Query 031663
Match_columns 155
No_of_seqs 130 out of 191
Neff 5.0
Searched_HMMs 13730
Date Mon Mar 25 05:15:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031663.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/031663hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1a79a2 d.75.1.1 (A:9-82) Tetr 98.2 8.8E-07 6.4E-11 59.8 4.5 37 5-41 35-71 (74)
2 d1r0va2 c.52.2.1 (A:215-305) D 97.4 5.3E-06 3.8E-10 57.4 -1.6 29 48-76 2-33 (91)
3 d1a79a1 c.52.2.1 (A:83-179) Te 97.1 1.9E-05 1.4E-09 54.7 -1.5 30 47-76 2-34 (97)
4 d1r0va3 d.75.1.1 (A:140-214) D 37.7 9.2 0.00067 23.8 2.2 17 9-25 44-60 (75)
5 d1w4ta1 d.3.1.5 (A:1-277) Aryl 32.4 1.6 0.00012 33.5 -2.7 42 26-67 50-93 (277)
6 d1e2ta_ d.3.1.5 (A:) Arylamine 26.8 1.3 9.6E-05 34.1 -4.1 42 26-67 47-90 (274)
7 d2bsza1 d.3.1.5 (A:6-275) Aryl 25.0 2.3 0.00017 32.5 -3.0 43 26-68 45-89 (270)
8 d1h3fa1 c.26.1.1 (A:5-347) Tyr 18.2 46 0.0034 25.4 3.6 27 8-41 3-29 (343)
9 d1mzba_ a.4.5.42 (A:) Ferric u 17.6 11 0.00077 25.2 -0.4 38 27-66 29-69 (134)
10 d1w5ra1 d.3.1.5 (A:3-275) Aryl 17.1 8.4 0.00061 29.1 -1.2 39 30-68 49-89 (273)
No 1
>d1a79a2 d.75.1.1 (A:9-82) Tetrameric tRNA splicing endonuclease, N-terminal domain {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=98.16 E-value=8.8e-07 Score=59.78 Aligned_cols=37 Identities=19% Similarity=0.204 Sum_probs=32.8
Q ss_pred cchhHHHHHHHHhhCCEEEecCCCcccCHHHHHHHHh
Q 031663 5 TAQLRRLCRFLAEIGALYLLDNNDLCLPLKEIYEKIA 41 (155)
Q Consensus 5 ~~~lpeEaLYL~ErG~L~v~~~~g~~lSlq~~y~~~~ 41 (155)
-.|=|.||+||+++|.|+|.+.+|+.||++++++++.
T Consensus 35 l~Ls~~EalYLl~~gkl~v~~~~gk~lsfe~l~~~a~ 71 (74)
T d1a79a2 35 LSLSLVEALYLINLGWLEVKYKDNKPLSFEELYEYAR 71 (74)
T ss_dssp EEEEHHHHHHHHHHTCEEEECSSSSCCCHHHHHHHHH
T ss_pred EEEeHHHHHHHHhcCcEEEecCCCCCCCHHHHHHHHh
Confidence 3466999999999999999887899999999999853
No 2
>d1r0va2 c.52.2.1 (A:215-305) Dimeric tRNA splicing endonuclease, domains 2 and 4 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=97.40 E-value=5.3e-06 Score=57.38 Aligned_cols=29 Identities=34% Similarity=0.531 Sum_probs=27.0
Q ss_pred cceeeeeeccccCccEEee---ecCCCceeec
Q 031663 48 SWELFEVYRHLKSLGYIVG---RHGVPWIVKI 76 (155)
Q Consensus 48 ~~~~Y~VY~~Lkr~GYIV~---R~g~~~~~~~ 76 (155)
+..+|.||++||++||+|+ |||++|.+|.
T Consensus 2 F~~~y~vy~~lr~~G~vv~~G~KfG~df~vY~ 33 (91)
T d1r0va2 2 FDRRYEVYRNLKERGFVVKTGFKFGSEFRVYR 33 (91)
T ss_dssp HHHHHHHHHHHHHTTCEEEECGGGTSSEEEES
T ss_pred hHHHhHHHHHHHHCCCEECCCcccCccEEEEc
Confidence 5678999999999999999 9999999994
No 3
>d1a79a1 c.52.2.1 (A:83-179) Tetrameric tRNA splicing endonuclease, C-terminal domain {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=97.10 E-value=1.9e-05 Score=54.72 Aligned_cols=30 Identities=27% Similarity=0.421 Sum_probs=27.2
Q ss_pred CcceeeeeeccccCccEEee---ecCCCceeec
Q 031663 47 CSWELFEVYRHLKSLGYIVG---RHGVPWIVKI 76 (155)
Q Consensus 47 ~~~~~Y~VY~~Lkr~GYIV~---R~g~~~~~~~ 76 (155)
.+..+|.||++||++||+|+ +||++|.+|.
T Consensus 2 ~~~~ky~Vy~dLr~rG~~v~~G~kfG~df~vY~ 34 (97)
T d1a79a1 2 RLCLKYLVYKDLRTRGYIVKTGLKYGADFRLYE 34 (97)
T ss_dssp THHHHHHHHHHHHHTTCEEEECGGGTSSEEEEC
T ss_pred chhhhhHHHHHHHHCCCEEeecccCCeeEEEEe
Confidence 35678999999999999998 9999999994
No 4
>d1r0va3 d.75.1.1 (A:140-214) Dimeric tRNA splicing endonuclease, domains 1 and 3 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=37.71 E-value=9.2 Score=23.83 Aligned_cols=17 Identities=29% Similarity=0.450 Sum_probs=15.3
Q ss_pred HHHHHHHHhhCCEEEec
Q 031663 9 RRLCRFLAEIGALYLLD 25 (155)
Q Consensus 9 peEaLYL~ErG~L~v~~ 25 (155)
-+|.|||+..|.|.+.+
T Consensus 44 lieslylldlgklnlln 60 (75)
T d1r0va3 44 LIESLYLLDLGKLNLLN 60 (75)
T ss_dssp HHHHHHHHHHTCEEETT
T ss_pred HHHHHHHHccccccccc
Confidence 47999999999999975
No 5
>d1w4ta1 d.3.1.5 (A:1-277) Arylamine N-acetyltransferase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=32.44 E-value=1.6 Score=33.47 Aligned_cols=42 Identities=19% Similarity=0.325 Sum_probs=31.5
Q ss_pred CCCcccCHHHHHHHHhc-ccCC-CcceeeeeeccccCccEEeee
Q 031663 26 NNDLCLPLKEIYEKIAN-EKSG-CSWELFEVYRHLKSLGYIVGR 67 (155)
Q Consensus 26 ~~g~~lSlq~~y~~~~~-~~~~-~~~~~Y~VY~~Lkr~GYIV~R 67 (155)
.....|+++++++.+.. +++| |+..+-+-+.-|+.+||-|..
T Consensus 50 g~~i~ld~~~l~~kiV~~~rGGyC~E~N~Lf~~lL~~LGf~v~~ 93 (277)
T d1w4ta1 50 DRPIEIDADKVFAKVVEGSRGGYCFELNSLFARLLLALGYELEL 93 (277)
T ss_dssp TCCCCCSHHHHHHHHTTTTCCBCHHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCCCHHHHHHHHHhcCCCccchhhhHHHHHHHHHcCCceEE
Confidence 45677999999999874 3445 455666666669999999983
No 6
>d1e2ta_ d.3.1.5 (A:) Arylamine N-acetyltransferase {Salmonella typhimurium [TaxId: 90371]}
Probab=26.84 E-value=1.3 Score=34.14 Aligned_cols=42 Identities=21% Similarity=0.266 Sum_probs=32.1
Q ss_pred CCCcccCHHHHHHHHhc-ccCC-CcceeeeeeccccCccEEeee
Q 031663 26 NNDLCLPLKEIYEKIAN-EKSG-CSWELFEVYRHLKSLGYIVGR 67 (155)
Q Consensus 26 ~~g~~lSlq~~y~~~~~-~~~~-~~~~~Y~VY~~Lkr~GYIV~R 67 (155)
.....|+++++++.+.. +++| |+..+-+.+.-|+.+||-|..
T Consensus 47 g~~i~ld~~~l~~kiV~~~rGGyC~ElN~lf~~lL~~LGF~v~~ 90 (274)
T d1e2ta_ 47 PREIQLDETALEEKLLYARRGGYCFELNGLFERALRDIGFNVRS 90 (274)
T ss_dssp TCCCCCSTTHHHHHHTTTCCCBCHHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCccCCHHHHHHHHhhcCCCccchhhHHHHHHHHHHcCCceEE
Confidence 45678999999999874 3444 566666777779999999974
No 7
>d2bsza1 d.3.1.5 (A:6-275) Arylamine N-acetyltransferase {Rhizobium loti [TaxId: 381]}
Probab=25.04 E-value=2.3 Score=32.50 Aligned_cols=43 Identities=28% Similarity=0.409 Sum_probs=31.8
Q ss_pred CCCcccCHHHHHHHHhc-ccCC-CcceeeeeeccccCccEEeeec
Q 031663 26 NNDLCLPLKEIYEKIAN-EKSG-CSWELFEVYRHLKSLGYIVGRH 68 (155)
Q Consensus 26 ~~g~~lSlq~~y~~~~~-~~~~-~~~~~Y~VY~~Lkr~GYIV~R~ 68 (155)
.....++.+++++.+.. +++| |+..+-+.+.-|+.+||-|...
T Consensus 45 ~~~~~ld~~~l~~kiV~~~rGG~C~E~N~lf~~lL~~LGF~v~~~ 89 (270)
T d2bsza1 45 GRPVRLDLAALQDKIVLGGRGGYCFEHNLLFMHALKALGFEVGGL 89 (270)
T ss_dssp TCCCCCSHHHHHHHHTTSCCCBCHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CCCcCCCHHHHHHHHHhcCCcccchhhhHHHHHHHHHcCCceEEE
Confidence 45678999999998764 3444 5556666667799999999743
No 8
>d1h3fa1 c.26.1.1 (A:5-347) Tyrosyl-tRNA synthetase (TyrRS) {Thermus thermophilus [TaxId: 274]}
Probab=18.19 E-value=46 Score=25.37 Aligned_cols=27 Identities=22% Similarity=0.238 Sum_probs=19.8
Q ss_pred hHHHHHHHHhhCCEEEecCCCcccCHHHHHHHHh
Q 031663 8 LRRLCRFLAEIGALYLLDNNDLCLPLKEIYEKIA 41 (155)
Q Consensus 8 lpeEaLYL~ErG~L~v~~~~g~~lSlq~~y~~~~ 41 (155)
-|||.+-|++||..+++ +-+++-+.+.
T Consensus 3 ~~ee~~~l~~R~~~e~~-------~~eel~~~l~ 29 (343)
T d1h3fa1 3 TPEEALALLKRGAEEIV-------PEEELLAKLK 29 (343)
T ss_dssp CHHHHHHHHHTTCSEEE-------THHHHHHHHH
T ss_pred CHHHHHHHHHcCchhcC-------CHHHHHHHHh
Confidence 49999999999987775 3355555544
No 9
>d1mzba_ a.4.5.42 (A:) Ferric uptake regulation protein, FUR {Pseudomonas aeruginosa [TaxId: 287]}
Probab=17.59 E-value=11 Score=25.19 Aligned_cols=38 Identities=21% Similarity=0.452 Sum_probs=28.5
Q ss_pred CCcccCHHHHHHHHhcccCCCcceeeeeecc---ccCccEEee
Q 031663 27 NDLCLPLKEIYEKIANEKSGCSWELFEVYRH---LKSLGYIVG 66 (155)
Q Consensus 27 ~g~~lSlq~~y~~~~~~~~~~~~~~Y~VY~~---Lkr~GYIV~ 66 (155)
.+.++|.+++|+.+.. .+.....-.||+. |.+.|-|..
T Consensus 29 ~~~h~sa~ei~~~l~~--~~~~i~~aTVYR~L~~l~e~gli~~ 69 (134)
T d1mzba_ 29 EQRHMSAEDVYKALME--AGEDVGLATVYRVLTQFEAAGLVVR 69 (134)
T ss_dssp -CCSBCHHHHHHHHHH--TTCCCCHHHHHHHHHHHHHHTSEEE
T ss_pred CCCCCCHHHHHHHHHH--hCCCccHHHHHHHHHHHHhccEEEE
Confidence 4568999999999763 3456777788887 567787765
No 10
>d1w5ra1 d.3.1.5 (A:3-275) Arylamine N-acetyltransferase {Mycobacterium smegmatis [TaxId: 1772]}
Probab=17.10 E-value=8.4 Score=29.10 Aligned_cols=39 Identities=21% Similarity=0.225 Sum_probs=28.6
Q ss_pred ccCHHHHHHHHhc-ccCC-CcceeeeeeccccCccEEeeec
Q 031663 30 CLPLKEIYEKIAN-EKSG-CSWELFEVYRHLKSLGYIVGRH 68 (155)
Q Consensus 30 ~lSlq~~y~~~~~-~~~~-~~~~~Y~VY~~Lkr~GYIV~R~ 68 (155)
.++++++++.+.. +++| |+..+-+.+.-|+.+||-|...
T Consensus 49 ~ld~~~l~~kiV~~~rGGyC~E~N~lf~~~L~~LGf~v~~~ 89 (273)
T d1w5ra1 49 DLSAEALFAKLVDRRRGGYQYEHNGLLGYVLEELGFEVERL 89 (273)
T ss_dssp CCSHHHHHHHHTTTCCCBCHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CCCHHHHHHHHHhcCCcccchhhhHHHHHHHHHcCCceEEE
Confidence 3899999998863 3455 4555555666699999999844
Done!