Query 031674
Match_columns 155
No_of_seqs 137 out of 1369
Neff 7.6
Searched_HMMs 46136
Date Fri Mar 29 03:49:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031674.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/031674hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1282 Serine carboxypeptidas 100.0 9.4E-40 2E-44 276.1 12.2 143 1-143 142-288 (454)
2 PLN02213 sinapoylglucose-malat 100.0 5.5E-39 1.2E-43 262.5 12.7 141 2-142 26-166 (319)
3 PLN03016 sinapoylglucose-malat 100.0 3.4E-36 7.5E-41 254.6 13.1 141 2-142 140-280 (433)
4 PF00450 Peptidase_S10: Serine 100.0 1.5E-35 3.3E-40 246.7 10.2 139 1-140 110-254 (415)
5 PLN02209 serine carboxypeptida 100.0 1.8E-34 3.9E-39 244.4 13.3 142 2-143 142-283 (437)
6 PTZ00472 serine carboxypeptida 100.0 4.3E-32 9.3E-37 231.5 10.5 152 2-154 146-320 (462)
7 KOG1283 Serine carboxypeptidas 99.9 3.9E-24 8.4E-29 172.5 5.2 143 1-144 96-243 (414)
8 COG2939 Carboxypeptidase C (ca 99.9 2.4E-21 5.2E-26 164.1 10.8 136 3-139 172-330 (498)
9 PF07859 Abhydrolase_3: alpha/ 93.8 0.13 2.9E-06 38.6 4.9 62 7-74 49-112 (211)
10 TIGR03611 RutD pyrimidine util 93.7 0.1 2.3E-06 39.3 4.2 40 25-74 78-117 (257)
11 PF00326 Peptidase_S9: Prolyl 93.7 0.19 4E-06 38.1 5.6 63 6-79 44-106 (213)
12 PF12697 Abhydrolase_6: Alpha/ 93.7 0.26 5.6E-06 35.9 6.1 54 9-75 51-104 (228)
13 TIGR01607 PST-A Plasmodium sub 93.6 0.19 4.2E-06 41.2 5.9 68 4-73 102-186 (332)
14 PF01764 Lipase_3: Lipase (cla 93.4 0.26 5.7E-06 34.6 5.7 63 6-74 46-108 (140)
15 PLN02454 triacylglycerol lipas 93.1 0.32 6.9E-06 41.6 6.4 68 5-75 207-274 (414)
16 PHA02857 monoglyceride lipase; 92.9 0.29 6.2E-06 38.2 5.7 55 7-74 80-134 (276)
17 PF11144 DUF2920: Protein of u 92.8 0.31 6.8E-06 41.5 5.9 62 5-76 161-223 (403)
18 TIGR01250 pro_imino_pep_2 prol 92.5 0.82 1.8E-05 34.8 7.7 39 25-73 94-132 (288)
19 PLN02385 hydrolase; alpha/beta 92.3 0.32 6.9E-06 39.8 5.4 57 5-72 141-197 (349)
20 KOG1515 Arylacetamide deacetyl 91.9 0.58 1.3E-05 39.0 6.5 58 12-75 152-210 (336)
21 TIGR03695 menH_SHCHC 2-succiny 91.7 0.34 7.3E-06 35.8 4.5 38 25-72 68-105 (251)
22 TIGR03056 bchO_mg_che_rel puta 91.6 0.4 8.6E-06 36.9 5.0 39 26-74 94-132 (278)
23 PLN02298 hydrolase, alpha/beta 91.4 0.64 1.4E-05 37.5 6.2 59 4-73 112-170 (330)
24 cd00519 Lipase_3 Lipase (class 91.3 0.62 1.3E-05 35.9 5.8 58 9-74 113-170 (229)
25 cd00741 Lipase Lipase. Lipase 91.3 0.46 1E-05 34.2 4.8 58 8-73 12-69 (153)
26 PF00975 Thioesterase: Thioest 90.9 0.37 8.1E-06 36.5 4.1 38 28-72 67-104 (229)
27 cd00707 Pancreat_lipase_like P 90.8 0.5 1.1E-05 37.9 4.9 56 5-71 91-146 (275)
28 PRK05077 frsA fermentation/res 90.1 0.75 1.6E-05 39.1 5.6 52 12-73 250-301 (414)
29 PRK10749 lysophospholipase L2; 89.9 0.65 1.4E-05 37.8 4.9 56 5-73 112-167 (330)
30 PLN02571 triacylglycerol lipas 89.5 1.3 2.8E-05 37.9 6.6 70 5-75 205-278 (413)
31 PLN02211 methyl indole-3-aceta 89.4 0.84 1.8E-05 36.2 5.1 36 9-46 71-106 (273)
32 PF05728 UPF0227: Uncharacteri 89.2 1.2 2.7E-05 33.9 5.7 41 26-79 58-98 (187)
33 PLN02652 hydrolase; alpha/beta 88.7 1.2 2.6E-05 37.7 5.8 59 5-74 189-247 (395)
34 PRK10162 acetyl esterase; Prov 88.6 1.1 2.3E-05 36.5 5.3 45 26-74 153-197 (318)
35 PF05577 Peptidase_S28: Serine 88.2 0.85 1.9E-05 38.7 4.7 71 2-82 88-158 (434)
36 TIGR02427 protocat_pcaD 3-oxoa 88.1 0.97 2.1E-05 33.4 4.5 37 4-47 63-99 (251)
37 COG1506 DAP2 Dipeptidyl aminop 87.8 0.39 8.4E-06 42.9 2.4 60 6-77 453-512 (620)
38 PRK11126 2-succinyl-6-hydroxy- 87.8 1.1 2.3E-05 34.0 4.6 38 25-71 64-101 (242)
39 PLN02753 triacylglycerol lipas 87.4 2.1 4.5E-05 37.8 6.6 72 4-75 287-362 (531)
40 TIGR03100 hydr1_PEP hydrolase, 87.4 3.3 7.2E-05 32.8 7.3 57 5-74 80-136 (274)
41 PLN02719 triacylglycerol lipas 86.9 2.1 4.6E-05 37.6 6.3 71 5-75 274-348 (518)
42 TIGR00976 /NonD putative hydro 86.7 1.1 2.3E-05 39.4 4.5 59 5-75 77-135 (550)
43 PLN00021 chlorophyllase 86.3 1.8 3.8E-05 35.6 5.3 43 6-48 101-147 (313)
44 PLN02965 Probable pheophorbida 85.7 1.9 4.1E-05 33.4 5.1 51 9-71 56-106 (255)
45 PLN02578 hydrolase 85.6 1.2 2.7E-05 36.6 4.2 48 6-70 138-185 (354)
46 PF00561 Abhydrolase_1: alpha/ 85.1 1.2 2.6E-05 32.9 3.6 54 5-71 25-78 (230)
47 PF10340 DUF2424: Protein of u 85.1 2.5 5.3E-05 35.8 5.7 45 26-75 194-238 (374)
48 PLN02894 hydrolase, alpha/beta 85.0 2 4.4E-05 36.2 5.2 53 7-72 159-211 (402)
49 PF05990 DUF900: Alpha/beta hy 84.9 2.9 6.4E-05 32.7 5.8 73 3-76 68-141 (233)
50 PRK03204 haloalkane dehalogena 84.9 1.9 4.2E-05 34.2 4.9 52 8-72 85-136 (286)
51 PRK03592 haloalkane dehalogena 84.4 2.1 4.5E-05 33.8 4.8 40 25-74 91-130 (295)
52 PRK10566 esterase; Provisional 84.4 2.1 4.5E-05 32.8 4.7 39 8-47 89-127 (249)
53 KOG1455 Lysophospholipase [Lip 84.4 2 4.3E-05 35.4 4.7 42 4-46 107-148 (313)
54 PLN02442 S-formylglutathione h 83.7 2.7 5.8E-05 33.6 5.2 43 23-75 139-181 (283)
55 TIGR02240 PHA_depoly_arom poly 83.7 1.6 3.4E-05 34.2 3.8 52 9-73 76-127 (276)
56 TIGR03230 lipo_lipase lipoprot 83.6 2.6 5.5E-05 36.5 5.3 43 4-47 97-139 (442)
57 PF11288 DUF3089: Protein of u 83.2 2.4 5.1E-05 33.0 4.5 42 7-50 77-118 (207)
58 PLN02824 hydrolase, alpha/beta 82.6 2.6 5.7E-05 33.2 4.7 51 9-72 87-137 (294)
59 PRK10673 acyl-CoA esterase; Pr 82.2 2.2 4.7E-05 32.5 4.0 49 4-69 65-113 (255)
60 PRK00870 haloalkane dehalogena 82.1 1.9 4.2E-05 34.2 3.8 51 8-71 99-149 (302)
61 COG2267 PldB Lysophospholipase 81.2 3.4 7.3E-05 33.6 5.0 55 11-75 90-145 (298)
62 PLN02324 triacylglycerol lipas 80.6 5.9 0.00013 34.0 6.3 70 5-75 194-268 (415)
63 COG0657 Aes Esterase/lipase [L 80.3 5 0.00011 32.2 5.6 63 8-76 131-195 (312)
64 TIGR02821 fghA_ester_D S-formy 79.9 5.4 0.00012 31.6 5.7 52 13-75 124-176 (275)
65 PRK14567 triosephosphate isome 79.7 6.9 0.00015 31.4 6.1 61 4-75 178-238 (253)
66 PF06500 DUF1100: Alpha/beta h 79.7 1.9 4.1E-05 36.9 3.1 56 8-73 242-297 (411)
67 PLN02408 phospholipase A1 79.6 5.8 0.00013 33.5 5.9 65 5-74 179-243 (365)
68 PF06057 VirJ: Bacterial virul 79.3 3.8 8.1E-05 31.6 4.3 60 4-72 48-107 (192)
69 TIGR01249 pro_imino_pep_1 prol 78.9 2.7 5.8E-05 33.7 3.6 52 9-73 80-131 (306)
70 PRK14566 triosephosphate isome 78.8 6.7 0.00014 31.6 5.8 61 4-75 188-248 (260)
71 PLN02761 lipase class 3 family 78.6 6.8 0.00015 34.6 6.2 71 5-75 269-345 (527)
72 PRK04940 hypothetical protein; 78.2 8.5 0.00018 29.3 6.0 40 27-79 60-99 (180)
73 PLN02310 triacylglycerol lipas 77.0 6.8 0.00015 33.6 5.6 65 5-74 186-251 (405)
74 PRK11071 esterase YqiA; Provis 76.8 3.7 8E-05 30.9 3.7 51 9-75 46-96 (190)
75 PLN00413 triacylglycerol lipas 76.6 3.4 7.3E-05 36.1 3.7 39 9-50 269-307 (479)
76 TIGR03343 biphenyl_bphD 2-hydr 76.5 3.7 7.9E-05 31.8 3.7 33 12-47 89-121 (282)
77 PLN02802 triacylglycerol lipas 76.4 7.1 0.00015 34.4 5.7 65 5-74 309-373 (509)
78 KOG4569 Predicted lipase [Lipi 75.6 6.8 0.00015 32.5 5.3 61 9-75 156-216 (336)
79 PRK14875 acetoin dehydrogenase 74.6 5.1 0.00011 32.4 4.2 35 10-47 183-217 (371)
80 TIGR03101 hydr2_PEP hydrolase, 74.4 10 0.00022 30.4 5.8 60 7-80 83-142 (266)
81 PLN02511 hydrolase 74.0 11 0.00024 31.5 6.3 36 7-45 156-191 (388)
82 KOG1454 Predicted hydrolase/ac 72.4 4.8 0.0001 33.2 3.6 39 7-48 111-149 (326)
83 TIGR01840 esterase_phb esteras 72.3 5.4 0.00012 30.1 3.6 37 9-46 78-114 (212)
84 PF03583 LIP: Secretory lipase 72.0 19 0.00041 29.1 6.9 66 5-75 46-116 (290)
85 PF00681 Plectin: Plectin repe 72.0 1.5 3.2E-05 25.5 0.4 32 70-101 12-43 (45)
86 PLN02733 phosphatidylcholine-s 72.0 8.3 0.00018 33.3 5.0 38 6-46 144-181 (440)
87 TIGR01738 bioH putative pimelo 71.8 3.2 7E-05 30.5 2.3 21 27-47 65-85 (245)
88 PLN02934 triacylglycerol lipas 71.8 13 0.00029 32.8 6.2 62 9-74 306-367 (515)
89 PF06259 Abhydrolase_8: Alpha/ 71.5 9.5 0.00021 28.9 4.7 41 5-47 89-129 (177)
90 PLN02162 triacylglycerol lipas 70.4 7 0.00015 34.1 4.2 61 9-74 263-324 (475)
91 PF00151 Lipase: Lipase; Inte 69.9 4.5 9.8E-05 33.5 2.9 46 4-50 128-173 (331)
92 PF11187 DUF2974: Protein of u 69.7 11 0.00025 29.4 5.0 40 7-50 68-107 (224)
93 PLN02847 triacylglycerol lipas 69.5 12 0.00025 33.9 5.4 50 12-69 239-288 (633)
94 KOG1838 Alpha/beta hydrolase [ 68.6 15 0.00033 31.5 5.8 55 8-72 182-236 (409)
95 PF08237 PE-PPE: PE-PPE domain 68.3 15 0.00033 28.7 5.5 60 4-71 30-89 (225)
96 PF12695 Abhydrolase_5: Alpha/ 67.9 6.6 0.00014 26.9 3.1 37 25-72 59-95 (145)
97 PLN03037 lipase class 3 family 67.8 15 0.00033 32.5 5.8 66 6-75 296-362 (525)
98 PRK08775 homoserine O-acetyltr 67.6 9.2 0.0002 31.1 4.3 52 5-72 122-173 (343)
99 PF12740 Chlorophyllase2: Chlo 67.1 14 0.0003 29.8 5.0 63 3-72 63-131 (259)
100 PRK10349 carboxylesterase BioH 67.0 6.7 0.00015 30.0 3.2 35 26-70 73-107 (256)
101 PLN02679 hydrolase, alpha/beta 66.4 9.6 0.00021 31.4 4.2 37 26-71 154-190 (360)
102 PF10230 DUF2305: Uncharacteri 66.3 16 0.00035 29.1 5.3 63 4-74 62-124 (266)
103 PRK10985 putative hydrolase; P 65.8 28 0.0006 28.1 6.7 35 8-45 115-149 (324)
104 PF10081 Abhydrolase_9: Alpha/ 63.9 13 0.00028 30.4 4.3 36 4-39 86-121 (289)
105 PLN02429 triosephosphate isome 63.4 24 0.00051 29.3 5.8 61 4-75 238-299 (315)
106 PF04414 tRNA_deacylase: D-ami 63.3 18 0.00039 28.3 4.9 48 1-51 104-152 (213)
107 KOG2564 Predicted acetyltransf 63.1 12 0.00026 30.9 4.0 54 4-70 127-180 (343)
108 PF08840 BAAT_C: BAAT / Acyl-C 63.0 6.5 0.00014 30.2 2.4 35 15-49 10-44 (213)
109 PLN02561 triosephosphate isome 62.9 22 0.00048 28.5 5.5 60 4-74 179-239 (253)
110 PF05057 DUF676: Putative seri 62.4 15 0.00032 28.2 4.3 47 5-52 57-103 (217)
111 COG0429 Predicted hydrolase of 60.4 24 0.00053 29.5 5.4 54 8-71 132-185 (345)
112 PTZ00333 triosephosphate isome 59.7 26 0.00056 28.0 5.4 60 4-74 182-242 (255)
113 PF02230 Abhydrolase_2: Phosph 58.9 12 0.00026 28.3 3.3 75 6-90 82-164 (216)
114 TIGR01392 homoserO_Ac_trn homo 58.4 14 0.0003 30.2 3.7 52 8-72 110-162 (351)
115 PF03403 PAF-AH_p_II: Platelet 58.1 7.7 0.00017 32.7 2.2 37 28-75 229-265 (379)
116 COG3208 GrsT Predicted thioest 57.8 8.1 0.00018 30.8 2.1 29 23-51 70-98 (244)
117 PF02129 Peptidase_S15: X-Pro 57.7 11 0.00023 29.7 2.9 59 6-76 82-140 (272)
118 PF02450 LCAT: Lecithin:choles 56.9 32 0.00069 29.0 5.7 63 9-74 101-163 (389)
119 TIGR01836 PHA_synth_III_C poly 56.5 24 0.00051 28.8 4.8 52 10-74 122-173 (350)
120 PRK14565 triosephosphate isome 56.1 34 0.00074 27.1 5.4 54 4-76 173-226 (237)
121 PRK15492 triosephosphate isome 55.5 44 0.00095 26.9 6.0 61 4-76 188-249 (260)
122 PRK05371 x-prolyl-dipeptidyl a 55.1 22 0.00048 32.9 4.8 41 24-74 335-375 (767)
123 cd00311 TIM Triosephosphate is 54.9 49 0.0011 26.2 6.2 60 4-75 175-235 (242)
124 smart00824 PKS_TE Thioesterase 54.9 52 0.0011 23.5 6.0 26 26-51 63-88 (212)
125 KOG4409 Predicted hydrolase/ac 53.8 17 0.00038 30.6 3.6 56 7-75 143-198 (365)
126 PRK00042 tpiA triosephosphate 53.2 54 0.0012 26.1 6.2 60 4-75 179-239 (250)
127 PF10503 Esterase_phd: Esteras 52.8 14 0.00031 28.8 2.8 38 10-47 80-117 (220)
128 PF07519 Tannase: Tannase and 52.7 87 0.0019 27.3 7.8 79 12-104 104-191 (474)
129 PRK03995 hypothetical protein; 52.6 29 0.00062 28.1 4.5 47 2-51 157-203 (267)
130 PRK00175 metX homoserine O-ace 52.5 20 0.00043 29.8 3.8 53 7-72 129-182 (379)
131 PF07389 DUF1500: Protein of u 51.8 13 0.00028 25.1 2.0 30 6-37 5-34 (100)
132 cd00312 Esterase_lipase Estera 51.6 18 0.0004 30.9 3.5 36 9-45 159-194 (493)
133 KOG2183 Prolylcarboxypeptidase 51.3 24 0.00052 30.7 4.0 38 4-42 145-182 (492)
134 COG4757 Predicted alpha/beta h 51.1 9.4 0.0002 30.7 1.5 22 25-46 103-124 (281)
135 cd03871 M14_CPB Peptidase M14 50.5 13 0.00029 30.3 2.4 35 8-44 10-44 (300)
136 PF07819 PGAP1: PGAP1-like pro 50.4 28 0.00062 27.0 4.2 63 7-76 63-128 (225)
137 PF10929 DUF2811: Protein of u 50.1 13 0.00027 23.0 1.6 23 4-26 4-26 (57)
138 PLN03084 alpha/beta hydrolase 50.0 22 0.00048 30.0 3.7 53 8-73 181-233 (383)
139 PF14542 Acetyltransf_CG: GCN5 49.7 13 0.00027 24.1 1.7 15 12-26 63-77 (78)
140 PRK11460 putative hydrolase; P 48.9 32 0.00069 26.5 4.2 24 23-46 99-122 (232)
141 COG0412 Dienelactone hydrolase 48.7 42 0.00092 26.2 4.9 44 4-48 90-133 (236)
142 KOG3724 Negative regulator of 48.2 21 0.00046 33.4 3.4 36 5-40 154-195 (973)
143 PRK05855 short chain dehydroge 48.1 24 0.00052 30.3 3.7 32 4-41 77-108 (582)
144 COG4425 Predicted membrane pro 47.7 31 0.00067 30.4 4.2 36 4-39 374-409 (588)
145 PF00121 TIM: Triosephosphate 47.5 13 0.00028 29.5 1.8 62 4-76 177-239 (244)
146 PF11104 PilM_2: Type IV pilus 44.2 46 0.001 27.3 4.7 45 5-52 254-298 (340)
147 KOG2382 Predicted alpha/beta h 44.1 32 0.00069 28.5 3.6 32 4-38 103-134 (315)
148 KOG4627 Kynurenine formamidase 44.0 37 0.00081 26.9 3.8 76 4-92 115-190 (270)
149 COG3571 Predicted hydrolase of 43.3 17 0.00037 27.7 1.8 27 24-50 86-112 (213)
150 PF08060 NOSIC: NOSIC (NUC001) 43.1 25 0.00054 21.0 2.2 20 7-26 16-36 (53)
151 PRK13962 bifunctional phosphog 42.5 62 0.0013 29.5 5.5 62 4-76 574-636 (645)
152 PRK10115 protease 2; Provision 42.3 37 0.0008 31.0 4.1 60 7-77 505-564 (686)
153 PLN03087 BODYGUARD 1 domain co 41.9 39 0.00085 29.6 4.1 36 25-70 272-307 (481)
154 PF06821 Ser_hydrolase: Serine 40.6 45 0.00099 24.7 3.8 45 19-73 48-92 (171)
155 COG3319 Thioesterase domains o 40.5 27 0.00058 28.0 2.6 25 28-52 66-90 (257)
156 COG0596 MhpC Predicted hydrola 40.4 46 0.001 23.8 3.8 49 11-72 75-123 (282)
157 KOG2182 Hydrolytic enzymes of 39.9 51 0.0011 29.1 4.4 40 3-42 148-187 (514)
158 PF00756 Esterase: Putative es 39.4 21 0.00045 27.3 1.8 44 21-75 110-153 (251)
159 PLN02980 2-oxoglutarate decarb 39.4 44 0.00096 33.7 4.4 37 24-70 1442-1478(1655)
160 KOG4391 Predicted alpha/beta h 38.2 29 0.00062 27.8 2.4 51 14-74 136-186 (300)
161 PRK13604 luxD acyl transferase 37.9 57 0.0012 26.9 4.2 37 27-75 108-144 (307)
162 smart00631 Zn_pept Zn_pept. 35.9 29 0.00063 27.7 2.2 36 7-44 4-39 (277)
163 TIGR01838 PHA_synth_I poly(R)- 35.7 1.7E+02 0.0038 25.9 7.2 59 8-75 246-305 (532)
164 PRK14905 triosephosphate isome 35.3 1.3E+02 0.0029 25.2 6.1 61 4-76 189-250 (355)
165 PF01738 DLH: Dienelactone hyd 34.8 31 0.00068 25.9 2.2 33 13-45 84-116 (218)
166 PF11943 DUF3460: Protein of u 34.4 39 0.00084 21.1 2.1 18 8-25 5-22 (60)
167 PF06028 DUF915: Alpha/beta hy 34.3 1.3E+02 0.0029 23.9 5.7 58 7-72 86-144 (255)
168 PRK07581 hypothetical protein; 33.7 53 0.0011 26.4 3.4 23 25-47 121-144 (339)
169 KOG1553 Predicted alpha/beta h 33.7 98 0.0021 26.6 5.0 57 2-73 290-346 (517)
170 PF09094 DUF1925: Domain of un 32.8 30 0.00066 22.8 1.5 26 25-51 47-72 (80)
171 COG2819 Predicted hydrolase of 30.8 74 0.0016 25.7 3.7 35 7-42 113-152 (264)
172 PRK10252 entF enterobactin syn 30.8 1.2E+02 0.0026 29.2 5.8 25 27-51 1133-1157(1296)
173 PLN02872 triacylglycerol lipas 30.4 75 0.0016 26.9 3.9 33 5-41 141-174 (395)
174 TIGR01175 pilM type IV pilus a 29.7 1.2E+02 0.0026 24.6 5.0 41 8-51 265-305 (348)
175 cd03859 M14_CPT Peptidase M14- 29.4 46 0.00099 27.0 2.4 34 8-43 8-41 (295)
176 COG1075 LipA Predicted acetylt 29.3 86 0.0019 25.8 4.0 43 5-50 108-150 (336)
177 PRK06489 hypothetical protein; 29.2 70 0.0015 26.2 3.5 21 27-47 153-174 (360)
178 COG0400 Predicted esterase [Ge 29.2 1.1E+02 0.0023 23.7 4.3 78 4-92 77-157 (207)
179 COG4188 Predicted dienelactone 28.8 68 0.0015 27.2 3.3 25 21-45 149-177 (365)
180 cd06905 Peptidase_M14-like_8 A 28.8 47 0.001 27.9 2.4 35 7-43 7-41 (360)
181 PF07533 BRK: BRK domain; Int 28.8 36 0.00077 19.9 1.2 12 14-25 30-41 (46)
182 cd06248 M14_CPA_CPB_like Pepti 28.4 46 0.00099 27.2 2.2 35 8-44 8-42 (304)
183 cd03860 M14_CP_A-B_like The Pe 28.2 50 0.0011 26.7 2.4 34 8-43 5-38 (294)
184 cd03863 M14_CPD_II The second 27.6 42 0.00092 28.4 1.9 65 8-76 10-76 (375)
185 cd03858 M14_CP_N-E_like Carbox 27.4 45 0.00098 27.9 2.1 35 8-44 5-39 (374)
186 cd03869 M14_CPX_like Peptidase 27.2 82 0.0018 27.1 3.6 64 8-75 9-74 (405)
187 COG5153 CVT17 Putative lipase 27.1 56 0.0012 27.2 2.4 35 10-44 259-293 (425)
188 KOG4540 Putative lipase essent 27.1 56 0.0012 27.2 2.4 35 10-44 259-293 (425)
189 KOG2369 Lecithin:cholesterol a 26.3 95 0.0021 27.2 3.8 45 4-48 158-203 (473)
190 TIGR03502 lipase_Pla1_cef extr 26.2 1E+02 0.0022 28.9 4.2 26 22-47 550-575 (792)
191 PRK14866 hypothetical protein; 25.6 1.1E+02 0.0025 26.6 4.2 47 1-51 161-207 (451)
192 PF09851 SHOCT: Short C-termin 25.4 78 0.0017 16.6 2.1 20 82-101 8-27 (31)
193 PF05448 AXE1: Acetyl xylan es 24.3 26 0.00057 28.8 0.1 48 16-74 164-211 (320)
194 PRK09505 malS alpha-amylase; R 24.1 1.4E+02 0.003 27.5 4.7 28 11-38 479-508 (683)
195 KOG2650 Zinc carboxypeptidase 23.9 1.2E+02 0.0026 26.2 4.0 30 8-39 125-154 (418)
196 cd03868 M14_CPD_I The first ca 23.9 53 0.0011 27.5 1.8 35 8-44 5-39 (372)
197 cd03870 M14_CPA Peptidase M14 23.8 56 0.0012 26.7 1.9 36 7-44 9-44 (301)
198 KOG2100 Dipeptidyl aminopeptid 23.4 51 0.0011 30.5 1.8 76 7-95 589-665 (755)
199 PRK06765 homoserine O-acetyltr 22.8 95 0.0021 26.2 3.2 38 7-47 143-181 (389)
200 cd06246 M14_CPB2 Peptidase M14 22.7 59 0.0013 26.5 1.9 36 7-44 8-43 (300)
201 PF03283 PAE: Pectinacetyleste 22.0 1.9E+02 0.004 24.3 4.7 58 11-74 141-199 (361)
202 cd03872 M14_CPA6 Carboxypeptid 22.0 79 0.0017 25.9 2.5 35 8-44 6-40 (300)
203 cd03867 M14_CPZ Peptidase M14- 21.9 88 0.0019 26.6 2.8 65 8-76 5-71 (395)
204 cd06245 M14_CPD_III The third 21.9 75 0.0016 26.7 2.4 64 8-75 6-71 (363)
205 cd06247 M14_CPO Peptidase M14 21.7 69 0.0015 26.2 2.1 35 8-44 8-42 (298)
206 PF05705 DUF829: Eukaryotic pr 21.4 3.7E+02 0.008 20.4 6.2 45 27-71 67-111 (240)
207 smart00250 PLEC Plectin repeat 21.4 20 0.00043 19.7 -0.8 25 70-94 12-36 (38)
208 PF03632 Glyco_hydro_65m: Glyc 21.2 42 0.0009 28.4 0.7 22 31-52 25-61 (370)
209 cd06227 Peptidase_M14-like_2 A 20.4 95 0.0021 25.0 2.6 33 7-42 6-38 (272)
210 PF05277 DUF726: Protein of un 20.4 5.2E+02 0.011 21.7 7.9 57 12-73 206-262 (345)
211 KOG4667 Predicted esterase [Li 20.2 1.8E+02 0.004 23.3 4.0 78 6-93 88-165 (269)
No 1
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=100.00 E-value=9.4e-40 Score=276.06 Aligned_cols=143 Identities=36% Similarity=0.645 Sum_probs=131.9
Q ss_pred CChHHHHHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCChhhhhHH
Q 031674 1 MNDTLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDKIDQNS 80 (155)
Q Consensus 1 ~~d~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~~~~~~~ 80 (155)
++|+.+|+|++.||++||++||||++|||||+||||||||||+||++|+++|+....+.|||||++||||++|+..|..+
T Consensus 142 ~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~td~~~~~~~ 221 (454)
T KOG1282|consen 142 TGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYAIGNGLTDPEIDYNG 221 (454)
T ss_pred CCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEEEecCcccCccccccc
Confidence 47999999999999999999999999999999999999999999999999998655678999999999999999999999
Q ss_pred HHHHhhhccccCHHHHHHHHhhccc---ccCCCCCChhhHHHHHHHHH-HhcCCCcccccCCCCCCC
Q 031674 81 KIQFAYLNALITYEIYKSAKKNCKG---DYVNVDPGNYLCKADLQNIS-AVRKGVTIILFICLLFLN 143 (155)
Q Consensus 81 ~~~~~~~~gli~~~~~~~~~~~C~~---~~~~~~~~~~~C~~~~~~~~-~~~~~in~Ydi~~~~c~~ 143 (155)
+.+|++.||||++++++.+++.|.. ++.++.+.+..|..+++.+. ...++++.|+|+.+.|..
T Consensus 222 ~~~~a~~h~liSde~~~~l~~~C~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~i~~y~i~~~~C~~ 288 (454)
T KOG1282|consen 222 RIPFAWGHGLISDELYESLKRACDFSSDNYANVDPSNTKCNKAVEEFDSKTTGDIDNYYILTPDCYP 288 (454)
T ss_pred hhhhhhhcccCCHHHHHHHHHHhccCcccccccCCchhHHHHHHHHHHHHHhccCchhhhcchhhcc
Confidence 9999999999999999999999987 34444566789999999998 666899999999998985
No 2
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=100.00 E-value=5.5e-39 Score=262.47 Aligned_cols=141 Identities=42% Similarity=0.685 Sum_probs=126.1
Q ss_pred ChHHHHHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCChhhhhHHH
Q 031674 2 NDTLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDKIDQNSK 81 (155)
Q Consensus 2 ~d~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~~~~~~~~ 81 (155)
+|+++|+|++.||+.||++||+|+++||||+||||||||||++|++|+++|+.+..++||||||+||||||+|..|..++
T Consensus 26 ~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~~~inLkGi~IGNg~t~~~~~~~~~ 105 (319)
T PLN02213 26 GDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMDFEQNFR 105 (319)
T ss_pred ccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccCCceeeeEEEeCCCCCCccccchhH
Confidence 46677899999999999999999999999999999999999999999998876556789999999999999999999999
Q ss_pred HHHhhhccccCHHHHHHHHhhcccccCCCCCChhhHHHHHHHHHHhcCCCcccccCCCCCC
Q 031674 82 IQFAYLNALITYEIYKSAKKNCKGDYVNVDPGNYLCKADLQNISAVRKGVTIILFICLLFL 142 (155)
Q Consensus 82 ~~~~~~~gli~~~~~~~~~~~C~~~~~~~~~~~~~C~~~~~~~~~~~~~in~Ydi~~~~c~ 142 (155)
.+|+|.+|||++++++.+++.|......+.++...|..++..+....+++|+||++.+.|.
T Consensus 106 ~~~~~~~gli~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (319)
T PLN02213 106 IPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQCLKLTEEYHKCTAKINIHHILTPDCD 166 (319)
T ss_pred hhHHHhcCCCCHHHHHHHHHhcCCCccCCCCCcHHHHHHHHHHHHHHhcCCHhhcccCccc
Confidence 9999999999999999999999765443344567899999988888889999999866564
No 3
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=100.00 E-value=3.4e-36 Score=254.64 Aligned_cols=141 Identities=42% Similarity=0.685 Sum_probs=126.9
Q ss_pred ChHHHHHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCChhhhhHHH
Q 031674 2 NDTLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDKIDQNSK 81 (155)
Q Consensus 2 ~d~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~~~~~~~~ 81 (155)
+|.++|++++.||+.||++||+|+++||||+||||||||||++|++|+++|+....++||||||+||||+++|..|..++
T Consensus 140 ~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~~~~~~~~~ 219 (433)
T PLN03016 140 GDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMDFEQNFR 219 (433)
T ss_pred CCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCCCcCchhhhhhH
Confidence 46677899999999999999999999999999999999999999999999876556789999999999999999999999
Q ss_pred HHHhhhccccCHHHHHHHHhhcccccCCCCCChhhHHHHHHHHHHhcCCCcccccCCCCCC
Q 031674 82 IQFAYLNALITYEIYKSAKKNCKGDYVNVDPGNYLCKADLQNISAVRKGVTIILFICLLFL 142 (155)
Q Consensus 82 ~~~~~~~gli~~~~~~~~~~~C~~~~~~~~~~~~~C~~~~~~~~~~~~~in~Ydi~~~~c~ 142 (155)
.+|+|.+|||++++++.+++.|...+..+.+++..|..+++.+....+++|+|||+.+.|.
T Consensus 220 ~~y~~~~glI~~~~~~~i~~~c~~~~~~~~~~~~~C~~~~~~~~~~~~~~n~yni~~~~~~ 280 (433)
T PLN03016 220 IPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQCLKLTEEYHKCTAKINIHHILTPDCD 280 (433)
T ss_pred HHHHHhcCCCCHHHHHHHHHHhccccccCCCchHHHHHHHHHHHHHhcCCChhhccCCccc
Confidence 9999999999999999999999865443345577899999988888899999999976564
No 4
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=100.00 E-value=1.5e-35 Score=246.68 Aligned_cols=139 Identities=31% Similarity=0.532 Sum_probs=121.7
Q ss_pred CChHHHHHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCChhhhhHH
Q 031674 1 MNDTLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDKIDQNS 80 (155)
Q Consensus 1 ~~d~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~~~~~~~ 80 (155)
++++++|+++++||+.||.+||+|+++||||+||||||||||.+|.+|+++++.+..++||||||+||||++||..|..+
T Consensus 110 ~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~dp~~~~~s 189 (415)
T PF00450_consen 110 WNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWIDPRIQYNS 189 (415)
T ss_dssp -SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-SBHHHHHHH
T ss_pred chhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCcccccccccee
Confidence 37899999999999999999999999999999999999999999999999998765678999999999999999999999
Q ss_pred HHHHhhhccccCHHHHHHHHhhcccccCCCCCChhhHHHHHHHHHHh------cCCCcccccCCCC
Q 031674 81 KIQFAYLNALITYEIYKSAKKNCKGDYVNVDPGNYLCKADLQNISAV------RKGVTIILFICLL 140 (155)
Q Consensus 81 ~~~~~~~~gli~~~~~~~~~~~C~~~~~~~~~~~~~C~~~~~~~~~~------~~~in~Ydi~~~~ 140 (155)
+.+|++.+|+|++++++.+.+.|... ..|......|..++..+... .+++|+|||+.++
T Consensus 190 ~~~~~~~~gli~~~~~~~~~~~~~~~-~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~n~Ydi~~~~ 254 (415)
T PF00450_consen 190 YADYAYYHGLIDDQQYDDLNKACEAC-PQCQKAITECAAALDELSCQYAISQCNGGINPYDIRQPC 254 (415)
T ss_dssp HHHHHHHTTSS-HHHHHHHHHHHTTS-HSSSCCHHHHHHHHHHHHHHCHHHHHHTTSETTSTTSEE
T ss_pred ecccccccCcccHHHHHHHHHHhhcc-ccccchhhHHHHHHHhhhhhcccccccCCcceeeeeccc
Confidence 99999999999999999999999643 12244578899988888753 4899999999983
No 5
>PLN02209 serine carboxypeptidase
Probab=100.00 E-value=1.8e-34 Score=244.36 Aligned_cols=142 Identities=41% Similarity=0.691 Sum_probs=122.5
Q ss_pred ChHHHHHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCChhhhhHHH
Q 031674 2 NDTLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDKIDQNSK 81 (155)
Q Consensus 2 ~d~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~~~~~~~~ 81 (155)
+|+++|+++++||+.||++||+|+++||||+||||||||||.+|++|++.|+....++||||||+|||||+||..|..++
T Consensus 142 ~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td~~~q~~~~ 221 (437)
T PLN02209 142 SDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITHIEFEQNFR 221 (437)
T ss_pred CCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccChhhhhhhH
Confidence 45678899999999999999999999999999999999999999999998875555789999999999999999999999
Q ss_pred HHHhhhccccCHHHHHHHHhhcccccCCCCCChhhHHHHHHHHHHhcCCCcccccCCCCCCC
Q 031674 82 IQFAYLNALITYEIYKSAKKNCKGDYVNVDPGNYLCKADLQNISAVRKGVTIILFICLLFLN 143 (155)
Q Consensus 82 ~~~~~~~gli~~~~~~~~~~~C~~~~~~~~~~~~~C~~~~~~~~~~~~~in~Ydi~~~~c~~ 143 (155)
.+|++.+|||++++++.+++.|......+.+.+..|..++..+......+|.|++..+.|..
T Consensus 222 ~~y~~~~glI~~~~~~~~~~~c~~~~~~~~~~~~~C~~~i~~~~~~~~~~~~~~~~~~~c~~ 283 (437)
T PLN02209 222 IPYAHGMSLISDELYESLKRICKGNYFSVDPSNKKCLKLVEEYHKCTDNINSHHTLIANCDD 283 (437)
T ss_pred HHHHhccCCCCHHHHHHHHHhcccccccCCCChHHHHHHHHHHHHHhhcCCccccccccccc
Confidence 99999999999999999999997643322345678999888877777778887755444543
No 6
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=99.97 E-value=4.3e-32 Score=231.46 Aligned_cols=152 Identities=21% Similarity=0.369 Sum_probs=120.9
Q ss_pred ChHHHHHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCChhhhhHHH
Q 031674 2 NDTLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDKIDQNSK 81 (155)
Q Consensus 2 ~d~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~~~~~~~~ 81 (155)
+++++|+|+++||+.||++||+++.+|+||+||||||+|+|.+|.+|+++|+.+..++||||||+|||||+||..|..++
T Consensus 146 ~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~dp~~q~~~~ 225 (462)
T PTZ00472 146 NESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLTDPYTQYASY 225 (462)
T ss_pred ChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccccChhhhcccH
Confidence 57899999999999999999999999999999999999999999999999987666789999999999999999999999
Q ss_pred HHHhhh-------ccccCHHHHHHHHh---hcccccCCCC----CChhhHHHHHHHHHH-----hcCCCcccccCCCCCC
Q 031674 82 IQFAYL-------NALITYEIYKSAKK---NCKGDYVNVD----PGNYLCKADLQNISA-----VRKGVTIILFICLLFL 142 (155)
Q Consensus 82 ~~~~~~-------~gli~~~~~~~~~~---~C~~~~~~~~----~~~~~C~~~~~~~~~-----~~~~in~Ydi~~~~c~ 142 (155)
.+|+|. +|+|++++++.+++ .|......|. .....|..+...|.. ..+++|+|||+.+ |.
T Consensus 226 ~~~a~~~~~~~~~~~li~~~~~~~~~~~~~~c~~~~~~c~~~~~~~~~~c~~a~~~c~~~~~~~~~~g~n~Ydi~~~-c~ 304 (462)
T PTZ00472 226 PRLAWDWCKEKLGAPCVSEEAYDEMSSMVPACQKKIKECNSNPDDADSSCSVARALCNEYIAVYSATGLNNYDIRKP-CI 304 (462)
T ss_pred HHHhhhcccccCCCCccCHHHHHHHHHHHHHHHHHHHhccccCCCcchHHHHHHHHHHHHHHHHHhcCCChhheecc-CC
Confidence 999995 58999999988875 4543221121 123345444433322 1378999999986 64
Q ss_pred CCC----CCccccccC
Q 031674 143 NTI----SSTPNYLTD 154 (155)
Q Consensus 143 ~~~----~~~~~~l~~ 154 (155)
+.. .-+.+|||.
T Consensus 305 ~~~c~~~~~~~~yLN~ 320 (462)
T PTZ00472 305 GPLCYNMDNTIAFMNR 320 (462)
T ss_pred CCCccCHHHHHHHhCC
Confidence 321 226788885
No 7
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.89 E-value=3.9e-24 Score=172.47 Aligned_cols=143 Identities=20% Similarity=0.210 Sum_probs=122.0
Q ss_pred CChHHHHHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCChhhhhHH
Q 031674 1 MNDTLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDKIDQNS 80 (155)
Q Consensus 1 ~~d~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~~~~~~~ 80 (155)
++++++|.|+...|+.||..||||+.+||||+.|||||++.|.+|..+.+..++|. ++.|+.||++|++||+|.....+
T Consensus 96 ~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~-i~~nf~~VaLGDSWISP~D~V~S 174 (414)
T KOG1283|consen 96 TNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGE-IKLNFIGVALGDSWISPEDFVFS 174 (414)
T ss_pred ccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCc-eeecceeEEccCcccChhHhhhc
Confidence 47899999999999999999999999999999999999999999999999998865 68999999999999999999999
Q ss_pred HHHHhhhccccCHHHHHHHHh---hcccccCCC--CCChhhHHHHHHHHHHhcCCCcccccCCCCCCCC
Q 031674 81 KIQFAYLNALITYEIYKSAKK---NCKGDYVNV--DPGNYLCKADLQNISAVRKGVTIILFICLLFLNT 144 (155)
Q Consensus 81 ~~~~~~~~gli~~~~~~~~~~---~C~~~~~~~--~~~~~~C~~~~~~~~~~~~~in~Ydi~~~~c~~~ 144 (155)
+.+|++..+++|+++.+...+ +|.+..... ..+...+..+.+.+...+.++|+|||.+++-++.
T Consensus 175 WGP~L~~~S~LDD~GLds~ns~A~k~~~~v~~g~~~~AT~~Wg~~e~li~~~sn~VdfYNil~~t~~d~ 243 (414)
T KOG1283|consen 175 WGPLLKHVSRLDDNGLDSSNSGAEKGKGGVDGGKWGGATGGWGGGENLISRESNGVDFYNILTKTLGDQ 243 (414)
T ss_pred chHHHHhhhhhcccCccchhhhHHhhcccccCCccccccccccCcCcceeecccCcceeeeeccCCCcc
Confidence 999999999999998877654 554321110 2334456667777888899999999999865544
No 8
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=99.86 E-value=2.4e-21 Score=164.06 Aligned_cols=136 Identities=21% Similarity=0.338 Sum_probs=110.7
Q ss_pred hHHHHHHHHHHHHHHHHHccccCCC--CeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCC-CCChhhhhH
Q 031674 3 DTLSATQIYHFLRKWLIVHSDFLAN--PLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNP-VTDDKIDQN 79 (155)
Q Consensus 3 d~~~a~d~~~fL~~f~~~fp~~~~~--~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng-~~d~~~~~~ 79 (155)
-..+++|++.|++.||+.||++.+. |+||+||||||+|+|.+|.+|++++..-+ ..+||++++|||| +|+|..|+.
T Consensus 172 ~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~-~~~nlssvligng~~t~Pl~~~~ 250 (498)
T COG2939 172 FEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALN-GNVNLSSVLIGNGLWTDPLTQYL 250 (498)
T ss_pred hhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccC-CceEeeeeeecCCcccChhHHHH
Confidence 3567899999999999999999887 99999999999999999999999864322 3799999999999 999999999
Q ss_pred HHHHHhhhc----cccCHHHHHHHHhhcccccC-----CC--CCChhhHHHHHHHHHHhc------CC---CcccccCCC
Q 031674 80 SKIQFAYLN----ALITYEIYKSAKKNCKGDYV-----NV--DPGNYLCKADLQNISAVR------KG---VTIILFICL 139 (155)
Q Consensus 80 ~~~~~~~~~----gli~~~~~~~~~~~C~~~~~-----~~--~~~~~~C~~~~~~~~~~~------~~---in~Ydi~~~ 139 (155)
.|..++..+ +.++.+.++.+.+.|...+. .| ......|..+...+.... .+ .|+||++..
T Consensus 251 ~y~~~a~~~~~~~~~l~~e~~~~~~~~~~~d~~~~l~~g~~~~~~~~~c~~~~~~~~~~~~~~~~r~~~~~~n~y~~r~~ 330 (498)
T COG2939 251 TYEPIAAEKGPYDGVLSSEECTKAEKYCAGDYCLALMKGCYDSGSLQPCENASAYLTGLMREYVGRAGGRLLNVYDIREE 330 (498)
T ss_pred HhhhhHhhcCCCCCcCcHHHHHHHHHHhhhhhHhhhccCCCCchhhhHHHHHHHHHHhcchhhhccccccccccccchhh
Confidence 999999854 45667788888888875331 12 233457888888776543 34 899999965
No 9
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=93.79 E-value=0.13 Score=38.56 Aligned_cols=62 Identities=21% Similarity=0.145 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHHc--cccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCCh
Q 031674 7 ATQIYHFLRKWLIVH--SDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDD 74 (155)
Q Consensus 7 a~d~~~fL~~f~~~f--p~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~ 74 (155)
.+|...+++-..+.- -.+...+++|+|+|=||+.+-.++..+.+.. ...++++++-.|++|.
T Consensus 49 ~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~------~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 49 LEDVKAAYRWLLKNADKLGIDPERIVLIGDSAGGHLALSLALRARDRG------LPKPKGIILISPWTDL 112 (211)
T ss_dssp HHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTT------TCHESEEEEESCHSST
T ss_pred ccccccceeeeccccccccccccceEEeecccccchhhhhhhhhhhhc------ccchhhhhcccccccc
Confidence 345555444333320 1355568999999999999999998887753 2348999999999877
No 10
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=93.73 E-value=0.1 Score=39.25 Aligned_cols=40 Identities=15% Similarity=0.081 Sum_probs=29.3
Q ss_pred CCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCCh
Q 031674 25 LANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDD 74 (155)
Q Consensus 25 ~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~ 74 (155)
...+++++|+|+||..+..+|.+. .-.++++++-+++..+
T Consensus 78 ~~~~~~l~G~S~Gg~~a~~~a~~~----------~~~v~~~i~~~~~~~~ 117 (257)
T TIGR03611 78 NIERFHFVGHALGGLIGLQLALRY----------PERLLSLVLINAWSRP 117 (257)
T ss_pred CCCcEEEEEechhHHHHHHHHHHC----------hHHhHHheeecCCCCC
Confidence 345799999999999888887642 1246777777776654
No 11
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=93.70 E-value=0.19 Score=38.06 Aligned_cols=63 Identities=14% Similarity=0.123 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCChhhhhH
Q 031674 6 SATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDKIDQN 79 (155)
Q Consensus 6 ~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~~~~~~ 79 (155)
..+|+..+++...++. ......+.|+|.|+||+.+-.++.. . .-.++.++.++|.+|+.....
T Consensus 44 ~~~D~~~~i~~l~~~~-~iD~~ri~i~G~S~GG~~a~~~~~~---~-------~~~f~a~v~~~g~~d~~~~~~ 106 (213)
T PF00326_consen 44 DVDDVVAAIEYLIKQY-YIDPDRIGIMGHSYGGYLALLAATQ---H-------PDRFKAAVAGAGVSDLFSYYG 106 (213)
T ss_dssp HHHHHHHHHHHHHHTT-SEEEEEEEEEEETHHHHHHHHHHHH---T-------CCGSSEEEEESE-SSTTCSBH
T ss_pred chhhHHHHHHHHhccc-cccceeEEEEcccccccccchhhcc---c-------ceeeeeeeccceecchhcccc
Confidence 4566766665554443 5556789999999999987776662 1 224689999999999875543
No 12
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=93.65 E-value=0.26 Score=35.87 Aligned_cols=54 Identities=19% Similarity=0.145 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCChh
Q 031674 9 QIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDK 75 (155)
Q Consensus 9 d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~~ 75 (155)
+....+..+++.... .+++|.|+|+||..+-.++.+. .-.++|+++-++.....
T Consensus 51 ~~~~~l~~~l~~~~~---~~~~lvG~S~Gg~~a~~~a~~~----------p~~v~~~vl~~~~~~~~ 104 (228)
T PF12697_consen 51 DYAEDLAELLDALGI---KKVILVGHSMGGMIALRLAARY----------PDRVKGLVLLSPPPPLP 104 (228)
T ss_dssp HHHHHHHHHHHHTTT---SSEEEEEETHHHHHHHHHHHHS----------GGGEEEEEEESESSSHH
T ss_pred hhhhhhhhccccccc---cccccccccccccccccccccc----------ccccccceeeccccccc
Confidence 344445555554332 6899999999999888777552 22789999999888653
No 13
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=93.64 E-value=0.19 Score=41.17 Aligned_cols=68 Identities=15% Similarity=0.228 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHHHHHH--------cc--------ccC-CCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeE
Q 031674 4 TLSATQIYHFLRKWLIV--------HS--------DFL-ANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYM 66 (155)
Q Consensus 4 ~~~a~d~~~fL~~f~~~--------fp--------~~~-~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~ 66 (155)
+..++|+..+++...+. ++ ++. ..|++|.|+|.||..+-.++...-+.... ..+..++|++
T Consensus 102 ~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~~~~~~~--~~~~~i~g~i 179 (332)
T TIGR01607 102 DDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELLGKSNEN--NDKLNIKGCI 179 (332)
T ss_pred HHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHhcccccc--ccccccceEE
Confidence 34556777777655431 00 233 57999999999998777666554321110 0124688888
Q ss_pred ecCCCCC
Q 031674 67 LGNPVTD 73 (155)
Q Consensus 67 iGng~~d 73 (155)
+-.|++.
T Consensus 180 ~~s~~~~ 186 (332)
T TIGR01607 180 SLSGMIS 186 (332)
T ss_pred EeccceE
Confidence 7666653
No 14
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=93.43 E-value=0.26 Score=34.59 Aligned_cols=63 Identities=19% Similarity=0.323 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCCh
Q 031674 6 SATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDD 74 (155)
Q Consensus 6 ~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~ 74 (155)
....+...|++...+.| ...+.|+|+|-||-.+..+|..+.+.... ...+++-+..|.|-+..
T Consensus 46 ~~~~~~~~l~~~~~~~~---~~~i~itGHSLGGalA~l~a~~l~~~~~~---~~~~~~~~~fg~P~~~~ 108 (140)
T PF01764_consen 46 LYDQILDALKELVEKYP---DYSIVITGHSLGGALASLAAADLASHGPS---SSSNVKCYTFGAPRVGN 108 (140)
T ss_dssp HHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHHHHHCTTT---STTTEEEEEES-S--BE
T ss_pred HHHHHHHHHHHHHhccc---CccchhhccchHHHHHHHHHHhhhhcccc---cccceeeeecCCccccC
Confidence 34566677777777776 46799999999999999999999886532 24778888888887743
No 15
>PLN02454 triacylglycerol lipase
Probab=93.05 E-value=0.32 Score=41.63 Aligned_cols=68 Identities=13% Similarity=0.239 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCChh
Q 031674 5 LSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDK 75 (155)
Q Consensus 5 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~~ 75 (155)
++.+++...+++..+++|..+- .++++|||-||-.+-..|..|...... ...++++.+..|.|-+...
T Consensus 207 S~r~qvl~~V~~l~~~Yp~~~~-sI~vTGHSLGGALAtLaA~di~~~g~~--~~~~~V~~~TFGsPRVGN~ 274 (414)
T PLN02454 207 SARSQLLAKIKELLERYKDEKL-SIVLTGHSLGASLATLAAFDIVENGVS--GADIPVTAIVFGSPQVGNK 274 (414)
T ss_pred HHHHHHHHHHHHHHHhCCCCCc-eEEEEecCHHHHHHHHHHHHHHHhccc--ccCCceEEEEeCCCcccCH
Confidence 5678899999999998987743 699999999999988888888764321 1245677889998887653
No 16
>PHA02857 monoglyceride lipase; Provisional
Probab=92.92 E-value=0.29 Score=38.25 Aligned_cols=55 Identities=11% Similarity=0.245 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCCh
Q 031674 7 ATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDD 74 (155)
Q Consensus 7 a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~ 74 (155)
.+|+..++..+.+. +...++++.|+|.||.-+..+|.+ . .-.++|+++.+|.+++
T Consensus 80 ~~d~~~~l~~~~~~---~~~~~~~lvG~S~GG~ia~~~a~~---~-------p~~i~~lil~~p~~~~ 134 (276)
T PHA02857 80 VRDVVQHVVTIKST---YPGVPVFLLGHSMGATISILAAYK---N-------PNLFTAMILMSPLVNA 134 (276)
T ss_pred HHHHHHHHHHHHhh---CCCCCEEEEEcCchHHHHHHHHHh---C-------ccccceEEEecccccc
Confidence 45555555444333 345689999999999866555532 1 1247999999988764
No 17
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=92.76 E-value=0.31 Score=41.47 Aligned_cols=62 Identities=15% Similarity=0.131 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHHHHHccccCC-CCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCChhh
Q 031674 5 LSATQIYHFLRKWLIVHSDFLA-NPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDKI 76 (155)
Q Consensus 5 ~~a~d~~~fL~~f~~~fp~~~~-~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~~~ 76 (155)
..|.|...+|..-...||.+.. .|+-+.|.|||| |+..|+.+|. +-.+.||+=-.+|.-|..
T Consensus 161 MqAiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~-yla~l~~k~a---------P~~~~~~iDns~~~~p~l 223 (403)
T PF11144_consen 161 MQAIDIINALLDLKKIFPKNGGGLPKIYIGSSHGG-YLAHLCAKIA---------PWLFDGVIDNSSYALPPL 223 (403)
T ss_pred HHHHHHHHHHHHHHHhhhcccCCCcEEEEecCcHH-HHHHHHHhhC---------ccceeEEEecCccccchh
Confidence 5788999999999999999986 799999999988 6777777662 345667777777777653
No 18
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=92.54 E-value=0.82 Score=34.75 Aligned_cols=39 Identities=18% Similarity=0.375 Sum_probs=29.2
Q ss_pred CCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCC
Q 031674 25 LANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTD 73 (155)
Q Consensus 25 ~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d 73 (155)
...++++.|+|+||..+..+|..- .-.++++++.++...
T Consensus 94 ~~~~~~liG~S~Gg~ia~~~a~~~----------p~~v~~lvl~~~~~~ 132 (288)
T TIGR01250 94 GLDKFYLLGHSWGGMLAQEYALKY----------GQHLKGLIISSMLDS 132 (288)
T ss_pred CCCcEEEEEeehHHHHHHHHHHhC----------ccccceeeEeccccc
Confidence 345699999999999888877641 235688888877654
No 19
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=92.35 E-value=0.32 Score=39.83 Aligned_cols=57 Identities=18% Similarity=0.253 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCC
Q 031674 5 LSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVT 72 (155)
Q Consensus 5 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~ 72 (155)
..++|+..+++. +...+++...+++|.|+|.||..+-.+|.+ . .-.++|+++-++..
T Consensus 141 ~~~~dv~~~l~~-l~~~~~~~~~~~~LvGhSmGG~val~~a~~---~-------p~~v~glVLi~p~~ 197 (349)
T PLN02385 141 DLVDDVIEHYSK-IKGNPEFRGLPSFLFGQSMGGAVALKVHLK---Q-------PNAWDGAILVAPMC 197 (349)
T ss_pred HHHHHHHHHHHH-HHhccccCCCCEEEEEeccchHHHHHHHHh---C-------cchhhheeEecccc
Confidence 445566666543 333345666689999999999866555432 1 12468888877754
No 20
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=91.93 E-value=0.58 Score=38.98 Aligned_cols=58 Identities=29% Similarity=0.494 Sum_probs=44.0
Q ss_pred HHHHH-HHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCChh
Q 031674 12 HFLRK-WLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDK 75 (155)
Q Consensus 12 ~fL~~-f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~~ 75 (155)
.+++. |....=++. .++|+|.|-||--+-.+|+++.+.. ...+.|+|.++--|++...
T Consensus 152 w~~~~~~~~~~~D~~--rv~l~GDSaGGNia~~va~r~~~~~----~~~~ki~g~ili~P~~~~~ 210 (336)
T KOG1515|consen 152 WVLKNSWLKLGADPS--RVFLAGDSAGGNIAHVVAQRAADEK----LSKPKIKGQILIYPFFQGT 210 (336)
T ss_pred HHHHhHHHHhCCCcc--cEEEEccCccHHHHHHHHHHHhhcc----CCCcceEEEEEEecccCCC
Confidence 33443 666655553 3999999999999999999998754 1368899999988877653
No 21
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=91.70 E-value=0.34 Score=35.78 Aligned_cols=38 Identities=18% Similarity=0.350 Sum_probs=27.7
Q ss_pred CCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCC
Q 031674 25 LANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVT 72 (155)
Q Consensus 25 ~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~ 72 (155)
...++.|.|+|+||..+..+|.+. .-.++++++-++..
T Consensus 68 ~~~~~~l~G~S~Gg~ia~~~a~~~----------~~~v~~lil~~~~~ 105 (251)
T TIGR03695 68 GIEPFFLVGYSMGGRIALYYALQY----------PERVQGLILESGSP 105 (251)
T ss_pred CCCeEEEEEeccHHHHHHHHHHhC----------chheeeeEEecCCC
Confidence 346899999999999888777753 12467777766543
No 22
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=91.62 E-value=0.4 Score=36.88 Aligned_cols=39 Identities=13% Similarity=-0.032 Sum_probs=27.6
Q ss_pred CCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCCh
Q 031674 26 ANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDD 74 (155)
Q Consensus 26 ~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~ 74 (155)
..+++|+|+|+||..+..+|..- .-.++++++.++...+
T Consensus 94 ~~~~~lvG~S~Gg~~a~~~a~~~----------p~~v~~~v~~~~~~~~ 132 (278)
T TIGR03056 94 LSPDGVIGHSAGAAIALRLALDG----------PVTPRMVVGINAALMP 132 (278)
T ss_pred CCCceEEEECccHHHHHHHHHhC----------CcccceEEEEcCcccc
Confidence 35789999999998776665431 2346788888776553
No 23
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=91.42 E-value=0.64 Score=37.54 Aligned_cols=59 Identities=19% Similarity=0.327 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCC
Q 031674 4 TLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTD 73 (155)
Q Consensus 4 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d 73 (155)
+..++|+..+++.... ..++...++.|+|+|.||..+-.++.. . .-.++|+++.+++..
T Consensus 112 ~~~~~D~~~~i~~l~~-~~~~~~~~i~l~GhSmGG~ia~~~a~~----~------p~~v~~lvl~~~~~~ 170 (330)
T PLN02298 112 DLVVEDCLSFFNSVKQ-REEFQGLPRFLYGESMGGAICLLIHLA----N------PEGFDGAVLVAPMCK 170 (330)
T ss_pred HHHHHHHHHHHHHHHh-cccCCCCCEEEEEecchhHHHHHHHhc----C------cccceeEEEeccccc
Confidence 3456777777764433 233445689999999999866554432 1 124789988888754
No 24
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=91.35 E-value=0.62 Score=35.87 Aligned_cols=58 Identities=17% Similarity=0.315 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCCh
Q 031674 9 QIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDD 74 (155)
Q Consensus 9 d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~ 74 (155)
++...++...+++| ..+++++|+|-||-.+-.+|..+.+.. ...+++.+..|.|-+-.
T Consensus 113 ~~~~~~~~~~~~~p---~~~i~vtGHSLGGaiA~l~a~~l~~~~-----~~~~i~~~tFg~P~vg~ 170 (229)
T cd00519 113 QVLPELKSALKQYP---DYKIIVTGHSLGGALASLLALDLRLRG-----PGSDVTVYTFGQPRVGN 170 (229)
T ss_pred HHHHHHHHHHhhCC---CceEEEEccCHHHHHHHHHHHHHHhhC-----CCCceEEEEeCCCCCCC
Confidence 33444555555544 457999999999999998888887653 24567888889877743
No 25
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=91.31 E-value=0.46 Score=34.23 Aligned_cols=58 Identities=14% Similarity=0.204 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCC
Q 031674 8 TQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTD 73 (155)
Q Consensus 8 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d 73 (155)
..+...+++...++| ..+++|+|+|-||..+-.+|.++.+... .-..+-+..|-+-+-
T Consensus 12 ~~i~~~~~~~~~~~p---~~~i~v~GHSlGg~lA~l~a~~~~~~~~-----~~~~~~~~fg~p~~~ 69 (153)
T cd00741 12 NLVLPLLKSALAQYP---DYKIHVTGHSLGGALAGLAGLDLRGRGL-----GRLVRVYTFGPPRVG 69 (153)
T ss_pred HHHHHHHHHHHHHCC---CCeEEEEEcCHHHHHHHHHHHHHHhccC-----CCceEEEEeCCCccc
Confidence 334444444444444 4579999999999999999998876531 223445566655443
No 26
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=90.90 E-value=0.37 Score=36.51 Aligned_cols=38 Identities=16% Similarity=0.274 Sum_probs=31.1
Q ss_pred CeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCC
Q 031674 28 PLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVT 72 (155)
Q Consensus 28 ~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~ 72 (155)
|++|+|.|+||.-+=.+|+++.+.. ...+.+++-++..
T Consensus 67 p~~L~G~S~Gg~lA~E~A~~Le~~G-------~~v~~l~liD~~~ 104 (229)
T PF00975_consen 67 PYVLAGWSFGGILAFEMARQLEEAG-------EEVSRLILIDSPP 104 (229)
T ss_dssp SEEEEEETHHHHHHHHHHHHHHHTT--------SESEEEEESCSS
T ss_pred CeeehccCccHHHHHHHHHHHHHhh-------hccCceEEecCCC
Confidence 9999999999999999999998753 4567888888543
No 27
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=90.76 E-value=0.5 Score=37.88 Aligned_cols=56 Identities=11% Similarity=0.155 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCC
Q 031674 5 LSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPV 71 (155)
Q Consensus 5 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~ 71 (155)
.+++++..+|+...+.. .....++++.|+|.||+-+-.+|.++-+ +++.|+.-+|.
T Consensus 91 ~v~~~la~~l~~L~~~~-g~~~~~i~lIGhSlGa~vAg~~a~~~~~----------~v~~iv~LDPa 146 (275)
T cd00707 91 VVGAELAKFLDFLVDNT-GLSLENVHLIGHSLGAHVAGFAGKRLNG----------KLGRITGLDPA 146 (275)
T ss_pred HHHHHHHHHHHHHHHhc-CCChHHEEEEEecHHHHHHHHHHHHhcC----------ccceeEEecCC
Confidence 34566666666555432 2344579999999999998888876521 45666665543
No 28
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=90.10 E-value=0.75 Score=39.11 Aligned_cols=52 Identities=12% Similarity=-0.057 Sum_probs=39.2
Q ss_pred HHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCC
Q 031674 12 HFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTD 73 (155)
Q Consensus 12 ~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d 73 (155)
..+.+|+...|.....++.++|.|+||..++.+|..- .-.++++++.+|.++
T Consensus 250 ~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~----------p~ri~a~V~~~~~~~ 301 (414)
T PRK05077 250 QAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLE----------PPRLKAVACLGPVVH 301 (414)
T ss_pred HHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhC----------CcCceEEEEECCccc
Confidence 4556677777877777899999999999999887531 125678888777765
No 29
>PRK10749 lysophospholipase L2; Provisional
Probab=89.87 E-value=0.65 Score=37.79 Aligned_cols=56 Identities=14% Similarity=0.110 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCC
Q 031674 5 LSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTD 73 (155)
Q Consensus 5 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d 73 (155)
..++|+..+++..... +...++++.|+|.||..+-.+|.+ . .-.++|+++.++...
T Consensus 112 ~~~~d~~~~~~~~~~~---~~~~~~~l~GhSmGG~ia~~~a~~---~-------p~~v~~lvl~~p~~~ 167 (330)
T PRK10749 112 DYVDDLAAFWQQEIQP---GPYRKRYALAHSMGGAILTLFLQR---H-------PGVFDAIALCAPMFG 167 (330)
T ss_pred HHHHHHHHHHHHHHhc---CCCCCeEEEEEcHHHHHHHHHHHh---C-------CCCcceEEEECchhc
Confidence 3445555555544332 334689999999999766555542 1 123688888888653
No 30
>PLN02571 triacylglycerol lipase
Probab=89.52 E-value=1.3 Score=37.93 Aligned_cols=70 Identities=11% Similarity=0.176 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcc--cC--CCCCccccceeEecCCCCChh
Q 031674 5 LSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGI--DA--GHKPRMNLKGYMLGNPVTDDK 75 (155)
Q Consensus 5 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n--~~--~~~~~inLkGi~iGng~~d~~ 75 (155)
.+..+++..++.+.+++|.. ..+++++|+|-||-.+-..|..|.... .. .....+.+..+..|.|-+...
T Consensus 205 Sar~qvl~eV~~L~~~y~~e-~~sI~VTGHSLGGALAtLaA~dl~~~g~n~~~~~~~~~~~V~v~TFGsPRVGN~ 278 (413)
T PLN02571 205 SARDQVLNEVGRLVEKYKDE-EISITICGHSLGAALATLNAVDIVANGFNRSKSRPNKSCPVTAFVFASPRVGDS 278 (413)
T ss_pred hHHHHHHHHHHHHHHhcCcc-cccEEEeccchHHHHHHHHHHHHHHhcccccccccccCcceEEEEeCCCCccCH
Confidence 55678889999999988876 347999999999999988888886531 10 011235677888888777653
No 31
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=89.36 E-value=0.84 Score=36.24 Aligned_cols=36 Identities=17% Similarity=0.230 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHH
Q 031674 9 QIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQ 46 (155)
Q Consensus 9 d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~ 46 (155)
++...+..++..... ..+++|.|+|+||..+-.++.
T Consensus 71 ~~~~~l~~~i~~l~~--~~~v~lvGhS~GG~v~~~~a~ 106 (273)
T PLN02211 71 EYNKPLIDFLSSLPE--NEKVILVGHSAGGLSVTQAIH 106 (273)
T ss_pred HHHHHHHHHHHhcCC--CCCEEEEEECchHHHHHHHHH
Confidence 344555555554322 368999999999996666664
No 32
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=89.22 E-value=1.2 Score=33.86 Aligned_cols=41 Identities=17% Similarity=0.199 Sum_probs=31.8
Q ss_pred CCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCChhhhhH
Q 031674 26 ANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDKIDQN 79 (155)
Q Consensus 26 ~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~~~~~~ 79 (155)
...+.|.|-|-||.|+-.+|.+. +++. +|-||.+.|.....
T Consensus 58 ~~~~~liGSSlGG~~A~~La~~~------------~~~a-vLiNPav~p~~~l~ 98 (187)
T PF05728_consen 58 PENVVLIGSSLGGFYATYLAERY------------GLPA-VLINPAVRPYELLQ 98 (187)
T ss_pred CCCeEEEEEChHHHHHHHHHHHh------------CCCE-EEEcCCCCHHHHHH
Confidence 34599999999999999888754 3444 67799999976554
No 33
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=88.74 E-value=1.2 Score=37.73 Aligned_cols=59 Identities=20% Similarity=0.227 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCCh
Q 031674 5 LSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDD 74 (155)
Q Consensus 5 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~ 74 (155)
..++|+..+++..-..+| ..+++|+|+|.||.-+..++. ..+ ..-.++|+++.++++..
T Consensus 189 ~~~~Dl~~~l~~l~~~~~---~~~i~lvGhSmGG~ial~~a~----~p~----~~~~v~glVL~sP~l~~ 247 (395)
T PLN02652 189 YVVEDTEAFLEKIRSENP---GVPCFLFGHSTGGAVVLKAAS----YPS----IEDKLEGIVLTSPALRV 247 (395)
T ss_pred HHHHHHHHHHHHHHHhCC---CCCEEEEEECHHHHHHHHHHh----ccC----cccccceEEEECccccc
Confidence 446677777776665554 348999999999987654442 111 12358899999988643
No 34
>PRK10162 acetyl esterase; Provisional
Probab=88.58 E-value=1.1 Score=36.55 Aligned_cols=45 Identities=16% Similarity=0.024 Sum_probs=34.4
Q ss_pred CCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCCh
Q 031674 26 ANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDD 74 (155)
Q Consensus 26 ~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~ 74 (155)
..++.|+|+|.||+.+-.++....+... ....++|+++-.|+++.
T Consensus 153 ~~~i~l~G~SaGG~la~~~a~~~~~~~~----~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 153 MSRIGFAGDSAGAMLALASALWLRDKQI----DCGKVAGVLLWYGLYGL 197 (318)
T ss_pred hhHEEEEEECHHHHHHHHHHHHHHhcCC----CccChhheEEECCccCC
Confidence 4579999999999999998887755321 12457888888888775
No 35
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=88.22 E-value=0.85 Score=38.67 Aligned_cols=71 Identities=15% Similarity=0.220 Sum_probs=44.3
Q ss_pred ChHHHHHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCChhhhhHHH
Q 031674 2 NDTLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDKIDQNSK 81 (155)
Q Consensus 2 ~d~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~~~~~~~~ 81 (155)
+-+++-.|+..|++.+-.++....+.|+.++|-||||....-+-.+- |.+ +.|..--.|.+....++..|
T Consensus 88 t~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~ky---------P~~-~~ga~ASSapv~a~~df~~y 157 (434)
T PF05577_consen 88 TSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKY---------PHL-FDGAWASSAPVQAKVDFWEY 157 (434)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH----------TTT--SEEEEET--CCHCCTTTHH
T ss_pred CHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhC---------CCe-eEEEEeccceeeeecccHHH
Confidence 45778899999999998888777778999999999997544333221 233 44555555666655444433
Q ss_pred H
Q 031674 82 I 82 (155)
Q Consensus 82 ~ 82 (155)
.
T Consensus 158 ~ 158 (434)
T PF05577_consen 158 F 158 (434)
T ss_dssp H
T ss_pred H
Confidence 3
No 36
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=88.15 E-value=0.97 Score=33.43 Aligned_cols=37 Identities=16% Similarity=0.094 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHH
Q 031674 4 TLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQE 47 (155)
Q Consensus 4 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~ 47 (155)
++.++++..+++.+ ...++++.|+|+||..+-.+|.+
T Consensus 63 ~~~~~~~~~~i~~~-------~~~~v~liG~S~Gg~~a~~~a~~ 99 (251)
T TIGR02427 63 EDLADDVLALLDHL-------GIERAVFCGLSLGGLIAQGLAAR 99 (251)
T ss_pred HHHHHHHHHHHHHh-------CCCceEEEEeCchHHHHHHHHHH
Confidence 34455555555432 33579999999999988777764
No 37
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=87.81 E-value=0.39 Score=42.94 Aligned_cols=60 Identities=13% Similarity=0.082 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCChhhh
Q 031674 6 SATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDKID 77 (155)
Q Consensus 6 ~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~~~~ 77 (155)
..+|+..+++ |+.+.|..-..++.|+|.||||.+.-.++.. . . .+|..+...|.++....
T Consensus 453 ~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~----~------~-~f~a~~~~~~~~~~~~~ 512 (620)
T COG1506 453 DLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATK----T------P-RFKAAVAVAGGVDWLLY 512 (620)
T ss_pred cHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhc----C------c-hhheEEeccCcchhhhh
Confidence 3578889999 9999999988899999999999654433332 1 2 57777777787777544
No 38
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=87.78 E-value=1.1 Score=33.99 Aligned_cols=38 Identities=18% Similarity=0.224 Sum_probs=26.3
Q ss_pred CCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCC
Q 031674 25 LANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPV 71 (155)
Q Consensus 25 ~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~ 71 (155)
...++++.|+|+||..+-.+|.+. . .-.++++++.++.
T Consensus 64 ~~~~~~lvG~S~Gg~va~~~a~~~---~------~~~v~~lvl~~~~ 101 (242)
T PRK11126 64 NILPYWLVGYSLGGRIAMYYACQG---L------AGGLCGLIVEGGN 101 (242)
T ss_pred CCCCeEEEEECHHHHHHHHHHHhC---C------cccccEEEEeCCC
Confidence 446899999999998777766642 1 1126788886654
No 39
>PLN02753 triacylglycerol lipase
Probab=87.42 E-value=2.1 Score=37.80 Aligned_cols=72 Identities=14% Similarity=0.180 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHHHHHHccc--cCCCCeEEEeeccCccchhHHHHHHHhc--ccCCCCCccccceeEecCCCCChh
Q 031674 4 TLSATQIYHFLRKWLIVHSD--FLANPLYIAGDSYSGKIVPIVVQEISDG--IDAGHKPRMNLKGYMLGNPVTDDK 75 (155)
Q Consensus 4 ~~~a~d~~~fL~~f~~~fp~--~~~~~~yi~GESYgG~yvP~~a~~i~~~--n~~~~~~~inLkGi~iGng~~d~~ 75 (155)
..+.++++..++....++|. .....++|+|+|-||-.+-..|..|... +.......+++.-+..|.|-+...
T Consensus 287 ~S~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~Dla~~g~n~~~~~~~~pV~vyTFGsPRVGN~ 362 (531)
T PLN02753 287 FSAREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDIAEMGLNRSKKGKVIPVTVLTYGGPRVGNV 362 (531)
T ss_pred hhHHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHHHHHhcccccccCccCceEEEEeCCCCccCH
Confidence 35678899999999988874 2345799999999999999988888753 111111245677788887777654
No 40
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=87.35 E-value=3.3 Score=32.78 Aligned_cols=57 Identities=11% Similarity=0.084 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCCh
Q 031674 5 LSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDD 74 (155)
Q Consensus 5 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~ 74 (155)
....|+..+++.+-+..|.+ .++.++|+|.||..+-.+|.. .-.++|+++-++++..
T Consensus 80 ~~~~d~~~~~~~l~~~~~g~--~~i~l~G~S~Gg~~a~~~a~~-----------~~~v~~lil~~p~~~~ 136 (274)
T TIGR03100 80 GIDADIAAAIDAFREAAPHL--RRIVAWGLCDAASAALLYAPA-----------DLRVAGLVLLNPWVRT 136 (274)
T ss_pred HHHHHHHHHHHHHHhhCCCC--CcEEEEEECHHHHHHHHHhhh-----------CCCccEEEEECCccCC
Confidence 34567777777665555544 359999999999654444321 1258999999999764
No 41
>PLN02719 triacylglycerol lipase
Probab=86.92 E-value=2.1 Score=37.65 Aligned_cols=71 Identities=10% Similarity=0.180 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHHHHccccC--CCCeEEEeeccCccchhHHHHHHHhcc--cCCCCCccccceeEecCCCCChh
Q 031674 5 LSATQIYHFLRKWLIVHSDFL--ANPLYIAGDSYSGKIVPIVVQEISDGI--DAGHKPRMNLKGYMLGNPVTDDK 75 (155)
Q Consensus 5 ~~a~d~~~fL~~f~~~fp~~~--~~~~yi~GESYgG~yvP~~a~~i~~~n--~~~~~~~inLkGi~iGng~~d~~ 75 (155)
.+.+++...+++..+++|... ...++|+|+|-||-.+-..|..|.+.. +......+.+.-+..|.|-+...
T Consensus 274 SaReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl~~~gln~~~~~~~~pVtvyTFGsPRVGN~ 348 (518)
T PLN02719 274 SAREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDVAEMGLNRTRKGKVIPVTAFTYGGPRVGNI 348 (518)
T ss_pred hHHHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHHHHhcccccccccccceEEEEecCCCccCH
Confidence 566788999999999998753 346999999999999999998887631 11111234566778887777654
No 42
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=86.73 E-value=1.1 Score=39.43 Aligned_cols=59 Identities=15% Similarity=0.084 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCChh
Q 031674 5 LSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDK 75 (155)
Q Consensus 5 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~~ 75 (155)
..++|+.++++ |+.+.|. ...++.++|.||||...-.+|.. . .-.||+++...++.|..
T Consensus 77 ~~~~D~~~~i~-~l~~q~~-~~~~v~~~G~S~GG~~a~~~a~~----~------~~~l~aiv~~~~~~d~~ 135 (550)
T TIGR00976 77 DEAADGYDLVD-WIAKQPW-CDGNVGMLGVSYLAVTQLLAAVL----Q------PPALRAIAPQEGVWDLY 135 (550)
T ss_pred ccchHHHHHHH-HHHhCCC-CCCcEEEEEeChHHHHHHHHhcc----C------CCceeEEeecCcccchh
Confidence 34567766665 6666653 34589999999999765544432 1 24689999888887643
No 43
>PLN00021 chlorophyllase
Probab=86.31 E-value=1.8 Score=35.56 Aligned_cols=43 Identities=21% Similarity=0.158 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHHH-cc---ccCCCCeEEEeeccCccchhHHHHHH
Q 031674 6 SATQIYHFLRKWLIV-HS---DFLANPLYIAGDSYSGKIVPIVVQEI 48 (155)
Q Consensus 6 ~a~d~~~fL~~f~~~-fp---~~~~~~~yi~GESYgG~yvP~~a~~i 48 (155)
.+.++..++.+-+.. -| +....+++|+|+|.||+.+-.+|...
T Consensus 101 d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~ 147 (313)
T PLN00021 101 DAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGK 147 (313)
T ss_pred HHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhc
Confidence 355556666654432 12 23335799999999999887777654
No 44
>PLN02965 Probable pheophorbidase
Probab=85.70 E-value=1.9 Score=33.36 Aligned_cols=51 Identities=14% Similarity=0.040 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCC
Q 031674 9 QIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPV 71 (155)
Q Consensus 9 d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~ 71 (155)
++.+.+.+++...+ ..+++++.|+|+||..+..+|.+. . =.++++++-++.
T Consensus 56 ~~a~dl~~~l~~l~--~~~~~~lvGhSmGG~ia~~~a~~~---p-------~~v~~lvl~~~~ 106 (255)
T PLN02965 56 QYNRPLFALLSDLP--PDHKVILVGHSIGGGSVTEALCKF---T-------DKISMAIYVAAA 106 (255)
T ss_pred HHHHHHHHHHHhcC--CCCCEEEEecCcchHHHHHHHHhC---c-------hheeEEEEEccc
Confidence 33444455554322 125899999999998777777532 1 134666665553
No 45
>PLN02578 hydrolase
Probab=85.65 E-value=1.2 Score=36.58 Aligned_cols=48 Identities=19% Similarity=0.224 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCC
Q 031674 6 SATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNP 70 (155)
Q Consensus 6 ~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng 70 (155)
.++++.+|++.. ...+++|.|+|+||..+..+|.+- .-.++++++.|+
T Consensus 138 ~a~~l~~~i~~~-------~~~~~~lvG~S~Gg~ia~~~A~~~----------p~~v~~lvLv~~ 185 (354)
T PLN02578 138 WRDQVADFVKEV-------VKEPAVLVGNSLGGFTALSTAVGY----------PELVAGVALLNS 185 (354)
T ss_pred HHHHHHHHHHHh-------ccCCeEEEEECHHHHHHHHHHHhC----------hHhcceEEEECC
Confidence 345555555432 246899999999998766666642 234677877664
No 46
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=85.09 E-value=1.2 Score=32.87 Aligned_cols=54 Identities=15% Similarity=0.195 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCC
Q 031674 5 LSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPV 71 (155)
Q Consensus 5 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~ 71 (155)
-...++.+.+..+.++.+ ..++++.|.|+||..+-.+|..- +. .++++++-++.
T Consensus 25 ~~~~~~~~~~~~~~~~l~---~~~~~~vG~S~Gg~~~~~~a~~~---------p~-~v~~lvl~~~~ 78 (230)
T PF00561_consen 25 YTTDDLAADLEALREALG---IKKINLVGHSMGGMLALEYAAQY---------PE-RVKKLVLISPP 78 (230)
T ss_dssp HCHHHHHHHHHHHHHHHT---TSSEEEEEETHHHHHHHHHHHHS---------GG-GEEEEEEESES
T ss_pred ccHHHHHHHHHHHHHHhC---CCCeEEEEECCChHHHHHHHHHC---------ch-hhcCcEEEeee
Confidence 345677777777777553 33499999999998776666542 12 78888888775
No 47
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=85.06 E-value=2.5 Score=35.83 Aligned_cols=45 Identities=18% Similarity=0.192 Sum_probs=36.4
Q ss_pred CCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCChh
Q 031674 26 ANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDK 75 (155)
Q Consensus 26 ~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~~ 75 (155)
..++.++|+|-||+-+-.+.+++.+.++. ... |.+++-.||+++.
T Consensus 194 ~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~----~~P-k~~iLISPWv~l~ 238 (374)
T PF10340_consen 194 NKNIILMGDSAGGNLALSFLQYLKKPNKL----PYP-KSAILISPWVNLV 238 (374)
T ss_pred CCeEEEEecCccHHHHHHHHHHHhhcCCC----CCC-ceeEEECCCcCCc
Confidence 45799999999999999999998775532 122 6888889999987
No 48
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=84.98 E-value=2 Score=36.24 Aligned_cols=53 Identities=11% Similarity=0.229 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCC
Q 031674 7 ATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVT 72 (155)
Q Consensus 7 a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~ 72 (155)
...+.+.+..|.... ...+++|.|+|.||.-+-.+|.+- .-.++++++.++..
T Consensus 159 ~~~~~~~i~~~~~~l---~~~~~~lvGhS~GG~la~~~a~~~----------p~~v~~lvl~~p~~ 211 (402)
T PLN02894 159 EAWFIDSFEEWRKAK---NLSNFILLGHSFGGYVAAKYALKH----------PEHVQHLILVGPAG 211 (402)
T ss_pred HHHHHHHHHHHHHHc---CCCCeEEEEECHHHHHHHHHHHhC----------chhhcEEEEECCcc
Confidence 344555666666532 334799999999998666555431 23567877777653
No 49
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=84.94 E-value=2.9 Score=32.72 Aligned_cols=73 Identities=14% Similarity=0.153 Sum_probs=50.4
Q ss_pred hHHHHHHHHHHHHHHHHHcccc-CCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCChhh
Q 031674 3 DTLSATQIYHFLRKWLIVHSDF-LANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDKI 76 (155)
Q Consensus 3 d~~~a~d~~~fL~~f~~~fp~~-~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~~~ 76 (155)
|.+.|..-...|.+|+...-+. ...+++|.++|-|+.-+-..-..+...... .....+|..|++-+|-+|...
T Consensus 68 d~~~a~~s~~~l~~~L~~L~~~~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~-~~~~~~~~~viL~ApDid~d~ 141 (233)
T PF05990_consen 68 DRESARFSGPALARFLRDLARAPGIKRIHILAHSMGNRVLLEALRQLASEGER-PDVKARFDNVILAAPDIDNDV 141 (233)
T ss_pred hhhhHHHHHHHHHHHHHHHHhccCCceEEEEEeCchHHHHHHHHHHHHhcccc-hhhHhhhheEEEECCCCCHHH
Confidence 4445555556666666654344 456899999999998887777777665431 012348899999999999854
No 50
>PRK03204 haloalkane dehalogenase; Provisional
Probab=84.88 E-value=1.9 Score=34.19 Aligned_cols=52 Identities=15% Similarity=0.200 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCC
Q 031674 8 TQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVT 72 (155)
Q Consensus 8 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~ 72 (155)
+++...+..+.+. +...+++|.|+|+||.-+-.+|. .. .-.++++++.++..
T Consensus 85 ~~~~~~~~~~~~~---~~~~~~~lvG~S~Gg~va~~~a~----~~------p~~v~~lvl~~~~~ 136 (286)
T PRK03204 85 DEHARVIGEFVDH---LGLDRYLSMGQDWGGPISMAVAV----ER------ADRVRGVVLGNTWF 136 (286)
T ss_pred HHHHHHHHHHHHH---hCCCCEEEEEECccHHHHHHHHH----hC------hhheeEEEEECccc
Confidence 4455555555543 33457999999999974433332 11 23578888887754
No 51
>PRK03592 haloalkane dehalogenase; Provisional
Probab=84.43 E-value=2.1 Score=33.81 Aligned_cols=40 Identities=5% Similarity=0.059 Sum_probs=28.8
Q ss_pred CCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCCh
Q 031674 25 LANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDD 74 (155)
Q Consensus 25 ~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~ 74 (155)
...+++|.|+|.||..+-.+|.+- .=.++++++.++...+
T Consensus 91 ~~~~~~lvGhS~Gg~ia~~~a~~~----------p~~v~~lil~~~~~~~ 130 (295)
T PRK03592 91 GLDDVVLVGHDWGSALGFDWAARH----------PDRVRGIAFMEAIVRP 130 (295)
T ss_pred CCCCeEEEEECHHHHHHHHHHHhC----------hhheeEEEEECCCCCC
Confidence 346899999999998776666532 2347889988875543
No 52
>PRK10566 esterase; Provisional
Probab=84.40 E-value=2.1 Score=32.78 Aligned_cols=39 Identities=15% Similarity=0.173 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHH
Q 031674 8 TQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQE 47 (155)
Q Consensus 8 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~ 47 (155)
+++..+ ..++.+.+.....++.|+|+|+||..+-.++.+
T Consensus 89 ~~~~~~-~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~ 127 (249)
T PRK10566 89 QEFPTL-RAAIREEGWLLDDRLAVGGASMGGMTALGIMAR 127 (249)
T ss_pred HHHHHH-HHHHHhcCCcCccceeEEeecccHHHHHHHHHh
Confidence 344333 344555555556789999999999988766543
No 53
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=84.36 E-value=2 Score=35.42 Aligned_cols=42 Identities=14% Similarity=0.313 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHH
Q 031674 4 TLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQ 46 (155)
Q Consensus 4 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~ 46 (155)
+.++.|...|+..+- ..++++..|.|++|||-||--+-.++.
T Consensus 107 d~~v~D~~~~~~~i~-~~~e~~~lp~FL~GeSMGGAV~Ll~~~ 148 (313)
T KOG1455|consen 107 DLVVDDVISFFDSIK-EREENKGLPRFLFGESMGGAVALLIAL 148 (313)
T ss_pred HHHHHHHHHHHHHHh-hccccCCCCeeeeecCcchHHHHHHHh
Confidence 344555555554443 466899999999999999964444443
No 54
>PLN02442 S-formylglutathione hydrolase
Probab=83.73 E-value=2.7 Score=33.65 Aligned_cols=43 Identities=14% Similarity=0.066 Sum_probs=29.8
Q ss_pred ccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCChh
Q 031674 23 DFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDK 75 (155)
Q Consensus 23 ~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~~ 75 (155)
.....+++|+|.|+||+-+-.+|.+ . .=.+++++..+|..++.
T Consensus 139 ~~~~~~~~i~G~S~GG~~a~~~a~~----~------p~~~~~~~~~~~~~~~~ 181 (283)
T PLN02442 139 QLDTSRASIFGHSMGGHGALTIYLK----N------PDKYKSVSAFAPIANPI 181 (283)
T ss_pred hcCCCceEEEEEChhHHHHHHHHHh----C------chhEEEEEEECCccCcc
Confidence 3455679999999999765555443 1 12367888888888764
No 55
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=83.70 E-value=1.6 Score=34.19 Aligned_cols=52 Identities=12% Similarity=0.146 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCC
Q 031674 9 QIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTD 73 (155)
Q Consensus 9 d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d 73 (155)
++...+.+|+.. +.-.+++|.|+|.||..+-.+|.+ . .-.++++++.|+...
T Consensus 76 ~~~~~~~~~i~~---l~~~~~~LvG~S~GG~va~~~a~~----~------p~~v~~lvl~~~~~~ 127 (276)
T TIGR02240 76 GLAKLAARMLDY---LDYGQVNAIGVSWGGALAQQFAHD----Y------PERCKKLILAATAAG 127 (276)
T ss_pred HHHHHHHHHHHH---hCcCceEEEEECHHHHHHHHHHHH----C------HHHhhheEEeccCCc
Confidence 344444455443 233579999999999866666643 1 125788888887654
No 56
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=83.60 E-value=2.6 Score=36.50 Aligned_cols=43 Identities=12% Similarity=0.123 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHH
Q 031674 4 TLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQE 47 (155)
Q Consensus 4 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~ 47 (155)
..+|.++..+|+...... .+.-.+++|.|+|.|||-+-.+|.+
T Consensus 97 ~~vg~~la~lI~~L~~~~-gl~l~~VhLIGHSLGAhIAg~ag~~ 139 (442)
T TIGR03230 97 KLVGKDVAKFVNWMQEEF-NYPWDNVHLLGYSLGAHVAGIAGSL 139 (442)
T ss_pred HHHHHHHHHHHHHHHHhh-CCCCCcEEEEEECHHHHHHHHHHHh
Confidence 345666777775444333 3555689999999999977777653
No 57
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=83.16 E-value=2.4 Score=33.01 Aligned_cols=42 Identities=14% Similarity=0.124 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHh
Q 031674 7 ATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISD 50 (155)
Q Consensus 7 a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~ 50 (155)
-.|+..++..|++.+ -++|||.|+|+|=|+..+-.|-+...+
T Consensus 77 y~DV~~AF~~yL~~~--n~GRPfILaGHSQGs~~l~~LL~e~~~ 118 (207)
T PF11288_consen 77 YSDVRAAFDYYLANY--NNGRPFILAGHSQGSMHLLRLLKEEIA 118 (207)
T ss_pred HHHHHHHHHHHHHhc--CCCCCEEEEEeChHHHHHHHHHHHHhc
Confidence 367888888999877 357899999999999877665555443
No 58
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=82.56 E-value=2.6 Score=33.17 Aligned_cols=51 Identities=16% Similarity=0.134 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCC
Q 031674 9 QIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVT 72 (155)
Q Consensus 9 d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~ 72 (155)
++...|..|+... ...+++|.|+|.||..+-.+|.+- .-.++++++-++..
T Consensus 87 ~~a~~l~~~l~~l---~~~~~~lvGhS~Gg~va~~~a~~~----------p~~v~~lili~~~~ 137 (294)
T PLN02824 87 TWGEQLNDFCSDV---VGDPAFVICNSVGGVVGLQAAVDA----------PELVRGVMLINISL 137 (294)
T ss_pred HHHHHHHHHHHHh---cCCCeEEEEeCHHHHHHHHHHHhC----------hhheeEEEEECCCc
Confidence 3344444444433 346899999999998777666542 12468888877654
No 59
>PRK10673 acyl-CoA esterase; Provisional
Probab=82.19 E-value=2.2 Score=32.51 Aligned_cols=49 Identities=14% Similarity=0.089 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecC
Q 031674 4 TLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGN 69 (155)
Q Consensus 4 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGn 69 (155)
.+.++|+..+|..+ ...+++|.|+|.||..+..+|.+- .-.++++++.+
T Consensus 65 ~~~~~d~~~~l~~l-------~~~~~~lvGhS~Gg~va~~~a~~~----------~~~v~~lvli~ 113 (255)
T PRK10673 65 PAMAQDLLDTLDAL-------QIEKATFIGHSMGGKAVMALTALA----------PDRIDKLVAID 113 (255)
T ss_pred HHHHHHHHHHHHHc-------CCCceEEEEECHHHHHHHHHHHhC----------HhhcceEEEEe
Confidence 45567777777542 335799999999999888887642 12467777754
No 60
>PRK00870 haloalkane dehalogenase; Provisional
Probab=82.06 E-value=1.9 Score=34.20 Aligned_cols=51 Identities=12% Similarity=0.203 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCC
Q 031674 8 TQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPV 71 (155)
Q Consensus 8 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~ 71 (155)
++..+.+.++++. +...+++|.|+|+||..+-.+|.+- .=.++++++-++.
T Consensus 99 ~~~a~~l~~~l~~---l~~~~v~lvGhS~Gg~ia~~~a~~~----------p~~v~~lvl~~~~ 149 (302)
T PRK00870 99 ARHVEWMRSWFEQ---LDLTDVTLVCQDWGGLIGLRLAAEH----------PDRFARLVVANTG 149 (302)
T ss_pred HHHHHHHHHHHHH---cCCCCEEEEEEChHHHHHHHHHHhC----------hhheeEEEEeCCC
Confidence 3444555555553 3445899999999999777776531 1236777766653
No 61
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=81.25 E-value=3.4 Score=33.59 Aligned_cols=55 Identities=16% Similarity=0.263 Sum_probs=38.2
Q ss_pred HHHHHHHHHHccc-cCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCChh
Q 031674 11 YHFLRKWLIVHSD-FLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDK 75 (155)
Q Consensus 11 ~~fL~~f~~~fp~-~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~~ 75 (155)
..-|+.|.+..-+ ....|++|+|+|-||--+...+..- .-+++|++|-+|++...
T Consensus 90 ~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~----------~~~i~~~vLssP~~~l~ 145 (298)
T COG2267 90 VDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARY----------PPRIDGLVLSSPALGLG 145 (298)
T ss_pred HHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhC----------CccccEEEEECccccCC
Confidence 3334444443322 4567999999999997666555542 25789999999999887
No 62
>PLN02324 triacylglycerol lipase
Probab=80.61 E-value=5.9 Score=34.01 Aligned_cols=70 Identities=14% Similarity=0.214 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccC-----CCCCccccceeEecCCCCChh
Q 031674 5 LSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDA-----GHKPRMNLKGYMLGNPVTDDK 75 (155)
Q Consensus 5 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~-----~~~~~inLkGi~iGng~~d~~ 75 (155)
++-+++..-+++.+.++|... ..++|+|||-||-.+-..|..|...... .....+++.-+..|.|-+...
T Consensus 194 SareqVl~eV~~L~~~Yp~e~-~sItvTGHSLGGALAtLaA~dl~~~~~n~~~~~~~~~~~~V~v~TFGsPRVGN~ 268 (415)
T PLN02324 194 SAQEQVQGELKRLLELYKNEE-ISITFTGHSLGAVMSVLSAADLVYGKKNKINISLQKKQVPITVFAFGSPRIGDH 268 (415)
T ss_pred HHHHHHHHHHHHHHHHCCCCC-ceEEEecCcHHHHHHHHHHHHHHHhcccccccccccCCCceEEEEecCCCcCCH
Confidence 566788888899888887642 3699999999999988888888763211 011245566777787776653
No 63
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=80.27 E-value=5 Score=32.22 Aligned_cols=63 Identities=17% Similarity=0.117 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHccccC--CCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCChhh
Q 031674 8 TQIYHFLRKWLIVHSDFL--ANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDKI 76 (155)
Q Consensus 8 ~d~~~fL~~f~~~fp~~~--~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~~~ 76 (155)
.|.+..++-....-.++. .+++.++|+|=||+-+-.++....+.. ...+++.++.-+++|...
T Consensus 131 ~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~------~~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 131 EDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRG------LPLPAAQVLISPLLDLTS 195 (312)
T ss_pred HHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcC------CCCceEEEEEecccCCcc
Confidence 344444443333333443 567999999999999999999987752 356788888889988865
No 64
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=79.88 E-value=5.4 Score=31.57 Aligned_cols=52 Identities=13% Similarity=0.072 Sum_probs=33.5
Q ss_pred HHHHHHHH-ccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCChh
Q 031674 13 FLRKWLIV-HSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDK 75 (155)
Q Consensus 13 fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~~ 75 (155)
.|..+... ++ ....+++|+|.|.||..+-.++.+- . =.+++++..+|+.++.
T Consensus 124 ~l~~~~~~~~~-~~~~~~~~~G~S~GG~~a~~~a~~~---p-------~~~~~~~~~~~~~~~~ 176 (275)
T TIGR02821 124 ELPALVAAQFP-LDGERQGITGHSMGGHGALVIALKN---P-------DRFKSVSAFAPIVAPS 176 (275)
T ss_pred HHHHHHHhhCC-CCCCceEEEEEChhHHHHHHHHHhC---c-------ccceEEEEECCccCcc
Confidence 33344443 33 4456799999999998666665431 1 1257888888887764
No 65
>PRK14567 triosephosphate isomerase; Provisional
Probab=79.70 E-value=6.9 Score=31.36 Aligned_cols=61 Identities=18% Similarity=0.268 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCChh
Q 031674 4 TLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDK 75 (155)
Q Consensus 4 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~~ 75 (155)
.+.++++..|+++++..+-+-....+=|. |||.--|.-+..|.+. -++.|+.||.+.+++.
T Consensus 178 ~e~i~~~~~~IR~~l~~~~~~~a~~v~Il---YGGSV~~~N~~~l~~~--------~diDG~LVGgasL~~~ 238 (253)
T PRK14567 178 LEQIQETHQFIRSLLAKVDERLAKNIKIV---YGGSLKAENAKDILSL--------PDVDGGLIGGASLKAA 238 (253)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccceEE---EcCcCCHHHHHHHHcC--------CCCCEEEeehhhhcHH
Confidence 46788899999999986522212233333 9999999999999863 4689999999999875
No 66
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=79.68 E-value=1.9 Score=36.93 Aligned_cols=56 Identities=11% Similarity=-0.008 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCC
Q 031674 8 TQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTD 73 (155)
Q Consensus 8 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d 73 (155)
..++..+-.|+..-|+.-...+-++|-|+||.|++.+|.-= .-.|||++.-.|.++
T Consensus 242 ~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le----------~~RlkavV~~Ga~vh 297 (411)
T PF06500_consen 242 SRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALE----------DPRLKAVVALGAPVH 297 (411)
T ss_dssp CHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHT----------TTT-SEEEEES---S
T ss_pred HHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhc----------ccceeeEeeeCchHh
Confidence 34667778888999999888999999999999999888631 246788665555443
No 67
>PLN02408 phospholipase A1
Probab=79.61 E-value=5.8 Score=33.49 Aligned_cols=65 Identities=14% Similarity=0.154 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCCh
Q 031674 5 LSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDD 74 (155)
Q Consensus 5 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~ 74 (155)
.+.+++..-+++..+++|.. ...++|+|+|-||-.+-..|..|...-.. ...++-+..|.|-+..
T Consensus 179 s~r~qVl~eI~~ll~~y~~~-~~sI~vTGHSLGGALAtLaA~dl~~~~~~----~~~V~v~tFGsPRVGN 243 (365)
T PLN02408 179 SLQEMVREEIARLLQSYGDE-PLSLTITGHSLGAALATLTAYDIKTTFKR----APMVTVISFGGPRVGN 243 (365)
T ss_pred hHHHHHHHHHHHHHHhcCCC-CceEEEeccchHHHHHHHHHHHHHHhcCC----CCceEEEEcCCCCccc
Confidence 45567888888888888875 34699999999999998888888764211 1134566667666654
No 68
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=79.34 E-value=3.8 Score=31.56 Aligned_cols=60 Identities=13% Similarity=0.341 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCC
Q 031674 4 TLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVT 72 (155)
Q Consensus 4 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~ 72 (155)
+++|.|+-..++.+.+ +++.+.+-|.|-|||.=-+|.+..++-..-+ =.++++++-.+-.
T Consensus 48 ~~~a~Dl~~~i~~y~~---~w~~~~vvLiGYSFGADvlP~~~nrLp~~~r------~~v~~v~Ll~p~~ 107 (192)
T PF06057_consen 48 EQTAADLARIIRHYRA---RWGRKRVVLIGYSFGADVLPFIYNRLPAALR------ARVAQVVLLSPST 107 (192)
T ss_pred HHHHHHHHHHHHHHHH---HhCCceEEEEeecCCchhHHHHHhhCCHHHH------hheeEEEEeccCC
Confidence 6889999999998887 5677889999999999999999988866543 3455665554443
No 69
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=78.93 E-value=2.7 Score=33.66 Aligned_cols=52 Identities=12% Similarity=0.022 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCC
Q 031674 9 QIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTD 73 (155)
Q Consensus 9 d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d 73 (155)
++...+..+.+.. ...++.+.|+|+||..+-.+|.+- .-.++++++-+..+.
T Consensus 80 ~~~~dl~~l~~~l---~~~~~~lvG~S~GG~ia~~~a~~~----------p~~v~~lvl~~~~~~ 131 (306)
T TIGR01249 80 DLVADIEKLREKL---GIKNWLVFGGSWGSTLALAYAQTH----------PEVVTGLVLRGIFLL 131 (306)
T ss_pred HHHHHHHHHHHHc---CCCCEEEEEECHHHHHHHHHHHHC----------hHhhhhheeeccccC
Confidence 3444444444433 335799999999998766666542 124577777666553
No 70
>PRK14566 triosephosphate isomerase; Provisional
Probab=78.79 E-value=6.7 Score=31.58 Aligned_cols=61 Identities=21% Similarity=0.398 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCChh
Q 031674 4 TLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDK 75 (155)
Q Consensus 4 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~~ 75 (155)
.+.++++..|+++++.+.-.-....+=|. |||.--|.-+..|.+. .++.|+.||....++.
T Consensus 188 ~e~a~~v~~~IR~~l~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~--------~dIDG~LVGgASL~~~ 248 (260)
T PRK14566 188 PEQAQEVHAFIRKRLSEVSPFIGENIRIL---YGGSVTPSNAADLFAQ--------PDVDGGLIGGASLNST 248 (260)
T ss_pred HHHHHHHHHHHHHHHHhcCccccccceEE---ecCCCCHhHHHHHhcC--------CCCCeEEechHhcCHH
Confidence 45688999999999975411112223333 9999999999999763 5689999999999985
No 71
>PLN02761 lipase class 3 family protein
Probab=78.64 E-value=6.8 Score=34.64 Aligned_cols=71 Identities=7% Similarity=0.111 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHHHHHHcccc---CCCCeEEEeeccCccchhHHHHHHHhcccC---CCCCccccceeEecCCCCChh
Q 031674 5 LSATQIYHFLRKWLIVHSDF---LANPLYIAGDSYSGKIVPIVVQEISDGIDA---GHKPRMNLKGYMLGNPVTDDK 75 (155)
Q Consensus 5 ~~a~d~~~fL~~f~~~fp~~---~~~~~yi~GESYgG~yvP~~a~~i~~~n~~---~~~~~inLkGi~iGng~~d~~ 75 (155)
++.++++..++.....+|.. ....++|+|+|-||-.+-..|..|...+-. .....+++.-+..|.|-+...
T Consensus 269 SaR~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~DIa~~gln~~~~~~~~~PVtv~TFGsPRVGN~ 345 (527)
T PLN02761 269 SAREQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYDIAELNLNHVPENNYKIPITVFSFSGPRVGNL 345 (527)
T ss_pred hHHHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHHHHHhccccccccccCCceEEEEcCCCCcCCH
Confidence 56778889999988888643 223599999999999998888888653211 012345677788887776653
No 72
>PRK04940 hypothetical protein; Provisional
Probab=78.25 E-value=8.5 Score=29.27 Aligned_cols=40 Identities=13% Similarity=0.041 Sum_probs=30.3
Q ss_pred CCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCChhhhhH
Q 031674 27 NPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDKIDQN 79 (155)
Q Consensus 27 ~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~~~~~~ 79 (155)
.++.|.|-|-||.|+-.+|.+- .++.| |-||.+.|.....
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~------------g~~aV-LiNPAv~P~~~L~ 99 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLC------------GIRQV-IFNPNLFPEENME 99 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHH------------CCCEE-EECCCCChHHHHH
Confidence 4799999999999999888863 34444 4589999965443
No 73
>PLN02310 triacylglycerol lipase
Probab=76.99 E-value=6.8 Score=33.56 Aligned_cols=65 Identities=15% Similarity=0.238 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHHHHcccc-CCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCCh
Q 031674 5 LSATQIYHFLRKWLIVHSDF-LANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDD 74 (155)
Q Consensus 5 ~~a~d~~~fL~~f~~~fp~~-~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~ 74 (155)
.+..++...+++....+++- ....++|+|+|-||-.+-..|..|.... +.+++.-+..|.|-+..
T Consensus 186 sa~~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~~~~-----~~~~v~vyTFGsPRVGN 251 (405)
T PLN02310 186 SASEQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAATTI-----PDLFVSVISFGAPRVGN 251 (405)
T ss_pred hHHHHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHHHhC-----cCcceeEEEecCCCccc
Confidence 34566777777777766542 2346999999999998888887775432 23556677778777654
No 74
>PRK11071 esterase YqiA; Provisional
Probab=76.82 E-value=3.7 Score=30.89 Aligned_cols=51 Identities=20% Similarity=0.235 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCChh
Q 031674 9 QIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDK 75 (155)
Q Consensus 9 d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~~ 75 (155)
+..+++.++.+. +...+++|.|.|.||.++-.+|.+. . .+ +++-|+..+|.
T Consensus 46 ~~~~~l~~l~~~---~~~~~~~lvG~S~Gg~~a~~~a~~~----------~--~~-~vl~~~~~~~~ 96 (190)
T PRK11071 46 DAAELLESLVLE---HGGDPLGLVGSSLGGYYATWLSQCF----------M--LP-AVVVNPAVRPF 96 (190)
T ss_pred HHHHHHHHHHHH---cCCCCeEEEEECHHHHHHHHHHHHc----------C--CC-EEEECCCCCHH
Confidence 344555666654 3345899999999999888887753 1 12 35567777764
No 75
>PLN00413 triacylglycerol lipase
Probab=76.59 E-value=3.4 Score=36.08 Aligned_cols=39 Identities=13% Similarity=0.221 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHh
Q 031674 9 QIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISD 50 (155)
Q Consensus 9 d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~ 50 (155)
.+...|++.+.++|++ +++++|+|-||..+-..|..+..
T Consensus 269 ~i~~~Lk~ll~~~p~~---kliVTGHSLGGALAtLaA~~L~~ 307 (479)
T PLN00413 269 TILRHLKEIFDQNPTS---KFILSGHSLGGALAILFTAVLIM 307 (479)
T ss_pred HHHHHHHHHHHHCCCC---eEEEEecCHHHHHHHHHHHHHHh
Confidence 5667788888877755 69999999999998888877654
No 76
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=76.46 E-value=3.7 Score=31.79 Aligned_cols=33 Identities=12% Similarity=0.114 Sum_probs=23.3
Q ss_pred HHHHHHHHHccccCCCCeEEEeeccCccchhHHHHH
Q 031674 12 HFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQE 47 (155)
Q Consensus 12 ~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~ 47 (155)
+.+.+++.. +...++++.|+|+||..+-.+|.+
T Consensus 89 ~~l~~~l~~---l~~~~~~lvG~S~Gg~ia~~~a~~ 121 (282)
T TIGR03343 89 RAVKGLMDA---LDIEKAHLVGNSMGGATALNFALE 121 (282)
T ss_pred HHHHHHHHH---cCCCCeeEEEECchHHHHHHHHHh
Confidence 334444443 344689999999999988877764
No 77
>PLN02802 triacylglycerol lipase
Probab=76.44 E-value=7.1 Score=34.39 Aligned_cols=65 Identities=12% Similarity=0.189 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCCh
Q 031674 5 LSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDD 74 (155)
Q Consensus 5 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~ 74 (155)
.+.+++..-++.+++++|.-. ..++|+|+|-||-..-..|..|...... .+.+.-+..|.|-+..
T Consensus 309 S~reqVl~eV~~Ll~~Y~~e~-~sI~VTGHSLGGALAtLaA~dL~~~~~~----~~pV~vyTFGsPRVGN 373 (509)
T PLN02802 309 SLSESVVGEVRRLMEKYKGEE-LSITVTGHSLGAALALLVADELATCVPA----APPVAVFSFGGPRVGN 373 (509)
T ss_pred hHHHHHHHHHHHHHHhCCCCc-ceEEEeccchHHHHHHHHHHHHHHhCCC----CCceEEEEcCCCCccc
Confidence 345677777888887776432 3699999999999998888888664321 2345566777666554
No 78
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=75.65 E-value=6.8 Score=32.45 Aligned_cols=61 Identities=15% Similarity=0.291 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCChh
Q 031674 9 QIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDK 75 (155)
Q Consensus 9 d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~~ 75 (155)
.+.+-++.-...+| +..++++|+|=||-++...|..|...... ....++-+.-|-|-+...
T Consensus 156 ~~~~~~~~L~~~~~---~~~i~vTGHSLGgAlA~laa~~i~~~~~~---~~~~v~v~tFG~PRvGn~ 216 (336)
T KOG4569|consen 156 GLDAELRRLIELYP---NYSIWVTGHSLGGALASLAALDLVKNGLK---TSSPVKVYTFGQPRVGNL 216 (336)
T ss_pred HHHHHHHHHHHhcC---CcEEEEecCChHHHHHHHHHHHHHHcCCC---CCCceEEEEecCCCcccH
Confidence 34444445555666 56899999999999999999999986643 235667777777766554
No 79
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=74.57 E-value=5.1 Score=32.45 Aligned_cols=35 Identities=11% Similarity=0.127 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHH
Q 031674 10 IYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQE 47 (155)
Q Consensus 10 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~ 47 (155)
+...+..++.. +...+++|.|+|+||..+..+|..
T Consensus 183 ~~~~~~~~~~~---~~~~~~~lvG~S~Gg~~a~~~a~~ 217 (371)
T PRK14875 183 LAAAVLAFLDA---LGIERAHLVGHSMGGAVALRLAAR 217 (371)
T ss_pred HHHHHHHHHHh---cCCccEEEEeechHHHHHHHHHHh
Confidence 33444444443 344579999999999988877765
No 80
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=74.37 E-value=10 Score=30.43 Aligned_cols=60 Identities=15% Similarity=0.210 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCChhhhhHH
Q 031674 7 ATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDKIDQNS 80 (155)
Q Consensus 7 a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~~~~~~~ 80 (155)
.+|+..++ +|++.. ...+++|+|+|.||..+..+|.+. .-.++++++-++.++.......
T Consensus 83 ~~Dv~~ai-~~L~~~---~~~~v~LvG~SmGG~vAl~~A~~~----------p~~v~~lVL~~P~~~g~~~l~~ 142 (266)
T TIGR03101 83 KEDVAAAY-RWLIEQ---GHPPVTLWGLRLGALLALDAANPL----------AAKCNRLVLWQPVVSGKQQLQQ 142 (266)
T ss_pred HHHHHHHH-HHHHhc---CCCCEEEEEECHHHHHHHHHHHhC----------ccccceEEEeccccchHHHHHH
Confidence 34444433 344433 235899999999999887776442 2346888998998887654443
No 81
>PLN02511 hydrolase
Probab=74.04 E-value=11 Score=31.52 Aligned_cols=36 Identities=17% Similarity=0.124 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHH
Q 031674 7 ATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVV 45 (155)
Q Consensus 7 a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a 45 (155)
++|+..+++..-.++| ..++++.|+|.||..+-.++
T Consensus 156 ~~Dl~~~i~~l~~~~~---~~~~~lvG~SlGg~i~~~yl 191 (388)
T PLN02511 156 TGDLRQVVDHVAGRYP---SANLYAAGWSLGANILVNYL 191 (388)
T ss_pred hHHHHHHHHHHHHHCC---CCCEEEEEechhHHHHHHHH
Confidence 5677777766666555 46899999999998654443
No 82
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=72.45 E-value=4.8 Score=33.21 Aligned_cols=39 Identities=13% Similarity=0.374 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHH
Q 031674 7 ATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEI 48 (155)
Q Consensus 7 a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i 48 (155)
+.+.+.-++.|+. ++...+++|.|+||||..+=.+|...
T Consensus 111 ~~~~v~~i~~~~~---~~~~~~~~lvghS~Gg~va~~~Aa~~ 149 (326)
T KOG1454|consen 111 LRELVELIRRFVK---EVFVEPVSLVGHSLGGIVALKAAAYY 149 (326)
T ss_pred hhHHHHHHHHHHH---hhcCcceEEEEeCcHHHHHHHHHHhC
Confidence 4455666666666 45566799999999999888887774
No 83
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=72.25 E-value=5.4 Score=30.13 Aligned_cols=37 Identities=14% Similarity=0.188 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHH
Q 031674 9 QIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQ 46 (155)
Q Consensus 9 d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~ 46 (155)
++..++....+++ .....+++|+|.|.||..+-.++.
T Consensus 78 ~~~~~i~~~~~~~-~id~~~i~l~G~S~Gg~~a~~~a~ 114 (212)
T TIGR01840 78 SLHQLIDAVKANY-SIDPNRVYVTGLSAGGGMTAVLGC 114 (212)
T ss_pred HHHHHHHHHHHhc-CcChhheEEEEECHHHHHHHHHHH
Confidence 3444444444444 234457999999999987655554
No 84
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=72.03 E-value=19 Score=29.06 Aligned_cols=66 Identities=20% Similarity=0.231 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHHHHccc--c-CCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccc--cceeEecCCCCChh
Q 031674 5 LSATQIYHFLRKWLIVHSD--F-LANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMN--LKGYMLGNPVTDDK 75 (155)
Q Consensus 5 ~~a~d~~~fL~~f~~~fp~--~-~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~in--LkGi~iGng~~d~~ 75 (155)
..|..+++.++.-....+. + .+.++.++|.|=||+=. ..|..+.. .- .+.++ |+|.+.|.+..|..
T Consensus 46 ~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa-~~AA~l~~-~Y---ApeL~~~l~Gaa~gg~~~dl~ 116 (290)
T PF03583_consen 46 SEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAA-LWAAELAP-SY---APELNRDLVGAAAGGPPADLA 116 (290)
T ss_pred hHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHH-HHHHHHhH-Hh---CcccccceeEEeccCCccCHH
Confidence 3455566666555554443 2 35689999999998743 33333322 11 25788 99999999888764
No 85
>PF00681 Plectin: Plectin repeat; InterPro: IPR001101 Plectin may have a role in cross-linking intermediate filaments, in inter-linking intermediate filaments with microtubules and microfilaments and in anchoring intermediate filaments to the plasma and nuclear membranes. Plectin is recruited into hemidesmosomes, multiprotein complexes that facilitate adhesion of epithelia to the basement membrane, thereby providing linkage between the intracellular keratin filaments to the laminins of the extracellular matrix. Plectin binds to hemidesmosomes through association of its actin-binding domain with the first pair of fibronectin type III repeats and a small part of the connecting segment of the integrin-beta4 subunit, the latter (integrin-alpha6,beta4) acting as a receptor for the extracellular matrix component laminin-5. The plectin repeat is also seen in the cell adhesion junction plaque proteins, desmoplakin, envoplakin, and bullous pemphigoid antigen. The domains in plakins show considerable sequence homology. The N terminus consists of a plakin domain containing a number of subdomains with high alpha-helical content, while the central coiled-coil domain is composed of heptad repeats involved in the dimerisation of plakin, and the C terminus contains one or more homologous repeat sequences referred to plectin repeats []. This entry represents the plectin repeats found in the C terminus of plakin proteins.; GO: 0005856 cytoskeleton; PDB: 1LM7_A 1LM5_A.
Probab=71.99 E-value=1.5 Score=25.46 Aligned_cols=32 Identities=13% Similarity=0.136 Sum_probs=24.5
Q ss_pred CCCChhhhhHHHHHHhhhccccCHHHHHHHHh
Q 031674 70 PVTDDKIDQNSKIQFAYLNALITYEIYKSAKK 101 (155)
Q Consensus 70 g~~d~~~~~~~~~~~~~~~gli~~~~~~~~~~ 101 (155)
|.+||.+...-..+=|+..|+||.+.+..+.+
T Consensus 12 Giidp~tg~~lsv~~A~~~glId~~~~~~L~e 43 (45)
T PF00681_consen 12 GIIDPETGERLSVEEAIQRGLIDSDTAQKLLE 43 (45)
T ss_dssp SEEETTTTEEEEHHHHHHTTSS-HHHHHHHHH
T ss_pred eEEeCCCCeEEcHHHHHHCCCcCHHHHHHHHc
Confidence 78888876665667788999999999887754
No 86
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=71.97 E-value=8.3 Score=33.32 Aligned_cols=38 Identities=13% Similarity=0.080 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHH
Q 031674 6 SATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQ 46 (155)
Q Consensus 6 ~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~ 46 (155)
..+++...++..++. ...+++.|.|+|-||-.+=.++.
T Consensus 144 ~~~~Lk~lIe~~~~~---~g~~kV~LVGHSMGGlva~~fl~ 181 (440)
T PLN02733 144 TMDGLKKKLETVYKA---SGGKKVNIISHSMGGLLVKCFMS 181 (440)
T ss_pred HHHHHHHHHHHHHHH---cCCCCEEEEEECHhHHHHHHHHH
Confidence 345666666666654 44578999999999976665543
No 87
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=71.80 E-value=3.2 Score=30.51 Aligned_cols=21 Identities=19% Similarity=0.240 Sum_probs=17.5
Q ss_pred CCeEEEeeccCccchhHHHHH
Q 031674 27 NPLYIAGDSYSGKIVPIVVQE 47 (155)
Q Consensus 27 ~~~yi~GESYgG~yvP~~a~~ 47 (155)
.++++.|+|+||..+..+|.+
T Consensus 65 ~~~~lvG~S~Gg~~a~~~a~~ 85 (245)
T TIGR01738 65 DPAIWLGWSLGGLVALHIAAT 85 (245)
T ss_pred CCeEEEEEcHHHHHHHHHHHH
Confidence 589999999999887777653
No 88
>PLN02934 triacylglycerol lipase
Probab=71.79 E-value=13 Score=32.77 Aligned_cols=62 Identities=16% Similarity=0.231 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCCh
Q 031674 9 QIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDD 74 (155)
Q Consensus 9 d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~ 74 (155)
.+...|+++++++|.+ +++++|+|-||-.+-..|..+....+... ....++-+..|.|-+..
T Consensus 306 ~v~~~lk~ll~~~p~~---kIvVTGHSLGGALAtLaA~~L~l~~~~~~-l~~~~~vYTFGsPRVGN 367 (515)
T PLN02934 306 AVRSKLKSLLKEHKNA---KFVVTGHSLGGALAILFPTVLVLQEETEV-MKRLLGVYTFGQPRIGN 367 (515)
T ss_pred HHHHHHHHHHHHCCCC---eEEEeccccHHHHHHHHHHHHHHhccccc-ccCceEEEEeCCCCccC
Confidence 4777788888888875 69999999999988888777654332110 11123345666666544
No 89
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=71.48 E-value=9.5 Score=28.85 Aligned_cols=41 Identities=24% Similarity=0.348 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHH
Q 031674 5 LSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQE 47 (155)
Q Consensus 5 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~ 47 (155)
..|.+|..|+...=..+ =..-.+-+.|+|||..-+-..++.
T Consensus 89 ~ga~~L~~f~~gl~a~~--~~~~~~tv~GHSYGS~v~G~A~~~ 129 (177)
T PF06259_consen 89 AGAPRLARFLDGLRATH--GPDAHLTVVGHSYGSTVVGLAAQQ 129 (177)
T ss_pred HHHHHHHHHHHHhhhhc--CCCCCEEEEEecchhHHHHHHhhh
Confidence 45667777777765555 112368999999999866655554
No 90
>PLN02162 triacylglycerol lipase
Probab=70.43 E-value=7 Score=34.13 Aligned_cols=61 Identities=20% Similarity=0.281 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCcccc-ceeEecCCCCCh
Q 031674 9 QIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNL-KGYMLGNPVTDD 74 (155)
Q Consensus 9 d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inL-kGi~iGng~~d~ 74 (155)
.+..-|+..+.++|.+ +++++|||-||-.+-..|..+....... ..-.+ +-+..|.|-+..
T Consensus 263 ~I~~~L~~lL~k~p~~---kliVTGHSLGGALAtLaAa~L~~~~~~~--l~~~~~~vYTFGqPRVGn 324 (475)
T PLN02162 263 TIRQMLRDKLARNKNL---KYILTGHSLGGALAALFPAILAIHGEDE--LLDKLEGIYTFGQPRVGD 324 (475)
T ss_pred HHHHHHHHHHHhCCCc---eEEEEecChHHHHHHHHHHHHHHccccc--cccccceEEEeCCCCccC
Confidence 4555667777777754 6999999999998877776665432210 00112 235666666654
No 91
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=69.87 E-value=4.5 Score=33.50 Aligned_cols=46 Identities=13% Similarity=0.177 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHh
Q 031674 4 TLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISD 50 (155)
Q Consensus 4 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~ 50 (155)
..+++.+-.||+.....+ .+....+||.|+|-|+|-+=.+++++..
T Consensus 128 ~~vg~~la~~l~~L~~~~-g~~~~~ihlIGhSLGAHvaG~aG~~~~~ 173 (331)
T PF00151_consen 128 RLVGRQLAKFLSFLINNF-GVPPENIHLIGHSLGAHVAGFAGKYLKG 173 (331)
T ss_dssp HHHHHHHHHHHHHHHHHH----GGGEEEEEETCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHhhc-CCChhHEEEEeeccchhhhhhhhhhccC
Confidence 345666666766666443 3445679999999999999988888876
No 92
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=69.75 E-value=11 Score=29.37 Aligned_cols=40 Identities=18% Similarity=0.340 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHh
Q 031674 7 ATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISD 50 (155)
Q Consensus 7 a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~ 50 (155)
.+....+++.....+|. +++++|||=||..+-+.|..+.+
T Consensus 68 q~~A~~yl~~~~~~~~~----~i~v~GHSkGGnLA~yaa~~~~~ 107 (224)
T PF11187_consen 68 QKSALAYLKKIAKKYPG----KIYVTGHSKGGNLAQYAAANCDD 107 (224)
T ss_pred HHHHHHHHHHHHHhCCC----CEEEEEechhhHHHHHHHHHccH
Confidence 34556677777776655 69999999999988877777544
No 93
>PLN02847 triacylglycerol lipase
Probab=69.52 E-value=12 Score=33.87 Aligned_cols=50 Identities=18% Similarity=0.137 Sum_probs=32.0
Q ss_pred HHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecC
Q 031674 12 HFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGN 69 (155)
Q Consensus 12 ~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGn 69 (155)
..|++-+..+|.| ++.|+|+|.||--+..++..+ +.+.. ..+++-++.|-
T Consensus 239 ~~L~kal~~~PdY---kLVITGHSLGGGVAALLAilL-Re~~~----fssi~CyAFgP 288 (633)
T PLN02847 239 PCLLKALDEYPDF---KIKIVGHSLGGGTAALLTYIL-REQKE----FSSTTCVTFAP 288 (633)
T ss_pred HHHHHHHHHCCCC---eEEEeccChHHHHHHHHHHHH-hcCCC----CCCceEEEecC
Confidence 3444455567665 699999999999777776555 43321 34456666664
No 94
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=68.59 E-value=15 Score=31.48 Aligned_cols=55 Identities=16% Similarity=0.224 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCC
Q 031674 8 TQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVT 72 (155)
Q Consensus 8 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~ 72 (155)
.|+-++++---.+||+ .+++.+|.|+||. .+..++-+..++ ..=..|++|-|||=
T Consensus 182 ~Dl~~~v~~i~~~~P~---a~l~avG~S~Gg~---iL~nYLGE~g~~----~~l~~a~~v~~Pwd 236 (409)
T KOG1838|consen 182 EDLREVVNHIKKRYPQ---APLFAVGFSMGGN---ILTNYLGEEGDN----TPLIAAVAVCNPWD 236 (409)
T ss_pred HHHHHHHHHHHHhCCC---CceEEEEecchHH---HHHHHhhhccCC----CCceeEEEEeccch
Confidence 4666666665666775 4899999999997 456777665432 23468899999984
No 95
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=68.35 E-value=15 Score=28.68 Aligned_cols=60 Identities=18% Similarity=0.289 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCC
Q 031674 4 TLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPV 71 (155)
Q Consensus 4 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~ 71 (155)
.+.++.+...+..+.. ..+++.|+|.|-|+.-+-...+++.+.... ..=+|+.+++||+.
T Consensus 30 ~~G~~~L~~ai~~~~~-----~~~~vvV~GySQGA~Va~~~~~~l~~~~~~---~~~~l~fVl~gnP~ 89 (225)
T PF08237_consen 30 AEGVANLDAAIRAAIA-----AGGPVVVFGYSQGAVVASNVLRRLAADGDP---PPDDLSFVLIGNPR 89 (225)
T ss_pred HHHHHHHHHHHHhhcc-----CCCCEEEEEECHHHHHHHHHHHHHHhcCCC---CcCceEEEEecCCC
Confidence 3445566666666554 678899999999998888888887774321 12478899999885
No 96
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=67.92 E-value=6.6 Score=26.93 Aligned_cols=37 Identities=19% Similarity=0.292 Sum_probs=28.0
Q ss_pred CCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCC
Q 031674 25 LANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVT 72 (155)
Q Consensus 25 ~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~ 72 (155)
...+++++|.|.||..+..++.+ ...+++++.-.|+.
T Consensus 59 ~~~~i~l~G~S~Gg~~a~~~~~~-----------~~~v~~~v~~~~~~ 95 (145)
T PF12695_consen 59 DPDRIILIGHSMGGAIAANLAAR-----------NPRVKAVVLLSPYP 95 (145)
T ss_dssp TCCEEEEEEETHHHHHHHHHHHH-----------STTESEEEEESESS
T ss_pred CCCcEEEEEEccCcHHHHHHhhh-----------ccceeEEEEecCcc
Confidence 55789999999999987777762 14567888777753
No 97
>PLN03037 lipase class 3 family protein; Provisional
Probab=67.79 E-value=15 Score=32.48 Aligned_cols=66 Identities=18% Similarity=0.251 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHHHHcccc-CCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCChh
Q 031674 6 SATQIYHFLRKWLIVHSDF-LANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDK 75 (155)
Q Consensus 6 ~a~d~~~fL~~f~~~fp~~-~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~~ 75 (155)
+.+++..-+++....+|+. ....++|+|+|-||-.+-..|..|...... ..++.-+..|.|-+...
T Consensus 296 areQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DIa~~~p~----~~~VtvyTFGsPRVGN~ 362 (525)
T PLN03037 296 ASEQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEAARSVPA----LSNISVISFGAPRVGNL 362 (525)
T ss_pred hHHHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHHHHhCCC----CCCeeEEEecCCCccCH
Confidence 3456777777777777753 344699999999999988888777654321 11445566676655543
No 98
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=67.64 E-value=9.2 Score=31.13 Aligned_cols=52 Identities=13% Similarity=0.056 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCC
Q 031674 5 LSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVT 72 (155)
Q Consensus 5 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~ 72 (155)
..|+++..+|+. . .. .+.+.+.|.|+||..+-.+|.+- .=.++++++.++..
T Consensus 122 ~~a~dl~~ll~~----l-~l-~~~~~lvG~SmGG~vA~~~A~~~----------P~~V~~LvLi~s~~ 173 (343)
T PRK08775 122 DQADAIALLLDA----L-GI-ARLHAFVGYSYGALVGLQFASRH----------PARVRTLVVVSGAH 173 (343)
T ss_pred HHHHHHHHHHHH----c-CC-CcceEEEEECHHHHHHHHHHHHC----------hHhhheEEEECccc
Confidence 345555555533 1 12 23467999999998776666542 12467888877654
No 99
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=67.06 E-value=14 Score=29.76 Aligned_cols=63 Identities=25% Similarity=0.363 Sum_probs=35.7
Q ss_pred hHHHHHHHHHHHHHHHHH-c-----cccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCC
Q 031674 3 DTLSATQIYHFLRKWLIV-H-----SDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVT 72 (155)
Q Consensus 3 d~~~a~d~~~fL~~f~~~-f-----p~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~ 72 (155)
+.+.+..+.+||.+=+.. . |++ ..+.|+|||=||+-+-.++....+. ...++++++++-+|.=
T Consensus 63 ~~~~~~~vi~Wl~~~L~~~l~~~v~~D~--s~l~l~GHSrGGk~Af~~al~~~~~-----~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 63 EVASAAEVIDWLAKGLESKLPLGVKPDF--SKLALAGHSRGGKVAFAMALGNASS-----SLDLRFSALILLDPVD 131 (259)
T ss_pred hHHHHHHHHHHHHhcchhhccccccccc--cceEEeeeCCCCHHHHHHHhhhccc-----ccccceeEEEEecccc
Confidence 445566666666552222 2 233 2599999999999554444433211 1245667777665553
No 100
>PRK10349 carboxylesterase BioH; Provisional
Probab=67.01 E-value=6.7 Score=30.04 Aligned_cols=35 Identities=9% Similarity=0.056 Sum_probs=25.2
Q ss_pred CCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCC
Q 031674 26 ANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNP 70 (155)
Q Consensus 26 ~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng 70 (155)
..++++.|+|.||.-+..+|.. . .-.++++++-|+
T Consensus 73 ~~~~~lvGhS~Gg~ia~~~a~~---~-------p~~v~~lili~~ 107 (256)
T PRK10349 73 PDKAIWLGWSLGGLVASQIALT---H-------PERVQALVTVAS 107 (256)
T ss_pred CCCeEEEEECHHHHHHHHHHHh---C-------hHhhheEEEecC
Confidence 3579999999999977777653 1 234677777665
No 101
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=66.39 E-value=9.6 Score=31.41 Aligned_cols=37 Identities=24% Similarity=0.299 Sum_probs=23.2
Q ss_pred CCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCC
Q 031674 26 ANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPV 71 (155)
Q Consensus 26 ~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~ 71 (155)
..+++|.|+|.||..+-.+|.. .. .=.++|+++-|+.
T Consensus 154 ~~~~~lvGhS~Gg~ia~~~a~~--~~-------P~rV~~LVLi~~~ 190 (360)
T PLN02679 154 QKPTVLIGNSVGSLACVIAASE--ST-------RDLVRGLVLLNCA 190 (360)
T ss_pred CCCeEEEEECHHHHHHHHHHHh--cC-------hhhcCEEEEECCc
Confidence 4589999999999654333321 11 1246788877754
No 102
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=66.32 E-value=16 Score=29.05 Aligned_cols=63 Identities=14% Similarity=0.199 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCCh
Q 031674 4 TLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDD 74 (155)
Q Consensus 4 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~ 74 (155)
++..++-.+|++++....+ ....+++|.|+|=|.. ++.+|+++... ...+++++.+-=|.+..
T Consensus 62 ~~QI~hk~~~i~~~~~~~~-~~~~~liLiGHSIGay----i~levl~r~~~---~~~~V~~~~lLfPTi~~ 124 (266)
T PF10230_consen 62 QDQIEHKIDFIKELIPQKN-KPNVKLILIGHSIGAY----IALEVLKRLPD---LKFRVKKVILLFPTIED 124 (266)
T ss_pred HHHHHHHHHHHHHHhhhhc-CCCCcEEEEeCcHHHH----HHHHHHHhccc---cCCceeEEEEeCCcccc
Confidence 4566777888888887665 2456899999999875 55666665431 24566666555455433
No 103
>PRK10985 putative hydrolase; Provisional
Probab=65.81 E-value=28 Score=28.15 Aligned_cols=35 Identities=20% Similarity=0.243 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHH
Q 031674 8 TQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVV 45 (155)
Q Consensus 8 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a 45 (155)
.|+..+++.--+++| ..+++++|+|.||..+-.++
T Consensus 115 ~D~~~~i~~l~~~~~---~~~~~~vG~S~GG~i~~~~~ 149 (324)
T PRK10985 115 EDARFFLRWLQREFG---HVPTAAVGYSLGGNMLACLL 149 (324)
T ss_pred HHHHHHHHHHHHhCC---CCCEEEEEecchHHHHHHHH
Confidence 454444433333343 45799999999997644333
No 104
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=63.89 E-value=13 Score=30.45 Aligned_cols=36 Identities=14% Similarity=0.157 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHHHHHHccccCCCCeEEEeeccCcc
Q 031674 4 TLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGK 39 (155)
Q Consensus 4 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~ 39 (155)
.++|+.+.+.+......-|+=..-++|+.|||-|..
T Consensus 86 ~~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~ 121 (289)
T PF10081_consen 86 REAARALFEAVYARWSTLPEDRRPKLYLYGESLGAY 121 (289)
T ss_pred HHHHHHHHHHHHHHHHhCCcccCCeEEEeccCcccc
Confidence 467788888998888888888665699999998764
No 105
>PLN02429 triosephosphate isomerase
Probab=63.35 E-value=24 Score=29.28 Aligned_cols=61 Identities=20% Similarity=0.342 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHHHHHH-ccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCChh
Q 031674 4 TLSATQIYHFLRKWLIV-HSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDK 75 (155)
Q Consensus 4 ~~~a~d~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~~ 75 (155)
.+.++.+..++++|+.. +.+-....+-|. |||---|.-+..|.. ..++.|+.||.+.+++.
T Consensus 238 ~e~~~~v~~~IR~~l~~~~~~~va~~irIL---YGGSV~~~N~~el~~--------~~diDG~LVGgASL~~~ 299 (315)
T PLN02429 238 PQQAQEVHVAVRGWLKKNVSEEVASKTRII---YGGSVNGGNSAELAK--------EEDIDGFLVGGASLKGP 299 (315)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhccCceEE---EcCccCHHHHHHHhc--------CCCCCEEEeecceecHH
Confidence 46678889999999875 433222344444 999999999998875 45789999999999875
No 106
>PF04414 tRNA_deacylase: D-aminoacyl-tRNA deacylase; InterPro: IPR007508 D-aminoacyl-tRNA deacylases hydrolyse the ester bond between the polynucleotide and the D-amino acid, thereby preventing the accumulation of such mis-acylated and metabolically inactive tRNA molecules. Several aminoacyl-tRNA synthetases have the ability to transfer the D-isomer of their amino acid onto their cognate tRNA. ; GO: 0016788 hydrolase activity, acting on ester bonds; PDB: 1YQE_A 2GFQ_B.
Probab=63.32 E-value=18 Score=28.26 Aligned_cols=48 Identities=15% Similarity=0.043 Sum_probs=32.9
Q ss_pred CChHHHHHHHHHHHHHHHHHccccC-CCCeEEEeeccCccchhHHHHHHHhc
Q 031674 1 MNDTLSATQIYHFLRKWLIVHSDFL-ANPLYIAGDSYSGKIVPIVVQEISDG 51 (155)
Q Consensus 1 ~~d~~~a~d~~~fL~~f~~~fp~~~-~~~~yi~GESYgG~yvP~~a~~i~~~ 51 (155)
++|..+++-+...+.+.+..-++-. ..++.-+| ||||.|.+...+++.
T Consensus 104 W~d~~a~~~vA~avl~~~~~~~~~~~~~~~ig~G---G~HYapr~t~~~l~~ 152 (213)
T PF04414_consen 104 WNDPDAAEAVARAVLEVLESDEKAECCPVAIGFG---GGHYAPRFTKLALET 152 (213)
T ss_dssp HT-HHHHHHHHHHHHHHHHHTTCSTT-EEEEEE----S-TT-HHHHHHHHHC
T ss_pred hCChHHHHHHHHHHHHHhcccccccccceeEEec---CcccchhhhhhhhcC
Confidence 3678888888889988888765443 24566667 899999999988874
No 107
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=63.14 E-value=12 Score=30.88 Aligned_cols=54 Identities=13% Similarity=0.161 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCC
Q 031674 4 TLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNP 70 (155)
Q Consensus 4 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng 70 (155)
+..++|+...++.+|.. .- .++.|.|+|-||-...+.|.. ....+|-|+.+-+=
T Consensus 127 eT~~KD~~~~i~~~fge---~~-~~iilVGHSmGGaIav~~a~~---------k~lpsl~Gl~viDV 180 (343)
T KOG2564|consen 127 ETMSKDFGAVIKELFGE---LP-PQIILVGHSMGGAIAVHTAAS---------KTLPSLAGLVVIDV 180 (343)
T ss_pred HHHHHHHHHHHHHHhcc---CC-CceEEEeccccchhhhhhhhh---------hhchhhhceEEEEE
Confidence 45678888888888753 32 259999999999876544432 12456888877643
No 108
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=62.95 E-value=6.5 Score=30.21 Aligned_cols=35 Identities=17% Similarity=0.331 Sum_probs=29.3
Q ss_pred HHHHHHccccCCCCeEEEeeccCccchhHHHHHHH
Q 031674 15 RKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEIS 49 (155)
Q Consensus 15 ~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~ 49 (155)
-+|++.+|+-....+=|.|-|.||-.+-.+|.+.-
T Consensus 10 i~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~ 44 (213)
T PF08840_consen 10 IDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP 44 (213)
T ss_dssp HHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS
T ss_pred HHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC
Confidence 46889999999889999999999999988888763
No 109
>PLN02561 triosephosphate isomerase
Probab=62.90 E-value=22 Score=28.45 Aligned_cols=60 Identities=23% Similarity=0.408 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHHHHHH-ccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCCh
Q 031674 4 TLSATQIYHFLRKWLIV-HSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDD 74 (155)
Q Consensus 4 ~~~a~d~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~ 74 (155)
.+.++.+..+++.++.+ +..-....+-|. |||.--|.-+..|.. ..++.|+.||.+.+|+
T Consensus 179 ~~~~~~v~~~Ir~~l~~~~~~~~a~~i~IL---YGGSV~~~N~~~l~~--------~~~iDG~LVG~ASL~~ 239 (253)
T PLN02561 179 PAQAQEVHDELRKWLHKNVSPEVAATTRII---YGGSVTGANCKELAA--------QPDVDGFLVGGASLKP 239 (253)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccceEE---EeCCcCHHHHHHHhc--------CCCCCeEEEehHhhHH
Confidence 45678889999998864 433323344454 999999999999875 4678999999999997
No 110
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=62.39 E-value=15 Score=28.23 Aligned_cols=47 Identities=11% Similarity=0.096 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcc
Q 031674 5 LSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGI 52 (155)
Q Consensus 5 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n 52 (155)
..|+.+.+.|.+.....+.- .+++.+.|+|-||.++=.....+.+..
T Consensus 57 ~~g~rL~~eI~~~~~~~~~~-~~~IsfIgHSLGGli~r~al~~~~~~~ 103 (217)
T PF05057_consen 57 VCGERLAEEILEHIKDYESK-IRKISFIGHSLGGLIARYALGLLHDKP 103 (217)
T ss_pred HHHHHHHHHHHHhccccccc-cccceEEEecccHHHHHHHHHHhhhcc
Confidence 35667777777777665444 468999999999998876666666544
No 111
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=60.42 E-value=24 Score=29.53 Aligned_cols=54 Identities=20% Similarity=0.253 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCC
Q 031674 8 TQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPV 71 (155)
Q Consensus 8 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~ 71 (155)
.|+..||..-..+|| .+++|.+|-|.||. .+|.++.++-+ . ...-.++++-+|+
T Consensus 132 ~D~~~~l~~l~~~~~---~r~~~avG~SLGgn---mLa~ylgeeg~---d-~~~~aa~~vs~P~ 185 (345)
T COG0429 132 EDIRFFLDWLKARFP---PRPLYAVGFSLGGN---MLANYLGEEGD---D-LPLDAAVAVSAPF 185 (345)
T ss_pred hHHHHHHHHHHHhCC---CCceEEEEecccHH---HHHHHHHhhcc---C-cccceeeeeeCHH
Confidence 455555554444454 57999999999995 45667666432 1 2335666666655
No 112
>PTZ00333 triosephosphate isomerase; Provisional
Probab=59.70 E-value=26 Score=28.04 Aligned_cols=60 Identities=22% Similarity=0.430 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHHHHHH-ccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCCh
Q 031674 4 TLSATQIYHFLRKWLIV-HSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDD 74 (155)
Q Consensus 4 ~~~a~d~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~ 74 (155)
.+.++++..++++++.. +..-....+-|. |||.--|.-+..|.. ..++.|+.||.+.+++
T Consensus 182 ~e~i~~~~~~IR~~l~~~~~~~~~~~~~IL---YGGSV~~~N~~~l~~--------~~~vDG~LvG~asl~~ 242 (255)
T PTZ00333 182 PEQAQEVHAFIRKWLAEKVGADVAEATRII---YGGSVNEKNCKELIK--------QPDIDGFLVGGASLKP 242 (255)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccceEE---EcCCCCHHHHHHHhc--------CCCCCEEEEehHhhhh
Confidence 46788899999999874 433223334444 999999999999875 4578999999999874
No 113
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=58.88 E-value=12 Score=28.31 Aligned_cols=75 Identities=8% Similarity=0.037 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHHHcc--ccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCChhhhhH----
Q 031674 6 SATQIYHFLRKWLIVHS--DFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDKIDQN---- 79 (155)
Q Consensus 6 ~a~d~~~fL~~f~~~fp--~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~~~~~~---- 79 (155)
...+....|.+|...-. ....++++|.|-|=||...-.++.+- .-.|.|++.-.|++-+..+..
T Consensus 82 ~i~~s~~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~----------p~~~~gvv~lsG~~~~~~~~~~~~~ 151 (216)
T PF02230_consen 82 GIEESAERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRY----------PEPLAGVVALSGYLPPESELEDRPE 151 (216)
T ss_dssp HHHHHHHHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCT----------SSTSSEEEEES---TTGCCCHCCHC
T ss_pred HHHHHHHHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHc----------CcCcCEEEEeecccccccccccccc
Confidence 33444444444444311 14556899999999998776666431 237889988888875543221
Q ss_pred --HHHHHhhhccc
Q 031674 80 --SKIQFAYLNAL 90 (155)
Q Consensus 80 --~~~~~~~~~gl 90 (155)
...+.+..||-
T Consensus 152 ~~~~~pi~~~hG~ 164 (216)
T PF02230_consen 152 ALAKTPILIIHGD 164 (216)
T ss_dssp CCCTS-EEEEEET
T ss_pred ccCCCcEEEEecC
Confidence 13355666764
No 114
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=58.43 E-value=14 Score=30.22 Aligned_cols=52 Identities=8% Similarity=-0.066 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHccccCCCC-eEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCC
Q 031674 8 TQIYHFLRKWLIVHSDFLANP-LYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVT 72 (155)
Q Consensus 8 ~d~~~fL~~f~~~fp~~~~~~-~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~ 72 (155)
+++...+..+++.. .-.+ ++|+|+|.||..+-.+|..- .-.++++++-++..
T Consensus 110 ~~~~~~~~~~~~~l---~~~~~~~l~G~S~Gg~ia~~~a~~~----------p~~v~~lvl~~~~~ 162 (351)
T TIGR01392 110 RDDVKAQKLLLDHL---GIEQIAAVVGGSMGGMQALEWAIDY----------PERVRAIVVLATSA 162 (351)
T ss_pred HHHHHHHHHHHHHc---CCCCceEEEEECHHHHHHHHHHHHC----------hHhhheEEEEccCC
Confidence 45555555666543 3345 99999999998776666541 23467777776654
No 115
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=58.11 E-value=7.7 Score=32.72 Aligned_cols=37 Identities=19% Similarity=0.240 Sum_probs=22.0
Q ss_pred CeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCChh
Q 031674 28 PLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDK 75 (155)
Q Consensus 28 ~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~~ 75 (155)
.+-++|+||||--+-..+. +. ..+|..++-+||.-|.
T Consensus 229 ~i~~~GHSFGGATa~~~l~---~d--------~r~~~~I~LD~W~~Pl 265 (379)
T PF03403_consen 229 RIGLAGHSFGGATALQALR---QD--------TRFKAGILLDPWMFPL 265 (379)
T ss_dssp EEEEEEETHHHHHHHHHHH---H---------TT--EEEEES---TTS
T ss_pred heeeeecCchHHHHHHHHh---hc--------cCcceEEEeCCcccCC
Confidence 5889999999965443332 21 3467788889998875
No 116
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=57.79 E-value=8.1 Score=30.83 Aligned_cols=29 Identities=17% Similarity=0.301 Sum_probs=25.3
Q ss_pred ccCCCCeEEEeeccCccchhHHHHHHHhc
Q 031674 23 DFLANPLYIAGDSYSGKIVPIVVQEISDG 51 (155)
Q Consensus 23 ~~~~~~~yi~GESYgG~yvP~~a~~i~~~ 51 (155)
-+..+|+-++|+|.||+-.=.+|+++-+.
T Consensus 70 ~~~d~P~alfGHSmGa~lAfEvArrl~~~ 98 (244)
T COG3208 70 PLLDAPFALFGHSMGAMLAFEVARRLERA 98 (244)
T ss_pred ccCCCCeeecccchhHHHHHHHHHHHHHc
Confidence 46678999999999999999999998764
No 117
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=57.69 E-value=11 Score=29.75 Aligned_cols=59 Identities=17% Similarity=0.113 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCChhh
Q 031674 6 SATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDKI 76 (155)
Q Consensus 6 ~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~~~ 76 (155)
-++|.++.+ +|+...|--.. .+-++|.||+|.....+|.. ....||.|+..-++.|...
T Consensus 82 e~~D~~d~I-~W~~~Qpws~G-~VGm~G~SY~G~~q~~~A~~----------~~p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 82 EAQDGYDTI-EWIAAQPWSNG-KVGMYGISYGGFTQWAAAAR----------RPPHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp HHHHHHHHH-HHHHHCTTEEE-EEEEEEETHHHHHHHHHHTT----------T-TTEEEEEEESE-SBTCC
T ss_pred HHHHHHHHH-HHHHhCCCCCC-eEEeeccCHHHHHHHHHHhc----------CCCCceEEEecccCCcccc
Confidence 445555544 56666654444 69999999999987777661 2567899999888877643
No 118
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=56.94 E-value=32 Score=28.99 Aligned_cols=63 Identities=10% Similarity=0.127 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCCh
Q 031674 9 QIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDD 74 (155)
Q Consensus 9 d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~ 74 (155)
++..-|+...+.-=+..++++.|.|||.||-++-.+-+...... =....|. +=|.||-|+...
T Consensus 101 ~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~fl~~~~~~~--W~~~~i~-~~i~i~~p~~Gs 163 (389)
T PF02450_consen 101 EYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYFLQWMPQEE--WKDKYIK-RFISIGTPFGGS 163 (389)
T ss_pred HHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHHHHhccchh--hHHhhhh-EEEEeCCCCCCC
Confidence 34444555544322233779999999999987766555553220 0001233 455666666543
No 119
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=56.50 E-value=24 Score=28.84 Aligned_cols=52 Identities=10% Similarity=-0.079 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCCh
Q 031674 10 IYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDD 74 (155)
Q Consensus 10 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~ 74 (155)
+-.++....++. ...++++.|+|.||..+-.++.. .. -.++++++-++.++.
T Consensus 122 ~~~~v~~l~~~~---~~~~i~lvGhS~GG~i~~~~~~~---~~-------~~v~~lv~~~~p~~~ 173 (350)
T TIGR01836 122 IDKCVDYICRTS---KLDQISLLGICQGGTFSLCYAAL---YP-------DKIKNLVTMVTPVDF 173 (350)
T ss_pred HHHHHHHHHHHh---CCCcccEEEECHHHHHHHHHHHh---Cc-------hheeeEEEecccccc
Confidence 444444444433 34589999999999866554432 11 125666666665553
No 120
>PRK14565 triosephosphate isomerase; Provisional
Probab=56.08 E-value=34 Score=27.11 Aligned_cols=54 Identities=15% Similarity=0.306 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCChhh
Q 031674 4 TLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDKI 76 (155)
Q Consensus 4 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~~~ 76 (155)
.+.++.+..+++++. ..+-|. |||.--|.-+..+.+ ..++.|+.||.+.+++..
T Consensus 173 ~e~i~~~~~~Ir~~~--------~~~~Il---YGGSV~~~N~~~l~~--------~~~iDG~LvG~asl~~~~ 226 (237)
T PRK14565 173 NDAIAEAFEIIRSYD--------SKSHII---YGGSVNQENIRDLKS--------INQLSGVLVGSASLDVDS 226 (237)
T ss_pred HHHHHHHHHHHHHhC--------CCceEE---EcCccCHhhHHHHhc--------CCCCCEEEEechhhcHHH
Confidence 456777888888762 123333 999999999999876 346899999999998754
No 121
>PRK15492 triosephosphate isomerase; Provisional
Probab=55.51 E-value=44 Score=26.85 Aligned_cols=61 Identities=16% Similarity=0.264 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHHHHHH-ccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCChhh
Q 031674 4 TLSATQIYHFLRKWLIV-HSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDKI 76 (155)
Q Consensus 4 ~~~a~d~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~~~ 76 (155)
.+.+++...++++++.. +-+- ...+-|. |||---|.-+..|.. ..++.|+.||....++..
T Consensus 188 ~e~~~~~~~~Ir~~l~~~~~~~-~~~irIL---YGGSV~~~N~~~l~~--------~~diDG~LvG~aSl~~~~ 249 (260)
T PRK15492 188 ADYADEKHAVIKQCLIELFGDA-GDDIPVF---YGGSVNAENANELFG--------QPHIDGLFIGRSAWDADK 249 (260)
T ss_pred HHHHHHHHHHHHHHHHHHhccc-cCceeEE---EcCccCHHHHHHHhc--------CCCCCEEEeehhhcCHHH
Confidence 35567889999999753 4222 2344455 999999999999976 357899999999999853
No 122
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=55.09 E-value=22 Score=32.92 Aligned_cols=41 Identities=15% Similarity=0.210 Sum_probs=29.8
Q ss_pred cCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCCh
Q 031674 24 FLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDD 74 (155)
Q Consensus 24 ~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~ 74 (155)
+.+-.+-++|.||+|...-.+|.. ..-.||.|+-..|+.+.
T Consensus 335 WsnGkVGm~G~SY~G~~~~~aAa~----------~pp~LkAIVp~a~is~~ 375 (767)
T PRK05371 335 WSNGKVAMTGKSYLGTLPNAVATT----------GVEGLETIIPEAAISSW 375 (767)
T ss_pred CCCCeeEEEEEcHHHHHHHHHHhh----------CCCcceEEEeeCCCCcH
Confidence 345589999999999876655542 13568888887777664
No 123
>cd00311 TIM Triosephosphate isomerase (TIM) is a glycolytic enzyme that catalyzes the interconversion of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate. The reaction is very efficient and requires neither cofactors nor metal ions. TIM, usually homodimeric, but in some organisms tetrameric, is ubiqitous and conserved in function across eukaryotes, bacteria and archaea.
Probab=54.87 E-value=49 Score=26.22 Aligned_cols=60 Identities=22% Similarity=0.386 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHHHHH-ccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCChh
Q 031674 4 TLSATQIYHFLRKWLIV-HSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDK 75 (155)
Q Consensus 4 ~~~a~d~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~~ 75 (155)
.+.+.++..++++++.. +.+ ....+-|. |||---|.-+..+.+. -++.|+.||.+.+++.
T Consensus 175 ~~~~~ev~~~ir~~l~~~~~~-~~~~~~Il---YGGSV~~~N~~~l~~~--------~~vDG~LVG~Asl~~~ 235 (242)
T cd00311 175 PEQAQEVHAFIRKLLAELYGE-VAEKVRIL---YGGSVNPENAAELLAQ--------PDIDGVLVGGASLKAE 235 (242)
T ss_pred HHHHHHHHHHHHHHHHHhccc-ccCceeEE---ECCCCCHHHHHHHhcC--------CCCCEEEeehHhhCHH
Confidence 34578899999999975 433 33344444 9999999888888763 3589999999999864
No 124
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=54.85 E-value=52 Score=23.55 Aligned_cols=26 Identities=19% Similarity=0.396 Sum_probs=22.3
Q ss_pred CCCeEEEeeccCccchhHHHHHHHhc
Q 031674 26 ANPLYIAGDSYSGKIVPIVVQEISDG 51 (155)
Q Consensus 26 ~~~~yi~GESYgG~yvP~~a~~i~~~ 51 (155)
..++.++|+|.||.-+-.++..+...
T Consensus 63 ~~~~~l~g~s~Gg~~a~~~a~~l~~~ 88 (212)
T smart00824 63 GRPFVLVGHSSGGLLAHAVAARLEAR 88 (212)
T ss_pred CCCeEEEEECHHHHHHHHHHHHHHhC
Confidence 46899999999999998888887654
No 125
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=53.80 E-value=17 Score=30.59 Aligned_cols=56 Identities=11% Similarity=0.187 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCChh
Q 031674 7 ATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDK 75 (155)
Q Consensus 7 a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~~ 75 (155)
-+.|++-+++|.... .=..+.|.|+|+||--....|. +..+ .++-++|-+||--|+
T Consensus 143 e~~fvesiE~WR~~~---~L~KmilvGHSfGGYLaa~YAl---KyPe-------rV~kLiLvsP~Gf~~ 198 (365)
T KOG4409|consen 143 EKEFVESIEQWRKKM---GLEKMILVGHSFGGYLAAKYAL---KYPE-------RVEKLILVSPWGFPE 198 (365)
T ss_pred hHHHHHHHHHHHHHc---CCcceeEeeccchHHHHHHHHH---hChH-------hhceEEEeccccccc
Confidence 346777788887754 2247999999999976555544 3332 255667777765544
No 126
>PRK00042 tpiA triosephosphate isomerase; Provisional
Probab=53.16 E-value=54 Score=26.13 Aligned_cols=60 Identities=20% Similarity=0.327 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHHHHHH-ccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCChh
Q 031674 4 TLSATQIYHFLRKWLIV-HSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDK 75 (155)
Q Consensus 4 ~~~a~d~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~~ 75 (155)
.+.++.+..|++.++.. +. -....+-|. |||---|.-+..+.. ..++.|+.||.+.+++.
T Consensus 179 ~~~~~~v~~~Ir~~l~~~~~-~~~~~~~Il---YGGSV~~~N~~~l~~--------~~~vDG~LVG~Asl~~~ 239 (250)
T PRK00042 179 PEQAQEVHAFIRAVLAELYG-EVAEKVRIL---YGGSVKPDNAAELMA--------QPDIDGALVGGASLKAE 239 (250)
T ss_pred HHHHHHHHHHHHHHHHHhcc-cccCCceEE---EcCCCCHHHHHHHhc--------CCCCCEEEEeeeeechH
Confidence 45678889999999874 33 122234444 999999999999875 45789999999999875
No 127
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=52.80 E-value=14 Score=28.80 Aligned_cols=38 Identities=13% Similarity=0.262 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHH
Q 031674 10 IYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQE 47 (155)
Q Consensus 10 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~ 47 (155)
+...|.+.+......-.+++|++|.|=||.+...++-.
T Consensus 80 ~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~ 117 (220)
T PF10503_consen 80 FIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACA 117 (220)
T ss_pred hHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHh
Confidence 34444444554446667789999999999888777764
No 128
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=52.67 E-value=87 Score=27.31 Aligned_cols=79 Identities=15% Similarity=0.191 Sum_probs=53.8
Q ss_pred HHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCChhhhhHHHHHHh---h--
Q 031674 12 HFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDKIDQNSKIQFA---Y-- 86 (155)
Q Consensus 12 ~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~~~~~~~~~~~~---~-- 86 (155)
..++.||.+-|++ -|..|.|=||+-.-..|++- .=.+.||+.|.|-++.........-.. .
T Consensus 104 ~l~~~~Yg~~p~~----sY~~GcS~GGRqgl~~AQry----------P~dfDGIlAgaPA~~~~~~~~~~~~~~~~~~~~ 169 (474)
T PF07519_consen 104 ALIEAFYGKAPKY----SYFSGCSTGGRQGLMAAQRY----------PEDFDGILAGAPAINWTHLQLAHAWPAQVMYPD 169 (474)
T ss_pred HHHHHHhCCCCCc----eEEEEeCCCcchHHHHHHhC----------hhhcCeEEeCCchHHHHHHHHHhhhhhhhhccC
Confidence 5567888877766 79999999999887777764 446899999999998754432221111 1
Q ss_pred hccccCHHHHHHH----Hhhcc
Q 031674 87 LNALITYEIYKSA----KKNCK 104 (155)
Q Consensus 87 ~~gli~~~~~~~~----~~~C~ 104 (155)
..+.++..+++.+ .+.|.
T Consensus 170 ~~~~~~~~~~~~i~~avl~~CD 191 (474)
T PF07519_consen 170 PGGYLSPCKLDLIHAAVLAACD 191 (474)
T ss_pred CCCCCCHHHHHHHHHHHHHhcc
Confidence 1356777666544 35775
No 129
>PRK03995 hypothetical protein; Provisional
Probab=52.56 E-value=29 Score=28.08 Aligned_cols=47 Identities=11% Similarity=0.020 Sum_probs=30.8
Q ss_pred ChHHHHHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhc
Q 031674 2 NDTLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDG 51 (155)
Q Consensus 2 ~d~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~ 51 (155)
+|..+++-+...+...+..-+.=..+++-=+| ||||.|.+...+++.
T Consensus 157 ~d~~a~~~vA~avl~~l~~~~~~~~~~~iGiG---GgHYapr~T~~~l~~ 203 (267)
T PRK03995 157 KNERAGEILAEAVIEVLDSIEYEKFKPAIGIG---GGHYAPKFTKLALES 203 (267)
T ss_pred CCcHHHHHHHHHHHHHHhcccccCCCEEEEEC---CCCccHHHHHHHhhC
Confidence 56677777777777776532111223455556 899999999888763
No 130
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=52.46 E-value=20 Score=29.80 Aligned_cols=53 Identities=8% Similarity=-0.049 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHHccccCCCC-eEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCC
Q 031674 7 ATQIYHFLRKWLIVHSDFLANP-LYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVT 72 (155)
Q Consensus 7 a~d~~~fL~~f~~~fp~~~~~~-~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~ 72 (155)
-.++...+..+++.. .-.+ ++|.|+|.||..+-.+|..- .-.++++++.|+..
T Consensus 129 ~~~~~~~~~~~l~~l---~~~~~~~lvG~S~Gg~ia~~~a~~~----------p~~v~~lvl~~~~~ 182 (379)
T PRK00175 129 IRDWVRAQARLLDAL---GITRLAAVVGGSMGGMQALEWAIDY----------PDRVRSALVIASSA 182 (379)
T ss_pred HHHHHHHHHHHHHHh---CCCCceEEEEECHHHHHHHHHHHhC----------hHhhhEEEEECCCc
Confidence 345566666666543 3345 58999999998777776652 23568888877643
No 131
>PF07389 DUF1500: Protein of unknown function (DUF1500); InterPro: IPR009974 This family consists of several Orthopoxvirus specific proteins, which include Vaccinia virus, B6 protein, they are around 100 residues in length. The function of this family is unknown.
Probab=51.81 E-value=13 Score=25.06 Aligned_cols=30 Identities=23% Similarity=0.502 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHHccccCCCCeEEEeeccC
Q 031674 6 SATQIYHFLRKWLIVHSDFLANPLYIAGDSYS 37 (155)
Q Consensus 6 ~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYg 37 (155)
+-.+.+++.+.|+-+| |-.+.|.+-|+||+
T Consensus 5 vDvdIYDAvRaflLr~--Y~~KrfIV~g~S~~ 34 (100)
T PF07389_consen 5 VDVDIYDAVRAFLLRH--YYDKRFIVYGRSNA 34 (100)
T ss_pred cchhHHHHHHHHHHHH--HccceEEEecchHH
Confidence 3457899999999888 77788999999993
No 132
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=51.58 E-value=18 Score=30.86 Aligned_cols=36 Identities=14% Similarity=0.224 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHH
Q 031674 9 QIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVV 45 (155)
Q Consensus 9 d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a 45 (155)
..++|+++-...|. -..+++.|+|+|.||+-+-.++
T Consensus 159 ~al~wv~~~i~~fg-gd~~~v~~~G~SaG~~~~~~~~ 194 (493)
T cd00312 159 LALKWVQDNIAAFG-GDPDSVTIFGESAGGASVSLLL 194 (493)
T ss_pred HHHHHHHHHHHHhC-CCcceEEEEeecHHHHHhhhHh
Confidence 34455555555553 3456799999999998654443
No 133
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=51.29 E-value=24 Score=30.67 Aligned_cols=38 Identities=21% Similarity=0.322 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHHHHHccccCCCCeEEEeeccCccchh
Q 031674 4 TLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVP 42 (155)
Q Consensus 4 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP 42 (155)
+++=.|+-..| .++++.+-=+..|+..+|-||||+-..
T Consensus 145 eQALADfA~ll-~~lK~~~~a~~~pvIafGGSYGGMLaA 182 (492)
T KOG2183|consen 145 EQALADFAELL-TFLKRDLSAEASPVIAFGGSYGGMLAA 182 (492)
T ss_pred HHHHHHHHHHH-HHHhhccccccCcEEEecCchhhHHHH
Confidence 44445555444 455554444567999999999996543
No 134
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=51.06 E-value=9.4 Score=30.68 Aligned_cols=22 Identities=32% Similarity=0.699 Sum_probs=17.2
Q ss_pred CCCCeEEEeeccCccchhHHHH
Q 031674 25 LANPLYIAGDSYSGKIVPIVVQ 46 (155)
Q Consensus 25 ~~~~~yi~GESYgG~yvP~~a~ 46 (155)
..+|.|..|+||||+-+=.+++
T Consensus 103 ~~~P~y~vgHS~GGqa~gL~~~ 124 (281)
T COG4757 103 PGHPLYFVGHSFGGQALGLLGQ 124 (281)
T ss_pred CCCceEEeeccccceeeccccc
Confidence 4579999999999997654443
No 135
>cd03871 M14_CPB Peptidase M14 Carboxypeptidase B (CPB) belongs to the carboxypeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Carboxypeptidase B (CPB) enzymes only cleave the basic residues lysine or arginine. A/B subfamily enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The procarboxypeptidase B (PCPB) is produced by the exocrine pancreas and stored as stable zymogen in the pancreatic granules until secretion into the digestive tract occurs. PCPB has been reported to be a good serum marker for the diagnosis of acute pancreatitis and graft rejection in pancreas transplant recipients.
Probab=50.53 E-value=13 Score=30.34 Aligned_cols=35 Identities=11% Similarity=0.261 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHH
Q 031674 8 TQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIV 44 (155)
Q Consensus 8 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~ 44 (155)
+++.++|+++-+.||++.. +...|.||-|+-++.+
T Consensus 10 ~ei~~~l~~la~~~p~~v~--~~~IG~S~eGR~i~~l 44 (300)
T cd03871 10 ETIEAWTEQVASENPDLIS--RSQIGTTFEGRPIYLL 44 (300)
T ss_pred HHHHHHHHHHHHHCCCceE--EEEeeeCCCCCeeEEE
Confidence 5788999999999999865 7788999999877754
No 136
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=50.41 E-value=28 Score=26.97 Aligned_cols=63 Identities=16% Similarity=0.152 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHHc--cccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccce-eEecCCCCChhh
Q 031674 7 ATQIYHFLRKWLIVH--SDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKG-YMLGNPVTDDKI 76 (155)
Q Consensus 7 a~d~~~fL~~f~~~f--p~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkG-i~iGng~~d~~~ 76 (155)
++.+.+.++...+.. ..-..+++.|.|+|-||. +|+.++..... ..-++++ |.+|.|...+..
T Consensus 63 ~~~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGl----var~~l~~~~~---~~~~v~~iitl~tPh~g~~~ 128 (225)
T PF07819_consen 63 AEFLAEAIKYILELYKSNRPPPRSVILVGHSMGGL----VARSALSLPNY---DPDSVKTIITLGTPHRGSPL 128 (225)
T ss_pred HHHHHHHHHHHHHhhhhccCCCCceEEEEEchhhH----HHHHHHhcccc---ccccEEEEEEEcCCCCCccc
Confidence 445555555555544 223457899999999996 34444332211 1123344 456777766653
No 137
>PF10929 DUF2811: Protein of unknown function (DUF2811); InterPro: IPR021231 This is a bacterial family of uncharacterised proteins.
Probab=50.14 E-value=13 Score=23.02 Aligned_cols=23 Identities=4% Similarity=0.209 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHHHHccccCC
Q 031674 4 TLSATQIYHFLRKWLIVHSDFLA 26 (155)
Q Consensus 4 ~~~a~d~~~fL~~f~~~fp~~~~ 26 (155)
.++-+++...|+.|++.||++-.
T Consensus 4 aeiPe~L~~~m~~fie~hP~WDQ 26 (57)
T PF10929_consen 4 AEIPEDLHQAMKDFIETHPNWDQ 26 (57)
T ss_pred ccccHHHHHHHHHHHHcCCCchH
Confidence 45567899999999999999965
No 138
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=49.97 E-value=22 Score=29.96 Aligned_cols=53 Identities=13% Similarity=0.057 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCC
Q 031674 8 TQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTD 73 (155)
Q Consensus 8 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d 73 (155)
.++.+.|..|.+.. ...+++|.|+|+||..+-.+|. .. .-.++++++-|+...
T Consensus 181 ~~~a~~l~~~i~~l---~~~~~~LvG~s~GG~ia~~~a~----~~------P~~v~~lILi~~~~~ 233 (383)
T PLN03084 181 DEYVSSLESLIDEL---KSDKVSLVVQGYFSPPVVKYAS----AH------PDKIKKLILLNPPLT 233 (383)
T ss_pred HHHHHHHHHHHHHh---CCCCceEEEECHHHHHHHHHHH----hC------hHhhcEEEEECCCCc
Confidence 34444455555432 3357999999999954333333 21 234788888887653
No 139
>PF14542 Acetyltransf_CG: GCN5-related N-acetyl-transferase; PDB: 2H5M_A 2Q44_A 1XMT_A 2Q4Y_A 2IL4_A 2EVN_A 1R57_A.
Probab=49.66 E-value=13 Score=24.05 Aligned_cols=15 Identities=13% Similarity=0.518 Sum_probs=11.9
Q ss_pred HHHHHHHHHccccCC
Q 031674 12 HFLRKWLIVHSDFLA 26 (155)
Q Consensus 12 ~fL~~f~~~fp~~~~ 26 (155)
.|.+.||++||+|+.
T Consensus 63 ~y~~~~~~~hpey~d 77 (78)
T PF14542_consen 63 SYVAKYFRRHPEYQD 77 (78)
T ss_dssp HHHHHHHHH-GGGTT
T ss_pred HHHHHHHHhCccccc
Confidence 578899999999974
No 140
>PRK11460 putative hydrolase; Provisional
Probab=48.87 E-value=32 Score=26.53 Aligned_cols=24 Identities=17% Similarity=0.029 Sum_probs=18.5
Q ss_pred ccCCCCeEEEeeccCccchhHHHH
Q 031674 23 DFLANPLYIAGDSYSGKIVPIVVQ 46 (155)
Q Consensus 23 ~~~~~~~yi~GESYgG~yvP~~a~ 46 (155)
.....++++.|.|.||..+-.++.
T Consensus 99 ~~~~~~i~l~GfS~Gg~~al~~a~ 122 (232)
T PRK11460 99 GVGASATALIGFSQGAIMALEAVK 122 (232)
T ss_pred CCChhhEEEEEECHHHHHHHHHHH
Confidence 344567999999999988766554
No 141
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=48.71 E-value=42 Score=26.20 Aligned_cols=44 Identities=11% Similarity=0.130 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHH
Q 031674 4 TLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEI 48 (155)
Q Consensus 4 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i 48 (155)
.++..|+..++ .|+.+.|+-....+.++|-|+||+.+=.+|...
T Consensus 90 ~~~~~d~~a~~-~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~ 133 (236)
T COG0412 90 AEVLADIDAAL-DYLARQPQVDPKRIGVVGFCMGGGLALLAATRA 133 (236)
T ss_pred HHHHHHHHHHH-HHHHhCCCCCCceEEEEEEcccHHHHHHhhccc
Confidence 34445555544 677888877777899999999999877666653
No 142
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=48.16 E-value=21 Score=33.37 Aligned_cols=36 Identities=8% Similarity=0.191 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHH---HHHccccC---CCCeEEEeeccCccc
Q 031674 5 LSATQIYHFLRKW---LIVHSDFL---ANPLYIAGDSYSGKI 40 (155)
Q Consensus 5 ~~a~d~~~fL~~f---~~~fp~~~---~~~~yi~GESYgG~y 40 (155)
+.++.+.++++-- ++.-+||. ...+-|.|+|+||.-
T Consensus 154 dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiV 195 (973)
T KOG3724|consen 154 DQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIV 195 (973)
T ss_pred HHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHH
Confidence 3455555555544 44456676 556999999999963
No 143
>PRK05855 short chain dehydrogenase; Validated
Probab=48.11 E-value=24 Score=30.33 Aligned_cols=32 Identities=9% Similarity=0.053 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHHHHHccccCCCCeEEEeeccCccch
Q 031674 4 TLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIV 41 (155)
Q Consensus 4 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yv 41 (155)
+..++|+..+++.. . ...+++|.|+|+||..+
T Consensus 77 ~~~a~dl~~~i~~l----~--~~~~~~lvGhS~Gg~~a 108 (582)
T PRK05855 77 ARLADDFAAVIDAV----S--PDRPVHLLAHDWGSIQG 108 (582)
T ss_pred HHHHHHHHHHHHHh----C--CCCcEEEEecChHHHHH
Confidence 34556666666532 1 13479999999999443
No 144
>COG4425 Predicted membrane protein [Function unknown]
Probab=47.75 E-value=31 Score=30.35 Aligned_cols=36 Identities=14% Similarity=0.212 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHHHHccccCCCCeEEEeeccCcc
Q 031674 4 TLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGK 39 (155)
Q Consensus 4 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~ 39 (155)
.++|+.+.+..-.+.++-|+=+.-++|+.|||-|-.
T Consensus 374 ~~aa~aLf~aVy~yw~qLP~~sRPKLylhG~SLGa~ 409 (588)
T COG4425 374 ADAARALFEAVYGYWTQLPKSSRPKLYLHGESLGAM 409 (588)
T ss_pred hhHHHHHHHHHHHHHHhCCcCCCCceEEeccccccc
Confidence 467888999999999999998777799999998865
No 145
>PF00121 TIM: Triosephosphate isomerase; InterPro: IPR000652 Triosephosphate isomerase (5.3.1.1 from EC) (TIM) [] is the glycolytic enzyme that catalyses the reversible interconversion of glyceraldehyde 3-phosphate and dihydroxyacetone phosphate. TIM plays an important role in several metabolic pathways and is essential for efficient energy production. It is present in eukaryotes as well as in prokaryotes. TIM is a dimer of identical subunits, each of which is made up of about 250 amino-acid residues. A glutamic acid residue is involved in the catalytic mechanism [, ]. The tertiary structure of TIM has eight beta/alpha motifs folded into a barrel structure. The TIM barrel fold occurs ubiquitously and is found in numerous other enzymes that can be involved in energy metabolism, macromolecule metabolism, or small molecule metabolism []. The sequence around the active site residue is perfectly conserved in all known TIM's. Deficiencies in TIM are associated with haemolytic anaemia coupled with a progressive, severe neurological disorder [].; GO: 0004807 triose-phosphate isomerase activity, 0008152 metabolic process; PDB: 2YPI_A 1YPI_A 1NEY_B 1NF0_B 1I45_A 7TIM_A 3YPI_B 2H6R_H 2Y63_A 1N55_A ....
Probab=47.54 E-value=13 Score=29.50 Aligned_cols=62 Identities=19% Similarity=0.346 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHHHHH-ccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCChhh
Q 031674 4 TLSATQIYHFLRKWLIV-HSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDKI 76 (155)
Q Consensus 4 ~~~a~d~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~~~ 76 (155)
.+.++.+..++++++.. |.+-..+.+-|. |||.--|.-+..+.. ..++.|+.||.+.+++..
T Consensus 177 ~~~~~~~~~~Ir~~l~~~~~~~~~~~~~IL---YGGSV~~~N~~~l~~--------~~~iDG~LVG~asl~~~~ 239 (244)
T PF00121_consen 177 PEQIQEVHAFIREILAELYGEEVANNIRIL---YGGSVNPENAAELLS--------QPDIDGVLVGGASLKAES 239 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHHHHSEEE---EESSESTTTHHHHHT--------STT-SEEEESGGGGSTHH
T ss_pred HHHHHHHHHHHHHHHHHhccccccCceeEE---ECCcCCcccHHHHhc--------CCCCCEEEEchhhhcccc
Confidence 46678899999999864 322222334444 889988988888876 457899999999998853
No 146
>PF11104 PilM_2: Type IV pilus assembly protein PilM;; PDB: 2YCH_A.
Probab=44.18 E-value=46 Score=27.26 Aligned_cols=45 Identities=18% Similarity=0.245 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcc
Q 031674 5 LSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGI 52 (155)
Q Consensus 5 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n 52 (155)
+.+..+...|+-|..+++.-.=..+||+| ||-.+|.++.++.+.-
T Consensus 254 ~l~~EI~rsl~~y~~~~~~~~i~~I~L~G---gga~l~gL~~~l~~~l 298 (340)
T PF11104_consen 254 ELAREIRRSLDFYQSQSGGESIERIYLSG---GGARLPGLAEYLSEEL 298 (340)
T ss_dssp HHHHHHHHHHHHHHHH------SEEEEES---GGGGSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCEEEEEC---CccchhhHHHHHHHHH
Confidence 44556666666666666655556799999 8999999999997754
No 147
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=44.13 E-value=32 Score=28.54 Aligned_cols=32 Identities=19% Similarity=0.205 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHHHHHccccCCCCeEEEeeccCc
Q 031674 4 TLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSG 38 (155)
Q Consensus 4 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG 38 (155)
+..|.|+..|+..+-. .++..+..|.|+|.||
T Consensus 103 ~~ma~dv~~Fi~~v~~---~~~~~~~~l~GHsmGG 134 (315)
T KOG2382|consen 103 EAMAEDVKLFIDGVGG---STRLDPVVLLGHSMGG 134 (315)
T ss_pred HHHHHHHHHHHHHccc---ccccCCceecccCcch
Confidence 4567777777765543 2566789999999999
No 148
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=43.99 E-value=37 Score=26.94 Aligned_cols=76 Identities=18% Similarity=0.078 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCChhhhhHHHHH
Q 031674 4 TLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDKIDQNSKIQ 83 (155)
Q Consensus 4 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~~~~~~~~~~ 83 (155)
+++-.++.++++--|+.+|.-+. +.+.|+|-|.|-+.....++- ...+.|+.+-.|+-+-+ -.+-.+
T Consensus 115 ~qt~~~~~~gv~filk~~~n~k~--l~~gGHSaGAHLa~qav~R~r---------~prI~gl~l~~GvY~l~--EL~~te 181 (270)
T KOG4627|consen 115 EQTMTQFTHGVNFILKYTENTKV--LTFGGHSAGAHLAAQAVMRQR---------SPRIWGLILLCGVYDLR--ELSNTE 181 (270)
T ss_pred HHHHHHHHHHHHHHHHhccccee--EEEcccchHHHHHHHHHHHhc---------CchHHHHHHHhhHhhHH--HHhCCc
Confidence 56777888888877888866543 999999999987665555531 24557777777765532 222333
Q ss_pred HhhhccccC
Q 031674 84 FAYLNALIT 92 (155)
Q Consensus 84 ~~~~~gli~ 92 (155)
+....||-.
T Consensus 182 ~g~dlgLt~ 190 (270)
T KOG4627|consen 182 SGNDLGLTE 190 (270)
T ss_pred cccccCccc
Confidence 334455543
No 149
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=43.28 E-value=17 Score=27.73 Aligned_cols=27 Identities=30% Similarity=0.645 Sum_probs=22.4
Q ss_pred cCCCCeEEEeeccCccchhHHHHHHHh
Q 031674 24 FLANPLYIAGDSYSGKIVPIVVQEISD 50 (155)
Q Consensus 24 ~~~~~~yi~GESYgG~yvP~~a~~i~~ 50 (155)
...-|+.|-|.||||.....+|..+..
T Consensus 86 l~~gpLi~GGkSmGGR~aSmvade~~A 112 (213)
T COG3571 86 LAEGPLIIGGKSMGGRVASMVADELQA 112 (213)
T ss_pred ccCCceeeccccccchHHHHHHHhhcC
Confidence 344589999999999999999988754
No 150
>PF08060 NOSIC: NOSIC (NUC001) domain; InterPro: IPR012976 This is the central domain in Nop56/SIK1-like proteins [].; PDB: 3PLA_K 3ICX_B 3ID6_A 3ID5_E 3NVM_A 3NMU_B 2NNW_C 3NVI_A 3NVK_A 2OZB_E ....
Probab=43.12 E-value=25 Score=21.02 Aligned_cols=20 Identities=15% Similarity=0.298 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHH-HccccCC
Q 031674 7 ATQIYHFLRKWLI-VHSDFLA 26 (155)
Q Consensus 7 a~d~~~fL~~f~~-~fp~~~~ 26 (155)
-..+..+++.|+. +|||+.+
T Consensus 16 i~~~~~~lre~Y~~~FPEL~~ 36 (53)
T PF08060_consen 16 INLLHMRLREWYSWHFPELES 36 (53)
T ss_dssp HHHHHHHHHHHHTTTSTTHHH
T ss_pred HHHHHHHHHHHHHccchhHHH
Confidence 4567889999998 5999853
No 151
>PRK13962 bifunctional phosphoglycerate kinase/triosephosphate isomerase; Provisional
Probab=42.47 E-value=62 Score=29.54 Aligned_cols=62 Identities=16% Similarity=0.256 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHHHHHH-ccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCChhh
Q 031674 4 TLSATQIYHFLRKWLIV-HSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDKI 76 (155)
Q Consensus 4 ~~~a~d~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~~~ 76 (155)
.+.++++..|+++++.. +-+-....+=|. |||.--|.-+..|.. ..++.|+.||...+++..
T Consensus 574 ~e~aqevh~~IR~~l~~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~--------~~diDG~LVGgASL~~~~ 636 (645)
T PRK13962 574 PEQAQEVHAFIRKLVAELYGEEAARKVRIL---YGGSVKSENAAGLFN--------QPDIDGGLVGGASLKAQE 636 (645)
T ss_pred HHHHHHHHHHHHHHHHHHhChhhhccceEE---ecCCCCHhHHHHHhc--------CCCCCeEEeehHhcCHHH
Confidence 46788899999999964 322212223333 999999999999976 357899999999998853
No 152
>PRK10115 protease 2; Provisional
Probab=42.27 E-value=37 Score=30.95 Aligned_cols=60 Identities=15% Similarity=0.145 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCChhhh
Q 031674 7 ATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDKID 77 (155)
Q Consensus 7 a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~~~~ 77 (155)
-+|+.++.+. +....--....+.|.|-||||..+-.++. +. + =-++.++.+.|++|....
T Consensus 505 ~~D~~a~~~~-Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~---~~------P-dlf~A~v~~vp~~D~~~~ 564 (686)
T PRK10115 505 FNDYLDACDA-LLKLGYGSPSLCYGMGGSAGGMLMGVAIN---QR------P-ELFHGVIAQVPFVDVVTT 564 (686)
T ss_pred HHHHHHHHHH-HHHcCCCChHHeEEEEECHHHHHHHHHHh---cC------h-hheeEEEecCCchhHhhh
Confidence 4566666643 33333334467999999999975443322 11 1 248999999999998754
No 153
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=41.91 E-value=39 Score=29.55 Aligned_cols=36 Identities=14% Similarity=0.074 Sum_probs=25.4
Q ss_pred CCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCC
Q 031674 25 LANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNP 70 (155)
Q Consensus 25 ~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng 70 (155)
...++++.|+|.||..+-.+|.+ .. =.++++++.++
T Consensus 272 g~~k~~LVGhSmGG~iAl~~A~~---~P-------e~V~~LVLi~~ 307 (481)
T PLN03087 272 KVKSFHIVAHSLGCILALALAVK---HP-------GAVKSLTLLAP 307 (481)
T ss_pred CCCCEEEEEECHHHHHHHHHHHh---Ch-------HhccEEEEECC
Confidence 34579999999999977766654 11 13577777664
No 154
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=40.60 E-value=45 Score=24.70 Aligned_cols=45 Identities=11% Similarity=0.135 Sum_probs=29.1
Q ss_pred HHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCC
Q 031674 19 IVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTD 73 (155)
Q Consensus 19 ~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d 73 (155)
+.-+.. ..+.+|.|+|.|..-+-..+. .. ...+++|+++-.|+-.
T Consensus 48 ~~i~~~-~~~~ilVaHSLGc~~~l~~l~--~~-------~~~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 48 QAIDAI-DEPTILVAHSLGCLTALRWLA--EQ-------SQKKVAGALLVAPFDP 92 (171)
T ss_dssp HCCHC--TTTEEEEEETHHHHHHHHHHH--HT-------CCSSEEEEEEES--SC
T ss_pred HHHhhc-CCCeEEEEeCHHHHHHHHHHh--hc-------ccccccEEEEEcCCCc
Confidence 334443 457999999999975554444 11 2568999999999854
No 155
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=40.45 E-value=27 Score=28.01 Aligned_cols=25 Identities=20% Similarity=0.231 Sum_probs=22.5
Q ss_pred CeEEEeeccCccchhHHHHHHHhcc
Q 031674 28 PLYIAGDSYSGKIVPIVVQEISDGI 52 (155)
Q Consensus 28 ~~yi~GESYgG~yvP~~a~~i~~~n 52 (155)
|.++.|-|+||.-+=.+|.++...-
T Consensus 66 Py~L~G~S~GG~vA~evA~qL~~~G 90 (257)
T COG3319 66 PYVLLGWSLGGAVAFEVAAQLEAQG 90 (257)
T ss_pred CEEEEeeccccHHHHHHHHHHHhCC
Confidence 8999999999999999999987754
No 156
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=40.41 E-value=46 Score=23.76 Aligned_cols=49 Identities=18% Similarity=0.251 Sum_probs=28.6
Q ss_pred HHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCC
Q 031674 11 YHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVT 72 (155)
Q Consensus 11 ~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~ 72 (155)
...+..|+.. +...++.+.|+|+||..+-.++...-+ .++++++-++..
T Consensus 75 ~~~~~~~~~~---~~~~~~~l~G~S~Gg~~~~~~~~~~p~----------~~~~~v~~~~~~ 123 (282)
T COG0596 75 ADDLAALLDA---LGLEKVVLVGHSMGGAVALALALRHPD----------RVRGLVLIGPAP 123 (282)
T ss_pred HHHHHHHHHH---hCCCceEEEEecccHHHHHHHHHhcch----------hhheeeEecCCC
Confidence 3445555553 333349999999998766655554322 455565555443
No 157
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=39.86 E-value=51 Score=29.12 Aligned_cols=40 Identities=15% Similarity=0.156 Sum_probs=31.3
Q ss_pred hHHHHHHHHHHHHHHHHHccccCCCCeEEEeeccCccchh
Q 031674 3 DTLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVP 42 (155)
Q Consensus 3 d~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP 42 (155)
-.++=.|+..|++.-=.+|+.-.+.|+..+|-||.|....
T Consensus 148 s~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsA 187 (514)
T KOG2182|consen 148 SLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSA 187 (514)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHH
Confidence 3566678889988887888766666899999999996543
No 158
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=39.37 E-value=21 Score=27.28 Aligned_cols=44 Identities=14% Similarity=-0.090 Sum_probs=28.9
Q ss_pred ccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCChh
Q 031674 21 HSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDK 75 (155)
Q Consensus 21 fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~~ 75 (155)
++-...+ ..|+|.|.||.-+-.++.+- . =-+.+++.-.|.+++.
T Consensus 110 ~~~~~~~-~~i~G~S~GG~~Al~~~l~~---P-------d~F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 110 YRTDPDR-RAIAGHSMGGYGALYLALRH---P-------DLFGAVIAFSGALDPS 153 (251)
T ss_dssp SSEEECC-EEEEEETHHHHHHHHHHHHS---T-------TTESEEEEESEESETT
T ss_pred cccccce-eEEeccCCCcHHHHHHHHhC---c-------cccccccccCcccccc
Confidence 4333333 89999999998766666542 1 2356777777776664
No 159
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=39.36 E-value=44 Score=33.73 Aligned_cols=37 Identities=11% Similarity=0.180 Sum_probs=24.9
Q ss_pred cCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCC
Q 031674 24 FLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNP 70 (155)
Q Consensus 24 ~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng 70 (155)
+...+++|.|+|+||..+-.+|.+- +-.++++++-+|
T Consensus 1442 l~~~~v~LvGhSmGG~iAl~~A~~~----------P~~V~~lVlis~ 1478 (1655)
T PLN02980 1442 ITPGKVTLVGYSMGARIALYMALRF----------SDKIEGAVIISG 1478 (1655)
T ss_pred hCCCCEEEEEECHHHHHHHHHHHhC----------hHhhCEEEEECC
Confidence 3446899999999998777666531 124566666544
No 160
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=38.16 E-value=29 Score=27.83 Aligned_cols=51 Identities=12% Similarity=0.216 Sum_probs=40.0
Q ss_pred HHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCCh
Q 031674 14 LRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDD 74 (155)
Q Consensus 14 L~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~ 74 (155)
...++-.+|...++.+.++|-|-||.-+-.+|..- .-.+.++++-|-+++-
T Consensus 136 vldyl~t~~~~dktkivlfGrSlGGAvai~lask~----------~~ri~~~ivENTF~SI 186 (300)
T KOG4391|consen 136 VLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKN----------SDRISAIIVENTFLSI 186 (300)
T ss_pred HHHHHhcCccCCcceEEEEecccCCeeEEEeeccc----------hhheeeeeeechhccc
Confidence 34566788999999999999999998777666542 2367889999988875
No 161
>PRK13604 luxD acyl transferase; Provisional
Probab=37.92 E-value=57 Score=26.89 Aligned_cols=37 Identities=22% Similarity=0.222 Sum_probs=26.3
Q ss_pred CCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCChh
Q 031674 27 NPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDK 75 (155)
Q Consensus 27 ~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~~ 75 (155)
.++.|.|+|-||.-+...|. ..+++++++..|+.+-.
T Consensus 108 ~~I~LiG~SmGgava~~~A~------------~~~v~~lI~~sp~~~l~ 144 (307)
T PRK13604 108 NNLGLIAASLSARIAYEVIN------------EIDLSFLITAVGVVNLR 144 (307)
T ss_pred CceEEEEECHHHHHHHHHhc------------CCCCCEEEEcCCcccHH
Confidence 47999999999976433322 13478888888888843
No 162
>smart00631 Zn_pept Zn_pept.
Probab=35.93 E-value=29 Score=27.71 Aligned_cols=36 Identities=19% Similarity=0.288 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHH
Q 031674 7 ATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIV 44 (155)
Q Consensus 7 a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~ 44 (155)
-+++..+|+.+-+.+|++. .+...|.|+.|.-++.+
T Consensus 4 y~e~~~~l~~l~~~~~~~v--~~~~iG~S~~Gr~i~~~ 39 (277)
T smart00631 4 YEEIEAWLKELAARYPDLV--RLVSIGKSVEGRPIWVL 39 (277)
T ss_pred HHHHHHHHHHHHHHCCCce--EEEeceecCCCCceEEE
Confidence 3678899999989999875 47888999998876643
No 163
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=35.74 E-value=1.7e+02 Score=25.95 Aligned_cols=59 Identities=10% Similarity=0.040 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHH-HHHHhcccCCCCCccccceeEecCCCCChh
Q 031674 8 TQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVV-QEISDGIDAGHKPRMNLKGYMLGNPVTDDK 75 (155)
Q Consensus 8 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a-~~i~~~n~~~~~~~inLkGi~iGng~~d~~ 75 (155)
..+..++..+.+. ....++++.|.|-||..+.... .....+. .-.++++++-+..+|..
T Consensus 246 ~~i~~al~~v~~~---~g~~kv~lvG~cmGGtl~a~ala~~aa~~~------~~rv~slvll~t~~Df~ 305 (532)
T TIGR01838 246 DGVIAALEVVEAI---TGEKQVNCVGYCIGGTLLSTALAYLAARGD------DKRIKSATFFTTLLDFS 305 (532)
T ss_pred HHHHHHHHHHHHh---cCCCCeEEEEECcCcHHHHHHHHHHHHhCC------CCccceEEEEecCcCCC
Confidence 4455566555543 3456799999999999876533 2322221 11367777666666643
No 164
>PRK14905 triosephosphate isomerase/PTS system glucose/sucrose-specific transporter subunit IIB; Provisional
Probab=35.30 E-value=1.3e+02 Score=25.24 Aligned_cols=61 Identities=13% Similarity=0.238 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHHHHH-ccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCChhh
Q 031674 4 TLSATQIYHFLRKWLIV-HSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDKI 76 (155)
Q Consensus 4 ~~~a~d~~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~~~ 76 (155)
.+.++....++++++.. +-+- ...+-|. |||---|.-+..+.. ..++.|+.||.+.+++..
T Consensus 189 ~~~~~~~~~~Ir~~l~~~~~~~-~~~v~IL---YGGSV~~~N~~~l~~--------~~~iDG~LVG~asl~~~~ 250 (355)
T PRK14905 189 AEYADEKHAIIKQCLFELFAEE-SKKIPVL---YGGSVNLENANELIM--------KPHIDGLFIGRSAWDAQC 250 (355)
T ss_pred HHHHHHHHHHHHHHHHHHhccc-cCceeEE---EeCcCCHHHHHHHhc--------CCCCCEEEechhhccHHH
Confidence 45677888999998753 4222 2234444 999999999999876 357899999999998853
No 165
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=34.83 E-value=31 Score=25.87 Aligned_cols=33 Identities=12% Similarity=0.255 Sum_probs=24.9
Q ss_pred HHHHHHHHccccCCCCeEEEeeccCccchhHHH
Q 031674 13 FLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVV 45 (155)
Q Consensus 13 fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a 45 (155)
....|++..|+....++-++|-|+||+++-.+|
T Consensus 84 aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a 116 (218)
T PF01738_consen 84 AAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLA 116 (218)
T ss_dssp HHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHH
T ss_pred HHHHHHHhccccCCCcEEEEEEecchHHhhhhh
Confidence 334666777766667899999999998766554
No 166
>PF11943 DUF3460: Protein of unknown function (DUF3460); InterPro: IPR021853 This family of proteins are functionally uncharacterised. This protein is found in bacteria. Proteins in this family are about 70 amino acids in length. This protein has a conserved WDK sequence motif.
Probab=34.43 E-value=39 Score=21.08 Aligned_cols=18 Identities=22% Similarity=0.414 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHHHccccC
Q 031674 8 TQIYHFLRKWLIVHSDFL 25 (155)
Q Consensus 8 ~d~~~fL~~f~~~fp~~~ 25 (155)
.++..||.++..++|++.
T Consensus 5 Se~TqFl~~lk~~~Pele 22 (60)
T PF11943_consen 5 SEITQFLNQLKAKHPELE 22 (60)
T ss_pred CHHHHHHHHHHHhCCchH
Confidence 367889999999999984
No 167
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=34.32 E-value=1.3e+02 Score=23.93 Aligned_cols=58 Identities=14% Similarity=0.139 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCcccc-ceeEecCCCC
Q 031674 7 ATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNL-KGYMLGNPVT 72 (155)
Q Consensus 7 a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inL-kGi~iGng~~ 72 (155)
|+-+...|+.. ..+|.=+.+.+.|+|.||.-+ ..++.+.-.... ...| |=|.||.|+=
T Consensus 86 a~wl~~vl~~L---~~~Y~~~~~N~VGHSmGg~~~---~~yl~~~~~~~~--~P~l~K~V~Ia~pfn 144 (255)
T PF06028_consen 86 AKWLKKVLKYL---KKKYHFKKFNLVGHSMGGLSW---TYYLENYGNDKN--LPKLNKLVTIAGPFN 144 (255)
T ss_dssp HHHHHHHHHHH---HHCC--SEEEEEEETHHHHHH---HHHHHHCTTGTT--S-EEEEEEEES--TT
T ss_pred HHHHHHHHHHH---HHhcCCCEEeEEEECccHHHH---HHHHHHhccCCC--CcccceEEEeccccC
Confidence 34444444333 334555679999999999643 456655332211 1133 4455665553
No 168
>PRK07581 hypothetical protein; Validated
Probab=33.70 E-value=53 Score=26.42 Aligned_cols=23 Identities=9% Similarity=-0.116 Sum_probs=17.9
Q ss_pred CCCC-eEEEeeccCccchhHHHHH
Q 031674 25 LANP-LYIAGDSYSGKIVPIVVQE 47 (155)
Q Consensus 25 ~~~~-~yi~GESYgG~yvP~~a~~ 47 (155)
.-.+ .+|.|.|+||..+-.+|.+
T Consensus 121 gi~~~~~lvG~S~GG~va~~~a~~ 144 (339)
T PRK07581 121 GIERLALVVGWSMGAQQTYHWAVR 144 (339)
T ss_pred CCCceEEEEEeCHHHHHHHHHHHH
Confidence 3346 5799999999988777765
No 169
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=33.69 E-value=98 Score=26.56 Aligned_cols=57 Identities=21% Similarity=0.234 Sum_probs=40.0
Q ss_pred ChHHHHHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCC
Q 031674 2 NDTLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTD 73 (155)
Q Consensus 2 ~d~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d 73 (155)
++..+++.+++|-.+-+ .|+..++.|.|-|-||.-+...|.. ..++|++++-..+=|
T Consensus 290 n~~nA~DaVvQfAI~~L----gf~~edIilygWSIGGF~~~waAs~-----------YPdVkavvLDAtFDD 346 (517)
T KOG1553|consen 290 NTLNAADAVVQFAIQVL----GFRQEDIILYGWSIGGFPVAWAASN-----------YPDVKAVVLDATFDD 346 (517)
T ss_pred cchHHHHHHHHHHHHHc----CCCccceEEEEeecCCchHHHHhhc-----------CCCceEEEeecchhh
Confidence 44555555555544433 5888899999999999977766652 578899988655433
No 170
>PF09094 DUF1925: Domain of unknown function (DUF1925); InterPro: IPR015178 Alpha-amylase is classified as family 13 of the glycosyl hydrolases and is present in archaea, bacteria, plants and animals. Alpha-amylase is an essential enzyme in alpha-glucan metabolism, acting to catalyse the hydrolysis of alpha-1,4-glucosidic bonds of glycogen, starch and related polysaccharides. Although all alpha-amylases possess the same catalytic function, they can vary with respect to sequence. In general, they are composed of three domains: a TIM barrel containing the active site residues and chloride ion-binding site (domain A), a long loop region inserted between the third beta strand and the alpha-helix of domain A that contains calcium-binding site(s) (domain B), and a C-terminal beta-sheet domain that appears to show some variability in sequence and length between amylases (domain C) []. Amylases have at least one conserved calcium-binding site, as calcium is essential for the stability of the enzyme. The chloride-binding functions to activate the enzyme, which acts by a two-step mechanism involving a catalytic nucleophile base (usually an Asp) and a catalytic proton donor (usually a Glu) that are responsible for the formation of the beta-linked glycosyl-enzyme intermediate. This entry represents a domain found in prokaryotic alpha-amylase (3.2.1.1 from EC) and 4-alpha-glucanotransferase (2.4.1.25 from EC). It is adjacent to the C-terminal domain (see IPR015179 from INTERPRO). The exact function of this domain is, as yet, unknown. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; PDB: 1K1X_B 1K1W_A 1K1Y_A.
Probab=32.83 E-value=30 Score=22.83 Aligned_cols=26 Identities=19% Similarity=0.304 Sum_probs=17.3
Q ss_pred CCCCeEEEeeccCccchhHHHHHHHhc
Q 031674 25 LANPLYIAGDSYSGKIVPIVVQEISDG 51 (155)
Q Consensus 25 ~~~~~yi~GESYgG~yvP~~a~~i~~~ 51 (155)
+.++.|=-| -+||.|.|.+-+.+.+.
T Consensus 47 QcNd~yWHG-~FGGlYlp~LR~a~y~~ 72 (80)
T PF09094_consen 47 QCNDAYWHG-LFGGLYLPHLRHAAYRH 72 (80)
T ss_dssp TBGGGG--S-SS-GGG-HHHHHHHHHH
T ss_pred ccCcchhcc-cccceecHHHHHHHHHH
Confidence 445656556 89999999999998874
No 171
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=30.79 E-value=74 Score=25.72 Aligned_cols=35 Identities=23% Similarity=0.213 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHH----HH-ccccCCCCeEEEeeccCccchh
Q 031674 7 ATQIYHFLRKWL----IV-HSDFLANPLYIAGDSYSGKIVP 42 (155)
Q Consensus 7 a~d~~~fL~~f~----~~-fp~~~~~~~yi~GESYgG~yvP 42 (155)
|+.+.+||.+=+ +. .+- ...+--|+|+|+||-.+=
T Consensus 113 ~~~f~~fL~~~lkP~Ie~~y~~-~~~~~~i~GhSlGGLfvl 152 (264)
T COG2819 113 GDAFREFLTEQLKPFIEARYRT-NSERTAIIGHSLGGLFVL 152 (264)
T ss_pred hHHHHHHHHHhhHHHHhccccc-CcccceeeeecchhHHHH
Confidence 345555555433 32 222 233589999999997653
No 172
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=30.78 E-value=1.2e+02 Score=29.16 Aligned_cols=25 Identities=16% Similarity=0.313 Sum_probs=21.5
Q ss_pred CCeEEEeeccCccchhHHHHHHHhc
Q 031674 27 NPLYIAGDSYSGKIVPIVVQEISDG 51 (155)
Q Consensus 27 ~~~yi~GESYgG~yvP~~a~~i~~~ 51 (155)
.++++.|.|+||.-+-.+|.++.+.
T Consensus 1133 ~p~~l~G~S~Gg~vA~e~A~~l~~~ 1157 (1296)
T PRK10252 1133 GPYHLLGYSLGGTLAQGIAARLRAR 1157 (1296)
T ss_pred CCEEEEEechhhHHHHHHHHHHHHc
Confidence 4899999999999888888887653
No 173
>PLN02872 triacylglycerol lipase
Probab=30.36 E-value=75 Score=26.93 Aligned_cols=33 Identities=12% Similarity=0.174 Sum_probs=23.7
Q ss_pred HHH-HHHHHHHHHHHHHccccCCCCeEEEeeccCccch
Q 031674 5 LSA-TQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIV 41 (155)
Q Consensus 5 ~~a-~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yv 41 (155)
+.| .|+-++++...+.- ..++++.|+|.||...
T Consensus 141 e~a~~Dl~a~id~i~~~~----~~~v~~VGhS~Gg~~~ 174 (395)
T PLN02872 141 ELALYDLAEMIHYVYSIT----NSKIFIVGHSQGTIMS 174 (395)
T ss_pred HHHHHHHHHHHHHHHhcc----CCceEEEEECHHHHHH
Confidence 455 67777777666432 3589999999999654
No 174
>TIGR01175 pilM type IV pilus assembly protein PilM. This protein is required for the assembly of the type IV fimbria in Pseudomonas aeruginosa responsible for twitching motility, and for a similar pilus-like structure in Synechocystis. It is also found in species such as Deinococcus described as having natural transformation (for which a type IV pilus-like structure is proposed) but not fimbria.
Probab=29.74 E-value=1.2e+02 Score=24.58 Aligned_cols=41 Identities=17% Similarity=0.144 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhc
Q 031674 8 TQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDG 51 (155)
Q Consensus 8 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~ 51 (155)
..+...|+-|..+++.-.-..+||+| ||..+|.+...+.+.
T Consensus 265 ~eI~~~l~~~~~~~~~~~i~~I~LtG---gga~~~gl~~~l~~~ 305 (348)
T TIGR01175 265 DEIRRSLQFFTAQSGTNSLDGLVLAG---GGATLSGLDAAIYQR 305 (348)
T ss_pred HHHHHHHHhhcCCCCCcccceEEEEC---ccccchhHHHHHHHH
Confidence 33344444444444433345699999 888899998888664
No 175
>cd03859 M14_CPT Peptidase M14-like domain of carboxypeptidase (CP) T (CPT), CPT belongs to the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPT has moderate similarity to CPA and CPB, and exhibits dual-substrate specificity by cleaving C-terminal hydrophobic amino acid residues like CPA and C-terminal positively charged residues like CPB. CPA and CPB are M14 family peptidases but do not belong to this CPT group. The substrate specificity difference between CPT and CPA and CPB is ascribed to a few amino acid substitutions at the substrate-binding pocket while the spatial organization of the binding site remains the same as in all Zn-CPs. CPT has increased thermal stability in presence of Ca2+ ions, and two disulfide bridges which give an additional stabilization factor.
Probab=29.39 E-value=46 Score=26.95 Aligned_cols=34 Identities=15% Similarity=0.167 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHHccccCCCCeEEEeeccCccchhH
Q 031674 8 TQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPI 43 (155)
Q Consensus 8 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~ 43 (155)
+++..+|+.+-.++|++. .++..|.|+-|+=++.
T Consensus 8 ~ei~~~l~~l~~~~p~~v--~~~~iG~S~eGR~i~~ 41 (295)
T cd03859 8 LEMVDELNAAAAAYPNLT--KVKSIGKSYEGRDIIA 41 (295)
T ss_pred HHHHHHHHHHHHHCCCce--EEEeeeecCCCCeEEE
Confidence 578899999999999964 4888899999985543
No 176
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=29.28 E-value=86 Score=25.84 Aligned_cols=43 Identities=14% Similarity=0.214 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHh
Q 031674 5 LSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISD 50 (155)
Q Consensus 5 ~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~ 50 (155)
..+.++...+.+.+... ..+++.+.|+|-||.-+..++..+-.
T Consensus 108 ~~~~ql~~~V~~~l~~~---ga~~v~LigHS~GG~~~ry~~~~~~~ 150 (336)
T COG1075 108 VRGEQLFAYVDEVLAKT---GAKKVNLIGHSMGGLDSRYYLGVLGG 150 (336)
T ss_pred ccHHHHHHHHHHHHhhc---CCCceEEEeecccchhhHHHHhhcCc
Confidence 45667777777777644 33789999999999999977776653
No 177
>PRK06489 hypothetical protein; Provisional
Probab=29.25 E-value=70 Score=26.17 Aligned_cols=21 Identities=24% Similarity=0.210 Sum_probs=15.3
Q ss_pred CCe-EEEeeccCccchhHHHHH
Q 031674 27 NPL-YIAGDSYSGKIVPIVVQE 47 (155)
Q Consensus 27 ~~~-yi~GESYgG~yvP~~a~~ 47 (155)
.++ +|.|+|.||..+-.+|.+
T Consensus 153 ~~~~~lvG~SmGG~vAl~~A~~ 174 (360)
T PRK06489 153 KHLRLILGTSMGGMHAWMWGEK 174 (360)
T ss_pred CceeEEEEECHHHHHHHHHHHh
Confidence 356 489999999766666643
No 178
>COG0400 Predicted esterase [General function prediction only]
Probab=29.25 E-value=1.1e+02 Score=23.69 Aligned_cols=78 Identities=10% Similarity=0.028 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCChhhh---hHH
Q 031674 4 TLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDKID---QNS 80 (155)
Q Consensus 4 ~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~~~~---~~~ 80 (155)
...+..+.+||....+++ ....+++.+.|-|-|+.++-.+...- +-.++|+++=.|..-+..+ ...
T Consensus 77 ~~~~~~~~~~l~~~~~~~-gi~~~~ii~~GfSqGA~ial~~~l~~----------~~~~~~ail~~g~~~~~~~~~~~~~ 145 (207)
T COG0400 77 DLETEKLAEFLEELAEEY-GIDSSRIILIGFSQGANIALSLGLTL----------PGLFAGAILFSGMLPLEPELLPDLA 145 (207)
T ss_pred HHHHHHHHHHHHHHHHHh-CCChhheEEEecChHHHHHHHHHHhC----------chhhccchhcCCcCCCCCccccccC
Confidence 345667778888887766 33356899999999998766554432 2356666666666555421 233
Q ss_pred HHHHhhhccccC
Q 031674 81 KIQFAYLNALIT 92 (155)
Q Consensus 81 ~~~~~~~~gli~ 92 (155)
..+.+..||--|
T Consensus 146 ~~pill~hG~~D 157 (207)
T COG0400 146 GTPILLSHGTED 157 (207)
T ss_pred CCeEEEeccCcC
Confidence 444555565433
No 179
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=28.84 E-value=68 Score=27.20 Aligned_cols=25 Identities=12% Similarity=0.218 Sum_probs=18.8
Q ss_pred ccccCC----CCeEEEeeccCccchhHHH
Q 031674 21 HSDFLA----NPLYIAGDSYSGKIVPIVV 45 (155)
Q Consensus 21 fp~~~~----~~~yi~GESYgG~yvP~~a 45 (155)
-|.++. .++-+.|+||||.-+-.++
T Consensus 149 sP~l~~~ld~~~Vgv~GhS~GG~T~m~la 177 (365)
T COG4188 149 SPALAGRLDPQRVGVLGHSFGGYTAMELA 177 (365)
T ss_pred CcccccccCccceEEEecccccHHHHHhc
Confidence 375654 4799999999998776554
No 180
>cd06905 Peptidase_M14-like_8 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe
Probab=28.77 E-value=47 Score=27.94 Aligned_cols=35 Identities=20% Similarity=0.352 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhH
Q 031674 7 ATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPI 43 (155)
Q Consensus 7 a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~ 43 (155)
-+++..+|+.+-.++|++.. +...|.||-|+=++.
T Consensus 7 y~ei~~~L~~La~~~P~lv~--l~~IG~S~EGR~I~~ 41 (360)
T cd06905 7 YDELTAALQAWASAYPQLCS--LESIGKSYEGRDIWL 41 (360)
T ss_pred HHHHHHHHHHHHHHCCCceE--EEEeeecCCCCceEE
Confidence 36789999999889998754 788899999985543
No 181
>PF07533 BRK: BRK domain; InterPro: IPR006576 BRK is a domain of unknown function found only in the metazoa and in association with CHROMO domain (IPR000953 from INTERPRO) and DEAD/DEAH box helicase domain (IPR011545 from INTERPRO).; GO: 0005515 protein binding, 0016817 hydrolase activity, acting on acid anhydrides; PDB: 2DL6_A 2CKA_A 2V0F_A 2V0E_A 2CKC_A.
Probab=28.76 E-value=36 Score=19.94 Aligned_cols=12 Identities=33% Similarity=0.778 Sum_probs=9.3
Q ss_pred HHHHHHHccccC
Q 031674 14 LRKWLIVHSDFL 25 (155)
Q Consensus 14 L~~f~~~fp~~~ 25 (155)
|..|+..||.|.
T Consensus 30 L~~WL~~~P~y~ 41 (46)
T PF07533_consen 30 LEEWLEEHPGYE 41 (46)
T ss_dssp HHHHHHH-TTEE
T ss_pred HHHHHHHCcCce
Confidence 778999999984
No 182
>cd06248 M14_CPA_CPB_like Peptidase M14 Carboxypeptidase A/B-like subfamily: This is one of two main M14 carboxypeptidase subfamilies, defined by sequence and structural homology, the other being N/E. Carboxypeptidases (CPs) hydrolyze single, C-terminal amino acids from polypeptide chains. They have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Majority of the proteins in this subfamily have not been characterized as yet. The A/B enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; the proenzymes are called procarboxypeptidases. These enzymes exhibit distinct substrate specificity pattern; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. There are nine members in the A/B family: CPA1, CPA2, CPA3, CPA4, CPA5,
Probab=28.35 E-value=46 Score=27.16 Aligned_cols=35 Identities=20% Similarity=0.370 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHH
Q 031674 8 TQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIV 44 (155)
Q Consensus 8 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~ 44 (155)
+++.++|+.+-.++|++.+ +...|.|+.|.-++.+
T Consensus 8 ~ei~~~l~~la~~~p~~v~--~~~iG~S~eGR~i~~l 42 (304)
T cd06248 8 EDHLQWLRDLQAAFPNNSE--LFTIGKSYEGRTILGL 42 (304)
T ss_pred HHHHHHHHHHHHHCCCceE--EeceEECCCCCeEEEE
Confidence 5788999999889999754 7888999999866644
No 183
>cd03860 M14_CP_A-B_like The Peptidase M14 Carboxypeptidase (CP) A/B subfamily is one of two main M14 CP subfamilies defined by sequence and structural homology, the other being the N/E subfamily. CPs hydrolyze single, C-terminal amino acids from polypeptide chains. They have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. There are nine members in the A/B family: CPA1, CPA2, CPA3, CPA4, CPA5, CPA6, CPB, CPO and CPU. CPA1, CPA2 and CPB are produced by the
Probab=28.18 E-value=50 Score=26.65 Aligned_cols=34 Identities=24% Similarity=0.407 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHccccCCCCeEEEeeccCccchhH
Q 031674 8 TQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPI 43 (155)
Q Consensus 8 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~ 43 (155)
+++..+|+.+-+.+|++. .+...|.|+.|.-++.
T Consensus 5 ~ei~~~l~~l~~~~p~~~--~~~~iG~S~egr~i~~ 38 (294)
T cd03860 5 DEIYAWLDELAQKYPDLV--TVETIGRSYEGRPIKG 38 (294)
T ss_pred HHHHHHHHHHHHHCCCce--EEEeeeeCCCCCeEEE
Confidence 578889999888899774 4788899999986654
No 184
>cd03863 M14_CPD_II The second carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3.4.17.22), domain II. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, while the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally ac
Probab=27.59 E-value=42 Score=28.37 Aligned_cols=65 Identities=26% Similarity=0.390 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcc--cCCCCCccccceeEecCCCCChhh
Q 031674 8 TQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGI--DAGHKPRMNLKGYMLGNPVTDDKI 76 (155)
Q Consensus 8 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n--~~~~~~~inLkGi~iGng~~d~~~ 76 (155)
+++..||+++-.++|...+ ++..|.|+-|+=++.+ +|-+.. ....++.+-+.|=+=|+=|+.+..
T Consensus 10 ~ei~~~l~~l~~~~P~i~~--l~~IG~S~eGR~I~~l--~Is~~~~~~~~~kp~v~~~g~iHg~E~ig~~~ 76 (375)
T cd03863 10 SDMEIFLRRYANEYPSITR--LYSVGKSVELRELYVM--EISDNPGIHEPGEPEFKYIGNMHGNEVVGREL 76 (375)
T ss_pred HHHHHHHHHHHHHCCCcEE--EEEcccCCccceEEEE--EEecCCCcccCCCCeEEEEccccCCcHHHHHH
Confidence 5788999999899999854 8888999999855544 332211 111235566666666666666643
No 185
>cd03858 M14_CP_N-E_like Carboxypeptidase (CP) N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. The N/E subfamily includes eight members, of which five (CPN, CPE, CPM, CPD, CPZ) are considered enzymatically active, while the other three are non-active (CPX1, PCX2, ACLP/AEBP1) and lack the critical active site and substrate-binding residues considered necessary for CP activity. These non-active members may function as binding proteins or display catalytic activity towards other substrates. Unlike the A/B CP subfamily, enzymes belonging to the N/E subfamily are not produced as inactive precursors that require proteolysis to produce the active form; rather, they rely on their substrate specificity and subcellular compartmentalization to prevent inappr
Probab=27.41 E-value=45 Score=27.87 Aligned_cols=35 Identities=20% Similarity=0.328 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHH
Q 031674 8 TQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIV 44 (155)
Q Consensus 8 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~ 44 (155)
+++..+|+++-..+|+.. .+...|.|+.|+=++.+
T Consensus 5 ~ei~~~l~~l~~~~p~~~--~~~~iG~S~eGR~i~~l 39 (374)
T cd03858 5 AELESFLKEVAANYPNIT--RLYSIGKSVQGRDLWVL 39 (374)
T ss_pred HHHHHHHHHHHHhCCCce--EEEEcccCCCCCEEEEE
Confidence 578899999999999864 48888999999866643
No 186
>cd03869 M14_CPX_like Peptidase M14-like domain of carboxypeptidase (CP)-like protein X (CPX), CPX forms a distinct subgroup of the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Proteins belonging to this subgroup include CP-like protein X1 (CPX1), CP-like protein X2 (CPX2), and aortic CP-like protein (ACLP) and its isoform adipocyte enhancer binding protein-1 (AEBP1). AEBP1 is a truncated form of ACLP, which may arise from alternative splicing of the gene. These proteins are inactive towards standard CP substrates because they lack one or more critical active site and substrate-binding residues that are necessary for activity. They may function as binding proteins rather than as active CPs or display catalytic activity toward other substrates. Pro
Probab=27.21 E-value=82 Score=27.06 Aligned_cols=64 Identities=22% Similarity=0.294 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccC--CCCCccccceeEecCCCCChh
Q 031674 8 TQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDA--GHKPRMNLKGYMLGNPVTDDK 75 (155)
Q Consensus 8 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~--~~~~~inLkGi~iGng~~d~~ 75 (155)
+++..+|+++-+++|+.. .++..|.||-|.=+..+ +|-..... ..++.|-+.|=+=|+=|+.+.
T Consensus 9 ~em~~~L~~la~~yP~i~--~l~sIGkS~EGR~L~~l--~Is~~~~~~~~~kP~v~~~g~iHgrE~ig~~ 74 (405)
T cd03869 9 KDMRQLMKVVNEMCPNIT--RIYNIGKSYQGLKLYAM--EISDNPGEHELGEPEFRYVAGMHGNEVLGRE 74 (405)
T ss_pred HHHHHHHHHHHHHCCCce--EEEEeEECcCCceEEEE--EEecCCccccCCCCeEEEEcccCCCcHHHHH
Confidence 578899999989999985 49999999999854433 33221110 123455555555566666654
No 187
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=27.08 E-value=56 Score=27.25 Aligned_cols=35 Identities=17% Similarity=0.254 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHccccCCCCeEEEeeccCccchhHH
Q 031674 10 IYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIV 44 (155)
Q Consensus 10 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~ 44 (155)
..+.|.-|...-..|-.-.++++|+|-||..+..+
T Consensus 259 ySa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLl 293 (425)
T COG5153 259 YSAALDILGAVRRIYPDARIWLTGHSLGGAIASLL 293 (425)
T ss_pred hHHHHHHHHHHHHhCCCceEEEeccccchHHHHHh
Confidence 34455555555556666789999999999654433
No 188
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=27.08 E-value=56 Score=27.25 Aligned_cols=35 Identities=17% Similarity=0.254 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHccccCCCCeEEEeeccCccchhHH
Q 031674 10 IYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIV 44 (155)
Q Consensus 10 ~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~ 44 (155)
..+.|.-|...-..|-.-.++++|+|-||..+..+
T Consensus 259 ySa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLl 293 (425)
T KOG4540|consen 259 YSAALDILGAVRRIYPDARIWLTGHSLGGAIASLL 293 (425)
T ss_pred hHHHHHHHHHHHHhCCCceEEEeccccchHHHHHh
Confidence 34455555555556666789999999999654433
No 189
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=26.27 E-value=95 Score=27.25 Aligned_cols=45 Identities=13% Similarity=0.096 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHHHHHccccCC-CCeEEEeeccCccchhHHHHHH
Q 031674 4 TLSATQIYHFLRKWLIVHSDFLA-NPLYIAGDSYSGKIVPIVVQEI 48 (155)
Q Consensus 4 ~~~a~d~~~fL~~f~~~fp~~~~-~~~yi~GESYgG~yvP~~a~~i 48 (155)
.+..++...-|+..++..=...+ +++.|.++|-||.|+-++-...
T Consensus 158 ~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~w~ 203 (473)
T KOG2369|consen 158 SEERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLKWV 203 (473)
T ss_pred hhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHHhcc
Confidence 34455666677777776434444 8999999999999987665443
No 190
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=26.16 E-value=1e+02 Score=28.94 Aligned_cols=26 Identities=12% Similarity=0.105 Sum_probs=21.2
Q ss_pred cccCCCCeEEEeeccCccchhHHHHH
Q 031674 22 SDFLANPLYIAGDSYSGKIVPIVVQE 47 (155)
Q Consensus 22 p~~~~~~~yi~GESYgG~yvP~~a~~ 47 (155)
..+...++++.|+|-||.-...++..
T Consensus 550 ~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 550 NVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred cCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 34666799999999999988887754
No 191
>PRK14866 hypothetical protein; Provisional
Probab=25.61 E-value=1.1e+02 Score=26.65 Aligned_cols=47 Identities=17% Similarity=0.159 Sum_probs=31.3
Q ss_pred CChHHHHHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhc
Q 031674 1 MNDTLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDG 51 (155)
Q Consensus 1 ~~d~~~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~ 51 (155)
++|..+++-+...+...+..-++ ..+.+.-+| ||||.|.+...+++.
T Consensus 161 W~d~~a~~~vA~ail~~~~~~~~-~~~~~iG~G---GgHYapr~t~i~le~ 207 (451)
T PRK14866 161 WDDPDAARAVARAILDLRGVPPH-TDRPLVGFG---GGHYAPRQTRIVLET 207 (451)
T ss_pred hCCcHHHHHHHHHHHHHhccccc-CCCEEEEeC---CCCcchhHHHHhhcC
Confidence 35667777777777777663221 113444556 899999999988864
No 192
>PF09851 SHOCT: Short C-terminal domain; InterPro: IPR018649 This family of hypothetical prokaryotic proteins has no known function.
Probab=25.44 E-value=78 Score=16.64 Aligned_cols=20 Identities=25% Similarity=0.282 Sum_probs=15.7
Q ss_pred HHHhhhccccCHHHHHHHHh
Q 031674 82 IQFAYLNALITYEIYKSAKK 101 (155)
Q Consensus 82 ~~~~~~~gli~~~~~~~~~~ 101 (155)
..-++..|+|++..|+..++
T Consensus 8 L~~l~~~G~IseeEy~~~k~ 27 (31)
T PF09851_consen 8 LKELYDKGEISEEEYEQKKA 27 (31)
T ss_pred HHHHHHcCCCCHHHHHHHHH
Confidence 34567899999999987765
No 193
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=24.35 E-value=26 Score=28.82 Aligned_cols=48 Identities=15% Similarity=0.184 Sum_probs=34.8
Q ss_pred HHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCCh
Q 031674 16 KWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDD 74 (155)
Q Consensus 16 ~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~ 74 (155)
.|+...|+.-.+.+.++|+|-||...-.+|. +. -.++.++...|+...
T Consensus 164 d~l~slpevD~~rI~v~G~SqGG~lal~~aa-Ld----------~rv~~~~~~vP~l~d 211 (320)
T PF05448_consen 164 DFLRSLPEVDGKRIGVTGGSQGGGLALAAAA-LD----------PRVKAAAADVPFLCD 211 (320)
T ss_dssp HHHHTSTTEEEEEEEEEEETHHHHHHHHHHH-HS----------ST-SEEEEESESSSS
T ss_pred HHHHhCCCcCcceEEEEeecCchHHHHHHHH-hC----------ccccEEEecCCCccc
Confidence 4667789998889999999999976555544 31 236777887777654
No 194
>PRK09505 malS alpha-amylase; Reviewed
Probab=24.08 E-value=1.4e+02 Score=27.46 Aligned_cols=28 Identities=18% Similarity=0.521 Sum_probs=18.3
Q ss_pred HHHHHHHHHHccc--cCCCCeEEEeeccCc
Q 031674 11 YHFLRKWLIVHSD--FLANPLYIAGDSYSG 38 (155)
Q Consensus 11 ~~fL~~f~~~fp~--~~~~~~yi~GESYgG 38 (155)
..+|.+|-+.+|+ +...+||++||.+++
T Consensus 479 ~~~l~~~k~~~~d~~~~~~~~~~vGEvw~~ 508 (683)
T PRK09505 479 SAALAEWKKANPDKALDDAPFWMTGEAWGH 508 (683)
T ss_pred HHHHHHHHHhccccccccCCeEEEEEecCC
Confidence 3444555555665 344579999999964
No 195
>KOG2650 consensus Zinc carboxypeptidase [Function unknown]
Probab=23.90 E-value=1.2e+02 Score=26.23 Aligned_cols=30 Identities=30% Similarity=0.547 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHccccCCCCeEEEeeccCcc
Q 031674 8 TQIYHFLRKWLIVHSDFLANPLYIAGDSYSGK 39 (155)
Q Consensus 8 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~ 39 (155)
+++++||+....+||+... +...|-||-|.
T Consensus 125 e~I~~~l~~l~~~~P~~v~--~~~IG~s~EgR 154 (418)
T KOG2650|consen 125 EEIYEWLDNLAERYPDLVS--LIHIGRSYEGR 154 (418)
T ss_pred HHHHHHHHHHHHhCCCceE--EEEcccccCCc
Confidence 5788999999999999864 88999999775
No 196
>cd03868 M14_CPD_I The first carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3.4.17.22), domain I. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally active at p
Probab=23.85 E-value=53 Score=27.54 Aligned_cols=35 Identities=14% Similarity=0.179 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHH
Q 031674 8 TQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIV 44 (155)
Q Consensus 8 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~ 44 (155)
+++..+|+++-.++|...+ ++..|.|+.|.=++.+
T Consensus 5 ~ei~~~l~~l~~~~p~~~~--l~~iG~S~eGR~i~~l 39 (372)
T cd03868 5 EELTDLLHSLAKKYPNIAR--LHSIGRSVEGRELWVL 39 (372)
T ss_pred HHHHHHHHHHHHHCCCcEE--EEeccccCCCceEEEE
Confidence 5788999999899999754 7888999999865543
No 197
>cd03870 M14_CPA Peptidase M14 Carboxypeptidase (CP) A (CPA) belongs to the A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPA enzymes generally favor hydrophobic residues. A/B subfamily enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The procarboxypeptidase A (PCPA) is produced by the exocrine pancreas and stored as a stable zymogen in the pancreatic granules until secretion into the digestive tract occurs. This subfamily includes CPA1, CPA2 and CPA4 forms. Within these A forms, there are slightly different specificities, with CPA1 preferring aliphatic and small aromatic residues, and CPA2 p
Probab=23.84 E-value=56 Score=26.71 Aligned_cols=36 Identities=22% Similarity=0.513 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHH
Q 031674 7 ATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIV 44 (155)
Q Consensus 7 a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~ 44 (155)
-+++.++|+.+-.++|++.. +...|.|+-|+=++.+
T Consensus 9 ~~ei~~~l~~L~~~~p~~v~--~~~iG~S~eGR~I~~l 44 (301)
T cd03870 9 LDEIYDFMDLLVAEHPNLVS--KLQIGRSYEGRPIYVL 44 (301)
T ss_pred HHHHHHHHHHHHHHCCCceE--EEecccCCCCCeEEEE
Confidence 36788999999899999854 7888999999876654
No 198
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=23.37 E-value=51 Score=30.55 Aligned_cols=76 Identities=18% Similarity=0.102 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHHHccccCC-CCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCChhhhhHHHHHHh
Q 031674 7 ATQIYHFLRKWLIVHSDFLA-NPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDKIDQNSKIQFA 85 (155)
Q Consensus 7 a~d~~~fL~~f~~~fp~~~~-~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~~~~~~~~~~~~ 85 (155)
.+|.....+.+.+.+ |.. ..+.|+|-||||- ++..++...+ .--+|--+.-+|.+|...-...+.+-
T Consensus 589 v~D~~~~~~~~~~~~--~iD~~ri~i~GwSyGGy----~t~~~l~~~~-----~~~fkcgvavaPVtd~~~yds~~ter- 656 (755)
T KOG2100|consen 589 VKDQIEAVKKVLKLP--FIDRSRVAIWGWSYGGY----LTLKLLESDP-----GDVFKCGVAVAPVTDWLYYDSTYTER- 656 (755)
T ss_pred hHHHHHHHHHHHhcc--cccHHHeEEeccChHHH----HHHHHhhhCc-----CceEEEEEEecceeeeeeecccccHh-
Confidence 355666666666665 544 4699999999995 4444444331 12344445567888876322233222
Q ss_pred hhccccCHHH
Q 031674 86 YLNALITYEI 95 (155)
Q Consensus 86 ~~~gli~~~~ 95 (155)
.+|+-.+..
T Consensus 657 -ymg~p~~~~ 665 (755)
T KOG2100|consen 657 -YMGLPSEND 665 (755)
T ss_pred -hcCCCcccc
Confidence 255554433
No 199
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=22.78 E-value=95 Score=26.22 Aligned_cols=38 Identities=11% Similarity=0.052 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHHccccCCCCeE-EEeeccCccchhHHHHH
Q 031674 7 ATQIYHFLRKWLIVHSDFLANPLY-IAGDSYSGKIVPIVVQE 47 (155)
Q Consensus 7 a~d~~~fL~~f~~~fp~~~~~~~y-i~GESYgG~yvP~~a~~ 47 (155)
.+|+...+..+++. +.-.+++ +.|.|.||.-+-.+|.+
T Consensus 143 ~~d~~~~~~~ll~~---lgi~~~~~vvG~SmGG~ial~~a~~ 181 (389)
T PRK06765 143 ILDFVRVQKELIKS---LGIARLHAVMGPSMGGMQAQEWAVH 181 (389)
T ss_pred HHHHHHHHHHHHHH---cCCCCceEEEEECHHHHHHHHHHHH
Confidence 45666666666654 3334576 99999999877666654
No 200
>cd06246 M14_CPB2 Peptidase M14 Carboxypeptidase (CP) B2 (CPB2, also known as plasma carboxypeptidase B, carboxypeptidase U, and CPU), belongs to the carboxpeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPB2 enzyme displays B-like activity; it only cleaves the basic residues lysine or arginine. It is produced and secreted by the liver as the inactive precursor, procarboxypeptidase U or PCPB2, commonly referred to as thrombin-activatable fibrinolysis inhibitor (TAFI). It circulates in plasma as a zymogen bound to plasminogen, and the active enzyme, TAFIa, inhibits fibrinolysis. It is highly regulated, increased TAFI concentrations are thought to increase the risk of thrombosis and coronary artery disease by reducing fibrinolytic activity whil
Probab=22.74 E-value=59 Score=26.54 Aligned_cols=36 Identities=22% Similarity=0.355 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHH
Q 031674 7 ATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIV 44 (155)
Q Consensus 7 a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~ 44 (155)
-+++.++|+..-.++|++.. ++..|.||-|.=++.+
T Consensus 8 ~~ei~~~l~~l~~~~p~~v~--~~~iG~S~egR~I~~l 43 (300)
T cd06246 8 LNEIYSWIEFITERHSDMLE--KIHIGSSFEKRPLYVL 43 (300)
T ss_pred HHHHHHHHHHHHHHCCCcEE--EEecccCCCCCeEEEE
Confidence 36788999999999999864 8888999999855533
No 201
>PF03283 PAE: Pectinacetylesterase
Probab=22.01 E-value=1.9e+02 Score=24.35 Aligned_cols=58 Identities=14% Similarity=0.105 Sum_probs=37.8
Q ss_pred HHHHHHHHHH-ccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCCh
Q 031674 11 YHFLRKWLIV-HSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDD 74 (155)
Q Consensus 11 ~~fL~~f~~~-fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~ 74 (155)
.+.|...+.. +|+- ..+.|+|.|-||.-+..-+.+|.+.-.. ..+++++.-..-++|.
T Consensus 141 ~avl~~l~~~gl~~a--~~vlltG~SAGG~g~~~~~d~~~~~lp~----~~~v~~~~DsG~f~d~ 199 (361)
T PF03283_consen 141 RAVLDDLLSNGLPNA--KQVLLTGCSAGGLGAILHADYVRDRLPS----SVKVKCLSDSGFFLDN 199 (361)
T ss_pred HHHHHHHHHhcCccc--ceEEEeccChHHHHHHHHHHHHHHHhcc----CceEEEeccccccccc
Confidence 3444444444 4442 4699999999999988888888775532 3556666655555544
No 202
>cd03872 M14_CPA6 Carboxypeptidase (CP) A6 (CPA6, also known as CPAH; EC 3.4.17.1), belongs to the carboxypeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPA6 prefers large hydrophobic C-terminal amino acids as well as histidine, while peptides with a penultimate glycine or proline are very poorly cleaved. Several neuropeptides are processed by CPA6, including Met- and Leu-enkephalin, angiotensin I, and neurotensin. CPA6 converts enkephalin and neurotensin into forms known to be inactive toward their receptors, but converts inactive angiotensin I into the biologically active angiotensin II. Thus, CPA6 plays a possible role in the regulation of neuropeptides in the extracellular environment within the olfactory bulb where it is highly expresse
Probab=21.98 E-value=79 Score=25.87 Aligned_cols=35 Identities=26% Similarity=0.463 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHH
Q 031674 8 TQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIV 44 (155)
Q Consensus 8 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~ 44 (155)
+++..||+..-++||++.+ +...|.||-|.=++.+
T Consensus 6 ~ei~~~l~~L~~~~p~~v~--l~~iG~S~EGR~i~~l 40 (300)
T cd03872 6 EEIESWMFYMNKTHSDLVH--LFSIGKSYEGRSLYVL 40 (300)
T ss_pred HHHHHHHHHHHHHCCCceE--EEEeeecCCCCceEEE
Confidence 5788999999999999865 6777999999866644
No 203
>cd03867 M14_CPZ Peptidase M14-like domain of carboxypeptidase (CP) Z (CPZ), CPZ belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPZ is a secreted Zn-dependent enzyme whose biological function is largely unknown. Unlike other members of the N/E subfamily, CPZ has a bipartite structure, which consists of an N-terminal cysteine-rich domain (CRD) whose sequence is similar to Wnt-binding proteins, and a C-terminal CP catalytic domain that removes C-terminal Arg residues from substrates. CPZ is enriched in the extracellular matrix and is widely distributed during early embryogenesis. That the CRD of CPZ can bind to Wnt4 suggests that CPZ plays a role in Wnt signaling.
Probab=21.92 E-value=88 Score=26.56 Aligned_cols=65 Identities=23% Similarity=0.355 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcc--cCCCCCccccceeEecCCCCChhh
Q 031674 8 TQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGI--DAGHKPRMNLKGYMLGNPVTDDKI 76 (155)
Q Consensus 8 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n--~~~~~~~inLkGi~iGng~~d~~~ 76 (155)
+++++||+.+-.++|++.. ++..|.||-|.=++.+ +|-... ....++.|-+.|=+=|+=|+.+..
T Consensus 5 ~ei~~~l~~la~~~p~~~~--~~~iG~S~EGR~i~~l--~is~~~~~~~~~kp~v~i~~giHg~E~ig~~~ 71 (395)
T cd03867 5 SQMVSVLKRTAARCSHIAR--TYSIGRSFEGRDLLVI--EFSSNPGQHELLEPEVKYIGNMHGNEVLGREL 71 (395)
T ss_pred HHHHHHHHHHHHhCCCceE--EEEccccCCCceEEEE--EeccCCCcccccCCeEEEEccccCCcHHHHHH
Confidence 5788999999889999864 8888999999865543 222211 111124444455444555555543
No 204
>cd06245 M14_CPD_III The third carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3.4.17.22), domain III. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally active a
Probab=21.85 E-value=75 Score=26.71 Aligned_cols=64 Identities=19% Similarity=0.257 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhccc--CCCCCccccceeEecCCCCChh
Q 031674 8 TQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGID--AGHKPRMNLKGYMLGNPVTDDK 75 (155)
Q Consensus 8 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~--~~~~~~inLkGi~iGng~~d~~ 75 (155)
+++..+|+++-+++|.... ++..|.||-|+=++.+ +|-.... ...++.+-+.|=+=|+=|+.+.
T Consensus 6 ~ei~~~l~~l~~~~p~i~~--l~~IG~S~eGR~l~~l--~Is~~~~~~~~~kp~v~~~~giHg~E~ig~e 71 (363)
T cd06245 6 KELSEFLRGLTLNYPHITN--LTSLGQSVEFRPILSL--EISNKPNNSEPEEPKIRFVAGIHGNAPVGTE 71 (363)
T ss_pred HHHHHHHHHHHHHCCCceE--EEEeeecCCCceEEEE--EecCCCCCCCCCCCEEEEECCccCCcHHHHH
Confidence 4688899998888988854 8899999999854433 3322211 1123455555555555555554
No 205
>cd06247 M14_CPO Peptidase M14 carboxypeptidase (CP) O (CPO, also known as metallocarboxypeptidase C; EC 3.4.17.) belongs to the carboxypeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPO has not been well characterized as yet, and little is known about it. Based on modeling studies, CPO has been suggested to have specificity for acidic residues rather than aliphatic/aromatic residues as in A-like enzymes or basic residues as in B-like enzymes. It remains to be demonstrated that CPO is functional as an MCP.
Probab=21.74 E-value=69 Score=26.19 Aligned_cols=35 Identities=14% Similarity=0.231 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHH
Q 031674 8 TQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIV 44 (155)
Q Consensus 8 ~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~ 44 (155)
+.+.++|+++-+++|++.+ +...|.||-|.=++.+
T Consensus 8 ~ei~~~l~~L~~~~p~~v~--l~~iG~S~EgR~I~~l 42 (298)
T cd06247 8 DEIYNWMDQIKEKYSELVS--QHYLGCTYELRPMYYL 42 (298)
T ss_pred HHHHHHHHHHHHHCCCcEE--EEeceECcCCceEEEE
Confidence 5788999999999998854 8888999999866543
No 206
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=21.43 E-value=3.7e+02 Score=20.39 Aligned_cols=45 Identities=16% Similarity=0.095 Sum_probs=28.3
Q ss_pred CCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCC
Q 031674 27 NPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPV 71 (155)
Q Consensus 27 ~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~ 71 (155)
.++++-.-|-||.+.-.--...++..+.......+++|+++=.+-
T Consensus 67 ~~il~H~FSnGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P 111 (240)
T PF05705_consen 67 PPILFHSFSNGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCP 111 (240)
T ss_pred CCEEEEEEECchHHHHHHHHHHHHhcccccccccccceeEEeCCC
Confidence 489999999977665544444444444333334458999874433
No 207
>smart00250 PLEC Plectin repeat.
Probab=21.43 E-value=20 Score=19.72 Aligned_cols=25 Identities=24% Similarity=0.235 Sum_probs=15.5
Q ss_pred CCCChhhhhHHHHHHhhhccccCHH
Q 031674 70 PVTDDKIDQNSKIQFAYLNALITYE 94 (155)
Q Consensus 70 g~~d~~~~~~~~~~~~~~~gli~~~ 94 (155)
|.+||.+...-...=|...|+||..
T Consensus 12 Giidp~t~~~lsv~eA~~~glid~~ 36 (38)
T smart00250 12 GIIDPETGQKLSVEEALRRGLIDPE 36 (38)
T ss_pred EEEcCCCCCCcCHHHHHHcCCCCcc
Confidence 6677765444444556677777754
No 208
>PF03632 Glyco_hydro_65m: Glycosyl hydrolase family 65 central catalytic domain; InterPro: IPR005195 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The family of glycosyl hydrolases (GH65 from CAZY) which contains this domain includes vacuolar acid trehalase and maltose phosphorylase. Maltose phosphorylase (MP) is a dimeric enzyme that catalyzes the conversion of maltose and inorganic phosphate into beta-D-glucose-1-phosphate and glucose. The central domain is the catalytic domain, which binds a phosphate ion that is proximal the the highly conserved Glu. The arrangement of the phosphate and the glutamate is thought to cause nucelophilic attack on the anomeric carbon atom []. The catalytic domain also forms the majority of the dimerisation interface.; GO: 0003824 catalytic activity, 0005975 carbohydrate metabolic process; PDB: 1H54_A.
Probab=21.18 E-value=42 Score=28.37 Aligned_cols=22 Identities=18% Similarity=0.502 Sum_probs=16.3
Q ss_pred EEeeccCccc---------------hhHHHHHHHhcc
Q 031674 31 IAGDSYSGKI---------------VPIVVQEISDGI 52 (155)
Q Consensus 31 i~GESYgG~y---------------vP~~a~~i~~~n 52 (155)
|+||+|.||+ -|.+|+.|++.-
T Consensus 25 Lsge~Y~Gh~FWDtE~~~~P~~~~~~Pe~Ar~lL~YR 61 (370)
T PF03632_consen 25 LSGEGYKGHVFWDTEIFMLPFFLLTHPEAARSLLNYR 61 (370)
T ss_dssp TS-STTTTSB-THHHHCHHHHHHHS-HHHHHHHHHHH
T ss_pred CCCCCcCCeeeecchHHhcchHhhcCHHHHHHHHHHH
Confidence 5699999998 588888887643
No 209
>cd06227 Peptidase_M14-like_2 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe
Probab=20.43 E-value=95 Score=25.00 Aligned_cols=33 Identities=9% Similarity=-0.174 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHHccccCCCCeEEEeeccCccchh
Q 031674 7 ATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVP 42 (155)
Q Consensus 7 a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP 42 (155)
-+++.++|+++-++||. ..++..|.||-|+-++
T Consensus 6 ~~ei~~~l~~l~~~~p~---~~~~~ig~S~egr~i~ 38 (272)
T cd06227 6 TDEINEEADALVKNIRL---SRLGELIESVKVRNFS 38 (272)
T ss_pred HHHHHHHHHHHHHHCCC---cEEeeeeeccCCceee
Confidence 36789999999999999 4677789999998776
No 210
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=20.37 E-value=5.2e+02 Score=21.69 Aligned_cols=57 Identities=16% Similarity=0.306 Sum_probs=37.4
Q ss_pred HHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCC
Q 031674 12 HFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTD 73 (155)
Q Consensus 12 ~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d 73 (155)
..|-+.+....+ -.||+.|.|.|-|+.-|=.--..+.+.... .+=-.-+++|.|...
T Consensus 206 ~~LA~~L~~~~~-G~RpVtLvG~SLGarvI~~cL~~L~~~~~~----~lVe~VvL~Gapv~~ 262 (345)
T PF05277_consen 206 KVLADALLSRNQ-GERPVTLVGHSLGARVIYYCLLELAERKAF----GLVENVVLMGAPVPS 262 (345)
T ss_pred HHHHHHHHHhcC-CCCceEEEeecccHHHHHHHHHHHHhcccc----CeEeeEEEecCCCCC
Confidence 344444444434 678999999999999888888888776332 232234566766544
No 211
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=20.24 E-value=1.8e+02 Score=23.29 Aligned_cols=78 Identities=13% Similarity=0.103 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHHHHccccCCCCeEEEeeccCccchhHHHHHHHhcccCCCCCccccceeEecCCCCChhhhhHHHHHHh
Q 031674 6 SATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDKIDQNSKIQFA 85 (155)
Q Consensus 6 ~a~d~~~fL~~f~~~fp~~~~~~~yi~GESYgG~yvP~~a~~i~~~n~~~~~~~inLkGi~iGng~~d~~~~~~~~~~~~ 85 (155)
.|+|+...+|-|-. ....==-|.|+|=||--+-..|.++.+- +..||+.|=..+-+.|+.+.+ ..+.++.
T Consensus 88 eadDL~sV~q~~s~----~nr~v~vi~gHSkGg~Vvl~ya~K~~d~-----~~viNcsGRydl~~~I~eRlg-~~~l~~i 157 (269)
T KOG4667|consen 88 EADDLHSVIQYFSN----SNRVVPVILGHSKGGDVVLLYASKYHDI-----RNVINCSGRYDLKNGINERLG-EDYLERI 157 (269)
T ss_pred hHHHHHHHHHHhcc----CceEEEEEEeecCccHHHHHHHHhhcCc-----hheEEcccccchhcchhhhhc-ccHHHHH
Confidence 35788777766654 2111235789999999988888888661 236888888888888876554 4466777
Q ss_pred hhccccCH
Q 031674 86 YLNALITY 93 (155)
Q Consensus 86 ~~~gli~~ 93 (155)
-..|+|+-
T Consensus 158 ke~Gfid~ 165 (269)
T KOG4667|consen 158 KEQGFIDV 165 (269)
T ss_pred HhCCceec
Confidence 77777763
Done!