++..+..|. ||+++|+..++.+++++|+++|++++.
T Consensus       179 g~~eiv~~Ll~~ga~~n~~~~~~~~t~l~~A~~~~~~~iv~~Ll~~gad~n~  230 (413)
T PHA02875        179 GDIAICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFIKRGADCNI  230 (413)
T ss_pred             CCHHHHHHHHhCCCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHHCCcCcch
Confidence            777777777777777777766664 667777777777777777777777764


No 6  
>PHA02791 ankyrin-like protein; Provisional
Probab=99.96  E-value=1.8e-28  Score=165.20  Aligned_cols=128  Identities=16%  Similarity=0.158  Sum_probs=103.4

Q ss_pred             cHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCC-CCHHHHHHhcCc
Q 031662           22 NIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEK-NTPLHYACLNGH  100 (155)
Q Consensus        22 ~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~-~t~l~~a~~~~~  100 (155)
                      +.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.+++++|+++|++++.++..| .||||+|+..|+
T Consensus        61 ~~TpLh~Aa~~g~~eiV~lLL~~Gadvn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~  140 (284)
T PHA02791         61 NEFPLHQAATLEDTKIVKILLFSGMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLND  140 (284)
T ss_pred             CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCC
Confidence            4678888888888888888888888888888888888888888888888888888888888777776 478888888888


Q ss_pred             HHHHHHHHHcCCCCcccC-CCCCCHHHHHHHCCCHHHHHHHHHHHhhcccCC
Q 031662          101 TEVAKKLVLSGANISVLN-SHEQTPIDEALSRGKMDIIDAINTAVAQLELGG  151 (155)
Q Consensus       101 ~~~~~~Ll~~~~~~~~~~-~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~  151 (155)
                      .+++++|++++.+..  + ..|.||||+|+..|+.+++++|+++|++++..+
T Consensus       141 ~eivk~LL~~~~~~~--d~~~g~TpLh~Aa~~g~~eiv~lLL~~gAd~n~~d  190 (284)
T PHA02791        141 VSIVSYFLSEIPSTF--DLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNN  190 (284)
T ss_pred             HHHHHHHHhcCCccc--ccccCccHHHHHHHcCCHHHHHHHHHCCCCCCccc
Confidence            888888888765432  2 247889999999999999999999888877654


No 7  
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.96  E-value=3.5e-28  Score=152.97  Aligned_cols=141  Identities=23%  Similarity=0.246  Sum_probs=124.7

Q ss_pred             CCccCCCcccHHHHHHHHHhCCH----HHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHH---HHHHHHhcCCCCCCCC
Q 031662           13 QTTETSSPENIDALLAAARYDDI----EDVISLASAGVPLDSKDSQGRTALHMASANGHLG---IVEYLIGRGVDINASN   85 (155)
Q Consensus        13 ~~~~~~~~~~~~~l~~A~~~~~~----~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~---~~~~ll~~~~~~~~~~   85 (155)
                      .++...+..+.++||.|++.|++    ++++++++.+..++..|..|+||||+|+..++.+   ++++|++.|++++.++
T Consensus        11 ~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~d   90 (166)
T PHA02743         11 LGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINARE   90 (166)
T ss_pred             hHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCCC
Confidence            33434456677889999999998    5666778889889989999999999999998754   4899999999999998


Q ss_pred             -CCCCCHHHHHHhcCcHHHHHHHHH-cCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccCCCc
Q 031662           86 -EEKNTPLHYACLNGHTEVAKKLVL-SGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELGGFT  153 (155)
Q Consensus        86 -~~~~t~l~~a~~~~~~~~~~~Ll~-~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~  153 (155)
                       ..|.||||+|+..++.+++++|++ .|++++.++..|+|||++|+..++.+++++|+++|++++.++-.
T Consensus        91 ~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~  160 (166)
T PHA02743         91 LGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMMEILRANGAVCDDPLSI  160 (166)
T ss_pred             CCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcccC
Confidence             589999999999999999999995 79999999999999999999999999999999999999876643


No 8  
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.96  E-value=5.3e-28  Score=171.99  Aligned_cols=132  Identities=27%  Similarity=0.361  Sum_probs=106.6

Q ss_pred             cccHHHHHHHHHhCCHHHHHHHHHcCCCCC-CCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhc
Q 031662           20 PENIDALLAAARYDDIEDVISLASAGVPLD-SKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACLN   98 (155)
Q Consensus        20 ~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~-~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~   98 (155)
                      ..+.+|||.|++.|+.+++++|++.+...+ ..+..|.||||+|+..++.+++++|+++|++++.++..|.||||+|+..
T Consensus        66 ~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~  145 (413)
T PHA02875         66 PDIESELHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMM  145 (413)
T ss_pred             CCcccHHHHHHHCCCHHHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHc
Confidence            334455555555555555555555554332 2345688999999999999999999999999999999999999999999


Q ss_pred             CcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccCC
Q 031662           99 GHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELGG  151 (155)
Q Consensus        99 ~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~  151 (155)
                      |+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++..+
T Consensus       146 ~~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~~~  198 (413)
T PHA02875        146 GDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFG  198 (413)
T ss_pred             CCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCcCC
Confidence            99999999999999999999999999999999999999999999999887654


No 9  
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.96  E-value=4e-29  Score=176.98  Aligned_cols=144  Identities=28%  Similarity=0.391  Sum_probs=130.8

Q ss_pred             CCCCCcccccCCCccCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCC
Q 031662            2 EQDADPSINRTQTTETSSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDI   81 (155)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~   81 (155)
                      ++||+.+.-.|       ..+.||||+|+++|++.++.+|+++|++++.+|..|.+++|.|+.+++..++-+++.+++++
T Consensus        99 ~~gadvn~~gG-------~l~stPLHWAar~G~~~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~  171 (600)
T KOG0509|consen   99 SHGADVNAIGG-------VLGSTPLHWAARNGHISVVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADI  171 (600)
T ss_pred             HcCCCccccCC-------CCCCCcchHHHHcCcHHHHHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccC
Confidence            34555554444       46679999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcccC-CCCCCHHHHHHHCCCHHHHHHHHHHHhhcccCCC
Q 031662           82 NASNEEKNTPLHYACLNGHTEVAKKLVLSGANISVLN-SHEQTPIDEALSRGKMDIIDAINTAVAQLELGGF  152 (155)
Q Consensus        82 ~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~-~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~  152 (155)
                      +.+|..|+|||+||+.+|....+..|++.|+.+...| ..|.||||+|+..|+..++.+|++.|++.+..+-
T Consensus       172 d~~D~~grTpLmwAaykg~~~~v~~LL~f~a~~~~~d~~~g~TpLHwa~~~gN~~~v~Ll~~g~~~~d~~~~  243 (600)
T KOG0509|consen  172 DLRDNNGRTPLMWAAYKGFALFVRRLLKFGASLLLTDDNHGNTPLHWAVVGGNLTAVKLLLEGGADLDKTNT  243 (600)
T ss_pred             CCcCCCCCCHHHHHHHhcccHHHHHHHHhcccccccccccCCchHHHHHhcCCcceEehhhhcCCccccccc
Confidence            9999999999999999999988999999999999988 9999999999999999999988888888876553


No 10 
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.96  E-value=8.9e-28  Score=156.26  Aligned_cols=137  Identities=18%  Similarity=0.178  Sum_probs=122.1

Q ss_pred             cCCCcccHHHHHHHHHhC--CHHHHHHHHHcCCCCCCCC-CCCccHHHHHHhC---CCHHHHHHHHhcCCCCCCCCCCCC
Q 031662           16 ETSSPENIDALLAAARYD--DIEDVISLASAGVPLDSKD-SQGRTALHMASAN---GHLGIVEYLIGRGVDINASNEEKN   89 (155)
Q Consensus        16 ~~~~~~~~~~l~~A~~~~--~~~~v~~ll~~~~~~~~~~-~~~~~~l~~a~~~---~~~~~~~~ll~~~~~~~~~~~~~~   89 (155)
                      ...+..|.||||.|+..+  +.+++++|+++|++++.++ ..|.||||+|+..   ++.+++++|+++|++++.+|..|.
T Consensus        45 n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadin~~d~~G~  124 (209)
T PHA02859         45 NDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSITEEDEDGK  124 (209)
T ss_pred             hccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHHHHhCccccHHHHHHHHHCCCCCCCcCCCCC
Confidence            345678999999999854  8999999999999999987 4799999998764   478999999999999999999999


Q ss_pred             CHHHHHHh--cCcHHHHHHHHHcCCCCcccCCCCCCHHHH-HHHCCCHHHHHHHHHHHhhcccCCC
Q 031662           90 TPLHYACL--NGHTEVAKKLVLSGANISVLNSHEQTPIDE-ALSRGKMDIIDAINTAVAQLELGGF  152 (155)
Q Consensus        90 t~l~~a~~--~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~-a~~~~~~~~~~~L~~~g~~~~~~~~  152 (155)
                      ||||+|+.  .++.+++++|++.|++++.+|..|.||||. ++..++.+++++|+++|++++..+.
T Consensus       125 TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~Gadi~~~d~  190 (209)
T PHA02859        125 NLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFHSDKKIFDFLTSLGIDINETNK  190 (209)
T ss_pred             CHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHhcCCHHHHHHHHHcCCCCCCCCC
Confidence            99999876  468999999999999999999999999995 5678899999999999999986653


No 11 
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.96  E-value=5.2e-28  Score=174.71  Aligned_cols=141  Identities=18%  Similarity=0.153  Sum_probs=129.2

Q ss_pred             ccCCCccCCCcc-cHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCC
Q 031662           10 NRTQTTETSSPE-NIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEK   88 (155)
Q Consensus        10 ~~~~~~~~~~~~-~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~   88 (155)
                      +.+.++...+.. |.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..++.+++++|++.|++++.+|..|
T Consensus       155 ~~gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g  234 (477)
T PHA02878        155 SYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCG  234 (477)
T ss_pred             HcCCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCC
Confidence            345555666666 9999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHhc-CcHHHHHHHHHcCCCCcccCC-CCCCHHHHHHHCCCHHHHHHHHHHHhhcccCCC
Q 031662           89 NTPLHYACLN-GHTEVAKKLVLSGANISVLNS-HEQTPIDEALSRGKMDIIDAINTAVAQLELGGF  152 (155)
Q Consensus        89 ~t~l~~a~~~-~~~~~~~~Ll~~~~~~~~~~~-~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~  152 (155)
                      .||||+|+.. ++.+++++|+++|++++.++. .|.||||+|  .++.+++++|+++|++++..+.
T Consensus       235 ~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~~~~g~TpLh~A--~~~~~~v~~Ll~~gadin~~d~  298 (477)
T PHA02878        235 NTPLHISVGYCKDYDILKLLLEHGVDVNAKSYILGLTALHSS--IKSERKLKLLLEYGADINSLNS  298 (477)
T ss_pred             CCHHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCCCHHHHH--ccCHHHHHHHHHCCCCCCCcCC
Confidence            9999999975 789999999999999999875 799999999  5789999999999999987654


No 12 
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.96  E-value=2.8e-27  Score=169.16  Aligned_cols=142  Identities=23%  Similarity=0.322  Sum_probs=124.2

Q ss_pred             cCCCccCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCC
Q 031662           11 RTQTTETSSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNT   90 (155)
Q Consensus        11 ~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t   90 (155)
                      .+.+....+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.+++++|+++|++++.++..|.|
T Consensus       113 ~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~t  192 (434)
T PHA02874        113 CGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGES  192 (434)
T ss_pred             CcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCC
Confidence            44556667788999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCcHHHHHHHHHcCCCC-------------------------------cccCCCCCCHHHHHHHCC-CHHHHH
Q 031662           91 PLHYACLNGHTEVAKKLVLSGANI-------------------------------SVLNSHEQTPIDEALSRG-KMDIID  138 (155)
Q Consensus        91 ~l~~a~~~~~~~~~~~Ll~~~~~~-------------------------------~~~~~~~~t~l~~a~~~~-~~~~~~  138 (155)
                      |||+|+..|+.+++++|+++|+++                               +.++..|+||||+|+..+ +.++++
T Consensus       193 pL~~A~~~g~~~iv~~Ll~~g~~i~~~~~~g~TpL~~A~~~~~~~i~~Ll~~~~in~~d~~G~TpLh~A~~~~~~~~iv~  272 (434)
T PHA02874        193 PLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHNRSAIELLINNASINDQDIDGSTPLHHAINPPCDIDIID  272 (434)
T ss_pred             HHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHCChHHHHHHHcCCCCCCcCCCCCCHHHHHHhcCCcHHHHH
Confidence            999999999999999999987654                               455667778888888765 688999


Q ss_pred             HHHHHHhhcccCCC
Q 031662          139 AINTAVAQLELGGF  152 (155)
Q Consensus       139 ~L~~~g~~~~~~~~  152 (155)
                      +|+++|++++..+.
T Consensus       273 ~Ll~~gad~n~~d~  286 (434)
T PHA02874        273 ILLYHKADISIKDN  286 (434)
T ss_pred             HHHHCcCCCCCCCC
Confidence            99999998876653


No 13 
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.96  E-value=2.4e-27  Score=169.54  Aligned_cols=133  Identities=23%  Similarity=0.316  Sum_probs=79.5

Q ss_pred             CCCcccHHHHHHHHHhCCHHHHHHHHHcCC-----------------------CCCCCCCCCccHHHHHHhCCCHHHHHH
Q 031662           17 TSSPENIDALLAAARYDDIEDVISLASAGV-----------------------PLDSKDSQGRTALHMASANGHLGIVEY   73 (155)
Q Consensus        17 ~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~-----------------------~~~~~~~~~~~~l~~a~~~~~~~~~~~   73 (155)
                      ..+..+.+||+.|++.|+.+++++|++.|.                       +++.++..|.||||+|+..++.+++++
T Consensus        63 ~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~  142 (434)
T PHA02874         63 HINTKIPHPLLTAIKIGAHDIIKLLIDNGVDTSILPIPCIEKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKM  142 (434)
T ss_pred             CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcchhccCCHHHHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHH
Confidence            334445555555555555555555554432                       233344556666666666666666666


Q ss_pred             HHhcCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhccc
Q 031662           74 LIGRGVDINASNEEKNTPLHYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLEL  149 (155)
Q Consensus        74 ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~  149 (155)
                      |+++|++++.++..|.||||+|+..++.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++.
T Consensus       143 Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~~  218 (434)
T PHA02874        143 LFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMN  218 (434)
T ss_pred             HHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCcC
Confidence            6666666666666666666666666666666666666666666666666666666666666666666666665543


No 14 
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.95  E-value=2.2e-27  Score=171.47  Aligned_cols=115  Identities=24%  Similarity=0.359  Sum_probs=107.5

Q ss_pred             HHHHHHHcCCCCCCCCCC-CccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCc
Q 031662           37 DVISLASAGVPLDSKDSQ-GRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACLNGHTEVAKKLVLSGANIS  115 (155)
Q Consensus        37 ~v~~ll~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~  115 (155)
                      ++++|++.|++++..+.. |.||||+|+..++.+++++|++.|++++.++..|.||||+|+..++.+++++|++.|++++
T Consensus       149 iv~~Ll~~gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in  228 (477)
T PHA02878        149 ITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTD  228 (477)
T ss_pred             HHHHHHHcCCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence            666677778888888888 9999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCHHHHHHHC-CCHHHHHHHHHHHhhcccCC
Q 031662          116 VLNSHEQTPIDEALSR-GKMDIIDAINTAVAQLELGG  151 (155)
Q Consensus       116 ~~~~~~~t~l~~a~~~-~~~~~~~~L~~~g~~~~~~~  151 (155)
                      .++..|.||||+|+.. ++.+++++|+++|++++..+
T Consensus       229 ~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~  265 (477)
T PHA02878        229 ARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKS  265 (477)
T ss_pred             CCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCccC
Confidence            9999999999999975 78999999999999998654


No 15 
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.95  E-value=2.1e-27  Score=171.72  Aligned_cols=139  Identities=24%  Similarity=0.371  Sum_probs=83.3

Q ss_pred             CCccCCCcccHHHHHHHHHhC--CHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCC--
Q 031662           13 QTTETSSPENIDALLAAARYD--DIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEK--   88 (155)
Q Consensus        13 ~~~~~~~~~~~~~l~~A~~~~--~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~--   88 (155)
                      .+....+..|.||||.|+..+  +.+++++|++.|++++..+..|.||||+|+..++.+++++|+++|++++..+..+  
T Consensus       132 ~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~  211 (480)
T PHA03100        132 ANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINAKNRYGYTPLHIAVEKGNIDVIKFLLDNGADINAGDIETLL  211 (480)
T ss_pred             CCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCcccccCCCCCHHHHHHHhCCHHHHHHHHHcCCCccCCCCCCCc
Confidence            333444555566666666666  5666666666666666555556666666666666666666665555555555555  


Q ss_pred             ----CCHHHHHHhcCc--HHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccCC
Q 031662           89 ----NTPLHYACLNGH--TEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELGG  151 (155)
Q Consensus        89 ----~t~l~~a~~~~~--~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~  151 (155)
                          .||+|+|+..++  .+++++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++..+
T Consensus       212 ~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din~~d~~g~TpL~~A~~~~~~~iv~~Ll~~gad~n~~d  280 (480)
T PHA03100        212 FTIFETPLHIAACYNEITLEVVNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVN  280 (480)
T ss_pred             HHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccC
Confidence                555555555555  566666666666666666666666666666666666666666666655443


No 16 
>PHA02741 hypothetical protein; Provisional
Probab=99.95  E-value=6.6e-27  Score=147.71  Aligned_cols=132  Identities=23%  Similarity=0.381  Sum_probs=120.5

Q ss_pred             cCCCcccHHHHHHHHHhCCHHHHHHHHH------cCCCCCCCCCCCccHHHHHHhCCC----HHHHHHHHhcCCCCCCCC
Q 031662           16 ETSSPENIDALLAAARYDDIEDVISLAS------AGVPLDSKDSQGRTALHMASANGH----LGIVEYLIGRGVDINASN   85 (155)
Q Consensus        16 ~~~~~~~~~~l~~A~~~~~~~~v~~ll~------~~~~~~~~~~~~~~~l~~a~~~~~----~~~~~~ll~~~~~~~~~~   85 (155)
                      ...+..|.|+||+|++.|+.+++++++.      .+.+++.++..|.||||+|+..++    .+++++|++.|++++.++
T Consensus        15 ~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~   94 (169)
T PHA02741         15 AEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQE   94 (169)
T ss_pred             hccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCC
Confidence            3456789999999999999999999854      257788899999999999999998    588999999999999998


Q ss_pred             C-CCCCHHHHHHhcCcHHHHHHHHH-cCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhc
Q 031662           86 E-EKNTPLHYACLNGHTEVAKKLVL-SGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQL  147 (155)
Q Consensus        86 ~-~~~t~l~~a~~~~~~~~~~~Ll~-~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~  147 (155)
                      . .|.||||+|+..++.+++++|++ .|++++..+..|+|||++|+..++.+++++|+++++..
T Consensus        95 ~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~~~  158 (169)
T PHA02741         95 MLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQILREIVATS  158 (169)
T ss_pred             cCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHh
Confidence            5 89999999999999999999997 59999999999999999999999999999999998664


No 17 
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.95  E-value=1.1e-26  Score=167.97  Aligned_cols=141  Identities=26%  Similarity=0.335  Sum_probs=124.6

Q ss_pred             cCCCccCCCcccHHHHHH-----HHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHH--hCCCHHHHHHHHhcCCCCCC
Q 031662           11 RTQTTETSSPENIDALLA-----AARYDDIEDVISLASAGVPLDSKDSQGRTALHMAS--ANGHLGIVEYLIGRGVDINA   83 (155)
Q Consensus        11 ~~~~~~~~~~~~~~~l~~-----A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~--~~~~~~~~~~ll~~~~~~~~   83 (155)
                      .|.++...+..+.+|||.     |+..++.+++++|++.|++++..+..|.||||+|+  ..++.+++++|+++|++++.
T Consensus        57 ~g~~~~~~~~~~~t~L~~~~~~~a~~~~~~~iv~~Ll~~ga~i~~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~~  136 (480)
T PHA03100         57 NGADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYGANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNI  136 (480)
T ss_pred             cCCCCCCccccCcCHHHHHHHHHHHhhchHHHHHHHHHCCCCCCCCCCCCCchhhHHHhcccChHHHHHHHHHcCCCCCc
Confidence            444455556677889999     99999999999999999999888888999999999  88999999999999999999


Q ss_pred             CCCCCCCHHHHHHhcC--cHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccCC
Q 031662           84 SNEEKNTPLHYACLNG--HTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELGG  151 (155)
Q Consensus        84 ~~~~~~t~l~~a~~~~--~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~  151 (155)
                      .+..|.||||+|+..+  +.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++..+
T Consensus       137 ~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~  206 (480)
T PHA03100        137 KNSDGENLLHLYLESNKIDLKILKLLIDKGVDINAKNRYGYTPLHIAVEKGNIDVIKFLLDNGADINAGD  206 (480)
T ss_pred             cCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCcccccCCCCCHHHHHHHhCCHHHHHHHHHcCCCccCCC
Confidence            9999999999999999  8999999999999999988899999999999999999999999998887654


No 18 
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.95  E-value=7.9e-27  Score=172.85  Aligned_cols=142  Identities=18%  Similarity=0.185  Sum_probs=102.2

Q ss_pred             ccCCCccCCCcccHHHHHHHHHhCC--HHHHHHHHHcCCCCCCCCCCCccHHHHH-------------------------
Q 031662           10 NRTQTTETSSPENIDALLAAARYDD--IEDVISLASAGVPLDSKDSQGRTALHMA-------------------------   62 (155)
Q Consensus        10 ~~~~~~~~~~~~~~~~l~~A~~~~~--~~~v~~ll~~~~~~~~~~~~~~~~l~~a-------------------------   62 (155)
                      +.|.+++..+..|.||||+|++.|+  .+++++|++.|++++.++..|.||||+|                         
T Consensus       200 e~GADVN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~  279 (764)
T PHA02716        200 NNGVNVNLQNNHLITPLHTYLITGNVCASVIKKIIELGGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVK  279 (764)
T ss_pred             HcCCCCCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccc
Confidence            3455566666777778888877774  4777778877777777777777777754                         


Q ss_pred             ------------HhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHh--cCcHHHHHHHHHcCCCCcccCCCCCCHHHHH
Q 031662           63 ------------SANGHLGIVEYLIGRGVDINASNEEKNTPLHYACL--NGHTEVAKKLVLSGANISVLNSHEQTPIDEA  128 (155)
Q Consensus        63 ------------~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~--~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a  128 (155)
                                  +..++.+++++|++.|++++.+|..|+||||+|+.  .++.+++++|++.|++++.+|..|+||||+|
T Consensus       280 ~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~kD~~G~TPLH~A  359 (764)
T PHA02716        280 NIPMILHSYITLARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNEPDNIGNTVLHTY  359 (764)
T ss_pred             cchhhhHHHHHHHHcCCHHHHHHHHhCCCceeccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCCccCCCCCCCHHHHH
Confidence                        23456677777777777777777777888877653  3467777877777877777777778888776


Q ss_pred             HH--------------CCCHHHHHHHHHHHhhcccCC
Q 031662          129 LS--------------RGKMDIIDAINTAVAQLELGG  151 (155)
Q Consensus       129 ~~--------------~~~~~~~~~L~~~g~~~~~~~  151 (155)
                      +.              .++.+++++|+++|++++..+
T Consensus       360 ~~~lav~~~ld~~~~~~~~~eVVklLL~~GADIn~kn  396 (764)
T PHA02716        360 LSMLSVVNILDPETDNDIRLDVIQCLISLGADITAVN  396 (764)
T ss_pred             HHhhhhhccccccccccChHHHHHHHHHCCCCCCCcC
Confidence            54              256778888888877776554


No 19 
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.95  E-value=9.3e-27  Score=176.91  Aligned_cols=137  Identities=18%  Similarity=0.182  Sum_probs=98.9

Q ss_pred             CCccCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHH
Q 031662           13 QTTETSSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPL   92 (155)
Q Consensus        13 ~~~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l   92 (155)
                      .+.+..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|++.+...+.  ..+.++|
T Consensus       549 ~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~~--~~~~~~L  626 (823)
T PLN03192        549 LDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHKIFRILYHFASISDP--HAAGDLL  626 (823)
T ss_pred             CCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHhcCcccCc--ccCchHH
Confidence            33444455566666666666666666666666666666666666666666666666666666655443332  2344566


Q ss_pred             HHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccCC
Q 031662           93 HYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELGG  151 (155)
Q Consensus        93 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~  151 (155)
                      |+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+
T Consensus       627 ~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~GAdv~~~~  685 (823)
T PLN03192        627 CTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVDKAN  685 (823)
T ss_pred             HHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCCC
Confidence            67778888888889999999999999999999999999999999999999999998765


No 20 
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.95  E-value=2.4e-27  Score=163.40  Aligned_cols=135  Identities=27%  Similarity=0.450  Sum_probs=92.0

Q ss_pred             CCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHh
Q 031662           18 SSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACL   97 (155)
Q Consensus        18 ~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~   97 (155)
                      ..-.|..||-.|+..|++++|+.|+.+|+++|.......|||..||.-|+.+++++|+++|++++..|+.|.|.|++||.
T Consensus        80 e~IegappLWaAsaAGHl~vVk~L~~~ga~VN~tT~TNStPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~y  159 (615)
T KOG0508|consen   80 ETIEGAPPLWAASAAGHLEVVKLLLRRGASVNDTTRTNSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACY  159 (615)
T ss_pred             cccCCCchhhHHhccCcHHHHHHHHHhcCccccccccCCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeec
Confidence            34455566666666677777777777766666666666667777777777777777777677776667777777777777


Q ss_pred             cCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccCCC
Q 031662           98 NGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELGGF  152 (155)
Q Consensus        98 ~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~  152 (155)
                      .|+.+++++|++.|++++.++..|.|+||.+++.|+.+++++|+.+|+.++..++
T Consensus       160 kGh~~I~qyLle~gADvn~ks~kGNTALH~caEsG~vdivq~Ll~~ga~i~~d~~  214 (615)
T KOG0508|consen  160 KGHVDIAQYLLEQGADVNAKSYKGNTALHDCAESGSVDIVQLLLKHGAKIDVDGH  214 (615)
T ss_pred             cCchHHHHHHHHhCCCcchhcccCchHHHhhhhcccHHHHHHHHhCCceeeecCC
Confidence            7777777777777777776666777777777777777777777776666665554


No 21 
>PHA02946 ankyin-like protein; Provisional
Probab=99.95  E-value=1.8e-26  Score=164.85  Aligned_cols=141  Identities=21%  Similarity=0.246  Sum_probs=107.3

Q ss_pred             cccCCCccCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCC--CHHHHHHHHhcCCCCCC-CC
Q 031662            9 INRTQTTETSSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANG--HLGIVEYLIGRGVDINA-SN   85 (155)
Q Consensus         9 ~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~--~~~~~~~ll~~~~~~~~-~~   85 (155)
                      ++.+.+++..+..|.||||+|++.|+.+++++|+++|++++.+|..|.||||+|+..+  ..+++++|+++|++++. .+
T Consensus        59 l~~Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d  138 (446)
T PHA02946         59 LHRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVD  138 (446)
T ss_pred             HHCcCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccC
Confidence            3566677778889999999999999999999999999999999999999999998765  37888889988888874 56


Q ss_pred             CCCCCHHHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCC--CHHHHHHHHHHHhhcccC
Q 031662           86 EEKNTPLHYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRG--KMDIIDAINTAVAQLELG  150 (155)
Q Consensus        86 ~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~--~~~~~~~L~~~g~~~~~~  150 (155)
                      ..|.|||+ |+..++.+++++|++.|++++..|..|+||||+|+..+  +.+++++|+++|++++..
T Consensus       139 ~~g~tpL~-aa~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~  204 (446)
T PHA02946        139 EEGCGPLL-ACTDPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKP  204 (446)
T ss_pred             CCCCcHHH-HHHCCChHHHHHHHhccccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCccc
Confidence            77777775 44456666666666666666666666666666655433  346666666666666543


No 22 
>PHA03095 ankyrin-like protein; Provisional
Probab=99.94  E-value=5.4e-26  Score=164.06  Aligned_cols=141  Identities=23%  Similarity=0.293  Sum_probs=127.9

Q ss_pred             ccCCCccCCCcccHHHHHHHHHhC---CHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCC-CHHHHHHHHhcCCCCCCCC
Q 031662           10 NRTQTTETSSPENIDALLAAARYD---DIEDVISLASAGVPLDSKDSQGRTALHMASANG-HLGIVEYLIGRGVDINASN   85 (155)
Q Consensus        10 ~~~~~~~~~~~~~~~~l~~A~~~~---~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~-~~~~~~~ll~~~~~~~~~~   85 (155)
                      +.+.++...+..|.||||.|+..+   +.+++++|++.|++++.++..|.||||+|+..+ +.+++++|+++|++++.++
T Consensus        35 ~~ga~vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~in~~~  114 (471)
T PHA03095         35 AAGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHLYLYNATTLDVIKLLIKAGADVNAKD  114 (471)
T ss_pred             HcCCCcccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCcHHHHHHHHHcCCCCCCCC
Confidence            455666667778999999999998   999999999999999999999999999999999 5999999999999999999


Q ss_pred             CCCCCHHHHHH--hcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCC--CHHHHHHHHHHHhhcccC
Q 031662           86 EEKNTPLHYAC--LNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRG--KMDIIDAINTAVAQLELG  150 (155)
Q Consensus        86 ~~~~t~l~~a~--~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~--~~~~~~~L~~~g~~~~~~  150 (155)
                      ..|.||||+|+  ..++.+++++|+++|++++.++..|.||||+|+..+  +.+++++|+++|+++...
T Consensus       115 ~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~~  183 (471)
T PHA03095        115 KVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVYAV  183 (471)
T ss_pred             CCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCccc
Confidence            99999999999  556889999999999999999999999999988765  689999999999888654


No 23 
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.94  E-value=4e-26  Score=169.16  Aligned_cols=140  Identities=18%  Similarity=0.176  Sum_probs=123.6

Q ss_pred             CCccCC-CcccHHHHHHHHH--hCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCC--HHHHHHHHhcCCCCCCCCCC
Q 031662           13 QTTETS-SPENIDALLAAAR--YDDIEDVISLASAGVPLDSKDSQGRTALHMASANGH--LGIVEYLIGRGVDINASNEE   87 (155)
Q Consensus        13 ~~~~~~-~~~~~~~l~~A~~--~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~--~~~~~~ll~~~~~~~~~~~~   87 (155)
                      .+++.. +..|.||||.|+.  .++.+++++|+++|++++.++..|.||||+|+..++  .+++++|+++|++++.++..
T Consensus       167 ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~kD~~  246 (764)
T PHA02716        167 VNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQNNHLITPLHTYLITGNVCASVIKKIIELGGDMDMKCVN  246 (764)
T ss_pred             CCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCCCCCC
Confidence            445555 6789999999875  468999999999999999999999999999999985  48999999999999999999


Q ss_pred             CCCHHHHH-------------------------------------HhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHH
Q 031662           88 KNTPLHYA-------------------------------------CLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALS  130 (155)
Q Consensus        88 ~~t~l~~a-------------------------------------~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~  130 (155)
                      |.||||+|                                     +..|+.+++++|++.|++++.+|..|+||||+|+.
T Consensus       247 G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH~Aaa  326 (764)
T PHA02716        247 GMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQYIL  326 (764)
T ss_pred             CCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCceeccCCCCCCHHHHHHH
Confidence            99999975                                     34577899999999999999999999999998764


Q ss_pred             --CCCHHHHHHHHHHHhhcccCCC
Q 031662          131 --RGKMDIIDAINTAVAQLELGGF  152 (155)
Q Consensus       131 --~~~~~~~~~L~~~g~~~~~~~~  152 (155)
                        .++.+++++|+++|++++..+.
T Consensus       327 ~~~~~~eIVklLLe~GADIN~kD~  350 (764)
T PHA02716        327 RHNISTDIIKLLHEYGNDLNEPDN  350 (764)
T ss_pred             HhCCCchHHHHHHHcCCCCccCCC
Confidence              5689999999999999986653


No 24 
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.94  E-value=7e-27  Score=161.15  Aligned_cols=133  Identities=29%  Similarity=0.447  Sum_probs=125.9

Q ss_pred             cccCCCccCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCC
Q 031662            9 INRTQTTETSSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEK   88 (155)
Q Consensus         9 ~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~   88 (155)
                      ++++.+++.......|||..||..|+++++++|++++++++..++.|.|.||+||+.|+.+++++|++.|+++|.++..|
T Consensus       104 ~~~ga~VN~tT~TNStPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn~ks~kG  183 (615)
T KOG0508|consen  104 LRRGASVNDTTRTNSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGADVNAKSYKG  183 (615)
T ss_pred             HHhcCccccccccCCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHHHHhCCCcchhcccC
Confidence            45667777777888899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHH
Q 031662           89 NTPLHYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINT  142 (155)
Q Consensus        89 ~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~  142 (155)
                      +|+||.|++.|+.+++++|+++|+.+.. |.+|.|||..|+..|+.++|++|++
T Consensus       184 NTALH~caEsG~vdivq~Ll~~ga~i~~-d~~GmtPL~~Aa~tG~~~iVe~L~~  236 (615)
T KOG0508|consen  184 NTALHDCAESGSVDIVQLLLKHGAKIDV-DGHGMTPLLLAAVTGHTDIVERLLQ  236 (615)
T ss_pred             chHHHhhhhcccHHHHHHHHhCCceeee-cCCCCchHHHHhhhcchHHHHHHhc
Confidence            9999999999999999999999998875 6779999999999999999999995


No 25 
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.94  E-value=2.6e-26  Score=143.11  Aligned_cols=134  Identities=24%  Similarity=0.313  Sum_probs=112.5

Q ss_pred             cCCCcccHHHHHHHHHhCCHHHHHHHHHcCCC-----CCCCCCCCccHHHHHHhCCCH---HHHHHHHhcCCCCCCCC-C
Q 031662           16 ETSSPENIDALLAAARYDDIEDVISLASAGVP-----LDSKDSQGRTALHMASANGHL---GIVEYLIGRGVDINASN-E   86 (155)
Q Consensus        16 ~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~-----~~~~~~~~~~~l~~a~~~~~~---~~~~~ll~~~~~~~~~~-~   86 (155)
                      ...+..|.||||+|++.|+...+........+     ++..+..|.||||+|+..++.   +++++|++.|++++.++ .
T Consensus        11 ~~~d~~g~tpLh~A~~~g~~~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~~~   90 (154)
T PHA02736         11 SEPDIEGENILHYLCRNGGVTDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKERV   90 (154)
T ss_pred             HhcCCCCCCHHHHHHHhCCHHHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCccccCCC
Confidence            34567899999999999985332222221111     234678899999999999876   46899999999999998 5


Q ss_pred             CCCCHHHHHHhcCcHHHHHHHHH-cCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhccc
Q 031662           87 EKNTPLHYACLNGHTEVAKKLVL-SGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLEL  149 (155)
Q Consensus        87 ~~~t~l~~a~~~~~~~~~~~Ll~-~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~  149 (155)
                      .|.||||+|+..++.+++++|++ .|++++.++..|+|||++|+..|+.+++++|+++|++.++
T Consensus        91 ~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~~~  154 (154)
T PHA02736         91 FGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDAKMMNILRAKGAQCKV  154 (154)
T ss_pred             CCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence            89999999999999999999997 5999999999999999999999999999999999988753


No 26 
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.94  E-value=1.2e-25  Score=146.29  Aligned_cols=131  Identities=18%  Similarity=0.220  Sum_probs=116.2

Q ss_pred             CcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCC--CHHHHHHHHhcCCCCCCCC-CCCCCHHHHH
Q 031662           19 SPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANG--HLGIVEYLIGRGVDINASN-EEKNTPLHYA   95 (155)
Q Consensus        19 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~--~~~~~~~ll~~~~~~~~~~-~~~~t~l~~a   95 (155)
                      .+..++||+.|++.|+++.++.|++.   ++..+..|.||||+|+..+  +.+++++|+++|++++.++ ..|.||||+|
T Consensus        18 ~~~~~~pL~~A~~~~~~~~vk~Li~~---~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a   94 (209)
T PHA02859         18 FYRYCNPLFYYVEKDDIEGVKKWIKF---VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHY   94 (209)
T ss_pred             hhccCcHHHHHHHhCcHHHHHHHHHh---hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHH
Confidence            45678999999999999999999975   4567788999999999754  8999999999999999987 5899999998


Q ss_pred             Hhc---CcHHHHHHHHHcCCCCcccCCCCCCHHHHHHH--CCCHHHHHHHHHHHhhcccCCC
Q 031662           96 CLN---GHTEVAKKLVLSGANISVLNSHEQTPIDEALS--RGKMDIIDAINTAVAQLELGGF  152 (155)
Q Consensus        96 ~~~---~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~--~~~~~~~~~L~~~g~~~~~~~~  152 (155)
                      +..   ++.+++++|+++|++++.++..|.||||+|+.  .++.+++++|+++|++++..+.
T Consensus        95 ~~~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~  156 (209)
T PHA02859         95 LSFNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDF  156 (209)
T ss_pred             HHhCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccC
Confidence            764   47899999999999999999999999999876  4689999999999999876653


No 27 
>PHA02795 ankyrin-like protein; Provisional
Probab=99.94  E-value=6.1e-26  Score=158.91  Aligned_cols=127  Identities=20%  Similarity=0.215  Sum_probs=114.0

Q ss_pred             HHHHHHHHHhCCHHHHHHHHHcCCCC-CCCC-----CCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHH
Q 031662           23 IDALLAAARYDDIEDVISLASAGVPL-DSKD-----SQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYAC   96 (155)
Q Consensus        23 ~~~l~~A~~~~~~~~v~~ll~~~~~~-~~~~-----~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~   96 (155)
                      .||+|.|+..++.+++++|+++|++. +..+     ..+.+++|.|...++.+++++|+++|++++.+|..|.||||+|+
T Consensus       150 ~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN~kD~~G~TpLh~Aa  229 (437)
T PHA02795        150 LNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDINQLDAGGRTLLYRAI  229 (437)
T ss_pred             CCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcCcCCCCCCCHHHHHH
Confidence            57999999999999999999999743 2221     23678899999999999999999999999999999999999999


Q ss_pred             hcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCC--------HHHHHHHHHHHhhccc
Q 031662           97 LNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGK--------MDIIDAINTAVAQLEL  149 (155)
Q Consensus        97 ~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~--------~~~~~~L~~~g~~~~~  149 (155)
                      ..|+.+++++|+++|++++.++..|+||||+|+..|+        .+++++|+++|++++.
T Consensus       230 ~~g~~eiVelLL~~GAdIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~gadI~~  290 (437)
T PHA02795        230 YAGYIDLVSWLLENGANVNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLREPLSIDC  290 (437)
T ss_pred             HcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCCCCCCc
Confidence            9999999999999999999999999999999999884        6999999999998864


No 28 
>PHA03095 ankyrin-like protein; Provisional
Probab=99.94  E-value=1.9e-25  Score=161.23  Aligned_cols=135  Identities=24%  Similarity=0.281  Sum_probs=106.1

Q ss_pred             CccCCCcccHHHHHHHHHh--CCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCH--HHHHHHHhcCCCCCCCCCCCC
Q 031662           14 TTETSSPENIDALLAAARY--DDIEDVISLASAGVPLDSKDSQGRTALHMASANGHL--GIVEYLIGRGVDINASNEEKN   89 (155)
Q Consensus        14 ~~~~~~~~~~~~l~~A~~~--~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~--~~~~~ll~~~~~~~~~~~~~~   89 (155)
                      +....+..|.||||.++..  ++.++++.|++.|++++.++..|.||||+|+..++.  ..++.++..|++++.+|..|.
T Consensus       179 ~~~~~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~din~~d~~g~  258 (471)
T PHA03095        179 DVYAVDDRFRSLLHHHLQSFKPRARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISINARNRYGQ  258 (471)
T ss_pred             CCcccCCCCCCHHHHHHHHCCCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCchHHHHHHHHHcCCCCCCcCCCCC
Confidence            3334456677777777754  667777777777777777777888888888877754  567777888888888888888


Q ss_pred             CHHHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcc
Q 031662           90 TPLHYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLE  148 (155)
Q Consensus        90 t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~  148 (155)
                      ||||+|+..|+.+++++|++.|++++.++..|+||+++|+..|+.+++++|++.+++++
T Consensus       259 TpLh~A~~~~~~~~v~~LL~~gad~n~~~~~g~tpl~~A~~~~~~~~v~~LL~~~~~~~  317 (471)
T PHA03095        259 TPLHYAAVFNNPRACRRLIALGADINAVSSDGNTPLSLMVRNNNGRAVRAALAKNPSAE  317 (471)
T ss_pred             CHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCHH
Confidence            88888888888888888888888888888888888888888888888888888877664


No 29 
>PHA02798 ankyrin-like protein; Provisional
Probab=99.94  E-value=2.3e-25  Score=161.32  Aligned_cols=140  Identities=19%  Similarity=0.262  Sum_probs=77.4

Q ss_pred             CCCccCCCcccHHHHHHHHHhC---CHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCC---HHHHHHHHhcCCCCCCCC
Q 031662           12 TQTTETSSPENIDALLAAARYD---DIEDVISLASAGVPLDSKDSQGRTALHMASANGH---LGIVEYLIGRGVDINASN   85 (155)
Q Consensus        12 ~~~~~~~~~~~~~~l~~A~~~~---~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~---~~~~~~ll~~~~~~~~~~   85 (155)
                      |++++..+..|.||||+|+..+   +.+++++|+++|++++.++..|.||||+|+..++   .+++++|++.|++++.++
T Consensus        99 GadiN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~  178 (489)
T PHA02798         99 GADINKKNSDGETPLYCLLSNGYINNLEILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHN  178 (489)
T ss_pred             CCCCCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCccccc
Confidence            3444445556666666666653   5566666666666666666666666666666555   566666666655555442


Q ss_pred             -CCCCCHHHHHHhc----CcHHHHHHHHHcCCC---------------------------------------CcccCCCC
Q 031662           86 -EEKNTPLHYACLN----GHTEVAKKLVLSGAN---------------------------------------ISVLNSHE  121 (155)
Q Consensus        86 -~~~~t~l~~a~~~----~~~~~~~~Ll~~~~~---------------------------------------~~~~~~~~  121 (155)
                       ..+.||+|.++..    ++.+++++|+++|++                                       ++.+|..|
T Consensus       179 ~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~~~dvN~~d~~G  258 (489)
T PHA02798        179 NKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFSYIDINQVDELG  258 (489)
T ss_pred             CcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHhcCCCCCcCcCC
Confidence             2344444443322    234444444443322                                       22334456


Q ss_pred             CCHHHHHHHCCCHHHHHHHHHHHhhcccCC
Q 031662          122 QTPIDEALSRGKMDIIDAINTAVAQLELGG  151 (155)
Q Consensus       122 ~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~  151 (155)
                      +||||+|+..++.+++++|+++|++++..+
T Consensus       259 ~TPL~~A~~~~~~~~v~~LL~~GAdin~~d  288 (489)
T PHA02798        259 FNPLYYSVSHNNRKIFEYLLQLGGDINIIT  288 (489)
T ss_pred             ccHHHHHHHcCcHHHHHHHHHcCCcccccC
Confidence            666666666666666666666666665443


No 30 
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.94  E-value=7e-26  Score=164.39  Aligned_cols=136  Identities=26%  Similarity=0.325  Sum_probs=125.6

Q ss_pred             ccCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHh-cC-CCCCCCCCCCCCHH
Q 031662           15 TETSSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIG-RG-VDINASNEEKNTPL   92 (155)
Q Consensus        15 ~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~-~~-~~~~~~~~~~~t~l   92 (155)
                      +...+..|.||||+|++.|.++++..|+..|++++.+..++.||||+|+.+|++.+++-|++ .+ ...+..|..|+|||
T Consensus       266 v~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpL  345 (929)
T KOG0510|consen  266 VNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPL  345 (929)
T ss_pred             hhcccccCCchHHHHHHcCChhHHHHHHHcCCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCch
Confidence            34667899999999999999999999999999999999999999999999999999999998 43 44677899999999


Q ss_pred             HHHHhcCcHHHHHHHHHcCCCCc---ccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccC
Q 031662           93 HYACLNGHTEVAKKLVLSGANIS---VLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELG  150 (155)
Q Consensus        93 ~~a~~~~~~~~~~~Ll~~~~~~~---~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~  150 (155)
                      |+|+..|+.+++++|++.|+...   -.|.+|.||||.|+..|+..++++|+.+|+++...
T Consensus       346 Hlaa~~gH~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~~g~~~av~~Li~~Ga~I~~~  406 (929)
T KOG0510|consen  346 HLAAKSGHDRVVQLLLNKGALFLNMSEADSDGNTALHLAAKYGNTSAVQKLISHGADIGVK  406 (929)
T ss_pred             hhhhhcCHHHHHHHHHhcChhhhcccccccCCchhhhHHHHhccHHHHHHHHHcCCceeec
Confidence            99999999999999999998876   45999999999999999999999999999999653


No 31 
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.93  E-value=3e-25  Score=160.91  Aligned_cols=142  Identities=16%  Similarity=0.184  Sum_probs=95.2

Q ss_pred             ccCCCccCCCcccHHHHHHHHHh---CCHHHHHHHHHcCCCC-CCCCCCCccHHHHHHhC--CCHHHHHHHHhcCCCCCC
Q 031662           10 NRTQTTETSSPENIDALLAAARY---DDIEDVISLASAGVPL-DSKDSQGRTALHMASAN--GHLGIVEYLIGRGVDINA   83 (155)
Q Consensus        10 ~~~~~~~~~~~~~~~~l~~A~~~---~~~~~v~~ll~~~~~~-~~~~~~~~~~l~~a~~~--~~~~~~~~ll~~~~~~~~   83 (155)
                      +.|++++..+..|.|||+.|+..   ++.+++++|+++|+++ +..+..|.||||+|+..  ++.+++++|+++|++++.
T Consensus        96 ~~Gadin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~  175 (494)
T PHA02989         96 KFGADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNLFE  175 (494)
T ss_pred             HCCCCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCccc
Confidence            44555556666777777776654   5677777777777777 66777777777776543  466777777777777766


Q ss_pred             -CCCCCCCHHHHHHhcC----cHHHHHHHHHcCCCCc--------------------------------------ccCCC
Q 031662           84 -SNEEKNTPLHYACLNG----HTEVAKKLVLSGANIS--------------------------------------VLNSH  120 (155)
Q Consensus        84 -~~~~~~t~l~~a~~~~----~~~~~~~Ll~~~~~~~--------------------------------------~~~~~  120 (155)
                       .+..|.||+|.|+..+    +.+++++|+++|++++                                      .+|..
T Consensus       176 ~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~~advn~~d~~  255 (494)
T PHA02989        176 KTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILKYIKINKKDKK  255 (494)
T ss_pred             cccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHhCCCCCCCCCC
Confidence             4566777777665443    6666777666665543                                      23445


Q ss_pred             CCCHHHHHHHCCCHHHHHHHHHHHhhcccCC
Q 031662          121 EQTPIDEALSRGKMDIIDAINTAVAQLELGG  151 (155)
Q Consensus       121 ~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~  151 (155)
                      |+||||+|+..|+.+++++|+++|++++..+
T Consensus       256 G~TpL~~Aa~~~~~~~v~~LL~~Gadin~~d  286 (494)
T PHA02989        256 GFNPLLISAKVDNYEAFNYLLKLGDDIYNVS  286 (494)
T ss_pred             CCCHHHHHHHhcCHHHHHHHHHcCCCccccC
Confidence            6777777777777777777777777776544


No 32 
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.93  E-value=5.5e-25  Score=148.59  Aligned_cols=114  Identities=22%  Similarity=0.257  Sum_probs=103.9

Q ss_pred             HHHHHHHHHhCCHHHHHHHHHcCCCCCCCC----CCCccHHHHHHhCCCHHHHHHHHhcCCCCCCC-CCCCCCHHHHHHh
Q 031662           23 IDALLAAARYDDIEDVISLASAGVPLDSKD----SQGRTALHMASANGHLGIVEYLIGRGVDINAS-NEEKNTPLHYACL   97 (155)
Q Consensus        23 ~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~----~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~-~~~~~t~l~~a~~   97 (155)
                      .++|+.|++.|+.+++++|+++|++++.++    ..|.||||+|+..++.+++++|+++|++++.+ +..|.||||+|+.
T Consensus        34 ~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpLh~Aa~  113 (300)
T PHA02884         34 ANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPLYISVL  113 (300)
T ss_pred             CHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHHHHHHH
Confidence            356788888999999999999999999864    57999999999999999999999999999986 4689999999999


Q ss_pred             cCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHH
Q 031662           98 NGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDI  136 (155)
Q Consensus        98 ~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~  136 (155)
                      .++.+++++|++.|++++.++..|.||+++|+..++.++
T Consensus       114 ~~~~eivklLL~~GAdin~kd~~G~TpL~~A~~~~~~~~  152 (300)
T PHA02884        114 HGCLKCLEILLSYGADINIQTNDMVTPIELALMICNNFL  152 (300)
T ss_pred             cCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCChhH
Confidence            999999999999999999999999999999998654433


No 33 
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.93  E-value=1.2e-25  Score=141.65  Aligned_cols=138  Identities=25%  Similarity=0.277  Sum_probs=123.3

Q ss_pred             CCccCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHH
Q 031662           13 QTTETSSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPL   92 (155)
Q Consensus        13 ~~~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l   92 (155)
                      ..++..+..|.|||.||+.+|++..|++|++.|++++.......++|..|++.|..+++++|+.++.++|..|.+|-|||
T Consensus       151 n~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNvyDwNGgTpL  230 (296)
T KOG0502|consen  151 NKVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTREVDVNVYDWNGGTPL  230 (296)
T ss_pred             ccccCccccCchHhHHHHhcCchHHHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcceeccCCCcee
Confidence            44567788999999999999999999999999999988888889999999999999999999999999999999999999


Q ss_pred             HHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccCC
Q 031662           93 HYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELGG  151 (155)
Q Consensus        93 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~  151 (155)
                      .+|++.++.+|++.|++.|++++..+..|.+++..|+..|+. +|+.++++.+....++
T Consensus       231 lyAvrgnhvkcve~Ll~sGAd~t~e~dsGy~~mdlAValGyr-~Vqqvie~h~lkl~Q~  288 (296)
T KOG0502|consen  231 LYAVRGNHVKCVESLLNSGADVTQEDDSGYWIMDLAVALGYR-IVQQVIEKHALKLCQD  288 (296)
T ss_pred             eeeecCChHHHHHHHHhcCCCcccccccCCcHHHHHHHhhhH-HHHHHHHHHHHHHhhc
Confidence            999999999999999999999999999999999999999988 7777777777766554


No 34 
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.93  E-value=6.6e-25  Score=164.49  Aligned_cols=140  Identities=24%  Similarity=0.349  Sum_probs=111.5

Q ss_pred             CCccCCCcccHHHHHHHHHh-CCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCH
Q 031662           13 QTTETSSPENIDALLAAARY-DDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTP   91 (155)
Q Consensus        13 ~~~~~~~~~~~~~l~~A~~~-~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~   91 (155)
                      .++...+..|.||||.|+.. ++.++++.|++.|++++.++..|.||||+|+..++.+++++|+++|++++..+..|.||
T Consensus       332 adin~~d~~g~TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~~~~~g~T~  411 (682)
T PHA02876        332 ADVNAADRLYITPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTA  411 (682)
T ss_pred             CCCCCcccCCCcHHHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCch
Confidence            34445566677777777764 46777777888888888888888888888888888888888888888888888888888


Q ss_pred             HHHHHhcCc-HHHHHHHHHcCCCCcccCCCCCCHHHHHHHCC-CHHHHHHHHHHHhhcccCCC
Q 031662           92 LHYACLNGH-TEVAKKLVLSGANISVLNSHEQTPIDEALSRG-KMDIIDAINTAVAQLELGGF  152 (155)
Q Consensus        92 l~~a~~~~~-~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~-~~~~~~~L~~~g~~~~~~~~  152 (155)
                      ||+|+..++ ..++++|++.|++++.+|..|+||||+|+..+ +.+++++|+++|++++..+.
T Consensus       412 Lh~A~~~~~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~~~~~iv~lLl~~Gad~n~~d~  474 (682)
T PHA02876        412 LHFALCGTNPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKNCKLDVIEMLLDNGADVNAINI  474 (682)
T ss_pred             HHHHHHcCCHHHHHHHHHhCCCCCCcCCCCCChHHHHHHHhCCcHHHHHHHHHCCCCCCCCCC
Confidence            888876655 45678888889999999999999999999876 68999999999999876543


No 35 
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.93  E-value=9.7e-25  Score=158.30  Aligned_cols=138  Identities=19%  Similarity=0.255  Sum_probs=118.4

Q ss_pred             ccCCCc-cCCCcccHHHHHHHHHh--CCHHHHHHHHHcCCCCCC-CCCCCccHHHHHHhCC----CHHHHHHHHhcCCCC
Q 031662           10 NRTQTT-ETSSPENIDALLAAARY--DDIEDVISLASAGVPLDS-KDSQGRTALHMASANG----HLGIVEYLIGRGVDI   81 (155)
Q Consensus        10 ~~~~~~-~~~~~~~~~~l~~A~~~--~~~~~v~~ll~~~~~~~~-~~~~~~~~l~~a~~~~----~~~~~~~ll~~~~~~   81 (155)
                      +.|.++ ...+..|.||||+|+..  ++.+++++|++.|++++. .+..|.||||+|+..+    +.+++++|++.|+++
T Consensus       132 ~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~v  211 (494)
T PHA02989        132 SKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNI  211 (494)
T ss_pred             HCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCc
Confidence            344555 56678899999998764  688999999999999987 5778999999987654    788999998888765


Q ss_pred             C--------------------------------------CCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcccCCCCCC
Q 031662           82 N--------------------------------------ASNEEKNTPLHYACLNGHTEVAKKLVLSGANISVLNSHEQT  123 (155)
Q Consensus        82 ~--------------------------------------~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t  123 (155)
                      +                                      .+|..|.||||+|+..++.+++++|++.|++++.++..|+|
T Consensus       212 n~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin~~d~~G~T  291 (494)
T PHA02989        212 ETNNNGSESVLESFLDNNKILSKKEFKVLNFILKYIKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDT  291 (494)
T ss_pred             cccCCccccHHHHHHHhchhhcccchHHHHHHHhCCCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCCccccCCCCCC
Confidence            4                                      34556999999999999999999999999999999999999


Q ss_pred             HHHHHHHCCCHHHHHHHHHHHhhc
Q 031662          124 PIDEALSRGKMDIIDAINTAVAQL  147 (155)
Q Consensus       124 ~l~~a~~~~~~~~~~~L~~~g~~~  147 (155)
                      ||++|+..|+.+++++|++.+...
T Consensus       292 pL~~A~~~~~~~iv~~LL~~~p~~  315 (494)
T PHA02989        292 VLTYAIKHGNIDMLNRILQLKPGK  315 (494)
T ss_pred             HHHHHHHcCCHHHHHHHHhcCCCh
Confidence            999999999999999999887543


No 36 
>PHA02798 ankyrin-like protein; Provisional
Probab=99.93  E-value=9.3e-25  Score=158.23  Aligned_cols=140  Identities=21%  Similarity=0.230  Sum_probs=95.5

Q ss_pred             ccCCCccCCCcccHHHHHHHHHh-----CCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCC---CHHHHHHHHhcCCCC
Q 031662           10 NRTQTTETSSPENIDALLAAARY-----DDIEDVISLASAGVPLDSKDSQGRTALHMASANG---HLGIVEYLIGRGVDI   81 (155)
Q Consensus        10 ~~~~~~~~~~~~~~~~l~~A~~~-----~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~---~~~~~~~ll~~~~~~   81 (155)
                      +.|.+++..+..|.||||.|+..     +..+++++|++.|+++|.++..|.||||+|+..+   +.+++++|+++|+++
T Consensus        59 ~~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadv  138 (489)
T PHA02798         59 NLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKKNSDGETPLYCLLSNGYINNLEILLFMIENGADT  138 (489)
T ss_pred             HCCCCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCc
Confidence            34445555556677777776643     5567777777777777777777777777777654   567777777777777


Q ss_pred             CCCCCCCCCHHHHHHhcCc---HHHHHHHHHcCCCCcccC-CCCCCHHHHHHHC----CCHHHHHHHHHHHhhccc
Q 031662           82 NASNEEKNTPLHYACLNGH---TEVAKKLVLSGANISVLN-SHEQTPIDEALSR----GKMDIIDAINTAVAQLEL  149 (155)
Q Consensus        82 ~~~~~~~~t~l~~a~~~~~---~~~~~~Ll~~~~~~~~~~-~~~~t~l~~a~~~----~~~~~~~~L~~~g~~~~~  149 (155)
                      +.+|..|.||||+|+..++   .+++++|++.|++++..+ ..+.||+|.++..    ++.+++++|+++|++++.
T Consensus       139 n~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~  214 (489)
T PHA02798        139 TLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINK  214 (489)
T ss_pred             cccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCccc
Confidence            7777777777777777666   677777777777776653 3566777766543    357777777777776654


No 37 
>PHA02946 ankyin-like protein; Provisional
Probab=99.92  E-value=2.8e-24  Score=153.63  Aligned_cols=138  Identities=14%  Similarity=0.205  Sum_probs=76.2

Q ss_pred             cCCCccCCCcccHHHHHHHHHhC--CHHHHHHHHHcCCCCCC-CCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCC
Q 031662           11 RTQTTETSSPENIDALLAAARYD--DIEDVISLASAGVPLDS-KDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEE   87 (155)
Q Consensus        11 ~~~~~~~~~~~~~~~l~~A~~~~--~~~~v~~ll~~~~~~~~-~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~   87 (155)
                      .+.++...+..|.||||+|+..+  ..+++++|++.|++++. .+..|.|||| |+..++.+++++|++.|++++.+|..
T Consensus        94 ~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~-aa~~~~~~vv~~Ll~~gad~~~~d~~  172 (446)
T PHA02946         94 HGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEEGCGPLL-ACTDPSERVFKKIMSIGFEARIVDKF  172 (446)
T ss_pred             CcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccCCCCCcHHH-HHHCCChHHHHHHHhccccccccCCC
Confidence            34444455566667777666544  35666666666666653 3555566664 34445555555555555555555555


Q ss_pred             CCCHHHHHHhcCc--HHHHHHHHHcCCCCcccCCCCCCHHHHHHHCC--CHHHHHHHHHHHhhcccC
Q 031662           88 KNTPLHYACLNGH--TEVAKKLVLSGANISVLNSHEQTPIDEALSRG--KMDIIDAINTAVAQLELG  150 (155)
Q Consensus        88 ~~t~l~~a~~~~~--~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~--~~~~~~~L~~~g~~~~~~  150 (155)
                      |.||||+|+..++  .+++++|+++|++++.+|..|.||||+|+..+  +.+++++|+. |++++..
T Consensus       173 G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d~~G~TpLH~Aa~~~~~~~~iv~lLl~-gadin~~  238 (446)
T PHA02946        173 GKNHIHRHLMSDNPKASTISWMMKLGISPSKPDHDGNTPLHIVCSKTVKNVDIINLLLP-STDVNKQ  238 (446)
T ss_pred             CCCHHHHHHHhcCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCCcHHHHHHHHc-CCCCCCC
Confidence            5555555544332  35555555555555555555555555555543  4555555553 4555443


No 38 
>PHA02795 ankyrin-like protein; Provisional
Probab=99.92  E-value=4.7e-24  Score=149.51  Aligned_cols=133  Identities=16%  Similarity=0.090  Sum_probs=119.1

Q ss_pred             CCcccHHHHHHHHH--hCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCC------CCCC
Q 031662           18 SSPENIDALLAAAR--YDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASN------EEKN   89 (155)
Q Consensus        18 ~~~~~~~~l~~A~~--~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~------~~~~   89 (155)
                      ......|+||+++.  .|+.+++++|+++|++++..+  +.||+|.|+..++.+++++|+++|++.....      ..+.
T Consensus       112 ~~~~~~~~L~~~~~n~~n~~eiV~~LI~~GADIn~~~--~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~  189 (437)
T PHA02795        112 NCNSVQDLLLYYLSNAYVEIDIVDFMVDHGAVIYKIE--CLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQY  189 (437)
T ss_pred             ccccccHHHHHHHHhcCCCHHHHHHHHHCCCCCCCCC--CCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhcc
Confidence            45568999999999  899999999999999998754  4799999999999999999999997543221      3477


Q ss_pred             CHHHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccCCC
Q 031662           90 TPLHYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELGGF  152 (155)
Q Consensus        90 t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~  152 (155)
                      +++|.+...++.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus       190 t~l~~a~~~~~~eIve~LIs~GADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d~  252 (437)
T PHA02795        190 TRGFLVDEPTVLEIYKLCIPYIEDINQLDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAVMS  252 (437)
T ss_pred             chhHHHHhcCHHHHHHHHHhCcCCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCC
Confidence            899999999999999999999999999999999999999999999999999999999987653


No 39 
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.92  E-value=5.6e-24  Score=159.49  Aligned_cols=137  Identities=26%  Similarity=0.313  Sum_probs=97.9

Q ss_pred             CCccCCCcccHHHHHHHHHhCCH-HHHHHHHHcCCCCCCCCCCCccHHHHHHhCC-CHHHHHHHHhcCCCCCCCCCCCCC
Q 031662           13 QTTETSSPENIDALLAAARYDDI-EDVISLASAGVPLDSKDSQGRTALHMASANG-HLGIVEYLIGRGVDINASNEEKNT   90 (155)
Q Consensus        13 ~~~~~~~~~~~~~l~~A~~~~~~-~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~-~~~~~~~ll~~~~~~~~~~~~~~t   90 (155)
                      ......+..|.||||.|+..++. +++++|++.|++++..+..|.||||+|+..+ +.++++.|+..|++++..+..|.|
T Consensus       264 ~~vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadin~~d~~g~T  343 (682)
T PHA02876        264 FSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGADVNAADRLYIT  343 (682)
T ss_pred             CCCCCCCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCCCCcccCCCc
Confidence            34444556677777777777775 4677777777777777777777777777776 467777777777777777777777


Q ss_pred             HHHHHHhc-CcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhccc
Q 031662           91 PLHYACLN-GHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLEL  149 (155)
Q Consensus        91 ~l~~a~~~-~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~  149 (155)
                      |||+|+.. ++.+++.+|++.|++++.+|..|.||||+|+..++.+++++|+++|++++.
T Consensus       344 pLh~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~  403 (682)
T PHA02876        344 PLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEA  403 (682)
T ss_pred             HHHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCccc
Confidence            77777664 356667777777777777777777777777777777777777777776654


No 40 
>PHA02917 ankyrin-like protein; Provisional
Probab=99.92  E-value=1e-23  Score=156.25  Aligned_cols=141  Identities=13%  Similarity=0.120  Sum_probs=111.2

Q ss_pred             cCCCccCCCcccHHHHHHHHHh---CCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCC---------------------
Q 031662           11 RTQTTETSSPENIDALLAAARY---DDIEDVISLASAGVPLDSKDSQGRTALHMASANG---------------------   66 (155)
Q Consensus        11 ~~~~~~~~~~~~~~~l~~A~~~---~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~---------------------   66 (155)
                      .+......+..|.||||+|++.   |+.+++++|++.|++++..+..|.||||+|+..+                     
T Consensus        21 ~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n~  100 (661)
T PHA02917         21 DRDPNDTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYSNI  100 (661)
T ss_pred             ccCcccccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCCCC
Confidence            4444566678899999998665   7899999999999999999999999999887654                     


Q ss_pred             --------------CHHHHHHHHhcCCCCCCCCCCCCCHHHHHH--hcCcHHHHHHHHHcCCCCcccCC---CC------
Q 031662           67 --------------HLGIVEYLIGRGVDINASNEEKNTPLHYAC--LNGHTEVAKKLVLSGANISVLNS---HE------  121 (155)
Q Consensus        67 --------------~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~--~~~~~~~~~~Ll~~~~~~~~~~~---~~------  121 (155)
                                    +.+++++|+++|++++.+|..|+|||+.++  ..++.+++++|+++|++++.++.   .|      
T Consensus       101 ~~~~~~~~~a~~~~~~e~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~  180 (661)
T PHA02917        101 NDFNIFSYMKSKNVDVDLIKVLVEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAYDDY  180 (661)
T ss_pred             CCcchHHHHHhhcCCHHHHHHHHHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCccccccccccccccccc
Confidence                          346677788888888888888888888543  46788888888888888876543   23      


Q ss_pred             -----CCHHHHHHH-----------CCCHHHHHHHHHHHhhcccCC
Q 031662          122 -----QTPIDEALS-----------RGKMDIIDAINTAVAQLELGG  151 (155)
Q Consensus       122 -----~t~l~~a~~-----------~~~~~~~~~L~~~g~~~~~~~  151 (155)
                           .||||+|+.           .++.+++++|+++|++++..+
T Consensus       181 ~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d  226 (661)
T PHA02917        181 QPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSID  226 (661)
T ss_pred             cccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcccCC
Confidence                 488888875           457888888888888887654


No 41 
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.91  E-value=2.5e-24  Score=163.28  Aligned_cols=131  Identities=27%  Similarity=0.458  Sum_probs=110.0

Q ss_pred             cCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHH
Q 031662           16 ETSSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYA   95 (155)
Q Consensus        16 ~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a   95 (155)
                      ......+.+++|.|...+.+..++.++++|.+++.++..+.||||+|+.+|+.++|++|+++|++++.+++.|+||||.|
T Consensus       501 ~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~A  580 (1143)
T KOG4177|consen  501 NLDAKKGLTPLHLAADEDTVKVAKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQA  580 (1143)
T ss_pred             CccchhccchhhhhhhhhhHHHHHHHhhcCCceehhcccccchHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHH
Confidence            33444555555555555555555555666666667778889999999999999999999999999999999999999999


Q ss_pred             HhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhh
Q 031662           96 CLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQ  146 (155)
Q Consensus        96 ~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~  146 (155)
                      +..|+.+++.+|+++|+++|..+.+|.|||++|++.|+.+++++|+..+.+
T Consensus       581 a~~G~~~i~~LLlk~GA~vna~d~~g~TpL~iA~~lg~~~~~k~l~~~~~~  631 (1143)
T KOG4177|consen  581 AQQGHNDIAELLLKHGASVNAADLDGFTPLHIAVRLGYLSVVKLLKVVTAT  631 (1143)
T ss_pred             HHcChHHHHHHHHHcCCCCCcccccCcchhHHHHHhcccchhhHHHhccCc
Confidence            999999999999999999999999999999999999999999999998887


No 42 
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.91  E-value=9e-24  Score=153.59  Aligned_cols=138  Identities=25%  Similarity=0.375  Sum_probs=124.3

Q ss_pred             cCCCccCCCcccHHHHHHHHHhCCHHHHHHHHHcCCC---------------CCCCCCCCccHHHHHHhCCCHHHHHHHH
Q 031662           11 RTQTTETSSPENIDALLAAARYDDIEDVISLASAGVP---------------LDSKDSQGRTALHMASANGHLGIVEYLI   75 (155)
Q Consensus        11 ~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~---------------~~~~~~~~~~~l~~a~~~~~~~~~~~ll   75 (155)
                      ++..++..+..+.+|||.|++.|++++++.+++.+..               ++..|.+|.||||+|++.|+.++++.|+
T Consensus       214 r~~~in~~~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll  293 (929)
T KOG0510|consen  214 RQTHINFDNNEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLL  293 (929)
T ss_pred             hhcccccccCCCCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHH
Confidence            5566667778899999999999999999999998743               2456889999999999999999999999


Q ss_pred             hcCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHH-cC-CCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcc
Q 031662           76 GRGVDINASNEEKNTPLHYACLNGHTEVAKKLVL-SG-ANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLE  148 (155)
Q Consensus        76 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~-~~-~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~  148 (155)
                      ..|++++.++.++.||||.|+..|+++.++-|++ .+ ...+..|..|.||||+|++.||..++++|++.|+.+.
T Consensus       294 ~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~  368 (929)
T KOG0510|consen  294 GFGASINSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALFL  368 (929)
T ss_pred             HcCCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHHhcChhhh
Confidence            9999999999999999999999999999999998 55 3457789999999999999999999999999999875


No 43 
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.91  E-value=4.3e-24  Score=161.99  Aligned_cols=150  Identities=22%  Similarity=0.304  Sum_probs=140.8

Q ss_pred             CCCcccccCCCccCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCC
Q 031662            4 DADPSINRTQTTETSSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINA   83 (155)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~   83 (155)
                      -+.+.++.+..++.....|.||||+|+..|+.+.++.+++.++..+.....+.+++|.+...+....++.++++|+.++.
T Consensus       456 ~~~~l~~~g~~~n~~s~~G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v~~  535 (1143)
T KOG4177|consen  456 IARLLLQYGADPNAVSKQGFTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVAKILLEHGANVDL  535 (1143)
T ss_pred             hhhhHhhcCCCcchhccccCcchhhhhccCCchHHHHhhhcCCccCccchhccchhhhhhhhhhHHHHHHHhhcCCceeh
Confidence            35677788888888999999999999999999999999999988888888899999999999999999999999999999


Q ss_pred             CCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccCCCc
Q 031662           84 SNEEKNTPLHYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELGGFT  153 (155)
Q Consensus        84 ~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~  153 (155)
                      ++..+.||||.|+..|+.+++++|+++|++++.++..|+||||.|+..|+.+|+++|+++|++++..+..
T Consensus       536 ~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna~d~~  605 (1143)
T KOG4177|consen  536 RTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASVNAADLD  605 (1143)
T ss_pred             hcccccchHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcChHHHHHHHHHcCCCCCccccc
Confidence            9999999999999999999999999999999999999999999999999999999999999999876654


No 44 
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.91  E-value=4.6e-24  Score=134.56  Aligned_cols=138  Identities=20%  Similarity=0.264  Sum_probs=122.8

Q ss_pred             CCCccCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCH
Q 031662           12 TQTTETSSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTP   91 (155)
Q Consensus        12 ~~~~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~   91 (155)
                      +...+..+.-+++|+.+++.+.+++.+..+..+  .+|..|..|.|||++|+.+|++++++||++.|++++...+...++
T Consensus       119 ~~rgnevs~~p~s~~slsVhql~L~~~~~~~~n--~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~resA  196 (296)
T KOG0502|consen  119 GARGNEVSLMPWSPLSLSVHQLHLDVVDLLVNN--KVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKYRESA  196 (296)
T ss_pred             cccCCccccccCChhhHHHHHHHHHHHHHHhhc--cccCccccCchHhHHHHhcCchHHHHHHHHcCCChhhhhhhhhhh
Confidence            344455566778888888888877777665554  456789999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccCC
Q 031662           92 LHYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELGG  151 (155)
Q Consensus        92 l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~  151 (155)
                      |.+|+..|.++++++|++++.++|..|.+|.|||-+|++-++.+|++.|++.|+++....
T Consensus       197 LsLAt~ggytdiV~lLL~r~vdVNvyDwNGgTpLlyAvrgnhvkcve~Ll~sGAd~t~e~  256 (296)
T KOG0502|consen  197 LSLATRGGYTDIVELLLTREVDVNVYDWNGGTPLLYAVRGNHVKCVESLLNSGADVTQED  256 (296)
T ss_pred             HhHHhcCChHHHHHHHHhcCCCcceeccCCCceeeeeecCChHHHHHHHHhcCCCccccc
Confidence            999999999999999999999999999999999999999999999999999999997644


No 45 
>PHA02917 ankyrin-like protein; Provisional
Probab=99.91  E-value=3.6e-23  Score=153.39  Aligned_cols=124  Identities=18%  Similarity=0.187  Sum_probs=106.8

Q ss_pred             HHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHH--hCCCHHHHHHHHhcCCCCCCCCC---CC----------
Q 031662           24 DALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMAS--ANGHLGIVEYLIGRGVDINASNE---EK----------   88 (155)
Q Consensus        24 ~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~--~~~~~~~~~~ll~~~~~~~~~~~---~~----------   88 (155)
                      .+++.|+..++++++++|+++|++++.+|..|.||||.++  ..++.+++++|+++|++++.+|.   .|          
T Consensus       105 ~~~~~a~~~~~~e~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~~~~~  184 (661)
T PHA02917        105 IFSYMKSKNVDVDLIKVLVEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAYDDYQPRN  184 (661)
T ss_pred             hHHHHHhhcCCHHHHHHHHHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCccccccccccccccccccccc
Confidence            4455667777889999999999999999999999999654  56899999999999999986553   23          


Q ss_pred             -CCHHHHHHh-----------cCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCH--HHHHHHHHHHhhcc
Q 031662           89 -NTPLHYACL-----------NGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKM--DIIDAINTAVAQLE  148 (155)
Q Consensus        89 -~t~l~~a~~-----------~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~--~~~~~L~~~g~~~~  148 (155)
                       .||||+|+.           .++.+++++|+++|++++.+|.+|.||||+|+..|+.  +++++|++ |++..
T Consensus       185 ~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d~~G~TpLh~A~~~g~~~~eivk~Li~-g~d~~  257 (661)
T PHA02917        185 CGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSIDKNYCTALQYYIKSSHIDIDIVKLLMK-GIDNT  257 (661)
T ss_pred             cccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcccCCCCCCcHHHHHHHcCCCcHHHHHHHHh-CCccc
Confidence             599999986           4588999999999999999999999999999999985  79999975 77654


No 46 
>PHA02730 ankyrin-like protein; Provisional
Probab=99.91  E-value=3.7e-23  Score=151.28  Aligned_cols=138  Identities=18%  Similarity=0.208  Sum_probs=117.8

Q ss_pred             cCCCccCCCcccHHHHHHHHHhCC----HHHHHHHHHcCC--CCCCCCCCCccHHHH---HHhCC---------CHHHHH
Q 031662           11 RTQTTETSSPENIDALLAAARYDD----IEDVISLASAGV--PLDSKDSQGRTALHM---ASANG---------HLGIVE   72 (155)
Q Consensus        11 ~~~~~~~~~~~~~~~l~~A~~~~~----~~~v~~ll~~~~--~~~~~~~~~~~~l~~---a~~~~---------~~~~~~   72 (155)
                      .|+++... ..|.||||+|+..++    .+++++|+++|+  +++.++..|.||||.   |...+         ..++++
T Consensus       368 ~GAdIN~k-~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk  446 (672)
T PHA02730        368 NGATMDKT-TDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINHVSNNGRLCMYGLILSRFNNCGYHCYETILIDVFD  446 (672)
T ss_pred             CCCCCCcC-CCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCccccccccCCCchHhHHHHHHhccccccccchhHHHHHH
Confidence            34444443 578899999998874    899999999987  688889999999984   33222         235699


Q ss_pred             HHHhcCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcccCC-CCCCHHHHHHH--CCCHHHHHHHHHHHhhccc
Q 031662           73 YLIGRGVDINASNEEKNTPLHYACLNGHTEVAKKLVLSGANISVLNS-HEQTPIDEALS--RGKMDIIDAINTAVAQLEL  149 (155)
Q Consensus        73 ~ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~-~~~t~l~~a~~--~~~~~~~~~L~~~g~~~~~  149 (155)
                      +|+.+|++++.+|..|.||||+|+..++.+++++|+++|++++..+. .|.||++.|+.  .++.+++++|+++|++++.
T Consensus       447 ~LIs~GADINakD~~G~TPLh~Aa~~~~~eive~LI~~GAdIN~~d~~~g~TaL~~Aa~~~~~~~eIv~~LLs~ga~i~~  526 (672)
T PHA02730        447 ILSKYMDDIDMIDNENKTLLYYAVDVNNIQFARRLLEYGASVNTTSRSIINTAIQKSSYRRENKTKLVDLLLSYHPTLET  526 (672)
T ss_pred             HHHhcccchhccCCCCCCHHHHHHHhCCHHHHHHHHHCCCCCCCCCCcCCcCHHHHHHHhhcCcHHHHHHHHHcCCCHHH
Confidence            99999999999999999999999999999999999999999999997 58999999987  4789999999999988753


No 47 
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.90  E-value=8.4e-23  Score=155.50  Aligned_cols=132  Identities=20%  Similarity=0.215  Sum_probs=122.3

Q ss_pred             CcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhc
Q 031662           19 SPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACLN   98 (155)
Q Consensus        19 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~   98 (155)
                      +....++|+.|+..|+.++++.|++.|.+++..|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..
T Consensus       522 ~~~~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~  601 (823)
T PLN03192        522 DPNMASNLLTVASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISA  601 (823)
T ss_pred             CccchhHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHh
Confidence            34567889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccCCC
Q 031662           99 GHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELGGF  152 (155)
Q Consensus        99 ~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~  152 (155)
                      |+.+++++|++.++..+.  ..+.++|+.|+..|+.+++++|+++|++++..+.
T Consensus       602 g~~~iv~~L~~~~~~~~~--~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~  653 (823)
T PLN03192        602 KHHKIFRILYHFASISDP--HAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDH  653 (823)
T ss_pred             CCHHHHHHHHhcCcccCc--ccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCC
Confidence            999999999988766553  4577999999999999999999999999987654


No 48 
>PF12796 Ank_2:  Ankyrin repeats (3 copies);  InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.90  E-value=1e-22  Score=115.70  Aligned_cols=88  Identities=40%  Similarity=0.605  Sum_probs=50.7

Q ss_pred             HHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCcHHHHH
Q 031662           26 LLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACLNGHTEVAK  105 (155)
Q Consensus        26 l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~  105 (155)
                      ||+|++.|+++++++|++.+.+++.    |.+|||+|+..++.+++++|++.|++++.++..|.||||+|+..++.++++
T Consensus         1 L~~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~   76 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIVK   76 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHHH
T ss_pred             CHHHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHHH
Confidence            4556666666666666665555443    455666666666666666666666666555555666666666666666666


Q ss_pred             HHHHcCCCCccc
Q 031662          106 KLVLSGANISVL  117 (155)
Q Consensus       106 ~Ll~~~~~~~~~  117 (155)
                      +|+++|++++.+
T Consensus        77 ~Ll~~g~~~~~~   88 (89)
T PF12796_consen   77 LLLEHGADVNIR   88 (89)
T ss_dssp             HHHHTTT-TTSS
T ss_pred             HHHHcCCCCCCc
Confidence            666665555544


No 49 
>PF12796 Ank_2:  Ankyrin repeats (3 copies);  InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.90  E-value=8.6e-23  Score=116.01  Aligned_cols=89  Identities=35%  Similarity=0.599  Sum_probs=82.4

Q ss_pred             HHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHH
Q 031662           59 LHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIID  138 (155)
Q Consensus        59 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~  138 (155)
                      ||+|+..++.+++++|++.+.+++.    |.||+|+|+..|+.+++++|+++|++++.++.+|+|||++|+..|+.++++
T Consensus         1 L~~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~   76 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIVK   76 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHHH
T ss_pred             CHHHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHHH
Confidence            7999999999999999999888776    889999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhcccCC
Q 031662          139 AINTAVAQLELGG  151 (155)
Q Consensus       139 ~L~~~g~~~~~~~  151 (155)
                      +|+++|++++..+
T Consensus        77 ~Ll~~g~~~~~~n   89 (89)
T PF12796_consen   77 LLLEHGADVNIRN   89 (89)
T ss_dssp             HHHHTTT-TTSS-
T ss_pred             HHHHcCCCCCCcC
Confidence            9999999998764


No 50 
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.89  E-value=6e-23  Score=134.62  Aligned_cols=117  Identities=36%  Similarity=0.546  Sum_probs=110.6

Q ss_pred             CCccCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHH
Q 031662           13 QTTETSSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPL   92 (155)
Q Consensus        13 ~~~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l   92 (155)
                      .+.+..+..|.+|||+|++.|+..+++.|+++|+.+|..+....||||.|+..|+.++++.|++..+++|+.+..|+|||
T Consensus        25 hdln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvnavnehgntpl  104 (448)
T KOG0195|consen   25 HDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVNEHGNTPL  104 (448)
T ss_pred             cccccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccchhhccCCCch
Confidence            34456678999999999999999999999999999999888889999999999999999999999999999999999999


Q ss_pred             HHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Q 031662           93 HYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEAL  129 (155)
Q Consensus        93 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~  129 (155)
                      |+||..|.-.+++-|+..|+.++..+.+|.||++.|.
T Consensus       105 hyacfwgydqiaedli~~ga~v~icnk~g~tpldkak  141 (448)
T KOG0195|consen  105 HYACFWGYDQIAEDLISCGAAVNICNKKGMTPLDKAK  141 (448)
T ss_pred             hhhhhhcHHHHHHHHHhccceeeecccCCCCchhhhc
Confidence            9999999999999999999999999999999999764


No 51 
>cd00204 ANK ankyrin repeats;  ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.89  E-value=1.6e-21  Score=116.98  Aligned_cols=123  Identities=35%  Similarity=0.587  Sum_probs=116.8

Q ss_pred             CcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhc
Q 031662           19 SPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACLN   98 (155)
Q Consensus        19 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~   98 (155)
                      +..|.|||+.|++.++.++++++++.+.+.+..+..|.+++|+|+..++.+++++++..+..++..+..+.||+|+|+..
T Consensus         4 ~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~~~   83 (126)
T cd00204           4 DEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAARN   83 (126)
T ss_pred             CcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHc
Confidence            46788999999999999999999999998888899999999999999999999999999988888999999999999999


Q ss_pred             CcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHH
Q 031662           99 GHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAIN  141 (155)
Q Consensus        99 ~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~  141 (155)
                      ++.+++++|++++.+++..+..+.||++.|...++.+++++|+
T Consensus        84 ~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll  126 (126)
T cd00204          84 GNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLLL  126 (126)
T ss_pred             CcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCHHHHHHhC
Confidence            9999999999999999999999999999999999999999874


No 52 
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.89  E-value=1.3e-22  Score=141.71  Aligned_cols=145  Identities=30%  Similarity=0.416  Sum_probs=130.4

Q ss_pred             ccccCCCccCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCC-----
Q 031662            8 SINRTQTTETSSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDIN-----   82 (155)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~-----   82 (155)
                      .+..+...+..+.+|.|+||.+|.-.+.++|++++++|.++|..|..+|||+|.|+..++..++++++.+|+++.     
T Consensus        59 ll~~ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~~i~~~li~~gA~~~avNsd  138 (527)
T KOG0505|consen   59 LLNRGASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGYLNIVEYLIQHGANLLAVNSD  138 (527)
T ss_pred             HhccCCCccccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhcccccHHHHHHHHHhhhhhhhccCC
Confidence            344556667788999999999999999999999999999999999999999999999999999999999876621     


Q ss_pred             ------------------------------------------------------CCCCCCCCHHHHHHhcCcHHHHHHHH
Q 031662           83 ------------------------------------------------------ASNEEKNTPLHYACLNGHTEVAKKLV  108 (155)
Q Consensus        83 ------------------------------------------------------~~~~~~~t~l~~a~~~~~~~~~~~Ll  108 (155)
                                                                            .+...|.|.+|.|+..|..++.++|+
T Consensus       139 g~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl  218 (527)
T KOG0505|consen  139 GNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAANGYTEVAALLL  218 (527)
T ss_pred             CCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhhhHHHHHHHHH
Confidence                                                                  22234789999999999999999999


Q ss_pred             HcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccCCC
Q 031662          109 LSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELGGF  152 (155)
Q Consensus       109 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~  152 (155)
                      +.|.+++.+|.+||||||.|+..|..+++++|+++|++.+....
T Consensus       219 ~ag~~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d~~t~  262 (527)
T KOG0505|consen  219 QAGYSVNIKDYDGWTPLHAAAHWGQEDACELLVEHGADMDAKTK  262 (527)
T ss_pred             HhccCcccccccCCCcccHHHHhhhHhHHHHHHHhhcccchhhh
Confidence            99999999999999999999999999999999999999886544


No 53 
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.88  E-value=7e-22  Score=124.35  Aligned_cols=112  Identities=21%  Similarity=0.250  Sum_probs=100.5

Q ss_pred             cCCCccCCCcccHHHHHHHHHhCCHH---HHHHHHHcCCCCCCCC-CCCccHHHHHHhCCCHHHHHHHHh-cCCCCCCCC
Q 031662           11 RTQTTETSSPENIDALLAAARYDDIE---DVISLASAGVPLDSKD-SQGRTALHMASANGHLGIVEYLIG-RGVDINASN   85 (155)
Q Consensus        11 ~~~~~~~~~~~~~~~l~~A~~~~~~~---~v~~ll~~~~~~~~~~-~~~~~~l~~a~~~~~~~~~~~ll~-~~~~~~~~~   85 (155)
                      .+......+..|.||||+|+..|+.+   ++++|++.|++++.++ ..|.||||+|+..++.+++++|+. .|++++.++
T Consensus        46 ~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d  125 (166)
T PHA02743         46 DGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAIN  125 (166)
T ss_pred             cchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcC
Confidence            34445566788999999999998765   4899999999999998 589999999999999999999995 799999999


Q ss_pred             CCCCCHHHHHHhcCcHHHHHHHHHcCCCCcccCCCCC
Q 031662           86 EEKNTPLHYACLNGHTEVAKKLVLSGANISVLNSHEQ  122 (155)
Q Consensus        86 ~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~  122 (155)
                      ..|.||||+|+..++.+++++|+++|++++.++..|.
T Consensus       126 ~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~  162 (166)
T PHA02743        126 YQHETAYHIAYKMRDRRMMEILRANGAVCDDPLSIGL  162 (166)
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcccCCc
Confidence            9999999999999999999999999999998887764


No 54 
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.88  E-value=1.9e-22  Score=135.40  Aligned_cols=126  Identities=23%  Similarity=0.348  Sum_probs=82.3

Q ss_pred             CCCcccHHHHHHHHHhCCHHHHHHHHHcC-CCCCCCCCCCccHHHHHHhC-----CCHHHHHHHHhcCCCCCCC-CCCCC
Q 031662           17 TSSPENIDALLAAARYDDIEDVISLASAG-VPLDSKDSQGRTALHMASAN-----GHLGIVEYLIGRGVDINAS-NEEKN   89 (155)
Q Consensus        17 ~~~~~~~~~l~~A~~~~~~~~v~~ll~~~-~~~~~~~~~~~~~l~~a~~~-----~~~~~~~~ll~~~~~~~~~-~~~~~   89 (155)
                      .-+.+|.|+||+++.++++++|+.|++.| ++++.+++-|+||+++++..     .+..++..|++.| ++|++ ...|.
T Consensus       263 laDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg-nVNaKAsQ~gQ  341 (452)
T KOG0514|consen  263 LADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMG-DVNAKASQHGQ  341 (452)
T ss_pred             hhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhcc-Ccchhhhhhcc
Confidence            34567788888888888888888888876 67777777676666665533     2345555555543 45543 23566


Q ss_pred             CHHHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHH
Q 031662           90 TPLHYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTA  143 (155)
Q Consensus        90 t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~  143 (155)
                      |+|++|+.+|+.++++.|+..|+++|..|.+|.|+|.+|+++||.|++++|+..
T Consensus       342 TALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~  395 (452)
T KOG0514|consen  342 TALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAV  395 (452)
T ss_pred             hhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhcc
Confidence            666666666666666666666666666666666666666666666666666544


No 55 
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.88  E-value=1.3e-21  Score=119.39  Aligned_cols=125  Identities=30%  Similarity=0.383  Sum_probs=105.2

Q ss_pred             HHHHHHHHhCCHHHHHHHHHcCC-CCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCcHH
Q 031662           24 DALLAAARYDDIEDVISLASAGV-PLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACLNGHTE  102 (155)
Q Consensus        24 ~~l~~A~~~~~~~~v~~ll~~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~~~~~  102 (155)
                      .-+.+|+..+.+..|+.|++..+ .+|.+|.++.||||-|++.++.++++.|+..|++.+.+...|+||||.||...+.+
T Consensus        65 rl~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN~~  144 (228)
T KOG0512|consen   65 RLLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNNFE  144 (228)
T ss_pred             HHHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccchh
Confidence            34788999999999999988775 46889999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHcCCCCcccCCCCCCHHHHHHHCCC-HHHHHHHH-HHHhhcc
Q 031662          103 VAKKLVLSGANISVLNSHEQTPIDEALSRGK-MDIIDAIN-TAVAQLE  148 (155)
Q Consensus       103 ~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~-~~~~~~L~-~~g~~~~  148 (155)
                      ++.+|+++|++++......+||||+|+...+ ...+++|+ +.+.+..
T Consensus       145 va~~LLqhgaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg  192 (228)
T KOG0512|consen  145 VAGRLLQHGADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPG  192 (228)
T ss_pred             HHHHHHhccCcccccccccchhhHHhhcccchHHHHHHHhhccccChh
Confidence            9999999999999998888999999988665 34445443 3344433


No 56 
>PHA02730 ankyrin-like protein; Provisional
Probab=99.88  E-value=1.2e-21  Score=143.44  Aligned_cols=132  Identities=17%  Similarity=0.066  Sum_probs=116.7

Q ss_pred             CCCcccHHHHHHHHHhC---CHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCC--CHHHHHHHHhcCC--CCCCCCCCCC
Q 031662           17 TSSPENIDALLAAARYD---DIEDVISLASAGVPLDSKDSQGRTALHMASANG--HLGIVEYLIGRGV--DINASNEEKN   89 (155)
Q Consensus        17 ~~~~~~~~~l~~A~~~~---~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~--~~~~~~~ll~~~~--~~~~~~~~~~   89 (155)
                      ..+..|.||||+|+..+   +.+++++|+++|++++.+|..|.||||+|+..+  +.+++++|++.|+  +++..+..+.
T Consensus        36 ~kd~~G~TaLh~A~~~~~~~~~eivklLLs~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~~~~~~d  115 (672)
T PHA02730         36 HIDRRGNNALHCYVSNKCDTDIKIVRLLLSRGVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASNELTSNIND  115 (672)
T ss_pred             hcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCCcccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCcccccccCC
Confidence            45678999999999987   599999999999999999999999999999876  7999999999965  5577787899


Q ss_pred             CHHHHHHh--cCcHHHHHHHHH-cCCCCcccCC-----CCCCHHHHHHHCCCHHHHHHHHHHHhhcc
Q 031662           90 TPLHYACL--NGHTEVAKKLVL-SGANISVLNS-----HEQTPIDEALSRGKMDIIDAINTAVAQLE  148 (155)
Q Consensus        90 t~l~~a~~--~~~~~~~~~Ll~-~~~~~~~~~~-----~~~t~l~~a~~~~~~~~~~~L~~~g~~~~  148 (155)
                      +|++.++.  .++.+++++|++ .+.+++....     .|.+|+.++...++.++|++|+++|+++.
T Consensus       116 ~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~eIvklLi~~g~~v~  182 (672)
T PHA02730        116 FDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPRPEVLLWLLKSECYST  182 (672)
T ss_pred             chHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCCCchHHHHHHHHcCCccc
Confidence            99998888  888999999996 6677765532     78999999999999999999999999984


No 57 
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.87  E-value=3.2e-21  Score=117.68  Aligned_cols=122  Identities=25%  Similarity=0.281  Sum_probs=109.7

Q ss_pred             cCCCccCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCC
Q 031662           11 RTQTTETSSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNT   90 (155)
Q Consensus        11 ~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t   90 (155)
                      +...++.++.+++||||.|+..|++++++.|+..|++.+.+...||||||-||.-.+.+++.+|+++|+++++......|
T Consensus        86 ~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN~~va~~LLqhgaDVnA~t~g~lt  165 (228)
T KOG0512|consen   86 KANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNNFEVAGRLLQHGADVNAQTKGLLT  165 (228)
T ss_pred             ccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccchhHHHHHHhccCcccccccccch
Confidence            34566788999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCcHHH-HHHHH-HcCCCCcccCCCCCCHHHHHHHCC
Q 031662           91 PLHYACLNGHTEV-AKKLV-LSGANISVLNSHEQTPIDEALSRG  132 (155)
Q Consensus        91 ~l~~a~~~~~~~~-~~~Ll-~~~~~~~~~~~~~~t~l~~a~~~~  132 (155)
                      |||+++-..+... +++|+ +.+..+...+..+.||+.+|.+.+
T Consensus       166 pLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT~  209 (228)
T KOG0512|consen  166 PLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIARRTS  209 (228)
T ss_pred             hhHHhhcccchHHHHHHHhhccccChhhhcCccchHHHHHHHhh
Confidence            9999987776544 45554 567888888999999999998864


No 58 
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.85  E-value=4.8e-21  Score=138.67  Aligned_cols=138  Identities=27%  Similarity=0.273  Sum_probs=129.9

Q ss_pred             CcccccCCCccCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCC
Q 031662            6 DPSINRTQTTETSSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASN   85 (155)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~   85 (155)
                      -+...+....+..+..++|+||.|+..|+.++++.|++..+-++..+..|.+|||+|++.|+.++++.++..+..+|..+
T Consensus        33 l~~~trsds~n~qd~~gfTalhha~Lng~~~is~llle~ea~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~  112 (854)
T KOG0507|consen   33 LFFTTRSDSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNAVN  112 (854)
T ss_pred             CCCCCCCccccccCccchhHHHHHHhcCchHHHHHHhcchhhhhhhhccCcceEEehhhcCcchHHHHHHhcccCCCccc
Confidence            34445666677888899999999999999999999999999899899889999999999999999999999998899999


Q ss_pred             CCCCCHHHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHH
Q 031662           86 EEKNTPLHYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTA  143 (155)
Q Consensus        86 ~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~  143 (155)
                      ..|.||||.|++.|+.+++.+|+++|++...++..+.|++++|++.|..++++.|++.
T Consensus       113 ~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i~nns~~t~ldlA~qfgr~~Vvq~ll~~  170 (854)
T KOG0507|consen  113 IENETPLHLAAQHGHLEVVFYLLKKNADPFIRNNSKETVLDLASRFGRAEVVQMLLQK  170 (854)
T ss_pred             ccCcCccchhhhhcchHHHHHHHhcCCCccccCcccccHHHHHHHhhhhHHHHHHhhh
Confidence            9999999999999999999999999999999999999999999999999999999988


No 59 
>PHA02792 ankyrin-like protein; Provisional
Probab=99.85  E-value=1.4e-20  Score=136.76  Aligned_cols=128  Identities=16%  Similarity=0.132  Sum_probs=112.8

Q ss_pred             ccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCC--ccHHHHHHhCCCH---HHHHHHHhcCCCCCCCCCCCCCHHHHH
Q 031662           21 ENIDALLAAARYDDIEDVISLASAGVPLDSKDSQG--RTALHMASANGHL---GIVEYLIGRGVDINASNEEKNTPLHYA   95 (155)
Q Consensus        21 ~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~--~~~l~~a~~~~~~---~~~~~ll~~~~~~~~~~~~~~t~l~~a   95 (155)
                      ...+.++.|+..|+.+++++|+++|++++.++..|  .||||+|+.....   +++++++++|++++.+|..|.||||+|
T Consensus       338 ~~~n~~~~Aa~~gn~eIVelLIs~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~GADIN~kD~~G~TPLh~A  417 (631)
T PHA02792        338 KHINKYFQKFDNRDPKVVEYILKNGNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCKPYIDDINKIDKHGRSILYYC  417 (631)
T ss_pred             CcchHHHHHHHcCCHHHHHHHHHcCCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhcCCccccccccCcchHHHH
Confidence            35667999999999999999999999999888764  6999998776654   468999999999999999999999999


Q ss_pred             HhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHH--C--------CCHHHHHHHHHHHhhcc
Q 031662           96 CLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALS--R--------GKMDIIDAINTAVAQLE  148 (155)
Q Consensus        96 ~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~--~--------~~~~~~~~L~~~g~~~~  148 (155)
                      +..++.+++++|+++|++++.++..|.||+++|+.  .        ...++++.|+++|.+++
T Consensus       418 a~~~n~eivelLLs~GADIN~kD~~G~TpL~~A~~~~~~~~~~i~~~~~~il~lLLs~~p~i~  480 (631)
T PHA02792        418 IESHSVSLVEWLIDNGADINITTKYGSTCIGICVILAHACIPEIAELYIKILEIILSKLPTIE  480 (631)
T ss_pred             HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHHHhcccHHHHHHHHHHHHHHHhcCCChh
Confidence            99999999999999999999999999999999976  2        22567899999987765


No 60 
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.85  E-value=5.8e-20  Score=124.33  Aligned_cols=119  Identities=18%  Similarity=0.240  Sum_probs=104.1

Q ss_pred             CcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCC-CCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHh
Q 031662           19 SPENIDALLAAARYDDIEDVISLASAGVPLDSKD-SQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACL   97 (155)
Q Consensus        19 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~-~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~   97 (155)
                      +..|.||||+|++.++.+++++|+++|++++.++ ..|.||||+|+..++.+++++|+.+|++++.++..|.||+++|+.
T Consensus        67 d~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpLh~Aa~~~~~eivklLL~~GAdin~kd~~G~TpL~~A~~  146 (300)
T PHA02884         67 ENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELALM  146 (300)
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Confidence            3578999999999999999999999999999864 579999999999999999999999999999999999999999999


Q ss_pred             cCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHh
Q 031662           98 NGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVA  145 (155)
Q Consensus        98 ~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~  145 (155)
                      .++.+++..+.  |..   .+..+.+|.+.+   ++.+++++|+++++
T Consensus       147 ~~~~~~~~~~~--~~~---~~~~~~~~~~~~---~n~ei~~~Lish~v  186 (300)
T PHA02884        147 ICNNFLAFMIC--DNE---ISNFYKHPKKIL---INFDILKILVSHFI  186 (300)
T ss_pred             hCChhHHHHhc--CCc---ccccccChhhhh---ccHHHHHHHHHHHH
Confidence            99888876554  322   355667787764   46899999999998


No 61 
>PHA02741 hypothetical protein; Provisional
Probab=99.85  E-value=2.3e-20  Score=117.90  Aligned_cols=103  Identities=20%  Similarity=0.305  Sum_probs=92.4

Q ss_pred             CCCCCCCccHHHHHHhCCCHHHHHHHHh------cCCCCCCCCCCCCCHHHHHHhcCc----HHHHHHHHHcCCCCcccC
Q 031662           49 DSKDSQGRTALHMASANGHLGIVEYLIG------RGVDINASNEEKNTPLHYACLNGH----TEVAKKLVLSGANISVLN  118 (155)
Q Consensus        49 ~~~~~~~~~~l~~a~~~~~~~~~~~ll~------~~~~~~~~~~~~~t~l~~a~~~~~----~~~~~~Ll~~~~~~~~~~  118 (155)
                      +.++..|.|+||+|+..|+.++++.|+.      .|++++.+|..|.||||+|+..++    .+++++|++.|++++.++
T Consensus        15 ~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~   94 (169)
T PHA02741         15 AEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQE   94 (169)
T ss_pred             hccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCC
Confidence            4567889999999999999999998854      357889999999999999999998    588999999999999988


Q ss_pred             C-CCCCHHHHHHHCCCHHHHHHHHH-HHhhcccCC
Q 031662          119 S-HEQTPIDEALSRGKMDIIDAINT-AVAQLELGG  151 (155)
Q Consensus       119 ~-~~~t~l~~a~~~~~~~~~~~L~~-~g~~~~~~~  151 (155)
                      . .|+||||+|+..++.+++++|+. .|++++..+
T Consensus        95 ~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n  129 (169)
T PHA02741         95 MLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCN  129 (169)
T ss_pred             cCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCC
Confidence            5 89999999999999999999997 588887654


No 62 
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.84  E-value=1.5e-20  Score=142.27  Aligned_cols=127  Identities=22%  Similarity=0.231  Sum_probs=110.8

Q ss_pred             CcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCC--------------CCCccHHHHHHhCCCHHHHHHHHhcCCCCCCC
Q 031662           19 SPENIDALLAAARYDDIEDVISLASAGVPLDSKD--------------SQGRTALHMASANGHLGIVEYLIGRGVDINAS   84 (155)
Q Consensus        19 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~--------------~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~   84 (155)
                      ...|.||||.|+..|+.++++.|+++|++++.+.              ..|.+|||.|+..++.+++++|+++|++++.+
T Consensus       125 ~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~  204 (743)
T TIGR00870       125 FTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADILTA  204 (743)
T ss_pred             cCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcchhhH
Confidence            4579999999999999999999999999988542              35899999999999999999999999999999


Q ss_pred             CCCCCCHHHHHHhcC---------cHHHHHHHHHcCCCC-------cccCCCCCCHHHHHHHCCCHHHHHHHHHHHh
Q 031662           85 NEEKNTPLHYACLNG---------HTEVAKKLVLSGANI-------SVLNSHEQTPIDEALSRGKMDIIDAINTAVA  145 (155)
Q Consensus        85 ~~~~~t~l~~a~~~~---------~~~~~~~Ll~~~~~~-------~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~  145 (155)
                      |..|+||||+|+..+         ...+.+++++.+...       +..|..|.|||++|+..|+.+++++|++.+.
T Consensus       205 d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~g~~~l~~lLL~~~~  281 (743)
T TIGR00870       205 DSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGRIVLFRLKLAIKY  281 (743)
T ss_pred             hhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhhcCCccHHHHHHHHHH
Confidence            999999999999886         234566666655443       6678999999999999999999999999653


No 63 
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.84  E-value=2e-20  Score=102.72  Aligned_cols=103  Identities=27%  Similarity=0.445  Sum_probs=94.9

Q ss_pred             HHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCcHHHH
Q 031662           25 ALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACLNGHTEVA  104 (155)
Q Consensus        25 ~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~  104 (155)
                      .+.|++++|..+.|+.....|.++|... .|++|||||+-+|..++++||+..|++++.+|+.|-|||..|+..|+.+|+
T Consensus         5 ~~~W~vkNG~~DeVk~~v~~g~nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~cV   83 (117)
T KOG4214|consen    5 SVAWNVKNGEIDEVKQSVNEGLNVNEIY-GGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDCV   83 (117)
T ss_pred             hHhhhhccCcHHHHHHHHHccccHHHHh-CCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHHH
Confidence            3678999999999999999998877544 789999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHcCCCCcccCCCCCCHHHHH
Q 031662          105 KKLVLSGANISVLNSHEQTPIDEA  128 (155)
Q Consensus       105 ~~Ll~~~~~~~~~~~~~~t~l~~a  128 (155)
                      ++|++.|++-..+..+|.+.+..+
T Consensus        84 klLL~~GAdrt~~~PdG~~~~eat  107 (117)
T KOG4214|consen   84 KLLLQNGADRTIHAPDGTALIEAT  107 (117)
T ss_pred             HHHHHcCcccceeCCCchhHHhhc
Confidence            999999999999888888877644


No 64 
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.84  E-value=3e-20  Score=135.46  Aligned_cols=127  Identities=28%  Similarity=0.274  Sum_probs=118.6

Q ss_pred             CCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCC-----------------------CCCCccHHHHHHhCCCHHHHHH
Q 031662           17 TSSPENIDALLAAARYDDIEDVISLASAGVPLDSK-----------------------DSQGRTALHMASANGHLGIVEY   73 (155)
Q Consensus        17 ~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~-----------------------~~~~~~~l~~a~~~~~~~~~~~   73 (155)
                      .....|.||||+|+.+.+.++|++|++.|+|++.+                       -..|+.||-+|+..++.+++++
T Consensus       179 ~eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrl  258 (782)
T KOG3676|consen  179 SEEYYGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRL  258 (782)
T ss_pred             hHhhcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHH
Confidence            34578999999999999999999999999998642                       1257899999999999999999


Q ss_pred             HHhcCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCC--CcccCCCCCCHHHHHHHCCCHHHHHHHHHH
Q 031662           74 LIGRGVDINASNEEKNTPLHYACLNGHTEVAKKLVLSGAN--ISVLNSHEQTPIDEALSRGKMDIIDAINTA  143 (155)
Q Consensus        74 ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~--~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~  143 (155)
                      |+++|+|++++|..|+|.||.++.....+|.++++++|++  ...+|..|-|||.+|++.|..++++.+++.
T Consensus       259 Ll~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAaklGk~emf~~ile~  330 (782)
T KOG3676|consen  259 LLAHGADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGLTPLTLAAKLGKKEMFQHILER  330 (782)
T ss_pred             HHhcCCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCChHHHHHHhhhHHHHHHHHHh
Confidence            9999999999999999999999999999999999999999  889999999999999999999999999988


No 65 
>PHA02792 ankyrin-like protein; Provisional
Probab=99.82  E-value=1.4e-19  Score=131.65  Aligned_cols=128  Identities=18%  Similarity=0.238  Sum_probs=112.8

Q ss_pred             cCCCcccHHHHH-HHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHh-CCCHHHHHHHHhcCCCC------------
Q 031662           16 ETSSPENIDALL-AAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASA-NGHLGIVEYLIGRGVDI------------   81 (155)
Q Consensus        16 ~~~~~~~~~~l~-~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~-~~~~~~~~~ll~~~~~~------------   81 (155)
                      ...+-.+.+++| .|...|++|++++|+++|+++|..+..+.+++++|+. .++.+++++|+++|+++            
T Consensus        65 ~~~n~~~~~~~~~~~s~n~~lElvk~LI~~GAdvN~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~  144 (631)
T PHA02792         65 DYKNINDFDIFEYLCSDNIDIELLKLLISKGLEINSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIII  144 (631)
T ss_pred             CcCccCCccHHHHHHHhcccHHHHHHHHHcCCCcccccCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhh
Confidence            345556777876 5667899999999999999999999889999999965 68999999999999763            


Q ss_pred             ------------------------CCCCCCCCCHHHHHHhcC-------cHHHHHHHHHcCCCCcccCCCCCCHHHHHHH
Q 031662           82 ------------------------NASNEEKNTPLHYACLNG-------HTEVAKKLVLSGANISVLNSHEQTPIDEALS  130 (155)
Q Consensus        82 ------------------------~~~~~~~~t~l~~a~~~~-------~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~  130 (155)
                                              +.+|..|.||||+++..+       +.++++.|+++|++++.+|..|.||||+|+.
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~~d~~g~t~l~~~~~  224 (631)
T PHA02792        145 EQITRAEYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRYYTYREHTTLYYYVD  224 (631)
T ss_pred             hhcccccccchhhhccccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCccCCCCChHHHHHHH
Confidence                                    244567999999999999       8999999999999999999999999999999


Q ss_pred             CC--CHHHHHHHHHH
Q 031662          131 RG--KMDIIDAINTA  143 (155)
Q Consensus       131 ~~--~~~~~~~L~~~  143 (155)
                      +.  ..|++++|.+.
T Consensus       225 ~~~i~~ei~~~L~~~  239 (631)
T PHA02792        225 KCDIKREIFDALFDS  239 (631)
T ss_pred             cccchHHHHHHHHhc
Confidence            99  79999999874


No 66 
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.82  E-value=9.9e-21  Score=124.31  Aligned_cols=124  Identities=29%  Similarity=0.450  Sum_probs=110.0

Q ss_pred             HHHHhCCHHHHHHHHH-cCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCcHHHHHH
Q 031662           28 AAARYDDIEDVISLAS-AGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACLNGHTEVAKK  106 (155)
Q Consensus        28 ~A~~~~~~~~v~~ll~-~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~  106 (155)
                      .-|+.|+.-.|+..++ ..-+.|..|..|.+|||+|++.|+..+++.|+.+|+.+|..+....||||+|+..|+.+++..
T Consensus         6 ~wcregna~qvrlwld~tehdln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqk   85 (448)
T KOG0195|consen    6 GWCREGNAFQVRLWLDDTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQK   85 (448)
T ss_pred             hhhhcCCeEEEEEEecCcccccccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHH
Confidence            3455555444444444 346788889999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccCC
Q 031662          107 LVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELGG  151 (155)
Q Consensus       107 Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~  151 (155)
                      |++..++++..+..|.||||+||.-|+..+.+-|++.|+.+++.+
T Consensus        86 ll~~kadvnavnehgntplhyacfwgydqiaedli~~ga~v~icn  130 (448)
T KOG0195|consen   86 LLSRKADVNAVNEHGNTPLHYACFWGYDQIAEDLISCGAAVNICN  130 (448)
T ss_pred             HHHHhcccchhhccCCCchhhhhhhcHHHHHHHHHhccceeeecc
Confidence            999999999999999999999999999999999999999987654


No 67 
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.82  E-value=4.6e-20  Score=114.92  Aligned_cols=99  Identities=21%  Similarity=0.289  Sum_probs=90.8

Q ss_pred             CCCcccHHHHHHHHHhCCH---HHHHHHHHcCCCCCCCC-CCCccHHHHHHhCCCHHHHHHHHh-cCCCCCCCCCCCCCH
Q 031662           17 TSSPENIDALLAAARYDDI---EDVISLASAGVPLDSKD-SQGRTALHMASANGHLGIVEYLIG-RGVDINASNEEKNTP   91 (155)
Q Consensus        17 ~~~~~~~~~l~~A~~~~~~---~~v~~ll~~~~~~~~~~-~~~~~~l~~a~~~~~~~~~~~ll~-~~~~~~~~~~~~~t~   91 (155)
                      ..+..|.||||+|+..++.   +++++|++.|.+++.++ ..|.||||+|+..++.+++++|+. .+++++.++..|.||
T Consensus        50 ~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tp  129 (154)
T PHA02736         50 EYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTP  129 (154)
T ss_pred             HhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCH
Confidence            3467899999999999987   46889999999999998 489999999999999999999998 499999999999999


Q ss_pred             HHHHHhcCcHHHHHHHHHcCCCCc
Q 031662           92 LHYACLNGHTEVAKKLVLSGANIS  115 (155)
Q Consensus        92 l~~a~~~~~~~~~~~Ll~~~~~~~  115 (155)
                      ||+|+..++.+++++|+++|++.+
T Consensus       130 L~~A~~~~~~~i~~~Ll~~ga~~~  153 (154)
T PHA02736        130 YYVACERHDAKMMNILRAKGAQCK  153 (154)
T ss_pred             HHHHHHcCCHHHHHHHHHcCCCCC
Confidence            999999999999999999998764


No 68 
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.81  E-value=1.1e-18  Score=114.57  Aligned_cols=128  Identities=30%  Similarity=0.453  Sum_probs=120.3

Q ss_pred             CCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCC-----HHHHHHHHhcCC---CCCCCCCCC
Q 031662           17 TSSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGH-----LGIVEYLIGRGV---DINASNEEK   88 (155)
Q Consensus        17 ~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~-----~~~~~~ll~~~~---~~~~~~~~~   88 (155)
                      ..+..+.++++.++..++.+.+++++..+.+++.++..|.|++|+|+..++     .+++++|++.|+   ..+.++..|
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g  147 (235)
T COG0666          68 ARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDG  147 (235)
T ss_pred             cCCccccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCC
Confidence            334557889999999999999999999999999999999999999999999     999999999999   566679999


Q ss_pred             CCHHHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHH
Q 031662           89 NTPLHYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAV  144 (155)
Q Consensus        89 ~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g  144 (155)
                      .||+|+|+..|+.+++++|++.|++++.++..|.|+++.|+..++.+++..+.+.+
T Consensus       148 ~tpl~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~  203 (235)
T COG0666         148 NTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKG  203 (235)
T ss_pred             CchhHHHHHcCchHHHHHHHhcCCCCcccccCCCcchhhhcccchHHHHHHHHhcC
Confidence            99999999999999999999999999999999999999999999999999999965


No 69 
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.81  E-value=5.4e-19  Score=133.87  Aligned_cols=136  Identities=21%  Similarity=0.217  Sum_probs=96.7

Q ss_pred             CCCccCCCcccHHHHH-HHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCC---HHHHHHHHhcCCC------C
Q 031662           12 TQTTETSSPENIDALL-AAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGH---LGIVEYLIGRGVD------I   81 (155)
Q Consensus        12 ~~~~~~~~~~~~~~l~-~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~---~~~~~~ll~~~~~------~   81 (155)
                      +.+++..+..|.|||| .|+..++.++++.|++.+.    .+..|.|+||.|+....   ..+++.+...+.+      +
T Consensus        42 ~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~----~~~~G~T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~  117 (743)
T TIGR00870        42 KLNINCPDRLGRSALFVAAIENENLELTELLLNLSC----RGAVGDTLLHAISLEYVDAVEAILLHLLAAFRKSGPLELA  117 (743)
T ss_pred             ccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCC----CCCcChHHHHHHHhccHHHHHHHHHHHhhcccccCchhhh
Confidence            4445556677788888 7777777778877777765    45567777877776221   1233333332211      1


Q ss_pred             C----CCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcccC--------------CCCCCHHHHHHHCCCHHHHHHHHHH
Q 031662           82 N----ASNEEKNTPLHYACLNGHTEVAKKLVLSGANISVLN--------------SHEQTPIDEALSRGKMDIIDAINTA  143 (155)
Q Consensus        82 ~----~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~--------------~~~~t~l~~a~~~~~~~~~~~L~~~  143 (155)
                      +    .....|.||||+|+..|+.+++++|+++|++++.++              ..|.|||+.|+..++.+++++|+++
T Consensus       118 ~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~  197 (743)
T TIGR00870       118 NDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSED  197 (743)
T ss_pred             ccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcC
Confidence            1    112468899999999999999999999999988653              2588999999999999999999999


Q ss_pred             HhhcccCC
Q 031662          144 VAQLELGG  151 (155)
Q Consensus       144 g~~~~~~~  151 (155)
                      |+|++..+
T Consensus       198 gadin~~d  205 (743)
T TIGR00870       198 PADILTAD  205 (743)
T ss_pred             CcchhhHh
Confidence            98876543


No 70 
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.80  E-value=7.3e-19  Score=115.28  Aligned_cols=133  Identities=29%  Similarity=0.396  Sum_probs=121.5

Q ss_pred             cHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCC-CCCCCCCHHHHHHhcCc
Q 031662           22 NIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINA-SNEEKNTPLHYACLNGH  100 (155)
Q Consensus        22 ~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~-~~~~~~t~l~~a~~~~~  100 (155)
                      -..+|..++.+++++....|++..-++|.+|..|.++|..|++.|+.++++.+++.|+|+|. ++..+.|||++|+..|+
T Consensus        12 ~~~~Lle~i~Kndt~~a~~LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn   91 (396)
T KOG1710|consen   12 PKSPLLEAIDKNDTEAALALLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGN   91 (396)
T ss_pred             hhhHHHHHHccCcHHHHHHHHHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCC
Confidence            45689999999999999999999878999999999999999999999999999999999986 67788999999999999


Q ss_pred             HHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccCCCcc
Q 031662          101 TEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELGGFTV  154 (155)
Q Consensus       101 ~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~~  154 (155)
                      .++.++|++.|+.....+.-|+|+-.+|+.-|+-+||..+-++-..-.+..|+.
T Consensus        92 ~dvcrllldaGa~~~~vNsvgrTAaqmAAFVG~H~CV~iINN~~t~~~leyyt~  145 (396)
T KOG1710|consen   92 QDVCRLLLDAGARMYLVNSVGRTAAQMAAFVGHHECVAIINNHITIDVLEYYTR  145 (396)
T ss_pred             chHHHHHHhccCccccccchhhhHHHHHHHhcchHHHHHHhccccHHHHHHhcc
Confidence            999999999999999999999999999999999999999887765555555543


No 71 
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.79  E-value=1.7e-19  Score=121.47  Aligned_cols=104  Identities=27%  Similarity=0.452  Sum_probs=89.1

Q ss_pred             CCCCCCCCccHHHHHHhCCCHHHHHHHHhcC-CCCCCCCCCCCCHHHHHHhc-----CcHHHHHHHHHcCCCCccc-CCC
Q 031662           48 LDSKDSQGRTALHMASANGHLGIVEYLIGRG-VDINASNEEKNTPLHYACLN-----GHTEVAKKLVLSGANISVL-NSH  120 (155)
Q Consensus        48 ~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~t~l~~a~~~-----~~~~~~~~Ll~~~~~~~~~-~~~  120 (155)
                      +|.-|.+|+|+|||++...++++++.|++.| ++++.+++.|.||.++++..     .+.+++..|+.. .++|.+ ...
T Consensus       261 VNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~m-gnVNaKAsQ~  339 (452)
T KOG0514|consen  261 VNLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKM-GDVNAKASQH  339 (452)
T ss_pred             hhhhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhc-cCcchhhhhh
Confidence            4678999999999999999999999999985 88999999999999987643     345677777755 566665 568


Q ss_pred             CCCHHHHHHHCCCHHHHHHHHHHHhhcccCCC
Q 031662          121 EQTPIDEALSRGKMDIIDAINTAVAQLELGGF  152 (155)
Q Consensus       121 ~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~  152 (155)
                      |+|+|.+|+.+|+.++|+.|+..|+|+++++-
T Consensus       340 gQTALMLAVSHGr~d~vk~LLacgAdVNiQDd  371 (452)
T KOG0514|consen  340 GQTALMLAVSHGRVDMVKALLACGADVNIQDD  371 (452)
T ss_pred             cchhhhhhhhcCcHHHHHHHHHccCCCccccC
Confidence            99999999999999999999999999998764


No 72 
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.76  E-value=1.1e-18  Score=126.62  Aligned_cols=140  Identities=24%  Similarity=0.231  Sum_probs=122.0

Q ss_pred             cCCCccCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCC
Q 031662           11 RTQTTETSSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNT   90 (155)
Q Consensus        11 ~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t   90 (155)
                      .....+..+..|..|||+|++.|+.++++.++.++..+|.....|.+|||.|+..++.+++.+|+.++++.-.++..+.|
T Consensus        71 ~ea~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i~nns~~t  150 (854)
T KOG0507|consen   71 YEALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQHGHLEVVFYLLKKNADPFIRNNSKET  150 (854)
T ss_pred             chhhhhhhhccCcceEEehhhcCcchHHHHHHhcccCCCcccccCcCccchhhhhcchHHHHHHHhcCCCccccCccccc
Confidence            33444555678899999999999999999999999888999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCcHHHHHHHHHcCCC--------CcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccC
Q 031662           91 PLHYACLNGHTEVAKKLVLSGAN--------ISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELG  150 (155)
Q Consensus        91 ~l~~a~~~~~~~~~~~Ll~~~~~--------~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~  150 (155)
                      ++..|+++|+.++++.|+.....        ...++..+.+|+|+|++.|+.++++.|+..|.+++..
T Consensus       151 ~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~~~ll~ag~din~~  218 (854)
T KOG0507|consen  151 VLDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECMQALLEAGFDINYT  218 (854)
T ss_pred             HHHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcchHHHHHHHHhcCCCcccc
Confidence            99999999999999999875211        2345667789999999999999999999999988753


No 73 
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.76  E-value=1.8e-17  Score=123.81  Aligned_cols=106  Identities=32%  Similarity=0.375  Sum_probs=97.9

Q ss_pred             HHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCcHHH
Q 031662           24 DALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACLNGHTEV  103 (155)
Q Consensus        24 ~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~  103 (155)
                      ..|+.|+..|+.+.++.|++.|++++.+|..|.||||+|+..++.+++++|+++|++++.+|..|.||||+|+..++.++
T Consensus        84 ~~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~i  163 (664)
T PTZ00322         84 VELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREV  163 (664)
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHH
Confidence            35889999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHc-------CCCCcccCCCCCCHHHHHH
Q 031662          104 AKKLVLS-------GANISVLNSHEQTPIDEAL  129 (155)
Q Consensus       104 ~~~Ll~~-------~~~~~~~~~~~~t~l~~a~  129 (155)
                      +++|+++       |++.+..+..|.+|+..+.
T Consensus       164 v~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~~  196 (664)
T PTZ00322        164 VQLLSRHSQCHFELGANAKPDSFTGKPPSLEDS  196 (664)
T ss_pred             HHHHHhCCCcccccCCCCCccccCCCCccchhh
Confidence            9999998       8888888887777766443


No 74 
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.76  E-value=6e-18  Score=93.06  Aligned_cols=92  Identities=25%  Similarity=0.336  Sum_probs=85.0

Q ss_pred             cHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHH
Q 031662           57 TALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDI  136 (155)
Q Consensus        57 ~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~  136 (155)
                      -.+.+++..|..+-++-.+..|.+++.. ..|++|||+|+..|+.+++++|+..|++++.+|.+|.|||-.|+..||.+|
T Consensus         4 ~~~~W~vkNG~~DeVk~~v~~g~nVn~~-~ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~c   82 (117)
T KOG4214|consen    4 MSVAWNVKNGEIDEVKQSVNEGLNVNEI-YGGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDC   82 (117)
T ss_pred             hhHhhhhccCcHHHHHHHHHccccHHHH-hCCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHH
Confidence            3577889999999999999889888765 389999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhccc
Q 031662          137 IDAINTAVAQLEL  149 (155)
Q Consensus       137 ~~~L~~~g~~~~~  149 (155)
                      |++|++.|++...
T Consensus        83 VklLL~~GAdrt~   95 (117)
T KOG4214|consen   83 VKLLLQNGADRTI   95 (117)
T ss_pred             HHHHHHcCcccce
Confidence            9999999998754


No 75 
>cd00204 ANK ankyrin repeats;  ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.75  E-value=5.8e-17  Score=96.99  Aligned_cols=101  Identities=36%  Similarity=0.641  Sum_probs=93.5

Q ss_pred             CCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHH
Q 031662           51 KDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALS  130 (155)
Q Consensus        51 ~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~  130 (155)
                      .+..|.||||+|+..++.+++++|++.+.+.+..+..|.+|++.|+..++.+++++|++.++.++..+..+.||+++|+.
T Consensus         3 ~~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~~   82 (126)
T cd00204           3 RDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAAR   82 (126)
T ss_pred             cCcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHH
Confidence            45678999999999999999999999999988899999999999999999999999999999899999999999999999


Q ss_pred             CCCHHHHHHHHHHHhhcccCC
Q 031662          131 RGKMDIIDAINTAVAQLELGG  151 (155)
Q Consensus       131 ~~~~~~~~~L~~~g~~~~~~~  151 (155)
                      .++.+++++|++++.+.+..+
T Consensus        83 ~~~~~~~~~L~~~~~~~~~~~  103 (126)
T cd00204          83 NGNLDVVKLLLKHGADVNARD  103 (126)
T ss_pred             cCcHHHHHHHHHcCCCCcccC
Confidence            999999999999986665444


No 76 
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.72  E-value=6.2e-17  Score=113.86  Aligned_cols=119  Identities=29%  Similarity=0.362  Sum_probs=105.6

Q ss_pred             HHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCcHHHH
Q 031662           25 ALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACLNGHTEVA  104 (155)
Q Consensus        25 ~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~  104 (155)
                      .|..|+-.|.+++|+.++..-.|+...+..|.|+||-|+..||.++++||++.|+++|..|..|+||||+|+..++..++
T Consensus       553 LLLDaaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~c  632 (752)
T KOG0515|consen  553 LLLDAALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPMC  632 (752)
T ss_pred             HHHhhhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHHH
Confidence            35678899999999999999888888888999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHcCCCCcccC-CCCCCHHHHH--HHCCCHHHHHHHHHH
Q 031662          105 KKLVLSGANISVLN-SHEQTPIDEA--LSRGKMDIIDAINTA  143 (155)
Q Consensus       105 ~~Ll~~~~~~~~~~-~~~~t~l~~a--~~~~~~~~~~~L~~~  143 (155)
                      +.|++.|+.+.... .++.|+...+  .+.|+.+|.+||..-
T Consensus       633 kqLVe~GaavfAsTlSDmeTa~eKCee~eeGY~~CsqyL~~v  674 (752)
T KOG0515|consen  633 KQLVESGAAVFASTLSDMETAAEKCEEMEEGYDQCSQYLYGV  674 (752)
T ss_pred             HHHHhccceEEeeecccccchhhhcchhhhhHHHHHHHHHHH
Confidence            99999998876543 4567888755  356889999999754


No 77 
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.72  E-value=9e-17  Score=112.85  Aligned_cols=132  Identities=27%  Similarity=0.415  Sum_probs=119.3

Q ss_pred             ccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCc
Q 031662           21 ENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACLNGH  100 (155)
Q Consensus        21 ~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~~~  100 (155)
                      ...-.+.-|+..++.+-+..++..|+.++....+|.|++|.+|.-.+.+|+++++++|++|+..|..++||+|.|+..|+
T Consensus        39 ~~sa~~l~A~~~~d~~ev~~ll~~ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~  118 (527)
T KOG0505|consen   39 EDSAVFLEACSRGDLEEVRKLLNRGASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGY  118 (527)
T ss_pred             CchHHHHhccccccHHHHHHHhccCCCccccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhccccc
Confidence            34456888999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHcCCC-----------------------------------------------------------CcccCCCC
Q 031662          101 TEVAKKLVLSGAN-----------------------------------------------------------ISVLNSHE  121 (155)
Q Consensus       101 ~~~~~~Ll~~~~~-----------------------------------------------------------~~~~~~~~  121 (155)
                      ..++++|+.+|++                                                           .+.++..|
T Consensus       119 ~~i~~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG  198 (527)
T KOG0505|consen  119 LNIVEYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARG  198 (527)
T ss_pred             HHHHHHHHHhhhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhcccccccccccc
Confidence            9999999987652                                                           23455568


Q ss_pred             CCHHHHHHHCCCHHHHHHHHHHHhhcccCCC
Q 031662          122 QTPIDEALSRGKMDIIDAINTAVAQLELGGF  152 (155)
Q Consensus       122 ~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~  152 (155)
                      -|.||.|+-.|+.++.++|++.|.+++++++
T Consensus       199 ~T~lHvAaa~Gy~e~~~lLl~ag~~~~~~D~  229 (527)
T KOG0505|consen  199 ATALHVAAANGYTEVAALLLQAGYSVNIKDY  229 (527)
T ss_pred             chHHHHHHhhhHHHHHHHHHHhccCcccccc
Confidence            9999999999999999999999999987765


No 78 
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.71  E-value=1.5e-16  Score=118.91  Aligned_cols=95  Identities=28%  Similarity=0.446  Sum_probs=88.9

Q ss_pred             HHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHH
Q 031662           58 ALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDII  137 (155)
Q Consensus        58 ~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~  137 (155)
                      .|+.|+..|+.+.+++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++
T Consensus        85 ~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~iv  164 (664)
T PTZ00322         85 ELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVV  164 (664)
T ss_pred             HHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHH
Confidence            47889999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHH-------HhhcccCCC
Q 031662          138 DAINTA-------VAQLELGGF  152 (155)
Q Consensus       138 ~~L~~~-------g~~~~~~~~  152 (155)
                      ++|+++       |++....++
T Consensus       165 ~~Ll~~~~~~~~~ga~~~~~~~  186 (664)
T PTZ00322        165 QLLSRHSQCHFELGANAKPDSF  186 (664)
T ss_pred             HHHHhCCCcccccCCCCCcccc
Confidence            999998       666655444


No 79 
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.70  E-value=1.1e-16  Score=117.28  Aligned_cols=134  Identities=21%  Similarity=0.198  Sum_probs=114.9

Q ss_pred             CCccCCCcccHHHHHHHHHh---CCHHHHHHHHHcCCCC-----CCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCC
Q 031662           13 QTTETSSPENIDALLAAARY---DDIEDVISLASAGVPL-----DSKDSQGRTALHMASANGHLGIVEYLIGRGVDINAS   84 (155)
Q Consensus        13 ~~~~~~~~~~~~~l~~A~~~---~~~~~v~~ll~~~~~~-----~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~   84 (155)
                      +..+.+...|-|.||.|.-.   ++-++++.|++.-+.+     ......|.|+||.|+.+.+.++++.|++.|+|++++
T Consensus       134 w~~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aR  213 (782)
T KOG3676|consen  134 WKLNERGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEEYYGQSALHIAIVNRDAELVRLLLAAGADVHAR  213 (782)
T ss_pred             hccccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHhhcCcchHHHHHHhccHHHHHHHHHcCCchhhH
Confidence            44455567899999999973   4558888888865432     223456999999999999999999999999998754


Q ss_pred             C-----------------------CCCCCHHHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHH
Q 031662           85 N-----------------------EEKNTPLHYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAIN  141 (155)
Q Consensus        85 ~-----------------------~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~  141 (155)
                      -                       ..|..||.+|+..++.+++++|+++|+|++.+|..|+|.||..+.+-..+|..+++
T Consensus       214 a~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L  293 (782)
T KOG3676|consen  214 ACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGADPNAQDSNGNTVLHMLVIHFVTEMYDLAL  293 (782)
T ss_pred             hhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCCCCccccCCChHHHHHHHHHHHHHHHHHH
Confidence            1                       24778999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhh
Q 031662          142 TAVAQ  146 (155)
Q Consensus       142 ~~g~~  146 (155)
                      ++|+.
T Consensus       294 ~~ga~  298 (782)
T KOG3676|consen  294 ELGAN  298 (782)
T ss_pred             hcCCC
Confidence            99998


No 80 
>PF13637 Ank_4:  Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.69  E-value=1.5e-16  Score=81.73  Aligned_cols=54  Identities=33%  Similarity=0.570  Sum_probs=31.6

Q ss_pred             CCCHHHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHH
Q 031662           88 KNTPLHYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAIN  141 (155)
Q Consensus        88 ~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~  141 (155)
                      |+||+|+|+..|+.+++++|+++|.+++.+|.+|+||+|+|+..|+.+++++|+
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL   54 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence            456666666666666666666666666666666666666666666666666664


No 81 
>PF13857 Ank_5:  Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.68  E-value=5.8e-17  Score=83.73  Aligned_cols=55  Identities=40%  Similarity=0.645  Sum_probs=27.1

Q ss_pred             HHhcC-CCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHH
Q 031662           74 LIGRG-VDINASNEEKNTPLHYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEA  128 (155)
Q Consensus        74 ll~~~-~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a  128 (155)
                      |++++ .+++.+|..|.||||+|+..|+.+++++|++.|++++.+|..|+||+++|
T Consensus         1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA   56 (56)
T ss_dssp             -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred             CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence            34555 67777777888888888888888888888877888888888888887765


No 82 
>PF13637 Ank_4:  Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.67  E-value=3.8e-16  Score=80.20  Aligned_cols=54  Identities=50%  Similarity=0.826  Sum_probs=33.5

Q ss_pred             CccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHH
Q 031662           55 GRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACLNGHTEVAKKLV  108 (155)
Q Consensus        55 ~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll  108 (155)
                      |.|+||+|+..++.+++++|++.|.+++.+|..|.||+|+|+..|+.+++++|+
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL   54 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence            456777777777777777777777777777777777777777777777776664


No 83 
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.65  E-value=7.1e-16  Score=108.63  Aligned_cols=92  Identities=29%  Similarity=0.322  Sum_probs=86.4

Q ss_pred             HHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHH
Q 031662           59 LHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIID  138 (155)
Q Consensus        59 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~  138 (155)
                      |.-|+..|.+++++.++..-.|+...+..|-|+||-|+..|++++++||++.|+++|..|.+||||||+|+.+++..+++
T Consensus       554 LLDaaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~ck  633 (752)
T KOG0515|consen  554 LLDAALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPMCK  633 (752)
T ss_pred             HHhhhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHHHH
Confidence            55688899999999999988899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhcccC
Q 031662          139 AINTAVAQLELG  150 (155)
Q Consensus       139 ~L~~~g~~~~~~  150 (155)
                      .|++.|+-+...
T Consensus       634 qLVe~GaavfAs  645 (752)
T KOG0515|consen  634 QLVESGAAVFAS  645 (752)
T ss_pred             HHHhccceEEee
Confidence            999999877543


No 84 
>PF13857 Ank_5:  Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.63  E-value=3.8e-16  Score=80.64  Aligned_cols=55  Identities=40%  Similarity=0.678  Sum_probs=29.7

Q ss_pred             HHHcC-CCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHH
Q 031662           41 LASAG-VPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYA   95 (155)
Q Consensus        41 ll~~~-~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a   95 (155)
                      |++.+ .+++.+|..|.||||+|+.+++.+++++|++.|++++.+|..|+||+++|
T Consensus         1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA   56 (56)
T ss_dssp             -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred             CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence            45666 77788888888888888888888888888888888888888888888876


No 85 
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.60  E-value=4.7e-16  Score=117.61  Aligned_cols=131  Identities=31%  Similarity=0.416  Sum_probs=117.6

Q ss_pred             CcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCC-CCCCCCCHHHHHHh
Q 031662           19 SPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINA-SNEEKNTPLHYACL   97 (155)
Q Consensus        19 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~-~~~~~~t~l~~a~~   97 (155)
                      ..+--++|..||..|+.|++++|+.+|.++..+|..|.+||.+|+..+|..+++.|+++.++++. .|+.+.|+|.+||.
T Consensus       754 e~n~~t~LT~acaggh~e~vellv~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacs  833 (2131)
T KOG4369|consen  754 EPNIKTNLTSACAGGHREEVELLVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACS  833 (2131)
T ss_pred             CccccccccccccCccHHHHHHHHHhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecC
Confidence            34556789999999999999999999999999999999999999999999999999999888887 57888999999999


Q ss_pred             cCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhccc
Q 031662           98 NGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLEL  149 (155)
Q Consensus        98 ~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~  149 (155)
                      .|+.+++++|+..|+.-..++-...|||.+|..-|+.+++..|+..|+.++.
T Consensus       834 ggr~~vvelLl~~gankehrnvsDytPlsla~Sggy~~iI~~llS~GseInS  885 (2131)
T KOG4369|consen  834 GGRTRVVELLLNAGANKEHRNVSDYTPLSLARSGGYTKIIHALLSSGSEINS  885 (2131)
T ss_pred             CCcchHHHHHHHhhccccccchhhcCchhhhcCcchHHHHHHHhhccccccc
Confidence            9999999999999999988998999999999999999999999999977753


No 86 
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.58  E-value=4.6e-14  Score=92.55  Aligned_cols=101  Identities=37%  Similarity=0.534  Sum_probs=93.4

Q ss_pred             CCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCc-----HHHHHHHHHcCC---CCcccCCCC
Q 031662           50 SKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACLNGH-----TEVAKKLVLSGA---NISVLNSHE  121 (155)
Q Consensus        50 ~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~~~-----~~~~~~Ll~~~~---~~~~~~~~~  121 (155)
                      ..+..+.++++.++..+....+++++..+.+++.++..|.||+|+|+..++     .+++++|++.|+   ..+.++..|
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g  147 (235)
T COG0666          68 ARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDG  147 (235)
T ss_pred             cCCccccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCC
Confidence            345567899999999999999999999999999999999999999999999     999999999999   566679999


Q ss_pred             CCHHHHHHHCCCHHHHHHHHHHHhhcccC
Q 031662          122 QTPIDEALSRGKMDIIDAINTAVAQLELG  150 (155)
Q Consensus       122 ~t~l~~a~~~~~~~~~~~L~~~g~~~~~~  150 (155)
                      +||+|+|+..|+.+++++|++.|++++..
T Consensus       148 ~tpl~~A~~~~~~~~~~~ll~~~~~~~~~  176 (235)
T COG0666         148 NTPLHWAALNGDADIVELLLEAGADPNSR  176 (235)
T ss_pred             CchhHHHHHcCchHHHHHHHhcCCCCccc
Confidence            99999999999999999999999988765


No 87 
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.53  E-value=2.2e-14  Score=94.54  Aligned_cols=101  Identities=20%  Similarity=0.254  Sum_probs=91.2

Q ss_pred             ccCCCccCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCC-CCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCC
Q 031662           10 NRTQTTETSSPENIDALLAAARYDDIEDVISLASAGVPLDSK-DSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEK   88 (155)
Q Consensus        10 ~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~-~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~   88 (155)
                      ....+++..+.+|+++|..|+.+|+.++++.+++.|+|+|.. ++.+.||||+|+..|+.++.+.|++.|+.....+.-|
T Consensus        33 s~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn~dvcrllldaGa~~~~vNsvg  112 (396)
T KOG1710|consen   33 STVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGNQDVCRLLLDAGARMYLVNSVG  112 (396)
T ss_pred             HHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCCchHHHHHHhccCccccccchh
Confidence            334557788999999999999999999999999999999865 5669999999999999999999999999999999999


Q ss_pred             CCHHHHHHhcCcHHHHHHHHHc
Q 031662           89 NTPLHYACLNGHTEVAKKLVLS  110 (155)
Q Consensus        89 ~t~l~~a~~~~~~~~~~~Ll~~  110 (155)
                      +|+-..|+.-|+.+++..+-.+
T Consensus       113 rTAaqmAAFVG~H~CV~iINN~  134 (396)
T KOG1710|consen  113 RTAAQMAAFVGHHECVAIINNH  134 (396)
T ss_pred             hhHHHHHHHhcchHHHHHHhcc
Confidence            9999999999999998866543


No 88 
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.52  E-value=1.4e-14  Score=109.93  Aligned_cols=143  Identities=22%  Similarity=0.269  Sum_probs=128.9

Q ss_pred             ccccCCCccCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCC
Q 031662            8 SINRTQTTETSSPENIDALLAAARYDDIEDVISLASAGVPLDS-KDSQGRTALHMASANGHLGIVEYLIGRGVDINASNE   86 (155)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~-~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~   86 (155)
                      .+.+|.+...+++.|.+||..|+..|+..+|+.|+++.++++. .|+.+.|+|.+||..++.+.++.|+..|+.-..++-
T Consensus       776 lv~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacsggr~~vvelLl~~gankehrnv  855 (2131)
T KOG4369|consen  776 LVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACSGGRTRVVELLLNAGANKEHRNV  855 (2131)
T ss_pred             HHHhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecCCCcchHHHHHHHhhccccccch
Confidence            4567888899999999999999999999999999999999875 467799999999999999999999999999888888


Q ss_pred             CCCCHHHHHHhcCcHHHHHHHHHcCCCCccc--CCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccC
Q 031662           87 EKNTPLHYACLNGHTEVAKKLVLSGANISVL--NSHEQTPIDEALSRGKMDIIDAINTAVAQLELG  150 (155)
Q Consensus        87 ~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~--~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~  150 (155)
                      ...|||.+|...|.++++..|+..|++++.+  ...|..||.+|...|+...++.|++.|.|++..
T Consensus       856 sDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~at~~ll~~gsdiNaq  921 (2131)
T KOG4369|consen  856 SDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQAATLSLLQPGSDINAQ  921 (2131)
T ss_pred             hhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhccccHHHHHHhcccchhccc
Confidence            8899999999999999999999999888776  456789999999999999999999999888743


No 89 
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=99.36  E-value=2.8e-12  Score=89.74  Aligned_cols=90  Identities=33%  Similarity=0.474  Sum_probs=54.2

Q ss_pred             ccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhc-CCCCCCCCCCCCCHHHHHHhcC
Q 031662           21 ENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGR-GVDINASNEEKNTPLHYACLNG   99 (155)
Q Consensus        21 ~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~t~l~~a~~~~   99 (155)
                      .+...+.+|++.|++..++.+.-+|.+++.+|.+.+|+||.|+..|+.++++||++. +.+++.+|++|+|||.-|..++
T Consensus       505 ~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F~  584 (622)
T KOG0506|consen  505 DTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHFK  584 (622)
T ss_pred             cchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhcC
Confidence            444455666666666666666666666666666666666666666666666666654 4555566666666666666666


Q ss_pred             cHHHHHHHHHc
Q 031662          100 HTEVAKKLVLS  110 (155)
Q Consensus       100 ~~~~~~~Ll~~  110 (155)
                      +.+++++|.+.
T Consensus       585 h~~v~k~L~~~  595 (622)
T KOG0506|consen  585 HKEVVKLLEEA  595 (622)
T ss_pred             cHHHHHHHHHH
Confidence            66666655544


No 90 
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=99.34  E-value=8.8e-12  Score=89.30  Aligned_cols=120  Identities=24%  Similarity=0.342  Sum_probs=109.6

Q ss_pred             HHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCC--CCCCCCCCCCHHHHHHhcCcHH
Q 031662           25 ALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVD--INASNEEKNTPLHYACLNGHTE  102 (155)
Q Consensus        25 ~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~--~~~~~~~~~t~l~~a~~~~~~~  102 (155)
                      .+..|+..+++-.+.....+|.++-.++....+.||+|+..|+-+++++++++|..  .++.+..|.|+||-|+..++..
T Consensus       869 eil~av~~~D~~klqE~h~~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~  948 (1004)
T KOG0782|consen  869 EILRAVLSSDLMKLQETHLNGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRA  948 (1004)
T ss_pred             HHHHHHHhccHHHHHHHHhcCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchH
Confidence            36788888888888888888888888999999999999999999999999999854  5677899999999999999999


Q ss_pred             HHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHH
Q 031662          103 VAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAV  144 (155)
Q Consensus       103 ~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g  144 (155)
                      ++.+|++.|+++...|..|.||-.-|-+.|..+++-||-++.
T Consensus       949 vc~~lvdagasl~ktd~kg~tp~eraqqa~d~dlaayle~rq  990 (1004)
T KOG0782|consen  949 VCQLLVDAGASLRKTDSKGKTPQERAQQAGDPDLAAYLESRQ  990 (1004)
T ss_pred             HHHHHHhcchhheecccCCCChHHHHHhcCCchHHHHHhhhh
Confidence            999999999999999999999999999999999999998764


No 91 
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=99.31  E-value=5.4e-12  Score=88.33  Aligned_cols=93  Identities=23%  Similarity=0.339  Sum_probs=85.8

Q ss_pred             CCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHCC
Q 031662           54 QGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACLNGHTEVAKKLVLS-GANISVLNSHEQTPIDEALSRG  132 (155)
Q Consensus        54 ~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~-~~~~~~~~~~~~t~l~~a~~~~  132 (155)
                      .+...+++|++.|++..++.+.-.|.+++.+|...+|+||.|+..|+.+++++|++. +.+++.+|.+|+|||+-|...+
T Consensus       505 ~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F~  584 (622)
T KOG0506|consen  505 DTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHFK  584 (622)
T ss_pred             cchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhcC
Confidence            355679999999999999999888999999999999999999999999999999965 6889999999999999999999


Q ss_pred             CHHHHHHHHHHHhh
Q 031662          133 KMDIIDAINTAVAQ  146 (155)
Q Consensus       133 ~~~~~~~L~~~g~~  146 (155)
                      |.+++++|.+....
T Consensus       585 h~~v~k~L~~~~~~  598 (622)
T KOG0506|consen  585 HKEVVKLLEEAQYP  598 (622)
T ss_pred             cHHHHHHHHHHhcc
Confidence            99999999887653


No 92 
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=99.27  E-value=5.9e-11  Score=83.65  Aligned_cols=90  Identities=29%  Similarity=0.372  Sum_probs=80.6

Q ss_pred             HHHHHHhCCCHHHHHHHHhcCCCCCCCC-CCCCCHHHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHH
Q 031662           58 ALHMASANGHLGIVEYLIGRGVDINASN-EEKNTPLHYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDI  136 (155)
Q Consensus        58 ~l~~a~~~~~~~~~~~ll~~~~~~~~~~-~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~  136 (155)
                      -||-+++.++.+..-.|+..|+++|..+ ..|.||||.|+..|+..-+++|+-+|+++...|.+|.||+.+|...||-++
T Consensus       136 QLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH~~l  215 (669)
T KOG0818|consen  136 QLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGHHEL  215 (669)
T ss_pred             HHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCchHH
Confidence            4888999999998888889999999865 578999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhc
Q 031662          137 IDAINTAVAQL  147 (155)
Q Consensus       137 ~~~L~~~g~~~  147 (155)
                      .+-|++..-++
T Consensus       216 aeRl~e~~y~v  226 (669)
T KOG0818|consen  216 AERLVEIQYEL  226 (669)
T ss_pred             HHHHHHHHHHH
Confidence            99888775443


No 93 
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=99.24  E-value=5.8e-12  Score=93.49  Aligned_cols=99  Identities=22%  Similarity=0.369  Sum_probs=83.7

Q ss_pred             hCCHHHHHHHHH-cCCC-CCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCC-CCCCHHHHHHhcCcHHHHHHHH
Q 031662           32 YDDIEDVISLAS-AGVP-LDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNE-EKNTPLHYACLNGHTEVAKKLV  108 (155)
Q Consensus        32 ~~~~~~v~~ll~-~~~~-~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~-~~~t~l~~a~~~~~~~~~~~Ll  108 (155)
                      ++...-++-++. .+.+ .|.+|..|+++||.++..+...+++||+++|+++..+|. .|.||||-|+..|+++++-.|+
T Consensus        27 Ks~~Nqlk~F~~k~c~n~anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL  106 (1267)
T KOG0783|consen   27 KSEPNQLKGFSEKSCQNLANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLL  106 (1267)
T ss_pred             cCChhHHHHHHHHhhhhhhhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHH
Confidence            344433444444 3333 477899999999999999999999999999999998886 7899999999999999999999


Q ss_pred             HcCCCCcccCCCCCCHHHHHHH
Q 031662          109 LSGANISVLNSHEQTPIDEALS  130 (155)
Q Consensus       109 ~~~~~~~~~~~~~~t~l~~a~~  130 (155)
                      .+|..+.+.|..|..||+..++
T Consensus       107 ~~g~SL~i~Dkeglsplq~~~r  128 (1267)
T KOG0783|consen  107 SKGRSLRIKDKEGLSPLQFLSR  128 (1267)
T ss_pred             hcCCceEEecccCCCHHHHHhh
Confidence            9999999999999999998877


No 94 
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=99.23  E-value=1.2e-10  Score=82.20  Aligned_cols=85  Identities=32%  Similarity=0.452  Sum_probs=79.2

Q ss_pred             HHHHHHHhCCHHHHHHHHHcCCCCCCCCCC-CccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCcHHH
Q 031662           25 ALLAAARYDDIEDVISLASAGVPLDSKDSQ-GRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACLNGHTEV  103 (155)
Q Consensus        25 ~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~  103 (155)
                      .||..++.|+++..--|+..|++.|..+.. |.||||.|++.|+.--+++|+-+|++++.+|..|+||+.+|-..|+.++
T Consensus       136 QLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH~~l  215 (669)
T KOG0818|consen  136 QLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGHHEL  215 (669)
T ss_pred             HHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCchHH
Confidence            489999999999999999999999988765 9999999999999999999999999999999999999999999999887


Q ss_pred             HHHHHH
Q 031662          104 AKKLVL  109 (155)
Q Consensus       104 ~~~Ll~  109 (155)
                      .+-|++
T Consensus       216 aeRl~e  221 (669)
T KOG0818|consen  216 AERLVE  221 (669)
T ss_pred             HHHHHH
Confidence            776665


No 95 
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=99.18  E-value=1.7e-10  Score=82.70  Aligned_cols=90  Identities=32%  Similarity=0.444  Sum_probs=68.6

Q ss_pred             HHHHHHHhCCHHHHHHHHHcCCCC----CCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCc
Q 031662           25 ALLAAARYDDIEDVISLASAGVPL----DSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACLNGH  100 (155)
Q Consensus        25 ~l~~A~~~~~~~~v~~ll~~~~~~----~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~~~  100 (155)
                      .|..|+...++..+-.|+.+|...    ...+.+|.|+||+||+.++..+.++|+-+|+++..+|..|+|+|++|-+.|.
T Consensus       627 qLl~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a~s  706 (749)
T KOG0705|consen  627 QLLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQAGS  706 (749)
T ss_pred             HHHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhccc
Confidence            466677777788888888876432    2345667888888888888888888888888888888888888888888888


Q ss_pred             HHHHHHHHHcCCCC
Q 031662          101 TEVAKKLVLSGANI  114 (155)
Q Consensus       101 ~~~~~~Ll~~~~~~  114 (155)
                      -+|++.|+++|+..
T Consensus       707 qec~d~llq~gcp~  720 (749)
T KOG0705|consen  707 QECIDVLLQYGCPD  720 (749)
T ss_pred             HHHHHHHHHcCCCc
Confidence            88888888887653


No 96 
>PF13606 Ank_3:  Ankyrin repeat
Probab=99.16  E-value=3.8e-11  Score=53.53  Aligned_cols=29  Identities=24%  Similarity=0.402  Sum_probs=19.0

Q ss_pred             CCCCHHHHHHHCCCHHHHHHHHHHHhhcc
Q 031662          120 HEQTPIDEALSRGKMDIIDAINTAVAQLE  148 (155)
Q Consensus       120 ~~~t~l~~a~~~~~~~~~~~L~~~g~~~~  148 (155)
                      +|+||||+|+..|+.+++++|+++|+|++
T Consensus         1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn   29 (30)
T PF13606_consen    1 NGNTPLHLAASNGNIEIVKYLLEHGADVN   29 (30)
T ss_pred             CCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence            35666666666666666666666666654


No 97 
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.13  E-value=6.1e-10  Score=83.00  Aligned_cols=126  Identities=21%  Similarity=0.229  Sum_probs=104.6

Q ss_pred             CcccHHHHHHHHHhCCHHHHHHHHHcC----CCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHH
Q 031662           19 SPENIDALLAAARYDDIEDVISLASAG----VPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHY   94 (155)
Q Consensus        19 ~~~~~~~l~~A~~~~~~~~v~~ll~~~----~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~   94 (155)
                      ...+.-.+..|++.|+.-.|+..++..    .++|..|..|.++++.|+...+.++.++|++....+       ..+|.+
T Consensus        22 l~~~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~-------gdALL~   94 (822)
T KOG3609|consen   22 LNEGEKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE-------GDALLL   94 (822)
T ss_pred             cchhhHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc-------chHHHH
Confidence            344555678999999999999988854    467889999999999999999999999999986554       338999


Q ss_pred             HHhcCcHHHHHHHHHcCCCC----------cccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccCC
Q 031662           95 ACLNGHTEVAKKLVLSGANI----------SVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELGG  151 (155)
Q Consensus        95 a~~~~~~~~~~~Ll~~~~~~----------~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~  151 (155)
                      |+..|..+.++.++.+-...          ...-..+.||+.+|+..+++||++.|+++|+++..+.
T Consensus        95 aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~~PH  161 (822)
T KOG3609|consen   95 AIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIPIPH  161 (822)
T ss_pred             HHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCCCCc
Confidence            99999999999999763221          1233456899999999999999999999999987654


No 98 
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.09  E-value=6.6e-10  Score=78.95  Aligned_cols=86  Identities=30%  Similarity=0.409  Sum_probs=55.4

Q ss_pred             HHHHHHhCCCHHHHHHHHh--cCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHH
Q 031662           58 ALHMASANGHLGIVEYLIG--RGVDINASNEEKNTPLHYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMD  135 (155)
Q Consensus        58 ~l~~a~~~~~~~~~~~ll~--~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~  135 (155)
                      ++|+++.....+-+...+.  ....++.+|..|.||||+|+..|+.+.++.|+..|+++..++..||+||+.|+..|+.+
T Consensus        23 ~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~q  102 (560)
T KOG0522|consen   23 PLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNEQ  102 (560)
T ss_pred             ccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCHH
Confidence            4666666665544333222  23456666667777777777777777777777777777777777777777777777766


Q ss_pred             HHHHHHHH
Q 031662          136 IIDAINTA  143 (155)
Q Consensus       136 ~~~~L~~~  143 (155)
                      ++.-++.+
T Consensus       103 ~i~~vlr~  110 (560)
T KOG0522|consen  103 IITEVLRH  110 (560)
T ss_pred             HHHHHHHH
Confidence            66555544


No 99 
>PF13606 Ank_3:  Ankyrin repeat
Probab=99.09  E-value=2.4e-10  Score=50.91  Aligned_cols=28  Identities=46%  Similarity=0.720  Sum_probs=19.5

Q ss_pred             CCCHHHHHHhcCcHHHHHHHHHcCCCCc
Q 031662           88 KNTPLHYACLNGHTEVAKKLVLSGANIS  115 (155)
Q Consensus        88 ~~t~l~~a~~~~~~~~~~~Ll~~~~~~~  115 (155)
                      |+||||+|+..|+.+++++|+++|++++
T Consensus         2 G~T~Lh~A~~~g~~e~v~~Ll~~gadvn   29 (30)
T PF13606_consen    2 GNTPLHLAASNGNIEIVKYLLEHGADVN   29 (30)
T ss_pred             CCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence            5677777777777777777777766665


No 100
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=99.05  E-value=8.5e-10  Score=79.21  Aligned_cols=91  Identities=23%  Similarity=0.262  Sum_probs=78.5

Q ss_pred             HHHHHhCCCHHHHHHHHhcCCCCCC----CCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCH
Q 031662           59 LHMASANGHLGIVEYLIGRGVDINA----SNEEKNTPLHYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKM  134 (155)
Q Consensus        59 l~~a~~~~~~~~~~~ll~~~~~~~~----~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~  134 (155)
                      |.-|+...+...+-.|+.+|.....    -+..|+|+||+|+..|+..+.++|+=+|+++..+|..|.|+|.+|...|..
T Consensus       628 Ll~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a~sq  707 (749)
T KOG0705|consen  628 LLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQAGSQ  707 (749)
T ss_pred             HHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhcccH
Confidence            4556666778888888888755332    345779999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhccc
Q 031662          135 DIIDAINTAVAQLEL  149 (155)
Q Consensus       135 ~~~~~L~~~g~~~~~  149 (155)
                      +|+.+|+.+|+..+-
T Consensus       708 ec~d~llq~gcp~e~  722 (749)
T KOG0705|consen  708 ECIDVLLQYGCPDEC  722 (749)
T ss_pred             HHHHHHHHcCCCccc
Confidence            999999999987653


No 101
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=99.03  E-value=1.6e-10  Score=86.05  Aligned_cols=82  Identities=22%  Similarity=0.275  Sum_probs=76.4

Q ss_pred             cCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCC-CccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHH
Q 031662           16 ETSSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQ-GRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHY   94 (155)
Q Consensus        16 ~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~   94 (155)
                      +..+..|.++||+++..+..+++++|+++|.++..+|.. |+|+||-|+++|+++++-.|+.+|.....+|+.|..||..
T Consensus        46 nikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dkeglsplq~  125 (1267)
T KOG0783|consen   46 NIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKEGLSPLQF  125 (1267)
T ss_pred             hHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEEecccCCCHHHH
Confidence            455678999999999999999999999999999999976 9999999999999999999999999999999999999988


Q ss_pred             HHh
Q 031662           95 ACL   97 (155)
Q Consensus        95 a~~   97 (155)
                      -++
T Consensus       126 ~~r  128 (1267)
T KOG0783|consen  126 LSR  128 (1267)
T ss_pred             Hhh
Confidence            665


No 102
>PF00023 Ank:  Ankyrin repeat Hereditary spherocytosis;  InterPro: IPR002110  The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=99.03  E-value=6.9e-10  Score=50.74  Aligned_cols=28  Identities=50%  Similarity=0.865  Sum_probs=11.6

Q ss_pred             CCHHHHHHhcCcHHHHHHHHHcCCCCcc
Q 031662           89 NTPLHYACLNGHTEVAKKLVLSGANISV  116 (155)
Q Consensus        89 ~t~l~~a~~~~~~~~~~~Ll~~~~~~~~  116 (155)
                      .||||+|+..++.+++++|+++|++++.
T Consensus         3 ~TpLh~A~~~~~~~~v~~Ll~~ga~~~~   30 (33)
T PF00023_consen    3 NTPLHYAAQRGHPDIVKLLLKHGADINA   30 (33)
T ss_dssp             BBHHHHHHHTTCHHHHHHHHHTTSCTTC
T ss_pred             ccHHHHHHHHHHHHHHHHHHHCcCCCCC
Confidence            3444444444444444444444444433


No 103
>PF00023 Ank:  Ankyrin repeat Hereditary spherocytosis;  InterPro: IPR002110  The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=99.00  E-value=1.1e-09  Score=50.04  Aligned_cols=31  Identities=48%  Similarity=0.774  Sum_probs=21.4

Q ss_pred             CccHHHHHHhCCCHHHHHHHHhcCCCCCCCC
Q 031662           55 GRTALHMASANGHLGIVEYLIGRGVDINASN   85 (155)
Q Consensus        55 ~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~   85 (155)
                      |.||||+|+..++.+++++|+++|++++.+|
T Consensus         2 G~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d   32 (33)
T PF00023_consen    2 GNTPLHYAAQRGHPDIVKLLLKHGADINARD   32 (33)
T ss_dssp             SBBHHHHHHHTTCHHHHHHHHHTTSCTTCBC
T ss_pred             cccHHHHHHHHHHHHHHHHHHHCcCCCCCCC
Confidence            5667777777777777777777777666654


No 104
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.87  E-value=4.9e-09  Score=75.61  Aligned_cols=94  Identities=26%  Similarity=0.345  Sum_probs=85.5

Q ss_pred             CCCcccHHHHHHHHHhCCHHHHHHHHHcCCC--CCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHH
Q 031662           17 TSSPENIDALLAAARYDDIEDVISLASAGVP--LDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHY   94 (155)
Q Consensus        17 ~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~--~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~   94 (155)
                      .+..+..+.||+|++.|+-++|+|++++++.  ++..+..|.|+||.|+..++..++++|++.|+.....|..|.||-.-
T Consensus       894 ~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~~lvdagasl~ktd~kg~tp~er  973 (1004)
T KOG0782|consen  894 IQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQLLVDAGASLRKTDSKGKTPQER  973 (1004)
T ss_pred             eeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcchhheecccCCCChHHH
Confidence            3456778999999999999999999999863  46678899999999999999999999999999999999999999999


Q ss_pred             HHhcCcHHHHHHHHHc
Q 031662           95 ACLNGHTEVAKKLVLS  110 (155)
Q Consensus        95 a~~~~~~~~~~~Ll~~  110 (155)
                      |-..|+.+++.||-.+
T Consensus       974 aqqa~d~dlaayle~r  989 (1004)
T KOG0782|consen  974 AQQAGDPDLAAYLESR  989 (1004)
T ss_pred             HHhcCCchHHHHHhhh
Confidence            9999999999998754


No 105
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.86  E-value=1.3e-08  Score=72.51  Aligned_cols=87  Identities=28%  Similarity=0.417  Sum_probs=74.9

Q ss_pred             HHHHHHHHhCCHHHHHHHHHc--CCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCcH
Q 031662           24 DALLAAARYDDIEDVISLASA--GVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACLNGHT  101 (155)
Q Consensus        24 ~~l~~A~~~~~~~~v~~ll~~--~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~~~~  101 (155)
                      -|+|.+....+.+-+...+..  ...++.+|..|.||||.|+..|+...++.|+..++++..++..|++|||-|+..|+.
T Consensus        22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~  101 (560)
T KOG0522|consen   22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNE  101 (560)
T ss_pred             cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCH
Confidence            458999988888777664443  356778899999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHc
Q 031662          102 EVAKKLVLS  110 (155)
Q Consensus       102 ~~~~~Ll~~  110 (155)
                      +++..++.+
T Consensus       102 q~i~~vlr~  110 (560)
T KOG0522|consen  102 QIITEVLRH  110 (560)
T ss_pred             HHHHHHHHH
Confidence            888777643


No 106
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.85  E-value=4.2e-09  Score=79.94  Aligned_cols=91  Identities=34%  Similarity=0.527  Sum_probs=84.1

Q ss_pred             CCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCC
Q 031662           53 SQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRG  132 (155)
Q Consensus        53 ~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~  132 (155)
                      ..|.+++|.|+.++...+.++|+++|+++|..|..|++|+|.+...|+...+..|+++|++.+..+..+.+|+++|....
T Consensus       654 ~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a~~~~  733 (785)
T KOG0521|consen  654 CIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIAMEAA  733 (785)
T ss_pred             hcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhhHHhhhc
Confidence            45789999999999999999999999999999999999999999999999999999999999999999999999998887


Q ss_pred             CHHHHHHHHHH
Q 031662          133 KMDIIDAINTA  143 (155)
Q Consensus       133 ~~~~~~~L~~~  143 (155)
                      +.+.+-++...
T Consensus       734 ~~d~~~l~~l~  744 (785)
T KOG0521|consen  734 NADIVLLLRLA  744 (785)
T ss_pred             cccHHHHHhhh
Confidence            77777666443


No 107
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=98.83  E-value=1.1e-08  Score=78.00  Aligned_cols=136  Identities=19%  Similarity=0.175  Sum_probs=104.7

Q ss_pred             ccCCCcccHHHHHHHHHhCCHHHHHHHHHc-CCCCCCCCCCCccHHHHHHhCCCHHHHHHH-HhcCCCCCCCCCCCCCHH
Q 031662           15 TETSSPENIDALLAAARYDDIEDVISLASA-GVPLDSKDSQGRTALHMASANGHLGIVEYL-IGRGVDINASNEEKNTPL   92 (155)
Q Consensus        15 ~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~-~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l-l~~~~~~~~~~~~~~t~l   92 (155)
                      .......+++.+|+++..+..-.++.+++- +......|..+...+|+++.. +.++.-.+ .-.|..++.+|..|+|||
T Consensus       567 ~~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hfca~l-g~ewA~ll~~~~~~ai~i~D~~G~tpL  645 (975)
T KOG0520|consen  567 SSSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHFCAAL-GYEWAFLPISADGVAIDIRDRNGWTPL  645 (975)
T ss_pred             cccCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhHhhhc-CCceeEEEEeecccccccccCCCCccc
Confidence            345567889999999999999999999885 554455667777788885544 44443333 345888999999999999


Q ss_pred             HHHHhcCcHHHHHHHHHcCCCC------cccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccCC
Q 031662           93 HYACLNGHTEVAKKLVLSGANI------SVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELGG  151 (155)
Q Consensus        93 ~~a~~~~~~~~~~~Ll~~~~~~------~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~  151 (155)
                      |||+.+|+..++..|++.|++.      ....-.|.|+..+|...|+..+..+|.++.-.....+
T Consensus       646 ~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~~L~~~~~~  710 (975)
T KOG0520|consen  646 HWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEKALSAHLSN  710 (975)
T ss_pred             chHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhhHHHHHHhh
Confidence            9999999999999999877543      3334468899999999999999999988754443333


No 108
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.79  E-value=3.1e-08  Score=68.26  Aligned_cols=71  Identities=24%  Similarity=0.307  Sum_probs=61.9

Q ss_pred             HHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHH
Q 031662           23 IDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLH   93 (155)
Q Consensus        23 ~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~   93 (155)
                      .-.|+.||+.|+++.|++|++.|.++|.+|....+||.+|+..||.+.+++|+++|+--+.-...|...++
T Consensus        37 f~elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~RC~Y  107 (516)
T KOG0511|consen   37 FGELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDGDRCHY  107 (516)
T ss_pred             hHHHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccccCcchhhh
Confidence            45689999999999999999999999999999999999999999999999999999866554455554433


No 109
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.71  E-value=8.4e-08  Score=60.19  Aligned_cols=70  Identities=24%  Similarity=0.339  Sum_probs=57.8

Q ss_pred             CCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcC-CCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCC
Q 031662           45 GVPLDSKDSQGRTALHMASANGHLGIVEYLIGRG-VDINASNEEKNTPLHYACLNGHTEVAKKLVLSGANI  114 (155)
Q Consensus        45 ~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~  114 (155)
                      +.++|.+|..|||+++.|+..+..+.+.||+.+| +.+...|..+.+++.+|-..|..+++..|.+.-.+-
T Consensus         2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~et   72 (223)
T KOG2384|consen    2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRET   72 (223)
T ss_pred             CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhccC
Confidence            4577888888888888888888888888888888 788888888888888888888888888888764443


No 110
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.68  E-value=1.1e-07  Score=65.71  Aligned_cols=67  Identities=33%  Similarity=0.412  Sum_probs=58.3

Q ss_pred             HHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCH
Q 031662           58 ALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACLNGHTEVAKKLVLSGANISVLNSHEQTP  124 (155)
Q Consensus        58 ~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~  124 (155)
                      -|..||+.|+.+.++.|++.|.++|..|.+...||.+|+..|+.+++++|+++|+--.--...|.-+
T Consensus        39 elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~RC  105 (516)
T KOG0511|consen   39 ELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDGDRC  105 (516)
T ss_pred             HHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccccCcchh
Confidence            5789999999999999999999999999999999999999999999999999997544333344444


No 111
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.56  E-value=4e-07  Score=57.23  Aligned_cols=75  Identities=19%  Similarity=0.162  Sum_probs=65.5

Q ss_pred             CCccCCCcccHHHHHHHHHhCCHHHHHHHHHcC-CCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCC
Q 031662           13 QTTETSSPENIDALLAAARYDDIEDVISLASAG-VPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEE   87 (155)
Q Consensus        13 ~~~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~-~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~   87 (155)
                      .+.+..+..|+|++.+|+..|+.+.+.+|+++| +.+...|..+.+.+-+|-+.|..++++.|.+...+-...+..
T Consensus         3 ~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~ets~p~ns   78 (223)
T KOG2384|consen    3 GNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRETSHPMNS   78 (223)
T ss_pred             CCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhccCCCcccC
Confidence            456778899999999999999999999999999 888899999999999999999999999999885555444443


No 112
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.52  E-value=1.2e-07  Score=72.32  Aligned_cols=88  Identities=32%  Similarity=0.384  Sum_probs=80.3

Q ss_pred             cccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcC
Q 031662           20 PENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACLNG   99 (155)
Q Consensus        20 ~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~~   99 (155)
                      ..|.++||.|+..+....+++|++.|.++|..|..|.+|+|.+...|+......++++|++.++.+..|..++.+|....
T Consensus       654 ~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a~~~~  733 (785)
T KOG0521|consen  654 CIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIAMEAA  733 (785)
T ss_pred             hcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhhHHhhhc
Confidence            46689999999999999999999999999999999999999999999999999999999999999999999999998876


Q ss_pred             cHHHHHHH
Q 031662          100 HTEVAKKL  107 (155)
Q Consensus       100 ~~~~~~~L  107 (155)
                      +.+.+-++
T Consensus       734 ~~d~~~l~  741 (785)
T KOG0521|consen  734 NADIVLLL  741 (785)
T ss_pred             cccHHHHH
Confidence            65555443


No 113
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.49  E-value=6.9e-07  Score=67.26  Aligned_cols=105  Identities=23%  Similarity=0.153  Sum_probs=84.8

Q ss_pred             CCccCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCC----------
Q 031662           13 QTTETSSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDIN----------   82 (155)
Q Consensus        13 ~~~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~----------   82 (155)
                      -+.+..+.-|.++|++|+...+.+++++|++.....       ..+|.+|+..+..+.++.++.+-....          
T Consensus        53 lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~-------gdALL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~  125 (822)
T KOG3609|consen   53 LNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE-------GDALLLAIAVGSVPLVELLLVHFVDAPYLERSGDANS  125 (822)
T ss_pred             cchhccChHhhhceecccccccHHHHHHHhcCcccc-------chHHHHHHHHHHHHHHHHHHhcccccchhccccccCc
Confidence            456778899999999999999999999999987654       248999999999999999998632221          


Q ss_pred             CCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCH
Q 031662           83 ASNEEKNTPLHYACLNGHTEVAKKLVLSGANISVLNSHEQTP  124 (155)
Q Consensus        83 ~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~  124 (155)
                      ..-....||+.+||..++.|+++.|+++|+.+..+......+
T Consensus       126 ~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~~PH~~~C~C  167 (822)
T KOG3609|consen  126 PHFTPDITPLMLAAHLNNFEILQCLLTRGHCIPIPHDIRCEC  167 (822)
T ss_pred             ccCCCCccHHHHHHHhcchHHHHHHHHcCCCCCCCcccccCc
Confidence            112345699999999999999999999999887665544333


No 114
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=98.32  E-value=4e-07  Score=69.77  Aligned_cols=98  Identities=15%  Similarity=0.149  Sum_probs=77.9

Q ss_pred             CCCCCccHHHHHHhCCCHHHHHHHHhc-CCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Q 031662           51 KDSQGRTALHMASANGHLGIVEYLIGR-GVDINASNEEKNTPLHYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEAL  129 (155)
Q Consensus        51 ~~~~~~~~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~  129 (155)
                      ....|.+.+|+++..+...+++.+++- +......|..+...+|+|+..|..-.+....-.|..++++|..||||||+|.
T Consensus       570 ~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hfca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~wAa  649 (975)
T KOG0520|consen  570 VNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHFCAALGYEWAFLPISADGVAIDIRDRNGWTPLHWAA  649 (975)
T ss_pred             CCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhHhhhcCCceeEEEEeecccccccccCCCCcccchHh
Confidence            445678999999999999899988885 5555566777888888866555433333333568889999999999999999


Q ss_pred             HCCCHHHHHHHHHHHhhcc
Q 031662          130 SRGKMDIIDAINTAVAQLE  148 (155)
Q Consensus       130 ~~~~~~~~~~L~~~g~~~~  148 (155)
                      ..|+..++.-|..-|++-.
T Consensus       650 ~~G~e~l~a~l~~lga~~~  668 (975)
T KOG0520|consen  650 FRGREKLVASLIELGADPG  668 (975)
T ss_pred             hcCHHHHHHHHHHhccccc
Confidence            9999999999998877643


No 115
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.89  E-value=5.5e-05  Score=54.35  Aligned_cols=71  Identities=21%  Similarity=0.203  Sum_probs=55.3

Q ss_pred             HHHHHHHHhcCCCCCC------CCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHH
Q 031662           68 LGIVEYLIGRGVDINA------SNEEKNTPLHYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAIN  141 (155)
Q Consensus        68 ~~~~~~ll~~~~~~~~------~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~  141 (155)
                      ...+++|.+++.+.|.      .+.--.|+||+|+..|..+++.+|++.|+|+...|..|.||+.++.   +.++=..++
T Consensus       404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~---nkdVk~~F~  480 (591)
T KOG2505|consen  404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA---NKDVKSIFI  480 (591)
T ss_pred             hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc---cHHHHHHHH
Confidence            5678888888766643      2344568999999999999999999999999999999999998776   344444444


No 116
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.78  E-value=7.3e-05  Score=53.77  Aligned_cols=66  Identities=21%  Similarity=0.285  Sum_probs=55.0

Q ss_pred             CCHHHHHHHHHcCCCCCC------CCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhc
Q 031662           33 DDIEDVISLASAGVPLDS------KDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACLN   98 (155)
Q Consensus        33 ~~~~~v~~ll~~~~~~~~------~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~   98 (155)
                      .-...+++|.+++...|.      .+..-.|+||+|+..+..+++.++++.|+|+..+|..|+||+.++...
T Consensus       402 ~~p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~nk  473 (591)
T KOG2505|consen  402 PEPDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSANK  473 (591)
T ss_pred             CchhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccccH
Confidence            446778888888765543      344467999999999999999999999999999999999999998733


No 117
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=97.68  E-value=7.6e-05  Score=31.79  Aligned_cols=25  Identities=20%  Similarity=0.399  Sum_probs=12.5

Q ss_pred             CCCHHHHHHHCCCHHHHHHHHHHHh
Q 031662          121 EQTPIDEALSRGKMDIIDAINTAVA  145 (155)
Q Consensus       121 ~~t~l~~a~~~~~~~~~~~L~~~g~  145 (155)
                      +.||+++++..++.++++.|+++|.
T Consensus         2 ~~~~l~~~~~~~~~~~~~~ll~~~~   26 (30)
T smart00248        2 GRTPLHLAAENGNLEVVKLLLDKGA   26 (30)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCC
Confidence            3445555555555555555554444


No 118
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=97.58  E-value=0.00022  Score=30.25  Aligned_cols=26  Identities=50%  Similarity=0.654  Sum_probs=14.5

Q ss_pred             CCCHHHHHHhcCcHHHHHHHHHcCCC
Q 031662           88 KNTPLHYACLNGHTEVAKKLVLSGAN  113 (155)
Q Consensus        88 ~~t~l~~a~~~~~~~~~~~Ll~~~~~  113 (155)
                      +.+|+++++..++.++++.|++.+.+
T Consensus         2 ~~~~l~~~~~~~~~~~~~~ll~~~~~   27 (30)
T smart00248        2 GRTPLHLAAENGNLEVVKLLLDKGAD   27 (30)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            34555555555555555555555443


No 119
>PF06128 Shigella_OspC:  Shigella flexneri OspC protein;  InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=97.40  E-value=0.0018  Score=42.37  Aligned_cols=114  Identities=13%  Similarity=0.165  Sum_probs=76.9

Q ss_pred             HHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCH------HHHHHhcC
Q 031662           26 LLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTP------LHYACLNG   99 (155)
Q Consensus        26 l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~------l~~a~~~~   99 (155)
                      |--|+...+.+.+..++....+       -.+++.++...+..+++-+|+..- ....+|-....+      ..+....-
T Consensus       157 ledAV~AsN~~~i~~~VtdKkd-------A~~Am~~si~~~K~dva~~lls~f-~ft~~dv~~~~~~~ydieY~LS~h~a  228 (284)
T PF06128_consen  157 LEDAVKASNYEEISNLVTDKKD-------AHQAMWLSIGNAKEDVALYLLSKF-NFTKQDVASMEKELYDIEYLLSEHSA  228 (284)
T ss_pred             HHHHHhhcCHHHHHHHhcchHH-------HHHHHHHHhcccHHHHHHHHHhhc-ceecchhhhcCcchhhHHHHHhhcCC
Confidence            5667777777777666554321       245777888777788888888641 222222211111      22233445


Q ss_pred             cHHHHHHHHHcC-CCCcc---cCCCCCCHHHHHHHCCCHHHHHHHHHHHhhc
Q 031662          100 HTEVAKKLVLSG-ANISV---LNSHEQTPIDEALSRGKMDIIDAINTAVAQL  147 (155)
Q Consensus       100 ~~~~~~~Ll~~~-~~~~~---~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~  147 (155)
                      +..++++++++| +++|.   +-+.|.|.|+-|++.++.+++.+|+.+|+-.
T Consensus       229 ~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA~~  280 (284)
T PF06128_consen  229 SYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGAIS  280 (284)
T ss_pred             cHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCccc
Confidence            677889999888 55543   4678999999999999999999999999843


No 120
>PF03158 DUF249:  Multigene family 530 protein;  InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=97.01  E-value=0.01  Score=37.75  Aligned_cols=46  Identities=17%  Similarity=0.235  Sum_probs=35.7

Q ss_pred             HHHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHH
Q 031662           91 PLHYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINT  142 (155)
Q Consensus        91 ~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~  142 (155)
                      -|.+|+..|-.+++--.+++|.+++.      +.|..|+...+-.++.+++.
T Consensus       146 hl~~a~~kgll~F~letlkygg~~~~------~vls~Av~ynhRkIL~yfi~  191 (192)
T PF03158_consen  146 HLEKAAAKGLLPFVLETLKYGGNVDI------IVLSQAVKYNHRKILDYFIR  191 (192)
T ss_pred             HHHHHHHCCCHHHHHHHHHcCCcccH------HHHHHHHHhhHHHHHHHhhc
Confidence            35678888888888888888877663      68888888888888887764


No 121
>PF06128 Shigella_OspC:  Shigella flexneri OspC protein;  InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=96.42  E-value=0.041  Score=36.30  Aligned_cols=94  Identities=20%  Similarity=0.223  Sum_probs=67.8

Q ss_pred             cccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCC----CCCccHHHHHHh--CCCHHHHHHHHhcC-CCCCC---CCCCCC
Q 031662           20 PENIDALLAAARYDDIEDVISLASAGVPLDSKD----SQGRTALHMASA--NGHLGIVEYLIGRG-VDINA---SNEEKN   89 (155)
Q Consensus        20 ~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~----~~~~~~l~~a~~--~~~~~~~~~ll~~~-~~~~~---~~~~~~   89 (155)
                      ..-.++|-.++.++..+++.+|+++- +.+..|    ..+..-+.|+..  ..+..+++.++.+| +++|.   +-..|.
T Consensus       177 kdA~~Am~~si~~~K~dva~~lls~f-~ft~~dv~~~~~~~ydieY~LS~h~a~~kvL~~Fi~~Glv~vN~~F~~~NSGd  255 (284)
T PF06128_consen  177 KDAHQAMWLSIGNAKEDVALYLLSKF-NFTKQDVASMEKELYDIEYLLSEHSASYKVLEYFINRGLVDVNKKFQKVNSGD  255 (284)
T ss_pred             HHHHHHHHHHhcccHHHHHHHHHhhc-ceecchhhhcCcchhhHHHHHhhcCCcHHHHHHHHhccccccchhhhccCCcc
Confidence            34567888899889999999998863 111111    122234455443  34678899999987 55664   356899


Q ss_pred             CHHHHHHhcCcHHHHHHHHHcCCCC
Q 031662           90 TPLHYACLNGHTEVAKKLVLSGANI  114 (155)
Q Consensus        90 t~l~~a~~~~~~~~~~~Ll~~~~~~  114 (155)
                      |.|.-|...++.+++.+|+++|+-.
T Consensus       256 tMLDNA~Ky~~~emi~~Llk~GA~~  280 (284)
T PF06128_consen  256 TMLDNAMKYKNSEMIAFLLKYGAIS  280 (284)
T ss_pred             hHHHhHHhcCcHHHHHHHHHcCccc
Confidence            9999999999999999999999843


No 122
>PF11929 DUF3447:  Domain of unknown function (DUF3447);  InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=95.53  E-value=0.039  Score=29.99  Aligned_cols=47  Identities=23%  Similarity=0.352  Sum_probs=34.3

Q ss_pred             cHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHc
Q 031662           57 TALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACLNGHTEVAKKLVLS  110 (155)
Q Consensus        57 ~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~  110 (155)
                      ..+..|+..|+.++++.+++.+ .++      ...+..|+...+-+++++|++.
T Consensus         8 ~tl~~Ai~GGN~eII~~c~~~~-~~~------~~~l~~AI~~H~n~i~~~l~~~   54 (76)
T PF11929_consen    8 KTLEYAIIGGNFEIINICLKKN-KPD------NDCLEYAIKSHNNEIADWLIEN   54 (76)
T ss_pred             HHHHHHHhCCCHHHHHHHHHHh-ccH------HHHHHHHHHHhhHHHHHHHHHh
Confidence            4577888888888888887654 121      3467888888888888888865


No 123
>PF11929 DUF3447:  Domain of unknown function (DUF3447);  InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=94.69  E-value=0.13  Score=27.90  Aligned_cols=48  Identities=19%  Similarity=0.103  Sum_probs=39.8

Q ss_pred             HHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhc
Q 031662           23 IDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGR   77 (155)
Q Consensus        23 ~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~   77 (155)
                      ...+..|+..|+.++++.+++.+ .++      ...+..|+..-+-++++||++.
T Consensus         7 ~~tl~~Ai~GGN~eII~~c~~~~-~~~------~~~l~~AI~~H~n~i~~~l~~~   54 (76)
T PF11929_consen    7 KKTLEYAIIGGNFEIINICLKKN-KPD------NDCLEYAIKSHNNEIADWLIEN   54 (76)
T ss_pred             HHHHHHHHhCCCHHHHHHHHHHh-ccH------HHHHHHHHHHhhHHHHHHHHHh
Confidence            34589999999999999999765 221      3479999999999999999986


No 124
>PF03158 DUF249:  Multigene family 530 protein;  InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=90.88  E-value=0.72  Score=29.63  Aligned_cols=81  Identities=19%  Similarity=0.119  Sum_probs=52.1

Q ss_pred             HHHHHHHHHhCCHHHHHH----HHHcCCCCCCCCCC--CccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHH
Q 031662           23 IDALLAAARYDDIEDVIS----LASAGVPLDSKDSQ--GRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYAC   96 (155)
Q Consensus        23 ~~~l~~A~~~~~~~~v~~----ll~~~~~~~~~~~~--~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~   96 (155)
                      .+.+-+|....+++....    ++.....-...|..  -..-|..|+..|-...+...+++|.+++.      +++..|+
T Consensus       105 ~~iFdIA~~~kDlsLyslGY~l~~~~~~~~~~~d~~~ll~~hl~~a~~kgll~F~letlkygg~~~~------~vls~Av  178 (192)
T PF03158_consen  105 EDIFDIAFAKKDLSLYSLGYKLLFNRMMSEHNEDPTSLLTQHLEKAAAKGLLPFVLETLKYGGNVDI------IVLSQAV  178 (192)
T ss_pred             hhhhhhhhhccchhHHHHHHHHHHhhcccccccCHHHHHHHHHHHHHHCCCHHHHHHHHHcCCcccH------HHHHHHH
Confidence            345677888888766543    34433222112211  12346678888888888888888876653      5888888


Q ss_pred             hcCcHHHHHHHHH
Q 031662           97 LNGHTEVAKKLVL  109 (155)
Q Consensus        97 ~~~~~~~~~~Ll~  109 (155)
                      ..++..++.+++.
T Consensus       179 ~ynhRkIL~yfi~  191 (192)
T PF03158_consen  179 KYNHRKILDYFIR  191 (192)
T ss_pred             HhhHHHHHHHhhc
Confidence            8888888887763


No 125
>KOG1709 consensus Guanidinoacetate methyltransferase and related proteins [Amino acid transport and metabolism]
Probab=55.10  E-value=15  Score=24.68  Aligned_cols=42  Identities=19%  Similarity=0.200  Sum_probs=35.0

Q ss_pred             HHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCC
Q 031662           41 LASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDIN   82 (155)
Q Consensus        41 ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~   82 (155)
                      |++.|+..|..|....|+=.+|.+.++..+.+.|++.|+...
T Consensus         1 lle~ga~wn~id~~n~t~gd~a~ern~~rly~~lv~~gv~Se   42 (271)
T KOG1709|consen    1 LLEYGAGWNFIDYENKTVGDLALERNQSRLYRRLVEAGVPSE   42 (271)
T ss_pred             CcccCCCccccChhhCCchHHHHHccHHHHHHHHHHcCCchh
Confidence            356788888889888999899999999999999998886543


No 126
>KOG1709 consensus Guanidinoacetate methyltransferase and related proteins [Amino acid transport and metabolism]
Probab=51.00  E-value=19  Score=24.30  Aligned_cols=39  Identities=21%  Similarity=-0.003  Sum_probs=29.9

Q ss_pred             ccCCCccCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCC
Q 031662           10 NRTQTTETSSPENIDALLAAARYDDIEDVISLASAGVPL   48 (155)
Q Consensus        10 ~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~   48 (155)
                      ..|...+..+....|+=.+|.+.++.+..+.|++.|+..
T Consensus         3 e~ga~wn~id~~n~t~gd~a~ern~~rly~~lv~~gv~S   41 (271)
T KOG1709|consen    3 EYGAGWNFIDYENKTVGDLALERNQSRLYRRLVEAGVPS   41 (271)
T ss_pred             ccCCCccccChhhCCchHHHHHccHHHHHHHHHHcCCch
Confidence            345555566667777778899999999999999998653


No 127
>PF04053 Coatomer_WDAD:  Coatomer WD associated region ;  InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits.  This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=48.22  E-value=28  Score=26.02  Aligned_cols=105  Identities=14%  Similarity=0.095  Sum_probs=55.1

Q ss_pred             HHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCcc-HHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCcHH
Q 031662           24 DALLAAARYDDIEDVISLASAGVPLDSKDSQGRT-ALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACLNGHTE  102 (155)
Q Consensus        24 ~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~-~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~~~~~  102 (155)
                      +-+.+|.+.|+++.+..+.+.-.+.     ..|. .-..|...|+.++++....+..+.       ...+.+....|+.+
T Consensus       323 ~rFeLAl~lg~L~~A~~~a~~~~~~-----~~W~~Lg~~AL~~g~~~lAe~c~~k~~d~-------~~L~lLy~~~g~~~  390 (443)
T PF04053_consen  323 HRFELALQLGNLDIALEIAKELDDP-----EKWKQLGDEALRQGNIELAEECYQKAKDF-------SGLLLLYSSTGDRE  390 (443)
T ss_dssp             HHHHHHHHCT-HHHHHHHCCCCSTH-----HHHHHHHHHHHHTTBHHHHHHHHHHCT-H-------HHHHHHHHHCT-HH
T ss_pred             HHhHHHHhcCCHHHHHHHHHhcCcH-----HHHHHHHHHHHHcCCHHHHHHHHHhhcCc-------cccHHHHHHhCCHH
Confidence            3356677777776666655443211     1122 223456777888777777664322       23455666777777


Q ss_pred             HHHHHHHcCCCCcccCCCCCCHHHHHHHCCC-HHHHHHHHHHH
Q 031662          103 VAKKLVLSGANISVLNSHEQTPIDEALSRGK-MDIIDAINTAV  144 (155)
Q Consensus       103 ~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~-~~~~~~L~~~g  144 (155)
                      -++.|.+.    .....+-...++.+...|. .+++++|.+.|
T Consensus       391 ~L~kl~~~----a~~~~~~n~af~~~~~lgd~~~cv~lL~~~~  429 (443)
T PF04053_consen  391 KLSKLAKI----AEERGDINIAFQAALLLGDVEECVDLLIETG  429 (443)
T ss_dssp             HHHHHHHH----HHHTT-HHHHHHHHHHHT-HHHHHHHHHHTT
T ss_pred             HHHHHHHH----HHHccCHHHHHHHHHHcCCHHHHHHHHHHcC
Confidence            76666542    1111112335566666666 45778777765


No 128
>KOG3438 consensus DNA-directed RNA polymerase, subunit L [Transcription]
Probab=46.84  E-value=9.3  Score=22.01  Aligned_cols=21  Identities=14%  Similarity=0.381  Sum_probs=17.8

Q ss_pred             HHHHHHHHHHhhcccCCCccC
Q 031662          135 DIIDAINTAVAQLELGGFTVS  155 (155)
Q Consensus       135 ~~~~~L~~~g~~~~~~~~~~~  155 (155)
                      .-++|.+.++..+++.+||+|
T Consensus        31 NalR~vI~k~peVefcGYtIP   51 (105)
T KOG3438|consen   31 NALRYVIMKNPEVEFCGYTIP   51 (105)
T ss_pred             HHHHHHHhcCCceEEEeccCC
Confidence            456888888999999999987


No 129
>PF12645 HTH_16:  Helix-turn-helix domain;  InterPro: IPR024760 This domain appears to be a helix-turn-helix domain, suggesting a transcriptional regulatory protein. Some proteins with this domain are annotated as conjugative transposon proteins.
Probab=42.52  E-value=38  Score=17.73  Aligned_cols=19  Identities=21%  Similarity=0.274  Sum_probs=13.7

Q ss_pred             HHHHHHhCCHHHHHHHHHc
Q 031662           26 LLAAARYDDIEDVISLASA   44 (155)
Q Consensus        26 l~~A~~~~~~~~v~~ll~~   44 (155)
                      +..+|..|+.+.+..++++
T Consensus         3 vI~~A~~GD~~A~~~IL~~   21 (65)
T PF12645_consen    3 VIKAAKQGDPEAMEEILKH   21 (65)
T ss_pred             HHHHHHcCCHHHHHHHHHH
Confidence            4567777888877777764


No 130
>KOG3836 consensus HLH transcription factor EBF/Olf-1 and related DNA binding proteins [Transcription]
Probab=41.57  E-value=7.5  Score=29.85  Aligned_cols=50  Identities=26%  Similarity=0.345  Sum_probs=35.0

Q ss_pred             HHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcC
Q 031662           29 AARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRG   78 (155)
Q Consensus        29 A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~   78 (155)
                      |+..+....+-.+++.+...+..|..+.+|+|+++..++.++++.++...
T Consensus       403 ~~~~~~ss~v~~lik~~~~~~~~d~f~~~p~~~~~~sgdp~~~~~~~~~~  452 (605)
T KOG3836|consen  403 AALNNSSSLVFTLIKKGAHPNDDDKFGFTPLHIPQISGDPRIIQLLLNCK  452 (605)
T ss_pred             hhhcCCccceeeeecccCccchhcccccccccccCCCCCHHHhhhhhhhh
Confidence            33444444555566677777778888888888888888888877776543


No 131
>TIGR03774 RPE2 Rickettsial palindromic element RPE2 domain. This model describes protein translations of a second family, RPE2, of Rickettsia palindromic elements (RPE). The elements spread within a genome as selfish genetic elements, inserting into genes additional coding regions that does not disrupt the reading frame. This model finds RPE-encoded regions in several Rickettsial species and, so far, no where else.
Probab=40.96  E-value=21  Score=15.96  Aligned_cols=16  Identities=38%  Similarity=0.586  Sum_probs=11.8

Q ss_pred             CCCCCcccccCCCccC
Q 031662            2 EQDADPSINRTQTTET   17 (155)
Q Consensus         2 ~~~~~~~~~~~~~~~~   17 (155)
                      |+||.|..++....+.
T Consensus        11 e~gakPItnrraTsd~   26 (35)
T TIGR03774        11 ERGAKPITNRRATSDD   26 (35)
T ss_pred             ccCCcccccccccccc
Confidence            6888898887765543


No 132
>KOG3836 consensus HLH transcription factor EBF/Olf-1 and related DNA binding proteins [Transcription]
Probab=32.30  E-value=12  Score=28.83  Aligned_cols=43  Identities=26%  Similarity=0.352  Sum_probs=32.8

Q ss_pred             HHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHc
Q 031662           68 LGIVEYLIGRGVDINASNEEKNTPLHYACLNGHTEVAKKLVLS  110 (155)
Q Consensus        68 ~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~  110 (155)
                      ...+-.+.+.+...+.+|..+.+|+|+++..|..++.+.++..
T Consensus       409 ss~v~~lik~~~~~~~~d~f~~~p~~~~~~sgdp~~~~~~~~~  451 (605)
T KOG3836|consen  409 SSLVFTLIKKGAHPNDDDKFGFTPLHIPQISGDPRIIQLLLNC  451 (605)
T ss_pred             ccceeeeecccCccchhcccccccccccCCCCCHHHhhhhhhh
Confidence            3344445566777888888999999999999999888877754


No 133
>PF10683 DBD_Tnp_Hermes:  Hermes transposase DNA-binding domain  ;  InterPro: IPR018473 This domain confers specific DNA-binding on Hermes transposase [].; PDB: 2BW3_B.
Probab=27.61  E-value=13  Score=19.60  Aligned_cols=24  Identities=13%  Similarity=0.091  Sum_probs=16.2

Q ss_pred             HHHHHHHCCCHHHHHHHHHHHhhc
Q 031662          124 PIDEALSRGKMDIIDAINTAVAQL  147 (155)
Q Consensus       124 ~l~~a~~~~~~~~~~~L~~~g~~~  147 (155)
                      |+.+....|..+++++|++-|+..
T Consensus        30 pfsiv~gsGfk~la~~li~IGA~y   53 (68)
T PF10683_consen   30 PFSIVSGSGFKKLAQFLINIGATY   53 (68)
T ss_dssp             -GGGGG-HHHHHHHHHHHHHHHHH
T ss_pred             cceeeccccHHHHHHHHHHHhHHh
Confidence            444555567788889998888765


No 134
>PF01671 ASFV_360:  African swine fever virus multigene family 360 protein;  InterPro: IPR002595 The multigene family 360 protein are found within the African swine fever virus (ASFV) genome which consist of dsDNA and has similar structural features to the poxviruses []. The biological function of this family is not known [], although Q65137 from SWISSPROT is a major structural protein [].; GO: 0042330 taxis
Probab=27.19  E-value=1.7e+02  Score=19.63  Aligned_cols=39  Identities=15%  Similarity=-0.019  Sum_probs=27.3

Q ss_pred             HHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHH
Q 031662           28 AAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVE   72 (155)
Q Consensus        28 ~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~   72 (155)
                      .|++.+-.+.++++-++-.+++.+      -|..|..++++--+.
T Consensus        91 ~Av~ynL~~AI~Yfyq~y~hl~~W------RL~CaL~fNnvfdlH  129 (215)
T PF01671_consen   91 IAVQYNLKEAIQYFYQKYPHLNDW------RLICALYFNNVFDLH  129 (215)
T ss_pred             HHHHhhhHHHHHHHHHhccchhhH------HHHHHHHhCCHHHHH
Confidence            688899999999999987765432      456666666654333


No 135
>PF04840 Vps16_C:  Vps16, C-terminal region;  InterPro: IPR006925 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=24.62  E-value=1.8e+02  Score=20.85  Aligned_cols=51  Identities=14%  Similarity=0.030  Sum_probs=37.2

Q ss_pred             HHHHHHhCCHHHHHHHHHcCCCCCC------CCCCCccHHHHHHhCCCHHHHHHHHh
Q 031662           26 LLAAARYDDIEDVISLASAGVPLDS------KDSQGRTALHMASANGHLGIVEYLIG   76 (155)
Q Consensus        26 l~~A~~~~~~~~v~~ll~~~~~~~~------~~~~~~~~l~~a~~~~~~~~~~~ll~   76 (155)
                      -..|...|..+....|++..+....      .-.....+|.-|+..|+.+++-.++-
T Consensus         7 A~~A~~~GR~~LA~~LL~~Ep~~~~qVplLL~m~e~e~AL~kAi~SgD~DLi~~vLl   63 (319)
T PF04840_consen    7 ARKAYEEGRPKLATKLLELEPRASKQVPLLLKMGEDELALNKAIESGDTDLIYLVLL   63 (319)
T ss_pred             HHHHHHcChHHHHHHHHHcCCChHHHHHHHhcCCchHHHHHHHHHcCCccHHHHHHH
Confidence            4578889999999999998765432      22345678888999999886655553


No 136
>PF04405 ScdA_N:  Domain of Unknown function (DUF542)  ;  InterPro: IPR007500 This is a domain of unknown function found at the N terminus of genes involved in cell wall development and nitrous oxide protection. ScdA is required for normal cell growth and development; mutants have an increased level of peptidoglycan cross-linking and aberrant cellular morphology suggesting a role for ScdA in cell wall metabolism []. NorA1, NorA2, and YtfE are involved in the nitrous oxide response. NorA1 and NorA2, which are similar to YtfE, are co-transcribed with the membrane-bound nitrous oxide (NO) reductases. The genes appear to be involved in NO protection but their function is unknown [, ]. 
Probab=23.52  E-value=1.2e+02  Score=15.39  Aligned_cols=39  Identities=13%  Similarity=0.204  Sum_probs=23.0

Q ss_pred             CcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHH
Q 031662           99 GHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAI  140 (155)
Q Consensus        99 ~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L  140 (155)
                      .++...+.|-++|.|...   .|.-+|..|+.....+.-++|
T Consensus        11 ~~p~~a~vf~~~gIDfCC---gG~~~L~eA~~~~~ld~~~vl   49 (56)
T PF04405_consen   11 EDPRAARVFRKYGIDFCC---GGNRSLEEACEEKGLDPEEVL   49 (56)
T ss_pred             HChHHHHHHHHcCCcccC---CCCchHHHHHHHcCCCHHHHH
Confidence            344556666666666653   455677777766665554444


No 137
>PF12514 DUF3718:  Protein of unknown function (DUF3718);  InterPro: IPR022193 This entry is represented by Bacteriophage Aaphi23, Orf19. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches.  This domain family is found in bacteria and viruses, and is approximately 70 amino acids in length. There is a single completely conserved residue C that may be functionally important. 
Probab=23.32  E-value=1.3e+02  Score=15.92  Aligned_cols=22  Identities=14%  Similarity=0.122  Sum_probs=18.9

Q ss_pred             CCCCCHHHHHHHCCCHHHHHHH
Q 031662          119 SHEQTPIDEALSRGKMDIIDAI  140 (155)
Q Consensus       119 ~~~~t~l~~a~~~~~~~~~~~L  140 (155)
                      -+|.+.+..|..+|-.++.++|
T Consensus        33 CNG~sl~~FA~~~~A~kt~~~l   54 (68)
T PF12514_consen   33 CNGESLLRFAASYGANKTAEFL   54 (68)
T ss_pred             ECCcCHHHHHHHcCHHHHHHHH
Confidence            3688889999999988888888


No 138
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=22.09  E-value=81  Score=21.00  Aligned_cols=47  Identities=21%  Similarity=0.258  Sum_probs=32.9

Q ss_pred             CCCCCCHHHHHHhcCcHHHHH-HHHHcCCC----CcccCCCCCCHHHHHHHC
Q 031662           85 NEEKNTPLHYACLNGHTEVAK-KLVLSGAN----ISVLNSHEQTPIDEALSR  131 (155)
Q Consensus        85 ~~~~~t~l~~a~~~~~~~~~~-~Ll~~~~~----~~~~~~~~~t~l~~a~~~  131 (155)
                      +..-..|||-++.-++.+++- |+++..+.    +|-.|.+|..+|.+|...
T Consensus       219 d~kTe~~LHk~iki~REDVl~LYfie~dakiP~~LNd~D~nG~~ALdiAL~~  270 (280)
T KOG4591|consen  219 DGKTENPLHKAIKIEREDVLFLYFIEMDAKIPGILNDADHNGALALDIALCR  270 (280)
T ss_pred             cCCCcchhHHhhhccccceeeehhhhccccccccccccCCCchHHHHHHHHH
Confidence            334456999999999888764 55565433    456677888888888654


No 139
>KOG3614 consensus Ca2+/Mg2+-permeable cation channels (LTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=21.10  E-value=3.4e+02  Score=23.99  Aligned_cols=94  Identities=16%  Similarity=0.096  Sum_probs=0.0

Q ss_pred             HHHHHHhCCCHHHHHHHHhcCCC-----------------------------CCCCCCCCCCHHHH--HHhcCcHHHHHH
Q 031662           58 ALHMASANGHLGIVEYLIGRGVD-----------------------------INASNEEKNTPLHY--ACLNGHTEVAKK  106 (155)
Q Consensus        58 ~l~~a~~~~~~~~~~~ll~~~~~-----------------------------~~~~~~~~~t~l~~--a~~~~~~~~~~~  106 (155)
                      .+.+|+...+.++++++..+|-+                             -+.-+..+..++-+  -|...+.+.+-.
T Consensus       566 LlIWAvL~~R~~MA~~~W~~gee~~AkALvA~rLykslA~ea~d~~~~s~el~~~s~~f~~lAveLfd~cy~~de~~A~~  645 (1381)
T KOG3614|consen  566 LLIWAVLLNRQGMAKCLWAHGEEAVAKALVASRLYKSLAHEAHDWHEAAKELKTLSDEFEGLAVELFDECYSSDEARALQ  645 (1381)
T ss_pred             HHHHHHHhccHHHHHHHHHhchhHHHHHHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHH


Q ss_pred             HHHcCCCCcccCCCCCCHHHHHHHCCC-----HHHHHHHHHHHhhcccCCCccC
Q 031662          107 LVLSGANISVLNSHEQTPIDEALSRGK-----MDIIDAINTAVAQLELGGFTVS  155 (155)
Q Consensus       107 Ll~~~~~~~~~~~~~~t~l~~a~~~~~-----~~~~~~L~~~g~~~~~~~~~~~  155 (155)
                      |+-+    ..++..+.|+|++|+..+.     -++++.|+..-.--+++.-+-|
T Consensus       646 LLt~----el~~W~~~tCL~LAv~a~~r~FiAH~c~Q~lLt~~W~G~L~~r~~~  695 (1381)
T KOG3614|consen  646 LLTY----ELENWGNSTCLQLAVEANAREFIAHPCCQMLLTDKWYGNLQARNNP  695 (1381)
T ss_pred             HHHh----HHhhcccccHHHHHHhcCCCceeccHhHHHHHHHHHhccccccCCC


No 140
>PF06953 ArsD:  Arsenical resistance operon trans-acting repressor ArsD;  InterPro: IPR010712 This family consists of several bacterial arsenical resistance operon trans-acting repressor ArsD proteins. ArsD is a trans-acting repressor of the arsRDABC operon that confers resistance to arsenicals and antimonials in Escherichia coli. It possesses two-pairs of vicinal cysteine residues, Cys(12)-Cys(13) and Cys(112)-Cys(113), that potentially form separate binding sites for the metalloids that trigger dissociation of ArsD from the operon. However, as a homodimer it has four vicinal cysteine pairs [].; GO: 0003677 DNA binding, 0045892 negative regulation of transcription, DNA-dependent, 0046685 response to arsenic-containing substance; PDB: 3MWH_A 3KGK_A 3KTB_B.
Probab=20.61  E-value=1.2e+02  Score=18.34  Aligned_cols=16  Identities=25%  Similarity=0.530  Sum_probs=7.5

Q ss_pred             HHHHHHhcCCCCCCCC
Q 031662           70 IVEYLIGRGVDINASN   85 (155)
Q Consensus        70 ~~~~ll~~~~~~~~~~   85 (155)
                      .+++|-+.|.++...+
T Consensus        32 ~~~~Lk~~gv~v~RyN   47 (123)
T PF06953_consen   32 DLDWLKEQGVEVERYN   47 (123)
T ss_dssp             HHHHHHHTT-EEEEEE
T ss_pred             HHHHHHhCCceEEEEc
Confidence            3455555555554443


Done!