Query 031662
Match_columns 155
No_of_seqs 153 out of 2164
Neff 11.2
Searched_HMMs 29240
Date Mon Mar 25 05:14:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031662.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031662hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 100.0 8.9E-38 3E-42 196.5 15.5 140 10-149 25-164 (169)
2 1d9s_A Cyclin-dependent kinase 100.0 5.8E-35 2E-39 177.7 13.6 133 13-146 3-136 (136)
3 4gpm_A Engineered protein OR26 100.0 3.2E-34 1.1E-38 180.2 16.8 129 24-152 6-134 (169)
4 2jab_A H10-2-G3; HER2, darpin, 100.0 2.9E-33 1E-37 170.2 15.9 129 16-144 8-136 (136)
5 4b93_B Ankyrin repeat domain-c 100.0 7E-34 2.4E-38 190.8 14.0 144 9-152 73-216 (269)
6 3v30_A DNA-binding protein rfx 100.0 3.8E-33 1.3E-37 175.7 15.9 139 15-153 29-167 (172)
7 1bi7_B P16INK4A, MTS1, multipl 100.0 9E-34 3.1E-38 176.1 10.6 136 16-152 6-142 (156)
8 1ihb_A P18-INK4C(INK6), cyclin 100.0 4.1E-33 1.4E-37 173.9 13.5 135 11-146 27-162 (162)
9 1n0r_A 4ANK, 4 ankyrin repeats 100.0 1E-32 3.5E-37 165.2 14.6 126 21-146 1-126 (126)
10 2y1l_E Darpin-8.4; hydrolase-i 100.0 1.6E-32 5.4E-37 172.6 15.5 135 17-151 9-143 (169)
11 2vge_A RELA-associated inhibit 100.0 6.2E-33 2.1E-37 182.3 14.1 145 2-151 6-153 (229)
12 3v31_A Ankyrin repeat family A 100.0 2.2E-32 7.5E-37 171.5 15.2 137 12-148 26-162 (167)
13 2y1l_E Darpin-8.4; hydrolase-i 100.0 5.2E-32 1.8E-36 170.2 16.9 136 9-144 34-169 (169)
14 2rfm_A Putative ankyrin repeat 100.0 1.1E-32 3.8E-37 176.4 12.9 136 16-151 29-164 (192)
15 3v31_A Ankyrin repeat family A 100.0 2.8E-32 9.6E-37 171.0 14.2 132 21-152 2-133 (167)
16 3f6q_A Integrin-linked protein 100.0 1.5E-32 5.3E-37 174.0 12.6 140 13-152 30-169 (179)
17 2rfm_A Putative ankyrin repeat 100.0 6.2E-32 2.1E-36 172.9 14.7 133 12-144 58-190 (192)
18 3twr_A Tankyrase-2; ankyrin re 100.0 4.2E-32 1.5E-36 169.9 13.1 133 19-151 5-138 (165)
19 3aji_A 26S proteasome non-ATPa 100.0 1.5E-31 5.3E-36 175.4 16.1 140 12-151 63-202 (231)
20 3twr_A Tankyrase-2; ankyrin re 100.0 3.1E-31 1E-35 165.9 15.8 133 12-145 32-164 (165)
21 1awc_B Protein (GA binding pro 100.0 2.9E-31 1E-35 164.2 15.5 127 23-150 3-129 (153)
22 1yyh_A HN1;, notch 1, ankyrin 100.0 1.1E-31 3.7E-36 178.6 14.1 138 14-151 82-220 (253)
23 3f6q_A Integrin-linked protein 100.0 3.7E-31 1.3E-35 167.7 15.3 133 20-152 3-136 (179)
24 1awc_B Protein (GA binding pro 100.0 4.2E-31 1.4E-35 163.5 14.8 123 18-140 30-152 (153)
25 1oy3_D Transcription factor in 100.0 1.9E-31 6.5E-36 179.3 14.0 102 50-151 153-255 (282)
26 2f8y_A Notch homolog 1, transl 100.0 5.4E-31 1.8E-35 171.9 15.2 92 56-147 93-184 (223)
27 3jxi_A Vanilloid receptor-rela 100.0 2.1E-31 7.2E-36 177.6 13.3 136 16-151 87-255 (260)
28 1s70_B 130 kDa myosin-binding 100.0 4E-31 1.4E-35 179.3 14.8 141 11-151 62-262 (299)
29 1ihb_A P18-INK4C(INK6), cyclin 100.0 7.9E-31 2.7E-35 163.5 14.9 130 21-151 4-134 (162)
30 3v30_A DNA-binding protein rfx 100.0 4.8E-31 1.6E-35 166.1 13.8 131 22-152 2-133 (172)
31 3hra_A Ankyrin repeat family p 100.0 1.4E-30 4.8E-35 167.5 16.1 139 14-152 31-176 (201)
32 1ycs_B 53BP2, P53BP2; ankyrin 100.0 2.8E-31 9.7E-36 175.3 13.0 141 9-150 25-168 (239)
33 2dzn_A Probable 26S proteasome 100.0 9.2E-31 3.1E-35 171.3 15.3 135 18-152 68-206 (228)
34 1ikn_D Protein (I-kappa-B-alph 100.0 3.7E-31 1.3E-35 174.2 13.2 138 14-151 37-181 (236)
35 1bd8_A P19INK4D CDK4/6 inhibit 100.0 1E-30 3.5E-35 162.1 14.0 128 14-143 28-155 (156)
36 2etb_A Transient receptor pote 100.0 6E-31 2.1E-35 175.1 13.7 132 18-149 86-249 (256)
37 2f8y_A Notch homolog 1, transl 100.0 2.9E-30 9.8E-35 168.5 16.5 136 14-149 84-219 (223)
38 2rfa_A Transient receptor pote 100.0 1.2E-30 4.2E-35 171.2 14.8 132 16-147 31-184 (232)
39 3b7b_A Euchromatic histone-lys 100.0 2E-30 6.8E-35 170.6 15.7 140 12-151 67-207 (237)
40 3c5r_A BARD-1, BRCA1-associate 100.0 6.4E-32 2.2E-36 164.4 7.8 129 17-145 5-133 (137)
41 1oy3_D Transcription factor in 100.0 7.7E-31 2.6E-35 176.4 13.8 138 15-152 38-223 (282)
42 3aji_A 26S proteasome non-ATPa 100.0 2.3E-30 8E-35 169.7 15.5 138 15-152 33-170 (231)
43 2rfa_A Transient receptor pote 100.0 2.2E-30 7.4E-35 170.1 15.1 132 21-152 2-152 (232)
44 1ikn_D Protein (I-kappa-B-alph 100.0 7.6E-31 2.6E-35 172.7 12.9 140 9-148 65-211 (236)
45 2xai_A ASB-9, ankyrin repeat a 100.0 2.3E-30 7.7E-35 173.0 15.3 136 12-148 26-161 (261)
46 1yyh_A HN1;, notch 1, ankyrin 100.0 1.2E-30 4.2E-35 173.5 13.8 135 18-152 53-188 (253)
47 1k1a_A B-cell lymphoma 3-encod 100.0 2.2E-30 7.5E-35 170.7 14.8 132 19-150 76-212 (241)
48 2pnn_A Transient receptor pote 100.0 1.3E-30 4.5E-35 175.0 13.4 131 18-148 97-261 (273)
49 3hra_A Ankyrin repeat family p 100.0 3.3E-30 1.1E-34 165.8 14.3 135 10-144 60-201 (201)
50 2xai_A ASB-9, ankyrin repeat a 100.0 4.1E-30 1.4E-34 171.7 14.9 141 10-152 57-197 (261)
51 4b93_B Ankyrin repeat domain-c 100.0 1.3E-30 4.4E-35 174.9 12.0 151 2-152 32-183 (269)
52 3b7b_A Euchromatic histone-lys 100.0 7.2E-30 2.5E-34 168.0 15.3 140 12-151 34-174 (237)
53 2etb_A Transient receptor pote 100.0 1.3E-30 4.3E-35 173.6 11.7 136 12-147 29-207 (256)
54 1k1a_A B-cell lymphoma 3-encod 100.0 1.3E-29 4.4E-34 167.0 16.4 142 11-152 35-181 (241)
55 1bd8_A P19INK4D CDK4/6 inhibit 100.0 1.3E-29 4.6E-34 157.1 15.3 129 22-152 2-131 (156)
56 3t8k_A Uncharacterized protein 100.0 1E-30 3.5E-35 166.7 10.4 132 20-151 36-184 (186)
57 3aaa_C Myotrophin, protein V-1 100.0 3E-30 1E-34 154.3 11.5 113 19-131 4-116 (123)
58 1n11_A Ankyrin; clathrin, BAND 100.0 5.1E-30 1.7E-34 182.1 14.7 140 12-151 235-374 (437)
59 3ehr_A Osteoclast-stimulating 100.0 6.1E-31 2.1E-35 171.9 8.8 133 19-151 70-203 (222)
60 3d9h_A CDNA FLJ77766, highly s 100.0 7.6E-30 2.6E-34 172.4 14.3 130 18-148 55-184 (285)
61 4hbd_A KN motif and ankyrin re 100.0 4E-30 1.4E-34 173.2 12.7 137 15-151 104-247 (276)
62 1wdy_A 2-5A-dependent ribonucl 100.0 2.2E-29 7.6E-34 169.2 16.3 134 19-152 145-284 (285)
63 3ljn_A Hypothetical protein; a 100.0 2.3E-30 7.8E-35 180.1 11.7 132 18-149 134-272 (364)
64 3utm_A Tankyrase-1; tankyrase, 100.0 1.9E-29 6.5E-34 174.1 16.1 72 80-151 239-310 (351)
65 1sw6_A Regulatory protein SWI6 100.0 1.7E-30 5.8E-35 178.7 10.1 143 10-152 118-314 (327)
66 3d9h_A CDNA FLJ77766, highly s 100.0 2.1E-29 7.3E-34 170.2 15.1 133 15-148 85-217 (285)
67 3ljn_A Hypothetical protein; a 100.0 6.4E-30 2.2E-34 177.9 12.8 97 54-150 137-240 (364)
68 2dzn_A Probable 26S proteasome 100.0 2.8E-29 9.5E-34 164.2 15.0 136 17-152 31-172 (228)
69 3kea_A K1L; tropism, ANK repea 100.0 5.8E-30 2E-34 173.1 11.9 131 15-147 24-155 (285)
70 1ycs_B 53BP2, P53BP2; ankyrin 100.0 3.2E-30 1.1E-34 170.3 10.3 133 19-152 2-134 (239)
71 1n11_A Ankyrin; clathrin, BAND 100.0 1.6E-29 5.4E-34 179.5 14.2 135 14-148 6-140 (437)
72 1s70_B 130 kDa myosin-binding 100.0 1.3E-28 4.3E-33 167.0 16.2 135 18-152 36-230 (299)
73 4hbd_A KN motif and ankyrin re 100.0 2.1E-29 7.2E-34 169.6 11.8 131 14-144 137-273 (276)
74 1wdy_A 2-5A-dependent ribonucl 100.0 2E-28 6.8E-33 164.5 16.5 131 20-150 3-134 (285)
75 4g8k_A 2-5A-dependent ribonucl 100.0 5.6E-29 1.9E-33 171.5 13.8 150 2-151 146-303 (337)
76 3kea_A K1L; tropism, ANK repea 100.0 3.4E-30 1.2E-34 174.2 7.6 129 22-151 62-191 (285)
77 3deo_A Signal recognition part 100.0 8.4E-30 2.9E-34 162.0 8.9 127 19-146 41-168 (183)
78 3ui2_A Signal recognition part 100.0 4.9E-29 1.7E-33 165.1 12.7 128 19-147 42-186 (244)
79 3jxi_A Vanilloid receptor-rela 100.0 3.4E-29 1.2E-33 166.9 11.7 129 19-147 43-211 (260)
80 1dcq_A PYK2-associated protein 100.0 5.4E-28 1.8E-32 162.9 17.5 130 20-149 128-266 (278)
81 2pnn_A Transient receptor pote 100.0 3.6E-29 1.2E-33 168.0 11.6 131 18-148 50-220 (273)
82 3lvq_E ARF-GAP with SH3 domain 100.0 1.9E-28 6.6E-33 176.7 16.1 129 22-150 132-269 (497)
83 2b0o_E UPLC1; arfgap, structur 100.0 4E-28 1.4E-32 165.1 16.6 128 20-147 149-285 (301)
84 3utm_A Tankyrase-1; tankyrase, 100.0 6.2E-28 2.1E-32 166.5 16.0 134 18-151 20-154 (351)
85 2fo1_E LIN-12 protein; beta-ba 100.0 1.2E-28 4E-33 172.3 12.3 139 12-150 156-342 (373)
86 3eu9_A Huntingtin-interacting 100.0 4.3E-28 1.5E-32 159.4 13.9 127 22-148 76-204 (240)
87 2fo1_E LIN-12 protein; beta-ba 100.0 2.5E-28 8.7E-33 170.5 13.4 114 36-149 147-266 (373)
88 3jue_A Arfgap with coiled-coil 100.0 9E-28 3.1E-32 167.1 15.8 128 19-146 196-326 (368)
89 3eu9_A Huntingtin-interacting 100.0 2E-27 7E-32 156.1 15.9 133 18-150 5-138 (240)
90 1n0q_A 3ANK, 3 ankyrin repeats 100.0 3E-27 1E-31 134.6 11.3 92 55-146 2-93 (93)
91 4g8k_A 2-5A-dependent ribonucl 99.9 3.7E-26 1.3E-30 157.5 16.1 132 20-151 23-155 (337)
92 3t8k_A Uncharacterized protein 99.9 8.1E-28 2.8E-32 153.2 5.1 130 21-152 5-152 (186)
93 1n0q_A 3ANK, 3 ankyrin repeats 99.9 3.4E-26 1.2E-30 130.3 11.3 93 21-113 1-93 (93)
94 3c5r_A BARD-1, BRCA1-associate 99.9 5.6E-26 1.9E-30 138.0 12.2 107 45-152 1-107 (137)
95 2l6b_A NR1C; ankyrin, consensu 99.9 1.2E-26 4.2E-31 136.9 8.3 108 18-125 5-112 (115)
96 1d9s_A Cyclin-dependent kinase 99.9 4.7E-26 1.6E-30 138.2 9.8 107 45-152 2-109 (136)
97 2l6b_A NR1C; ankyrin, consensu 99.9 5.6E-26 1.9E-30 134.1 8.1 104 50-153 4-107 (115)
98 1bi7_B P16INK4A, MTS1, multipl 99.9 3.1E-26 1.1E-30 142.0 6.3 118 10-128 33-151 (156)
99 3aaa_C Myotrophin, protein V-1 99.9 4.4E-25 1.5E-29 131.7 11.0 102 51-152 3-104 (123)
100 2b0o_E UPLC1; arfgap, structur 99.9 2.2E-25 7.6E-30 151.7 8.1 111 18-134 186-299 (301)
101 2aja_A Ankyrin repeat family p 99.9 3.7E-26 1.3E-30 159.4 2.4 126 20-146 90-224 (376)
102 2vge_A RELA-associated inhibit 99.9 5.5E-24 1.9E-28 139.6 12.4 113 38-150 1-116 (229)
103 2jab_A H10-2-G3; HER2, darpin, 99.9 5.4E-24 1.8E-28 129.1 11.2 102 10-111 35-136 (136)
104 1sw6_A Regulatory protein SWI6 99.9 2E-24 6.8E-29 148.5 8.3 122 24-145 99-229 (327)
105 1n0r_A 4ANK, 4 ankyrin repeats 99.9 2.1E-23 7.3E-28 124.4 11.5 103 11-113 24-126 (126)
106 3deo_A Signal recognition part 99.9 1.7E-23 5.8E-28 132.9 10.2 115 12-143 66-181 (183)
107 2zgd_A 3 repeat synthetic anky 99.9 4.2E-23 1.4E-27 120.9 10.0 90 18-107 20-109 (110)
108 2aja_A Ankyrin repeat family p 99.9 7.7E-26 2.6E-30 157.8 -2.2 125 17-149 123-253 (376)
109 3ehr_A Osteoclast-stimulating 99.9 2.5E-23 8.6E-28 135.7 9.6 101 52-152 70-171 (222)
110 3lvq_E ARF-GAP with SH3 domain 99.9 3.8E-23 1.3E-27 149.2 11.3 106 19-124 168-276 (497)
111 2zgd_A 3 repeat synthetic anky 99.9 2.6E-22 8.8E-27 117.5 12.4 92 49-140 18-109 (110)
112 3ui2_A Signal recognition part 99.9 9.7E-23 3.3E-27 134.9 9.7 99 53-152 43-142 (244)
113 3jue_A Arfgap with coiled-coil 99.9 1.2E-22 3.9E-27 141.5 10.4 138 11-148 222-366 (368)
114 1dcq_A PYK2-associated protein 99.9 3.2E-22 1.1E-26 134.7 11.5 99 16-114 163-264 (278)
115 3zrh_A Ubiquitin thioesterase 73.1 20 0.00067 25.6 7.0 49 28-76 28-90 (454)
116 1gp8_A Protein (scaffolding pr 71.5 3.5 0.00012 18.4 2.0 19 25-43 16-34 (40)
117 3qil_A Clathrin heavy chain 1; 38.8 17 0.00059 21.0 1.8 37 78-114 25-61 (125)
118 4g26_A Pentatricopeptide repea 32.3 96 0.0033 22.5 5.2 101 36-142 91-199 (501)
119 3zrh_A Ubiquitin thioesterase 28.9 1.6E+02 0.0056 21.2 6.6 62 63-143 30-91 (454)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=8.9e-38 Score=196.49 Aligned_cols=140 Identities=36% Similarity=0.523 Sum_probs=128.7
Q ss_pred ccCCCccCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCC
Q 031662 10 NRTQTTETSSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKN 89 (155)
Q Consensus 10 ~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~ 89 (155)
+.+.+++..+..|.|||++|+..++.++++++++.|++++.++..|.||||+|+..++.+++++|+++|++++.+|..|+
T Consensus 25 ~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~ 104 (169)
T 4gpm_A 25 ENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGR 104 (169)
T ss_dssp HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred HCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCC
Confidence 44555666788999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhccc
Q 031662 90 TPLHYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLEL 149 (155)
Q Consensus 90 t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~ 149 (155)
||||+|+..|+.+++++|+++|++++.+|..|+|||++|+..|+.+++++|+++|++++-
T Consensus 105 TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie~ 164 (169)
T 4gpm_A 105 TPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLEH 164 (169)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC------
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCC
Confidence 999999999999999999999999999999999999999999999999999999999874
No 2
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=100.00 E-value=5.8e-35 Score=177.71 Aligned_cols=133 Identities=23% Similarity=0.314 Sum_probs=128.0
Q ss_pred CCccCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCC-CCCH
Q 031662 13 QTTETSSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEE-KNTP 91 (155)
Q Consensus 13 ~~~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~-~~t~ 91 (155)
.+.+..+..+.||||.|++.|+.+++++|++.+.+++.++..|.||||+|+. ++.+++++|+++|++++.++.. |.||
T Consensus 3 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~ 81 (136)
T 1d9s_A 3 PGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRP 81 (136)
T ss_dssp CCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCH
T ss_pred CCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCH
Confidence 4556678889999999999999999999999999999999999999999999 9999999999999999999999 9999
Q ss_pred HHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhh
Q 031662 92 LHYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQ 146 (155)
Q Consensus 92 l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~ 146 (155)
||+|+..++.+++++|+++|++++.++..|+|||++|+..++.+++++|+++|+|
T Consensus 82 L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 82 VHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 9999999999999999999999999999999999999999999999999999985
No 3
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=3.2e-34 Score=180.25 Aligned_cols=129 Identities=34% Similarity=0.561 Sum_probs=125.3
Q ss_pred HHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCcHHH
Q 031662 24 DALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACLNGHTEV 103 (155)
Q Consensus 24 ~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 103 (155)
++|+.|++.|++++|++|++.|++++.++..|.||||+|+..++.+++++|++.|++++.+|..|.||||+|+..|+.++
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~ 85 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEV 85 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHH
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccCCC
Q 031662 104 AKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELGGF 152 (155)
Q Consensus 104 ~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~ 152 (155)
+++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+.
T Consensus 86 v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~ 134 (169)
T 4gpm_A 86 VKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDS 134 (169)
T ss_dssp HHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCC
Confidence 9999999999999999999999999999999999999999999987654
No 4
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=100.00 E-value=2.9e-33 Score=170.15 Aligned_cols=129 Identities=33% Similarity=0.485 Sum_probs=121.7
Q ss_pred cCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHH
Q 031662 16 ETSSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYA 95 (155)
Q Consensus 16 ~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a 95 (155)
......+.||||+|++.|+.+++++|++.+.+++..+..|.||||+|+..++.+++++|+++|++++.+|..|.||||+|
T Consensus 8 ~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A 87 (136)
T 2jab_A 8 HHHGSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLA 87 (136)
T ss_dssp ----CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH
T ss_pred CcccccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHH
Confidence 44567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHH
Q 031662 96 CLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAV 144 (155)
Q Consensus 96 ~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g 144 (155)
+..++.+++++|+++|++++.+|..|+|||++|+..|+.+++++|+++|
T Consensus 88 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 88 AFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999999876
No 5
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=7e-34 Score=190.81 Aligned_cols=144 Identities=23% Similarity=0.326 Sum_probs=135.8
Q ss_pred cccCCCccCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCC
Q 031662 9 INRTQTTETSSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEK 88 (155)
Q Consensus 9 ~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~ 88 (155)
+..+.+++..+..|.||||+|+..|+.+++++|++.+++++..+..|.||+++|+..++.+++++|++.|++++.+|..|
T Consensus 73 l~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g 152 (269)
T 4b93_B 73 PASGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSG 152 (269)
T ss_dssp --CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTC
T ss_pred HHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCC
Confidence 34556667778899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccCCC
Q 031662 89 NTPLHYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELGGF 152 (155)
Q Consensus 89 ~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~ 152 (155)
.||||+|+..|+.+++++|+++|++++.++..|+||||+|+..|+.+++++|+++|++++..+.
T Consensus 153 ~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~ 216 (269)
T 4b93_B 153 NTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNK 216 (269)
T ss_dssp CCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCT
T ss_pred CCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCC
Confidence 9999999999999999999999999999999999999999999999999999999999987654
No 6
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=100.00 E-value=3.8e-33 Score=175.74 Aligned_cols=139 Identities=26% Similarity=0.356 Sum_probs=131.5
Q ss_pred ccCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHH
Q 031662 15 TETSSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHY 94 (155)
Q Consensus 15 ~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~ 94 (155)
....+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..++.+++++|+++|++++.++..|.||||+
T Consensus 29 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 108 (172)
T 3v30_A 29 VNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLY 108 (172)
T ss_dssp GGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHH
T ss_pred ccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHH
Confidence 45667889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccCCCc
Q 031662 95 ACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELGGFT 153 (155)
Q Consensus 95 a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~~ 153 (155)
|+..++.+++++|+++|++++.++..|+||+++|+..|+.+++++|+++|+++...++.
T Consensus 109 A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~ 167 (172)
T 3v30_A 109 AVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQSNLV 167 (172)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHSCC---
T ss_pred HHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHhcccCC
Confidence 99999999999999999999999999999999999999999999999999998876653
No 7
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=100.00 E-value=9e-34 Score=176.15 Aligned_cols=136 Identities=24% Similarity=0.317 Sum_probs=121.0
Q ss_pred cCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCC-HHHH
Q 031662 16 ETSSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNT-PLHY 94 (155)
Q Consensus 16 ~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t-~l~~ 94 (155)
...+..+.||||+|++.|+.+++++|++.|.+++..+..|.||||+|+ .++.+++++|+++|++++.++..|.| |||+
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~ 84 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHD 84 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHH
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHH
Confidence 345677889999999999999999999999999999999999999985 89999999999999999999999999 9999
Q ss_pred HHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccCCC
Q 031662 95 ACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELGGF 152 (155)
Q Consensus 95 a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~ 152 (155)
|+..|+.+++++|+++|++++.++..|+|||++|+..|+.+++++|+++|++++..+.
T Consensus 85 A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 142 (156)
T 1bi7_B 85 AAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNH 142 (156)
T ss_dssp HHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC--------
T ss_pred HHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCc
Confidence 9999999999999999999999999999999999999999999999999999987653
No 8
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=100.00 E-value=4.1e-33 Score=173.88 Aligned_cols=135 Identities=25% Similarity=0.280 Sum_probs=114.2
Q ss_pred cCCCccCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCC
Q 031662 11 RTQTTETSSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNT 90 (155)
Q Consensus 11 ~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t 90 (155)
.+.+....+..|.||||+|+. |+.+++++|++.|.+++.++..|.||||+|+..++.+++++|+++|++++.++..|.|
T Consensus 27 ~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t 105 (162)
T 1ihb_A 27 NNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNL 105 (162)
T ss_dssp SCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred CCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCC
Confidence 344455566778888888888 8889999888888888888888888999988888888888888888888888888889
Q ss_pred HHHHHHhcCcHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhh
Q 031662 91 PLHYACLNGHTEVAKKLVLSGAN-ISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQ 146 (155)
Q Consensus 91 ~l~~a~~~~~~~~~~~Ll~~~~~-~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~ 146 (155)
|||+|+..++.+++++|+++|++ ++.++..|+|||++|+..|+.+++++|+++|+|
T Consensus 106 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 106 PLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp HHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred HHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 99998888888899988888887 588888888999999888889999998888875
No 9
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=100.00 E-value=1e-32 Score=165.20 Aligned_cols=126 Identities=37% Similarity=0.579 Sum_probs=122.4
Q ss_pred ccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCc
Q 031662 21 ENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACLNGH 100 (155)
Q Consensus 21 ~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~~~ 100 (155)
+|.||||.|++.|+.+++++|++.+.+++..+..|.||||+|+..++.+++++|++.|++++.++..|.||||+|+..++
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~ 80 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCh
Confidence 36789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhh
Q 031662 101 TEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQ 146 (155)
Q Consensus 101 ~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~ 146 (155)
.+++++|+++|++++.++..|.||+++|+..++.+++++|+++|++
T Consensus 81 ~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 81 LEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 9999999999999999999999999999999999999999999985
No 10
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=100.00 E-value=1.6e-32 Score=172.55 Aligned_cols=135 Identities=32% Similarity=0.482 Sum_probs=113.3
Q ss_pred CCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHH
Q 031662 17 TSSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYAC 96 (155)
Q Consensus 17 ~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~ 96 (155)
.....+.++|+.|++.|+.+++++|++.|.+++..+..|.||||+|+..++.+++++|+++|++++.++..|.||||+|+
T Consensus 9 ~~~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 88 (169)
T 2y1l_E 9 HHGSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAA 88 (169)
T ss_dssp ----CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred cCCCcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHH
Confidence 34566778888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred hcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccCC
Q 031662 97 LNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELGG 151 (155)
Q Consensus 97 ~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~ 151 (155)
..++.+++++|+++|++++.++..|.|||++|+..|+.+++++|+++|++++..+
T Consensus 89 ~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 143 (169)
T 2y1l_E 89 LFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQD 143 (169)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcC
Confidence 8888888888888888888888888888888888888888888888888876654
No 11
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=100.00 E-value=6.2e-33 Score=182.27 Aligned_cols=145 Identities=25% Similarity=0.306 Sum_probs=131.8
Q ss_pred CCCCCcccccCCCccCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCC
Q 031662 2 EQDADPSINRTQTTETSSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDI 81 (155)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~ 81 (155)
++|++|+... ..+..+.|+||.|+..|+.+++++|++.|++++..+..|.||||+|+..++.+++++|++.|+++
T Consensus 6 ~~~~~~~~~~-----~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~ 80 (229)
T 2vge_A 6 RKAGSPRKAR-----RARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANV 80 (229)
T ss_dssp ----CCCCCC-----CTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred ccCCCCcccc-----ccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 4556555543 34568899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcccC-CCCCCHHHHH--HHCCCHHHHHHHHHHHhhcccCC
Q 031662 82 NASNEEKNTPLHYACLNGHTEVAKKLVLSGANISVLN-SHEQTPIDEA--LSRGKMDIIDAINTAVAQLELGG 151 (155)
Q Consensus 82 ~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~-~~~~t~l~~a--~~~~~~~~~~~L~~~g~~~~~~~ 151 (155)
+.+|..|.||||+|+..|+.+++++|++.|++++..+ ..|+|||++| +..|+.+++++|+++|++++..+
T Consensus 81 n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~ 153 (229)
T 2vge_A 81 NSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMN 153 (229)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSG
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCccccc
Confidence 9999999999999999999999999999999999986 6999999999 99999999999999999997764
No 12
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=100.00 E-value=2.2e-32 Score=171.48 Aligned_cols=137 Identities=26% Similarity=0.319 Sum_probs=122.3
Q ss_pred CCCccCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCH
Q 031662 12 TQTTETSSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTP 91 (155)
Q Consensus 12 ~~~~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~ 91 (155)
+......+..|.||||+|+..|+.+++++|++.+.+++..+..|.||||+|+..++.+++++|+++|++++.++..|.||
T Consensus 26 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 105 (167)
T 3v31_A 26 ENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTP 105 (167)
T ss_dssp SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCH
T ss_pred CCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCH
Confidence 44556667788899999999999999999999999998888889999999999999999999999999999999999999
Q ss_pred HHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcc
Q 031662 92 LHYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLE 148 (155)
Q Consensus 92 l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~ 148 (155)
||+|+..++.+++++|+++|++++.++..|.||+++|+..|+.+++++|++++.++.
T Consensus 106 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~ 162 (167)
T 3v31_A 106 LLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKLL 162 (167)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999987764
No 13
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=100.00 E-value=5.2e-32 Score=170.19 Aligned_cols=136 Identities=29% Similarity=0.444 Sum_probs=129.4
Q ss_pred cccCCCccCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCC
Q 031662 9 INRTQTTETSSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEK 88 (155)
Q Consensus 9 ~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~ 88 (155)
++.+.+.+..+..|.||||.|+..|+.+++++|++.|.+++..+..|.||||+|+..++.+++++|+++|++++.++..|
T Consensus 34 l~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g 113 (169)
T 2y1l_E 34 MANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEG 113 (169)
T ss_dssp HHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred HHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC
Confidence 34566777788899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHH
Q 031662 89 NTPLHYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAV 144 (155)
Q Consensus 89 ~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g 144 (155)
.||||+|+..++.+++++|+++|++++.++..|.||+++|+..|+.+++++|+++|
T Consensus 114 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 114 HTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999876
No 14
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=100.00 E-value=1.1e-32 Score=176.42 Aligned_cols=136 Identities=26% Similarity=0.327 Sum_probs=111.2
Q ss_pred cCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHH
Q 031662 16 ETSSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYA 95 (155)
Q Consensus 16 ~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a 95 (155)
+..+..|.||||+|+..|+.+++++|++.+.+++..+..|.||||+|+..++.+++++|++.|++++.++..|.||||+|
T Consensus 29 n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 108 (192)
T 2rfm_A 29 NYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWS 108 (192)
T ss_dssp TCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHH
T ss_pred hCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Confidence 34567778888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred HhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccCC
Q 031662 96 CLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELGG 151 (155)
Q Consensus 96 ~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~ 151 (155)
+..++.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++..+
T Consensus 109 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~ 164 (192)
T 2rfm_A 109 IIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARD 164 (192)
T ss_dssp HHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBC
T ss_pred HHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcC
Confidence 88888888888888888888888888888888888888888888888888776554
No 15
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=100.00 E-value=2.8e-32 Score=170.98 Aligned_cols=132 Identities=20% Similarity=0.291 Sum_probs=126.9
Q ss_pred ccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCc
Q 031662 21 ENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACLNGH 100 (155)
Q Consensus 21 ~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~~~ 100 (155)
.+.||||.|+..|+.+++++|++.+.+++..+..|.||||+|+..++.+++++|+++|++++.++..|.||||+|+..++
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGY 81 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccCCC
Q 031662 101 TEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELGGF 152 (155)
Q Consensus 101 ~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~ 152 (155)
.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 82 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 133 (167)
T 3v31_A 82 TDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETD 133 (167)
T ss_dssp HHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCC
Confidence 9999999999999999999999999999999999999999999999876653
No 16
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=100.00 E-value=1.5e-32 Score=174.03 Aligned_cols=140 Identities=29% Similarity=0.393 Sum_probs=117.6
Q ss_pred CCccCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHH
Q 031662 13 QTTETSSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPL 92 (155)
Q Consensus 13 ~~~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l 92 (155)
......+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..++.+++++|+++|++++.+|..|.|||
T Consensus 30 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L 109 (179)
T 3f6q_A 30 NDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPL 109 (179)
T ss_dssp SCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred ccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHH
Confidence 34556677788888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred HHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccCCC
Q 031662 93 HYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELGGF 152 (155)
Q Consensus 93 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~ 152 (155)
|+|+..++.+++++|+++|++++.++..|.||+++|+..++.+++++|+++|++++...+
T Consensus 110 ~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~~~~~~ 169 (179)
T 3f6q_A 110 HYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNLNRIPY 169 (179)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTCCCSCBCC
T ss_pred HHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHHHHhhcCcccCCc
Confidence 888888888888888888888888888888888888888888888888888888875544
No 17
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=100.00 E-value=6.2e-32 Score=172.95 Aligned_cols=133 Identities=27% Similarity=0.320 Sum_probs=127.5
Q ss_pred CCCccCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCH
Q 031662 12 TQTTETSSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTP 91 (155)
Q Consensus 12 ~~~~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~ 91 (155)
+......+..|.||||+|+..|+.+++++|++.+++++..+..|.||||+|+..++.+++++|+++|++++.++..|.||
T Consensus 58 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 137 (192)
T 2rfm_A 58 FDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETP 137 (192)
T ss_dssp HCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCH
T ss_pred ccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCH
Confidence 44556667789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHH
Q 031662 92 LHYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAV 144 (155)
Q Consensus 92 l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g 144 (155)
||+|+..++.+++++|+++|++++.++..|.||+++|+..|+.+++++|+++|
T Consensus 138 L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 138 LIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999987
No 18
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=100.00 E-value=4.2e-32 Score=169.85 Aligned_cols=133 Identities=33% Similarity=0.474 Sum_probs=94.2
Q ss_pred CcccHHHHHHHHHhCCHHHHHHHHHc-CCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHh
Q 031662 19 SPENIDALLAAARYDDIEDVISLASA-GVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACL 97 (155)
Q Consensus 19 ~~~~~~~l~~A~~~~~~~~v~~ll~~-~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~ 97 (155)
+..+.++|+.|++.|+.+++++|++. +.+++..+..|.||||+|+..++.+++++|+++|++++.++..|.||||+|+.
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 84 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACS 84 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHH
Confidence 45666777777777777777777763 34555566666777777777777777777777777777777777777777777
Q ss_pred cCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccCC
Q 031662 98 NGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELGG 151 (155)
Q Consensus 98 ~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~ 151 (155)
.++.+++++|+++|++++.++..|+||||+|+..|+.+++++|+++|++++..+
T Consensus 85 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~ 138 (165)
T 3twr_A 85 YGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKN 138 (165)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred cCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccC
Confidence 777777777777777777777777777777777777777777777777666544
No 19
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=1.5e-31 Score=175.35 Aligned_cols=140 Identities=19% Similarity=0.251 Sum_probs=119.0
Q ss_pred CCCccCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCH
Q 031662 12 TQTTETSSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTP 91 (155)
Q Consensus 12 ~~~~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~ 91 (155)
+..+...+..|.||||+|+..|+.+++++|++.+.+++.++..|.||||+|+..++.+++++|++.|++++.++..|.||
T Consensus 63 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~ 142 (231)
T 3aji_A 63 GVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATA 142 (231)
T ss_dssp TCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred CCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcH
Confidence 44455566778888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred HHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccCC
Q 031662 92 LHYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELGG 151 (155)
Q Consensus 92 l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~ 151 (155)
||+|+..|+.+++++|+++|++++.++..|+|||++|+..++.+++++|+++|++++..+
T Consensus 143 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~ 202 (231)
T 3aji_A 143 MHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIEN 202 (231)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCC
T ss_pred HHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCC
Confidence 888888888888888888888888888888899999988888899999988888887654
No 20
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.98 E-value=3.1e-31 Score=165.94 Aligned_cols=133 Identities=30% Similarity=0.394 Sum_probs=124.5
Q ss_pred CCCccCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCH
Q 031662 12 TQTTETSSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTP 91 (155)
Q Consensus 12 ~~~~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~ 91 (155)
+......+..+.||||+|+..|+.+++++|++.+.+++.++..|.||||+|+..++.+++++|+++|++++.+|..|.||
T Consensus 32 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 111 (165)
T 3twr_A 32 SVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTP 111 (165)
T ss_dssp TTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCH
T ss_pred CCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCH
Confidence 34455667788899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHh
Q 031662 92 LHYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVA 145 (155)
Q Consensus 92 l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~ 145 (155)
||+|+..++.+++++|+++|++++.++..|+||+++|+. ++.+++++|+++|+
T Consensus 112 L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 112 LHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 999999999999999999999999999999999999877 89999999999886
No 21
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.98 E-value=2.9e-31 Score=164.21 Aligned_cols=127 Identities=27% Similarity=0.414 Sum_probs=73.8
Q ss_pred HHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCcHH
Q 031662 23 IDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACLNGHTE 102 (155)
Q Consensus 23 ~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~~~~~ 102 (155)
.++|+.|++.|+.+++++|++.+.+++ .+..|.||||+|+..++.+++++|++.|++++.++..|.||||+|+..++.+
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 81 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHAN 81 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHH
T ss_pred cHHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHH
Confidence 355555666666666666555555443 3445555666666555555666665555555555555556666665555556
Q ss_pred HHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccC
Q 031662 103 VAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELG 150 (155)
Q Consensus 103 ~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~ 150 (155)
++++|+++|++++.++..|+|||++|+..|+.+++++|+++|++++..
T Consensus 82 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~ 129 (153)
T 1awc_B 82 IVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQ 129 (153)
T ss_dssp HHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc
Confidence 666655555555555555556666666555566666666555555443
No 22
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.98 E-value=1.1e-31 Score=178.60 Aligned_cols=138 Identities=24% Similarity=0.282 Sum_probs=95.8
Q ss_pred CccCCCcccHHHHHHHHHhCCHHHHHHHHHcCC-CCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHH
Q 031662 14 TTETSSPENIDALLAAARYDDIEDVISLASAGV-PLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPL 92 (155)
Q Consensus 14 ~~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l 92 (155)
++...+..|.||||+|+..|+.+++++|++.+. +++..+..|.||||+|+..++.+++++|++.|++++.++..|.|||
T Consensus 82 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L 161 (253)
T 1yyh_A 82 DANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSAL 161 (253)
T ss_dssp CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHH
T ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHH
Confidence 334445556666666666666666666666654 5566666666666666666666667777777777777777777777
Q ss_pred HHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccCC
Q 031662 93 HYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELGG 151 (155)
Q Consensus 93 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~ 151 (155)
|+|+..|+.+++++|+++|++++.++..|.|||++|+..|+.+++++|+++|++++..+
T Consensus 162 ~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d 220 (253)
T 1yyh_A 162 HWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITD 220 (253)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccc
Confidence 77777777777777777777777777777777777777777777777777777776554
No 23
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.98 E-value=3.7e-31 Score=167.67 Aligned_cols=133 Identities=29% Similarity=0.425 Sum_probs=124.1
Q ss_pred cccHHHHHHHHHhCCHHHHHHHHHc-CCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhc
Q 031662 20 PENIDALLAAARYDDIEDVISLASA-GVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACLN 98 (155)
Q Consensus 20 ~~~~~~l~~A~~~~~~~~v~~ll~~-~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~ 98 (155)
..+.++|+.|++.|+.+++++|++. +.+++..+..|.||||+|+..++.+++++|++.|++++.++..|.||||+|+..
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 82 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASH 82 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 4677899999999999999999998 567889999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccCCC
Q 031662 99 GHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELGGF 152 (155)
Q Consensus 99 ~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~ 152 (155)
++.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 83 ~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 136 (179)
T 3f6q_A 83 GHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNK 136 (179)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCT
T ss_pred CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhcc
Confidence 999999999999999999999999999999999999999999999999987654
No 24
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.98 E-value=4.2e-31 Score=163.52 Aligned_cols=123 Identities=33% Similarity=0.475 Sum_probs=119.5
Q ss_pred CCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHh
Q 031662 18 SSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACL 97 (155)
Q Consensus 18 ~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~ 97 (155)
.+..|.||||.|+..|+.+++++|++.+.+++..+..|.||||+|+..++.+++++|+++|++++.++..|.||||+|+.
T Consensus 30 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 109 (153)
T 1awc_B 30 TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATE 109 (153)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence 36678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHH
Q 031662 98 NGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAI 140 (155)
Q Consensus 98 ~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L 140 (155)
.++.+++++|+++|++++.++..|.||+++|+..|+.+++++|
T Consensus 110 ~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 110 HNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred cCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 9999999999999999999999999999999999999999987
No 25
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.98 E-value=1.9e-31 Score=179.34 Aligned_cols=102 Identities=25% Similarity=0.302 Sum_probs=68.2
Q ss_pred CCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCC-CCCCHHHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHH
Q 031662 50 SKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNE-EKNTPLHYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEA 128 (155)
Q Consensus 50 ~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~-~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a 128 (155)
..+..|.||||+|+..++.+++++|+++|++++.++. .|.||||+|+..|+.+++++|+++|++++.++..|+|||++|
T Consensus 153 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A 232 (282)
T 1oy3_D 153 AENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSA 232 (282)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred CcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHH
Confidence 3444555666666666666666666666666666654 366777777777777777777777777777777777777777
Q ss_pred HHCCCHHHHHHHHHHHhhcccCC
Q 031662 129 LSRGKMDIIDAINTAVAQLELGG 151 (155)
Q Consensus 129 ~~~~~~~~~~~L~~~g~~~~~~~ 151 (155)
+..|+.+++++|+++|++++..+
T Consensus 233 ~~~~~~~~v~~Ll~~ga~~~~~~ 255 (282)
T 1oy3_D 233 LLRPNPILARLLRAHGAPEPEDG 255 (282)
T ss_dssp HTSSCHHHHHHHHHTTCCCCCCC
T ss_pred HHcCCcHHHHHHHHcCCCcCcCC
Confidence 77777777777777777666543
No 26
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.97 E-value=5.4e-31 Score=171.94 Aligned_cols=92 Identities=27% Similarity=0.352 Sum_probs=35.3
Q ss_pred ccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHH
Q 031662 56 RTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMD 135 (155)
Q Consensus 56 ~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~ 135 (155)
.||||+|+..++.+++++|+++|++++.++..|.||||+|+..++.+++++|+++|++++.++..|.|||++|+..|+.+
T Consensus 93 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 172 (223)
T 2f8y_A 93 TTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYE 172 (223)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHH
T ss_pred CcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHH
Confidence 33333333333333333333333333333333333333333333333333333333333333333333333333333333
Q ss_pred HHHHHHHHHhhc
Q 031662 136 IIDAINTAVAQL 147 (155)
Q Consensus 136 ~~~~L~~~g~~~ 147 (155)
++++|+++|+++
T Consensus 173 ~v~~Ll~~ga~~ 184 (223)
T 2f8y_A 173 TAKVLLDHFANR 184 (223)
T ss_dssp HHHHHHHTTCCT
T ss_pred HHHHHHHcCCCC
Confidence 333333333333
No 27
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.97 E-value=2.1e-31 Score=177.64 Aligned_cols=136 Identities=21% Similarity=0.224 Sum_probs=125.8
Q ss_pred cCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCC--------------CCCccHHHHHHhCCCHHHHHHHHh---cC
Q 031662 16 ETSSPENIDALLAAARYDDIEDVISLASAGVPLDSKD--------------SQGRTALHMASANGHLGIVEYLIG---RG 78 (155)
Q Consensus 16 ~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~--------------~~~~~~l~~a~~~~~~~~~~~ll~---~~ 78 (155)
...+..|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+..++.+++++|++ .|
T Consensus 87 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~g 166 (260)
T 3jxi_A 87 RDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQ 166 (260)
T ss_dssp CCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCC
T ss_pred cccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccC
Confidence 3445689999999999999999999999999999988 579999999999999999999999 99
Q ss_pred CCCCCCCCCCCCHHHHHHhcCc---------HHHHHHHHHcCCCC-------cccCCCCCCHHHHHHHCCCHHHHHHHHH
Q 031662 79 VDINASNEEKNTPLHYACLNGH---------TEVAKKLVLSGANI-------SVLNSHEQTPIDEALSRGKMDIIDAINT 142 (155)
Q Consensus 79 ~~~~~~~~~~~t~l~~a~~~~~---------~~~~~~Ll~~~~~~-------~~~~~~~~t~l~~a~~~~~~~~~~~L~~ 142 (155)
++++.+|..|.||||+|+..++ .+++++|+++|+++ +.++..|+|||++|+..|+.+++++|++
T Consensus 167 a~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~ 246 (260)
T 3jxi_A 167 ADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIR 246 (260)
T ss_dssp CCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 9999999999999999998887 79999999999988 6799999999999999999999999999
Q ss_pred HHhhcccCC
Q 031662 143 AVAQLELGG 151 (155)
Q Consensus 143 ~g~~~~~~~ 151 (155)
+|.+.....
T Consensus 247 ~g~~~~~~~ 255 (260)
T 3jxi_A 247 REIADAAAH 255 (260)
T ss_dssp HHHHHHC--
T ss_pred hCCCccccc
Confidence 999876554
No 28
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.97 E-value=4e-31 Score=179.31 Aligned_cols=141 Identities=28% Similarity=0.398 Sum_probs=117.5
Q ss_pred cCCCccCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCC----
Q 031662 11 RTQTTETSSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNE---- 86 (155)
Q Consensus 11 ~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~---- 86 (155)
.+.+++..+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..++.+++++|+++|++++..+.
T Consensus 62 ~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t 141 (299)
T 1s70_B 62 RGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDT 141 (299)
T ss_dssp HCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred cCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCC
Confidence 3444555667788888888888888888888888888888888888888888888888888888888887765543
Q ss_pred --------------------------------------------------------CCCCHHHHHHhcCcHHHHHHHHHc
Q 031662 87 --------------------------------------------------------EKNTPLHYACLNGHTEVAKKLVLS 110 (155)
Q Consensus 87 --------------------------------------------------------~~~t~l~~a~~~~~~~~~~~Ll~~ 110 (155)
.|.||||+|+..|+.+++++|+++
T Consensus 142 ~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 221 (299)
T 1s70_B 142 PLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQA 221 (299)
T ss_dssp HHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTT
T ss_pred HHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHc
Confidence 466778888888888899999988
Q ss_pred CCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccCC
Q 031662 111 GANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELGG 151 (155)
Q Consensus 111 ~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~ 151 (155)
|++++.+|..|.||||+|+..|+.+++++|+++|++++..+
T Consensus 222 g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d 262 (299)
T 1s70_B 222 RYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVN 262 (299)
T ss_dssp TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred CCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcC
Confidence 99998888899999999999999999999999998887654
No 29
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.97 E-value=7.9e-31 Score=163.49 Aligned_cols=130 Identities=21% Similarity=0.308 Sum_probs=123.4
Q ss_pred ccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCc
Q 031662 21 ENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACLNGH 100 (155)
Q Consensus 21 ~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~~~ 100 (155)
...+||+.|+..|+.+++++|++.+.+++..+..|.||||+|+. ++.+++++|++.|++++.++..|.||||+|+..++
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 82 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGF 82 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC
Confidence 45789999999999999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhh-cccCC
Q 031662 101 TEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQ-LELGG 151 (155)
Q Consensus 101 ~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~-~~~~~ 151 (155)
.+++++|+++|++++.++..|+||||+|+..|+.+++++|+++|++ ++..+
T Consensus 83 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 134 (162)
T 1ihb_A 83 LDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRN 134 (162)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCC
T ss_pred HHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcC
Confidence 9999999999999999999999999999999999999999999987 35443
No 30
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.97 E-value=4.8e-31 Score=166.09 Aligned_cols=131 Identities=21% Similarity=0.277 Sum_probs=123.8
Q ss_pred cHHHHHHHHHhCCHHHHHHHHHcCCC-CCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCc
Q 031662 22 NIDALLAAARYDDIEDVISLASAGVP-LDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACLNGH 100 (155)
Q Consensus 22 ~~~~l~~A~~~~~~~~v~~ll~~~~~-~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~~~ 100 (155)
+.+|||.|+..|+.++++++++.+.. ++..+..|.||||+|+..++.+++++|+++|++++.++..|.||||+|+..++
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGY 81 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCC
Confidence 35789999999999999999999877 78889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccCCC
Q 031662 101 TEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELGGF 152 (155)
Q Consensus 101 ~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~ 152 (155)
.+++++|+++|++++.++..|+||||+|+..|+.+++++|+++|++++..+.
T Consensus 82 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 133 (172)
T 3v30_A 82 TDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEAD 133 (172)
T ss_dssp HHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCC
Confidence 9999999999999999999999999999999999999999999999887653
No 31
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.97 E-value=1.4e-30 Score=167.49 Aligned_cols=139 Identities=23% Similarity=0.277 Sum_probs=129.5
Q ss_pred CccCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHH-hcCCCCCCCCCCCCCHH
Q 031662 14 TTETSSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLI-GRGVDINASNEEKNTPL 92 (155)
Q Consensus 14 ~~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll-~~~~~~~~~~~~~~t~l 92 (155)
.....+..|.||||+|++.|+.+++++|++.|++++..+..|.||||+|+..++.+++++|+ ..+.+++.++..|.|||
T Consensus 31 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L 110 (201)
T 3hra_A 31 QVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNAL 110 (201)
T ss_dssp CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSH
T ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHH
Confidence 55667788999999999999999999999999999999999999999999999999999999 55779999999999999
Q ss_pred HHHHhcCcHHHHHHHHHcC-CCCcccCCCCCCHHHHHHHCCC-----HHHHHHHHHHHhhcccCCC
Q 031662 93 HYACLNGHTEVAKKLVLSG-ANISVLNSHEQTPIDEALSRGK-----MDIIDAINTAVAQLELGGF 152 (155)
Q Consensus 93 ~~a~~~~~~~~~~~Ll~~~-~~~~~~~~~~~t~l~~a~~~~~-----~~~~~~L~~~g~~~~~~~~ 152 (155)
|+|+..++.+++++|+++| ++++.++..|+||||+|+..++ .+++++|+++|++++..+.
T Consensus 111 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~ 176 (201)
T 3hra_A 111 IPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDN 176 (201)
T ss_dssp HHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCT
T ss_pred HHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCC
Confidence 9999999999999999999 8999999999999999999988 9999999999999987654
No 32
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.97 E-value=2.8e-31 Score=175.33 Aligned_cols=141 Identities=25% Similarity=0.323 Sum_probs=124.5
Q ss_pred cccCCCccCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCC
Q 031662 9 INRTQTTETSSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEK 88 (155)
Q Consensus 9 ~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~ 88 (155)
++.+..+.. +..+.||||.|+..|+.+++++|++.+.+++.++..|.||||+|+..++.+++++|+++|++++.+|..|
T Consensus 25 l~~g~~~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g 103 (239)
T 1ycs_B 25 IAHGMRVKF-NPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDG 103 (239)
T ss_dssp -------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTC
T ss_pred hccCCCccc-CchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCC
Confidence 344444433 3678999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHhcCcHHHHHHHHHcCCCCcccCCCCC-CHHHHH--HHCCCHHHHHHHHHHHhhcccC
Q 031662 89 NTPLHYACLNGHTEVAKKLVLSGANISVLNSHEQ-TPIDEA--LSRGKMDIIDAINTAVAQLELG 150 (155)
Q Consensus 89 ~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~-t~l~~a--~~~~~~~~~~~L~~~g~~~~~~ 150 (155)
.||||+|+..|+.+++++|+++|++++.++..+. ||+++| +..|+.+++++|+++|++++..
T Consensus 104 ~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~ 168 (239)
T 1ycs_B 104 WTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIM 168 (239)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTTT
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhccccc
Confidence 9999999999999999999999999999998887 999999 7889999999999999998764
No 33
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.97 E-value=9.2e-31 Score=171.28 Aligned_cols=135 Identities=22% Similarity=0.270 Sum_probs=123.7
Q ss_pred CCcccHHHHHHHHHhCCHHHHHHHHHcC--CCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHH
Q 031662 18 SSPENIDALLAAARYDDIEDVISLASAG--VPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYA 95 (155)
Q Consensus 18 ~~~~~~~~l~~A~~~~~~~~v~~ll~~~--~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a 95 (155)
.+..|.||||.|+..|+.+++++|++.+ .+++..+..|.||||+|+..++.+++++|+++|++++.++..|.||||+|
T Consensus 68 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A 147 (228)
T 2dzn_A 68 PDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRA 147 (228)
T ss_dssp CCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHH
Confidence 5678889999999999999999999998 88888888999999999999999999999999999999999999999999
Q ss_pred HhcCcHHHHHHHHHcC-CCCcccCCCCCCHHHHHHHCCCHHHHHHHH-HHHhhcccCCC
Q 031662 96 CLNGHTEVAKKLVLSG-ANISVLNSHEQTPIDEALSRGKMDIIDAIN-TAVAQLELGGF 152 (155)
Q Consensus 96 ~~~~~~~~~~~Ll~~~-~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~-~~g~~~~~~~~ 152 (155)
+..|+.+++++|++.| ++++.++..|+|||++|+..|+.+++++|+ ++|++++..+.
T Consensus 148 ~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~ 206 (228)
T 2dzn_A 148 ASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDN 206 (228)
T ss_dssp HHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCT
T ss_pred HHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCC
Confidence 9999999999999999 899999999999999999999999999999 88999886653
No 34
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.97 E-value=3.7e-31 Score=174.22 Aligned_cols=138 Identities=22% Similarity=0.245 Sum_probs=101.6
Q ss_pred CccCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCC------CCCCCCC
Q 031662 14 TTETSSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVD------INASNEE 87 (155)
Q Consensus 14 ~~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~------~~~~~~~ 87 (155)
..+..+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.+++++|++.+.+ ++..+..
T Consensus 37 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 116 (236)
T 1ikn_D 37 FLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYN 116 (236)
T ss_dssp CCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTT
T ss_pred HhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCC
Confidence 3455566677777777777777777777777777777777777777777777777777777777654 3556667
Q ss_pred CCCHHHHHHhcCcHHHHHHHHHcCCCCcccCC-CCCCHHHHHHHCCCHHHHHHHHHHHhhcccCC
Q 031662 88 KNTPLHYACLNGHTEVAKKLVLSGANISVLNS-HEQTPIDEALSRGKMDIIDAINTAVAQLELGG 151 (155)
Q Consensus 88 ~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~-~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~ 151 (155)
|.||||+|+..|+.+++++|+++|++++.++. .|.||||+|+..|+.+++++|+++|++++..+
T Consensus 117 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~ 181 (236)
T 1ikn_D 117 GHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVT 181 (236)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccc
Confidence 77777777777777777777777777777776 77777777777777777777777777776554
No 35
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.97 E-value=1e-30 Score=162.13 Aligned_cols=128 Identities=23% Similarity=0.409 Sum_probs=95.0
Q ss_pred CccCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHH
Q 031662 14 TTETSSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLH 93 (155)
Q Consensus 14 ~~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~ 93 (155)
.....+..|.||||+ +..|+.+++++|++.|.+++.++..|.||||+|+..++.+++++|+++|++++.+|..|.||||
T Consensus 28 ~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 106 (156)
T 1bd8_A 28 HPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIH 106 (156)
T ss_dssp CTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHH
T ss_pred CccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHH
Confidence 344555667777777 7777777777777777777777777777777777777777777777777777777777777777
Q ss_pred HHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHH
Q 031662 94 YACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTA 143 (155)
Q Consensus 94 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~ 143 (155)
+|+..|+.+++++|++. ++++.++..|.||+++|+..|+.+++++|+++
T Consensus 107 ~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 107 LAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp HHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred HHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 77777777777777777 77777777777777777777777777777653
No 36
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=6e-31 Score=175.12 Aligned_cols=132 Identities=22% Similarity=0.288 Sum_probs=124.8
Q ss_pred CCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCC-------------CccHHHHHHhCCCHHHHHHHHh---cCCCC
Q 031662 18 SSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQ-------------GRTALHMASANGHLGIVEYLIG---RGVDI 81 (155)
Q Consensus 18 ~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~-------------~~~~l~~a~~~~~~~~~~~ll~---~~~~~ 81 (155)
.+..|.||||+|+..|+.+++++|++.|++++..+.. |.||||+|+..++.+++++|++ .|+++
T Consensus 86 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~ 165 (256)
T 2etb_A 86 EFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASL 165 (256)
T ss_dssp TTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCT
T ss_pred ccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCc
Confidence 3467999999999999999999999999999988876 9999999999999999999999 99999
Q ss_pred CCCCCCCCCHHHHHHh--cCcHH-------HHHHHHHcCCCC-------cccCCCCCCHHHHHHHCCCHHHHHHHHHHHh
Q 031662 82 NASNEEKNTPLHYACL--NGHTE-------VAKKLVLSGANI-------SVLNSHEQTPIDEALSRGKMDIIDAINTAVA 145 (155)
Q Consensus 82 ~~~~~~~~t~l~~a~~--~~~~~-------~~~~Ll~~~~~~-------~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~ 145 (155)
+.+|..|.||||+|+. .++.+ ++++|+++|+++ +.+|..|+|||++|+..|+.+++++|+++|.
T Consensus 166 n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~ 245 (256)
T 2etb_A 166 EATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREF 245 (256)
T ss_dssp TCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHHhCCC
Confidence 9999999999999999 78888 999999999999 8999999999999999999999999999998
Q ss_pred hccc
Q 031662 146 QLEL 149 (155)
Q Consensus 146 ~~~~ 149 (155)
+...
T Consensus 246 ~~~~ 249 (256)
T 2etb_A 246 SGAA 249 (256)
T ss_dssp HHHH
T ss_pred CCCC
Confidence 8653
No 37
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.97 E-value=2.9e-30 Score=168.49 Aligned_cols=136 Identities=24% Similarity=0.273 Sum_probs=129.3
Q ss_pred CccCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHH
Q 031662 14 TTETSSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLH 93 (155)
Q Consensus 14 ~~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~ 93 (155)
.....+..+.||||+|+..++.+++++|++.+.+++..+..|.||||+|+..++.+++++|+++|++++.++..|.||||
T Consensus 84 ~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 163 (223)
T 2f8y_A 84 DLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLF 163 (223)
T ss_dssp CTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHH
T ss_pred CcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHH
Confidence 45566778899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhccc
Q 031662 94 YACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLEL 149 (155)
Q Consensus 94 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~ 149 (155)
+|+..++.+++++|+++|++++.++..|.||+++|+..++.+++++|+++|+....
T Consensus 164 ~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~~~~ 219 (223)
T 2f8y_A 164 LAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVRSP 219 (223)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCSSCC
T ss_pred HHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchHHHHHHHHcCCCccc
Confidence 99999999999999999999999999999999999999999999999999987643
No 38
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.97 E-value=1.2e-30 Score=171.21 Aligned_cols=132 Identities=26% Similarity=0.338 Sum_probs=62.8
Q ss_pred cCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCC-----CCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCC----
Q 031662 16 ETSSPENIDALLAAARYDDIEDVISLASAGVPL-----DSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNE---- 86 (155)
Q Consensus 16 ~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~-----~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~---- 86 (155)
...+..|.||||+|+..|+.+++++|++.++++ +..+..|.||||+|+..++.+++++|+++|++++.++.
T Consensus 31 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~ 110 (232)
T 2rfa_A 31 HQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVF 110 (232)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGG
T ss_pred ccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcce
Confidence 333444445555555555555555555544433 33334444555555544444555555444444444332
Q ss_pred ---------CCCCHHHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHH----HHHHHHHhhc
Q 031662 87 ---------EKNTPLHYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDII----DAINTAVAQL 147 (155)
Q Consensus 87 ---------~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~----~~L~~~g~~~ 147 (155)
.|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++.+++ ++|+++|++.
T Consensus 111 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~ 184 (232)
T 2rfa_A 111 HYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGD 184 (232)
T ss_dssp SCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSC
T ss_pred eecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCch
Confidence 344455555444444555544444444444444444454444444444444 4444444433
No 39
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.97 E-value=2e-30 Score=170.65 Aligned_cols=140 Identities=24% Similarity=0.390 Sum_probs=104.8
Q ss_pred CCCccCCCcccHHHHHHHHHhCCHHHHHHHHHcC-CCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCC
Q 031662 12 TQTTETSSPENIDALLAAARYDDIEDVISLASAG-VPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNT 90 (155)
Q Consensus 12 ~~~~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~-~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t 90 (155)
+......+..+.||||.|+..|+.+++++|++.+ .+++..+..|.||||+|+..++.+++++|++.|++++.++..|.|
T Consensus 67 g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t 146 (237)
T 3b7b_A 67 GALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENI 146 (237)
T ss_dssp TCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCC
Confidence 3334445566667777777777777777777776 666667777777777777777777777777777777777777777
Q ss_pred HHHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccCC
Q 031662 91 PLHYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELGG 151 (155)
Q Consensus 91 ~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~ 151 (155)
|||+|+..|+.+++++|++.|++++.++..|.|||++|+..++.+++++|+++|++++..+
T Consensus 147 ~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d 207 (237)
T 3b7b_A 147 CLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKN 207 (237)
T ss_dssp HHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCC
T ss_pred HHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccC
Confidence 8888777777788888887777777777777888888888888888888888877776554
No 40
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.97 E-value=6.4e-32 Score=164.37 Aligned_cols=129 Identities=27% Similarity=0.346 Sum_probs=119.6
Q ss_pred CCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHH
Q 031662 17 TSSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYAC 96 (155)
Q Consensus 17 ~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~ 96 (155)
..+..|.||||.|+..|+.+++++|++.+.+++.++..|.||||+|+..++.+++++|+++|++++.++..|.||||+|+
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~ 84 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAA 84 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHH
Confidence 44678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHh
Q 031662 97 LNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVA 145 (155)
Q Consensus 97 ~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~ 145 (155)
..++.+++++|+++|++++.+|..|.||+++|+..+..+++++|.+.+.
T Consensus 85 ~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~ 133 (137)
T 3c5r_A 85 KNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNES 133 (137)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC-----
T ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhcccccc
Confidence 9999999999999999999999999999999999999999988877654
No 41
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.97 E-value=7.7e-31 Score=176.37 Aligned_cols=138 Identities=22% Similarity=0.251 Sum_probs=125.7
Q ss_pred ccCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCC--------------
Q 031662 15 TETSSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVD-------------- 80 (155)
Q Consensus 15 ~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~-------------- 80 (155)
....+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..++.+++++|++++++
T Consensus 38 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~ 117 (282)
T 1oy3_D 38 LDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQ 117 (282)
T ss_dssp GGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC---------
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhccc
Confidence 456678899999999999999999999999999999999999999999999999999999987654
Q ss_pred ---------------------------------CCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcccCCC-CCCHHH
Q 031662 81 ---------------------------------INASNEEKNTPLHYACLNGHTEVAKKLVLSGANISVLNSH-EQTPID 126 (155)
Q Consensus 81 ---------------------------------~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~-~~t~l~ 126 (155)
++.++..|.||||+|+..|+.+++++|+++|++++.++.. |+||||
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~ 197 (282)
T 1oy3_D 118 DCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLH 197 (282)
T ss_dssp --------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHH
T ss_pred ccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHH
Confidence 6677889999999999999999999999999999998854 999999
Q ss_pred HHHHCCCHHHHHHHHHHHhhcccCCC
Q 031662 127 EALSRGKMDIIDAINTAVAQLELGGF 152 (155)
Q Consensus 127 ~a~~~~~~~~~~~L~~~g~~~~~~~~ 152 (155)
+|+..|+.+++++|+++|++++..+.
T Consensus 198 ~A~~~~~~~~v~~Ll~~gad~~~~d~ 223 (282)
T 1oy3_D 198 LAVEAQAASVLELLLKAGADPTARMY 223 (282)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHHcCCHHHHHHHHHcCCCCccccc
Confidence 99999999999999999999987654
No 42
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.97 E-value=2.3e-30 Score=169.72 Aligned_cols=138 Identities=28% Similarity=0.397 Sum_probs=131.6
Q ss_pred ccCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHH
Q 031662 15 TETSSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHY 94 (155)
Q Consensus 15 ~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~ 94 (155)
....+..|.||||+|+..|+.+++++|++.+.+++..+..|.||||+|+..++.+++++|+++|++++.++..|.||||+
T Consensus 33 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 112 (231)
T 3aji_A 33 ATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHY 112 (231)
T ss_dssp GGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred hhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHH
Confidence 44567889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccCCC
Q 031662 95 ACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELGGF 152 (155)
Q Consensus 95 a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~ 152 (155)
|+..++.+++++|+++|++++.++..|.|||++|+..|+.+++++|+++|++++..+.
T Consensus 113 A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 170 (231)
T 3aji_A 113 AASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDT 170 (231)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCT
T ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCC
Confidence 9999999999999999999999999999999999999999999999999999887653
No 43
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.97 E-value=2.2e-30 Score=170.06 Aligned_cols=132 Identities=23% Similarity=0.309 Sum_probs=123.6
Q ss_pred ccHHHHHHHHHhCCHHHHHHHHHc-CCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCC-----CCCCCCCCCHHHH
Q 031662 21 ENIDALLAAARYDDIEDVISLASA-GVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDI-----NASNEEKNTPLHY 94 (155)
Q Consensus 21 ~~~~~l~~A~~~~~~~~v~~ll~~-~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~-----~~~~~~~~t~l~~ 94 (155)
.|.||||.|++.|+.+++++|++. +.+++.++..|.||||+|+..++.+++++|++.++++ +.++..|.||||+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~ 81 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHI 81 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHH
Confidence 467899999999999999999998 9999999999999999999999999999999999876 6678899999999
Q ss_pred HHhcCcHHHHHHHHHcCCCCcccCC-------------CCCCHHHHHHHCCCHHHHHHHHHHHhhcccCCC
Q 031662 95 ACLNGHTEVAKKLVLSGANISVLNS-------------HEQTPIDEALSRGKMDIIDAINTAVAQLELGGF 152 (155)
Q Consensus 95 a~~~~~~~~~~~Ll~~~~~~~~~~~-------------~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~ 152 (155)
|+..|+.+++++|+++|++++.++. .|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 82 A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~ 152 (232)
T 2rfa_A 82 AVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDS 152 (232)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCC
Confidence 9999999999999999999988765 799999999999999999999999999887653
No 44
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.97 E-value=7.6e-31 Score=172.75 Aligned_cols=140 Identities=24% Similarity=0.297 Sum_probs=129.7
Q ss_pred cccCCCccCCCcccHHHHHHHHHhCCHHHHHHHHHcCCC------CCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCC
Q 031662 9 INRTQTTETSSPENIDALLAAARYDDIEDVISLASAGVP------LDSKDSQGRTALHMASANGHLGIVEYLIGRGVDIN 82 (155)
Q Consensus 9 ~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~------~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~ 82 (155)
++.+.++...+..|.||||+|+..|+.+++++|++.+.+ ++..+..|.||||+|+..++.+++++|+++|++++
T Consensus 65 l~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 144 (236)
T 1ikn_D 65 LGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVN 144 (236)
T ss_dssp CSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTT
T ss_pred HHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 344555666778899999999999999999999999865 45677889999999999999999999999999999
Q ss_pred CCCC-CCCCHHHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcc
Q 031662 83 ASNE-EKNTPLHYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLE 148 (155)
Q Consensus 83 ~~~~-~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~ 148 (155)
.++. .|.||||+|+..|+.+++++|+++|++++.++..|+||+++|+..|+.+++++|+++|++..
T Consensus 145 ~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~ 211 (236)
T 1ikn_D 145 AQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENL 211 (236)
T ss_dssp CCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGG
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhhh
Confidence 9997 99999999999999999999999999999999999999999999999999999999999765
No 45
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.97 E-value=2.3e-30 Score=172.97 Aligned_cols=136 Identities=21% Similarity=0.276 Sum_probs=93.1
Q ss_pred CCCccCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCH
Q 031662 12 TQTTETSSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTP 91 (155)
Q Consensus 12 ~~~~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~ 91 (155)
+.+++..+..|.||||+|+..|+.+++++|++.|.+++..+..|.||||+|+..++.+++++|+++|++++.. ..|.||
T Consensus 26 g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~ 104 (261)
T 2xai_A 26 GWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPE-SDLASP 104 (261)
T ss_dssp TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCS-CTTCCH
T ss_pred CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC-CCCCCH
Confidence 3444555666777777777777777777777777777777777777777777777777777777776666543 346666
Q ss_pred HHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcc
Q 031662 92 LHYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLE 148 (155)
Q Consensus 92 l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~ 148 (155)
||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++
T Consensus 105 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 161 (261)
T 2xai_A 105 IHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVN 161 (261)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTT
T ss_pred HHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 666666666666666666666666666666666666666666666666666666654
No 46
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.97 E-value=1.2e-30 Score=173.52 Aligned_cols=135 Identities=22% Similarity=0.275 Sum_probs=129.5
Q ss_pred CCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCC-CCCCCCCCCCCHHHHHH
Q 031662 18 SSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGV-DINASNEEKNTPLHYAC 96 (155)
Q Consensus 18 ~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~-~~~~~~~~~~t~l~~a~ 96 (155)
.+..|.||||+|+..|+.+++++|++.|.+++..+..|.||||+|+..++.+++++|++.+. +++.++..|.||||+|+
T Consensus 53 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~ 132 (253)
T 1yyh_A 53 TDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAA 132 (253)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHH
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHH
Confidence 46889999999999999999999999999999999999999999999999999999999987 89999999999999999
Q ss_pred hcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccCCC
Q 031662 97 LNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELGGF 152 (155)
Q Consensus 97 ~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~ 152 (155)
..++.+++++|++.|++++.++..|+||||+|+..|+.+++++|+++|++++..+.
T Consensus 133 ~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 188 (253)
T 1yyh_A 133 RLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNN 188 (253)
T ss_dssp HHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred HcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCC
Confidence 99999999999999999999999999999999999999999999999999987653
No 47
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.97 E-value=2.2e-30 Score=170.68 Aligned_cols=132 Identities=23% Similarity=0.295 Sum_probs=74.2
Q ss_pred CcccHHHHHHHHHhCCHHHHHHHHHcCC----CCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCC-CCCCCHHH
Q 031662 19 SPENIDALLAAARYDDIEDVISLASAGV----PLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASN-EEKNTPLH 93 (155)
Q Consensus 19 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~----~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~-~~~~t~l~ 93 (155)
+..|.||||+|+..++.+++++|++.+. +++..+..|.||||+|+..++.+++++|++.|++++..+ ..|.||||
T Consensus 76 ~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~ 155 (241)
T 1k1a_A 76 DRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLI 155 (241)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHH
Confidence 3444455555555555555555555443 444444455555555555555555555555555555555 45556666
Q ss_pred HHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccC
Q 031662 94 YACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELG 150 (155)
Q Consensus 94 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~ 150 (155)
+|+..++.+++++|+++|++++.++..|+||||+|+..|+.+++++|+++|++++..
T Consensus 156 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~ 212 (241)
T 1k1a_A 156 HAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLK 212 (241)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCC
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCc
Confidence 666666666666666666666666666666666666666666666666666655543
No 48
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.97 E-value=1.3e-30 Score=175.00 Aligned_cols=131 Identities=25% Similarity=0.330 Sum_probs=122.0
Q ss_pred CCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCC--------------CCccHHHHHHhCCCHHHHHHHHh---cCCC
Q 031662 18 SSPENIDALLAAARYDDIEDVISLASAGVPLDSKDS--------------QGRTALHMASANGHLGIVEYLIG---RGVD 80 (155)
Q Consensus 18 ~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~--------------~~~~~l~~a~~~~~~~~~~~ll~---~~~~ 80 (155)
.+..|.||||+|+..|+.+++++|++.|++++..+. .|.||||+|+..++.+++++|++ .|++
T Consensus 97 ~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad 176 (273)
T 2pnn_A 97 SYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPAD 176 (273)
T ss_dssp TTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCC
T ss_pred ccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCC
Confidence 456899999999999999999999999999998886 79999999999999999999999 9999
Q ss_pred CCCCCCCCCCHHHHHHhcCc---------HHHHHHHHHcCCCCc-------ccCCCCCCHHHHHHHCCCHHHHHHHHHHH
Q 031662 81 INASNEEKNTPLHYACLNGH---------TEVAKKLVLSGANIS-------VLNSHEQTPIDEALSRGKMDIIDAINTAV 144 (155)
Q Consensus 81 ~~~~~~~~~t~l~~a~~~~~---------~~~~~~Ll~~~~~~~-------~~~~~~~t~l~~a~~~~~~~~~~~L~~~g 144 (155)
++.+|..|.||||+|+..++ .+++++|+++|++++ .+|..|+|||++|+..|+.+++++|+++|
T Consensus 177 ~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~g 256 (273)
T 2pnn_A 177 ISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQRE 256 (273)
T ss_dssp TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred ceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCC
Confidence 99999999999999999988 799999999999886 58999999999999999999999999999
Q ss_pred h-hcc
Q 031662 145 A-QLE 148 (155)
Q Consensus 145 ~-~~~ 148 (155)
+ |..
T Consensus 257 a~dp~ 261 (273)
T 2pnn_A 257 IHEPE 261 (273)
T ss_dssp TC---
T ss_pred CCCch
Confidence 9 443
No 49
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.97 E-value=3.3e-30 Score=165.75 Aligned_cols=135 Identities=23% Similarity=0.242 Sum_probs=125.8
Q ss_pred ccCCCccCCCcccHHHHHHHHHhCCHHHHHHHH-HcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcC-CCCCCCCCC
Q 031662 10 NRTQTTETSSPENIDALLAAARYDDIEDVISLA-SAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRG-VDINASNEE 87 (155)
Q Consensus 10 ~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~ll-~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~ 87 (155)
+.+.++...+..+.||||+|+..|+.+++++|+ ..+.+++..+..|.||||+|+..++.+++++|++.| ++++.++..
T Consensus 60 ~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~ 139 (201)
T 3hra_A 60 DRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDF 139 (201)
T ss_dssp HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTT
T ss_pred HcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCC
Confidence 345555667788999999999999999999999 566799999999999999999999999999999998 999999999
Q ss_pred CCCHHHHHHhcCc-----HHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHH
Q 031662 88 KNTPLHYACLNGH-----TEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAV 144 (155)
Q Consensus 88 ~~t~l~~a~~~~~-----~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g 144 (155)
|.||||+|+..++ .+++++|+++|++++.++..|+|||++|+..|+.+++++|+++|
T Consensus 140 g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 140 GYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp SCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred CCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 9999999999998 99999999999999999999999999999999999999999876
No 50
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.97 E-value=4.1e-30 Score=171.69 Aligned_cols=141 Identities=21% Similarity=0.265 Sum_probs=130.0
Q ss_pred ccCCCccCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCC
Q 031662 10 NRTQTTETSSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKN 89 (155)
Q Consensus 10 ~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~ 89 (155)
+.+.++...+..|.||||+|+..|+.+++++|++.|++++. +..|.||||+|+..++.+++++|+++|++++.++..|.
T Consensus 57 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 135 (261)
T 2xai_A 57 KHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQP-ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLG 135 (261)
T ss_dssp HTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSC-SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTB
T ss_pred HCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCC
Confidence 34555667778899999999999999999999999999875 44589999999999999999999999999999999999
Q ss_pred CHHHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccCCC
Q 031662 90 TPLHYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELGGF 152 (155)
Q Consensus 90 t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~ 152 (155)
||||+|+..++.+++++|+++|++++. +..|.||||+|+..++.+++++|+++|++++..+.
T Consensus 136 t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~ 197 (261)
T 2xai_A 136 TPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVARTASEELACLLMDFGADTQAKNA 197 (261)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHTCCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred CHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCC
Confidence 999999999999999999999999995 88999999999999999999999999999987654
No 51
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.97 E-value=1.3e-30 Score=174.92 Aligned_cols=151 Identities=22% Similarity=0.360 Sum_probs=107.4
Q ss_pred CCCCCcccccCCCccCCCcccHHHHHHHHHhCCH-HHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCC
Q 031662 2 EQDADPSINRTQTTETSSPENIDALLAAARYDDI-EDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVD 80 (155)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~-~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~ 80 (155)
+.|+++...........+..+.+||+.|+..+.. .++++|++.|+++|..+..|.||||+|+..++.+++++|++.+++
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~ 111 (269)
T 4b93_B 32 EWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGAN 111 (269)
T ss_dssp TCC----------------------------------------CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCC
T ss_pred HCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCC
Confidence 4455555444555667778899999999987765 588999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccCCC
Q 031662 81 INASNEEKNTPLHYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELGGF 152 (155)
Q Consensus 81 ~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~ 152 (155)
++.++..|.||+++|+..++.+++++|++.|++++.+|..|+|||++|+..|+.+++++|+++|++++..+.
T Consensus 112 ~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~ 183 (269)
T 4b93_B 112 AGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNN 183 (269)
T ss_dssp TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCT
T ss_pred cCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCcccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999987654
No 52
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.97 E-value=7.2e-30 Score=167.98 Aligned_cols=140 Identities=29% Similarity=0.469 Sum_probs=98.2
Q ss_pred CCCccCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcC-CCCCCCCCCCCC
Q 031662 12 TQTTETSSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRG-VDINASNEEKNT 90 (155)
Q Consensus 12 ~~~~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~t 90 (155)
+.+....+..|.||||.|+..|+.+++++|++.|.+++..+..|.||||+|+..++.+++++|++.+ .+++.++..|.|
T Consensus 34 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t 113 (237)
T 3b7b_A 34 GANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWT 113 (237)
T ss_dssp TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCC
T ss_pred CCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCC
Confidence 3344445556667777777777777777777777777666667777777777777777777777766 666666777777
Q ss_pred HHHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccCC
Q 031662 91 PLHYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELGG 151 (155)
Q Consensus 91 ~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~ 151 (155)
|||+|+..++.+++++|+++|++++.++..|.|||++|+..|+.+++++|+++|++++..+
T Consensus 114 ~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~ 174 (237)
T 3b7b_A 114 PMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVN 174 (237)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCC
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcC
Confidence 7777777777777777777777777777777777777777777777777777777665543
No 53
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=1.3e-30 Score=173.57 Aligned_cols=136 Identities=18% Similarity=0.201 Sum_probs=124.7
Q ss_pred CCCccC----CCcccHHHHHHHHHh---CCHHHHHHHHHcCCCCCC-----------CCCCCccHHHHHHhCCCHHHHHH
Q 031662 12 TQTTET----SSPENIDALLAAARY---DDIEDVISLASAGVPLDS-----------KDSQGRTALHMASANGHLGIVEY 73 (155)
Q Consensus 12 ~~~~~~----~~~~~~~~l~~A~~~---~~~~~v~~ll~~~~~~~~-----------~~~~~~~~l~~a~~~~~~~~~~~ 73 (155)
+.++.. .+..|.||||+|+.. |+.+++++|++.|.+++. .+..|.||||+|+..++.+++++
T Consensus 29 g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~ 108 (256)
T 2etb_A 29 SKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKL 108 (256)
T ss_dssp TCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHH
T ss_pred CCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHH
Confidence 444444 678999999999999 999999999999876653 33679999999999999999999
Q ss_pred HHhcCCCCCCCCCC-------------CCCHHHHHHhcCcHHHHHHHHH---cCCCCcccCCCCCCHHHHHHH--CCCHH
Q 031662 74 LIGRGVDINASNEE-------------KNTPLHYACLNGHTEVAKKLVL---SGANISVLNSHEQTPIDEALS--RGKMD 135 (155)
Q Consensus 74 ll~~~~~~~~~~~~-------------~~t~l~~a~~~~~~~~~~~Ll~---~~~~~~~~~~~~~t~l~~a~~--~~~~~ 135 (155)
|+++|++++.++.. |.||||+|+..|+.+++++|++ .|++++.+|..|+||||+|+. .++.+
T Consensus 109 Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~ 188 (256)
T 2etb_A 109 LVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPE 188 (256)
T ss_dssp HHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHH
T ss_pred HHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCch
Confidence 99999999999876 9999999999999999999999 999999999999999999999 88888
Q ss_pred -------HHHHHHHHHhhc
Q 031662 136 -------IIDAINTAVAQL 147 (155)
Q Consensus 136 -------~~~~L~~~g~~~ 147 (155)
++++|+++|+++
T Consensus 189 ~~~~~~~iv~~Ll~~ga~~ 207 (256)
T 2etb_A 189 NSALVIHMYDGLLQMGARL 207 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHcCCCc
Confidence 999999999999
No 54
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.97 E-value=1.3e-29 Score=167.02 Aligned_cols=142 Identities=20% Similarity=0.219 Sum_probs=129.0
Q ss_pred cCCCccCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCC----CCCCCCC
Q 031662 11 RTQTTETSSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGV----DINASNE 86 (155)
Q Consensus 11 ~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~----~~~~~~~ 86 (155)
.+...+..+..|.||||+|+..|+.+++++|++.|.+++..+..|.||||+|+..++.+++++|++.+. +++..+.
T Consensus 35 ~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~ 114 (241)
T 1k1a_A 35 GGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNY 114 (241)
T ss_dssp TTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCT
T ss_pred cCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCc
Confidence 455666677889999999999999999999999999999999999999999999999999999999887 7888899
Q ss_pred CCCCHHHHHHhcCcHHHHHHHHHcCCCCcccC-CCCCCHHHHHHHCCCHHHHHHHHHHHhhcccCCC
Q 031662 87 EKNTPLHYACLNGHTEVAKKLVLSGANISVLN-SHEQTPIDEALSRGKMDIIDAINTAVAQLELGGF 152 (155)
Q Consensus 87 ~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~-~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~ 152 (155)
.|.||||+|+..++.+++++|++.|++++..+ ..|.|||++|+..|+.+++++|+++|++++..+.
T Consensus 115 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 181 (241)
T 1k1a_A 115 DGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMY 181 (241)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCC
Confidence 99999999999999999999999999999888 7899999999999999999999999999876653
No 55
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.97 E-value=1.3e-29 Score=157.06 Aligned_cols=129 Identities=26% Similarity=0.333 Sum_probs=121.9
Q ss_pred cHHHHHHHHHhCCHHHHHHHHHc-CCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCc
Q 031662 22 NIDALLAAARYDDIEDVISLASA-GVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACLNGH 100 (155)
Q Consensus 22 ~~~~l~~A~~~~~~~~v~~ll~~-~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~~~ 100 (155)
+.++|+.|++.|+.+++++|++. +.+++..+..|.||||+ +..++.+++++|++.|++++.++..|.||||+|+..|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 80 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGF 80 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCc
Confidence 57899999999999999999998 34888899999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccCCC
Q 031662 101 TEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELGGF 152 (155)
Q Consensus 101 ~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~ 152 (155)
.+++++|+++|++++.++..|+||||+|+..|+.+++++|+++ ++++..+.
T Consensus 81 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~ 131 (156)
T 1bd8_A 81 LDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDA 131 (156)
T ss_dssp HHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCT
T ss_pred HHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCC
Confidence 9999999999999999999999999999999999999999999 88776543
No 56
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.97 E-value=1e-30 Score=166.68 Aligned_cols=132 Identities=14% Similarity=0.132 Sum_probs=122.0
Q ss_pred cccHHHHHHHHHhCCH----HHHHHHHHcCCCCCCCCCCCccHHHHHHhCCC------HHHHHHHHhcCCCCCCCCCCCC
Q 031662 20 PENIDALLAAARYDDI----EDVISLASAGVPLDSKDSQGRTALHMASANGH------LGIVEYLIGRGVDINASNEEKN 89 (155)
Q Consensus 20 ~~~~~~l~~A~~~~~~----~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~------~~~~~~ll~~~~~~~~~~~~~~ 89 (155)
..|.||||+|+..++. +++++|+++|++++.++..|+||||+|+..++ .+++++|+++|++++.+|..|.
T Consensus 36 ~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ 115 (186)
T 3t8k_A 36 VLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYK 115 (186)
T ss_dssp HHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGT
T ss_pred cCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcC
Confidence 5689999999999975 58999999999999999999999999999886 5789999999999999999999
Q ss_pred -CHHHHHHhcC-----cHHHHHHHHH-cCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccCC
Q 031662 90 -TPLHYACLNG-----HTEVAKKLVL-SGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELGG 151 (155)
Q Consensus 90 -t~l~~a~~~~-----~~~~~~~Ll~-~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~ 151 (155)
||||+|+..+ +.+++++|++ +|++++.+|..|+|||++|++.++.+++++|.++..+.++++
T Consensus 116 ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~~~~~~~ 184 (186)
T 3t8k_A 116 IVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYIKKYNLKE 184 (186)
T ss_dssp BCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHHHHHHTCCC
T ss_pred chHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHHHHHHhccc
Confidence 9999999844 4679999999 999999999999999999999999999999999988877765
No 57
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.97 E-value=3e-30 Score=154.28 Aligned_cols=113 Identities=27% Similarity=0.417 Sum_probs=106.6
Q ss_pred CcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhc
Q 031662 19 SPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACLN 98 (155)
Q Consensus 19 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~ 98 (155)
...+.+|||.|+..|+.+++++|++.+.+++..+..|.||||+|+..++.+++++|++.|++++.+|..|.||||+|+..
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~ 83 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYE 83 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHC
Q 031662 99 GHTEVAKKLVLSGANISVLNSHEQTPIDEALSR 131 (155)
Q Consensus 99 ~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~ 131 (155)
++.+++++|+++|++++.++..|+||+++|...
T Consensus 84 ~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~ 116 (123)
T 3aaa_C 84 GHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQ 116 (123)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCH
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCH
Confidence 999999999999999999999999999999443
No 58
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.97 E-value=5.1e-30 Score=182.09 Aligned_cols=140 Identities=24% Similarity=0.317 Sum_probs=120.3
Q ss_pred CCCccCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCH
Q 031662 12 TQTTETSSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTP 91 (155)
Q Consensus 12 ~~~~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~ 91 (155)
+......+..|.||||.|+..|+.+++++|++.+.+++..+..|.||||+|+..++.+++++|+++|++++.++..|.||
T Consensus 235 g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~ 314 (437)
T 1n11_A 235 GGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTP 314 (437)
T ss_dssp TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCH
T ss_pred CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCH
Confidence 33445566678888888888888888888888888888888888888888888888888888888888888888889999
Q ss_pred HHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccCC
Q 031662 92 LHYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELGG 151 (155)
Q Consensus 92 l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~ 151 (155)
||+|+..|+.+++++|+++|++++.++..|+||||+|+..|+.+++++|+++|++++..+
T Consensus 315 L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~ 374 (437)
T 1n11_A 315 LHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVS 374 (437)
T ss_dssp HHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCC
T ss_pred HHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCC
Confidence 999999999999999999999999888889999999999999999999999998887654
No 59
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.97 E-value=6.1e-31 Score=171.86 Aligned_cols=133 Identities=23% Similarity=0.290 Sum_probs=116.4
Q ss_pred CcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhc-CCCCCCCCCCCCCHHHHHHh
Q 031662 19 SPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGR-GVDINASNEEKNTPLHYACL 97 (155)
Q Consensus 19 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~t~l~~a~~ 97 (155)
+..+.||||+|+..|+.+++++|++.+.+++.++..|.||||+|+..++.+++++|++. |++++.+|..|.||||+|+.
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~ 149 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAW 149 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHH
T ss_pred ccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHH
Confidence 34667999999999999999999999999999999999999999999999999999998 99999999999999999999
Q ss_pred cCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccCC
Q 031662 98 NGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELGG 151 (155)
Q Consensus 98 ~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~ 151 (155)
.|+.+++++|+++|++++.++..|+|||++|+..++.++++.|+..|+...+.+
T Consensus 150 ~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~ 203 (222)
T 3ehr_A 150 KGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSN 203 (222)
T ss_dssp HTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC-------------
T ss_pred cCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccc
Confidence 999999999999999999999999999999999999999999999999887654
No 60
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.97 E-value=7.6e-30 Score=172.44 Aligned_cols=130 Identities=23% Similarity=0.374 Sum_probs=68.6
Q ss_pred CCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHh
Q 031662 18 SSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACL 97 (155)
Q Consensus 18 ~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~ 97 (155)
.+..|.||||+|+..|+.+++++|++.|.+++.++..|.||||+|+..++.+++++|+++|++++.++..|.||||+|+.
T Consensus 55 ~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~ 134 (285)
T 3d9h_A 55 DAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACV 134 (285)
T ss_dssp SSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHH
T ss_pred CCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Confidence 44555555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred cCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcc
Q 031662 98 NGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLE 148 (155)
Q Consensus 98 ~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~ 148 (155)
.|+.+++++|+++|++++..+ .|.|||++|+..|+.+++++|+++|++++
T Consensus 135 ~~~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~ 184 (285)
T 3d9h_A 135 SGSWDCVNLLLQHGASVQPES-DLASPIHEAARRGHVECVNSLIAYGGNID 184 (285)
T ss_dssp HTCHHHHHHHHHTTCCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred cCHHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 555555555555544444322 24444444444444444444444444443
No 61
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.97 E-value=4e-30 Score=173.15 Aligned_cols=137 Identities=18% Similarity=0.252 Sum_probs=102.1
Q ss_pred ccCCCcccHHHHHHHHHhCCHHHHHHHHHcCC-CCCCCCCCCccHHHHHH-----hCCCHHHHHHHHhcCCCCCCCCCCC
Q 031662 15 TETSSPENIDALLAAARYDDIEDVISLASAGV-PLDSKDSQGRTALHMAS-----ANGHLGIVEYLIGRGVDINASNEEK 88 (155)
Q Consensus 15 ~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~-~~~~~~~~~~~~l~~a~-----~~~~~~~~~~ll~~~~~~~~~~~~~ 88 (155)
.+..+..|.||||+|+..|+.+++++|++.|. +++..+..|.||||+|+ ..++.+++++|++.|...+..+..|
T Consensus 104 ~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g 183 (276)
T 4hbd_A 104 VNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAG 183 (276)
T ss_dssp HTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTC
T ss_pred CcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCC
Confidence 45667889999999999999999999999997 88877777777777776 3455666777777776666666667
Q ss_pred CCHHHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHH-HHhhcccCC
Q 031662 89 NTPLHYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINT-AVAQLELGG 151 (155)
Q Consensus 89 ~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~-~g~~~~~~~ 151 (155)
.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++ .|++++..+
T Consensus 184 ~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d 247 (276)
T 4hbd_A 184 QTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTD 247 (276)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCC
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcC
Confidence 777777777777777777777777777777777777777777777777777776 666666544
No 62
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.97 E-value=2.2e-29 Score=169.17 Aligned_cols=134 Identities=24% Similarity=0.288 Sum_probs=128.8
Q ss_pred CcccHHHHHHHHHhCCHHHHHHHHHc-CCCCCCCCCCCccHHHHHHhCCC----HHHHHHHHhcCCCCCCCCCCCCCHHH
Q 031662 19 SPENIDALLAAARYDDIEDVISLASA-GVPLDSKDSQGRTALHMASANGH----LGIVEYLIGRGVDINASNEEKNTPLH 93 (155)
Q Consensus 19 ~~~~~~~l~~A~~~~~~~~v~~ll~~-~~~~~~~~~~~~~~l~~a~~~~~----~~~~~~ll~~~~~~~~~~~~~~t~l~ 93 (155)
+..+.+|||.|+..|+.+++++|++. +.+++..+..|.||||+|+..++ .+++++|+++|++++.++..|.||||
T Consensus 145 ~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~ 224 (285)
T 1wdy_A 145 RKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLI 224 (285)
T ss_dssp TCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHH
T ss_pred ccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHH
Confidence 56788999999999999999999998 99999999999999999999999 89999999999999999999999999
Q ss_pred HHHhcCcHHHHHHHHH-cCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccCCC
Q 031662 94 YACLNGHTEVAKKLVL-SGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELGGF 152 (155)
Q Consensus 94 ~a~~~~~~~~~~~Ll~-~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~ 152 (155)
+|+..++.+++++|++ .|++++.++..|+|||++|+..|+.+++++|+++|++++.++.
T Consensus 225 ~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~~~d~ 284 (285)
T 1wdy_A 225 LAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDL 284 (285)
T ss_dssp HHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSSC
T ss_pred HHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccc
Confidence 9999999999999999 8999999999999999999999999999999999999998764
No 63
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.97 E-value=2.3e-30 Score=180.13 Aligned_cols=132 Identities=16% Similarity=0.201 Sum_probs=127.0
Q ss_pred CCcccHHHHHHHHHhC--CHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCC-----CCCCCCCCCC
Q 031662 18 SSPENIDALLAAARYD--DIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVD-----INASNEEKNT 90 (155)
Q Consensus 18 ~~~~~~~~l~~A~~~~--~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~-----~~~~~~~~~t 90 (155)
.+..|.||||+|+..| +.+++++|++.|++++..+..|.||||+|+..++.+++++|+++|++ ++.++..|.|
T Consensus 134 ~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t 213 (364)
T 3ljn_A 134 KHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNS 213 (364)
T ss_dssp EEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCC
T ss_pred CCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCc
Confidence 5668899999999999 99999999999999999999999999999999999999999999988 9999999999
Q ss_pred HHHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhccc
Q 031662 91 PLHYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLEL 149 (155)
Q Consensus 91 ~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~ 149 (155)
|||+|+..|+.+++++|+++|++++.+|..|+|||++|+..|+.+++++|+++|+++..
T Consensus 214 ~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~ 272 (364)
T 3ljn_A 214 HLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLI 272 (364)
T ss_dssp TTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCchhh
Confidence 99999999999999999999999999999999999999999999999999999988643
No 64
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.97 E-value=1.9e-29 Score=174.06 Aligned_cols=72 Identities=25% Similarity=0.331 Sum_probs=45.7
Q ss_pred CCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccCC
Q 031662 80 DINASNEEKNTPLHYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELGG 151 (155)
Q Consensus 80 ~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~ 151 (155)
+++.++..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+
T Consensus 239 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~ 310 (351)
T 3utm_A 239 NVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIIS 310 (351)
T ss_dssp CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC
T ss_pred CcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcC
Confidence 334445556666666666666666666666666666666666666666666666666666666666665544
No 65
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.97 E-value=1.7e-30 Score=178.71 Aligned_cols=143 Identities=19% Similarity=0.116 Sum_probs=128.6
Q ss_pred ccCCCccC-CCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCC---HHHHHHHHhcC-CCCCCC
Q 031662 10 NRTQTTET-SSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGH---LGIVEYLIGRG-VDINAS 84 (155)
Q Consensus 10 ~~~~~~~~-~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~---~~~~~~ll~~~-~~~~~~ 84 (155)
..+.+++. .+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..++ .++++.|++.+ .+++.+
T Consensus 118 ~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~ 197 (327)
T 1sw6_A 118 NTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILE 197 (327)
T ss_dssp TSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEE
T ss_pred hcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCC
Confidence 34455666 68899999999999999999999999999999999999999999999998 67778888775 679999
Q ss_pred CCCCCCHHHHHHh----cCcHHHHHHHHHcCC---------------------------------------------CCc
Q 031662 85 NEEKNTPLHYACL----NGHTEVAKKLVLSGA---------------------------------------------NIS 115 (155)
Q Consensus 85 ~~~~~t~l~~a~~----~~~~~~~~~Ll~~~~---------------------------------------------~~~ 115 (155)
+..|.||||+|+. .|+.+++++|++.+. +++
T Consensus 198 d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n 277 (327)
T 1sw6_A 198 DSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLN 277 (327)
T ss_dssp CTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTT
T ss_pred CCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCC
Confidence 9999999999999 899999999987742 578
Q ss_pred ccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccCCC
Q 031662 116 VLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELGGF 152 (155)
Q Consensus 116 ~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~ 152 (155)
.+|..|+||||+|+..|+.+++++|+++|++++..+.
T Consensus 278 ~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~ 314 (327)
T 1sw6_A 278 AQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANK 314 (327)
T ss_dssp CCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCT
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCC
Confidence 8899999999999999999999999999999987654
No 66
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.97 E-value=2.1e-29 Score=170.24 Aligned_cols=133 Identities=21% Similarity=0.292 Sum_probs=73.8
Q ss_pred ccCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHH
Q 031662 15 TETSSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHY 94 (155)
Q Consensus 15 ~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~ 94 (155)
+...+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..++.+++++|++.|++++..+ .|.||||+
T Consensus 85 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~g~t~L~~ 163 (285)
T 3d9h_A 85 VNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPES-DLASPIHE 163 (285)
T ss_dssp SCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSC-TTSCHHHH
T ss_pred CCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCC-CCCCHHHH
Confidence 33444555666666666666666666666666666555556666666665555555555555555554322 25555555
Q ss_pred HHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcc
Q 031662 95 ACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLE 148 (155)
Q Consensus 95 a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~ 148 (155)
|+..|+.+++++|+++|++++.++..|+|||++|+..|+.+++++|+++|++++
T Consensus 164 A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 217 (285)
T 3d9h_A 164 AARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVN 217 (285)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred HHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCC
Confidence 555555555555555555555555555555555555555555555555555443
No 67
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.97 E-value=6.4e-30 Score=177.87 Aligned_cols=97 Identities=19% Similarity=0.214 Sum_probs=53.7
Q ss_pred CCccHHHHHHhCC--CHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCC-----CcccCCCCCCHHH
Q 031662 54 QGRTALHMASANG--HLGIVEYLIGRGVDINASNEEKNTPLHYACLNGHTEVAKKLVLSGAN-----ISVLNSHEQTPID 126 (155)
Q Consensus 54 ~~~~~l~~a~~~~--~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~-----~~~~~~~~~t~l~ 126 (155)
.|.||||+|+..+ +.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++ ++..+..|+||||
T Consensus 137 ~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~ 216 (364)
T 3ljn_A 137 KGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLH 216 (364)
T ss_dssp SCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTH
T ss_pred CCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHH
Confidence 4455555555555 55555555555555555555555555555555555555555555555 5555555555555
Q ss_pred HHHHCCCHHHHHHHHHHHhhcccC
Q 031662 127 EALSRGKMDIIDAINTAVAQLELG 150 (155)
Q Consensus 127 ~a~~~~~~~~~~~L~~~g~~~~~~ 150 (155)
+|+..|+.+++++|+++|++++..
T Consensus 217 ~A~~~g~~~~v~~Ll~~gad~~~~ 240 (364)
T 3ljn_A 217 WAILINWEDVAMRFVEMGIDVNME 240 (364)
T ss_dssp HHHTTTCHHHHHHHHTTTCCTTCC
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCC
Confidence 555555555555555555555443
No 68
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.97 E-value=2.8e-29 Score=164.24 Aligned_cols=136 Identities=25% Similarity=0.303 Sum_probs=126.5
Q ss_pred CCCcccHHHHHHHHHhCCHHHHHHHHHcC--CCCCC-CCCCCccHHHHHHhCCCHHHHHHHHhcC--CCCCCCCCCCCCH
Q 031662 17 TSSPENIDALLAAARYDDIEDVISLASAG--VPLDS-KDSQGRTALHMASANGHLGIVEYLIGRG--VDINASNEEKNTP 91 (155)
Q Consensus 17 ~~~~~~~~~l~~A~~~~~~~~v~~ll~~~--~~~~~-~~~~~~~~l~~a~~~~~~~~~~~ll~~~--~~~~~~~~~~~t~ 91 (155)
..+..|.||||+|+..|+.+++++|++.+ .+++. .+..|.||||+|+..++.+++++|+++| .+++.++..|.||
T Consensus 31 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~ 110 (228)
T 2dzn_A 31 QKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTC 110 (228)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCH
T ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCH
Confidence 36788999999999999999999999999 55555 7788999999999999999999999998 8899999999999
Q ss_pred HHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHH-hhcccCCC
Q 031662 92 LHYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAV-AQLELGGF 152 (155)
Q Consensus 92 l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g-~~~~~~~~ 152 (155)
||+|+..++.+++++|+++|++++.++..|+||||+|+..|+.+++++|+++| ++++..+.
T Consensus 111 L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~ 172 (228)
T 2dzn_A 111 LHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDK 172 (228)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCT
T ss_pred HHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCC
Confidence 99999999999999999999999999999999999999999999999999999 88876543
No 69
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.97 E-value=5.8e-30 Score=173.05 Aligned_cols=131 Identities=20% Similarity=0.203 Sum_probs=103.0
Q ss_pred ccCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHH
Q 031662 15 TETSSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHY 94 (155)
Q Consensus 15 ~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~ 94 (155)
+...+..|.||||+|+..|+.+++++|++.|++++..+ |.||||+|+..++.+++++|+++|++++.++..|.||||+
T Consensus 24 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~--g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~ 101 (285)
T 3kea_A 24 TFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYY 101 (285)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCCT--TCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred CCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCC--CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHH
Confidence 45666778888888888888888888888887777663 6788888888888888888888888888888888888888
Q ss_pred HHhcCcHHHHHHHHHcCCCCcccCCCC-CCHHHHHHHCCCHHHHHHHHHHHhhc
Q 031662 95 ACLNGHTEVAKKLVLSGANISVLNSHE-QTPIDEALSRGKMDIIDAINTAVAQL 147 (155)
Q Consensus 95 a~~~~~~~~~~~Ll~~~~~~~~~~~~~-~t~l~~a~~~~~~~~~~~L~~~g~~~ 147 (155)
|+..|+.+++++|+++|++++.++..| .|||++|+..|+.+++++|+++|++.
T Consensus 102 A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~ 155 (285)
T 3kea_A 102 AVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST 155 (285)
T ss_dssp HHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTT
T ss_pred HHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCcc
Confidence 888888888888888888888777777 57777777777777777777766554
No 70
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.97 E-value=3.2e-30 Score=170.31 Aligned_cols=133 Identities=23% Similarity=0.197 Sum_probs=95.0
Q ss_pred CcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhc
Q 031662 19 SPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACLN 98 (155)
Q Consensus 19 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~ 98 (155)
...|.|||+.|++.++.+.++.++++|.+++.. ..+.|+||+|+..++.+++++|++.|++++.+|..|.||||+|+..
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~ 80 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAHGMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCA 80 (239)
T ss_dssp ------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHH
T ss_pred CccccccCchhhhhhhHHHHHHHhccCCCcccC-chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 356899999999999999999999999998754 6789999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccCCC
Q 031662 99 GHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELGGF 152 (155)
Q Consensus 99 ~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~ 152 (155)
|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+.
T Consensus 81 g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 134 (239)
T 1ycs_B 81 GHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTY 134 (239)
T ss_dssp TCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCS
T ss_pred CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecC
Confidence 999999999999999999999999999999999999999999999999987654
No 71
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.97 E-value=1.6e-29 Score=179.55 Aligned_cols=135 Identities=25% Similarity=0.363 Sum_probs=92.2
Q ss_pred CccCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHH
Q 031662 14 TTETSSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLH 93 (155)
Q Consensus 14 ~~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~ 93 (155)
++...+..|.||||+|+..|+++++++|+++|.+++..+..+.||||+|+..|+.+++++|+++|++++.++..|.||||
T Consensus 6 ~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 85 (437)
T 1n11_A 6 SGGGGGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLH 85 (437)
T ss_dssp ---------CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHH
T ss_pred CccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHH
Confidence 34445566777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred HHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcc
Q 031662 94 YACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLE 148 (155)
Q Consensus 94 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~ 148 (155)
+|+..|+.+++++|+++|++++..+..|.|||++|+..|+.+++++|++++++..
T Consensus 86 ~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~ 140 (437)
T 1n11_A 86 CAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQA 140 (437)
T ss_dssp HHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSC
T ss_pred HHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCc
Confidence 7777777777777777777777777777777777777777777777776666554
No 72
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.96 E-value=1.3e-28 Score=167.05 Aligned_cols=135 Identities=26% Similarity=0.436 Sum_probs=124.6
Q ss_pred CCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHh
Q 031662 18 SSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACL 97 (155)
Q Consensus 18 ~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~ 97 (155)
.+..+.++|+.|+..|+++++++|++.|.+++..+..|.||||+|+..++.+++++|+++|++++.++..|.||||+|+.
T Consensus 36 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~ 115 (299)
T 1s70_B 36 VKFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAAS 115 (299)
T ss_dssp CEECHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred cccCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcHHHHHHHHHcCCCCcccCC----------------------------------------------------------
Q 031662 98 NGHTEVAKKLVLSGANISVLNS---------------------------------------------------------- 119 (155)
Q Consensus 98 ~~~~~~~~~Ll~~~~~~~~~~~---------------------------------------------------------- 119 (155)
.|+.+++++|+++|++++..+.
T Consensus 116 ~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 195 (299)
T 1s70_B 116 CGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRH 195 (299)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCC
T ss_pred cCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhh
Confidence 9999999999999998876553
Q ss_pred --CCCCHHHHHHHCCCHHHHHHHHHHHhhcccCCC
Q 031662 120 --HEQTPIDEALSRGKMDIIDAINTAVAQLELGGF 152 (155)
Q Consensus 120 --~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~~ 152 (155)
.|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 196 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~ 230 (299)
T 1s70_B 196 AKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDY 230 (299)
T ss_dssp TTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCT
T ss_pred cCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCC
Confidence 467888899999999999999999999887654
No 73
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.96 E-value=2.1e-29 Score=169.61 Aligned_cols=131 Identities=26% Similarity=0.428 Sum_probs=125.4
Q ss_pred CccCCCcccHHHHHHHH-----HhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCC
Q 031662 14 TTETSSPENIDALLAAA-----RYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEK 88 (155)
Q Consensus 14 ~~~~~~~~~~~~l~~A~-----~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~ 88 (155)
.....+..|.|||++|+ ..++.+++++|++.|...+..+..|.||||+|+..++.+++++|++.|++++.+|..|
T Consensus 137 ~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G 216 (276)
T 4hbd_A 137 KVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDG 216 (276)
T ss_dssp CTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred cCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCC
Confidence 66677889999999999 7799999999999999988889999999999999999999999999999999999999
Q ss_pred CCHHHHHHhcCcHHHHHHHHH-cCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHH
Q 031662 89 NTPLHYACLNGHTEVAKKLVL-SGANISVLNSHEQTPIDEALSRGKMDIIDAINTAV 144 (155)
Q Consensus 89 ~t~l~~a~~~~~~~~~~~Ll~-~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g 144 (155)
.||||+|+..|+.+++++|++ .|++++.+|..|+|||++|+..|+.+++++|++++
T Consensus 217 ~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 217 STALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp CCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred CCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 999999999999999999999 89999999999999999999999999999999875
No 74
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.96 E-value=2e-28 Score=164.53 Aligned_cols=131 Identities=24% Similarity=0.319 Sum_probs=125.7
Q ss_pred cccHHHHHHHHHhCCHHHHHHHHHcCCCCCCC-CCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhc
Q 031662 20 PENIDALLAAARYDDIEDVISLASAGVPLDSK-DSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACLN 98 (155)
Q Consensus 20 ~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~-~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~ 98 (155)
..|.++|+.|++.|+++++++|++.+.+++.. +..|.||||+|+..++.+++++|+++|++++.++..|.||||+|+..
T Consensus 3 ~~g~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 82 (285)
T 1wdy_A 3 VEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIA 82 (285)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred cccchHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHc
Confidence 36889999999999999999999999999887 77799999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccC
Q 031662 99 GHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELG 150 (155)
Q Consensus 99 ~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~ 150 (155)
|+.+++++|+++|++++.++..|.|||++|+..|+.+++++|+++|++++..
T Consensus 83 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~ 134 (285)
T 1wdy_A 83 GSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLR 134 (285)
T ss_dssp TCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred CCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccc
Confidence 9999999999999999999999999999999999999999999999998765
No 75
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.96 E-value=5.6e-29 Score=171.54 Aligned_cols=150 Identities=23% Similarity=0.286 Sum_probs=120.9
Q ss_pred CCCCCcccccCC--CccCCCcccHHHHHHHHHhCCHHHHHHHHH-cCCCCCCCCCCCccHHHHHHhCCC----HHHHHHH
Q 031662 2 EQDADPSINRTQ--TTETSSPENIDALLAAARYDDIEDVISLAS-AGVPLDSKDSQGRTALHMASANGH----LGIVEYL 74 (155)
Q Consensus 2 ~~~~~~~~~~~~--~~~~~~~~~~~~l~~A~~~~~~~~v~~ll~-~~~~~~~~~~~~~~~l~~a~~~~~----~~~~~~l 74 (155)
+.|+++++.... .....+..|.||||+|++.|+.+++++|++ .|++++..+..|.+++++++..+. ..++++|
T Consensus 146 ~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lL 225 (337)
T 4g8k_A 146 KRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLL 225 (337)
T ss_dssp HTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHH
T ss_pred HcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHH
Confidence 356666654432 334556778999999999999999999996 589999898888888887765443 3577888
Q ss_pred HhcCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccCC
Q 031662 75 IGRGVDINASNEEKNTPLHYACLNGHTEVAKKLVLS-GANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELGG 151 (155)
Q Consensus 75 l~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~-~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~ 151 (155)
+++|++++.++..|.||||+|+..++.+++++|++. |++++.+|..|+||||+|+..|+.+++++|+++|++++..+
T Consensus 226 l~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~~~ 303 (337)
T 4g8k_A 226 LDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGD 303 (337)
T ss_dssp HHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTTCC
T ss_pred HHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC
Confidence 888999988888899999999999999999888874 78888888899999999999999999999999988887543
No 76
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.96 E-value=3.4e-30 Score=174.16 Aligned_cols=129 Identities=17% Similarity=0.154 Sum_probs=97.5
Q ss_pred cHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCC-CCHHHHHHhcCc
Q 031662 22 NIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEK-NTPLHYACLNGH 100 (155)
Q Consensus 22 ~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~-~t~l~~a~~~~~ 100 (155)
|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.+++++|+++|++++.++..| .||||+|+..|+
T Consensus 62 g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~ 141 (285)
T 3kea_A 62 NEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLND 141 (285)
T ss_dssp TCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCC
Confidence 6677888888888888888888887777777777888888888888888888888777777777777 677777777777
Q ss_pred HHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccCC
Q 031662 101 TEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELGG 151 (155)
Q Consensus 101 ~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~ 151 (155)
.+++++|+++|++.... ..|.||||+|+..|+.+++++|+++|++++..+
T Consensus 142 ~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~ 191 (285)
T 3kea_A 142 VSIVSYFLSEIPSTFDL-AILLSCIHITIKNGHVDMMILLLDYMTSTNTNN 191 (285)
T ss_dssp HHHHHHHHTTSCTTCCC-STHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTC
T ss_pred HHHHHHHHhCCCccccc-cCCccHHHHHHHcChHHHHHHHHHcCCCCCccc
Confidence 77777777777665322 266777777777777777777777777776554
No 77
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.96 E-value=8.4e-30 Score=162.04 Aligned_cols=127 Identities=26% Similarity=0.212 Sum_probs=115.4
Q ss_pred CcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCC-CCCCCHHHHHHh
Q 031662 19 SPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASN-EEKNTPLHYACL 97 (155)
Q Consensus 19 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~-~~~~t~l~~a~~ 97 (155)
+..|.||||.|++.|+.+++++|++ +.+++.++..|.||||+|+..++.+++++|+++|++++.++ ..|.||||+|+.
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~ 119 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 119 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHh
Confidence 4688999999999999999999999 99999999999999999999999999999999999999988 899999999999
Q ss_pred cCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhh
Q 031662 98 NGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQ 146 (155)
Q Consensus 98 ~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~ 146 (155)
.|+.+++++|+++|++++.+|..|+|||++|++.++.+..+.++..+++
T Consensus 120 ~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~~l~~a~~ 168 (183)
T 3deo_A 120 YVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRR 168 (183)
T ss_dssp TTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHTCCCCSHHHHHHH
T ss_pred cCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccCcccccHHHHHHH
Confidence 9999999999999999999999999999999887554444444444443
No 78
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.96 E-value=4.9e-29 Score=165.11 Aligned_cols=128 Identities=27% Similarity=0.297 Sum_probs=120.6
Q ss_pred CcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCC-CCCCCHHHHHHh
Q 031662 19 SPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASN-EEKNTPLHYACL 97 (155)
Q Consensus 19 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~-~~~~t~l~~a~~ 97 (155)
+..|.||||.|++.|+.+++++|++ +.+++.++..|.||||+|+..++.+++++|+++|++++.++ ..|.||||+|+.
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~ 120 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 120 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHH
Confidence 3578999999999999999999999 99999999999999999999999999999999999999988 889999999999
Q ss_pred cCcHHHHHHHHHcCCCCcccCCCCCCHHHHHH----------------HCCCHHHHHHHHHHHhhc
Q 031662 98 NGHTEVAKKLVLSGANISVLNSHEQTPIDEAL----------------SRGKMDIIDAINTAVAQL 147 (155)
Q Consensus 98 ~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~----------------~~~~~~~~~~L~~~g~~~ 147 (155)
.|+.+++++|+++|++++.++..|+|||++|+ ..|+.+++++|++++.+.
T Consensus 121 ~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~~l~~a~~~g~~~iv~~L~~~~~~~ 186 (244)
T 3ui2_A 121 YVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQVFEY 186 (244)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHEEE
T ss_pred cCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHhccCCCCHHHHHHHcChHHHHHHHHHhcccc
Confidence 99999999999999999999999999999888 668899999999987653
No 79
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.96 E-value=3.4e-29 Score=166.91 Aligned_cols=129 Identities=19% Similarity=0.218 Sum_probs=118.9
Q ss_pred CcccHHHHHHHH---HhCCHHHHHHHHHcCCC-----------CCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCC
Q 031662 19 SPENIDALLAAA---RYDDIEDVISLASAGVP-----------LDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINAS 84 (155)
Q Consensus 19 ~~~~~~~l~~A~---~~~~~~~v~~ll~~~~~-----------~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~ 84 (155)
+..|.||||+|+ +.|+.+++++|++.+.+ ++..+..|.||||+|+..++.+++++|+++|++++.+
T Consensus 43 ~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~ 122 (260)
T 3jxi_A 43 PSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQ 122 (260)
T ss_dssp TTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred cCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCcc
Confidence 366999999999 77999999999998743 3445568999999999999999999999999999999
Q ss_pred C--------------CCCCCHHHHHHhcCcHHHHHHHHH---cCCCCcccCCCCCCHHHHHHHCCC---------HHHHH
Q 031662 85 N--------------EEKNTPLHYACLNGHTEVAKKLVL---SGANISVLNSHEQTPIDEALSRGK---------MDIID 138 (155)
Q Consensus 85 ~--------------~~~~t~l~~a~~~~~~~~~~~Ll~---~~~~~~~~~~~~~t~l~~a~~~~~---------~~~~~ 138 (155)
+ ..|.||||+|+..|+.+++++|++ .|++++.+|..|+||||+|+..++ .++++
T Consensus 123 ~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~ 202 (260)
T 3jxi_A 123 ARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYD 202 (260)
T ss_dssp CEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHH
T ss_pred ccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHH
Confidence 8 689999999999999999999999 999999999999999999998887 79999
Q ss_pred HHHHHHhhc
Q 031662 139 AINTAVAQL 147 (155)
Q Consensus 139 ~L~~~g~~~ 147 (155)
+|+++|+++
T Consensus 203 ~Ll~~ga~~ 211 (260)
T 3jxi_A 203 LLLIKCAKL 211 (260)
T ss_dssp HHHHHHHHH
T ss_pred HHHHhCccc
Confidence 999999998
No 80
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.96 E-value=5.4e-28 Score=162.87 Aligned_cols=130 Identities=25% Similarity=0.374 Sum_probs=121.4
Q ss_pred cccHHHHHHHHHhCCHHHHHHHHHcCCCC------CCCCCCCccHHHHHHhC---CCHHHHHHHHhcCCCCCCCCCCCCC
Q 031662 20 PENIDALLAAARYDDIEDVISLASAGVPL------DSKDSQGRTALHMASAN---GHLGIVEYLIGRGVDINASNEEKNT 90 (155)
Q Consensus 20 ~~~~~~l~~A~~~~~~~~v~~ll~~~~~~------~~~~~~~~~~l~~a~~~---~~~~~~~~ll~~~~~~~~~~~~~~t 90 (155)
....++|+.|++.|+++.++.+++.|.++ +..+..|.||||+|+.. ++.+++++|+++|++++.+|..|.|
T Consensus 128 ~~~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~T 207 (278)
T 1dcq_A 128 AAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGST 207 (278)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCC
T ss_pred chhhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCC
Confidence 34567899999999999999999999884 44578899999999999 8999999999999999999999999
Q ss_pred HHHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhccc
Q 031662 91 PLHYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLEL 149 (155)
Q Consensus 91 ~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~ 149 (155)
|||+|+..|+.+++++|+++|++++.+|..|+|||++|+..|+.+++++|+++|++..-
T Consensus 208 pLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~ 266 (278)
T 1dcq_A 208 ALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGRFN 266 (278)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999987543
No 81
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.96 E-value=3.6e-29 Score=167.99 Aligned_cols=131 Identities=21% Similarity=0.263 Sum_probs=121.0
Q ss_pred CCcccHHHHHHHHHh---CCHHHHHHHHHcCCCC-------C----CCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCC
Q 031662 18 SSPENIDALLAAARY---DDIEDVISLASAGVPL-------D----SKDSQGRTALHMASANGHLGIVEYLIGRGVDINA 83 (155)
Q Consensus 18 ~~~~~~~~l~~A~~~---~~~~~v~~ll~~~~~~-------~----~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~ 83 (155)
.+..|.||||+|+.. |+.+++++|++.|++. + ..+..|.||||+|+..++.+++++|+++|++++.
T Consensus 50 ~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~ 129 (273)
T 2pnn_A 50 DPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQA 129 (273)
T ss_dssp CTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred cCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCc
Confidence 467899999999987 9999999999987542 2 2566899999999999999999999999999999
Q ss_pred CCC--------------CCCCHHHHHHhcCcHHHHHHHHH---cCCCCcccCCCCCCHHHHHHHCCC---------HHHH
Q 031662 84 SNE--------------EKNTPLHYACLNGHTEVAKKLVL---SGANISVLNSHEQTPIDEALSRGK---------MDII 137 (155)
Q Consensus 84 ~~~--------------~~~t~l~~a~~~~~~~~~~~Ll~---~~~~~~~~~~~~~t~l~~a~~~~~---------~~~~ 137 (155)
++. .|.||||+|+..|+.+++++|++ +|++++.+|..|+||||+|+..|+ .+++
T Consensus 130 ~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v 209 (273)
T 2pnn_A 130 AANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMY 209 (273)
T ss_dssp CBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHH
T ss_pred cccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHH
Confidence 987 79999999999999999999999 999999999999999999999988 8999
Q ss_pred HHHHHHHhhcc
Q 031662 138 DAINTAVAQLE 148 (155)
Q Consensus 138 ~~L~~~g~~~~ 148 (155)
++|+++|++++
T Consensus 210 ~~Ll~~ga~~n 220 (273)
T 2pnn_A 210 NEILILGAKLH 220 (273)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHhhhhcc
Confidence 99999999986
No 82
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.96 E-value=1.9e-28 Score=176.74 Aligned_cols=129 Identities=22% Similarity=0.297 Sum_probs=119.4
Q ss_pred cHHHHHHHHHhCCHHHHHHHHHcCCCCCCC------CCCCccHHHHHHh---CCCHHHHHHHHhcCCCCCCCCCCCCCHH
Q 031662 22 NIDALLAAARYDDIEDVISLASAGVPLDSK------DSQGRTALHMASA---NGHLGIVEYLIGRGVDINASNEEKNTPL 92 (155)
Q Consensus 22 ~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~------~~~~~~~l~~a~~---~~~~~~~~~ll~~~~~~~~~~~~~~t~l 92 (155)
..+.|+.|+..|+++.++.|++.|++++.. +..|.||||+||. .++.+++++|+++|++++.+|..|.|||
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpL 211 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTAL 211 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHH
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHH
Confidence 447899999999999999999999999877 7889999999966 8899999999999999999999999999
Q ss_pred HHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccC
Q 031662 93 HYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELG 150 (155)
Q Consensus 93 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~ 150 (155)
|+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..
T Consensus 212 h~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~ 269 (497)
T 3lvq_E 212 HYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFAF 269 (497)
T ss_dssp HHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-----
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999998753
No 83
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.96 E-value=4e-28 Score=165.14 Aligned_cols=128 Identities=23% Similarity=0.318 Sum_probs=121.5
Q ss_pred cccHHHHHHHHHhCCHHHHHHHHHcCCCCCC------CCCCCccHHHHHHhC---CCHHHHHHHHhcCCCCCCCCCCCCC
Q 031662 20 PENIDALLAAARYDDIEDVISLASAGVPLDS------KDSQGRTALHMASAN---GHLGIVEYLIGRGVDINASNEEKNT 90 (155)
Q Consensus 20 ~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~------~~~~~~~~l~~a~~~---~~~~~~~~ll~~~~~~~~~~~~~~t 90 (155)
....++|+.|+..|+++.++++++.+.+++. .+..|.||||+|+.. ++.+++++|+++|++++.+|..|.|
T Consensus 149 ~~~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~T 228 (301)
T 2b0o_E 149 TPEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNT 228 (301)
T ss_dssp C-CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCC
T ss_pred CchHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCC
Confidence 3456889999999999999999999999987 688899999999997 8899999999999999999999999
Q ss_pred HHHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhc
Q 031662 91 PLHYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQL 147 (155)
Q Consensus 91 ~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~ 147 (155)
|||+|+..|+.+++++|+++|++++.+|..|.|||++|+..++.+++++|+++|++.
T Consensus 229 pLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~~ 285 (301)
T 2b0o_E 229 ALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGT 285 (301)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCC
Confidence 999999999999999999999999999999999999999999999999999999984
No 84
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.96 E-value=6.2e-28 Score=166.46 Aligned_cols=134 Identities=29% Similarity=0.456 Sum_probs=126.8
Q ss_pred CCcccHHHHHHHHHhCCHHHHHHHHHc-CCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHH
Q 031662 18 SSPENIDALLAAARYDDIEDVISLASA-GVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYAC 96 (155)
Q Consensus 18 ~~~~~~~~l~~A~~~~~~~~v~~ll~~-~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~ 96 (155)
.+..+.++|+.|++.|+.+.++.++.. +.+++..+..|.||||+|+..++.+++++|+++|++++.++..|.||||+|+
T Consensus 20 ~~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 99 (351)
T 3utm_A 20 TGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNAC 99 (351)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred eccccchhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHH
Confidence 345788999999999999999998886 7888999999999999999999999999999999999999999999999999
Q ss_pred hcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccCC
Q 031662 97 LNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELGG 151 (155)
Q Consensus 97 ~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~ 151 (155)
..|+.+++++|+++|++++.++..|.|||++|+..|+.+++++|+++|++++..+
T Consensus 100 ~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 154 (351)
T 3utm_A 100 SYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVN 154 (351)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred HCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccc
Confidence 9999999999999999999999999999999999999999999999999987654
No 85
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.96 E-value=1.2e-28 Score=172.25 Aligned_cols=139 Identities=22% Similarity=0.253 Sum_probs=72.8
Q ss_pred CCCccCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCH-----------------------
Q 031662 12 TQTTETSSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHL----------------------- 68 (155)
Q Consensus 12 ~~~~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~----------------------- 68 (155)
+.+++..+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..++.
T Consensus 156 ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g 235 (373)
T 2fo1_E 156 GADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNG 235 (373)
T ss_dssp CCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTS
T ss_pred CCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCC
Confidence 334444445555555555555555555555555555554444444444444444433
Q ss_pred ----------------HHHHHHHhcCCCCCC--------CCCCCCCHHHHHHhcCcHHHHHHHHHcC-CCCcccCCCCCC
Q 031662 69 ----------------GIVEYLIGRGVDINA--------SNEEKNTPLHYACLNGHTEVAKKLVLSG-ANISVLNSHEQT 123 (155)
Q Consensus 69 ----------------~~~~~ll~~~~~~~~--------~~~~~~t~l~~a~~~~~~~~~~~Ll~~~-~~~~~~~~~~~t 123 (155)
+++++|+++|++++. ++..|.||||+|+..|+.+++++|++.+ ++++.+|..|+|
T Consensus 236 ~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~T 315 (373)
T 2fo1_E 236 MTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKT 315 (373)
T ss_dssp CCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCC
T ss_pred CCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCC
Confidence 344444444444433 3334555555555555555555555543 555555555566
Q ss_pred HHHHHHHCCCHHHHHHHHHHHhhcccC
Q 031662 124 PIDEALSRGKMDIIDAINTAVAQLELG 150 (155)
Q Consensus 124 ~l~~a~~~~~~~~~~~L~~~g~~~~~~ 150 (155)
|||+|+..|+.+++++|+++|++++..
T Consensus 316 pL~~A~~~g~~~iv~~Ll~~gad~~~~ 342 (373)
T 2fo1_E 316 PIMLAAQEGRIEVVMYLIQQGASVEAV 342 (373)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCSSCC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCccCC
Confidence 666666666666666666655555543
No 86
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.96 E-value=4.3e-28 Score=159.37 Aligned_cols=127 Identities=26% Similarity=0.414 Sum_probs=64.8
Q ss_pred cHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCc-
Q 031662 22 NIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACLNGH- 100 (155)
Q Consensus 22 ~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~~~- 100 (155)
+.|||+.|+..|+.+++++|++.|.+++..+..|.||||+|+..++.+++++|+++|++++.++..|.||+|+|+..++
T Consensus 76 ~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~ 155 (240)
T 3eu9_A 76 NSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHS 155 (240)
T ss_dssp TBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCS
T ss_pred CCChhHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCCh
Confidence 4455555555555555555555555555555555555555555555555555555555555555444444444443333
Q ss_pred HHHHHHHHHcCCCCcccCC-CCCCHHHHHHHCCCHHHHHHHHHHHhhcc
Q 031662 101 TEVAKKLVLSGANISVLNS-HEQTPIDEALSRGKMDIIDAINTAVAQLE 148 (155)
Q Consensus 101 ~~~~~~Ll~~~~~~~~~~~-~~~t~l~~a~~~~~~~~~~~L~~~g~~~~ 148 (155)
.+++++|++.|++++..+. .|.|||++|+..|+.+++++|+++|++++
T Consensus 156 ~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 204 (240)
T 3eu9_A 156 VDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVD 204 (240)
T ss_dssp STTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTT
T ss_pred HHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 3444444444444444443 44444444444444444444444444443
No 87
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.96 E-value=2.5e-28 Score=170.54 Aligned_cols=114 Identities=18% Similarity=0.233 Sum_probs=105.3
Q ss_pred HHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcC---C
Q 031662 36 EDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACLNGHTEVAKKLVLSG---A 112 (155)
Q Consensus 36 ~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~---~ 112 (155)
..++.+++.|.+++..+..|.||||+|+..++.+++++|+++|++++.++..|.||||+|+..|+.+++++|++.+ +
T Consensus 147 ~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~ 226 (373)
T 2fo1_E 147 HEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKG 226 (373)
T ss_dssp HHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHH
T ss_pred HHHHHHHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCcccc
Confidence 3467889999999999999999999999999999999999999999999999999999999999999999999887 7
Q ss_pred CCcccCCCCCCHHHHHHHCC---CHHHHHHHHHHHhhccc
Q 031662 113 NISVLNSHEQTPIDEALSRG---KMDIIDAINTAVAQLEL 149 (155)
Q Consensus 113 ~~~~~~~~~~t~l~~a~~~~---~~~~~~~L~~~g~~~~~ 149 (155)
+++..+..|.|||++|+..+ +.+++++|+++|++++.
T Consensus 227 ~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~ 266 (373)
T 2fo1_E 227 DIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDY 266 (373)
T ss_dssp TTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSC
T ss_pred ChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCccc
Confidence 88888999999999999887 78999999999988875
No 88
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.96 E-value=9e-28 Score=167.08 Aligned_cols=128 Identities=23% Similarity=0.331 Sum_probs=121.1
Q ss_pred CcccHHHHHHHHHh-CCHHHHHHHHHcCCCCCCCC--CCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHH
Q 031662 19 SPENIDALLAAARY-DDIEDVISLASAGVPLDSKD--SQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYA 95 (155)
Q Consensus 19 ~~~~~~~l~~A~~~-~~~~~v~~ll~~~~~~~~~~--~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a 95 (155)
...+.++||.|+.. ++++++++|++.|++++..+ ..|.||||+|+..++.+++++|+++|++++.+|..|.||||+|
T Consensus 196 ~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A 275 (368)
T 3jue_A 196 SLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHA 275 (368)
T ss_dssp -CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred cCCCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Confidence 34566899999999 99999999999999999888 7899999999999999999999999999999999999999999
Q ss_pred HhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhh
Q 031662 96 CLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQ 146 (155)
Q Consensus 96 ~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~ 146 (155)
+..|+.+++++|+++|++++.+|..|.|||++|+..++.+++++|+..+..
T Consensus 276 ~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~ 326 (368)
T 3jue_A 276 TILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMR 326 (368)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-
T ss_pred HHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999999999999999998743
No 89
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.96 E-value=2e-27 Score=156.12 Aligned_cols=133 Identities=23% Similarity=0.346 Sum_probs=88.5
Q ss_pred CCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCC-CCCCCHHHHHH
Q 031662 18 SSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASN-EEKNTPLHYAC 96 (155)
Q Consensus 18 ~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~-~~~~t~l~~a~ 96 (155)
.+..+.++|+.|++.|+.+++++|++.|.+++..+..|.||||+|+..++.+++++|++.+.+++..+ ..+.|||++|+
T Consensus 5 ~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~ 84 (240)
T 3eu9_A 5 IDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWAT 84 (240)
T ss_dssp CSCGGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHH
T ss_pred cccccchHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHH
Confidence 34555666677777777777777777666666666666677777777777777777776666665433 33666777777
Q ss_pred hcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccC
Q 031662 97 LNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELG 150 (155)
Q Consensus 97 ~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~ 150 (155)
..++.+++++|++.|++++.++..|.|||++|+..|+.+++++|+++|++++..
T Consensus 85 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~ 138 (240)
T 3eu9_A 85 RQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMM 138 (240)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred HcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCcccc
Confidence 777777777777666666666666667777777766777777777666666543
No 90
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.95 E-value=3e-27 Score=134.64 Aligned_cols=92 Identities=39% Similarity=0.659 Sum_probs=75.0
Q ss_pred CccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCH
Q 031662 55 GRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKM 134 (155)
Q Consensus 55 ~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~ 134 (155)
|+||||+|+..++.+++++|++.|++++.+|..|.||||+|+..++.+++++|+++|++++.+|..|+|||++|+..|+.
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~ 81 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHL 81 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCH
Confidence 67788888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred HHHHHHHHHHhh
Q 031662 135 DIIDAINTAVAQ 146 (155)
Q Consensus 135 ~~~~~L~~~g~~ 146 (155)
+++++|+++|++
T Consensus 82 ~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 82 EVVKLLLEAGAY 93 (93)
T ss_dssp HHHHHHHHTTCC
T ss_pred HHHHHHHHcCCC
Confidence 888888887764
No 91
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.95 E-value=3.7e-26 Score=157.45 Aligned_cols=132 Identities=24% Similarity=0.320 Sum_probs=125.8
Q ss_pred cccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCC-CccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhc
Q 031662 20 PENIDALLAAARYDDIEDVISLASAGVPLDSKDSQ-GRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACLN 98 (155)
Q Consensus 20 ~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~ 98 (155)
..+.|+|+.|++.|++++|++|+++|+++|.++.. |+||||+|+..++.+++++|+++|++++.++..+.++++.++..
T Consensus 23 ~~~~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~ 102 (337)
T 4g8k_A 23 VEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIA 102 (337)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred CCCChHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhc
Confidence 46789999999999999999999999999988764 89999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccCC
Q 031662 99 GHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELGG 151 (155)
Q Consensus 99 ~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~~ 151 (155)
+...+...+++.+++++..+..|.||+++|+..|+.+++++|+++|++++...
T Consensus 103 ~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~ 155 (337)
T 4g8k_A 103 GSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRR 155 (337)
T ss_dssp TCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred ccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhh
Confidence 99999999999999999999999999999999999999999999999987643
No 92
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.94 E-value=8.1e-28 Score=153.25 Aligned_cols=130 Identities=22% Similarity=0.228 Sum_probs=115.6
Q ss_pred ccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCC-CCCccHHHHHHhCCCH----HHHHHHHhcCCCCCCCCCCCCCHHHHH
Q 031662 21 ENIDALLAAARYDDIEDVISLASAGVPLDSKD-SQGRTALHMASANGHL----GIVEYLIGRGVDINASNEEKNTPLHYA 95 (155)
Q Consensus 21 ~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~-~~~~~~l~~a~~~~~~----~~~~~ll~~~~~~~~~~~~~~t~l~~a 95 (155)
.++++|+.|++.|+++.++.++..+.+ ..+ ..|+||||+|+..++. +++++|+++|++++.++..|+||||+|
T Consensus 5 ~~~~~l~~Aa~~g~~~~~~~l~~~~~~--~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a 82 (186)
T 3t8k_A 5 SEYRTVSAAAMLGTYEDFLELFEKGYE--DKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPL 82 (186)
T ss_dssp HHCSSHHHHHHHSCHHHHHHHHHHSSS--CHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHH
T ss_pred ccccHHHHHHHcCCHHHHHHHHhcCcc--cccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Confidence 345679999999999999999988753 445 6699999999999975 589999999999999999999999999
Q ss_pred HhcCc------HHHHHHHHHcCCCCcccCCCCC-CHHHHHHHCCC-----HHHHHHHHH-HHhhcccCCC
Q 031662 96 CLNGH------TEVAKKLVLSGANISVLNSHEQ-TPIDEALSRGK-----MDIIDAINT-AVAQLELGGF 152 (155)
Q Consensus 96 ~~~~~------~~~~~~Ll~~~~~~~~~~~~~~-t~l~~a~~~~~-----~~~~~~L~~-~g~~~~~~~~ 152 (155)
+..++ .+++++|+++|++++.+|..|+ ||||+|+..+. .+++++|++ +|++++..+.
T Consensus 83 ~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~ 152 (186)
T 3t8k_A 83 FQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDK 152 (186)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCT
T ss_pred HHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCC
Confidence 99887 5889999999999999999999 99999999543 569999999 9999987764
No 93
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.94 E-value=3.4e-26 Score=130.28 Aligned_cols=93 Identities=44% Similarity=0.643 Sum_probs=88.7
Q ss_pred ccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCc
Q 031662 21 ENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACLNGH 100 (155)
Q Consensus 21 ~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~~~ 100 (155)
.|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.+++++|+++|++++.+|..|.||||+|+..++
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~ 80 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence 36789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCC
Q 031662 101 TEVAKKLVLSGAN 113 (155)
Q Consensus 101 ~~~~~~Ll~~~~~ 113 (155)
.+++++|+++|++
T Consensus 81 ~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 81 LEVVKLLLEAGAY 93 (93)
T ss_dssp HHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCCC
Confidence 9999999999874
No 94
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.94 E-value=5.6e-26 Score=137.97 Aligned_cols=107 Identities=30% Similarity=0.473 Sum_probs=99.6
Q ss_pred CCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCH
Q 031662 45 GVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACLNGHTEVAKKLVLSGANISVLNSHEQTP 124 (155)
Q Consensus 45 ~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~ 124 (155)
|.++ .++..|.||||+|+..++.+++++|++.|++++.++..|.||||+|+..++.+++++|+++|++++.++..|+||
T Consensus 1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~ 79 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSP 79 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCH
T ss_pred CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCH
Confidence 3455 578889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCCHHHHHHHHHHHhhcccCCC
Q 031662 125 IDEALSRGKMDIIDAINTAVAQLELGGF 152 (155)
Q Consensus 125 l~~a~~~~~~~~~~~L~~~g~~~~~~~~ 152 (155)
||+|+..|+.+++++|+++|++++..+.
T Consensus 80 L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 107 (137)
T 3c5r_A 80 LHDAAKNGHVDIVKLLLSYGASRNAVNI 107 (137)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCC
Confidence 9999999999999999999999987654
No 95
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.94 E-value=1.2e-26 Score=136.94 Aligned_cols=108 Identities=34% Similarity=0.511 Sum_probs=86.4
Q ss_pred CCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHh
Q 031662 18 SSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACL 97 (155)
Q Consensus 18 ~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~ 97 (155)
.+..|.||||+|+..|+.+++++|++.+.+++..+..|.||||+|+..++.+++++|+++|++++.+|..|.|||++|+.
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~ 84 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKK 84 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHHT
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHH
Confidence 45677788888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred cCcHHHHHHHHHcCCCCcccCCCCCCHH
Q 031662 98 NGHTEVAKKLVLSGANISVLNSHEQTPI 125 (155)
Q Consensus 98 ~~~~~~~~~Ll~~~~~~~~~~~~~~t~l 125 (155)
.++.+++++|+++|++++.++..+.+|-
T Consensus 85 ~~~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 85 NGHHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp TTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred CCCHHHHHHHHHcCCCCCcCCccccccc
Confidence 8888888888888888888877777763
No 96
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.93 E-value=4.7e-26 Score=138.21 Aligned_cols=107 Identities=24% Similarity=0.352 Sum_probs=102.1
Q ss_pred CCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcccCCC-CCC
Q 031662 45 GVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACLNGHTEVAKKLVLSGANISVLNSH-EQT 123 (155)
Q Consensus 45 ~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~-~~t 123 (155)
+++++..+..|.||||+|+..++.+++++|++.|++++.++..|.||||+|+. ++.+++++|+++|++++.++.. |+|
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t 80 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTR 80 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBC
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCC
Confidence 46788899999999999999999999999999999999999999999999999 9999999999999999999999 999
Q ss_pred HHHHHHHCCCHHHHHHHHHHHhhcccCCC
Q 031662 124 PIDEALSRGKMDIIDAINTAVAQLELGGF 152 (155)
Q Consensus 124 ~l~~a~~~~~~~~~~~L~~~g~~~~~~~~ 152 (155)
|||+|+..|+.+++++|+++|++++..+.
T Consensus 81 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~ 109 (136)
T 1d9s_A 81 PVHDAAREGFLDTLVVLHRAGARLDVCDA 109 (136)
T ss_dssp HHHHHHHHTCHHHHHHHHHTCCCCCCCSS
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCccCC
Confidence 99999999999999999999999887654
No 97
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.93 E-value=5.6e-26 Score=134.09 Aligned_cols=104 Identities=33% Similarity=0.526 Sum_probs=98.8
Q ss_pred CCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Q 031662 50 SKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEAL 129 (155)
Q Consensus 50 ~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~ 129 (155)
.+|..|.|+||+|+..++.+++++|++.|++++.+|..|.||||+|+..++.+++++|+++|++++.++..|+|||++|+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~ 83 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAK 83 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HCCCHHHHHHHHHHHhhcccCCCc
Q 031662 130 SRGKMDIIDAINTAVAQLELGGFT 153 (155)
Q Consensus 130 ~~~~~~~~~~L~~~g~~~~~~~~~ 153 (155)
..++.+++++|+++|++++..+..
T Consensus 84 ~~~~~~~~~~Ll~~ga~~n~~~~~ 107 (115)
T 2l6b_A 84 KNGHHEIVKLLDAKGADVNARSWG 107 (115)
T ss_dssp TTTCHHHHHHHHTTSSSHHHHSCC
T ss_pred HCCCHHHHHHHHHcCCCCCcCCcc
Confidence 999999999999999999866543
No 98
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.93 E-value=3.1e-26 Score=142.03 Aligned_cols=118 Identities=15% Similarity=0.144 Sum_probs=94.6
Q ss_pred ccCCCccCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCcc-HHHHHHhCCCHHHHHHHHhcCCCCCCCCCCC
Q 031662 10 NRTQTTETSSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRT-ALHMASANGHLGIVEYLIGRGVDINASNEEK 88 (155)
Q Consensus 10 ~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~-~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~ 88 (155)
+.+.++...+..|.||||+|+ .|+.+++++|++.|++++.++..|.| |||+|+..++.+++++|+++|++++.++..|
T Consensus 33 ~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g 111 (156)
T 1bi7_B 33 EAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWG 111 (156)
T ss_dssp TTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTC
T ss_pred HcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCCCC
Confidence 345556667788999999986 99999999999999999999999999 9999999999999999999999999999999
Q ss_pred CCHHHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHH
Q 031662 89 NTPLHYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEA 128 (155)
Q Consensus 89 ~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a 128 (155)
.||||+|+..++.+++++|+++|++++.++..|.||.+-+
T Consensus 112 ~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 112 RLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp CCHHHHHHHHTCHHHHHHHSSCC-----------------
T ss_pred CCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccccC
Confidence 9999999999999999999999999999999999997633
No 99
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.93 E-value=4.4e-25 Score=131.70 Aligned_cols=102 Identities=28% Similarity=0.396 Sum_probs=94.7
Q ss_pred CCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHH
Q 031662 51 KDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALS 130 (155)
Q Consensus 51 ~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~ 130 (155)
.+..+.++||+|+..++.+++++|++.+.+++.++..|.||||+|+..++.+++++|++.|++++.+|..|+||||+|+.
T Consensus 3 ~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~ 82 (123)
T 3aaa_C 3 LGSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVY 82 (123)
T ss_dssp ----CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHH
T ss_pred cccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHH
Confidence 35668899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHhhcccCCC
Q 031662 131 RGKMDIIDAINTAVAQLELGGF 152 (155)
Q Consensus 131 ~~~~~~~~~L~~~g~~~~~~~~ 152 (155)
.++.+++++|+++|++++..+.
T Consensus 83 ~~~~~~v~~Ll~~ga~~~~~~~ 104 (123)
T 3aaa_C 83 EGHVSCVKLLLSKGADKTVKGP 104 (123)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCT
T ss_pred cCCHHHHHHHHHcCCCCCCcCC
Confidence 9999999999999999887654
No 100
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.92 E-value=2.2e-25 Score=151.65 Aligned_cols=111 Identities=23% Similarity=0.183 Sum_probs=98.4
Q ss_pred CCcccHHHHHHHHHh---CCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHH
Q 031662 18 SSPENIDALLAAARY---DDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHY 94 (155)
Q Consensus 18 ~~~~~~~~l~~A~~~---~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~ 94 (155)
.+..|.||||+|+.. ++++++++|++.|++++.+|..|.||||+|+..++.+++++|+++|++++.+|..|.|||++
T Consensus 186 ~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~ 265 (301)
T 2b0o_E 186 AQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDI 265 (301)
T ss_dssp SCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHH
T ss_pred cCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHH
Confidence 467899999999997 89999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCH
Q 031662 95 ACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKM 134 (155)
Q Consensus 95 a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~ 134 (155)
|+..++.+++++|++.|++ .|.||||+|+..|+.
T Consensus 266 A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 266 ARKKHHKECEELLEQAQAG------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp HHHHTCHHHHHHHHHHHHH------TTSSCCC--------
T ss_pred HHHcCCHHHHHHHHHhcCC------CCCChhHHHHhcCCc
Confidence 9999999999999998765 578999999998764
No 101
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.92 E-value=3.7e-26 Score=159.43 Aligned_cols=126 Identities=17% Similarity=0.141 Sum_probs=103.8
Q ss_pred cccHHHHHHHHHhCCHHHHHHHHHcCCCC---CCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCC---CCCCCCCCCHHH
Q 031662 20 PENIDALLAAARYDDIEDVISLASAGVPL---DSKDSQGRTALHMASANGHLGIVEYLIGRGVDI---NASNEEKNTPLH 93 (155)
Q Consensus 20 ~~~~~~l~~A~~~~~~~~v~~ll~~~~~~---~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~---~~~~~~~~t~l~ 93 (155)
..+.||||.|++.|+.+++++|++.+... +..+..+.||||+|+..|+.+++++|+++|+++ +..+.. .||||
T Consensus 90 ~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh 168 (376)
T 2aja_A 90 IKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFR 168 (376)
T ss_dssp CCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHH
T ss_pred CCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHH
Confidence 34569999999999999999999998732 233445788999999999999999999999752 222223 89999
Q ss_pred HHHhcCcHHHHHHHHHcCCCCcc--cCCCCCCHHHHHH-HCCCHHHHHHHHHHHhh
Q 031662 94 YACLNGHTEVAKKLVLSGANISV--LNSHEQTPIDEAL-SRGKMDIIDAINTAVAQ 146 (155)
Q Consensus 94 ~a~~~~~~~~~~~Ll~~~~~~~~--~~~~~~t~l~~a~-~~~~~~~~~~L~~~g~~ 146 (155)
+|+..|+.+++++|+++|++++. .+..|.|||++|+ ..|+.+++++|++.|++
T Consensus 169 ~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~ 224 (376)
T 2aja_A 169 LAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVM 224 (376)
T ss_dssp HHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHH
T ss_pred HHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCCc
Confidence 99999999999999999999887 8888999999999 99999999999988764
No 102
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.91 E-value=5.5e-24 Score=139.65 Aligned_cols=113 Identities=24% Similarity=0.178 Sum_probs=97.5
Q ss_pred HHHHHHcCCCCCCC---CCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCC
Q 031662 38 VISLASAGVPLDSK---DSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACLNGHTEVAKKLVLSGANI 114 (155)
Q Consensus 38 v~~ll~~~~~~~~~---~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~ 114 (155)
++.|++++.+++.. +..+.|+||+|+..++.+++++|++.|++++.+|..|.||||+|+..|+.+++++|++.|+++
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~ 80 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANV 80 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 45678888776544 345678899999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhcccC
Q 031662 115 SVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLELG 150 (155)
Q Consensus 115 ~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~~ 150 (155)
+.+|..|+|||++|+..|+.+++++|+++|++++..
T Consensus 81 n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~ 116 (229)
T 2vge_A 81 NSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFAT 116 (229)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCC
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc
Confidence 999999999999999999999999999999999765
No 103
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.91 E-value=5.4e-24 Score=129.10 Aligned_cols=102 Identities=26% Similarity=0.346 Sum_probs=94.9
Q ss_pred ccCCCccCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCC
Q 031662 10 NRTQTTETSSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKN 89 (155)
Q Consensus 10 ~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~ 89 (155)
+.+.+.+..+..|.||||+|+..++.+++++|++.+++++..+..|.||||+|+..++.+++++|+++|++++.+|..|.
T Consensus 35 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 114 (136)
T 2jab_A 35 ANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGK 114 (136)
T ss_dssp HTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred HcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcCcCCCCC
Confidence 34455566778899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHhcCcHHHHHHHHHcC
Q 031662 90 TPLHYACLNGHTEVAKKLVLSG 111 (155)
Q Consensus 90 t~l~~a~~~~~~~~~~~Ll~~~ 111 (155)
|||++|+..++.+++++|+++|
T Consensus 115 tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 115 TAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp CHHHHHHHTTCHHHHHHHHHC-
T ss_pred CHHHHHHHCCCHHHHHHHHHcC
Confidence 9999999999999999999875
No 104
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.91 E-value=2e-24 Score=148.51 Aligned_cols=122 Identities=14% Similarity=0.065 Sum_probs=110.0
Q ss_pred HHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCc--
Q 031662 24 DALLAAARYDDIEDVISLASAGVPLDS-KDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACLNGH-- 100 (155)
Q Consensus 24 ~~l~~A~~~~~~~~v~~ll~~~~~~~~-~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~~~-- 100 (155)
..+|.|+..+..+++++|++.|.+++. ++..|.||||+|+..++.+++++|+++|++++.+|..|.||||+|+..|+
T Consensus 99 ~~~~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~ 178 (327)
T 1sw6_A 99 QQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNY 178 (327)
T ss_dssp -----CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHH
T ss_pred chhHHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccc
Confidence 345788888888999999999999999 89999999999999999999999999999999999999999999999998
Q ss_pred -HHHHHHHHHcC-CCCcccCCCCCCHHHHHHH----CCCHHHHHHHHHHHh
Q 031662 101 -TEVAKKLVLSG-ANISVLNSHEQTPIDEALS----RGKMDIIDAINTAVA 145 (155)
Q Consensus 101 -~~~~~~Ll~~~-~~~~~~~~~~~t~l~~a~~----~~~~~~~~~L~~~g~ 145 (155)
.++++.|++.+ ++++.++..|+||||+|+. .|+.+++++|++.++
T Consensus 179 ~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~ 229 (327)
T 1sw6_A 179 DSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILM 229 (327)
T ss_dssp HTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHH
Confidence 67888888876 7799999999999999999 999999999999964
No 105
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.91 E-value=2.1e-23 Score=124.43 Aligned_cols=103 Identities=40% Similarity=0.579 Sum_probs=96.5
Q ss_pred cCCCccCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCC
Q 031662 11 RTQTTETSSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNT 90 (155)
Q Consensus 11 ~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t 90 (155)
.+......+..+.||||.|+..++.+++++|++.+.+++.++..|.||||+|+..++.+++++|+++|++++.++..|.|
T Consensus 24 ~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t 103 (126)
T 1n0r_A 24 AGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRT 103 (126)
T ss_dssp HTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred cCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCcccCCCCCC
Confidence 34455566778999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCcHHHHHHHHHcCCC
Q 031662 91 PLHYACLNGHTEVAKKLVLSGAN 113 (155)
Q Consensus 91 ~l~~a~~~~~~~~~~~Ll~~~~~ 113 (155)
|+++|+..++.+++++|+++|++
T Consensus 104 ~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 104 PLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHHHHHHcCcHHHHHHHHHcCCC
Confidence 99999999999999999999875
No 106
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.90 E-value=1.7e-23 Score=132.87 Aligned_cols=115 Identities=29% Similarity=0.309 Sum_probs=104.2
Q ss_pred CCCccCCCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCC-CCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCC
Q 031662 12 TQTTETSSPENIDALLAAARYDDIEDVISLASAGVPLDSKD-SQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNT 90 (155)
Q Consensus 12 ~~~~~~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~-~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t 90 (155)
+.+++..+..|.||||+|+..|+.+++++|++.|++++.++ ..|.||||+|+..++.+++++|+++|++++.+|..|.|
T Consensus 66 ~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t 145 (183)
T 3deo_A 66 DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLT 145 (183)
T ss_dssp TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCC
T ss_pred cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcCCCCCCCC
Confidence 45566678899999999999999999999999999999888 88999999999999999999999999999999999999
Q ss_pred HHHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHH
Q 031662 91 PLHYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTA 143 (155)
Q Consensus 91 ~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~ 143 (155)
||++|+..++. ..+.+++++|+..|+.+++++|.++
T Consensus 146 pl~~A~~~~~~-----------------~~~~~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 146 ALELAREILKT-----------------TPKGNPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp HHHHHHHHHHT-----------------CCCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHhccC-----------------cccccHHHHHHHcCHHHHHHHHHHh
Confidence 99999874322 4568999999999999999999764
No 107
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.90 E-value=4.2e-23 Score=120.91 Aligned_cols=90 Identities=32% Similarity=0.478 Sum_probs=48.5
Q ss_pred CCcccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHh
Q 031662 18 SSPENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACL 97 (155)
Q Consensus 18 ~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~ 97 (155)
.+..+.++||+|+..|+.+++++|++.+++++.++..|.||||+|+..++.+++++|+++|++++.+|..|.|||++|+.
T Consensus 20 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~ 99 (110)
T 2zgd_A 20 MGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISID 99 (110)
T ss_dssp --CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred cCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHHHH
Confidence 34455555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred cCcHHHHHHH
Q 031662 98 NGHTEVAKKL 107 (155)
Q Consensus 98 ~~~~~~~~~L 107 (155)
.++.+++++|
T Consensus 100 ~~~~~~~~~L 109 (110)
T 2zgd_A 100 NGNEDLAEIL 109 (110)
T ss_dssp HTCHHHHHHH
T ss_pred cCCHHHHHHh
Confidence 5555555543
No 108
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.90 E-value=7.7e-26 Score=157.83 Aligned_cols=125 Identities=18% Similarity=0.147 Sum_probs=109.6
Q ss_pred CCCcccHHHHHHHHHhCCHHHHHHHHHcCCCC---CCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCC--CCCCCCCH
Q 031662 17 TSSPENIDALLAAARYDDIEDVISLASAGVPL---DSKDSQGRTALHMASANGHLGIVEYLIGRGVDINA--SNEEKNTP 91 (155)
Q Consensus 17 ~~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~---~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~--~~~~~~t~ 91 (155)
..+..+.||||+|++.|+.+++++|++.|+++ +..+.. .||||+|+..|+.+++++|+++|++++. .+..|.||
T Consensus 123 ~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~Tp 201 (376)
T 2aja_A 123 VIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYA 201 (376)
T ss_dssp --CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHH
T ss_pred HhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCH
Confidence 34567889999999999999999999999752 222233 8999999999999999999999999877 78889999
Q ss_pred HHHHH-hcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHHHhhccc
Q 031662 92 LHYAC-LNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINTAVAQLEL 149 (155)
Q Consensus 92 l~~a~-~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~g~~~~~ 149 (155)
||+|+ ..|+.+++++|++.|+ .+.||+++|+..|+.+++++|+++|++++.
T Consensus 202 L~~Aa~~~G~~eiv~~Ll~~ga-------~~~taL~~Aa~~g~~evv~lL~~~ga~~~~ 253 (376)
T 2aja_A 202 FRWAAVGRGHHNVINFLLDCPV-------MLAYAEIHEFEYGEKYVNPFIARHVNRLKE 253 (376)
T ss_dssp HHHHHSTTCCHHHHHHHTTSHH-------HHHHHHHCTTTTTTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHhCCC-------ccchHHHHHHHCCCHHHHHHHHhcCccccc
Confidence 99999 9999999999998763 378999999999999999999999998753
No 109
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.90 E-value=2.5e-23 Score=135.72 Aligned_cols=101 Identities=22% Similarity=0.345 Sum_probs=96.0
Q ss_pred CCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHc-CCCCcccCCCCCCHHHHHHH
Q 031662 52 DSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACLNGHTEVAKKLVLS-GANISVLNSHEQTPIDEALS 130 (155)
Q Consensus 52 ~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~-~~~~~~~~~~~~t~l~~a~~ 130 (155)
+..|.|+||+|+..++.+++++|++.|++++.+|..|.||||+|+..|+.+++++|++. |++++.++..|+||||+|+.
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~ 149 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAW 149 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHH
T ss_pred ccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHH
Confidence 34568999999999999999999999999999999999999999999999999999998 99999999999999999999
Q ss_pred CCCHHHHHHHHHHHhhcccCCC
Q 031662 131 RGKMDIIDAINTAVAQLELGGF 152 (155)
Q Consensus 131 ~~~~~~~~~L~~~g~~~~~~~~ 152 (155)
.|+.+++++|+++|++++..+.
T Consensus 150 ~~~~~~v~~Ll~~ga~~~~~~~ 171 (222)
T 3ehr_A 150 KGYADIVQLLLAKGARTDLRNI 171 (222)
T ss_dssp HTCHHHHHHHHHHTCCSCCCCT
T ss_pred cCCHHHHHHHHHcCCCCccccC
Confidence 9999999999999999987654
No 110
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.90 E-value=3.8e-23 Score=149.22 Aligned_cols=106 Identities=23% Similarity=0.197 Sum_probs=91.7
Q ss_pred CcccHHHHHHHHH---hCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHH
Q 031662 19 SPENIDALLAAAR---YDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYA 95 (155)
Q Consensus 19 ~~~~~~~l~~A~~---~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a 95 (155)
+..|.||||+|++ .|+.+++++|++.|++++.+|..|.||||+|+..++.+++++|+++|++++.+|..|.||||+|
T Consensus 168 ~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A 247 (497)
T 3lvq_E 168 QAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIA 247 (497)
T ss_dssp CCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHH
T ss_pred ccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHH
Confidence 6789999999977 8999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCcHHHHHHHHHcCCCCcccCCCCCCH
Q 031662 96 CLNGHTEVAKKLVLSGANISVLNSHEQTP 124 (155)
Q Consensus 96 ~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~ 124 (155)
+..|+.+++++|+++|++++....+..++
T Consensus 248 ~~~~~~~~~~~Ll~~ga~~~~~~~h~~~~ 276 (497)
T 3lvq_E 248 RKKHHKECEELLEQAQAGTFAFPLHVDYS 276 (497)
T ss_dssp HHTTCHHHHHHHHHTCC------------
T ss_pred HHcCCHHHHHHHHHhCCCCCCCcceeecc
Confidence 99999999999999999988754433333
No 111
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.89 E-value=2.6e-22 Score=117.51 Aligned_cols=92 Identities=29% Similarity=0.448 Sum_probs=86.1
Q ss_pred CCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHH
Q 031662 49 DSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEA 128 (155)
Q Consensus 49 ~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a 128 (155)
...+..|.|+||+|+..++.+++++|++.|++++.+|..|.||||+|+..++.+++++|+++|++++.++..|+|||++|
T Consensus 18 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A 97 (110)
T 2zgd_A 18 SHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDIS 97 (110)
T ss_dssp ----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred cccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHH
Confidence 34677899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHCCCHHHHHHH
Q 031662 129 LSRGKMDIIDAI 140 (155)
Q Consensus 129 ~~~~~~~~~~~L 140 (155)
+..|+.+++++|
T Consensus 98 ~~~~~~~~~~~L 109 (110)
T 2zgd_A 98 IDNGNEDLAEIL 109 (110)
T ss_dssp HHHTCHHHHHHH
T ss_pred HHcCCHHHHHHh
Confidence 999999999987
No 112
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.89 E-value=9.7e-23 Score=134.85 Aligned_cols=99 Identities=18% Similarity=0.213 Sum_probs=94.0
Q ss_pred CCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcccC-CCCCCHHHHHHHC
Q 031662 53 SQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPLHYACLNGHTEVAKKLVLSGANISVLN-SHEQTPIDEALSR 131 (155)
Q Consensus 53 ~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~-~~~~t~l~~a~~~ 131 (155)
..|.||||+|+..++.+++++|++ +++++.+|..|.||||+|+..|+.+++++|+++|++++.++ ..|+||||+|+..
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~ 121 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGY 121 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHT
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHc
Confidence 457899999999999999999999 99999999999999999999999999999999999999988 8899999999999
Q ss_pred CCHHHHHHHHHHHhhcccCCC
Q 031662 132 GKMDIIDAINTAVAQLELGGF 152 (155)
Q Consensus 132 ~~~~~~~~L~~~g~~~~~~~~ 152 (155)
|+.+++++|+++|++++..+.
T Consensus 122 g~~~~v~~Ll~~ga~~~~~d~ 142 (244)
T 3ui2_A 122 VRPEVVEALVELGADIEVEDE 142 (244)
T ss_dssp TCHHHHHHHHHTTCCTTCCCT
T ss_pred CCHHHHHHHHHCCCCCCCCCC
Confidence 999999999999999987654
No 113
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.89 E-value=1.2e-22 Score=141.46 Aligned_cols=138 Identities=22% Similarity=0.287 Sum_probs=93.4
Q ss_pred cCCCccCCC--cccHHHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCC
Q 031662 11 RTQTTETSS--PENIDALLAAARYDDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEK 88 (155)
Q Consensus 11 ~~~~~~~~~--~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~ 88 (155)
.+.+++..+ ..|.||||+|+..|+.+++++|++.|++++..|..|.||||+|+..++.+++++|+++|++++.+|..|
T Consensus 222 ~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d~~G 301 (368)
T 3jue_A 222 HGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEG 301 (368)
T ss_dssp TTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred cCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCCCCcCCCC
Confidence 334444444 788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHhcCcHHHHHHHHHcC---CCCcccCCCCCCHHHHHHHCCC--HHHHHHHHHHHhhcc
Q 031662 89 NTPLHYACLNGHTEVAKKLVLSG---ANISVLNSHEQTPIDEALSRGK--MDIIDAINTAVAQLE 148 (155)
Q Consensus 89 ~t~l~~a~~~~~~~~~~~Ll~~~---~~~~~~~~~~~t~l~~a~~~~~--~~~~~~L~~~g~~~~ 148 (155)
.||||+|+..++.+++++|++.+ .+....+..+.|+++++..... .+-.+.|..++.+++
T Consensus 302 ~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~~~~~~~~~ekl~r~~~~~~ 366 (368)
T 3jue_A 302 RDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDFSLMASDDPEKLSRRSHDLH 366 (368)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHHC-----------------------------------------
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHHHhhcCCCHHHHHhcCCCcC
Confidence 99999999999999999999765 3344556677888888776543 344566776666554
No 114
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.88 E-value=3.2e-22 Score=134.73 Aligned_cols=99 Identities=23% Similarity=0.226 Sum_probs=93.6
Q ss_pred cCCCcccHHHHHHHHHh---CCHHHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHHHhcCCCCCCCCCCCCCHH
Q 031662 16 ETSSPENIDALLAAARY---DDIEDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYLIGRGVDINASNEEKNTPL 92 (155)
Q Consensus 16 ~~~~~~~~~~l~~A~~~---~~~~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l 92 (155)
...+..|.||||+|+.. ++.+++++|++.|++++.+|..|.||||+|+..++.+++++|+++|++++.+|..|.|||
T Consensus 163 ~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL 242 (278)
T 1dcq_A 163 ANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPL 242 (278)
T ss_dssp SSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred cccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHH
Confidence 33467799999999999 899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCcHHHHHHHHHcCCCC
Q 031662 93 HYACLNGHTEVAKKLVLSGANI 114 (155)
Q Consensus 93 ~~a~~~~~~~~~~~Ll~~~~~~ 114 (155)
|+|+..|+.+++++|+++|++.
T Consensus 243 ~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 243 DIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp HHHHHTTCHHHHHHHHHHHTTC
T ss_pred HHHHHcCCHHHHHHHHHcCCCC
Confidence 9999999999999999998753
No 115
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=73.06 E-value=20 Score=25.62 Aligned_cols=49 Identities=16% Similarity=0.203 Sum_probs=39.5
Q ss_pred HHHHhCCHHHHHHHHHcCCCCCCC--------------CCCCccHHHHHHhCCCHHHHHHHHh
Q 031662 28 AAARYDDIEDVISLASAGVPLDSK--------------DSQGRTALHMASANGHLGIVEYLIG 76 (155)
Q Consensus 28 ~A~~~~~~~~v~~ll~~~~~~~~~--------------~~~~~~~l~~a~~~~~~~~~~~ll~ 76 (155)
+.+-.|+...|+..+..|.+.+.+ -..|.|.+|.|+++.+.+++..|+.
T Consensus 28 ~gv~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 28 VGVVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp HHHHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhh
Confidence 445689999999999998876432 2358999999999999999888876
No 116
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=71.45 E-value=3.5 Score=18.42 Aligned_cols=19 Identities=32% Similarity=0.288 Sum_probs=14.7
Q ss_pred HHHHHHHhCCHHHHHHHHH
Q 031662 25 ALLAAARYDDIEDVISLAS 43 (155)
Q Consensus 25 ~l~~A~~~~~~~~v~~ll~ 43 (155)
.+..||..|+.+.++.|-.
T Consensus 16 qiyvA~seGd~etv~~Le~ 34 (40)
T 1gp8_A 16 QMDAAASKGDVETYRKLKA 34 (40)
T ss_dssp HHHHHHTTSCHHHHHHHHH
T ss_pred HHHHHHhcCCHHHHHHHHH
Confidence 3678888899988887744
No 117
>3qil_A Clathrin heavy chain 1; clathrin trimerization domain, endocytosis, structural prote; 3.92A {Bos taurus}
Probab=38.85 E-value=17 Score=21.03 Aligned_cols=37 Identities=19% Similarity=0.220 Sum_probs=26.5
Q ss_pred CCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCC
Q 031662 78 GVDINASNEEKNTPLHYACLNGHTEVAKKLVLSGANI 114 (155)
Q Consensus 78 ~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~ 114 (155)
.+.+..+|+--.-++-.|+..++.++++-|++...+.
T Consensus 25 SI~L~KkDkLykDAietAa~S~d~elaEeLL~yFVe~ 61 (125)
T 3qil_A 25 SVELAKKDSLYKDAMQYASESKDTELAEELLQWFLQE 61 (125)
T ss_dssp CCCCCSCCCCSSHHHHTTTSSCCSHHHHHHHHHHTTS
T ss_pred HHHHHHhcccHHHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 3455566666677888888899988888887754433
No 118
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=32.32 E-value=96 Score=22.51 Aligned_cols=101 Identities=11% Similarity=0.048 Sum_probs=53.1
Q ss_pred HHHHHHHHcCCCCCCCCCCCccHHHHHHhCCCHHHHHHH----HhcCCCCCCCCCCCCCHHHHHHhcCcHHHHHHH----
Q 031662 36 EDVISLASAGVPLDSKDSQGRTALHMASANGHLGIVEYL----IGRGVDINASNEEKNTPLHYACLNGHTEVAKKL---- 107 (155)
Q Consensus 36 ~~v~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l----l~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L---- 107 (155)
++++.+...|..++.... .+.+...+..|+.+....+ .+.|..++... -.+.+...+..|+.+-+..+
T Consensus 91 ~lf~~M~~~G~~Pd~~ty--n~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~t--yn~lI~~~~~~g~~~~A~~l~~~M 166 (501)
T 4g26_A 91 DIFKQMIVDKVVPNEATF--TNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRS--YGPALFGFCRKGDADKAYEVDAHM 166 (501)
T ss_dssp HHHHHHHHTTCCCCHHHH--HHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHH--HHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCHHHH--HHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccce--ehHHHHHHHHCCCHHHHHHHHHHH
Confidence 456666677765543321 2345555677776544333 34555544322 12344556777876654433
Q ss_pred HHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHH
Q 031662 108 VLSGANISVLNSHEQTPIDEALSRGKMDIIDAINT 142 (155)
Q Consensus 108 l~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~ 142 (155)
.+.|..++.... .+.+...++.|..+-+.-+++
T Consensus 167 ~~~G~~Pd~~ty--~~Li~~~~~~g~~d~A~~ll~ 199 (501)
T 4g26_A 167 VESEVVPEEPEL--AALLKVSMDTKNADKVYKTLQ 199 (501)
T ss_dssp HHTTCCCCHHHH--HHHHHHHHHTTCHHHHHHHHH
T ss_pred HhcCCCCCHHHH--HHHHHHHhhCCCHHHHHHHHH
Confidence 355666554321 234556667777665444443
No 119
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=28.87 E-value=1.6e+02 Score=21.17 Aligned_cols=62 Identities=19% Similarity=0.183 Sum_probs=38.6
Q ss_pred HhCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHH
Q 031662 63 SANGHLGIVEYLIGRGVDINASNEEKNTPLHYACLNGHTEVAKKLVLSGANISVLNSHEQTPIDEALSRGKMDIIDAINT 142 (155)
Q Consensus 63 ~~~~~~~~~~~ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~ 142 (155)
+..|+...++..+..|.+++.+ -|..-.+ |+ +..+ . -..|.|..|+|++..+.+++..|+.
T Consensus 30 v~e~~~~~ve~y~~~gg~~~r~----lt~~e~~-----------ll-n~~~--a-f~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 30 VVEGDLAAIEAYKSSGGDIARQ----LTADEVR-----------LL-NRPS--A-FDVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp HHHTCHHHHHHHHTTTCCTTCC----CCHHHHH-----------HH-CCTT--T-CCTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHcCChhHHHHHHhcCCchhcc----cCHHHHH-----------Hh-CCCc--c-cccCchhhhhhhhhhhhhHHHHhhh
Confidence 3557778888777777766543 1222222 12 2222 2 2457888888888888888888876
Q ss_pred H
Q 031662 143 A 143 (155)
Q Consensus 143 ~ 143 (155)
-
T Consensus 91 ~ 91 (454)
T 3zrh_A 91 E 91 (454)
T ss_dssp H
T ss_pred c
Confidence 4
Done!