Query 031672
Match_columns 155
No_of_seqs 109 out of 824
Neff 6.5
Searched_HMMs 46136
Date Fri Mar 29 03:47:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031672.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/031672hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF02365 NAM: No apical merist 100.0 1.2E-43 2.6E-48 262.9 7.5 111 8-118 1-129 (129)
2 cd00490 Met_repressor_MetJ Met 43.7 28 0.00061 24.6 2.8 34 15-53 50-85 (103)
3 PRK05264 transcriptional repre 40.3 31 0.00066 24.5 2.6 34 15-53 51-86 (105)
4 PHA00692 hypothetical protein 37.2 13 0.00029 24.2 0.4 9 7-15 36-44 (74)
5 PF01340 MetJ: Met Apo-repress 36.1 32 0.00069 24.3 2.1 34 15-53 50-85 (104)
6 PF07960 CBP4: CBP4; InterPro 34.0 20 0.00044 26.8 0.9 16 15-30 30-49 (128)
7 PF13822 ACC_epsilon: Acyl-CoA 33.1 22 0.00048 22.9 0.9 9 15-23 10-18 (62)
8 PF07131 DUF1382: Protein of u 30.7 56 0.0012 21.3 2.4 20 10-29 22-48 (61)
9 PF05865 Cypo_polyhedrin: Cypo 30.4 65 0.0014 25.5 3.3 27 71-97 141-168 (248)
10 PRK02079 pyrroloquinoline quin 24.2 45 0.00097 23.1 1.2 15 1-15 1-15 (88)
11 COG3060 MetJ Transcriptional r 23.8 59 0.0013 22.8 1.8 35 15-53 51-86 (105)
12 PF01473 CW_binding_1: Putativ 23.5 52 0.0011 15.8 1.1 8 54-61 7-14 (19)
13 COG4741 Predicted secreted end 22.5 32 0.0007 26.8 0.3 15 5-19 95-109 (175)
14 COG0020 UppS Undecaprenyl pyro 22.5 48 0.001 27.3 1.3 41 18-60 172-216 (245)
15 smart00707 RPEL Repeat in Dros 20.6 69 0.0015 17.3 1.3 13 11-23 6-18 (26)
16 PF08990 Docking: Erythronolid 20.4 56 0.0012 17.8 0.9 14 16-29 2-15 (27)
No 1
>PF02365 NAM: No apical meristem (NAM) protein; InterPro: IPR003441 The NAC domain (for Petunia hybrida (Petunia) NAM and for Arabidopsis ATAF1, ATAF2, and CUC2) is an N-terminal module of ~160 amino acids, which is found in proteins of the NAC family of plant-specific transcriptional regulators (no apical meristem (NAM) proteins) []. NAC proteins are involved in developmental processes, including formation of the shoot apical meristem, floral organs and lateral shoots, as well as in plant hormonal control and defence. The NAC domain is accompanied by diverse C-terminal transcriptional activation domains. The NAC domain has been shown to be a DNA-binding domain (DBD) and a dimerization domain [,]. The NAC domain can be subdivided into five subdomains (A-E). Each subdomain is distinguishable by blocks of heterogeneous amino acids or gaps. While the NAC domains were rich in basic amino acids (R, K and H) as a whole, the distribution of positive and negative amino acids in each subdomain were unequal. Subdomains C and D are rich in basic amino acids but poor in acidic amino acids, while subdomain B contains a high proportion of acidic amino acids. Putative nuclear localization signals (NLS) have been detected in subdomains C and D []. The DBD is contained within a 60 amino acid region located within subdomains D and E []. The overall structure of the NAC domain monomer consists of a very twisted antiparallel beta-sheet, which packs against an N-terminal alpha-helix on one side and one shorter helix on the other side surrounded by a few helical elements. The structure suggests that the NAC domain mediates dimerization through conserved interactions including a salt bridge, and DNA binding through the NAC dimer face rich in positive charges [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1UT4_A 3SWM_B 4DUL_B 3SWP_D 1UT7_B 3ULX_A.
Probab=100.00 E-value=1.2e-43 Score=262.92 Aligned_cols=111 Identities=39% Similarity=0.801 Sum_probs=92.8
Q ss_pred CCCCeeEcCChHHHHH-HHHHHHcCCCCCC-CceeecCCCCCCCCCCC------CCceEEEEeec---------ccccCC
Q 031672 8 TPIDVDFASTDENLFG-SLERMIRGSPLPC-NVINDVNPYNHRPSNLP------DGVWYLVCSKE---------NTSAQH 70 (155)
Q Consensus 8 lp~G~RF~PtDeELv~-YL~~ki~g~plp~-~~I~~~Dvy~~~Pw~L~------~~~wyFF~~~~---------~r~~~~ 70 (155)
|||||||+|||+|||. ||++|+.|.+++. ++|+++|||+.|||+|+ +++||||++++ +|++++
T Consensus 1 LP~G~rF~PtD~ELi~~yL~~k~~g~~~~~~~~i~~~Diy~~~P~~L~~~~~~~~~~~yFF~~~~~~~~~~~r~~R~~~~ 80 (129)
T PF02365_consen 1 LPPGFRFRPTDEELINHYLRPKILGEPLPCEDVIHDVDIYSAHPWELPAKFKGGDEEWYFFSPRKKKYPNGGRPNRVTGG 80 (129)
T ss_dssp --TTEEE---HHHHHHCTHHHHHTT-HHCS-CHSEE--GGGS-GGGCHHHSSS-SSEEEEEEE----------S-EEETT
T ss_pred CCCceEecCChHHHHHHHHHHHhcCCCCCcccceeecccCccChHHhhhhccCCCceEEEEEecccccCCcccccccccc
Confidence 8999999999999999 9999999999887 89999999999999999 67999999996 568899
Q ss_pred CeEEecCcceeEee-CCeEEEEEEEEeeeeCcCCCCCCcCeEEEEEEeC
Q 031672 71 GQWRAKGETCEIFS-NSYIIGWRTTLEFFEGQVPNERKTDWVMQEFRIT 118 (155)
Q Consensus 71 G~Wk~~g~~~~I~~-~g~~iG~k~~l~f~~~~~~~~~kT~W~M~EY~l~ 118 (155)
|+||++|+.++|.+ +|.+||+|++|+||.++.+++.+|+|+||||+|.
T Consensus 81 G~Wk~~g~~~~i~~~~g~~iG~k~~l~f~~~~~~~~~kt~W~M~EY~L~ 129 (129)
T PF02365_consen 81 GYWKSTGKEKPIKDPGGKVIGFKKTLVFYSGKSPNGKKTGWVMHEYSLE 129 (129)
T ss_dssp EEEEEECEEEEEEE-TTCEEEEEEEEEEEESSTTS-EEEEEEEEEEEE-
T ss_pred eEEeecccccccccccceeeeeEEEEEEEeccCCCCCcCCeEEEEEEeC
Confidence 99999999999999 8999999999999998888899999999999984
No 2
>cd00490 Met_repressor_MetJ Met Repressor, MetJ. MetJ is a bacterial regulatory protein that uses S-adenosylmethionine (SAM) as a corepressor to regulate the production of Methionine. MetJ binds arrays of two to five adjacent copies of an eight base-pair 'metbox' sequence. MetJ forms sufficiently strong interactions with the sugar-phosphate backbone to accomodate sequence variation in natural operators. However, it is very sensitive to particular base changes in the operator. MetJ exists as a homodimer.
Probab=43.74 E-value=28 Score=24.59 Aligned_cols=34 Identities=26% Similarity=0.523 Sum_probs=26.1
Q ss_pred cCChHHHHH--HHHHHHcCCCCCCCceeecCCCCCCCCCCC
Q 031672 15 ASTDENLFG--SLERMIRGSPLPCNVINDVNPYNHRPSNLP 53 (155)
Q Consensus 15 ~PtDeELv~--YL~~ki~g~plp~~~I~~~Dvy~~~Pw~L~ 53 (155)
|-|..||++ || .-..|+|||.+ .|+-...|.++|
T Consensus 50 HATNSELLCEAFL-HAfTGQPLP~D----~Dl~K~~~d~iP 85 (103)
T cd00490 50 HATNSELLCEAFL-HAFTGQPLPDD----ADLRKERSDEIP 85 (103)
T ss_pred hcccHHHHHHHHH-HHhcCCCCCCh----hhhhhcCccccc
Confidence 467889999 55 45689999965 377777788877
No 3
>PRK05264 transcriptional repressor protein MetJ; Provisional
Probab=40.28 E-value=31 Score=24.53 Aligned_cols=34 Identities=26% Similarity=0.504 Sum_probs=26.0
Q ss_pred cCChHHHHH--HHHHHHcCCCCCCCceeecCCCCCCCCCCC
Q 031672 15 ASTDENLFG--SLERMIRGSPLPCNVINDVNPYNHRPSNLP 53 (155)
Q Consensus 15 ~PtDeELv~--YL~~ki~g~plp~~~I~~~Dvy~~~Pw~L~ 53 (155)
|-|..||++ || .-..|+|||.+ .|+-...|.++|
T Consensus 51 HATNSELLCEAFL-HA~TGQPLP~D----~Dl~Kd~~d~ip 86 (105)
T PRK05264 51 HATNSELLCEAFL-HAFTGQPLPDD----EDLRKERSDEIP 86 (105)
T ss_pred hcccHHHHHHHHH-HHHcCCCCCCh----hhhhhcCcccch
Confidence 567889999 65 45689999965 377777787777
No 4
>PHA00692 hypothetical protein
Probab=37.17 E-value=13 Score=24.24 Aligned_cols=9 Identities=22% Similarity=0.398 Sum_probs=7.6
Q ss_pred CCCCCeeEc
Q 031672 7 STPIDVDFA 15 (155)
Q Consensus 7 ~lp~G~RF~ 15 (155)
..||||||-
T Consensus 36 eyppgfrfg 44 (74)
T PHA00692 36 EYPPGFRFG 44 (74)
T ss_pred ecCCCcccc
Confidence 579999994
No 5
>PF01340 MetJ: Met Apo-repressor, MetJ; InterPro: IPR002084 Binding of a specific DNA fragment and S-adenosyl methionine (SAM) co-repressor molecules to the Escherichia coli methionine repressor (MetJ) leads to a significant reduction in dynamic flexibility of the ternary complex, with considerable entropy-enthalpy compensation, not necessarily involving any overall conformational change []. MetJ is a regulatory protein which when combined with S-adenosylmethionine (SAM) represses the expression of the methionine regulon and of enzymes involved in SAM synthesis. It is also autoregulated. The crystal structure of the met repressor-operator complex shows two dimeric repressor molecules bound to adjacent sites 8 base pairs apart on an 18-base-pair DNA fragment. Sequence specificity is achieved by insertion of double-stranded antiparallel protein beta-ribbons into the major groove of B-form DNA, with direct hydrogen-bonding between amino-acid side chains and the base pairs. The repressor also recognises sequence-dependent distortion or flexibility of the operator phosphate backbone, conferring specificity even for inaccessible base pairs [].; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent, 0006555 methionine metabolic process; PDB: 1MJO_D 1CMB_A 1MJQ_C 1CMC_B 1MJK_A 1MJ2_A 1MJP_A 1MJM_B 1CMA_B 1MJL_A ....
Probab=36.14 E-value=32 Score=24.33 Aligned_cols=34 Identities=29% Similarity=0.591 Sum_probs=19.3
Q ss_pred cCChHHHHH--HHHHHHcCCCCCCCceeecCCCCCCCCCCC
Q 031672 15 ASTDENLFG--SLERMIRGSPLPCNVINDVNPYNHRPSNLP 53 (155)
Q Consensus 15 ~PtDeELv~--YL~~ki~g~plp~~~I~~~Dvy~~~Pw~L~ 53 (155)
|-|..||+. || .-..|+|||.+ .|+-...|.++|
T Consensus 50 HATNSeLLcEAFL-HAfTGQPLP~D----~dl~kd~~d~ip 85 (104)
T PF01340_consen 50 HATNSELLCEAFL-HAFTGQPLPTD----DDLRKDRPDEIP 85 (104)
T ss_dssp S-SHHHHHHHHHH-HHHH------T----TGGGSTSGSSS-
T ss_pred hcccHHHHHHHHH-HHhcCCCCCCh----hhhhhcCCccch
Confidence 568889999 65 45689999965 377777888887
No 6
>PF07960 CBP4: CBP4; InterPro: IPR012420 The CBP4 gene in Saccharomyces cerevisiae is essential for the expression and activity of ubiquinol-cytochrome c reductase [, ]. This family appears to be fungal specific.
Probab=34.05 E-value=20 Score=26.81 Aligned_cols=16 Identities=31% Similarity=0.443 Sum_probs=11.8
Q ss_pred cCChHHHHH-H---HHHHHc
Q 031672 15 ASTDENLFG-S---LERMIR 30 (155)
Q Consensus 15 ~PtDeELv~-Y---L~~ki~ 30 (155)
.||||||+. | |+++..
T Consensus 30 tPTeEeL~~r~sPELrkr~~ 49 (128)
T PF07960_consen 30 TPTEEELFKRYSPELRKRYL 49 (128)
T ss_pred CCCHHHHHHhcCHHHHHHHH
Confidence 799999998 5 454443
No 7
>PF13822 ACC_epsilon: Acyl-CoA carboxylase epsilon subunit
Probab=33.06 E-value=22 Score=22.92 Aligned_cols=9 Identities=44% Similarity=0.519 Sum_probs=8.1
Q ss_pred cCChHHHHH
Q 031672 15 ASTDENLFG 23 (155)
Q Consensus 15 ~PtDeELv~ 23 (155)
+||||||..
T Consensus 10 nPt~eElAA 18 (62)
T PF13822_consen 10 NPTDEELAA 18 (62)
T ss_pred CCCHHHHHH
Confidence 899999976
No 8
>PF07131 DUF1382: Protein of unknown function (DUF1382); InterPro: IPR009814 This entry is represented by Bacteriophage lambda, Xis. This entry overlaps with IPR009750, both representing lambda Xis. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several hypothetical Escherichia coli and Bacteriophage lambda-like proteins of around 60 residues in length. The function of this family is unknown.
Probab=30.66 E-value=56 Score=21.30 Aligned_cols=20 Identities=30% Similarity=0.571 Sum_probs=14.4
Q ss_pred CCeeEcC----ChHHHHH---HHHHHH
Q 031672 10 IDVDFAS----TDENLFG---SLERMI 29 (155)
Q Consensus 10 ~G~RF~P----tDeELv~---YL~~ki 29 (155)
.|+||.| ||+|... -|.+|+
T Consensus 22 ~GIRFVpiPv~~dee~~~L~s~~~~kL 48 (61)
T PF07131_consen 22 IGIRFVPIPVVTDEEFHTLSSQLSQKL 48 (61)
T ss_pred cCceeeccccccHHHHHHHHHHHHHHH
Confidence 5999998 6777655 566665
No 9
>PF05865 Cypo_polyhedrin: Cypovirus polyhedrin protein; InterPro: IPR008464 This family consists of several Cypovirus polyhedrin proteins. Polyhedrin is known to form a crystalline matrix (polyhedra) in infected insect cells [].; PDB: 2OH7_A 2OH5_A 2OH6_A.
Probab=30.42 E-value=65 Score=25.47 Aligned_cols=27 Identities=26% Similarity=0.557 Sum_probs=18.9
Q ss_pred CeEEecCcc-eeEeeCCeEEEEEEEEee
Q 031672 71 GQWRAKGET-CEIFSNSYIIGWRTTLEF 97 (155)
Q Consensus 71 G~Wk~~g~~-~~I~~~g~~iG~k~~l~f 97 (155)
--|.++|-. +.|..+|+++|+...|..
T Consensus 141 hpweatgikyrki~~dgeivgyshyfel 168 (248)
T PF05865_consen 141 HPWEATGIKYRKIHRDGEIVGYSHYFEL 168 (248)
T ss_dssp -S-B--GGG-EEEEETTEEEEEEEEEE-
T ss_pred CCccccCceEEEeeccceEeeeeeeeec
Confidence 459999866 778889999999998875
No 10
>PRK02079 pyrroloquinoline quinone biosynthesis protein PqqD; Provisional
Probab=24.17 E-value=45 Score=23.07 Aligned_cols=15 Identities=7% Similarity=-0.082 Sum_probs=11.3
Q ss_pred CCCCCCCCCCCeeEc
Q 031672 1 MCPPTASTPIDVDFA 15 (155)
Q Consensus 1 m~~~~~~lp~G~RF~ 15 (155)
|.+....||+|+||+
T Consensus 1 ~~~~~p~l~~~~rl~ 15 (88)
T PRK02079 1 DRNQVPTLRPGYRFQ 15 (88)
T ss_pred CCCCCcccCCCcccc
Confidence 445667899999986
No 11
>COG3060 MetJ Transcriptional regulator of met regulon [Transcription / Amino acid transport and metabolism]
Probab=23.79 E-value=59 Score=22.83 Aligned_cols=35 Identities=23% Similarity=0.526 Sum_probs=25.2
Q ss_pred cCChHHHHH-HHHHHHcCCCCCCCceeecCCCCCCCCCCC
Q 031672 15 ASTDENLFG-SLERMIRGSPLPCNVINDVNPYNHRPSNLP 53 (155)
Q Consensus 15 ~PtDeELv~-YL~~ki~g~plp~~~I~~~Dvy~~~Pw~L~ 53 (155)
+-|..||+. -...-..|+|||.+ .|+-..-|.++|
T Consensus 51 hatnsellceaflhaftgqplptd----~dl~ker~deip 86 (105)
T COG3060 51 HATNSELLCEAFLHAFTGQPLPTD----ADLRKERSDEIP 86 (105)
T ss_pred hhhhHHHHHHHHHHHHcCCCCCCc----HHHHHhccccch
Confidence 457889998 44455789999854 477777777776
No 12
>PF01473 CW_binding_1: Putative cell wall binding repeat; InterPro: IPR018337 The cell wall-binding repeat (CW) is an about 20 amino acid residue module, essentially found in two bacterial Gram-positive protein families; the choline binding proteins and glucosyltransferases (2.4.1.5 from EC). In choline-binding proteins cell wall binding repeats bind to choline moieties of both teichoic and lipoteichoic acids, two components peculiar to the cell surface of Gram-positive bacteria [, ]. In glucosyltransferases the region spanning the CW repeats is a glucan binding domain []. Several crystal structures of CW have been solved [, ]. In the choline binding protein LytA, the repeats adopt a solenoid fold consisting exclusively of beta-hairpins that stack to form a left-handed superhelix with a boomerang-like shape. The choline groups bind between beta-hairpin 'steps' of the superhelix []. In Cpl-1 CW repeats assemble in two sub-domains: an N-terminal superhelical moiety similar to the LytA one and a C-terminal beta-sheet involved in interactions with the lysozyme domain. Choline is bound between repeats 1 and 2, and, 2 and 3 of the superhelical sub-domain []. Some proteins known to contain cell-wall binding repeats include: Pneumococcal N-acetylmuramoyl-L-alanine amidase (autolysin, lytA) (3.5.1.28 from EC). It is a surface-exposed enzyme that rules the self-destruction of pneumococcal cells through degradation of their peptidoglycan backbone. It mediates the release of toxic substances that damage the host tissues. Pneumococcal endo-beta-N-acetylglucosaminidase (lytB) (3.2.1.96 from EC). It plays an important role in cell wall degradation and cell separation. Pneumococcal teichoic acid phosphorylcholine esterase (pce or cbpE), a cell wall hydrolase important for cellular adhesion and colonisation. Lactobacillales glucosyltransferase. It catalyses the transfer of glucosyl units from the cleavage of sucrose to a growing chain of glucan. Clostridium difficile toxin A (tcdA) and toxin B (tcdb). They are the causative agents of the antibiotic-associated pseudomembranous colitis. They are intracellular acting toxins that reach their targets after receptor-mediated endocytosis. Clostridium acetobutylicum cspA protein. Siphoviridae bacteriophages N-acetylmuramoyl-L-alanine amidase. It lyses the bacterial host cell wall. Podoviridae lysozyme protein (cpl-1). It is capable of digesting the pneumococcal cell wall. The cell wall binding repeats are also known as the choline-binding repeats (ChBr) or the choline-binding domain (ChBD). ; PDB: 1GVM_C 2BML_B 1HCX_A 1OBA_A 1H09_A 2J8F_A 2IXU_A 2J8G_A 2IXV_A 2X8O_A ....
Probab=23.47 E-value=52 Score=15.83 Aligned_cols=8 Identities=38% Similarity=1.061 Sum_probs=5.9
Q ss_pred CCceEEEE
Q 031672 54 DGVWYLVC 61 (155)
Q Consensus 54 ~~~wyFF~ 61 (155)
++.||||.
T Consensus 7 ~~~wYy~~ 14 (19)
T PF01473_consen 7 NGNWYYFD 14 (19)
T ss_dssp TTEEEEET
T ss_pred CCEEEEeC
Confidence 56788883
No 13
>COG4741 Predicted secreted endonuclease distantly related to archaeal Holliday junction resolvase [Nucleotide transport and metabolism]
Probab=22.50 E-value=32 Score=26.76 Aligned_cols=15 Identities=13% Similarity=0.140 Sum_probs=11.9
Q ss_pred CCCCCCCeeEcCChH
Q 031672 5 TASTPIDVDFASTDE 19 (155)
Q Consensus 5 ~~~lp~G~RF~PtDe 19 (155)
..++-|+|+|||.|.
T Consensus 95 laPffp~f~ynPkD~ 109 (175)
T COG4741 95 LAPFFPEFKYNPKDA 109 (175)
T ss_pred hcccccCCCcCCccc
Confidence 456677999999985
No 14
>COG0020 UppS Undecaprenyl pyrophosphate synthase [Lipid metabolism]
Probab=22.45 E-value=48 Score=27.33 Aligned_cols=41 Identities=24% Similarity=0.228 Sum_probs=30.7
Q ss_pred hHHHHH-HHHHHHcCCCCCCCcee---ecCCCCCCCCCCCCCceEEE
Q 031672 18 DENLFG-SLERMIRGSPLPCNVIN---DVNPYNHRPSNLPDGVWYLV 60 (155)
Q Consensus 18 DeELv~-YL~~ki~g~plp~~~I~---~~Dvy~~~Pw~L~~~~wyFF 60 (155)
|||++. ||.. .+.|-|+-+|. +..+.++=||++.-.|.||-
T Consensus 172 ~e~~i~~~L~~--~~~pdpDLlIRTsGe~RlSnFllWQ~aYsElyF~ 216 (245)
T COG0020 172 DEELISSHLYT--SGLPDPDLLIRTSGEQRLSNFLLWQSAYSELYFT 216 (245)
T ss_pred CHHHHHHhhcc--cCCCCCCEEEeCCCcccccccHHHHHHhCeEEec
Confidence 688999 9988 66665555553 45888999999996677664
No 15
>smart00707 RPEL Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2.
Probab=20.63 E-value=69 Score=17.35 Aligned_cols=13 Identities=23% Similarity=0.156 Sum_probs=10.8
Q ss_pred CeeEcCChHHHHH
Q 031672 11 DVDFASTDENLFG 23 (155)
Q Consensus 11 G~RF~PtDeELv~ 23 (155)
.....|+-+|||.
T Consensus 6 kl~~RP~~eeLv~ 18 (26)
T smart00707 6 KLSQRPTREELEE 18 (26)
T ss_pred HHHcCCCHHHHHH
Confidence 4567899999997
No 16
>PF08990 Docking: Erythronolide synthase docking; InterPro: IPR015083 The N-terminal docking domain found in modular polyketide synthase assumes an alpha-helical structure, wherein two alpha-helices are connected by a short loop. Two such N-terminal domains dimerise to form amphipathic parallel alpha-helical coiled coils: dimerisation is essential for protein function []. ; GO: 0016740 transferase activity, 0048037 cofactor binding; PDB: 2HG4_E.
Probab=20.41 E-value=56 Score=17.81 Aligned_cols=14 Identities=21% Similarity=0.423 Sum_probs=8.5
Q ss_pred CChHHHHHHHHHHH
Q 031672 16 STDENLFGSLERMI 29 (155)
Q Consensus 16 PtDeELv~YL~~ki 29 (155)
++++.|..||++-.
T Consensus 2 ~~e~kLr~YLkr~t 15 (27)
T PF08990_consen 2 ANEDKLRDYLKRVT 15 (27)
T ss_dssp --HCHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHH
Confidence 35667777998643
Done!