Your job contains 1 sequence.
>031682
MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV
GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGKFM
MVMGMLFRHQMTQACTLQQLRPMGLTLCMAATNNK
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 031682
(155 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q9LEB3 - symbol:RBP47 "Polyadenylate-binding pr... 339 8.8e-31 1
TAIR|locus:2094098 - symbol:RBP47B "RNA-binding protein 4... 339 8.8e-31 1
TAIR|locus:2012211 - symbol:RBP47A "RNA-binding protein 4... 333 3.8e-30 1
TAIR|locus:2015398 - symbol:RBP47C' "RNA-binding protein ... 309 1.3e-27 1
TAIR|locus:2015403 - symbol:RBP47C "RNA-binding protein 4... 300 1.2e-26 1
UNIPROTKB|Q9LEB4 - symbol:RBP45 "Polyadenylate-binding pr... 250 5.0e-21 1
TAIR|locus:2027372 - symbol:RBP45B species:3702 "Arabidop... 247 1.0e-20 1
TAIR|locus:2160210 - symbol:RBP45A "RNA-binding protein 4... 245 1.3e-20 1
TAIR|locus:2116322 - symbol:ATRBP45C species:3702 "Arabid... 240 7.3e-20 1
ASPGD|ASPL0000035772 - symbol:rrmA species:162425 "Emeric... 221 7.8e-18 1
TAIR|locus:2150215 - symbol:AT5G19350 species:3702 "Arabi... 209 2.2e-16 1
POMBASE|SPBC23E6.01c - symbol:SPBC23E6.01c "mRNA processi... 206 6.3e-16 1
POMBASE|SPAC17A2.09c - symbol:csx1 "RNA-binding protein C... 203 2.4e-15 1
SGD|S000001128 - symbol:NAM8 "RNA binding protein, compon... 158 9.1e-13 2
CGD|CAL0004999 - symbol:orf19.6790 species:5476 "Candida ... 137 2.2e-12 2
UNIPROTKB|G4NFS0 - symbol:MGG_08741 "tRNA selenocysteine-... 167 8.4e-12 1
SGD|S000000416 - symbol:NGR1 "RNA binding protein that ne... 145 8.9e-12 2
ZFIN|ZDB-GENE-040426-2298 - symbol:rbm22 "RNA binding mot... 128 1.5e-07 1
UNIPROTKB|F1P368 - symbol:DAZL "Deleted in azoospermia-li... 121 4.1e-07 1
UNIPROTKB|Q804A9 - symbol:DAZL "Deleted in azoospermia-li... 121 4.1e-07 1
ZFIN|ZDB-GENE-030131-2167 - symbol:tia1l "cytotoxic granu... 120 7.6e-07 1
TAIR|locus:2172144 - symbol:AT5G54580 species:3702 "Arabi... 113 7.8e-07 1
UNIPROTKB|J9P972 - symbol:DAZAP1 "Uncharacterized protein... 117 8.8e-07 1
UNIPROTKB|E7EV40 - symbol:DAZL "Deleted in azoospermia-li... 114 9.0e-07 1
WB|WBGene00022235 - symbol:sqd-1 species:6239 "Caenorhabd... 118 1.0e-06 1
UNIPROTKB|F1P555 - symbol:SFPQ "Uncharacterized protein" ... 105 1.4e-06 2
UNIPROTKB|G4MVL2 - symbol:MGG_08898 "Differentiation regu... 122 1.7e-06 1
UNIPROTKB|F1NMD7 - symbol:RBM22 "Pre-mRNA-splicing factor... 118 1.8e-06 1
UNIPROTKB|Q5ZM16 - symbol:RBM22 "Pre-mRNA-splicing factor... 118 1.8e-06 1
RGD|1305770 - symbol:Rbm22 "RNA binding motif protein 22"... 118 1.8e-06 1
UNIPROTKB|F5GWK3 - symbol:RBM22 "Pre-mRNA-splicing factor... 117 1.9e-06 1
UNIPROTKB|I3LPX5 - symbol:LOC100625706 "Uncharacterized p... 115 2.0e-06 1
UNIPROTKB|F2Z4G3 - symbol:RBM22 "Pre-mRNA-splicing factor... 117 2.3e-06 1
UNIPROTKB|Q3B7L8 - symbol:RBM22 "Pre-mRNA-splicing factor... 117 2.3e-06 1
UNIPROTKB|Q9NW64 - symbol:RBM22 "Pre-mRNA-splicing factor... 117 2.3e-06 1
UNIPROTKB|Q4R4J1 - symbol:RBM22 "Pre-mRNA-splicing factor... 117 2.3e-06 1
UNIPROTKB|Q5RAY5 - symbol:RBM22 "Pre-mRNA-splicing factor... 117 2.3e-06 1
MGI|MGI:1914060 - symbol:Rbm22 "RNA binding motif protein... 117 2.3e-06 1
UNIPROTKB|D4A0P8 - symbol:Dazl "Protein Dazl" species:101... 114 2.3e-06 1
UNIPROTKB|E2RG35 - symbol:RBM22 "Uncharacterized protein"... 117 2.3e-06 1
UNIPROTKB|F6S8J2 - symbol:DAZ4 "Deleted in azoospermia pr... 115 2.6e-06 1
UNIPROTKB|E7EUF4 - symbol:DAZ3 "Deleted in azoospermia pr... 115 2.6e-06 1
MGI|MGI:1342328 - symbol:Dazl "deleted in azoospermia-lik... 114 2.6e-06 1
RGD|1591714 - symbol:Dazl "deleted in azoospermia-like" s... 114 2.6e-06 1
UNIPROTKB|I3LRX5 - symbol:TIA1 "Uncharacterized protein" ... 111 2.6e-06 1
UNIPROTKB|E7ETJ9 - symbol:TIAL1 "Nucleolysin TIAR" specie... 108 2.6e-06 1
UNIPROTKB|E7EN82 - symbol:DAZ2 "Deleted in azoospermia pr... 115 3.0e-06 1
UNIPROTKB|E7EU98 - symbol:DAZ3 "Deleted in azoospermia pr... 115 3.0e-06 1
UNIPROTKB|Q49AS9 - symbol:TIAL1 "Nucleolysin TIAR" specie... 112 3.0e-06 1
UNIPROTKB|E7ETR3 - symbol:DAZ3 "Deleted in azoospermia pr... 115 3.0e-06 1
UNIPROTKB|E7EU30 - symbol:DAZ4 "Deleted in azoospermia pr... 115 3.0e-06 1
UNIPROTKB|E7EU39 - symbol:DAZ2 "Deleted in azoospermia pr... 115 3.0e-06 1
UNIPROTKB|E7ENA5 - symbol:DAZ4 "Deleted in azoospermia pr... 115 3.3e-06 1
UNIPROTKB|Q92904 - symbol:DAZL "Deleted in azoospermia-li... 113 3.3e-06 1
UNIPROTKB|E7ERQ6 - symbol:DAZ3 "Deleted in azoospermia pr... 115 3.4e-06 1
UNIPROTKB|E7EU33 - symbol:DAZ4 "Deleted in azoospermia pr... 115 3.4e-06 1
ASPGD|ASPL0000065382 - symbol:AN7480 species:162425 "Emer... 119 3.6e-06 1
UNIPROTKB|Q6P616 - symbol:rbm22 "Pre-mRNA-splicing factor... 115 3.8e-06 1
DICTYBASE|DDB_G0277875 - symbol:ssbA "ssRNA-binding prote... 112 4.0e-06 1
UNIPROTKB|E7ENA6 - symbol:DAZ2 "Deleted in azoospermia pr... 115 4.1e-06 1
MGI|MGI:107914 - symbol:Tia1 "cytotoxic granule-associate... 114 4.2e-06 1
TAIR|locus:2025077 - symbol:MAC5A "MOS4-associated comple... 115 4.7e-06 1
UNIPROTKB|I3L0B6 - symbol:DAZ2 "Deleted in azoospermia pr... 115 4.8e-06 1
UNIPROTKB|Q9NR90 - symbol:DAZ3 "Deleted in azoospermia pr... 115 4.8e-06 1
UNIPROTKB|K7EQ02 - symbol:DAZAP1 "DAZ-associated protein ... 109 4.8e-06 1
UNIPROTKB|F1SF34 - symbol:F1SF34 "Uncharacterized protein... 110 4.9e-06 1
ZFIN|ZDB-GENE-000405-6 - symbol:dazl "deleted in azoosper... 109 5.0e-06 1
UNIPROTKB|E9PTS0 - symbol:Hnrnpab "Protein Hnrnpab" speci... 102 5.5e-06 2
UNIPROTKB|Q13117 - symbol:DAZ2 "Deleted in azoospermia pr... 115 5.8e-06 1
UNIPROTKB|Q86SG3 - symbol:DAZ4 "Deleted in azoospermia pr... 115 6.1e-06 1
UNIPROTKB|Q7ZXB5 - symbol:rbm22 "Pre-mRNA-splicing factor... 113 6.2e-06 1
UNIPROTKB|D4A964 - symbol:Tial1 "Protein Tial1" species:1... 112 6.5e-06 1
UNIPROTKB|F5H3W3 - symbol:DAZ2 "Deleted in azoospermia pr... 115 6.5e-06 1
UNIPROTKB|F1LQ36 - symbol:Tial1 "Protein Tial1" species:1... 112 6.6e-06 1
UNIPROTKB|Q1RMF9 - symbol:DAZ1 "DAZ1 protein" species:960... 115 6.6e-06 1
UNIPROTKB|Q01085 - symbol:TIAL1 "Nucleolysin TIAR" specie... 112 6.7e-06 1
RGD|1305742 - symbol:Tia1 "TIA1 cytotoxic granule-associa... 112 6.7e-06 1
UNIPROTKB|F2Z4H8 - symbol:TIAL1 "Uncharacterized protein"... 112 6.8e-06 1
UNIPROTKB|D4A6U8 - symbol:Tia1 "Protein Tia1" species:101... 112 6.9e-06 1
UNIPROTKB|F1NY49 - symbol:374274 "Uncharacterized protein... 112 7.1e-06 1
UNIPROTKB|A3DUJ0 - symbol:DAZL "Deleted in azoospermia-li... 110 7.1e-06 1
UNIPROTKB|J9NTC5 - symbol:DAZL "Uncharacterized protein" ... 110 7.1e-06 1
UNIPROTKB|F1NS94 - symbol:374274 "Uncharacterized protein... 112 7.1e-06 1
UNIPROTKB|E9PBY2 - symbol:DAZ2 "Deleted in azoospermia pr... 115 7.2e-06 1
UNIPROTKB|E2RA41 - symbol:TIAL1 "Uncharacterized protein"... 112 7.2e-06 1
UNIPROTKB|F2Z5F9 - symbol:LOC100736782 "Uncharacterized p... 112 7.2e-06 1
MGI|MGI:107913 - symbol:Tial1 "Tia1 cytotoxic granule-ass... 112 7.2e-06 1
RGD|1595845 - symbol:Tial1 "Tia1 cytotoxic granule-associ... 112 7.2e-06 1
TAIR|locus:2043157 - symbol:MAC5B "MOS4-associated comple... 113 7.7e-06 1
TAIR|locus:2129590 - symbol:AT4G14300 species:3702 "Arabi... 112 7.8e-06 1
UNIPROTKB|Q98SJ2 - symbol:dazap1 "DAZ-associated protein ... 111 8.0e-06 1
UNIPROTKB|C9IZL7 - symbol:NONO "Non-POU domain-containing... 106 8.2e-06 1
UNIPROTKB|Q800W4 - symbol:TIA1 "Uncharacterized protein" ... 111 8.4e-06 1
UNIPROTKB|Q9NQZ3 - symbol:DAZ1 "Deleted in azoospermia pr... 115 8.5e-06 1
UNIPROTKB|Q0VBZ6 - symbol:TIA1 "TIA1 cytotoxic granule-as... 111 8.9e-06 1
UNIPROTKB|F8W8I6 - symbol:TIA1 "Nucleolysin TIA-1 isoform... 111 8.9e-06 1
UNIPROTKB|D6RBQ9 - symbol:HNRNPD "Heterogeneous nuclear r... 103 9.0e-06 1
UNIPROTKB|Q83D11 - symbol:CBU_0935 "RNA binding protein" ... 103 9.0e-06 1
TIGR_CMR|CBU_0935 - symbol:CBU_0935 "RNA-binding protein"... 103 9.0e-06 1
UNIPROTKB|P31483 - symbol:TIA1 "Nucleolysin TIA-1 isoform... 111 9.0e-06 1
WARNING: Descriptions of 101 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|Q9LEB3 [details] [associations]
symbol:RBP47 "Polyadenylate-binding protein RBP47"
species:4092 "Nicotiana plumbaginifolia" [GO:0005634 "nucleus"
evidence=IDA] [GO:0008143 "poly(A) RNA binding" evidence=IDA]
[GO:0010494 "cytoplasmic stress granule" evidence=IDA] [GO:0034605
"cellular response to heat" evidence=IDA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0034605 GO:GO:0000166 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0010494 GO:GO:0008143 HSSP:P33240
EMBL:AJ292768 ProteinModelPortal:Q9LEB3 Uniprot:Q9LEB3
Length = 428
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 71/122 (58%), Positives = 81/122 (66%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKXXX----XXXXXXXXXXXASNGAPGQGPQSEGDSSNT 56
MTEMNGVYCSSR MRIG ATP+K ASNGA G QS+GDSSNT
Sbjct: 236 MTEMNGVYCSSRAMRIGVATPKKPSAHEQYSSQAVILSGGYASNGAATHGSQSDGDSSNT 295
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTME 116
TIFVGGLD VTDE+LRQ F+Q+GE+ SVKIP GKGCGFVQF++ AI + +
Sbjct: 296 TIFVGGLDSEVTDEELRQSFNQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAII 355
Query: 117 GK 118
GK
Sbjct: 356 GK 357
>TAIR|locus:2094098 [details] [associations]
symbol:RBP47B "RNA-binding protein 47B" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0008143 "poly(A) RNA binding" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0042991 "transcription
factor import into nucleus" evidence=RCA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005829 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0034605 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
EMBL:AP000419 GO:GO:0010494 eggNOG:COG0724 HSSP:P09651
GO:GO:0008143 HOGENOM:HOG000186228 EMBL:AK226472 EMBL:BT026489
EMBL:AY084821 IPI:IPI00522174 IPI:IPI00785888 RefSeq:NP_188544.1
UniGene:At.8226 ProteinModelPortal:Q0WW84 SMR:Q0WW84 STRING:Q0WW84
PaxDb:Q0WW84 PRIDE:Q0WW84 EnsemblPlants:AT3G19130.1 GeneID:821447
KEGG:ath:AT3G19130 TAIR:At3g19130 InParanoid:Q0WW84 OMA:RAVENGP
PhylomeDB:Q0WW84 ProtClustDB:CLSN2913615 Genevestigator:Q0WW84
Uniprot:Q0WW84
Length = 435
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 67/123 (54%), Positives = 83/123 (67%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKXXX-----XXXXXXXXXXXASNGAPGQGPQSEGDSSN 55
+TEMNG YCS+R MR+G ATP++ SNG+ G G QS+G+S+N
Sbjct: 261 LTEMNGAYCSNRQMRVGIATPKRAIANQQQHSSQAVILAGGHGSNGSMGYGSQSDGESTN 320
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTM 115
TIFVGG+DP+V DEDLRQPFSQ+GE+ SVKIPVGKGCGFVQFA+ AI + T+
Sbjct: 321 ATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKIPVGKGCGFVQFADRKSAEDAIESLNGTV 380
Query: 116 EGK 118
GK
Sbjct: 381 IGK 383
>TAIR|locus:2012211 [details] [associations]
symbol:RBP47A "RNA-binding protein 47A" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=ISS] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634 GO:GO:0034605
GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0010494
EMBL:AC011807 eggNOG:COG0724 GO:GO:0008143 HSSP:Q14103
IPI:IPI00529085 IPI:IPI01019950 PIR:F96532 RefSeq:NP_175383.1
UniGene:At.23595 ProteinModelPortal:F4I3B3 SMR:F4I3B3 IntAct:F4I3B3
PRIDE:F4I3B3 EnsemblPlants:AT1G49600.1 GeneID:841384
KEGG:ath:AT1G49600 TAIR:At1g49600 OMA:KLLAIHQ Uniprot:F4I3B3
Length = 445
Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 64/118 (54%), Positives = 79/118 (66%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKXXXXXXXXXXXXXXASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG +CSSR MR+G ATP++ + G G G S+G+S+N+TIFV
Sbjct: 272 MTEMNGAFCSSRQMRVGIATPKRAAAYGQQNGSQALTLAGGHGGNGSMSDGESNNSTIFV 331
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGK 118
GGLD +VT+EDL QPFS +GE+ SVKIPVGKGCGFVQFAN AI + T+ GK
Sbjct: 332 GGLDADVTEEDLMQPFSDFGEVVSVKIPVGKGCGFVQFANRQSAEEAIGNLNGTVIGK 389
>TAIR|locus:2015398 [details] [associations]
symbol:RBP47C' "RNA-binding protein 47C'" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0003723 "RNA binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0008143
"poly(A) RNA binding" evidence=ISS] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0034605
GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0010494
EMBL:AC007519 GO:GO:0008143 HSSP:Q14103 HOGENOM:HOG000186228
EMBL:AK227406 EMBL:BT030029 IPI:IPI00530631 PIR:C96515
RefSeq:NP_175181.1 UniGene:At.22563 UniGene:At.64064
ProteinModelPortal:Q9SX80 SMR:Q9SX80 PRIDE:Q9SX80
EnsemblPlants:AT1G47500.1 GeneID:841159 KEGG:ath:AT1G47500
TAIR:At1g47500 InParanoid:Q9SX80 OMA:FANDIRP PhylomeDB:Q9SX80
ProtClustDB:CLSN2681931 Genevestigator:Q9SX80 Uniprot:Q9SX80
Length = 434
Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 68/118 (57%), Positives = 77/118 (65%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKXXXXXXXXXXXXXXASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGV CSSR MRIG ATPRK A +SEGD+ NTTIFV
Sbjct: 258 MTEMNGVKCSSRAMRIGPATPRKTNGYQQQGGYMPSGAFT-------RSEGDTINTTIFV 310
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGK 118
GGLD +VTDEDL+QPFS++GEI SVKIPVGKGCGFVQF N A+ + T+ GK
Sbjct: 311 GGLDSSVTDEDLKQPFSEFGEIVSVKIPVGKGCGFVQFVNRPNAEEALEKLNGTVIGK 368
>TAIR|locus:2015403 [details] [associations]
symbol:RBP47C "RNA-binding protein 47C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0003723 "RNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0008143 "poly(A) RNA binding"
evidence=ISS] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0034605 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0010494 EMBL:AC007519
eggNOG:COG0724 GO:GO:0008143 HSSP:Q14103 HOGENOM:HOG000186228
UniGene:At.22563 ProtClustDB:CLSN2681931 EMBL:AF344325
EMBL:AY035180 EMBL:AY062960 EMBL:BX813781 IPI:IPI00519360
IPI:IPI00543304 PIR:B96515 RefSeq:NP_175180.1 RefSeq:NP_973984.1
ProteinModelPortal:Q9SX79 SMR:Q9SX79 PRIDE:Q9SX79
EnsemblPlants:AT1G47490.1 GeneID:841157 KEGG:ath:AT1G47490
TAIR:At1g47490 InParanoid:Q9SX79 OMA:IWVGDLH PhylomeDB:Q9SX79
Genevestigator:Q9SX79 Uniprot:Q9SX79
Length = 432
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 68/118 (57%), Positives = 77/118 (65%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKXXXXXXXXXXXXXXASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGV CSSR MRIG ATPRK NG + P EGD NTTIFV
Sbjct: 256 MTEMNGVKCSSRAMRIGPATPRKTNGYQQQGGYM----PNGTLTR-P--EGDIMNTTIFV 308
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGK 118
GGLD +VTDEDL+QPF+++GEI SVKIPVGKGCGFVQF N A+ + T+ GK
Sbjct: 309 GGLDSSVTDEDLKQPFNEFGEIVSVKIPVGKGCGFVQFVNRPNAEEALEKLNGTVIGK 366
>UNIPROTKB|Q9LEB4 [details] [associations]
symbol:RBP45 "Polyadenylate-binding protein RBP45"
species:4092 "Nicotiana plumbaginifolia" [GO:0005634 "nucleus"
evidence=IDA] [GO:0008143 "poly(A) RNA binding" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0000166 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0008143 EMBL:AJ292767 HSSP:O08583
ProteinModelPortal:Q9LEB4 Uniprot:Q9LEB4
Length = 409
Score = 250 (93.1 bits), Expect = 5.0e-21, P = 5.0e-21
Identities = 58/117 (49%), Positives = 67/117 (57%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKXXXXXXXXXXXXXXASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGV CS+RPMRIG A +K A+ P Q Q E D +NTTIFV
Sbjct: 235 MTEMNGVLCSTRPMRIGPAANKKPVGTPQK-------ATYQNP-QATQGESDPNNTTIFV 286
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEG 117
GGLDP V +E LRQ FS YGE+ VKI GK CGFVQF A++ + T G
Sbjct: 287 GGLDPTVAEEHLRQVFSPYGELVHVKIVAGKRCGFVQFGTRASAEQALSSLNGTQLG 343
>TAIR|locus:2027372 [details] [associations]
symbol:RBP45B species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0003723 "RNA binding" evidence=ISS;IDA] [GO:0005634 "nucleus"
evidence=ISS] [GO:0008143 "poly(A) RNA binding" evidence=ISS]
[GO:0010193 "response to ozone" evidence=IEP] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=RCA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0010193 EMBL:AC007296
HSSP:P19339 eggNOG:COG0724 GO:GO:0008143 HOGENOM:HOG000186228
EMBL:AY093201 EMBL:BT008494 EMBL:AK318868 EMBL:AY086969
IPI:IPI00523017 IPI:IPI00536746 PIR:H86249 RefSeq:NP_172630.1
RefSeq:NP_849641.1 UniGene:At.19842 ProteinModelPortal:Q9SAB3
SMR:Q9SAB3 IntAct:Q9SAB3 PRIDE:Q9SAB3 EnsemblPlants:AT1G11650.2
GeneID:837708 KEGG:ath:AT1G11650 TAIR:At1g11650 InParanoid:Q9SAB3
OMA:PQAHYGQ PhylomeDB:Q9SAB3 ProtClustDB:CLSN2682179
Genevestigator:Q9SAB3 Uniprot:Q9SAB3
Length = 405
Score = 247 (92.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 57/114 (50%), Positives = 71/114 (62%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKXXXXXXXXXXXXXXASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGV CS+RPMRIG A +K S+ A G ++ D +NTT+FV
Sbjct: 214 MTEMNGVPCSTRPMRIGPAASKKGVTGQRDSYQ-----SSAA---GVTTDNDPNNTTVFV 265
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN-SLGQ--IMAINGV 111
GGLD +VTD+ L+ FSQYGEI VKIP GK CGFVQF+ S + + +NGV
Sbjct: 266 GGLDASVTDDHLKNVFSQYGEIVHVKIPAGKRCGFVQFSEKSCAEEALRMLNGV 319
>TAIR|locus:2160210 [details] [associations]
symbol:RBP45A "RNA-binding protein 45A" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0008143 "poly(A) RNA binding" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009220 "pyrimidine
ribonucleotide biosynthetic process" evidence=RCA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005829 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000166 GO:GO:0006397
Gene3D:3.30.70.330 eggNOG:COG0724 EMBL:AB005232 GO:GO:0008143
HSSP:Q61474 HOGENOM:HOG000186228 EMBL:AF324983 EMBL:BT029545
IPI:IPI00522054 RefSeq:NP_568815.1 UniGene:At.19141
ProteinModelPortal:Q9FPJ8 SMR:Q9FPJ8 IntAct:Q9FPJ8 STRING:Q9FPJ8
PRIDE:Q9FPJ8 EnsemblPlants:AT5G54900.1 GeneID:835581
KEGG:ath:AT5G54900 TAIR:At5g54900 InParanoid:Q9FPJ8 OMA:EARTLWI
PhylomeDB:Q9FPJ8 ProtClustDB:CLSN2917762 Genevestigator:Q9FPJ8
Uniprot:Q9FPJ8
Length = 387
Score = 245 (91.3 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 54/117 (46%), Positives = 68/117 (58%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKXXXXXXXXXXXXXXASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG YCS+RPMRIG A + A+ G + D +NTTIFV
Sbjct: 213 MTEMNGQYCSTRPMRIGPAANKNALPMQPAMYQNTQGANAG--------DNDPNNTTIFV 264
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEG 117
GGLD NVTD++L+ F Q+GE+ VKIP GK CGFVQ+AN A++ + T G
Sbjct: 265 GGLDANVTDDELKSIFGQFGELLHVKIPPGKRCGFVQYANKASAEHALSVLNGTQLG 321
>TAIR|locus:2116322 [details] [associations]
symbol:ATRBP45C species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=RCA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005829
GO:GO:0005634 EMBL:CP002687 EMBL:AL161566 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 EMBL:AL035440 HSSP:P19339
GO:GO:0008143 OMA:YANRACA HOGENOM:HOG000186228 EMBL:AF370339
EMBL:AY054487 EMBL:AY062999 EMBL:AY093292 IPI:IPI00516600
PIR:T04823 RefSeq:NP_567764.1 UniGene:At.47594 UniGene:At.67098
UniGene:At.67775 ProteinModelPortal:Q93W34 SMR:Q93W34 IntAct:Q93W34
STRING:Q93W34 PRIDE:Q93W34 EnsemblPlants:AT4G27000.1 GeneID:828808
KEGG:ath:AT4G27000 TAIR:At4g27000 ProtClustDB:CLSN2917618
Genevestigator:Q93W34 Uniprot:Q93W34
Length = 415
Score = 240 (89.5 bits), Expect = 7.3e-20, P = 7.3e-20
Identities = 53/117 (45%), Positives = 66/117 (56%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKXXXXXXXXXXXXXXASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG YCSSRPMR G A +K QG E D +NTTIFV
Sbjct: 232 MTEMNGQYCSSRPMRTGPAANKKPLTMQPASYQNT---------QGNSGESDPTNTTIFV 282
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEG 117
G +D +VT++DL+ F Q+GE+ VKIP GK CGFVQ+AN A++ + T G
Sbjct: 283 GAVDQSVTEDDLKSVFGQFGELVHVKIPAGKRCGFVQYANRACAEQALSVLNGTQLG 339
>ASPGD|ASPL0000035772 [details] [associations]
symbol:rrmA species:162425 "Emericella nidulans"
[GO:0006527 "arginine catabolic process" evidence=IMP] [GO:0003729
"mRNA binding" evidence=ISS] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 EMBL:BN001306
GO:GO:0003676 eggNOG:COG0724 OrthoDB:EOG44BFB8 EMBL:AACD01000169
HOGENOM:HOG000186228 OMA:PQAHYGQ RefSeq:XP_682359.1
ProteinModelPortal:Q5ARJ0 STRING:Q5ARJ0
EnsemblFungi:CADANIAT00009524 GeneID:2868083 KEGG:ani:AN9090.2
Uniprot:Q5ARJ0
Length = 393
Score = 221 (82.9 bits), Expect = 7.8e-18, P = 7.8e-18
Identities = 54/121 (44%), Positives = 65/121 (53%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKXXXXXXXXXXXXXXASN-----GAPGQG----PQSEG 51
++EM GVYC +RPMRI ATP+ + GAP G PQ
Sbjct: 219 LSEMQGVYCGNRPMRISTATPKNKGPGVVPGGMGMPGPAGMYPPMGAPPMGFYGAPQPMN 278
Query: 52 ---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF MAI
Sbjct: 279 QFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAI 338
Query: 109 N 109
N
Sbjct: 339 N 339
>TAIR|locus:2150215 [details] [associations]
symbol:AT5G19350 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0003723 "RNA binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0008143 "poly(A) RNA binding" evidence=ISS]
[GO:0010048 "vernalization response" evidence=RCA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0034605 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
EMBL:AF296837 GO:GO:0010494 GO:GO:0008143 HSSP:Q14103 EMBL:AY074319
EMBL:AY114004 IPI:IPI00526390 IPI:IPI00846741 RefSeq:NP_001078604.1
RefSeq:NP_197436.1 UniGene:At.31302 ProteinModelPortal:Q8VXZ9
SMR:Q8VXZ9 PRIDE:Q8VXZ9 EnsemblPlants:AT5G19350.1 GeneID:832055
KEGG:ath:AT5G19350 TAIR:At5g19350 HOGENOM:HOG000186228
InParanoid:Q8VXZ9 OMA:NGTQMPG PhylomeDB:Q8VXZ9
ProtClustDB:CLSN2693583 Genevestigator:Q8VXZ9 Uniprot:Q8VXZ9
Length = 425
Score = 209 (78.6 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 49/105 (46%), Positives = 61/105 (58%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKXXXXXXXXXXXXXX-----ASNGAPGQG--PQSEGDS 53
M EMNG+YCS+RPMRI AATP+K ++ AP Q E D
Sbjct: 175 MAEMNGLYCSTRPMRISAATPKKNVGVQQQYVTKAVYPVTVPSAVAAPVQAYVAPPESDV 234
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF 98
+ TTI V LD NVT+E+L++ FSQ GE+ VKIP KG G+VQF
Sbjct: 235 TCTTISVANLDQNVTEEELKKAFSQLGEVIYVKIPATKGYGYVQF 279
>POMBASE|SPBC23E6.01c [details] [associations]
symbol:SPBC23E6.01c "mRNA processing factor
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000932
"cytoplasmic mRNA processing body" evidence=ISO] [GO:0003729 "mRNA
binding" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0070935 "3'-UTR-mediated mRNA stabilization" evidence=ISO]
[GO:0071004 "U2-type prespliceosome" evidence=ISO]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 PomBase:SPBC23E6.01c GO:GO:0005829 GO:GO:0000166
EMBL:CU329671 GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0000932
eggNOG:COG0724 GO:GO:0071004 OrthoDB:EOG44BFB8 GO:GO:0070935
HOGENOM:HOG000186228 RefSeq:NP_596601.2 ProteinModelPortal:O60176
STRING:O60176 EnsemblFungi:SPBC23E6.01c.1 GeneID:2540551
KEGG:spo:SPBC23E6.01c OMA:HEASSAM NextBio:20801677 Uniprot:O60176
Length = 473
Score = 206 (77.6 bits), Expect = 6.3e-16, P = 6.3e-16
Identities = 46/112 (41%), Positives = 61/112 (54%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KXXXXXXXXXXXXXXASNG--APGQGPQSEGDSSNTT 57
+ EM G C RP+R+G ATP+ K G + Q D++N+T
Sbjct: 245 LAEMQGQICGDRPIRVGLATPKSKAHVFSPVNVVPVSMPPVGFYSAAQPVPQFADTANST 304
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAIN 109
+FVGGL V++E+L+ F +GEI VKIP GKGCGFVQF N +AIN
Sbjct: 305 VFVGGLSKFVSEEELKYLFQNFGEIVYVKIPPGKGCGFVQFVNRQSAEIAIN 356
>POMBASE|SPAC17A2.09c [details] [associations]
symbol:csx1 "RNA-binding protein Csx1" species:4896
"Schizosaccharomyces pombe" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISO] [GO:0003729 "mRNA binding"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0070935 "3'-UTR-mediated mRNA
stabilization" evidence=ISO] [GO:2000815 "regulation of mRNA
stability involved in response to oxidative stress" evidence=IMP]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 PomBase:SPAC17A2.09c GO:GO:0005829 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0000166 GO:GO:0003729
Gene3D:3.30.70.330 GO:GO:0000932 eggNOG:COG0724 GO:GO:2000815
EMBL:D83417 EMBL:D83418 PIR:T37810 RefSeq:NP_594243.1
ProteinModelPortal:O13759 IntAct:O13759 MINT:MINT-4667695
STRING:O13759 EnsemblFungi:SPAC17A2.09c.1 GeneID:2542151
KEGG:spo:SPAC17A2.09c OrthoDB:EOG44BFB8 NextBio:20803223
GO:GO:0070935 Uniprot:O13759
Length = 632
Score = 203 (76.5 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 46/119 (38%), Positives = 62/119 (52%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKXXXXXXXXXXXX--XXASNGAPGQGPQSEGDSSNTTI 58
+ M G C RP+RI A+P+ SN P Q S D NTT+
Sbjct: 241 LMHMQGYLCQGRPLRISVASPKSRASIAADSALGIVPTSTSNRQPNQDLCSM-DPLNTTV 299
Query: 59 FVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEG 117
FVGGL N++++DL+ F +G I ++KIP GKGCGFVQ++ AIN TM+G
Sbjct: 300 FVGGLASNLSEKDLQVCFQPFGRILNIKIPFGKGCGFVQYSEKSAAEKAIN----TMQG 354
>SGD|S000001128 [details] [associations]
symbol:NAM8 "RNA binding protein, component of the U1 snRNP
protein" species:4932 "Saccharomyces cerevisiae" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA;IPI] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0071004 "U2-type prespliceosome" evidence=IDA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IPI] [GO:0005685 "U1
snRNP" evidence=IDA] [GO:0003729 "mRNA binding" evidence=IPI]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0000243 "commitment complex"
evidence=IPI] [GO:0006376 "mRNA splice site selection"
evidence=IMP] [GO:0048026 "positive regulation of mRNA splicing,
via spliceosome" evidence=IMP] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
SGD:S000001128 GO:GO:0005739 GO:GO:0000166 EMBL:BK006934
GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0000243 eggNOG:COG0724
GO:GO:0048026 GO:GO:0006376 GO:GO:0071004 OrthoDB:EOG44BFB8
EMBL:U00060 GO:GO:0005685 EMBL:X64763 EMBL:D11461 PIR:S46720
RefSeq:NP_011954.1 ProteinModelPortal:Q00539 SMR:Q00539
DIP:DIP-2749N IntAct:Q00539 MINT:MINT-612683 STRING:Q00539
PaxDb:Q00539 PeptideAtlas:Q00539 EnsemblFungi:YHR086W GeneID:856486
KEGG:sce:YHR086W CYGD:YHR086w GeneTree:ENSGT00510000047100
HOGENOM:HOG000066109 OMA:MNTGMNT NextBio:982182
Genevestigator:Q00539 GermOnline:YHR086W Uniprot:Q00539
Length = 523
Score = 158 (60.7 bits), Expect = 9.1e-13, Sum P(2) = 9.1e-13
Identities = 31/60 (51%), Positives = 41/60 (68%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
D +NTT+F+GGL VT+++LR F +G I VKIPVGK CGFVQ+ + L AI G+
Sbjct: 309 DPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKCCGFVQYVDRLSAEAAIAGM 368
Score = 42 (19.8 bits), Expect = 9.1e-13, Sum P(2) = 9.1e-13
Identities = 6/17 (35%), Positives = 13/17 (76%)
Query: 1 MTEMNGVYCSSRPMRIG 17
++EM GV+ + R +++G
Sbjct: 222 LSEMQGVFLNGRAIKVG 238
>CGD|CAL0004999 [details] [associations]
symbol:orf19.6790 species:5476 "Candida albicans" [GO:0010494
"cytoplasmic stress granule" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0061158 "3'-UTR-mediated mRNA destabilization"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 CGD:CAL0004999 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 eggNOG:COG0724 EMBL:AACQ01000029 EMBL:AACQ01000028
RefSeq:XP_719769.1 RefSeq:XP_719886.1 ProteinModelPortal:Q5ADQ1
GeneID:3638443 GeneID:3638606 KEGG:cal:CaO19.14082
KEGG:cal:CaO19.6790 Uniprot:Q5ADQ1
Length = 887
Score = 137 (53.3 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 28/56 (50%), Positives = 37/56 (66%)
Query: 45 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
QG Q D +NTT+FVGGL +V++ L F +G I VKIP GK CGFV+++N
Sbjct: 511 QGQQFV-DPNNTTVFVGGLSSDVSEPTLHTLFKPFGLIQQVKIPPGKNCGFVKYSN 565
Score = 66 (28.3 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 11/22 (50%), Positives = 16/22 (72%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR 22
+ EMNG + + RP+R+ ATPR
Sbjct: 314 LIEMNGAWFAGRPLRVALATPR 335
>UNIPROTKB|G4NFS0 [details] [associations]
symbol:MGG_08741 "tRNA selenocysteine-associated protein 1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:CM001236 RefSeq:XP_003719244.1
EnsemblFungi:MGG_08741T0 GeneID:2679034 KEGG:mgr:MGG_08741
Uniprot:G4NFS0
Length = 415
Score = 167 (63.8 bits), Expect = 8.4e-12, P = 8.4e-12
Identities = 33/58 (56%), Positives = 41/58 (70%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAIN 109
D +NTT+FVGGL VT+++LR F +G+I VKIP GKGCGFVQF + MAIN
Sbjct: 280 DPNNTTVFVGGLSGYVTEDELRSFFQGFGDITYVKIPPGKGCGFVQFVHRHAAEMAIN 337
>SGD|S000000416 [details] [associations]
symbol:NGR1 "RNA binding protein that negatively regulates
growth rate" species:4932 "Saccharomyces cerevisiae" [GO:0005737
"cytoplasm" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:0007005 "mitochondrion organization"
evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0061158 "3'-UTR-mediated
mRNA destabilization" evidence=IMP;IDA] [GO:0003729 "mRNA binding"
evidence=IDA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IDA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 SGD:S000000416 GO:GO:0048471 GO:GO:0000166
GO:GO:0003729 Gene3D:3.30.70.330 EMBL:BK006936 GO:GO:0000932
GO:GO:0007005 GO:GO:0010494 eggNOG:COG0724 OrthoDB:EOG44BFB8
RefSeq:NP_009771.3 GeneID:852513 KEGG:sce:YBR212W
GeneTree:ENSGT00510000047100 EMBL:Z14097 EMBL:Z36081 PIR:S46086
RefSeq:NP_009775.3 ProteinModelPortal:P32831 SMR:P32831
DIP:DIP-5160N IntAct:P32831 MINT:MINT-513097 STRING:P32831
PaxDb:P32831 PeptideAtlas:P32831 EnsemblFungi:YBR212W GeneID:852517
KEGG:sce:YBR216C CYGD:YBR212w OMA:RFANETE NextBio:971535
Genevestigator:P32831 GermOnline:YBR212W GO:GO:0061158
Uniprot:P32831
Length = 672
Score = 145 (56.1 bits), Expect = 8.9e-12, Sum P(2) = 8.9e-12
Identities = 28/60 (46%), Positives = 38/60 (63%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
D +NTT+FVGGL P T+ LR F +G I +V+IP GK CGFV+F + +I G+
Sbjct: 356 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGL 415
Score = 49 (22.3 bits), Expect = 8.9e-12, Sum P(2) = 8.9e-12
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR 22
+ EM+G + R +R+ ATPR
Sbjct: 251 LIEMSGKWFQGRALRVAYATPR 272
>ZFIN|ZDB-GENE-040426-2298 [details] [associations]
symbol:rbm22 "RNA binding motif protein 22"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0009790 "embryo development"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0017069
"snRNA binding" evidence=ISS] [GO:0036002 "pre-mRNA binding"
evidence=ISS] [GO:0033120 "positive regulation of RNA splicing"
evidence=ISS] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=ISS] [GO:0003723 "RNA binding" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR000504 InterPro:IPR000571 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 PROSITE:PS50103 SMART:SM00356
SMART:SM00360 ZFIN:ZDB-GENE-040426-2298 GO:GO:0005634 GO:GO:0005737
GO:GO:0000166 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.70.330
GO:GO:0005681 GO:GO:0009790 GO:GO:0017069 eggNOG:NOG277760
HOGENOM:HOG000171086 KO:K12872 OMA:ILADKAC GO:GO:0045292
GO:GO:0036002 GO:GO:0033120 HSSP:Q9H0Z9 CTD:55696
HOVERGEN:HBG083475 OrthoDB:EOG40S0FW EMBL:AY648794 EMBL:BC065892
IPI:IPI00487656 RefSeq:NP_998379.1 RefSeq:XP_003200934.1
UniGene:Dr.32898 ProteinModelPortal:Q6NZZ9 SMR:Q6NZZ9 STRING:Q6NZZ9
PRIDE:Q6NZZ9 Ensembl:ENSDART00000003983 Ensembl:ENSDART00000122126
GeneID:100536641 GeneID:406495 KEGG:dre:100536641 KEGG:dre:406495
GeneTree:ENSGT00390000002792 InParanoid:Q6NZZ9 NextBio:20818079
Bgee:Q6NZZ9 Uniprot:Q6NZZ9
Length = 425
Score = 128 (50.1 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D S TT+++GGL NVTD +LR F Q+GEI ++ I + C F+QFA
Sbjct: 228 DKSITTLYIGGLGENVTDSELRNHFYQFGEIRTITIVQRQQCAFIQFA 275
>UNIPROTKB|F1P368 [details] [associations]
symbol:DAZL "Deleted in azoospermia-like" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003730 "mRNA 3'-UTR binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005844 "polysome" evidence=IEA]
[GO:0007281 "germ cell development" evidence=IEA] [GO:0008494
"translation activator activity" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0045836 "positive
regulation of meiosis" evidence=IEA] [GO:0045948 "positive
regulation of translational initiation" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0008494 GO:GO:0003730 GO:GO:0005844 GO:GO:0045836
GO:GO:0045948 GeneTree:ENSGT00530000063480 IPI:IPI00575414
OMA:YVIPPAY EMBL:AADN02001034 Ensembl:ENSGALT00000018341
Uniprot:F1P368
Length = 289
Score = 121 (47.7 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 33/99 (33%), Positives = 50/99 (50%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-----PVGKGCGFVQFANSLGQ 104
EG T+FVGG+D + + ++R F QYG + VKI V KG GFV F +++
Sbjct: 30 EGKIMPNTVFVGGIDIRMNEAEIRSYFEQYGTVKEVKIITDRTGVSKGYGFVSFLDNV-D 88
Query: 105 IMAINGVGHTMEGKFMMVMGMLFRHQMTQACTLQQLRPM 143
+ I ++ GK + +G R Q C+ Q RP+
Sbjct: 89 VQKIVESQISVHGK-RLKLGPAIRKQQN-LCSYMQPRPL 125
>UNIPROTKB|Q804A9 [details] [associations]
symbol:DAZL "Deleted in azoospermia-like" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0048477 "oogenesis" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0007275 GO:GO:0005737
GO:GO:0030154 GO:GO:0006417 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0048477 GO:GO:0007283 GO:GO:0003723 eggNOG:NOG260394
OrthoDB:EOG4T783S CTD:1618 HOVERGEN:HBG000573 EMBL:AY211387
IPI:IPI00575414 RefSeq:NP_989549.1 UniGene:Gga.5133
ProteinModelPortal:Q804A9 STRING:Q804A9 GeneID:374054
KEGG:gga:374054 HOGENOM:HOG000246400 InParanoid:Q804A9
NextBio:20813576 Uniprot:Q804A9
Length = 289
Score = 121 (47.7 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 33/99 (33%), Positives = 50/99 (50%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-----PVGKGCGFVQFANSLGQ 104
EG T+FVGG+D + + ++R F QYG + VKI V KG GFV F +++
Sbjct: 30 EGKIMPNTVFVGGIDIRMNEAEIRSYFEQYGTVKEVKIITDRTGVSKGYGFVSFLDNV-D 88
Query: 105 IMAINGVGHTMEGKFMMVMGMLFRHQMTQACTLQQLRPM 143
+ I ++ GK + +G R Q C+ Q RP+
Sbjct: 89 VQKIVESQISVHGK-RLKLGPAIRKQQN-LCSYMQPRPL 125
>ZFIN|ZDB-GENE-030131-2167 [details] [associations]
symbol:tia1l "cytotoxic granule-associated RNA
binding protein 1, like" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-030131-2167 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 HSSP:P11940 GeneTree:ENSGT00680000099967 KO:K13201
OMA:PAYNTTV HOVERGEN:HBG105006 EMBL:BX088551 EMBL:BC045485
EMBL:BC066734 IPI:IPI00499030 RefSeq:NP_956476.1 UniGene:Dr.5585
SMR:Q7ZVM6 Ensembl:ENSDART00000003957 GeneID:323447 KEGG:dre:323447
CTD:323447 InParanoid:Q7ZVM6 NextBio:20808253 Uniprot:Q7ZVM6
Length = 342
Score = 120 (47.3 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 34/120 (28%), Positives = 60/120 (50%)
Query: 3 EMNGVYCSSRPMRIGAATPRKXXXXXXXXXXXXXXASNGAPGQGPQSEGDSSNTTIFVGG 62
+MNG + R +R AT RK +S + ++ SN T++ GG
Sbjct: 157 QMNGQWLGGRQIRTNWAT-RKPSAPKSNNEGA---SSKHLSYEEVLNQSSPSNCTVYCGG 212
Query: 63 LDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQ---IMAINGV---GHTME 116
+ ++D+ +RQ FS +G+I +++ KG FV+F + G I+++NG GHT++
Sbjct: 213 IASGLSDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFDSHEGAAHAIVSVNGTCIEGHTVK 272
>TAIR|locus:2172144 [details] [associations]
symbol:AT5G54580 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] [GO:0005739
"mitochondrion" evidence=IDA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005739
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AB016879 HOGENOM:HOG000276232
HSSP:Q61474 UniGene:At.52694 EMBL:AY072101 EMBL:AY096589
EMBL:AY085234 IPI:IPI00521049 RefSeq:NP_200269.1 UniGene:At.20805
ProteinModelPortal:Q9FIU6 SMR:Q9FIU6 IntAct:Q9FIU6 PaxDb:Q9FIU6
PRIDE:Q9FIU6 EnsemblPlants:AT5G54580.1 GeneID:835546
KEGG:ath:AT5G54580 TAIR:At5g54580 eggNOG:NOG324885
InParanoid:Q9FIU6 OMA:IKGMDGK PhylomeDB:Q9FIU6
ProtClustDB:CLSN2696829 ArrayExpress:Q9FIU6 Genevestigator:Q9FIU6
Uniprot:Q9FIU6
Length = 156
Score = 113 (44.8 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 32/89 (35%), Positives = 45/89 (50%)
Query: 38 ASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GK 91
A + P + PQ+E +T +FV GL T E LR F+Q+GE+A K+ K
Sbjct: 42 AESQTPAR-PQAE---PSTNLFVSGLSKRTTSEGLRTAFAQFGEVADAKVVTDRVSGYSK 97
Query: 92 GCGFVQFANSLGQIMAINGVGHTMEGKFM 120
G GFV++A I G M+GKF+
Sbjct: 98 GFGFVRYATLEDSAKGIAG----MDGKFL 122
>UNIPROTKB|J9P972 [details] [associations]
symbol:DAZAP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104255 EMBL:AAEX03012650 EMBL:AAEX03012651
Ensembl:ENSCAFT00000049246 Uniprot:J9P972
Length = 258
Score = 117 (46.2 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 38/117 (32%), Positives = 53/117 (45%)
Query: 13 PMRIGAATPRKXXXXXXXXXXXXXXASNGAPGQGPQSEGDSSNTTI---FVGGLDPNVTD 69
P +G + PR+ S GAP S ++ + FVGGLD + T
Sbjct: 10 PQCLGGSRPRQPTGGRKERLGGPEGTS-GAPSHSSVSARKAAQAALRKLFVGGLDWSTTQ 68
Query: 70 EDLRQPFSQYGEIASVKIPVGK------GCGFVQFA--NSLGQIMAINGVGHTMEGK 118
E LR FSQYGE+ I K G GFV+F N +G ++A HT++G+
Sbjct: 69 ETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRP--HTLDGR 123
Score = 98 (39.6 bits), Expect = 0.00091, P = 0.00091
Identities = 29/96 (30%), Positives = 47/96 (48%)
Query: 45 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQF 98
+GP+S+ SN IFVGG+ N + +LR+ F ++G + V + +G GF+ F
Sbjct: 130 KGPRSDNSKSNK-IFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITF 188
Query: 99 ANSLGQIMAINGVGHTMEGKFMMVMGMLFRHQMTQA 134
+ A+N H + GK + V R +QA
Sbjct: 189 EDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQA 224
>UNIPROTKB|E7EV40 [details] [associations]
symbol:DAZL "Deleted in azoospermia-like" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC010139
HGNC:HGNC:2685 IPI:IPI00927411 ProteinModelPortal:E7EV40 SMR:E7EV40
Ensembl:ENST00000454457 ArrayExpress:E7EV40 Bgee:E7EV40
Uniprot:E7EV40
Length = 204
Score = 114 (45.2 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 41/143 (28%), Positives = 61/143 (42%)
Query: 7 VYCSSRPMRIGAATPRKXXXXXXXXXXXXXXASNGAPGQGP-QSEGDSSNTTIFVGGLDP 65
V SS + + +T +S+ A QG EG T+FVGG+D
Sbjct: 28 VLMSSSLLLLPKSTANPETPNSTISREASTQSSSAATSQGYILPEGKIMPNTVFVGGIDV 87
Query: 66 NVTDEDLRQPFSQYGEIASVKI-----PVGKGCGFVQFANSLGQIMAINGVGHTMEGKFM 120
+ + ++R F++YG + VKI V KG GFV F N + + I GK
Sbjct: 88 RMDETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFFNDV-DVQKIVESQINFHGK-K 145
Query: 121 MVMGMLFRHQMTQACTLQQLRPM 143
+ +G R Q A +Q RP+
Sbjct: 146 LKLGPAIRKQNLCAYHVQP-RPL 167
>WB|WBGene00022235 [details] [associations]
symbol:sqd-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000003
"reproduction" evidence=IMP] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0000003 GO:GO:0003676 EMBL:FO081731
eggNOG:COG0724 GeneTree:ENSGT00700000104255 KO:K03102
RefSeq:NP_001023574.1 ProteinModelPortal:Q4W5P0 SMR:Q4W5P0
STRING:Q4W5P0 PaxDb:Q4W5P0 PRIDE:Q4W5P0 EnsemblMetazoa:Y73B6BL.6b.1
EnsemblMetazoa:Y73B6BL.6b.2 EnsemblMetazoa:Y73B6BL.6b.3
EnsemblMetazoa:Y73B6BL.6b.4 EnsemblMetazoa:Y73B6BL.6b.5
EnsemblMetazoa:Y73B6BL.6b.6 EnsemblMetazoa:Y73B6BL.6b.7
EnsemblMetazoa:Y73B6BL.6b.8 GeneID:177392 KEGG:cel:CELE_Y73B6BL.6
UCSC:Y73B6BL.6a.7 CTD:177392 WormBase:Y73B6BL.6b
HOGENOM:HOG000017794 InParanoid:Q4W5P0 OMA:GHQTGYK NextBio:896614
ArrayExpress:Q4W5P0 Uniprot:Q4W5P0
Length = 308
Score = 118 (46.6 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 30/91 (32%), Positives = 46/91 (50%)
Query: 38 ASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GK 91
AS G ++G+ IFVGG+ P V +EDL F+QYGE+A ++ +
Sbjct: 12 ASETIKENGHSTKGNEDKK-IFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSR 70
Query: 92 GCGFVQFANSLGQIMAINGVGHTMEGKFMMV 122
G FV+F G +A+ T++GK + V
Sbjct: 71 GFAFVEFTTGEGCKLALAAREQTIKGKSVEV 101
>UNIPROTKB|F1P555 [details] [associations]
symbol:SFPQ "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000380 "alternative mRNA
splicing, via spliceosome" evidence=IEA] [GO:0016363 "nuclear
matrix" evidence=IEA] [GO:0042382 "paraspeckles" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0016363 GO:GO:0000380 GO:GO:0042382 InterPro:IPR012975
Pfam:PF08075 GeneTree:ENSGT00390000005004 OMA:APGGHPK
EMBL:AADN02043825 EMBL:AADN02043826 IPI:IPI00574618
Ensembl:ENSGALT00000003963 ArrayExpress:F1P555 Uniprot:F1P555
Length = 647
Score = 105 (42.0 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 24/66 (36%), Positives = 38/66 (57%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF-ANSLGQIMAINGVGHTME 116
+FVG L ++TDED ++ F++YGE V I GKG GF++ + +L +I M
Sbjct: 239 LFVGNLPADITDEDFKRLFAKYGEPGEVFINKGKGFGFIKLESRALAEIAKAELDDTPMR 298
Query: 117 GKFMMV 122
G+ + V
Sbjct: 299 GRQLRV 304
Score = 39 (18.8 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 7/10 (70%), Positives = 8/10 (80%)
Query: 41 GAPGQGPQSE 50
G PG GP+SE
Sbjct: 57 GPPGGGPKSE 66
>UNIPROTKB|G4MVL2 [details] [associations]
symbol:MGG_08898 "Differentiation regulator" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0043581 "mycelium development" evidence=IEP]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0043581 EMBL:CM001232 InterPro:IPR018835 Pfam:PF10378
RefSeq:XP_003713928.1 ProteinModelPortal:G4MVL2
EnsemblFungi:MGG_08898T0 GeneID:2679884 KEGG:mgr:MGG_08898
Uniprot:G4MVL2
Length = 806
Score = 122 (48.0 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 33/77 (42%), Positives = 39/77 (50%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
S G S N +++G LD T+E LRQ FS+YGEI V K C FV F N I AI
Sbjct: 517 SGGASRN--VYIGNLDETWTEERLRQDFSEYGEIELVNTLREKSCAFVNFTNIANAIKAI 574
Query: 109 NGVGHTME-GKFMMVMG 124
V E KF + G
Sbjct: 575 EAVRSKDEYRKFKVNFG 591
>UNIPROTKB|F1NMD7 [details] [associations]
symbol:RBM22 "Pre-mRNA-splicing factor RBM22" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000060 "protein
import into nucleus, translocation" evidence=IEA] [GO:0005487
"nucleocytoplasmic transporter activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017069 "snRNA binding" evidence=IEA]
[GO:0033120 "positive regulation of RNA splicing" evidence=IEA]
[GO:0033554 "cellular response to stress" evidence=IEA] [GO:0036002
"pre-mRNA binding" evidence=IEA] [GO:0045292 "mRNA cis splicing,
via spliceosome" evidence=IEA] [GO:0048306 "calcium-dependent
protein binding" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0090316 "positive regulation of
intracellular protein transport" evidence=IEA] InterPro:IPR000504
InterPro:IPR000571 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
PROSITE:PS50103 SMART:SM00356 SMART:SM00360 GO:GO:0005737
GO:GO:0033554 GO:GO:0000166 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0000060 GO:GO:0090316 GO:GO:0071013
GO:GO:0017069 GO:GO:0045292 GO:GO:0036002 GO:GO:0033120
GO:GO:0005487 IPI:IPI00593663 GeneTree:ENSGT00390000002792
OMA:CAFVQYT EMBL:AADN02028638 PRIDE:F1NMD7
Ensembl:ENSGALT00000007249 Uniprot:F1NMD7
Length = 420
Score = 118 (46.6 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA
Sbjct: 228 DKTITTLYVGGLGDTITESDLRNHFYQFGEIRTITVVQRQQCAFIQFA 275
>UNIPROTKB|Q5ZM16 [details] [associations]
symbol:RBM22 "Pre-mRNA-splicing factor RBM22" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006913 "nucleocytoplasmic
transport" evidence=ISS] [GO:0033120 "positive regulation of RNA
splicing" evidence=ISS] [GO:0033554 "cellular response to stress"
evidence=ISS] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=ISS] [GO:0090316 "positive regulation of intracellular
protein transport" evidence=ISS] [GO:0005487 "nucleocytoplasmic
transporter activity" evidence=ISS] [GO:0017069 "snRNA binding"
evidence=ISS] [GO:0036002 "pre-mRNA binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] InterPro:IPR000504 InterPro:IPR000571
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 PROSITE:PS50103
SMART:SM00356 SMART:SM00360 GO:GO:0005634 GO:GO:0005737
GO:GO:0033554 GO:GO:0000166 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0090316 GO:GO:0017069
eggNOG:NOG277760 HOGENOM:HOG000171086 KO:K12872 GO:GO:0045292
GO:GO:0036002 GO:GO:0033120 GO:GO:0005487 CTD:55696
HOVERGEN:HBG083475 OrthoDB:EOG40S0FW EMBL:AJ719568 IPI:IPI00593663
RefSeq:NP_001006151.1 UniGene:Gga.4751 HSSP:Q6PHZ5
ProteinModelPortal:Q5ZM16 SMR:Q5ZM16 STRING:Q5ZM16 GeneID:416270
KEGG:gga:416270 InParanoid:Q5ZM16 NextBio:20819755 Uniprot:Q5ZM16
Length = 420
Score = 118 (46.6 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA
Sbjct: 228 DKTITTLYVGGLGDTITESDLRNHFYQFGEIRTITVVQRQQCAFIQFA 275
>RGD|1305770 [details] [associations]
symbol:Rbm22 "RNA binding motif protein 22" species:10116
"Rattus norvegicus" [GO:0000060 "protein import into nucleus,
translocation" evidence=IEA;ISO] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005487 "nucleocytoplasmic transporter activity"
evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO;ISS]
[GO:0005737 "cytoplasm" evidence=ISO;ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0017069 "snRNA binding"
evidence=ISO;ISS] [GO:0033120 "positive regulation of RNA splicing"
evidence=ISO;ISS] [GO:0033554 "cellular response to stress"
evidence=ISO;ISS] [GO:0036002 "pre-mRNA binding" evidence=ISO;ISS]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISO;ISS]
[GO:0048306 "calcium-dependent protein binding" evidence=IEA;ISO]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
[GO:0090316 "positive regulation of intracellular protein
transport" evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000504 InterPro:IPR000571 InterPro:IPR012677
PROSITE:PS50102 PROSITE:PS50103 SMART:SM00356 SMART:SM00360
RGD:1305770 GO:GO:0005634 GO:GO:0005737 GO:GO:0033554 GO:GO:0000166
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0000060
GO:GO:0090316 GO:GO:0071013 GO:GO:0017069 eggNOG:NOG277760
HOGENOM:HOG000171086 KO:K12872 OMA:ILADKAC GO:GO:0045292
GO:GO:0036002 GO:GO:0033120 GO:GO:0005487 CTD:55696
HOVERGEN:HBG083475 OrthoDB:EOG40S0FW HSSP:Q6PHZ5
GeneTree:ENSGT00390000002792 EMBL:BC097991 IPI:IPI00194439
RefSeq:NP_001020847.1 UniGene:Rn.105130 ProteinModelPortal:Q4V7D7
SMR:Q4V7D7 STRING:Q4V7D7 PRIDE:Q4V7D7 Ensembl:ENSRNOT00000026087
GeneID:307410 KEGG:rno:307410 UCSC:RGD:1305770 InParanoid:Q4V7D7
NextBio:657353 Genevestigator:Q4V7D7 GermOnline:ENSRNOG00000019235
Uniprot:Q4V7D7
Length = 420
Score = 118 (46.6 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D + TT++VGGL +T+ DLR F Q+GEI +V + + C F+QFA
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTVTVVQRQQCAFIQFA 275
>UNIPROTKB|F5GWK3 [details] [associations]
symbol:RBM22 "Pre-mRNA-splicing factor RBM22" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR000571
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 PROSITE:PS50103
SMART:SM00356 SMART:SM00360 GO:GO:0000166 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003723 EMBL:AC008453
IPI:IPI00909290 HGNC:HGNC:25503 ProteinModelPortal:F5GWK3
SMR:F5GWK3 Ensembl:ENST00000540000 ArrayExpress:F5GWK3 Bgee:F5GWK3
Uniprot:F5GWK3
Length = 371
Score = 117 (46.2 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA
Sbjct: 179 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFA 226
>UNIPROTKB|I3LPX5 [details] [associations]
symbol:LOC100625706 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0045948 "positive regulation of translational
initiation" evidence=IEA] [GO:0045836 "positive regulation of
meiosis" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0008494 "translation activator activity"
evidence=IEA] [GO:0007281 "germ cell development" evidence=IEA]
[GO:0005844 "polysome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003730 "mRNA 3'-UTR binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0008494
GO:GO:0003730 GO:GO:0007281 GO:GO:0005844 GO:GO:0045836
GO:GO:0045948 GeneTree:ENSGT00530000063480 OMA:YVIPPAY
EMBL:FP312724 Ensembl:ENSSSCT00000022390 Uniprot:I3LPX5
Length = 298
Score = 115 (45.5 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 38/112 (33%), Positives = 54/112 (48%)
Query: 38 ASNGAPGQG-PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-----PVGK 91
+S+ A QG EG TIFVGG+D + + ++R F++YG + VKI V K
Sbjct: 21 SSSAATSQGYVLPEGKIMPNTIFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSK 80
Query: 92 GCGFVQFANSLGQIMAINGVGHTMEGKFMMVMGMLFRHQMTQACTLQQLRPM 143
G GFV F N + + I GK + +G R Q A +Q RP+
Sbjct: 81 GYGFVSFYNDV-DVQKIVESQINFHGK-KLKLGPAIRKQNLCAYHVQP-RPL 129
>UNIPROTKB|F2Z4G3 [details] [associations]
symbol:RBM22 "Pre-mRNA-splicing factor RBM22" species:9913
"Bos taurus" [GO:0090316 "positive regulation of intracellular
protein transport" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0048306 "calcium-dependent protein
binding" evidence=IEA] [GO:0045292 "mRNA cis splicing, via
spliceosome" evidence=IEA] [GO:0036002 "pre-mRNA binding"
evidence=IEA] [GO:0033554 "cellular response to stress"
evidence=IEA] [GO:0033120 "positive regulation of RNA splicing"
evidence=IEA] [GO:0017069 "snRNA binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005487 "nucleocytoplasmic
transporter activity" evidence=IEA] [GO:0000060 "protein import
into nucleus, translocation" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR000571
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 PROSITE:PS50103
SMART:SM00356 SMART:SM00360 GO:GO:0005737 GO:GO:0033554
GO:GO:0000166 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.70.330
GO:GO:0000060 GO:GO:0090316 GO:GO:0071013 GO:GO:0017069 OMA:ILADKAC
GO:GO:0045292 GO:GO:0036002 GO:GO:0033120 GO:GO:0005487
UniGene:Bt.28600 GeneTree:ENSGT00390000002792 EMBL:DAAA02020630
IPI:IPI00716918 ProteinModelPortal:F2Z4G3 SMR:F2Z4G3 PRIDE:F2Z4G3
Ensembl:ENSBTAT00000042873 NextBio:20925883 Uniprot:F2Z4G3
Length = 420
Score = 117 (46.2 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFA 275
>UNIPROTKB|Q3B7L8 [details] [associations]
symbol:RBM22 "Pre-mRNA-splicing factor RBM22" species:9913
"Bos taurus" [GO:0006913 "nucleocytoplasmic transport"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0036002 "pre-mRNA binding"
evidence=ISS] [GO:0017069 "snRNA binding" evidence=ISS] [GO:0005487
"nucleocytoplasmic transporter activity" evidence=ISS] [GO:0090316
"positive regulation of intracellular protein transport"
evidence=ISS] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=ISS] [GO:0033554 "cellular response to stress"
evidence=ISS] [GO:0033120 "positive regulation of RNA splicing"
evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR000571 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
PROSITE:PS50103 SMART:SM00356 SMART:SM00360 GO:GO:0005634
GO:GO:0005737 GO:GO:0033554 GO:GO:0000166 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0090316
GO:GO:0017069 eggNOG:NOG277760 HOGENOM:HOG000171086 KO:K12872
GO:GO:0045292 GO:GO:0036002 GO:GO:0033120 GO:GO:0005487
EMBL:BC107551 IPI:IPI00709529 RefSeq:NP_001032907.1
UniGene:Bt.28600 ProteinModelPortal:Q3B7L8 SMR:Q3B7L8 PRIDE:Q3B7L8
GeneID:512330 KEGG:bta:512330 CTD:55696 HOVERGEN:HBG083475
InParanoid:Q3B7L8 OrthoDB:EOG40S0FW NextBio:20870344 Uniprot:Q3B7L8
Length = 420
Score = 117 (46.2 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFA 275
>UNIPROTKB|Q9NW64 [details] [associations]
symbol:RBM22 "Pre-mRNA-splicing factor RBM22" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0000060 "protein import into nucleus,
translocation" evidence=IDA] [GO:0048306 "calcium-dependent protein
binding" evidence=IPI] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0005487 "nucleocytoplasmic transporter activity"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0033554
"cellular response to stress" evidence=IDA] [GO:0090316 "positive
regulation of intracellular protein transport" evidence=IDA]
[GO:0033120 "positive regulation of RNA splicing" evidence=IDA]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=IDA]
[GO:0017069 "snRNA binding" evidence=IDA] [GO:0036002 "pre-mRNA
binding" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000504 InterPro:IPR000571 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 PROSITE:PS50103 SMART:SM00356
SMART:SM00360 GO:GO:0005737 EMBL:CH471062 GO:GO:0033554
GO:GO:0000166 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.70.330
GO:GO:0000060 GO:GO:0090316 GO:GO:0071013 GO:GO:0017069
eggNOG:NOG277760 HOGENOM:HOG000171086 KO:K12872 OMA:ILADKAC
GO:GO:0045292 GO:GO:0036002 GO:GO:0033120 EMBL:AC008453
GO:GO:0005487 CTD:55696 HOVERGEN:HBG083475 OrthoDB:EOG40S0FW
EMBL:AL136933 EMBL:AK001152 EMBL:AK297019 EMBL:BC003402 EMBL:U39402
IPI:IPI00019046 IPI:IPI00909290 RefSeq:NP_060517.1
UniGene:Hs.713564 PDB:2YTC PDBsum:2YTC ProteinModelPortal:Q9NW64
SMR:Q9NW64 IntAct:Q9NW64 STRING:Q9NW64 PhosphoSite:Q9NW64
DMDM:74762758 PaxDb:Q9NW64 PRIDE:Q9NW64 DNASU:55696
Ensembl:ENST00000199814 Ensembl:ENST00000447771 GeneID:55696
KEGG:hsa:55696 UCSC:uc003lst.3 GeneCards:GC05M150050
HGNC:HGNC:25503 HPA:HPA001634 MIM:612430 neXtProt:NX_Q9NW64
PharmGKB:PA134982384 InParanoid:Q9NW64 EvolutionaryTrace:Q9NW64
GenomeRNAi:55696 NextBio:60521 ArrayExpress:Q9NW64 Bgee:Q9NW64
CleanEx:HS_RBM22 Genevestigator:Q9NW64 GermOnline:ENSG00000086589
Uniprot:Q9NW64
Length = 420
Score = 117 (46.2 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFA 275
>UNIPROTKB|Q4R4J1 [details] [associations]
symbol:RBM22 "Pre-mRNA-splicing factor RBM22" species:9541
"Macaca fascicularis" [GO:0005487 "nucleocytoplasmic transporter
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006913
"nucleocytoplasmic transport" evidence=ISS] [GO:0017069 "snRNA
binding" evidence=ISS] [GO:0033120 "positive regulation of RNA
splicing" evidence=ISS] [GO:0033554 "cellular response to stress"
evidence=ISS] [GO:0036002 "pre-mRNA binding" evidence=ISS]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISS]
[GO:0090316 "positive regulation of intracellular protein
transport" evidence=ISS] InterPro:IPR000504 InterPro:IPR000571
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 PROSITE:PS50103
SMART:SM00356 SMART:SM00360 GO:GO:0005634 GO:GO:0005737
GO:GO:0033554 GO:GO:0000166 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0090316 GO:GO:0017069
GO:GO:0045292 GO:GO:0036002 GO:GO:0033120 GO:GO:0005487
HOVERGEN:HBG083475 HSSP:Q6PHZ5 EMBL:AB169903
ProteinModelPortal:Q4R4J1 SMR:Q4R4J1 PRIDE:Q4R4J1 Uniprot:Q4R4J1
Length = 420
Score = 117 (46.2 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFA 275
>UNIPROTKB|Q5RAY5 [details] [associations]
symbol:RBM22 "Pre-mRNA-splicing factor RBM22" species:9601
"Pongo abelii" [GO:0005487 "nucleocytoplasmic transporter activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0006913 "nucleocytoplasmic transport"
evidence=ISS] [GO:0017069 "snRNA binding" evidence=ISS] [GO:0033120
"positive regulation of RNA splicing" evidence=ISS] [GO:0033554
"cellular response to stress" evidence=ISS] [GO:0036002 "pre-mRNA
binding" evidence=ISS] [GO:0045292 "mRNA cis splicing, via
spliceosome" evidence=ISS] [GO:0090316 "positive regulation of
intracellular protein transport" evidence=ISS] InterPro:IPR000504
InterPro:IPR000571 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
PROSITE:PS50103 SMART:SM00356 SMART:SM00360 GO:GO:0005634
GO:GO:0005737 GO:GO:0033554 GO:GO:0000166 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0090316
GO:GO:0017069 KO:K12872 GO:GO:0045292 GO:GO:0036002 GO:GO:0033120
GO:GO:0005487 CTD:55696 HOVERGEN:HBG083475 HSSP:Q6PHZ5
EMBL:CR858876 RefSeq:NP_001125624.1 UniGene:Pab.12645
ProteinModelPortal:Q5RAY5 SMR:Q5RAY5 GeneID:100172542
KEGG:pon:100172542 InParanoid:Q5RAY5 Uniprot:Q5RAY5
Length = 420
Score = 117 (46.2 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFA 275
>MGI|MGI:1914060 [details] [associations]
symbol:Rbm22 "RNA binding motif protein 22" species:10090
"Mus musculus" [GO:0000060 "protein import into nucleus,
translocation" evidence=ISO] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005487
"nucleocytoplasmic transporter activity" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0017069 "snRNA
binding" evidence=ISO] [GO:0033120 "positive regulation of RNA
splicing" evidence=ISO] [GO:0033554 "cellular response to stress"
evidence=ISO] [GO:0036002 "pre-mRNA binding" evidence=ISO]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0048306
"calcium-dependent protein binding" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0090316 "positive
regulation of intracellular protein transport" evidence=ISO]
InterPro:IPR000504 InterPro:IPR000571 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 PROSITE:PS50103 SMART:SM00356
SMART:SM00360 MGI:MGI:1914060 GO:GO:0005634 GO:GO:0005737
GO:GO:0033554 GO:GO:0000166 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0000060 GO:GO:0090316 GO:GO:0071013
GO:GO:0017069 eggNOG:NOG277760 HOGENOM:HOG000171086 KO:K12872
OMA:ILADKAC GO:GO:0045292 GO:GO:0036002 GO:GO:0033120 GO:GO:0005487
CTD:55696 HOVERGEN:HBG083475 OrthoDB:EOG40S0FW HSSP:Q6PHZ5
GeneTree:ENSGT00390000002792 EMBL:AK018452 EMBL:AK045116
EMBL:AK150271 EMBL:AK151758 EMBL:AK152252 EMBL:AK166600
EMBL:AK167509 EMBL:AK168919 EMBL:BC080205 IPI:IPI00221951
RefSeq:NP_080052.1 UniGene:Mm.275106 ProteinModelPortal:Q8BHS3
SMR:Q8BHS3 STRING:Q8BHS3 PhosphoSite:Q8BHS3 PaxDb:Q8BHS3
PRIDE:Q8BHS3 Ensembl:ENSMUST00000025506 GeneID:66810 KEGG:mmu:66810
UCSC:uc008fal.1 InParanoid:Q8BHS3 ChiTaRS:RBM22 NextBio:322703
Bgee:Q8BHS3 CleanEx:MM_RBM22 Genevestigator:Q8BHS3
GermOnline:ENSMUSG00000024604 Uniprot:Q8BHS3
Length = 420
Score = 117 (46.2 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFA 275
>UNIPROTKB|D4A0P8 [details] [associations]
symbol:Dazl "Protein Dazl" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003730 "mRNA 3'-UTR binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005844 "polysome" evidence=IEA]
[GO:0007281 "germ cell development" evidence=IEA] [GO:0008494
"translation activator activity" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0045836 "positive
regulation of meiosis" evidence=IEA] [GO:0045948 "positive
regulation of translational initiation" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 RGD:1591714 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 GeneTree:ENSGT00530000063480 CTD:1618 EMBL:CH473987
IPI:IPI00870381 RefSeq:NP_001102884.1 UniGene:Rn.136288
Ensembl:ENSRNOT00000066517 GeneID:680486 KEGG:rno:680486
NextBio:718813 Uniprot:D4A0P8
Length = 281
Score = 114 (45.2 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 37/113 (32%), Positives = 53/113 (46%)
Query: 38 ASNGAPGQG-PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-----PVGK 91
+S+ QG EG T+FVGG+D + + ++R F++YG + VKI V K
Sbjct: 21 SSSATTSQGYVLPEGKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSK 80
Query: 92 GCGFVQFANSLGQIMAINGVGHTMEGKFMMVMGMLFRHQMTQACTLQ-QLRPM 143
G GFV F N + + I GK + +G R Q CT Q RP+
Sbjct: 81 GYGFVSFYNDV-DVQKIVESQINFHGK-KLKLGPAIRKQ--NLCTYHVQPRPL 129
>UNIPROTKB|E2RG35 [details] [associations]
symbol:RBM22 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0090316 "positive regulation of intracellular
protein transport" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0048306 "calcium-dependent protein
binding" evidence=IEA] [GO:0045292 "mRNA cis splicing, via
spliceosome" evidence=IEA] [GO:0036002 "pre-mRNA binding"
evidence=IEA] [GO:0033554 "cellular response to stress"
evidence=IEA] [GO:0033120 "positive regulation of RNA splicing"
evidence=IEA] [GO:0017069 "snRNA binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005487 "nucleocytoplasmic
transporter activity" evidence=IEA] [GO:0000060 "protein import
into nucleus, translocation" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR000571
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 PROSITE:PS50103
SMART:SM00356 SMART:SM00360 GO:GO:0005737 GO:GO:0033554
GO:GO:0000166 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.70.330
GO:GO:0000060 GO:GO:0090316 GO:GO:0071013 GO:GO:0017069 OMA:ILADKAC
GO:GO:0045292 GO:GO:0036002 GO:GO:0033120 GO:GO:0005487
GeneTree:ENSGT00390000002792 EMBL:AAEX03003093
ProteinModelPortal:E2RG35 Ensembl:ENSCAFT00000028740 Uniprot:E2RG35
Length = 422
Score = 117 (46.2 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA
Sbjct: 230 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFA 277
>UNIPROTKB|F6S8J2 [details] [associations]
symbol:DAZ4 "Deleted in azoospermia protein 4" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC006338
HGNC:HGNC:15966 ChiTaRS:DAZ4 EMBL:AC006982 EMBL:AC010089
IPI:IPI01018895 ProteinModelPortal:F6S8J2 SMR:F6S8J2
Ensembl:ENST00000382290 UCSC:uc022cok.1 ArrayExpress:F6S8J2
Bgee:F6S8J2 Uniprot:F6S8J2
Length = 334
Score = 115 (45.5 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 37/112 (33%), Positives = 53/112 (47%)
Query: 38 ASNGAPGQG-PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-----PVGK 91
+S+ A QG EG T+FVGG+D + + ++ F +YG + VKI V K
Sbjct: 21 SSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSK 80
Query: 92 GCGFVQFANSLGQIMAINGVGHTMEGKFMMVMGMLFRHQMTQACTLQQLRPM 143
G GFV F N + + I G GK + +G R Q A +Q RP+
Sbjct: 81 GYGFVSFVNDV-DVQKIVGSQIHFHGK-KLKLGPAIRKQKLCARHVQP-RPL 129
>UNIPROTKB|E7EUF4 [details] [associations]
symbol:DAZ3 "Deleted in azoospermia protein 3" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 HGNC:HGNC:15965
EMBL:AC010089 IPI:IPI00749494 ProteinModelPortal:E7EUF4 SMR:E7EUF4
Ensembl:ENST00000306737 ArrayExpress:E7EUF4 Bgee:E7EUF4
Uniprot:E7EUF4
Length = 337
Score = 115 (45.5 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 37/112 (33%), Positives = 53/112 (47%)
Query: 38 ASNGAPGQG-PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-----PVGK 91
+S+ A QG EG T+FVGG+D + + ++ F +YG + VKI V K
Sbjct: 21 SSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSK 80
Query: 92 GCGFVQFANSLGQIMAINGVGHTMEGKFMMVMGMLFRHQMTQACTLQQLRPM 143
G GFV F N + + I G GK + +G R Q A +Q RP+
Sbjct: 81 GYGFVSFVNDV-DVQKIVGSQIHFHGK-KLKLGPAIRKQKLCARHVQP-RPL 129
>MGI|MGI:1342328 [details] [associations]
symbol:Dazl "deleted in azoospermia-like" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0003730 "mRNA 3'-UTR binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005844 "polysome"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0008494 "translation activator
activity" evidence=ISO;IDA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=IPI]
[GO:0044464 "cell part" evidence=IDA] [GO:0045836 "positive
regulation of meiosis" evidence=IMP] [GO:0045948 "positive
regulation of translational initiation" evidence=ISO;IDA]
[GO:0048477 "oogenesis" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
MGI:MGI:1342328 GO:GO:0007275 GO:GO:0005737 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0048477 GO:GO:0007283 GO:GO:0008494
GO:GO:0003730 GO:GO:0007281 GO:GO:0005844 GO:GO:0045836
eggNOG:NOG260394 GO:GO:0045948 GeneTree:ENSGT00530000063480
OrthoDB:EOG4T783S CTD:1618 HOVERGEN:HBG000573 HOGENOM:HOG000246400
OMA:YVIPPAY EMBL:X95724 EMBL:U38690 EMBL:U46694 EMBL:AK014854
EMBL:AK033183 IPI:IPI00262067 RefSeq:NP_034151.3 UniGene:Mm.280641
PDB:2XS2 PDB:2XS5 PDB:2XS7 PDB:2XSF PDBsum:2XS2 PDBsum:2XS5
PDBsum:2XS7 PDBsum:2XSF ProteinModelPortal:Q64368 SMR:Q64368
IntAct:Q64368 MINT:MINT-133503 STRING:Q64368 PhosphoSite:Q64368
PaxDb:Q64368 PRIDE:Q64368 Ensembl:ENSMUST00000010736 GeneID:13164
KEGG:mmu:13164 UCSC:uc008cyv.2 InParanoid:Q64368
EvolutionaryTrace:Q64368 NextBio:283242 Bgee:Q64368 CleanEx:MM_DAZL
Genevestigator:Q64368 GermOnline:ENSMUSG00000010592 Uniprot:Q64368
Length = 298
Score = 114 (45.2 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 37/113 (32%), Positives = 53/113 (46%)
Query: 38 ASNGAPGQG-PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-----PVGK 91
+S+ QG EG T+FVGG+D + + ++R F++YG + VKI V K
Sbjct: 21 SSSATTSQGYVLPEGKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSK 80
Query: 92 GCGFVQFANSLGQIMAINGVGHTMEGKFMMVMGMLFRHQMTQACTLQ-QLRPM 143
G GFV F N + + I GK + +G R Q CT Q RP+
Sbjct: 81 GYGFVSFYNDV-DVQKIVESQINFHGK-KLKLGPAIRKQ--NLCTYHVQPRPL 129
>RGD|1591714 [details] [associations]
symbol:Dazl "deleted in azoospermia-like" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003730 "mRNA 3'-UTR binding" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0005844 "polysome"
evidence=IEA;ISO] [GO:0007281 "germ cell development"
evidence=IEA;ISO] [GO:0008494 "translation activator activity"
evidence=IEA;ISO] [GO:0042802 "identical protein binding"
evidence=IEA;ISO] [GO:0044464 "cell part" evidence=ISO] [GO:0045836
"positive regulation of meiosis" evidence=IEA;ISO] [GO:0045948
"positive regulation of translational initiation" evidence=IEA;ISO]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 RGD:1591714 GO:GO:0005737 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0008494 GO:GO:0003730 GO:GO:0007281
GO:GO:0005844 GO:GO:0045836 GO:GO:0045948 OrthoDB:EOG4T783S
EMBL:CH473987 UniGene:Rn.136288 IPI:IPI00765442
Ensembl:ENSRNOT00000039512 UCSC:RGD:1591714 Uniprot:D4A3C6
Length = 298
Score = 114 (45.2 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 37/113 (32%), Positives = 53/113 (46%)
Query: 38 ASNGAPGQG-PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-----PVGK 91
+S+ QG EG T+FVGG+D + + ++R F++YG + VKI V K
Sbjct: 21 SSSATTSQGYVLPEGKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSK 80
Query: 92 GCGFVQFANSLGQIMAINGVGHTMEGKFMMVMGMLFRHQMTQACTLQ-QLRPM 143
G GFV F N + + I GK + +G R Q CT Q RP+
Sbjct: 81 GYGFVSFYNDV-DVQKIVESQINFHGK-KLKLGPAIRKQ--NLCTYHVQPRPL 129
>UNIPROTKB|I3LRX5 [details] [associations]
symbol:TIA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048024 "regulation of mRNA splicing, via spliceosome"
evidence=IEA] [GO:0042036 "negative regulation of cytokine
biosynthetic process" evidence=IEA] [GO:0017148 "negative
regulation of translation" evidence=IEA] [GO:0017091 "AU-rich
element binding" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0005737 GO:GO:0017148 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0042036 GO:GO:0048024
GeneTree:ENSGT00680000099967 EMBL:CU929337 RefSeq:XP_003481239.1
Ensembl:ENSSSCT00000027073 GeneID:100736894 KEGG:ssc:100736894
OMA:AGPMANQ Uniprot:I3LRX5
Length = 220
Score = 111 (44.1 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 24/70 (34%), Positives = 41/70 (58%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
++ SN T++ GG+ +T++ +RQ FS +G+I +++ KG FV+F + AI
Sbjct: 41 NQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAI 100
Query: 109 NGV-GHTMEG 117
V G T+EG
Sbjct: 101 VSVNGTTIEG 110
>UNIPROTKB|E7ETJ9 [details] [associations]
symbol:TIAL1 "Nucleolysin TIAR" species:9606 "Homo sapiens"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC012468 HGNC:HGNC:11804
ChiTaRS:TIAL1 IPI:IPI00647436 ProteinModelPortal:E7ETJ9 SMR:E7ETJ9
Ensembl:ENST00000412524 ArrayExpress:E7ETJ9 Bgee:E7ETJ9
Uniprot:E7ETJ9
Length = 132
Score = 108 (43.1 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 29/87 (33%), Positives = 46/87 (52%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI----PVGK--GC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ GK G
Sbjct: 42 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 101
Query: 94 GFVQFANSLGQIMAINGVGHTMEGKFM 120
GFV F N L A N + H M G+++
Sbjct: 102 GFVSFYNKLD---AENAIVH-MGGQWL 124
>UNIPROTKB|E7EN82 [details] [associations]
symbol:DAZ2 "Deleted in azoospermia protein 2" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 HGNC:HGNC:15964
EMBL:AC006983 EMBL:AC007039 EMBL:AC053490 IPI:IPI00874259
ProteinModelPortal:E7EN82 SMR:E7EN82 Ensembl:ENST00000382434
ArrayExpress:E7EN82 Bgee:E7EN82 Uniprot:E7EN82
Length = 361
Score = 115 (45.5 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 37/112 (33%), Positives = 53/112 (47%)
Query: 38 ASNGAPGQG-PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-----PVGK 91
+S+ A QG EG T+FVGG+D + + ++ F +YG + VKI V K
Sbjct: 21 SSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSK 80
Query: 92 GCGFVQFANSLGQIMAINGVGHTMEGKFMMVMGMLFRHQMTQACTLQQLRPM 143
G GFV F N + + I G GK + +G R Q A +Q RP+
Sbjct: 81 GYGFVSFVNDV-DVQKIVGSQIHFHGK-KLKLGPAIRKQKLCARHVQP-RPL 129
>UNIPROTKB|E7EU98 [details] [associations]
symbol:DAZ3 "Deleted in azoospermia protein 3" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 HGNC:HGNC:15965
EMBL:AC010089 IPI:IPI00872285 ProteinModelPortal:E7EU98 SMR:E7EU98
Ensembl:ENST00000400212 ArrayExpress:E7EU98 Bgee:E7EU98
Uniprot:E7EU98
Length = 361
Score = 115 (45.5 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 37/112 (33%), Positives = 53/112 (47%)
Query: 38 ASNGAPGQG-PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-----PVGK 91
+S+ A QG EG T+FVGG+D + + ++ F +YG + VKI V K
Sbjct: 21 SSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSK 80
Query: 92 GCGFVQFANSLGQIMAINGVGHTMEGKFMMVMGMLFRHQMTQACTLQQLRPM 143
G GFV F N + + I G GK + +G R Q A +Q RP+
Sbjct: 81 GYGFVSFVNDV-DVQKIVGSQIHFHGK-KLKLGPAIRKQKLCARHVQP-RPL 129
>UNIPROTKB|Q49AS9 [details] [associations]
symbol:TIAL1 "Nucleolysin TIAR" species:9606 "Homo sapiens"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 KO:K13201 EMBL:AC012468
HOVERGEN:HBG105006 RefSeq:NP_001029097.1 RefSeq:NP_003243.1
UniGene:Hs.501203 GeneID:7073 KEGG:hsa:7073 CTD:7073
HGNC:HGNC:11804 PharmGKB:PA36513 ChiTaRS:TIAL1 GenomeRNAi:7073
NextBio:27661 EMBL:BC030025 IPI:IPI01013673 SMR:Q49AS9
STRING:Q49AS9 Ensembl:ENST00000369092 UCSC:uc001lek.1
Uniprot:Q49AS9
Length = 252
Score = 112 (44.5 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 24/70 (34%), Positives = 40/70 (57%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
++ N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ AI
Sbjct: 75 NQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAI 134
Query: 109 NGV-GHTMEG 117
V G T+EG
Sbjct: 135 VSVNGTTIEG 144
>UNIPROTKB|E7ETR3 [details] [associations]
symbol:DAZ3 "Deleted in azoospermia protein 3" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 HGNC:HGNC:15965
EMBL:AC010089 IPI:IPI00872074 ProteinModelPortal:E7ETR3 SMR:E7ETR3
Ensembl:ENST00000315357 ArrayExpress:E7ETR3 Bgee:E7ETR3
Uniprot:E7ETR3
Length = 366
Score = 115 (45.5 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 37/112 (33%), Positives = 53/112 (47%)
Query: 38 ASNGAPGQG-PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-----PVGK 91
+S+ A QG EG T+FVGG+D + + ++ F +YG + VKI V K
Sbjct: 21 SSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSK 80
Query: 92 GCGFVQFANSLGQIMAINGVGHTMEGKFMMVMGMLFRHQMTQACTLQQLRPM 143
G GFV F N + + I G GK + +G R Q A +Q RP+
Sbjct: 81 GYGFVSFVNDV-DVQKIVGSQIHFHGK-KLKLGPAIRKQKLCARHVQP-RPL 129
>UNIPROTKB|E7EU30 [details] [associations]
symbol:DAZ4 "Deleted in azoospermia protein 4" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC006338
HGNC:HGNC:15966 ChiTaRS:DAZ4 EMBL:AC006982 EMBL:AC010089
IPI:IPI00930462 ProteinModelPortal:E7EU30 SMR:E7EU30 PRIDE:E7EU30
Ensembl:ENST00000382314 ArrayExpress:E7EU30 Bgee:E7EU30
Uniprot:E7EU30
Length = 366
Score = 115 (45.5 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 37/112 (33%), Positives = 53/112 (47%)
Query: 38 ASNGAPGQG-PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-----PVGK 91
+S+ A QG EG T+FVGG+D + + ++ F +YG + VKI V K
Sbjct: 21 SSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSK 80
Query: 92 GCGFVQFANSLGQIMAINGVGHTMEGKFMMVMGMLFRHQMTQACTLQQLRPM 143
G GFV F N + + I G GK + +G R Q A +Q RP+
Sbjct: 81 GYGFVSFVNDV-DVQKIVGSQIHFHGK-KLKLGPAIRKQKLCARHVQP-RPL 129
>UNIPROTKB|E7EU39 [details] [associations]
symbol:DAZ2 "Deleted in azoospermia protein 4" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC006338
RefSeq:NP_001005786.2 UniGene:Hs.592257 GeneID:57055 KEGG:hsa:57055
CTD:57055 HGNC:HGNC:15964 GenomeRNAi:57055 NextBio:62832
HGNC:HGNC:15966 EMBL:AC006983 EMBL:AC007039 EMBL:AC053490
EMBL:AC006982 EMBL:AC010089 IPI:IPI00974525 SMR:E7EU39
Ensembl:ENST00000382294 Ensembl:ENST00000415508 UCSC:uc004fvo.3
Uniprot:E7EU39
Length = 366
Score = 115 (45.5 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 37/112 (33%), Positives = 53/112 (47%)
Query: 38 ASNGAPGQG-PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-----PVGK 91
+S+ A QG EG T+FVGG+D + + ++ F +YG + VKI V K
Sbjct: 21 SSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSK 80
Query: 92 GCGFVQFANSLGQIMAINGVGHTMEGKFMMVMGMLFRHQMTQACTLQQLRPM 143
G GFV F N + + I G GK + +G R Q A +Q RP+
Sbjct: 81 GYGFVSFVNDV-DVQKIVGSQIHFHGK-KLKLGPAIRKQKLCARHVQP-RPL 129
>UNIPROTKB|E7ENA5 [details] [associations]
symbol:DAZ4 "Deleted in azoospermia protein 4" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC006338
HGNC:HGNC:15966 ChiTaRS:DAZ4 EMBL:AC006982 EMBL:AC010089
IPI:IPI00936003 SMR:E7ENA5 Ensembl:ENST00000382432
Ensembl:ENST00000400494 UCSC:uc022coz.1 Uniprot:E7ENA5
Length = 382
Score = 115 (45.5 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 37/112 (33%), Positives = 53/112 (47%)
Query: 38 ASNGAPGQG-PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-----PVGK 91
+S+ A QG EG T+FVGG+D + + ++ F +YG + VKI V K
Sbjct: 21 SSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSK 80
Query: 92 GCGFVQFANSLGQIMAINGVGHTMEGKFMMVMGMLFRHQMTQACTLQQLRPM 143
G GFV F N + + I G GK + +G R Q A +Q RP+
Sbjct: 81 GYGFVSFVNDV-DVQKIVGSQIHFHGK-KLKLGPAIRKQKLCARHVQP-RPL 129
>UNIPROTKB|Q92904 [details] [associations]
symbol:DAZL "Deleted in azoospermia-like" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008494 "translation activator activity"
evidence=IDA] [GO:0045948 "positive regulation of translational
initiation" evidence=IDA] [GO:0007281 "germ cell development"
evidence=TAS] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0007275 GO:GO:0005634
GO:GO:0005737 GO:GO:0000166 EMBL:CH471055 Gene3D:3.30.70.330
GO:GO:0007283 GO:GO:0003723 GO:GO:0008494 GO:GO:0003730
GO:GO:0007281 GO:GO:0005844 GO:GO:0045836 eggNOG:NOG260394
GO:GO:0045948 OrthoDB:EOG4T783S CTD:1618 HOVERGEN:HBG000573
HOGENOM:HOG000246400 EMBL:U65918 EMBL:U66726 EMBL:U66078
EMBL:U77476 EMBL:U77467 EMBL:U77468 EMBL:U77469 EMBL:U77470
EMBL:U77471 EMBL:U77472 EMBL:U77473 EMBL:U77474 EMBL:U77475
EMBL:AK303026 EMBL:BX648638 EMBL:AC010139 EMBL:BC027595
IPI:IPI00871660 RefSeq:NP_001177740.1 RefSeq:NP_001342.2
UniGene:Hs.131179 ProteinModelPortal:Q92904 SMR:Q92904
IntAct:Q92904 STRING:Q92904 PhosphoSite:Q92904 DMDM:27805453
PRIDE:Q92904 DNASU:1618 Ensembl:ENST00000250863
Ensembl:ENST00000399444 GeneID:1618 KEGG:hsa:1618 UCSC:uc003cbb.3
GeneCards:GC03M016603 HGNC:HGNC:2685 HPA:HPA019593 HPA:HPA019777
MIM:601486 neXtProt:NX_Q92904 PharmGKB:PA27155 OMA:YVIPPAY
GenomeRNAi:1618 NextBio:6646 ArrayExpress:Q92904 Bgee:Q92904
CleanEx:HS_DAZL Genevestigator:Q92904 GermOnline:ENSG00000092345
Uniprot:Q92904
Length = 295
Score = 113 (44.8 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 37/112 (33%), Positives = 54/112 (48%)
Query: 38 ASNGAPGQGP-QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-----PVGK 91
+S+ A QG EG T+FVGG+D + + ++R F++YG + VKI V K
Sbjct: 21 SSSAATSQGYILPEGKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSK 80
Query: 92 GCGFVQFANSLGQIMAINGVGHTMEGKFMMVMGMLFRHQMTQACTLQQLRPM 143
G GFV F N + + I GK + +G R Q A +Q RP+
Sbjct: 81 GYGFVSFFNDV-DVQKIVESQINFHGK-KLKLGPAIRKQNLCAYHVQP-RPL 129
>UNIPROTKB|E7ERQ6 [details] [associations]
symbol:DAZ3 "Deleted in azoospermia protein 3" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 HGNC:HGNC:15965
EMBL:AC010089 IPI:IPI00942002 ProteinModelPortal:E7ERQ6 SMR:E7ERQ6
Ensembl:ENST00000446723 ArrayExpress:E7ERQ6 Bgee:E7ERQ6
Uniprot:E7ERQ6
Length = 390
Score = 115 (45.5 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 37/112 (33%), Positives = 53/112 (47%)
Query: 38 ASNGAPGQG-PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-----PVGK 91
+S+ A QG EG T+FVGG+D + + ++ F +YG + VKI V K
Sbjct: 21 SSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSK 80
Query: 92 GCGFVQFANSLGQIMAINGVGHTMEGKFMMVMGMLFRHQMTQACTLQQLRPM 143
G GFV F N + + I G GK + +G R Q A +Q RP+
Sbjct: 81 GYGFVSFVNDV-DVQKIVGSQIHFHGK-KLKLGPAIRKQKLCARHVQP-RPL 129
>UNIPROTKB|E7EU33 [details] [associations]
symbol:DAZ4 "Deleted in azoospermia protein 4" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC006338
HGNC:HGNC:15966 ChiTaRS:DAZ4 EMBL:AC006982 EMBL:AC010089
IPI:IPI00639994 SMR:E7EU33 Ensembl:ENST00000382296
Ensembl:ENST00000382305 Uniprot:E7EU33
Length = 390
Score = 115 (45.5 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 37/112 (33%), Positives = 53/112 (47%)
Query: 38 ASNGAPGQG-PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-----PVGK 91
+S+ A QG EG T+FVGG+D + + ++ F +YG + VKI V K
Sbjct: 21 SSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSK 80
Query: 92 GCGFVQFANSLGQIMAINGVGHTMEGKFMMVMGMLFRHQMTQACTLQQLRPM 143
G GFV F N + + I G GK + +G R Q A +Q RP+
Sbjct: 81 GYGFVSFVNDV-DVQKIVGSQIHFHGK-KLKLGPAIRKQKLCARHVQP-RPL 129
>ASPGD|ASPL0000065382 [details] [associations]
symbol:AN7480 species:162425 "Emericella nidulans"
[GO:0005829 "cytosol" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0031138 "negative regulation of conjugation with
cellular fusion" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AACD01000129
EMBL:BN001304 eggNOG:NOG314315 OrthoDB:EOG4X0R20 InterPro:IPR018835
Pfam:PF10378 RefSeq:XP_680749.1 ProteinModelPortal:Q5AW50
STRING:Q5AW50 EnsemblFungi:CADANIAT00000573 GeneID:2869659
KEGG:ani:AN7480.2 HOGENOM:HOG000162816 OMA:HPETTIE Uniprot:Q5AW50
Length = 830
Score = 119 (46.9 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 29/68 (42%), Positives = 37/68 (54%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
S G S N ++VG LD + ++ LRQ FS+YGEI V K C FV F N I AI
Sbjct: 496 SGGASRN--VYVGNLDESWAEDRLRQDFSEYGEIELVNTLREKSCAFVNFTNIANAIKAI 553
Query: 109 NGVGHTME 116
G+ + E
Sbjct: 554 EGMRNREE 561
>UNIPROTKB|Q6P616 [details] [associations]
symbol:rbm22 "Pre-mRNA-splicing factor RBM22" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0017069 "snRNA binding"
evidence=ISS] [GO:0033120 "positive regulation of RNA splicing"
evidence=ISS] [GO:0036002 "pre-mRNA binding" evidence=ISS]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISS]
InterPro:IPR000504 InterPro:IPR000571 InterPro:IPR012677
PROSITE:PS50102 PROSITE:PS50103 SMART:SM00356 SMART:SM00360
GO:GO:0007275 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0005681
GO:GO:0017069 eggNOG:NOG277760 HOGENOM:HOG000171086 KO:K12872
OMA:RNRAHIC GO:GO:0045292 GO:GO:0036002 GO:GO:0033120 CTD:55696
HOVERGEN:HBG083475 OrthoDB:EOG40S0FW HSSP:Q6PHZ5
GeneTree:ENSGT00390000002792 EMBL:CR761977 EMBL:BC062518
RefSeq:NP_989108.1 UniGene:Str.5987 ProteinModelPortal:Q6P616
SMR:Q6P616 STRING:Q6P616 Ensembl:ENSXETT00000044114 GeneID:394713
KEGG:xtr:394713 Xenbase:XB-GENE-971198 InParanoid:Q6P616
Bgee:Q6P616 Uniprot:Q6P616
Length = 417
Score = 115 (45.5 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMA 107
D S TT++VGGL +++ +LR F Q+GEI ++ + + C F+QFA MA
Sbjct: 228 DKSITTLYVGGLGDTISESELRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEMA 283
>DICTYBASE|DDB_G0277875 [details] [associations]
symbol:ssbA "ssRNA-binding protein" species:44689
"Dictyostelium discoideum" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 dictyBase:DDB_G0277875 GO:GO:0000166
GenomeReviews:CM000152_GR EMBL:AAFI02000023 Gene3D:3.30.70.330
GO:GO:0003676 eggNOG:NOG306795 RefSeq:XP_642055.1
ProteinModelPortal:Q54YZ7 EnsemblProtists:DDB0214897 GeneID:8621267
KEGG:ddi:DDB_G0277875 InParanoid:Q54YZ7 ProtClustDB:CLSZ2846831
Uniprot:Q54YZ7
Length = 286
Score = 112 (44.5 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 32/77 (41%), Positives = 43/77 (55%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGK--GCGFVQFANSLG 103
+E D ++ IFVG L +VT+E LRQ F +Y K+ VGK G GFV F++S
Sbjct: 193 AEWDPNDFRIFVGDLGNDVTEEMLRQAFLKYPTFLKAKVIFDKVGKSRGFGFVSFSSSSD 252
Query: 104 QIMAINGVGHTMEGKFM 120
I A N TM GK++
Sbjct: 253 YISAFN----TMNGKYI 265
>UNIPROTKB|E7ENA6 [details] [associations]
symbol:DAZ2 "Deleted in azoospermia protein 2" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 HGNC:HGNC:15964
EMBL:AC006983 EMBL:AC007039 EMBL:AC053490 IPI:IPI00942959
ProteinModelPortal:E7ENA6 SMR:E7ENA6 Ensembl:ENST00000400493
ArrayExpress:E7ENA6 Bgee:E7ENA6 Uniprot:E7ENA6
Length = 438
Score = 115 (45.5 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 37/112 (33%), Positives = 53/112 (47%)
Query: 38 ASNGAPGQG-PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-----PVGK 91
+S+ A QG EG T+FVGG+D + + ++ F +YG + VKI V K
Sbjct: 21 SSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSK 80
Query: 92 GCGFVQFANSLGQIMAINGVGHTMEGKFMMVMGMLFRHQMTQACTLQQLRPM 143
G GFV F N + + I G GK + +G R Q A +Q RP+
Sbjct: 81 GYGFVSFVNDV-DVQKIVGSQIHFHGK-KLKLGPAIRKQKLCARHVQP-RPL 129
>MGI|MGI:107914 [details] [associations]
symbol:Tia1 "cytotoxic granule-associated RNA binding protein
1" species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=IDA] [GO:0017091 "AU-rich element binding"
evidence=IDA] [GO:0017148 "negative regulation of translation"
evidence=IMP] [GO:0042036 "negative regulation of cytokine
biosynthetic process" evidence=IMP] [GO:0048024 "regulation of mRNA
splicing, via spliceosome" evidence=ISO] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
MGI:MGI:107914 GO:GO:0005634 GO:GO:0006915 GO:GO:0017148
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0042036
GO:GO:0048024 GO:GO:0010494 eggNOG:COG0724 HOGENOM:HOG000206748
KO:K13201 CTD:7072 HOVERGEN:HBG105006 OrthoDB:EOG4B5P59 EMBL:U00689
EMBL:U55862 IPI:IPI00132462 PIR:S72435 RefSeq:NP_035715.1
UniGene:Mm.333219 PDB:2DGO PDB:2RNE PDBsum:2DGO PDBsum:2RNE
ProteinModelPortal:P52912 SMR:P52912 STRING:P52912
PhosphoSite:P52912 PaxDb:P52912 PRIDE:P52912
Ensembl:ENSMUST00000095753 GeneID:21841 KEGG:mmu:21841
InParanoid:P52912 OMA:TSAPWMG EvolutionaryTrace:P52912
NextBio:301304 Bgee:P52912 Genevestigator:P52912
GermOnline:ENSMUSG00000071337 Uniprot:P52912
Length = 386
Score = 114 (45.2 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 24/70 (34%), Positives = 42/70 (60%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
S+ +N T++ GG+ +T++ +RQ FS +G+I +++ KG FV+F++ AI
Sbjct: 207 SQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFSSHESAAHAI 266
Query: 109 NGV-GHTMEG 117
V G T+EG
Sbjct: 267 VSVNGTTIEG 276
>TAIR|locus:2025077 [details] [associations]
symbol:MAC5A "MOS4-associated complex subunit 5A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0042742 "defense response to bacterium"
evidence=IGI] InterPro:IPR000504 InterPro:IPR000571
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 PROSITE:PS50103
SMART:SM00356 SMART:SM00360 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0000166 GO:GO:0046872 GO:GO:0003677
GO:GO:0042742 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003723
eggNOG:NOG277760 HOGENOM:HOG000171086 KO:K12872
ProtClustDB:CLSN2913258 EMBL:AC022464 EMBL:AY054519 EMBL:AY114632
IPI:IPI00518267 PIR:F86208 RefSeq:NP_563788.1 UniGene:At.25418
HSSP:P18615 ProteinModelPortal:Q9LNV5 SMR:Q9LNV5 IntAct:Q9LNV5
STRING:Q9LNV5 PaxDb:Q9LNV5 PRIDE:Q9LNV5 EnsemblPlants:AT1G07360.1
GeneID:837248 KEGG:ath:AT1G07360 TAIR:At1g07360 InParanoid:Q9LNV5
OMA:ILADKAC PhylomeDB:Q9LNV5 Genevestigator:Q9LNV5 Uniprot:Q9LNV5
Length = 481
Score = 115 (45.5 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 21/56 (37%), Positives = 34/56 (60%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLG 103
+S D S T++VGGL+ + ++D+R F +GEI S++I K C FV + + G
Sbjct: 220 ESPDDESIKTLYVGGLNSRILEQDIRDQFYAHGEIESIRILADKACAFVTYTSREG 275
>UNIPROTKB|I3L0B6 [details] [associations]
symbol:DAZ2 "Deleted in azoospermia protein 2" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 HGNC:HGNC:15964
EMBL:AC006983 EMBL:AC007039 EMBL:AC053490 ProteinModelPortal:I3L0B6
SMR:I3L0B6 Ensembl:ENST00000382431 Bgee:I3L0B6 Uniprot:I3L0B6
Length = 486
Score = 115 (45.5 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 37/112 (33%), Positives = 53/112 (47%)
Query: 38 ASNGAPGQG-PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-----PVGK 91
+S+ A QG EG T+FVGG+D + + ++ F +YG + VKI V K
Sbjct: 21 SSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSK 80
Query: 92 GCGFVQFANSLGQIMAINGVGHTMEGKFMMVMGMLFRHQMTQACTLQQLRPM 143
G GFV F N + + I G GK + +G R Q A +Q RP+
Sbjct: 81 GYGFVSFVNDV-DVQKIVGSQIHFHGK-KLKLGPAIRKQKLCARHVQP-RPL 129
>UNIPROTKB|Q9NR90 [details] [associations]
symbol:DAZ3 "Deleted in azoospermia protein 3" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0007275 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0007283 GO:GO:0003723 EMBL:AC006338 UniGene:Hs.70936
MIM:415000 Orphanet:1646 eggNOG:KOG0118 HOVERGEN:HBG048860
UniGene:Hs.592257 HOGENOM:HOG000112149 GermOnline:ENSG00000205944
EMBL:AF248481 EMBL:BC113005 IPI:IPI00006501 IPI:IPI00742060
RefSeq:NP_065097.2 ProteinModelPortal:Q9NR90 SMR:Q9NR90
STRING:Q9NR90 PhosphoSite:Q9NR90 DMDM:44887842 PRIDE:Q9NR90
Ensembl:ENST00000382365 GeneID:57054 KEGG:hsa:57054 UCSC:uc004fvs.3
UCSC:uc004fvw.3 CTD:57054 GeneCards:GC0YM026909 H-InvDB:HIX0093747
HGNC:HGNC:15965 MIM:400027 neXtProt:NX_Q9NR90 PharmGKB:PA27151
OrthoDB:EOG4T783S GenomeRNAi:57054 NextBio:62828
ArrayExpress:Q9NR90 Bgee:Q9NR90 Genevestigator:Q9NR90
Uniprot:Q9NR90
Length = 486
Score = 115 (45.5 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 37/112 (33%), Positives = 53/112 (47%)
Query: 38 ASNGAPGQG-PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-----PVGK 91
+S+ A QG EG T+FVGG+D + + ++ F +YG + VKI V K
Sbjct: 21 SSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSK 80
Query: 92 GCGFVQFANSLGQIMAINGVGHTMEGKFMMVMGMLFRHQMTQACTLQQLRPM 143
G GFV F N + + I G GK + +G R Q A +Q RP+
Sbjct: 81 GYGFVSFVNDV-DVQKIVGSQIHFHGK-KLKLGPAIRKQKLCARHVQP-RPL 129
>UNIPROTKB|K7EQ02 [details] [associations]
symbol:DAZAP1 "DAZ-associated protein 1" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
Gene3D:3.30.70.330 HGNC:HGNC:2683 EMBL:AC005329 EMBL:AC027307
Ensembl:ENST00000592453 Uniprot:K7EQ02
Length = 225
Score = 109 (43.4 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 29/69 (42%), Positives = 39/69 (56%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFA--NSLGQIMAIN 109
+FVGGLD + T E LR FSQYGE+ I K G GFV+F N +G ++A
Sbjct: 12 LFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASR 71
Query: 110 GVGHTMEGK 118
HT++G+
Sbjct: 72 P--HTLDGR 78
Score = 100 (40.3 bits), Expect = 0.00025, P = 0.00025
Identities = 30/101 (29%), Positives = 49/101 (48%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGC 93
+G +GP+S+ SN IFVGG+ N + +LR+ F ++G + V + +G
Sbjct: 76 DGRNQKGPRSDNSKSNK-IFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGF 134
Query: 94 GFVQFANSLGQIMAINGVGHTMEGKFMMVMGMLFRHQMTQA 134
GF+ F + A+N H + GK + V R +QA
Sbjct: 135 GFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQA 175
>UNIPROTKB|F1SF34 [details] [associations]
symbol:F1SF34 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00680000099967 EMBL:CU929885
Ensembl:ENSSSCT00000017014 OMA:SPDIETH Uniprot:F1SF34
Length = 250
Score = 110 (43.8 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 24/71 (33%), Positives = 41/71 (57%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
++ S N T++ GG+ +TD+ +RQ FS +G+I +++ K FV+F+ AI
Sbjct: 76 NQSSSKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKRYSFVRFSTHGSAAHAI 135
Query: 109 NGV-GHTMEGK 118
V G T+EG+
Sbjct: 136 VSVTGTTIEGR 146
>ZFIN|ZDB-GENE-000405-6 [details] [associations]
symbol:dazl "deleted in azoospermia-like"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA;IDA] [GO:0008494
"translation activator activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0043565 "sequence-specific DNA
binding" evidence=IMP] [GO:0060965 "negative regulation of gene
silencing by miRNA" evidence=IDA] [GO:0070935 "3'-UTR-mediated mRNA
stabilization" evidence=IDA] [GO:0003730 "mRNA 3'-UTR binding"
evidence=IDA] [GO:0010628 "positive regulation of gene expression"
evidence=IDA] [GO:0045495 "pole plasm" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0048477 "oogenesis" evidence=IEA] [GO:0006417
"regulation of translation" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-000405-6 GO:GO:0007275 GO:GO:0005737 GO:GO:0030154
GO:GO:0000166 GO:GO:0043565 Gene3D:3.30.70.330 GO:GO:0048477
GO:GO:0007283 GO:GO:0008494 GO:GO:0003730 GO:GO:0010628
eggNOG:NOG260394 GO:GO:0070935 OrthoDB:EOG4T783S CTD:1618
HOGENOM:HOG000246400 EMBL:AB018191 EMBL:BC076423 IPI:IPI00503000
RefSeq:NP_571599.1 UniGene:Dr.81259 ProteinModelPortal:Q9YGW7
STRING:Q9YGW7 GeneID:58039 KEGG:dre:58039 HOVERGEN:HBG048864
InParanoid:Q9YGW7 NextBio:20892303 ArrayExpress:Q9YGW7
GO:GO:0060965 Uniprot:Q9YGW7
Length = 229
Score = 109 (43.4 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 27/98 (27%), Positives = 52/98 (53%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-----PVGKGCGFVQFANSLGQ 104
EG + T+FVGG+D V + ++R+ F++YG + VKI + KG GFV F+ +
Sbjct: 41 EGKMTPNTLFVGGIDMKVDENEIREFFAKYGSVKEVKIITYRGGICKGYGFVYFSEDV-D 99
Query: 105 IMAINGVGHTMEGKFMMVMGMLFRHQMTQACTLQQLRP 142
I I + +GK + + + + + +++ + + P
Sbjct: 100 IQTIVDQPISFKGKKLKLGPAIMKERSSRSVSSPMIGP 137
>UNIPROTKB|E9PTS0 [details] [associations]
symbol:Hnrnpab "Protein Hnrnpab" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:69255 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
InterPro:IPR012956 Pfam:PF08143 EMBL:AC105470 IPI:IPI00951862
Ensembl:ENSRNOT00000065584 ArrayExpress:E9PTS0 Uniprot:E9PTS0
Length = 331
Score = 102 (41.0 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 30/91 (32%), Positives = 47/91 (51%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV----GKGCGFVQFANSLGQIMAINGVGH 113
IFVGGL+P T+E +R+ F Q+GEI ++++P+ K GFV F + + V
Sbjct: 160 IFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFV-FITFKEE----DPVKK 214
Query: 114 TMEGKFMMVMGMLFRHQMTQACTLQQLRPMG 144
+E KF V G ++ Q + Q + G
Sbjct: 215 VLEKKFHTVSGSKCEIKVAQPKEVYQQQQYG 245
Score = 34 (17.0 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 8/22 (36%), Positives = 10/22 (45%)
Query: 42 APGQGPQSE-GDSSNTTIFVGG 62
+PG GP + G TT G
Sbjct: 33 SPGSGPATPAGSGGGTTAAPSG 54
>UNIPROTKB|Q13117 [details] [associations]
symbol:DAZ2 "Deleted in azoospermia protein 2" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007338 "single fertilization" evidence=TAS]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0007275 GO:GO:0005634 GO:GO:0005737
GO:GO:0030154 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0007283
GO:GO:0003723 GO:GO:0007338 EMBL:AC006338 MIM:415000 Orphanet:1646
eggNOG:KOG0118 HOVERGEN:HBG048860 EMBL:U21663 EMBL:AF248480
EMBL:AF414184 EMBL:BC113006 IPI:IPI00006498 IPI:IPI00382559
IPI:IPI00401964 PIR:I38963 RefSeq:NP_001005785.1
RefSeq:NP_001005786.2 RefSeq:NP_065096.2 UniGene:Hs.592257
ProteinModelPortal:Q13117 SMR:Q13117 STRING:Q13117
PhosphoSite:Q13117 DMDM:218512098 PRIDE:Q13117
Ensembl:ENST00000382306 Ensembl:ENST00000382433
Ensembl:ENST00000382449 GeneID:57055 KEGG:hsa:57055 UCSC:uc004fvq.3
UCSC:uc022col.1 CTD:57055 GeneCards:GC0YP025365 H-InvDB:HIX0056667
HGNC:HGNC:15964 MIM:400026 neXtProt:NX_Q13117 PharmGKB:PA27150
HOGENOM:HOG000112149 OrthoDB:EOG43N7FJ GenomeRNAi:57055
NextBio:62832 ArrayExpress:Q13117 Bgee:Q13117 CleanEx:HS_DAZ2
Genevestigator:Q13117 GermOnline:ENSG00000205944 Uniprot:Q13117
Length = 558
Score = 115 (45.5 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 37/112 (33%), Positives = 53/112 (47%)
Query: 38 ASNGAPGQG-PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-----PVGK 91
+S+ A QG EG T+FVGG+D + + ++ F +YG + VKI V K
Sbjct: 21 SSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSK 80
Query: 92 GCGFVQFANSLGQIMAINGVGHTMEGKFMMVMGMLFRHQMTQACTLQQLRPM 143
G GFV F N + + I G GK + +G R Q A +Q RP+
Sbjct: 81 GYGFVSFVNDV-DVQKIVGSQIHFHGK-KLKLGPAIRKQKLCARHVQP-RPL 129
>UNIPROTKB|Q86SG3 [details] [associations]
symbol:DAZ4 "Deleted in azoospermia protein 4" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0007275 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0007283 GO:GO:0003723 EMBL:AC006338 UniGene:Hs.522868
UniGene:Hs.70936 MIM:400003 MIM:415000 Orphanet:1646
HOVERGEN:HBG048860 GermOnline:ENSG00000188120 EMBL:AF248482
EMBL:AF248483 EMBL:BC047480 EMBL:BC047617 IPI:IPI00160336
IPI:IPI00401506 RefSeq:NP_001005375.1 RefSeq:NP_065153.1
ProteinModelPortal:Q86SG3 SMR:Q86SG3 STRING:Q86SG3
PhosphoSite:Q86SG3 DMDM:44887840 PRIDE:Q86SG3
Ensembl:ENST00000440066 Ensembl:ENST00000449750 GeneID:57135
KEGG:hsa:57135 UCSC:uc004fvm.3 UCSC:uc004fvn.3 CTD:57135
GeneCards:GC0YP026979 HGNC:HGNC:15966 neXtProt:NX_Q86SG3
PharmGKB:PA27152 InParanoid:Q86SG3 ChiTaRS:DAZ4 GenomeRNAi:57135
NextBio:63055 ArrayExpress:Q86SG3 Bgee:Q86SG3 CleanEx:HS_DAZ4
Genevestigator:Q86SG3 Uniprot:Q86SG3
Length = 579
Score = 115 (45.5 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 37/112 (33%), Positives = 53/112 (47%)
Query: 38 ASNGAPGQG-PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-----PVGK 91
+S+ A QG EG T+FVGG+D + + ++ F +YG + VKI V K
Sbjct: 186 SSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSK 245
Query: 92 GCGFVQFANSLGQIMAINGVGHTMEGKFMMVMGMLFRHQMTQACTLQQLRPM 143
G GFV F N + + I G GK + +G R Q A +Q RP+
Sbjct: 246 GYGFVSFVNDV-DVQKIVGSQIHFHGK-KLKLGPAIRKQKLCARHVQP-RPL 294
Score = 115 (45.5 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 37/112 (33%), Positives = 53/112 (47%)
Query: 38 ASNGAPGQG-PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-----PVGK 91
+S+ A QG EG T+FVGG+D + + ++ F +YG + VKI V K
Sbjct: 21 SSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSK 80
Query: 92 GCGFVQFANSLGQIMAINGVGHTMEGKFMMVMGMLFRHQMTQACTLQQLRPM 143
G GFV F N + + I G GK + +G R Q A +Q RP+
Sbjct: 81 GYGFVSFVNDV-DVQKIVGSQIHFHGK-KLKLGPAIRKQKLCARHVQP-RPL 129
>UNIPROTKB|Q7ZXB5 [details] [associations]
symbol:rbm22 "Pre-mRNA-splicing factor RBM22" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0017069 "snRNA binding" evidence=ISS]
[GO:0033120 "positive regulation of RNA splicing" evidence=ISS]
[GO:0036002 "pre-mRNA binding" evidence=ISS] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=ISS] InterPro:IPR000504
InterPro:IPR000571 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
PROSITE:PS50103 SMART:SM00356 SMART:SM00360 GO:GO:0007275
GO:GO:0005634 GO:GO:0005737 GO:GO:0000166 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0017069
KO:K12872 GO:GO:0045292 GO:GO:0036002 GO:GO:0033120 CTD:55696
HOVERGEN:HBG083475 HSSP:Q6PHZ5 EMBL:BC045067 RefSeq:NP_001080776.1
UniGene:Xl.4959 ProteinModelPortal:Q7ZXB5 SMR:Q7ZXB5 GeneID:380469
KEGG:xla:380469 Xenbase:XB-GENE-971204 Uniprot:Q7ZXB5
Length = 417
Score = 113 (44.8 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 20/48 (41%), Positives = 32/48 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D S TT++VGGL +++ +LR F Q+GEI ++ + + C F+QFA
Sbjct: 228 DKSITTLYVGGLGDTISESELRNHFYQFGEIRTITVVQRQQCAFIQFA 275
>UNIPROTKB|D4A964 [details] [associations]
symbol:Tial1 "Protein Tial1" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:1595845 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
IPI:IPI00949247 Ensembl:ENSRNOT00000066938 Uniprot:D4A964
Length = 368
Score = 112 (44.5 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 24/70 (34%), Positives = 40/70 (57%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
++ N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ AI
Sbjct: 215 NQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAI 274
Query: 109 NGV-GHTMEG 117
V G T+EG
Sbjct: 275 VSVNGTTIEG 284
Score = 108 (43.1 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 29/87 (33%), Positives = 46/87 (52%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI----PVGK--GC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ GK G
Sbjct: 98 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 157
Query: 94 GFVQFANSLGQIMAINGVGHTMEGKFM 120
GFV F N L A N + H M G+++
Sbjct: 158 GFVSFYNKLD---AENAIVH-MGGQWL 180
>UNIPROTKB|F5H3W3 [details] [associations]
symbol:DAZ2 "Deleted in azoospermia protein 2" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 HGNC:HGNC:15964
EMBL:AC006983 EMBL:AC007039 EMBL:AC053490 IPI:IPI00985133
ProteinModelPortal:F5H3W3 SMR:F5H3W3 Ensembl:ENST00000382424
ArrayExpress:F5H3W3 Bgee:F5H3W3 Uniprot:F5H3W3
Length = 606
Score = 115 (45.5 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 37/112 (33%), Positives = 53/112 (47%)
Query: 38 ASNGAPGQG-PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-----PVGK 91
+S+ A QG EG T+FVGG+D + + ++ F +YG + VKI V K
Sbjct: 21 SSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSK 80
Query: 92 GCGFVQFANSLGQIMAINGVGHTMEGKFMMVMGMLFRHQMTQACTLQQLRPM 143
G GFV F N + + I G GK + +G R Q A +Q RP+
Sbjct: 81 GYGFVSFVNDV-DVQKIVGSQIHFHGK-KLKLGPAIRKQKLCARHVQP-RPL 129
>UNIPROTKB|F1LQ36 [details] [associations]
symbol:Tial1 "Protein Tial1" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007281 "germ cell
development" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=IEA] [GO:0017091 "AU-rich element binding"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 RGD:1595845 GO:GO:0005634 GO:GO:0000166 GO:GO:0008284
Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0007281 GO:GO:0010494
GO:GO:0017145 GeneTree:ENSGT00680000099967 IPI:IPI00555194
Ensembl:ENSRNOT00000027463 Uniprot:F1LQ36
Length = 371
Score = 112 (44.5 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 24/70 (34%), Positives = 40/70 (57%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
++ N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ AI
Sbjct: 215 NQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAI 274
Query: 109 NGV-GHTMEG 117
V G T+EG
Sbjct: 275 VSVNGTTIEG 284
Score = 108 (43.1 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 29/87 (33%), Positives = 46/87 (52%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI----PVGK--GC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ GK G
Sbjct: 98 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 157
Query: 94 GFVQFANSLGQIMAINGVGHTMEGKFM 120
GFV F N L A N + H M G+++
Sbjct: 158 GFVSFYNKLD---AENAIVH-MGGQWL 180
>UNIPROTKB|Q1RMF9 [details] [associations]
symbol:DAZ1 "DAZ1 protein" species:9606 "Homo sapiens"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 RefSeq:NP_004072.3
UniGene:Hs.522868 UniGene:Hs.70936 GeneID:1617 KEGG:hsa:1617
CTD:1617 HGNC:HGNC:2682 PharmGKB:PA27149 HOVERGEN:HBG048860
GenomeRNAi:1617 NextBio:6642 EMBL:AC053490 EMBL:AC010088
EMBL:BC114927 IPI:IPI00942129 SMR:Q1RMF9 STRING:Q1RMF9
Ensembl:ENST00000382510 Uniprot:Q1RMF9
Length = 613
Score = 115 (45.5 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 37/112 (33%), Positives = 53/112 (47%)
Query: 38 ASNGAPGQG-PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-----PVGK 91
+S+ A QG EG T+FVGG+D + + ++ F +YG + VKI V K
Sbjct: 351 SSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSK 410
Query: 92 GCGFVQFANSLGQIMAINGVGHTMEGKFMMVMGMLFRHQMTQACTLQQLRPM 143
G GFV F N + + I G GK + +G R Q A +Q RP+
Sbjct: 411 GYGFVSFVNDV-DVQKIVGSQIHFHGK-KLKLGPAIRKQKLCARHVQP-RPL 459
Score = 115 (45.5 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 37/112 (33%), Positives = 53/112 (47%)
Query: 38 ASNGAPGQG-PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-----PVGK 91
+S+ A QG EG T+FVGG+D + + ++ F +YG + VKI V K
Sbjct: 186 SSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSK 245
Query: 92 GCGFVQFANSLGQIMAINGVGHTMEGKFMMVMGMLFRHQMTQACTLQQLRPM 143
G GFV F N + + I G GK + +G R Q A +Q RP+
Sbjct: 246 GYGFVSFVNDV-DVQKIVGSQIHFHGK-KLKLGPAIRKQKLCARHVQP-RPL 294
Score = 115 (45.5 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 37/112 (33%), Positives = 53/112 (47%)
Query: 38 ASNGAPGQG-PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-----PVGK 91
+S+ A QG EG T+FVGG+D + + ++ F +YG + VKI V K
Sbjct: 21 SSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSK 80
Query: 92 GCGFVQFANSLGQIMAINGVGHTMEGKFMMVMGMLFRHQMTQACTLQQLRPM 143
G GFV F N + + I G GK + +G R Q A +Q RP+
Sbjct: 81 GYGFVSFVNDV-DVQKIVGSQIHFHGK-KLKLGPAIRKQKLCARHVQP-RPL 129
>UNIPROTKB|Q01085 [details] [associations]
symbol:TIAL1 "Nucleolysin TIAR" species:9606 "Homo sapiens"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0007281 "germ cell
development" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0017091 "AU-rich element binding"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0010494 "cytoplasmic stress granule"
evidence=ISS] [GO:0003723 "RNA binding" evidence=TAS] [GO:0006952
"defense response" evidence=TAS] [GO:0005764 "lysosome"
evidence=TAS] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0006917 "induction of
apoptosis" evidence=TAS] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0006915 GO:GO:0006952 GO:GO:0006917 GO:GO:0000166
GO:GO:0008284 Gene3D:3.30.70.330 GO:GO:0006357 GO:GO:0005764
GO:GO:0003723 GO:GO:0017091 GO:GO:0007281 GO:GO:0010494
eggNOG:COG0724 GO:GO:0017145 HOGENOM:HOG000206748 KO:K13201
HOVERGEN:HBG105006 OrthoDB:EOG4B5P59 EMBL:M96954 EMBL:AK290695
EMBL:AK290984 IPI:IPI00005615 IPI:IPI00644708 PIR:A46174
RefSeq:NP_001029097.1 RefSeq:NP_003243.1 UniGene:Hs.501203 PDB:1X4G
PDB:2CQI PDB:2DH7 PDBsum:1X4G PDBsum:2CQI PDBsum:2DH7
ProteinModelPortal:Q01085 SMR:Q01085 DIP:DIP-42425N IntAct:Q01085
MINT:MINT-1203913 STRING:Q01085 PhosphoSite:Q01085 DMDM:267131
PaxDb:Q01085 PRIDE:Q01085 Ensembl:ENST00000369093
Ensembl:ENST00000436547 GeneID:7073 KEGG:hsa:7073 UCSC:uc001lei.1
CTD:7073 GeneCards:GC10M121324 HGNC:HGNC:11804 MIM:603413
neXtProt:NX_Q01085 PharmGKB:PA36513 OMA:EEVYNQS PhylomeDB:Q01085
ChiTaRS:TIAL1 EvolutionaryTrace:Q01085 GenomeRNAi:7073
NextBio:27661 ArrayExpress:Q01085 Bgee:Q01085 CleanEx:HS_TIAL1
Genevestigator:Q01085 GermOnline:ENSG00000151923 Uniprot:Q01085
Length = 375
Score = 112 (44.5 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 24/70 (34%), Positives = 40/70 (57%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
++ N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ AI
Sbjct: 198 NQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAI 257
Query: 109 NGV-GHTMEG 117
V G T+EG
Sbjct: 258 VSVNGTTIEG 267
Score = 108 (43.1 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 29/87 (33%), Positives = 46/87 (52%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI----PVGK--GC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ GK G
Sbjct: 81 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 140
Query: 94 GFVQFANSLGQIMAINGVGHTMEGKFM 120
GFV F N L A N + H M G+++
Sbjct: 141 GFVSFYNKLD---AENAIVH-MGGQWL 163
>RGD|1305742 [details] [associations]
symbol:Tia1 "TIA1 cytotoxic granule-associated RNA binding
protein" species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0010494 "cytoplasmic
stress granule" evidence=IEA;ISO] [GO:0017091 "AU-rich element
binding" evidence=IEA;ISO] [GO:0017148 "negative regulation of
translation" evidence=IEA;ISO] [GO:0042036 "negative regulation of
cytokine biosynthetic process" evidence=IEA;ISO] [GO:0048024
"regulation of mRNA splicing, via spliceosome" evidence=IEA;ISO]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 RGD:1305742 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:CH473957 eggNOG:COG0724
GeneTree:ENSGT00680000099967 HOGENOM:HOG000206748 KO:K13201
CTD:7072 HOVERGEN:HBG105006 EMBL:BC087064 IPI:IPI00563419
RefSeq:NP_001012096.1 UniGene:Rn.198158 SMR:Q5PQR7 STRING:Q5PQR7
Ensembl:ENSRNOT00000023103 GeneID:312510 KEGG:rno:312510
UCSC:RGD:1305742 NextBio:664964 Genevestigator:Q5PQR7
Uniprot:Q5PQR7
Length = 375
Score = 112 (44.5 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 23/70 (32%), Positives = 41/70 (58%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
S+ N T++ GG+ +T++ +RQ FS +G+I +++ KG F++F++ AI
Sbjct: 196 SQSSPGNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFIRFSSHESAAHAI 255
Query: 109 NGV-GHTMEG 117
V G T+EG
Sbjct: 256 VSVNGTTIEG 265
Score = 101 (40.6 bits), Expect = 0.00042, P = 0.00042
Identities = 26/79 (32%), Positives = 39/79 (49%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI----PVGK--GC 93
N A Q + S++ +FVG L P +T ED++ F+ +G I+ ++ GK G
Sbjct: 79 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGY 138
Query: 94 GFVQFANSLGQIMAINGVG 112
GFV F N AI +G
Sbjct: 139 GFVSFFNKWDAENAIQQMG 157
>UNIPROTKB|F2Z4H8 [details] [associations]
symbol:TIAL1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0017145 "stem cell division" evidence=IEA] [GO:0017091
"AU-rich element binding" evidence=IEA] [GO:0010494 "cytoplasmic
stress granule" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0007281 "germ cell
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0000166 GO:GO:0008284 Gene3D:3.30.70.330
GO:GO:0017091 GO:GO:0007281 GO:GO:0010494 GO:GO:0017145
GeneTree:ENSGT00680000099967 KO:K13201 CTD:7073 OMA:NGSKQLR
EMBL:DAAA02059399 IPI:IPI00707976 RefSeq:NP_001179985.1
UniGene:Bt.15754 ProteinModelPortal:F2Z4H8
Ensembl:ENSBTAT00000005331 GeneID:614540 KEGG:bta:614540
NextBio:20899153 Uniprot:F2Z4H8
Length = 380
Score = 112 (44.5 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 24/70 (34%), Positives = 40/70 (57%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
++ N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ AI
Sbjct: 198 NQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAI 257
Query: 109 NGV-GHTMEG 117
V G T+EG
Sbjct: 258 VSVNGTTIEG 267
Score = 108 (43.1 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 29/87 (33%), Positives = 46/87 (52%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI----PVGK--GC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ GK G
Sbjct: 81 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 140
Query: 94 GFVQFANSLGQIMAINGVGHTMEGKFM 120
GFV F N L A N + H M G+++
Sbjct: 141 GFVSFYNKLD---AENAIVH-MGGQWL 163
>UNIPROTKB|D4A6U8 [details] [associations]
symbol:Tia1 "Protein Tia1" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:1305742 GO:GO:0005634 GO:GO:0005737 GO:GO:0017148 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0042036 GO:GO:0048024
OrthoDB:EOG4B5P59 IPI:IPI00778030 ProteinModelPortal:D4A6U8
Ensembl:ENSRNOT00000041366 Uniprot:D4A6U8
Length = 382
Score = 112 (44.5 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 23/70 (32%), Positives = 41/70 (58%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
S+ N T++ GG+ +T++ +RQ FS +G+I +++ KG F++F++ AI
Sbjct: 203 SQSSPGNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFIRFSSHESAAHAI 262
Query: 109 NGV-GHTMEG 117
V G T+EG
Sbjct: 263 VSVNGTTIEG 272
>UNIPROTKB|F1NY49 [details] [associations]
symbol:374274 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007281 "germ cell
development" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=IEA] [GO:0017091 "AU-rich element binding"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0000166 GO:GO:0008284
Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0010494 GO:GO:0017145
GeneTree:ENSGT00680000099967 OMA:EEVYNQS EMBL:AADN02030982
IPI:IPI00575679 Ensembl:ENSGALT00000015349 ArrayExpress:F1NY49
Uniprot:F1NY49
Length = 388
Score = 112 (44.5 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 24/70 (34%), Positives = 40/70 (57%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
++ N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ AI
Sbjct: 214 NQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAI 273
Query: 109 NGV-GHTMEG 117
V G T+EG
Sbjct: 274 VSVNGTTIEG 283
Score = 108 (43.1 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 29/87 (33%), Positives = 46/87 (52%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI----PVGK--GC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ GK G
Sbjct: 97 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 156
Query: 94 GFVQFANSLGQIMAINGVGHTMEGKFM 120
GFV F N L A N + H M G+++
Sbjct: 157 GFVSFYNKLD---AENAIVH-MGGQWL 179
>UNIPROTKB|A3DUJ0 [details] [associations]
symbol:DAZL "Deleted in azoospermia-like transcript variant
1" species:9913 "Bos taurus" [GO:0045948 "positive regulation of
translational initiation" evidence=IEA] [GO:0045836 "positive
regulation of meiosis" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0008494 "translation activator activity"
evidence=IEA] [GO:0007281 "germ cell development" evidence=IEA]
[GO:0005844 "polysome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003730 "mRNA 3'-UTR binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0008494
GO:GO:0003730 GO:GO:0007281 GO:GO:0005844 GO:GO:0045836
eggNOG:NOG260394 GO:GO:0045948 GeneTree:ENSGT00530000063480
OrthoDB:EOG4T783S CTD:1618 HOVERGEN:HBG000573 HOGENOM:HOG000246400
OMA:YVIPPAY EMBL:DAAA02003725 EMBL:DQ408764 EMBL:DQ408765
EMBL:EF501823 IPI:IPI00706010 RefSeq:NP_001075194.1
UniGene:Bt.63695 STRING:A3DUJ0 Ensembl:ENSBTAT00000048665
GeneID:530116 KEGG:bta:530116 InParanoid:A3DUJ0 NextBio:20875183
Uniprot:A3DUJ0
Length = 295
Score = 110 (43.8 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 36/112 (32%), Positives = 53/112 (47%)
Query: 38 ASNGAPGQG-PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-----PVGK 91
+S+ QG EG T+FVGG+D + + ++R F++YG + VKI V K
Sbjct: 21 SSSATTSQGYVLPEGKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSK 80
Query: 92 GCGFVQFANSLGQIMAINGVGHTMEGKFMMVMGMLFRHQMTQACTLQQLRPM 143
G GFV F N + + I GK + +G R Q A +Q RP+
Sbjct: 81 GYGFVSFYNDV-DVQKIVESQINFHGK-KLKLGPAIRKQNLCAYHVQP-RPL 129
>UNIPROTKB|J9NTC5 [details] [associations]
symbol:DAZL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00530000063480 CTD:1618 OMA:YVIPPAY EMBL:AAEX03013583
RefSeq:XP_534251.3 Ensembl:ENSCAFT00000046462 GeneID:477055
KEGG:cfa:477055 Uniprot:J9NTC5
Length = 295
Score = 110 (43.8 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 36/112 (32%), Positives = 53/112 (47%)
Query: 38 ASNGAPGQG-PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-----PVGK 91
+S+ QG EG T+FVGG+D + + ++R F++YG + VKI V K
Sbjct: 21 SSSATTSQGYVLPEGKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSK 80
Query: 92 GCGFVQFANSLGQIMAINGVGHTMEGKFMMVMGMLFRHQMTQACTLQQLRPM 143
G GFV F N + + I GK + +G R Q A +Q RP+
Sbjct: 81 GYGFVSFYNDV-DVQKIVESQINFHGK-KLKLGPAIRKQNLCAYHVQP-RPL 129
>UNIPROTKB|F1NS94 [details] [associations]
symbol:374274 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007281 "germ cell
development" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=IEA] [GO:0017091 "AU-rich element binding"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0000166 GO:GO:0008284
Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0010494 GO:GO:0017145
GeneTree:ENSGT00680000099967 OMA:EEVYNQS EMBL:AADN02030982
IPI:IPI00681845 Ensembl:ENSGALT00000029737 ArrayExpress:F1NS94
Uniprot:F1NS94
Length = 389
Score = 112 (44.5 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 24/70 (34%), Positives = 40/70 (57%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
++ N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ AI
Sbjct: 215 NQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAI 274
Query: 109 NGV-GHTMEG 117
V G T+EG
Sbjct: 275 VSVNGTTIEG 284
Score = 108 (43.1 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 29/87 (33%), Positives = 46/87 (52%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI----PVGK--GC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ GK G
Sbjct: 98 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 157
Query: 94 GFVQFANSLGQIMAINGVGHTMEGKFM 120
GFV F N L A N + H M G+++
Sbjct: 158 GFVSFYNKLD---AENAIVH-MGGQWL 180
>UNIPROTKB|E9PBY2 [details] [associations]
symbol:DAZ2 "Deleted in azoospermia protein 2" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 HGNC:HGNC:15964
EMBL:AC006983 EMBL:AC007039 EMBL:AC053490 IPI:IPI00644348
ProteinModelPortal:E9PBY2 SMR:E9PBY2 PRIDE:E9PBY2
Ensembl:ENST00000382440 OMA:DSKIPEF ArrayExpress:E9PBY2 Bgee:E9PBY2
Uniprot:E9PBY2
Length = 654
Score = 115 (45.5 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 37/112 (33%), Positives = 53/112 (47%)
Query: 38 ASNGAPGQG-PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-----PVGK 91
+S+ A QG EG T+FVGG+D + + ++ F +YG + VKI V K
Sbjct: 21 SSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSK 80
Query: 92 GCGFVQFANSLGQIMAINGVGHTMEGKFMMVMGMLFRHQMTQACTLQQLRPM 143
G GFV F N + + I G GK + +G R Q A +Q RP+
Sbjct: 81 GYGFVSFVNDV-DVQKIVGSQIHFHGK-KLKLGPAIRKQKLCARHVQP-RPL 129
>UNIPROTKB|E2RA41 [details] [associations]
symbol:TIAL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0017145 "stem cell division" evidence=IEA]
[GO:0017091 "AU-rich element binding" evidence=IEA] [GO:0010494
"cytoplasmic stress granule" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0007281 "germ
cell development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0000166 GO:GO:0008284 Gene3D:3.30.70.330
GO:GO:0017091 GO:GO:0007281 GO:GO:0010494 GO:GO:0017145
GeneTree:ENSGT00680000099967 KO:K13201 CTD:7073 OMA:EEVYNQS
EMBL:AAEX03015584 EMBL:AAEX03015585 RefSeq:XP_852319.1
ProteinModelPortal:E2RA41 SMR:E2RA41 Ensembl:ENSCAFT00000019370
GeneID:477841 KEGG:cfa:477841 NextBio:20853261 Uniprot:E2RA41
Length = 392
Score = 112 (44.5 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 24/70 (34%), Positives = 40/70 (57%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
++ N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ AI
Sbjct: 215 NQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAI 274
Query: 109 NGV-GHTMEG 117
V G T+EG
Sbjct: 275 VSVNGTTIEG 284
Score = 108 (43.1 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 29/87 (33%), Positives = 46/87 (52%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI----PVGK--GC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ GK G
Sbjct: 98 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 157
Query: 94 GFVQFANSLGQIMAINGVGHTMEGKFM 120
GFV F N L A N + H M G+++
Sbjct: 158 GFVSFYNKLD---AENAIVH-MGGQWL 180
>UNIPROTKB|F2Z5F9 [details] [associations]
symbol:LOC100736782 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00680000099967 KO:K13201 CTD:7073 OMA:EEVYNQS
EMBL:CT826370 EMBL:CT867965 RefSeq:XP_003133244.1 UniGene:Ssc.56271
ProteinModelPortal:F2Z5F9 SMR:F2Z5F9 Ensembl:ENSSSCT00000011686
GeneID:100158186 KEGG:ssc:100158186 Uniprot:F2Z5F9
Length = 392
Score = 112 (44.5 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 24/70 (34%), Positives = 40/70 (57%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
++ N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ AI
Sbjct: 215 NQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAI 274
Query: 109 NGV-GHTMEG 117
V G T+EG
Sbjct: 275 VSVNGTTIEG 284
Score = 108 (43.1 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 29/87 (33%), Positives = 46/87 (52%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI----PVGK--GC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ GK G
Sbjct: 98 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 157
Query: 94 GFVQFANSLGQIMAINGVGHTMEGKFM 120
GFV F N L A N + H M G+++
Sbjct: 158 GFVSFYNKLD---AENAIVH-MGGQWL 180
>MGI|MGI:107913 [details] [associations]
symbol:Tial1 "Tia1 cytotoxic granule-associated RNA binding
protein-like 1" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0008284
"positive regulation of cell proliferation" evidence=IMP]
[GO:0010494 "cytoplasmic stress granule" evidence=IDA] [GO:0017091
"AU-rich element binding" evidence=IDA] [GO:0017145 "stem cell
division" evidence=IMP] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 MGI:MGI:107913
GO:GO:0005634 GO:GO:0006915 GO:GO:0000166 GO:GO:0008284
Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0007281 GO:GO:0010494
eggNOG:COG0724 GO:GO:0017145 HOGENOM:HOG000206748 KO:K13201
HOVERGEN:HBG105006 OrthoDB:EOG4B5P59 CTD:7073 ChiTaRS:TIAL1
EMBL:U55861 IPI:IPI00108085 PIR:S72436 RefSeq:NP_033409.1
UniGene:Mm.242072 ProteinModelPortal:P70318 SMR:P70318
IntAct:P70318 STRING:P70318 PhosphoSite:P70318 PaxDb:P70318
PRIDE:P70318 Ensembl:ENSMUST00000106226 GeneID:21843 KEGG:mmu:21843
InParanoid:P70318 OMA:NGSKQLR NextBio:301310 Bgee:P70318
Genevestigator:P70318 GermOnline:ENSMUSG00000030846 Uniprot:P70318
Length = 392
Score = 112 (44.5 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 24/70 (34%), Positives = 40/70 (57%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
++ N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ AI
Sbjct: 215 NQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAI 274
Query: 109 NGV-GHTMEG 117
V G T+EG
Sbjct: 275 VSVNGTTIEG 284
Score = 108 (43.1 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 29/87 (33%), Positives = 46/87 (52%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI----PVGK--GC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ GK G
Sbjct: 98 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 157
Query: 94 GFVQFANSLGQIMAINGVGHTMEGKFM 120
GFV F N L A N + H M G+++
Sbjct: 158 GFVSFYNKLD---AENAIVH-MGGQWL 180
>RGD|1595845 [details] [associations]
symbol:Tial1 "Tia1 cytotoxic granule-associated RNA binding
protein-like 1" species:10116 "Rattus norvegicus" [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0007281 "germ cell development" evidence=ISO] [GO:0008284
"positive regulation of cell proliferation" evidence=ISO]
[GO:0010494 "cytoplasmic stress granule" evidence=ISO] [GO:0017091
"AU-rich element binding" evidence=ISO] [GO:0017145 "stem cell
division" evidence=ISO] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 RGD:1595845
GO:GO:0005634 GO:GO:0000166 GO:GO:0008284 EMBL:CH473956
Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0007281 GO:GO:0010494
eggNOG:COG0724 GO:GO:0017145 HOGENOM:HOG000206748 KO:K13201
HOVERGEN:HBG105006 OrthoDB:EOG4B5P59 CTD:7073 IPI:IPI00555194
EMBL:BC091409 RefSeq:NP_001013211.1 UniGene:Rn.162475 SMR:Q5BJN3
STRING:Q5BJN3 GeneID:361655 KEGG:rno:361655 UCSC:RGD:1595845
InParanoid:Q5BJN3 NextBio:677112 Genevestigator:Q5BJN3
Uniprot:Q5BJN3
Length = 392
Score = 112 (44.5 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 24/70 (34%), Positives = 40/70 (57%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
++ N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ AI
Sbjct: 215 NQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAI 274
Query: 109 NGV-GHTMEG 117
V G T+EG
Sbjct: 275 VSVNGTTIEG 284
Score = 108 (43.1 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 29/87 (33%), Positives = 46/87 (52%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI----PVGK--GC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ GK G
Sbjct: 98 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 157
Query: 94 GFVQFANSLGQIMAINGVGHTMEGKFM 120
GFV F N L A N + H M G+++
Sbjct: 158 GFVSFYNKLD---AENAIVH-MGGQWL 180
>TAIR|locus:2043157 [details] [associations]
symbol:MAC5B "MOS4-associated complex subunit 5B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR000571
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 PROSITE:PS50103
SMART:SM00356 SMART:SM00360 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0000166 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0003723 EMBL:AC004561 EMBL:AF428354
EMBL:BT002621 IPI:IPI00535091 PIR:A84698 RefSeq:NP_180518.1
UniGene:At.12692 ProteinModelPortal:Q9ZW36 SMR:Q9ZW36 PRIDE:Q9ZW36
EnsemblPlants:AT2G29580.1 GeneID:817507 KEGG:ath:AT2G29580
TAIR:At2g29580 eggNOG:NOG277760 HOGENOM:HOG000171086
InParanoid:Q9ZW36 KO:K12872 OMA:RNRAHIC PhylomeDB:Q9ZW36
ProtClustDB:CLSN2913258 Genevestigator:Q9ZW36 Uniprot:Q9ZW36
Length = 483
Score = 113 (44.8 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 22/56 (39%), Positives = 33/56 (58%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLG 103
+S D S T++VGGL+ V ++D+R F +GEI S++I K C FV + G
Sbjct: 220 ESPEDQSIRTLYVGGLNSRVLEQDIRDQFYAHGEIESIRILAEKACAFVTYTTREG 275
>TAIR|locus:2129590 [details] [associations]
symbol:AT4G14300 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=RCA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 EMBL:CP002687 GO:GO:0000166
Gene3D:3.30.70.330 EMBL:Z97335 EMBL:AL161538 GO:GO:0003676
GO:GO:0030529 eggNOG:COG0724 HOGENOM:HOG000234441 KO:K14411
HSSP:Q61474 EMBL:AJ303457 EMBL:AK226323 IPI:IPI00517003 PIR:G71404
RefSeq:NP_193166.2 UniGene:At.33295 ProteinModelPortal:Q8W034
SMR:Q8W034 IntAct:Q8W034 MINT:MINT-1163850 STRING:Q8W034
PaxDb:O23288 PRIDE:Q8W034 EnsemblPlants:AT4G14300.1 GeneID:827071
KEGG:ath:AT4G14300 TAIR:At4g14300 InParanoid:Q8W034 OMA:YGATNIP
PhylomeDB:Q8W034 ProtClustDB:CLSN2913105 Genevestigator:Q8W034
Uniprot:Q8W034
Length = 411
Score = 112 (44.5 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 30/78 (38%), Positives = 39/78 (50%)
Query: 49 SEGDSSNTT--IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFAN 100
S GD+ N T IFVGGL P +TDE+ RQ F YG + V I +G GFV F +
Sbjct: 101 SGGDAYNKTKKIFVGGLPPTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDS 160
Query: 101 SLGQIMAINGVGHTMEGK 118
++ H + GK
Sbjct: 161 EDAVDSVLHKTFHDLSGK 178
>UNIPROTKB|Q98SJ2 [details] [associations]
symbol:dazap1 "DAZ-associated protein 1" species:8355
"Xenopus laevis" [GO:0003723 "RNA binding" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0007275 GO:GO:0005737 GO:GO:0030154
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0048477 GO:GO:0003723
CTD:26528 HOVERGEN:HBG002295 KO:K14411 EMBL:AY028920
RefSeq:NP_001082088.1 UniGene:Xl.1666 ProteinModelPortal:Q98SJ2
SMR:Q98SJ2 GeneID:398218 KEGG:xla:398218 Xenbase:XB-GENE-864805
Uniprot:Q98SJ2
Length = 360
Score = 111 (44.1 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 30/78 (38%), Positives = 42/78 (53%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFA--N 100
++G +FVGGLD + T E LR FSQYGE+ I K G GFV+F N
Sbjct: 3 NQGGDEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPN 62
Query: 101 SLGQIMAINGVGHTMEGK 118
+G ++A HT++G+
Sbjct: 63 CVGTVLASRP--HTLDGR 78
>UNIPROTKB|C9IZL7 [details] [associations]
symbol:NONO "Non-POU domain-containing octamer-binding
protein" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:AL590762 HGNC:HGNC:7871 HOGENOM:HOG000231095
IPI:IPI00645966 ProteinModelPortal:C9IZL7 SMR:C9IZL7 STRING:C9IZL7
PRIDE:C9IZL7 Ensembl:ENST00000454976 ArrayExpress:C9IZL7
Bgee:C9IZL7 Uniprot:C9IZL7
Length = 207
Score = 106 (42.4 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 23/77 (29%), Positives = 42/77 (54%)
Query: 47 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF-ANSLGQI 105
P + + + +FVG L P++T+E++R+ F +YG+ V I KG GF++ +L +I
Sbjct: 65 PGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEI 124
Query: 106 MAINGVGHTMEGKFMMV 122
+ + GK + V
Sbjct: 125 AKVELDNMPLRGKQLRV 141
>UNIPROTKB|Q800W4 [details] [associations]
symbol:TIA1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
evidence=IEA] [GO:0017091 "AU-rich element binding" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0042036 "negative regulation of cytokine biosynthetic process"
evidence=IEA] [GO:0048024 "regulation of mRNA splicing, via
spliceosome" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0005737 GO:GO:0017148 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0017091 GO:GO:0042036 GO:GO:0048024 eggNOG:COG0724
HSSP:P11940 GeneTree:ENSGT00680000099967 HOGENOM:HOG000206748
KO:K13201 CTD:7072 HOVERGEN:HBG105006 OrthoDB:EOG4B5P59 OMA:TSAPWMG
UniGene:Gga.12064 UniGene:Gga.8269 EMBL:AADN02059907
EMBL:AADN02059908 EMBL:AADN02059909 EMBL:AY189903 IPI:IPI00577572
RefSeq:NP_001244132.1 SMR:Q800W4 STRING:Q800W4
Ensembl:ENSGALT00000022506 GeneID:771327 KEGG:gga:771327
InParanoid:Q800W4 NextBio:20921528 Uniprot:Q800W4
Length = 372
Score = 111 (44.1 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 24/70 (34%), Positives = 41/70 (58%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
++ SN T++ GG+ +T++ +RQ FS +G+I +++ KG FV+F + AI
Sbjct: 196 NQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAI 255
Query: 109 NGV-GHTMEG 117
V G T+EG
Sbjct: 256 VSVNGTTIEG 265
Score = 101 (40.6 bits), Expect = 0.00041, P = 0.00041
Identities = 26/79 (32%), Positives = 39/79 (49%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI----PVGK--GC 93
N A Q + S++ +FVG L P +T ED++ F+ +G I+ ++ GK G
Sbjct: 79 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGY 138
Query: 94 GFVQFANSLGQIMAINGVG 112
GFV F N AI +G
Sbjct: 139 GFVSFFNKWDAENAIQQMG 157
>UNIPROTKB|Q9NQZ3 [details] [associations]
symbol:DAZ1 "Deleted in azoospermia protein 1" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008494 "translation activator activity"
evidence=IDA] [GO:0045948 "positive regulation of translational
initiation" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0007275 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0007283 GO:GO:0003723 GO:GO:0008494 GO:GO:0045948
EMBL:AC006338 EMBL:AF271087 EMBL:AF271088 IPI:IPI00334616
RefSeq:NP_004072.3 UniGene:Hs.522868 UniGene:Hs.70936
ProteinModelPortal:Q9NQZ3 SMR:Q9NQZ3 IntAct:Q9NQZ3 MINT:MINT-254473
STRING:Q9NQZ3 PhosphoSite:Q9NQZ3 DMDM:44887841 PRIDE:Q9NQZ3
Ensembl:ENST00000405239 GeneID:1617 KEGG:hsa:1617 UCSC:uc004fvl.3
CTD:1617 GeneCards:GC0YM025275 HGNC:HGNC:2682 MIM:400003 MIM:415000
neXtProt:NX_Q9NQZ3 Orphanet:1646 PharmGKB:PA27149 eggNOG:KOG0118
HOGENOM:HOG000207950 HOVERGEN:HBG048860 InParanoid:Q9NQZ3
OMA:NYQAYSP GenomeRNAi:1617 NextBio:6642 ArrayExpress:Q9NQZ3
Bgee:Q9NQZ3 CleanEx:HS_DAZ1 Genevestigator:Q9NQZ3
GermOnline:ENSG00000188120 Uniprot:Q9NQZ3
Length = 744
Score = 115 (45.5 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 37/112 (33%), Positives = 53/112 (47%)
Query: 38 ASNGAPGQG-PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-----PVGK 91
+S+ A QG EG T+FVGG+D + + ++ F +YG + VKI V K
Sbjct: 351 SSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSK 410
Query: 92 GCGFVQFANSLGQIMAINGVGHTMEGKFMMVMGMLFRHQMTQACTLQQLRPM 143
G GFV F N + + I G GK + +G R Q A +Q RP+
Sbjct: 411 GYGFVSFVNDV-DVQKIVGSQIHFHGK-KLKLGPAIRKQKLCARHVQP-RPL 459
Score = 115 (45.5 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 37/112 (33%), Positives = 53/112 (47%)
Query: 38 ASNGAPGQG-PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-----PVGK 91
+S+ A QG EG T+FVGG+D + + ++ F +YG + VKI V K
Sbjct: 186 SSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSK 245
Query: 92 GCGFVQFANSLGQIMAINGVGHTMEGKFMMVMGMLFRHQMTQACTLQQLRPM 143
G GFV F N + + I G GK + +G R Q A +Q RP+
Sbjct: 246 GYGFVSFVNDV-DVQKIVGSQIHFHGK-KLKLGPAIRKQKLCARHVQP-RPL 294
Score = 115 (45.5 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 37/112 (33%), Positives = 53/112 (47%)
Query: 38 ASNGAPGQG-PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-----PVGK 91
+S+ A QG EG T+FVGG+D + + ++ F +YG + VKI V K
Sbjct: 21 SSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSK 80
Query: 92 GCGFVQFANSLGQIMAINGVGHTMEGKFMMVMGMLFRHQMTQACTLQQLRPM 143
G GFV F N + + I G GK + +G R Q A +Q RP+
Sbjct: 81 GYGFVSFVNDV-DVQKIVGSQIHFHGK-KLKLGPAIRKQKLCARHVQP-RPL 129
>UNIPROTKB|Q0VBZ6 [details] [associations]
symbol:TIA1 "TIA1 cytotoxic granule-associated RNA binding
protein" species:9913 "Bos taurus" [GO:0048024 "regulation of mRNA
splicing, via spliceosome" evidence=IEA] [GO:0042036 "negative
regulation of cytokine biosynthetic process" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0017091 "AU-rich element binding" evidence=IEA] [GO:0010494
"cytoplasmic stress granule" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0017148
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0042036
GO:GO:0048024 eggNOG:COG0724 GeneTree:ENSGT00680000099967
HOGENOM:HOG000206748 KO:K13201 CTD:7072 HOVERGEN:HBG105006
OrthoDB:EOG4B5P59 OMA:TSAPWMG EMBL:DAAA02031534 EMBL:BC120427
IPI:IPI00707848 RefSeq:NP_001069577.1 UniGene:Bt.91654 SMR:Q0VBZ6
Ensembl:ENSBTAT00000025528 GeneID:538533 KEGG:bta:538533
InParanoid:Q0VBZ6 NextBio:20877426 Uniprot:Q0VBZ6
Length = 384
Score = 111 (44.1 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 24/70 (34%), Positives = 41/70 (58%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
++ SN T++ GG+ +T++ +RQ FS +G+I +++ KG FV+F + AI
Sbjct: 207 NQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAI 266
Query: 109 NGV-GHTMEG 117
V G T+EG
Sbjct: 267 VSVNGTTIEG 276
>UNIPROTKB|F8W8I6 [details] [associations]
symbol:TIA1 "Nucleolysin TIA-1 isoform p40" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC016700
HGNC:HGNC:11802 ChiTaRS:TIA1 IPI:IPI00926358
ProteinModelPortal:F8W8I6 SMR:F8W8I6 PRIDE:F8W8I6
Ensembl:ENST00000282574 ArrayExpress:F8W8I6 Bgee:F8W8I6
Uniprot:F8W8I6
Length = 385
Score = 111 (44.1 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 24/70 (34%), Positives = 41/70 (58%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
++ SN T++ GG+ +T++ +RQ FS +G+I +++ KG FV+F + AI
Sbjct: 207 NQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAI 266
Query: 109 NGV-GHTMEG 117
V G T+EG
Sbjct: 267 VSVNGTTIEG 276
>UNIPROTKB|D6RBQ9 [details] [associations]
symbol:HNRNPD "Heterogeneous nuclear ribonucleoprotein D0"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
HOGENOM:HOG000234441 EMBL:AC124016 HGNC:HGNC:5036 ChiTaRS:HNRNPD
InterPro:IPR012956 Pfam:PF08143 IPI:IPI00963980
ProteinModelPortal:D6RBQ9 SMR:D6RBQ9 Ensembl:ENST00000503822
ArrayExpress:D6RBQ9 Bgee:D6RBQ9 Uniprot:D6RBQ9
Length = 155
Score = 103 (41.3 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 34/115 (29%), Positives = 52/115 (45%)
Query: 18 AATPRKXXXXXXXXXXXXXXASNGAPGQGPQSEG---DSSNTT-----IFVGGLDPNVTD 69
AAT AS G G +SEG D+S +F+GGL + T
Sbjct: 32 AATQGAAAAAGSGAGTGGGTASGGTEGGSAESEGAKIDASKNEEDEGKMFIGGLSWDTTK 91
Query: 70 EDLRQPFSQYGEIA--SVKI-PV---GKGCGFVQFANSLGQIMAINGVGHTMEGK 118
+DL+ FS++GE+ ++K+ P+ +G GFV F S ++ H + GK
Sbjct: 92 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGK 146
>UNIPROTKB|Q83D11 [details] [associations]
symbol:CBU_0935 "RNA binding protein" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:AE016828 GenomeReviews:AE016828_GR HSSP:Q9V535
RefSeq:NP_819948.1 ProteinModelPortal:Q83D11 GeneID:1208828
KEGG:cbu:CBU_0935 PATRIC:17930577 HOGENOM:HOG000026939 OMA:QVHSANI
ProtClustDB:CLSK914425 BioCyc:CBUR227377:GJ7S-926-MONOMER
Uniprot:Q83D11
Length = 129
Score = 103 (41.3 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 31/90 (34%), Positives = 46/90 (51%)
Query: 44 GQGPQSEGDSS-----NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP----VG--KG 92
G+G DSS N I+VG L +V + DL Q FS++G I SVKI G KG
Sbjct: 27 GRGKDRLDDSSWKSDNNDQIYVGNLPYHVVENDLHQYFSRFGAIESVKIVRNFRTGRSKG 86
Query: 93 CGFVQFANSLGQIMAINGVGHTMEGKFMMV 122
FV + + A++ G ++G+ ++V
Sbjct: 87 YAFVTYVTPKQAVKALDAHGKDLQGRSLVV 116
>TIGR_CMR|CBU_0935 [details] [associations]
symbol:CBU_0935 "RNA-binding protein" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] [GO:0003723 "RNA binding" evidence=ISS]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:AE016828 GenomeReviews:AE016828_GR HSSP:Q9V535
RefSeq:NP_819948.1 ProteinModelPortal:Q83D11 GeneID:1208828
KEGG:cbu:CBU_0935 PATRIC:17930577 HOGENOM:HOG000026939 OMA:QVHSANI
ProtClustDB:CLSK914425 BioCyc:CBUR227377:GJ7S-926-MONOMER
Uniprot:Q83D11
Length = 129
Score = 103 (41.3 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 31/90 (34%), Positives = 46/90 (51%)
Query: 44 GQGPQSEGDSS-----NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP----VG--KG 92
G+G DSS N I+VG L +V + DL Q FS++G I SVKI G KG
Sbjct: 27 GRGKDRLDDSSWKSDNNDQIYVGNLPYHVVENDLHQYFSRFGAIESVKIVRNFRTGRSKG 86
Query: 93 CGFVQFANSLGQIMAINGVGHTMEGKFMMV 122
FV + + A++ G ++G+ ++V
Sbjct: 87 YAFVTYVTPKQAVKALDAHGKDLQGRSLVV 116
>UNIPROTKB|P31483 [details] [associations]
symbol:TIA1 "Nucleolysin TIA-1 isoform p40" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0010494
"cytoplasmic stress granule" evidence=IEA] [GO:0017091 "AU-rich
element binding" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IEA] [GO:0042036 "negative regulation of
cytokine biosynthetic process" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0048024 "regulation of mRNA splicing, via spliceosome"
evidence=IDA] [GO:0006917 "induction of apoptosis" evidence=TAS]
[GO:0008143 "poly(A) RNA binding" evidence=TAS] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0005737 GO:GO:0006915 EMBL:CH471053
GO:GO:0006917 GO:GO:0017148 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0017091 GO:GO:0042036 GO:GO:0048024 eggNOG:COG0724
GO:GO:0008143 HOGENOM:HOG000206748 KO:K13201 EMBL:M77142
EMBL:S70114 EMBL:AC016700 IPI:IPI00291398 IPI:IPI00333996
PIR:A39293 RefSeq:NP_071320.2 RefSeq:NP_071505.2 UniGene:Hs.413123
PDB:3BS9 PDBsum:3BS9 ProteinModelPortal:P31483 SMR:P31483
IntAct:P31483 STRING:P31483 PhosphoSite:P31483 DMDM:206729905
PaxDb:P31483 PRIDE:P31483 Ensembl:ENST00000415783
Ensembl:ENST00000433529 GeneID:7072 KEGG:hsa:7072 UCSC:uc002sgj.4
UCSC:uc002sgk.4 CTD:7072 GeneCards:GC02M070437 HGNC:HGNC:11802
MIM:603518 neXtProt:NX_P31483 PharmGKB:PA36511 HOVERGEN:HBG105006
InParanoid:P31483 OrthoDB:EOG4B5P59 PhylomeDB:P31483 ChiTaRS:TIA1
EvolutionaryTrace:P31483 GenomeRNAi:7072 NextBio:27655
ArrayExpress:P31483 Bgee:P31483 CleanEx:HS_TIA1
Genevestigator:P31483 GermOnline:ENSG00000116001 Uniprot:P31483
Length = 386
Score = 111 (44.1 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 24/70 (34%), Positives = 41/70 (58%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
++ SN T++ GG+ +T++ +RQ FS +G+I +++ KG FV+F + AI
Sbjct: 207 NQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAI 266
Query: 109 NGV-GHTMEG 117
V G T+EG
Sbjct: 267 VSVNGTTIEG 276
>UNIPROTKB|F1PWU8 [details] [associations]
symbol:TIA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00680000099967 OMA:TSAPWMG EMBL:AAEX03007635
EMBL:AAEX03007634 Ensembl:ENSCAFT00000005363 Uniprot:F1PWU8
Length = 393
Score = 111 (44.1 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 24/70 (34%), Positives = 41/70 (58%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
++ SN T++ GG+ +T++ +RQ FS +G+I +++ KG FV+F + AI
Sbjct: 207 NQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAI 266
Query: 109 NGV-GHTMEG 117
V G T+EG
Sbjct: 267 VSVNGTTIEG 276
>UNIPROTKB|O57437 [details] [associations]
symbol:dazl-a "Deleted in azoospermia-like-A" species:8355
"Xenopus laevis" [GO:0003723 "RNA binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007281 "germ cell development" evidence=IMP]
[GO:0008354 "germ cell migration" evidence=IMP] [GO:0008494
"translation activator activity" evidence=IDA] [GO:0032019
"mitochondrial cloud" evidence=IDA] [GO:0045495 "pole plasm"
evidence=IDA] [GO:0045948 "positive regulation of translational
initiation" evidence=IDA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0007275
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0048477 GO:GO:0007283
GO:GO:0003723 GO:GO:0008494 GO:GO:0007281 GO:GO:0045948
GO:GO:0045495 GO:GO:0008354 EMBL:AF017778 RefSeq:NP_001081772.1
UniGene:Xl.311 HSSP:Q15427 ProteinModelPortal:O57437 GeneID:398041
KEGG:xla:398041 CTD:1618 Xenbase:XB-GENE-6078612 HOVERGEN:HBG000573
GO:GO:0032019 Uniprot:O57437
Length = 286
Score = 108 (43.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 35/115 (30%), Positives = 57/115 (49%)
Query: 38 ASNGAPGQG-PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-----PVGK 91
A A QG EG+ T+FVGG+D + + ++R F+++G + VKI V K
Sbjct: 14 AEEEAVNQGFVLPEGEIMPNTVFVGGIDITMDEIEIRDFFTRFGNVKEVKIITDRTGVSK 73
Query: 92 GCGFVQFANSLGQIMAINGVGHTMEGKFMMVMGMLFRHQMTQACTLQQLRPMGLT 146
G GF+ F++ + + I + GK + +G R + CT Q RP+ L+
Sbjct: 74 GYGFISFSDEV-DVQKIVKSQISFHGK-KLKLGPAIR----KICTYVQPRPVVLS 122
>FB|FBgn0005649 [details] [associations]
symbol:Rox8 "Rox8" species:7227 "Drosophila melanogaster"
[GO:0008143 "poly(A) RNA binding" evidence=NAS] [GO:0003729 "mRNA
binding" evidence=ISS;NAS] [GO:0005685 "U1 snRNP" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IC]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=IMP] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 EMBL:AE014297
GO:GO:0000166 GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0000398
GO:GO:0000381 HSSP:P11940 GO:GO:0005685
GeneTree:ENSGT00680000099967 KO:K13201 OMA:EEVYNQS
FlyBase:FBgn0005649 EMBL:BT050464 RefSeq:NP_732945.1
UniGene:Dm.6352 SMR:Q8IMX4 IntAct:Q8IMX4 MINT:MINT-303158
STRING:Q8IMX4 EnsemblMetazoa:FBtr0084591 EnsemblMetazoa:FBtr0333200
EnsemblMetazoa:FBtr0333201 EnsemblMetazoa:FBtr0333202 GeneID:42848
KEGG:dme:Dmel_CG5422 UCSC:CG5422-RD CTD:42848 InParanoid:Q8IMX4
GenomeRNAi:42848 NextBio:830893 Uniprot:Q8IMX4
Length = 470
Score = 111 (44.1 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 35/125 (28%), Positives = 55/125 (44%)
Query: 4 MNGVYCSSRPMRIGAAT-----PRKXXXXXXXXXXXXXXASNGAPGQGPQ--------SE 50
MNG + SR +R +T PR+ NG+ +G Q ++
Sbjct: 156 MNGQWIGSRSIRTNWSTRKLPPPREPSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQ 215
Query: 51 GDSSNTTIFVGGLDPNVTDEDL-RQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAIN 109
+NTT++ GG PNV +DL + F Q+G I V++ KG F++F A +
Sbjct: 216 SSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKDKGFSFIKFVTKEA---AAH 272
Query: 110 GVGHT 114
+ HT
Sbjct: 273 AIEHT 277
Score = 105 (42.0 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 30/78 (38%), Positives = 44/78 (56%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---P---VGKGCGF 95
+PG P+++ SS+ IFVG L P + E LR+ F+ +GEI++ +I P KG F
Sbjct: 82 SPGNQPKTD-ISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAF 140
Query: 96 VQF---ANSLGQIMAING 110
V F A + I A+NG
Sbjct: 141 VSFVKKAEAENAIQAMNG 158
>RGD|1305280 [details] [associations]
symbol:Dazap1 "DAZ associated protein 1" species:10116 "Rattus
norvegicus" [GO:0001893 "maternal placenta development"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0007283 "spermatogenesis"
evidence=ISO] [GO:0008283 "cell proliferation" evidence=ISO]
[GO:0035613 "RNA stem-loop binding" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0005844 "polysome" evidence=ISO]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 RGD:1305280 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 EMBL:CH474029 eggNOG:COG0724
CTD:26528 HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411
OrthoDB:EOG40ZQXT OMA:GGYDMYN IPI:IPI00365961 EMBL:BC098930
RefSeq:NP_001020913.1 UniGene:Rn.16769 SMR:Q4KLZ3 GeneID:362836
KEGG:rno:362836 UCSC:RGD:1305280 InParanoid:Q4KLZ3 NextBio:681451
Genevestigator:Q4KLZ3 Uniprot:Q4KLZ3
Length = 405
Score = 110 (43.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 31/78 (39%), Positives = 41/78 (52%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFA--N 100
S G +FVGGLD + T E LR FSQYGE+ I K G GFV+F N
Sbjct: 3 SAGADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPN 62
Query: 101 SLGQIMAINGVGHTMEGK 118
+G ++A HT++G+
Sbjct: 63 CVGTVLASRP--HTLDGR 78
>MGI|MGI:1917498 [details] [associations]
symbol:Dazap1 "DAZ associated protein 1" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0001893 "maternal placenta development" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=ISA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005844 "polysome"
evidence=IDA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0035613 "RNA stem-loop binding"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 MGI:MGI:1917498 GO:GO:0007275
GO:GO:0005634 GO:GO:0005737 GO:GO:0030154 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0007283 GO:GO:0003723 eggNOG:COG0724
CTD:26528 HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411
ChiTaRS:DAZAP1 EMBL:AF225910 EMBL:BC049355 IPI:IPI00406492
IPI:IPI00406493 RefSeq:NP_001116076.1 RefSeq:NP_001116077.1
RefSeq:NP_573451.2 UniGene:Mm.148693 ProteinModelPortal:Q9JII5
SMR:Q9JII5 STRING:Q9JII5 PhosphoSite:Q9JII5
REPRODUCTION-2DPAGE:Q9JII5 PaxDb:Q9JII5 PRIDE:Q9JII5
Ensembl:ENSMUST00000092305 Ensembl:ENSMUST00000105362 GeneID:70248
KEGG:mmu:70248 UCSC:uc007gcl.2 UCSC:uc007gcm.2
GeneTree:ENSGT00700000104255 InParanoid:Q9JII5 NextBio:331250
Bgee:Q9JII5 CleanEx:MM_DAZAP1 Genevestigator:Q9JII5
GermOnline:ENSMUSG00000069565 Uniprot:Q9JII5
Length = 406
Score = 110 (43.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 31/78 (39%), Positives = 41/78 (52%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFA--N 100
S G +FVGGLD + T E LR FSQYGE+ I K G GFV+F N
Sbjct: 3 SAGADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPN 62
Query: 101 SLGQIMAINGVGHTMEGK 118
+G ++A HT++G+
Sbjct: 63 CVGTVLASRP--HTLDGR 78
>UNIPROTKB|F2Z3S1 [details] [associations]
symbol:Dazap1 "Protein Dazap1" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:1305280 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104255 IPI:IPI00365961
ProteinModelPortal:F2Z3S1 SMR:F2Z3S1 PRIDE:F2Z3S1
Ensembl:ENSRNOT00000046886 Uniprot:F2Z3S1
Length = 406
Score = 110 (43.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 31/78 (39%), Positives = 41/78 (52%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFA--N 100
S G +FVGGLD + T E LR FSQYGE+ I K G GFV+F N
Sbjct: 3 SAGADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPN 62
Query: 101 SLGQIMAINGVGHTMEGK 118
+G ++A HT++G+
Sbjct: 63 CVGTVLASRP--HTLDGR 78
>WB|WBGene00011722 [details] [associations]
symbol:T11G6.8 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0042127 "regulation of
cell proliferation" evidence=IMP] [GO:0040020 "regulation of
meiosis" evidence=IMP] [GO:0007281 "germ cell development"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR000504 InterPro:IPR000571 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 PROSITE:PS50103 SMART:SM00356
SMART:SM00360 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0002119 GO:GO:0000166 GO:GO:0046872 GO:GO:0018996
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0040011 GO:GO:0003723
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
eggNOG:NOG277760 HOGENOM:HOG000171086 KO:K12872
GeneTree:ENSGT00390000002792 EMBL:Z69384 PIR:T24851
RefSeq:NP_502014.2 ProteinModelPortal:Q22412 SMR:Q22412
STRING:Q22412 PaxDb:Q22412 EnsemblMetazoa:T11G6.8.1
EnsemblMetazoa:T11G6.8.2 GeneID:177979 KEGG:cel:CELE_T11G6.8
UCSC:T11G6.8.1 CTD:177979 WormBase:T11G6.8 InParanoid:Q22412
OMA:CAFVQYT NextBio:899214 Uniprot:Q22412
Length = 408
Score = 110 (43.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 23/61 (37%), Positives = 38/61 (62%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPN----VTDEDLRQPFSQYGEIASVKIPVGKGCGFVQ 97
AP P + D++ TT+++G L P+ VT++DL F QYG+I +++ KGC F++
Sbjct: 223 APTLSPPA--DTTITTLYIGNLGPSGAQQVTEKDLNDFFYQYGDIRCLRVLTEKGCAFIE 280
Query: 98 F 98
F
Sbjct: 281 F 281
>UNIPROTKB|E7EW00 [details] [associations]
symbol:U2SURP "U2 snRNP-associated SURP motif-containing
protein" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:AC018450 EMBL:AC026304 HGNC:HGNC:30855
ChiTaRS:u2surp IPI:IPI00979562 ProteinModelPortal:E7EW00 SMR:E7EW00
Ensembl:ENST00000488497 UCSC:uc011bnj.1 ArrayExpress:E7EW00
Bgee:E7EW00 Uniprot:E7EW00
Length = 425
Score = 110 (43.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 31/92 (33%), Positives = 45/92 (48%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI--PVG-------KG 92
APG GD S T +++G ++P + +E L Q F ++G +ASVKI P +
Sbjct: 262 APGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERN 319
Query: 93 CGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
CGFV F N A+ + M F M +G
Sbjct: 320 CGFVAFMNRRDAERALKNLNGKMIMSFEMKLG 351
>UNIPROTKB|C9JYS8 [details] [associations]
symbol:NONO "Non-POU domain-containing octamer-binding
protein" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 InterPro:IPR012975 Pfam:PF08075 EMBL:AL590762
HGNC:HGNC:7871 HOGENOM:HOG000231095 IPI:IPI00645010
ProteinModelPortal:C9JYS8 SMR:C9JYS8 STRING:C9JYS8 PRIDE:C9JYS8
Ensembl:ENST00000413858 ArrayExpress:C9JYS8 Bgee:C9JYS8
Uniprot:C9JYS8
Length = 248
Score = 106 (42.4 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 23/77 (29%), Positives = 42/77 (54%)
Query: 47 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF-ANSLGQI 105
P + + + +FVG L P++T+E++R+ F +YG+ V I KG GF++ +L +I
Sbjct: 65 PGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEI 124
Query: 106 MAINGVGHTMEGKFMMV 122
+ + GK + V
Sbjct: 125 AKVELDNMPLRGKQLRV 141
>MGI|MGI:1922638 [details] [associations]
symbol:Boll "bol, boule-like (Drosophila)" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0007126
"meiosis" evidence=ISO] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0008494 "translation activator activity"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0045948 "positive regulation of translational initiation"
evidence=ISO] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 MGI:MGI:1922638 GO:GO:0007275
GO:GO:0005737 GO:GO:0030154 GO:GO:0006417 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0007283 GO:GO:0003723 CTD:66037
eggNOG:NOG260394 HOGENOM:HOG000095250 HOVERGEN:HBG048761
OrthoDB:EOG4MPHQQ EMBL:AF272859 EMBL:AK016125 EMBL:BY103870
IPI:IPI00403643 IPI:IPI00886395 RefSeq:NP_001106838.1
RefSeq:NP_083543.2 UniGene:Mm.483408 ProteinModelPortal:Q924M5
SMR:Q924M5 STRING:Q924M5 PhosphoSite:Q924M5 PRIDE:Q924M5
DNASU:75388 Ensembl:ENSMUST00000159398 GeneID:75388 KEGG:mmu:75388
UCSC:uc007bal.1 UCSC:uc007bam.1 GeneTree:ENSGT00530000063480
InParanoid:Q924M5 NextBio:342892 Bgee:Q924M5 CleanEx:MM_BOLL
Genevestigator:Q924M5 GermOnline:ENSMUSG00000025977 Uniprot:Q924M5
Length = 281
Score = 107 (42.7 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 27/61 (44%), Positives = 33/61 (54%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQ 97
P GP+ G IFVGG+D + DLR+ FSQYG + VKI V KG GF+
Sbjct: 21 PTSGPRY-GTVIPNRIFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFIT 79
Query: 98 F 98
F
Sbjct: 80 F 80
>UNIPROTKB|H0Y8D9 [details] [associations]
symbol:U2SURP "U2 snRNP-associated SURP motif-containing
protein" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:AC018450 EMBL:AC026304 HGNC:HGNC:30855
ChiTaRS:u2surp Ensembl:ENST00000463563 Bgee:H0Y8D9 Uniprot:H0Y8D9
Length = 439
Score = 110 (43.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 31/92 (33%), Positives = 45/92 (48%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI--PVG-------KG 92
APG GD S T +++G ++P + +E L Q F ++G +ASVKI P +
Sbjct: 264 APGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERN 321
Query: 93 CGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
CGFV F N A+ + M F M +G
Sbjct: 322 CGFVAFMNRRDAERALKNLNGKMIMSFEMKLG 353
>ZFIN|ZDB-GENE-030131-1506 [details] [associations]
symbol:tia1 "cytotoxic granule-associated RNA
binding protein 1" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 ZFIN:ZDB-GENE-030131-1506 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:COG0724 HSSP:P11940
GeneTree:ENSGT00680000099967 HOGENOM:HOG000206748 KO:K13201
CTD:7072 HOVERGEN:HBG105006 OrthoDB:EOG4B5P59 OMA:WAVEPGQ
EMBL:CT027545 EMBL:AL928954 EMBL:BC045368 IPI:IPI00511851
RefSeq:NP_997793.1 UniGene:Dr.159520 SMR:Q7ZVY0
Ensembl:ENSDART00000074400 GeneID:793165 KEGG:dre:793165
InParanoid:Q7ZVY0 NextBio:20931339 Uniprot:Q7ZVY0
Length = 386
Score = 109 (43.4 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 24/70 (34%), Positives = 41/70 (58%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
++ SN T++ GG+ +T++ +RQ FS +G+I V++ KG FV+F + AI
Sbjct: 197 NQSSPSNCTVYCGGVTTGLTEQLMRQTFSPFGQIMEVRVFPDKGYSFVRFNSHESAAHAI 256
Query: 109 NGV-GHTMEG 117
V G ++EG
Sbjct: 257 VSVNGTSLEG 266
Score = 103 (41.3 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 26/79 (32%), Positives = 39/79 (49%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI----PVGK--GC 93
N A Q + S++ +FVG L P +T +D+R F+ +G I+ ++ GK G
Sbjct: 80 NWATSPSSQKKDTSNHFHVFVGDLSPEITTDDIRAAFAPFGRISDARVVKDMATGKSKGY 139
Query: 94 GFVQFANSLGQIMAINGVG 112
GFV F N AI +G
Sbjct: 140 GFVSFFNKWDAENAIQQMG 158
>RGD|1559527 [details] [associations]
symbol:Boll "bol, boule-like (Drosophila)" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0007126 "meiosis"
evidence=IEA;ISO] [GO:0008494 "translation activator activity"
evidence=IEA;ISO] [GO:0045948 "positive regulation of translational
initiation" evidence=IEA;ISO] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 RGD:1559527
GO:GO:0007126 GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0008494 CTD:66037 OrthoDB:EOG4MPHQQ GO:GO:0045948
GeneTree:ENSGT00530000063480 EMBL:CH473965 EMBL:AC103419
EMBL:AC122091 IPI:IPI00884580 RefSeq:NP_001106841.1
RefSeq:XP_003750748.1 UniGene:Rn.145717 Ensembl:ENSRNOT00000021299
GeneID:100911373 GeneID:501143 KEGG:rno:100911373 KEGG:rno:501143
UCSC:RGD:1559527 NextBio:708414 Uniprot:D4ACT7
Length = 293
Score = 107 (42.7 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 27/61 (44%), Positives = 33/61 (54%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQ 97
P GP+ G IFVGG+D + DLR+ FSQYG + VKI V KG GF+
Sbjct: 33 PTSGPRY-GTVIPNRIFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFIT 91
Query: 98 F 98
F
Sbjct: 92 F 92
>ZFIN|ZDB-GENE-040426-2717 [details] [associations]
symbol:hnrpdl "heterogeneous nuclear
ribonucleoprotein D-like" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-040426-2717
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529
eggNOG:COG0724 HOGENOM:HOG000234441 HOVERGEN:HBG002295 HSSP:Q14103
CTD:9987 GeneTree:ENSGT00700000104347 KO:K13044 OMA:QHPPADN
OrthoDB:EOG49W2FZ EMBL:CR847788 EMBL:BC055525 IPI:IPI00500216
RefSeq:NP_998557.1 UniGene:Dr.75234 SMR:Q7SXN2 STRING:Q7SXN2
Ensembl:ENSDART00000020631 GeneID:406701 KEGG:dre:406701
InParanoid:Q7SXN2 NextBio:20818224 Uniprot:Q7SXN2
Length = 296
Score = 107 (42.7 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 24/63 (38%), Positives = 35/63 (55%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFV 96
P + +G +FVGGL P++T+E LR+ F YGEI S+++P +G FV
Sbjct: 102 PKRAKAIKGKEPPKKVFVGGLSPDITEEQLREYFGVYGEIESIELPTDTKTNERRGFCFV 161
Query: 97 QFA 99
FA
Sbjct: 162 TFA 164
>UNIPROTKB|E1BAK6 [details] [associations]
symbol:DAZAP1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 OMA:HNLDGRN GeneTree:ENSGT00700000104255
EMBL:DAAA02020260 IPI:IPI00701555 Ensembl:ENSBTAT00000026274
Uniprot:E1BAK6
Length = 396
Score = 109 (43.4 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 29/69 (42%), Positives = 39/69 (56%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFA--NSLGQIMAIN 109
+FVGGLD + T E LR FSQYGE+ I K G GFV+F N +G ++A
Sbjct: 2 LFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASR 61
Query: 110 GVGHTMEGK 118
HT++G+
Sbjct: 62 P--HTLDGR 68
>UNIPROTKB|F1NTG9 [details] [associations]
symbol:DAZAP1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 OMA:HNLDGRN
GeneTree:ENSGT00700000104255 EMBL:AADN02058490 IPI:IPI00577519
Ensembl:ENSGALT00000024525 ArrayExpress:F1NTG9 Uniprot:F1NTG9
Length = 398
Score = 109 (43.4 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 29/69 (42%), Positives = 39/69 (56%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFA--NSLGQIMAIN 109
+FVGGLD + T E LR FSQYGE+ I K G GFV+F N +G ++A
Sbjct: 2 LFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASR 61
Query: 110 GVGHTMEGK 118
HT++G+
Sbjct: 62 P--HTLDGR 68
>UNIPROTKB|I3LB68 [details] [associations]
symbol:DAZAP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 CTD:26528 KO:K14411 OMA:HNLDGRN
GeneTree:ENSGT00700000104255 EMBL:FP325262 RefSeq:NP_001231435.1
UniGene:Ssc.1299 Ensembl:ENSSSCT00000023438 GeneID:100625005
KEGG:ssc:100625005 Uniprot:I3LB68
Length = 406
Score = 109 (43.4 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 29/69 (42%), Positives = 39/69 (56%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFA--NSLGQIMAIN 109
+FVGGLD + T E LR FSQYGE+ I K G GFV+F N +G ++A
Sbjct: 12 LFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASR 71
Query: 110 GVGHTMEGK 118
HT++G+
Sbjct: 72 P--HTLDGR 78
>UNIPROTKB|E2R6E4 [details] [associations]
symbol:DAZAP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 CTD:26528 KO:K14411 OMA:HNLDGRN
GeneTree:ENSGT00700000104255 EMBL:AAEX03012650 EMBL:AAEX03012651
RefSeq:XP_003432858.1 Ensembl:ENSCAFT00000031038 GeneID:100683271
KEGG:cfa:100683271 Uniprot:E2R6E4
Length = 407
Score = 109 (43.4 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 29/69 (42%), Positives = 39/69 (56%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFA--NSLGQIMAIN 109
+FVGGLD + T E LR FSQYGE+ I K G GFV+F N +G ++A
Sbjct: 12 LFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASR 71
Query: 110 GVGHTMEGK 118
HT++G+
Sbjct: 72 P--HTLDGR 78
>UNIPROTKB|Q96EP5 [details] [associations]
symbol:DAZAP1 "DAZ-associated protein 1" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0007275 GO:GO:0005634 GO:GO:0005737
GO:GO:0030154 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0007283
GO:GO:0003723 eggNOG:COG0724 EMBL:AF181719 EMBL:BC012062
EMBL:AK056850 IPI:IPI00165230 IPI:IPI00335930 RefSeq:NP_061832.2
RefSeq:NP_733829.1 UniGene:Hs.222510 PDB:2DGS PDB:2DH8 PDBsum:2DGS
PDBsum:2DH8 ProteinModelPortal:Q96EP5 SMR:Q96EP5 IntAct:Q96EP5
STRING:Q96EP5 PhosphoSite:Q96EP5 DMDM:44887869
REPRODUCTION-2DPAGE:IPI00165230 PaxDb:Q96EP5 PRIDE:Q96EP5
DNASU:26528 Ensembl:ENST00000233078 Ensembl:ENST00000336761
GeneID:26528 KEGG:hsa:26528 UCSC:uc002lsm.3 UCSC:uc002lsn.3
CTD:26528 GeneCards:GC19P001407 HGNC:HGNC:2683 HPA:HPA004201
HPA:HPA004631 MIM:607430 neXtProt:NX_Q96EP5 PharmGKB:PA27153
HOGENOM:HOG000234441 HOVERGEN:HBG002295 InParanoid:Q96EP5 KO:K14411
OMA:HNLDGRN OrthoDB:EOG40ZQXT PhylomeDB:Q96EP5 ChiTaRS:DAZAP1
EvolutionaryTrace:Q96EP5 GenomeRNAi:26528 NextBio:48864
ArrayExpress:Q96EP5 Bgee:Q96EP5 CleanEx:HS_DAZAP1
Genevestigator:Q96EP5 GermOnline:ENSG00000071626 Uniprot:Q96EP5
Length = 407
Score = 109 (43.4 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 29/69 (42%), Positives = 39/69 (56%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFA--NSLGQIMAIN 109
+FVGGLD + T E LR FSQYGE+ I K G GFV+F N +G ++A
Sbjct: 12 LFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASR 71
Query: 110 GVGHTMEGK 118
HT++G+
Sbjct: 72 P--HTLDGR 78
>UNIPROTKB|Q4V7Y4 [details] [associations]
symbol:dazl-b "Deleted in azoospermia-like-B" species:8355
"Xenopus laevis" [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0007281 "germ cell
development" evidence=ISS] [GO:0008354 "germ cell migration"
evidence=ISS] [GO:0008494 "translation activator activity"
evidence=ISS] [GO:0032019 "mitochondrial cloud" evidence=ISS]
[GO:0045948 "positive regulation of translational initiation"
evidence=ISS] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0007275 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0048477 GO:GO:0007283 GO:GO:0003723
GO:GO:0008494 GO:GO:0007281 GO:GO:0045948 GO:GO:0008354
UniGene:Xl.311 HSSP:Q15427 Xenbase:XB-GENE-6078612
HOVERGEN:HBG000573 GO:GO:0032019 EMBL:BC071023 EMBL:BC097658
ProteinModelPortal:Q4V7Y4 Uniprot:Q4V7Y4
Length = 286
Score = 106 (42.4 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 36/115 (31%), Positives = 56/115 (48%)
Query: 38 ASNGAPGQG-PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-----PVGK 91
A A QG EG T+FVGG+D + + ++R F+++G + VKI V K
Sbjct: 14 AEEEAVNQGFVLPEGKIMPNTVFVGGIDITMDEIEIRDFFTRFGNVKEVKIITDRTGVSK 73
Query: 92 GCGFVQFANSLGQIMAINGVGHTMEGKFMMVMGMLFRHQMTQACTLQQLRPMGLT 146
G GF+ F++ + I I + GK + +G R + CT Q RP+ L+
Sbjct: 74 GYGFISFSDEV-DIQKIVKSQISFHGK-KLKLGPAIR----KICTYVQPRPVVLS 122
>UNIPROTKB|D4A288 [details] [associations]
symbol:D4A288 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 OrthoDB:EOG469QV2
IPI:IPI00358787 ProteinModelPortal:D4A288
Ensembl:ENSRNOT00000039637 Uniprot:D4A288
Length = 291
Score = 106 (42.4 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 26/66 (39%), Positives = 35/66 (53%)
Query: 40 NGAPGQGPQSEGDS-SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------G 92
NGAP S D S T +++ GL P++TD+DL + YG+I S K + K G
Sbjct: 8 NGAPNSSRSSGNDQMSKTNLYIRGLQPSITDQDLVKLCQPYGKIVSTKAILDKTTNKCKG 67
Query: 93 CGFVQF 98
GFV F
Sbjct: 68 YGFVDF 73
>ZFIN|ZDB-GENE-040426-1547 [details] [associations]
symbol:tial1 "TIA1 cytotoxic granule-associated
RNA binding protein-like 1" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-040426-1547 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 GeneTree:ENSGT00680000099967 EMBL:BX530079
IPI:IPI00920337 ProteinModelPortal:E9QJJ0
Ensembl:ENSDART00000135321 ArrayExpress:E9QJJ0 Bgee:E9QJJ0
Uniprot:E9QJJ0
Length = 389
Score = 108 (43.1 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 22/70 (31%), Positives = 40/70 (57%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
++ N T++ GG+ +T+ +RQ FS +G+I +++ KG F++F++ AI
Sbjct: 216 NQSSPQNCTVYCGGIQSGLTEHLMRQTFSPFGQIMEIRVFPEKGYSFIRFSSHESAAHAI 275
Query: 109 NGV-GHTMEG 117
V G T+EG
Sbjct: 276 VSVNGTTIEG 285
Score = 107 (42.7 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 29/87 (33%), Positives = 46/87 (52%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI----PVGK--GC 93
N A Q + S++ +FVG L P +T +D+R F+ +G+I+ ++ GK G
Sbjct: 99 NWATTPSSQKKDTSNHFHVFVGDLSPEITTDDIRAAFAPFGKISDARVVKDMTTGKSKGY 158
Query: 94 GFVQFANSLGQIMAINGVGHTMEGKFM 120
GFV F N L A N + H M G+++
Sbjct: 159 GFVSFYNKLD---AENAIVH-MGGQWL 181
>TAIR|locus:2077427 [details] [associations]
symbol:AT3G08000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC013483 eggNOG:COG0724
HOGENOM:HOG000276232 HSSP:Q14103 UniGene:At.40270 UniGene:At.28103
EMBL:BT012118 EMBL:BT012373 IPI:IPI00520412 RefSeq:NP_187457.1
ProteinModelPortal:Q9SFB4 SMR:Q9SFB4 EnsemblPlants:AT3G08000.1
GeneID:819991 KEGG:ath:AT3G08000 TAIR:At3g08000 InParanoid:Q9SFB4
OMA:FCTSSSA PhylomeDB:Q9SFB4 ProtClustDB:CLSN2915579
Genevestigator:Q9SFB4 Uniprot:Q9SFB4
Length = 143
Score = 100 (40.3 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 26/79 (32%), Positives = 42/79 (53%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG------FVQFANSL 102
S S ++ +F+GGL +V ++ L+ FS +GE+A V+I KG G FV FA
Sbjct: 34 SSSASPSSKLFIGGLSWSVDEQSLKDAFSSFGEVAEVRIAYDKGSGRSRGFGFVDFAEE- 92
Query: 103 GQIMAINGVGHTMEGKFMM 121
G ++ M+GK ++
Sbjct: 93 GDALSAKDA---MDGKGLL 108
>TAIR|locus:2087457 [details] [associations]
symbol:AT3G14100 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003730 "mRNA 3'-UTR binding"
evidence=ISS] [GO:0005829 "cytosol" evidence=RCA] [GO:0006007
"glucose catabolic process" evidence=RCA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:CP002686 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:AP000600 HSSP:P33240 KO:K13201 OMA:WAVEPGQ EMBL:AY139775
EMBL:BT004540 IPI:IPI00517194 RefSeq:NP_188026.1 UniGene:At.22594
UniGene:At.70203 ProteinModelPortal:Q9LJH8 SMR:Q9LJH8 IntAct:Q9LJH8
STRING:Q9LJH8 PRIDE:Q9LJH8 EnsemblPlants:AT3G14100.1 GeneID:820626
KEGG:ath:AT3G14100 TAIR:At3g14100 InParanoid:Q9LJH8
PhylomeDB:Q9LJH8 ProtClustDB:CLSN2682164 Genevestigator:Q9LJH8
Uniprot:Q9LJH8
Length = 427
Score = 108 (43.1 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 37/124 (29%), Positives = 55/124 (44%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKXXXXXXXXXXXXXXA--SNGAPGQGPQS------EGD 52
+ EMNG + SSR +R AT + G+ G ++ E +
Sbjct: 202 INEMNGKWLSSRQIRCNWATKGATSGDDKLSSDGKSVVELTTGSSEDGKETLNEETPENN 261
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGE--IASVKIPVGKGCGFVQFANSLGQIMAING 110
S TT++VG L P VT DL + F G I V++ KG GFV++ +AI
Sbjct: 262 SQFTTVYVGNLAPEVTQLDLHRYFHALGAGVIEEVRVQRDKGFGFVRYNTHPEAALAIQ- 320
Query: 111 VGHT 114
+G+T
Sbjct: 321 MGNT 324
Score = 101 (40.6 bits), Expect = 0.00051, P = 0.00051
Identities = 33/87 (37%), Positives = 41/87 (47%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI----PVGK--GC 93
N A G Q E SS+ IFVG L P VTD L Q FS + + ++ G+ G
Sbjct: 129 NWAYATG-QREDTSSHFNIFVGDLSPEVTDATLYQSFSVFSSCSDARVMWDQKTGRSRGF 187
Query: 94 GFVQFANSLGQIMAINGVGHTMEGKFM 120
GFV F N AIN M GK++
Sbjct: 188 GFVSFRNQQDAQTAIN----EMNGKWL 210
>WB|WBGene00007396 [details] [associations]
symbol:tiar-3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0019722
"calcium-mediated signaling" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0009792 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
eggNOG:COG0724 GeneTree:ENSGT00680000099967 EMBL:Z78536
RefSeq:NP_509705.3 ProteinModelPortal:Q93194 SMR:Q93194
EnsemblMetazoa:C07A4.1 GeneID:182350 KEGG:cel:CELE_C07A4.1
UCSC:C07A4.1 CTD:182350 WormBase:C07A4.1 OMA:ASEPPME Uniprot:Q93194
Length = 450
Score = 107 (42.7 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 32/95 (33%), Positives = 45/95 (47%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVG 112
+ NT+++VG + TD DLR FS YG+IA V+I + FV++ AI
Sbjct: 324 ADNTSVYVGNISQQTTDADLRDLFSTYGDIAEVRIFKTQRYAFVRYEKKECATKAIM--- 380
Query: 113 HTMEGKFMMVMGMLFRHQMTQACTLQQLRPMGLTL 147
M GK M + TQA Q L P+ + L
Sbjct: 381 -EMNGKEMAGNQVRCSWGRTQAVPNQALNPLPIDL 414
>TAIR|locus:2058573 [details] [associations]
symbol:PAB4 "AT2G23350" species:3702 "Arabidopsis
thaliana" [GO:0003723 "RNA binding" evidence=ISS] [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0046686
"response to cadmium ion" evidence=IEP] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000504 InterPro:IPR002004 InterPro:IPR006515
InterPro:IPR012677 Pfam:PF00076 Pfam:PF00658 PROSITE:PS50102
PROSITE:PS51309 SMART:SM00360 SMART:SM00517 GO:GO:0005829
GO:GO:0046686 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003723 EMBL:AC002391 eggNOG:COG0724
KO:K13126 Gene3D:1.10.1900.10 SUPFAM:SSF63570 TIGRFAMs:TIGR01628
HOGENOM:HOG000217922 HSSP:P11940 OMA:MIRITYS EMBL:AY050859
EMBL:AY079389 IPI:IPI00530940 PIR:T00497 RefSeq:NP_179916.1
UniGene:At.25439 ProteinModelPortal:O22173 SMR:O22173 IntAct:O22173
STRING:O22173 PaxDb:O22173 PRIDE:O22173 ProMEX:O22173
EnsemblPlants:AT2G23350.1 GeneID:816867 KEGG:ath:AT2G23350
TAIR:At2g23350 InParanoid:O22173 PhylomeDB:O22173
ProtClustDB:CLSN2913301 Genevestigator:O22173 Uniprot:O22173
Length = 662
Score = 109 (43.4 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 33/107 (30%), Positives = 51/107 (47%)
Query: 45 QGPQSEGDS-SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVG--KGCGFVQF 98
QG G+ ++V LD VTDE LR+ F+++G I S K+ P G KG GFV F
Sbjct: 316 QGSSDGGNKFDGLNLYVKNLDDTVTDEKLRELFAEFGTITSCKVMRDPSGTSKGSGFVAF 375
Query: 99 ANSLGQIMAINGVGHTMEGKFMMVMGMLFRHQMTQA---CTLQQLRP 142
+ + +N + M G + + + R + +A Q+RP
Sbjct: 376 SAASEASRVLNEMNGKMVGGKPLYVALAQRKEERRAKLQAQFSQMRP 422
>WB|WBGene00006331 [details] [associations]
symbol:sup-26 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0017148 "negative regulation of translation"
evidence=IMP] [GO:0003730 "mRNA 3'-UTR binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0017148
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0040011 GO:GO:0003730
EMBL:Z50874 GeneTree:ENSGT00630000089747 GeneID:175551
KEGG:cel:CELE_R10E4.2 CTD:175551 RefSeq:NP_001254892.1
ProteinModelPortal:D5MCR3 SMR:D5MCR3 EnsemblMetazoa:R10E4.2q
WormBase:R10E4.2q ArrayExpress:D5MCR3 Uniprot:D5MCR3
Length = 476
Score = 107 (42.7 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 30/79 (37%), Positives = 43/79 (54%)
Query: 42 APGQGPQSEGDS---SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------G 92
AP +G Q DS S+T +++ GL PN D+ LR+ S+YG IAS K + K G
Sbjct: 132 AP-RGDQQHHDSTPLSSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKG 190
Query: 93 CGFVQFANSLGQIMAINGV 111
GFV F + A++G+
Sbjct: 191 YGFVDFESPQAAAAAVDGL 209
>WB|WBGene00001999 [details] [associations]
symbol:hrp-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0040015 "negative regulation of
multicellular organism growth" evidence=IMP] [GO:0048477
"oogenesis" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0000781 "chromosome, telomeric region" evidence=IDA]
[GO:0031581 "hemidesmosome assembly" evidence=IGI] [GO:0000398
"mRNA splicing, via spliceosome" evidence=ISS] [GO:0003723 "RNA
binding" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0008340 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0048477 GO:GO:0003723 GO:GO:0040035 GO:GO:0030529
GO:GO:0040015 GO:GO:0000398 GO:GO:0000781 eggNOG:COG0724
GO:GO:0031581 GeneTree:ENSGT00700000104255 KO:K12741 EMBL:D10877
EMBL:FO081370 PIR:S35500 RefSeq:NP_001023199.1
RefSeq:NP_001040944.1 RefSeq:NP_001040945.1 RefSeq:NP_500326.2
UniGene:Cel.7537 ProteinModelPortal:Q22037 SMR:Q22037 IntAct:Q22037
STRING:Q22037 PaxDb:Q22037 PRIDE:Q22037 EnsemblMetazoa:F42A6.7a.1
EnsemblMetazoa:F42A6.7a.2 GeneID:177101 KEGG:cel:CELE_F42A6.7
UCSC:F42A6.7a.1 CTD:177101 WormBase:F42A6.7a WormBase:F42A6.7b
WormBase:F42A6.7c WormBase:F42A6.7d InParanoid:Q22037 OMA:YGGGWGQ
NextBio:895332 Uniprot:Q22037
Length = 346
Score = 105 (42.0 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 29/81 (35%), Positives = 41/81 (50%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGK---GCGFVQ 97
G G S + IFVGGL N TD+ +R+ +SQ+GEI + + P K G GFV
Sbjct: 11 GSGDASLEPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVT 70
Query: 98 FANSLGQIMAINGVGHTMEGK 118
F+ A+ H ++GK
Sbjct: 71 FSGKTEVDAAMKQRPHIIDGK 91
>UNIPROTKB|F1PL96 [details] [associations]
symbol:DAZL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00530000063480 EMBL:AAEX03013583
Ensembl:ENSCAFT00000009460 Uniprot:F1PL96
Length = 413
Score = 106 (42.4 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 26/71 (36%), Positives = 38/71 (53%)
Query: 38 ASNGAPGQG-PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-----PVGK 91
+S+ QG EG T+FVGG+D + + ++R F++YG + VKI V K
Sbjct: 22 SSSATTSQGYVLPEGKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSK 81
Query: 92 GCGFVQFANSL 102
G GFV F N +
Sbjct: 82 GYGFVSFYNDV 92
>UNIPROTKB|E1C0P9 [details] [associations]
symbol:U2SURP "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0006396 "RNA
processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000061 InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 Pfam:PF01805 PROSITE:PS50102 PROSITE:PS50128
SMART:SM00360 SMART:SM00648 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0006396 InterPro:IPR008942
SUPFAM:SSF48464 InterPro:IPR006569 SMART:SM00582 SUPFAM:SSF109905
PROSITE:PS51391 InterPro:IPR013170 Pfam:PF08312 OMA:SILQANS
GeneTree:ENSGT00390000010687 EMBL:AADN02024092 EMBL:AADN02024093
EMBL:AADN02024094 IPI:IPI00583949 ProteinModelPortal:E1C0P9
Ensembl:ENSGALT00000004113 Uniprot:E1C0P9
Length = 985
Score = 110 (43.8 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 31/92 (33%), Positives = 45/92 (48%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI--PVG-------KG 92
APG GD S T +++G ++P + +E L Q F ++G +ASVKI P +
Sbjct: 219 APGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERN 276
Query: 93 CGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
CGFV F N A+ + M F M +G
Sbjct: 277 CGFVAFMNRRDAERALKNLNGKMIMSFEMKLG 308
>RGD|1307882 [details] [associations]
symbol:U2surp "U2 snRNP-associated SURP domain containing"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000061
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 Pfam:PF01805
PROSITE:PS50102 PROSITE:PS50128 SMART:SM00360 SMART:SM00648
RGD:1307882 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723
GO:GO:0006396 InterPro:IPR008942 SUPFAM:SSF48464 InterPro:IPR006569
SMART:SM00582 SUPFAM:SSF109905 PROSITE:PS51391 InterPro:IPR013170
Pfam:PF08312 CTD:23350 KO:K12842 GeneTree:ENSGT00390000010687
IPI:IPI00370764 RefSeq:XP_002727165.1 RefSeq:XP_002730000.1
ProteinModelPortal:D4A4B4 Ensembl:ENSRNOT00000011609 GeneID:315903
KEGG:rno:315903 UCSC:RGD:1307882 NextBio:670025 ArrayExpress:D4A4B4
Uniprot:D4A4B4
Length = 985
Score = 110 (43.8 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 31/92 (33%), Positives = 45/92 (48%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI--PVG-------KG 92
APG GD S T +++G ++P + +E L Q F ++G +ASVKI P +
Sbjct: 218 APGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERN 275
Query: 93 CGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
CGFV F N A+ + M F M +G
Sbjct: 276 CGFVAFMNRRDAERALKNLNGKMIMSFEMKLG 307
>UNIPROTKB|Q2KJ42 [details] [associations]
symbol:NONO "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042802 "identical protein binding" evidence=ISS]
[GO:0042382 "paraspeckles" evidence=IEA] [GO:0016363 "nuclear
matrix" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0042802 GO:GO:0016363 GO:GO:0042382 InterPro:IPR012975
Pfam:PF08075 eggNOG:NOG298586 GeneTree:ENSGT00390000005004 CTD:4841
HOGENOM:HOG000231095 HOVERGEN:HBG009801 KO:K13214 OrthoDB:EOG4ZCT50
EMBL:DAAA02072840 EMBL:BC105532 IPI:IPI00699994
RefSeq:NP_001040019.1 UniGene:Bt.37860 SMR:Q2KJ42
Ensembl:ENSBTAT00000016122 GeneID:615175 KEGG:bta:615175
InParanoid:Q2KJ42 NextBio:20899485 Uniprot:Q2KJ42
Length = 470
Score = 106 (42.4 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 23/77 (29%), Positives = 42/77 (54%)
Query: 47 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF-ANSLGQI 105
P + + + +FVG L P++T+E++R+ F +YG+ V I KG GF++ +L +I
Sbjct: 64 PGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEI 123
Query: 106 MAINGVGHTMEGKFMMV 122
+ + GK + V
Sbjct: 124 AKVELDNMPLRGKQLRV 140
>UNIPROTKB|F1PTP3 [details] [associations]
symbol:NONO "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR012975
Pfam:PF08075 GeneTree:ENSGT00390000005004 CTD:4841 KO:K13214
OMA:NQQYHKE EMBL:AAEX03026487 RefSeq:XP_849110.1
ProteinModelPortal:F1PTP3 Ensembl:ENSCAFT00000027037 GeneID:612773
KEGG:cfa:612773 Uniprot:F1PTP3
Length = 470
Score = 106 (42.4 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 23/77 (29%), Positives = 42/77 (54%)
Query: 47 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF-ANSLGQI 105
P + + + +FVG L P++T+E++R+ F +YG+ V I KG GF++ +L +I
Sbjct: 64 PGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEI 123
Query: 106 MAINGVGHTMEGKFMMV 122
+ + GK + V
Sbjct: 124 AKVELDNMPLRGKQLRV 140
>UNIPROTKB|F1Q0F6 [details] [associations]
symbol:F1Q0F6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR012975
Pfam:PF08075 GeneTree:ENSGT00390000005004 EMBL:AAEX03010245
ProteinModelPortal:F1Q0F6 Ensembl:ENSCAFT00000005152 OMA:LEFEMES
Uniprot:F1Q0F6
Length = 470
Score = 106 (42.4 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 23/77 (29%), Positives = 42/77 (54%)
Query: 47 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF-ANSLGQI 105
P + + + +FVG L P++T+E++R+ F +YG+ V I KG GF++ +L +I
Sbjct: 64 PGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEI 123
Query: 106 MAINGVGHTMEGKFMMV 122
+ + GK + V
Sbjct: 124 AKVELDNMPLRGKQLRV 140
>UNIPROTKB|Q15233 [details] [associations]
symbol:NONO "Non-POU domain-containing octamer-binding
protein" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0042382 "paraspeckles"
evidence=IDA] [GO:0005634 "nucleus" evidence=TAS] [GO:0042802
"identical protein binding" evidence=IPI] [GO:0016363 "nuclear
matrix" evidence=IDA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005730
GO:GO:0006355 GO:GO:0008380 GO:GO:0000166 GO:GO:0003677
GO:GO:0016607 GO:GO:0006281 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0006351 GO:GO:0003723 GO:GO:0006310 GO:GO:0016363
EMBL:CH471132 Pathway_Interaction_DB:circadianpathway GO:GO:0042382
InterPro:IPR012975 Pfam:PF08075 eggNOG:NOG298586 EMBL:L14599
EMBL:U89867 EMBL:Y11289 EMBL:Y11290 EMBL:Y11291 EMBL:Y11292
EMBL:Y11293 EMBL:Y11294 EMBL:Y11295 EMBL:Y11296 EMBL:Y11297
EMBL:Y11298 EMBL:U02493 EMBL:AK297144 EMBL:CR456761 EMBL:AL590762
EMBL:BC002364 EMBL:BC003129 EMBL:BC012141 EMBL:BC028299
EMBL:BC069616 EMBL:BC069639 IPI:IPI00304596 IPI:IPI00922367
PIR:G01211 PIR:S29769 PIR:S41768 RefSeq:NP_001138880.1
RefSeq:NP_001138881.1 RefSeq:NP_001138882.1 RefSeq:NP_031389.3
UniGene:Hs.533282 UniGene:Hs.700344 PDB:3SDE PDBsum:3SDE
ProteinModelPortal:Q15233 SMR:Q15233 DIP:DIP-29951N IntAct:Q15233
MINT:MINT-1131452 STRING:Q15233 PhosphoSite:Q15233 DMDM:67469924
REPRODUCTION-2DPAGE:IPI00304596 SWISS-2DPAGE:Q15233 PaxDb:Q15233
PeptideAtlas:Q15233 PRIDE:Q15233 DNASU:4841 Ensembl:ENST00000276079
Ensembl:ENST00000373841 Ensembl:ENST00000373856
Ensembl:ENST00000535149 GeneID:4841 KEGG:hsa:4841 UCSC:uc004dzn.3
CTD:4841 GeneCards:GC0XP070503 HGNC:HGNC:7871 HPA:CAB022069
MIM:300084 neXtProt:NX_Q15233 PharmGKB:PA31680 HOGENOM:HOG000231095
HOVERGEN:HBG009801 InParanoid:Q15233 KO:K13214 OMA:NQQYHKE
OrthoDB:EOG4ZCT50 PhylomeDB:Q15233 GenomeRNAi:4841 NextBio:18654
PMAP-CutDB:Q15233 ArrayExpress:Q15233 Bgee:Q15233 CleanEx:HS_NONO
Genevestigator:Q15233 GermOnline:ENSG00000147140 Uniprot:Q15233
Length = 471
Score = 106 (42.4 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 23/77 (29%), Positives = 42/77 (54%)
Query: 47 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF-ANSLGQI 105
P + + + +FVG L P++T+E++R+ F +YG+ V I KG GF++ +L +I
Sbjct: 65 PGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEI 124
Query: 106 MAINGVGHTMEGKFMMV 122
+ + GK + V
Sbjct: 125 AKVELDNMPLRGKQLRV 141
>UNIPROTKB|I3LSU1 [details] [associations]
symbol:NONO "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0042382 "paraspeckles" evidence=IEA] [GO:0016363 "nuclear
matrix" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0016363 GO:GO:0042382 InterPro:IPR012975 Pfam:PF08075
GeneTree:ENSGT00390000005004 OMA:NQQYHKE Ensembl:ENSSSCT00000031783
Uniprot:I3LSU1
Length = 471
Score = 106 (42.4 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 23/77 (29%), Positives = 42/77 (54%)
Query: 47 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF-ANSLGQI 105
P + + + +FVG L P++T+E++R+ F +YG+ V I KG GF++ +L +I
Sbjct: 65 PGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEI 124
Query: 106 MAINGVGHTMEGKFMMV 122
+ + GK + V
Sbjct: 125 AKVELDNMPLRGKQLRV 141
>UNIPROTKB|Q5ZIZ5 [details] [associations]
symbol:NONO "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IEA] [GO:0042382 "paraspeckles" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0016363
GO:GO:0042382 InterPro:IPR012975 Pfam:PF08075 eggNOG:NOG298586
GeneTree:ENSGT00390000005004 CTD:4841 HOGENOM:HOG000231095
HOVERGEN:HBG009801 KO:K13214 OMA:NQQYHKE OrthoDB:EOG4ZCT50
EMBL:AADN02013229 EMBL:AADN02013230 EMBL:AJ720639 IPI:IPI00603370
RefSeq:NP_001026703.1 UniGene:Gga.4549 SMR:Q5ZIZ5
Ensembl:ENSGALT00000008838 GeneID:428701 KEGG:gga:428701
InParanoid:Q5ZIZ5 NextBio:20829624 Uniprot:Q5ZIZ5
Length = 473
Score = 106 (42.4 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 23/77 (29%), Positives = 42/77 (54%)
Query: 47 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF-ANSLGQI 105
P + + + +FVG L P++T+E++R+ F +YG+ V I KG GF++ +L +I
Sbjct: 65 PGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEI 124
Query: 106 MAINGVGHTMEGKFMMV 122
+ + GK + V
Sbjct: 125 AKVELDNMPLRGKQLRV 141
>MGI|MGI:1855692 [details] [associations]
symbol:Nono "non-POU-domain-containing, octamer binding
protein" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016363 "nuclear
matrix" evidence=ISO] [GO:0042382 "paraspeckles" evidence=ISO]
[GO:0042802 "identical protein binding" evidence=ISO]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 MGI:MGI:1855692 GO:GO:0005730 GO:GO:0006355
GO:GO:0008380 GO:GO:0000166 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0006351
GO:GO:0003723 GO:GO:0006310 GO:GO:0016363 GO:GO:0042382
InterPro:IPR012975 Pfam:PF08075 eggNOG:NOG298586
GeneTree:ENSGT00390000005004 CTD:4841 HOVERGEN:HBG009801 KO:K13214
OrthoDB:EOG4ZCT50 EMBL:S64860 EMBL:AK004830 EMBL:AK013444
EMBL:AK028338 EMBL:BC005465 EMBL:BC083074 IPI:IPI00320016
IPI:IPI00471251 RefSeq:NP_001239447.1 RefSeq:NP_075633.2
UniGene:Mm.280069 PDB:2CPJ PDB:2RS8 PDBsum:2CPJ PDBsum:2RS8
ProteinModelPortal:Q99K48 SMR:Q99K48 IntAct:Q99K48 STRING:Q99K48
PhosphoSite:Q99K48 PaxDb:Q99K48 PRIDE:Q99K48
Ensembl:ENSMUST00000033673 GeneID:53610 KEGG:mmu:53610
UCSC:uc009txr.2 InParanoid:Q99K48 ChiTaRS:NONO
EvolutionaryTrace:Q99K48 NextBio:310319 Bgee:Q99K48
Genevestigator:Q99K48 GermOnline:ENSMUSG00000031311 Uniprot:Q99K48
Length = 473
Score = 106 (42.4 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 23/77 (29%), Positives = 42/77 (54%)
Query: 47 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF-ANSLGQI 105
P + + + +FVG L P++T+E++R+ F +YG+ V I KG GF++ +L +I
Sbjct: 67 PGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEI 126
Query: 106 MAINGVGHTMEGKFMMV 122
+ + GK + V
Sbjct: 127 AKVELDNMPLRGKQLRV 143
>UNIPROTKB|E2R1V3 [details] [associations]
symbol:U2SURP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006396 "RNA processing" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000061 InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 Pfam:PF01805 PROSITE:PS50102
PROSITE:PS50128 SMART:SM00360 SMART:SM00648 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0006396 InterPro:IPR008942
SUPFAM:SSF48464 InterPro:IPR006569 SMART:SM00582 SUPFAM:SSF109905
PROSITE:PS51391 InterPro:IPR013170 Pfam:PF08312 OMA:SILQANS
GeneTree:ENSGT00390000010687 EMBL:AAEX03013650
Ensembl:ENSCAFT00000012763 Uniprot:E2R1V3
Length = 1028
Score = 110 (43.8 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 31/92 (33%), Positives = 45/92 (48%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI--PVG-------KG 92
APG GD S T +++G ++P + +E L Q F ++G +ASVKI P +
Sbjct: 261 APGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERN 318
Query: 93 CGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
CGFV F N A+ + M F M +G
Sbjct: 319 CGFVAFMNRRDAERALKNLNGKMIMSFEMKLG 350
>UNIPROTKB|E7ET15 [details] [associations]
symbol:U2SURP "U2 snRNP-associated SURP motif-containing
protein" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000061 InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 Pfam:PF01805 PROSITE:PS50102 PROSITE:PS50128
SMART:SM00360 SMART:SM00648 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0006396 InterPro:IPR008942
SUPFAM:SSF48464 InterPro:IPR006569 SMART:SM00582 SUPFAM:SSF109905
PROSITE:PS51391 InterPro:IPR013170 Pfam:PF08312 EMBL:AC018450
EMBL:AC026304 HGNC:HGNC:30855 ChiTaRS:u2surp IPI:IPI00966302
ProteinModelPortal:E7ET15 SMR:E7ET15 Ensembl:ENST00000493598
ArrayExpress:E7ET15 Bgee:E7ET15 Uniprot:E7ET15
Length = 1028
Score = 110 (43.8 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 31/92 (33%), Positives = 45/92 (48%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI--PVG-------KG 92
APG GD S T +++G ++P + +E L Q F ++G +ASVKI P +
Sbjct: 261 APGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERN 318
Query: 93 CGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
CGFV F N A+ + M F M +G
Sbjct: 319 CGFVAFMNRRDAERALKNLNGKMIMSFEMKLG 350
>UNIPROTKB|O15042 [details] [associations]
symbol:U2SURP "U2 snRNP-associated SURP motif-containing
protein" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR000061
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 Pfam:PF01805
PROSITE:PS50102 PROSITE:PS50128 SMART:SM00360 SMART:SM00648
GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723
GO:GO:0006396 InterPro:IPR008942 SUPFAM:SSF48464 InterPro:IPR006569
SMART:SM00582 SUPFAM:SSF109905 PROSITE:PS51391 InterPro:IPR013170
Pfam:PF08312 HSSP:Q9NQ94 EMBL:AC018450 EMBL:AC026304 EMBL:BC006474
EMBL:BC016323 EMBL:BC105604 EMBL:BC111692 EMBL:AB002330
EMBL:BK000564 IPI:IPI00143753 IPI:IPI00790699 IPI:IPI00829908
RefSeq:NP_001073884.1 UniGene:Hs.596572 ProteinModelPortal:O15042
SMR:O15042 IntAct:O15042 STRING:O15042 PhosphoSite:O15042
PaxDb:O15042 PRIDE:O15042 Ensembl:ENST00000319822
Ensembl:ENST00000397933 Ensembl:ENST00000473835 GeneID:23350
KEGG:hsa:23350 UCSC:uc003evh.1 UCSC:uc003evi.1 UCSC:uc003evk.1
CTD:23350 GeneCards:GC03P142720 H-InvDB:HIX0003746 HGNC:HGNC:30855
HPA:HPA037545 neXtProt:NX_O15042 eggNOG:NOG307351
HOGENOM:HOG000286037 HOVERGEN:HBG093996 InParanoid:O15042 KO:K12842
OMA:SILQANS OrthoDB:EOG47SSD9 ChiTaRS:u2surp GenomeRNAi:23350
NextBio:45335 PMAP-CutDB:O15042 ArrayExpress:O15042 Bgee:O15042
Genevestigator:O15042 Uniprot:O15042
Length = 1029
Score = 110 (43.8 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 31/92 (33%), Positives = 45/92 (48%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI--PVG-------KG 92
APG GD S T +++G ++P + +E L Q F ++G +ASVKI P +
Sbjct: 262 APGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERN 319
Query: 93 CGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
CGFV F N A+ + M F M +G
Sbjct: 320 CGFVAFMNRRDAERALKNLNGKMIMSFEMKLG 351
>UNIPROTKB|F1SKE6 [details] [associations]
symbol:U2SURP "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0006396 "RNA
processing" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000061
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 Pfam:PF01805
PROSITE:PS50102 PROSITE:PS50128 SMART:SM00360 SMART:SM00648
GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723
GO:GO:0006396 InterPro:IPR008942 SUPFAM:SSF48464 InterPro:IPR006569
SMART:SM00582 SUPFAM:SSF109905 PROSITE:PS51391 InterPro:IPR013170
Pfam:PF08312 CTD:23350 KO:K12842 OMA:SILQANS
GeneTree:ENSGT00390000010687 EMBL:FP236268 RefSeq:XP_003358644.1
Ensembl:ENSSSCT00000012792 GeneID:100517309 KEGG:ssc:100517309
Uniprot:F1SKE6
Length = 1029
Score = 110 (43.8 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 31/92 (33%), Positives = 45/92 (48%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI--PVG-------KG 92
APG GD S T +++G ++P + +E L Q F ++G +ASVKI P +
Sbjct: 262 APGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERN 319
Query: 93 CGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
CGFV F N A+ + M F M +G
Sbjct: 320 CGFVAFMNRRDAERALKNLNGKMIMSFEMKLG 351
>MGI|MGI:1915208 [details] [associations]
symbol:U2surp "U2 snRNP-associated SURP domain containing"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000061
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 Pfam:PF01805
PROSITE:PS50102 PROSITE:PS50128 SMART:SM00360 SMART:SM00648
MGI:MGI:1915208 GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003723 GO:GO:0006396 InterPro:IPR008942 SUPFAM:SSF48464
InterPro:IPR006569 SMART:SM00582 SUPFAM:SSF109905 PROSITE:PS51391
InterPro:IPR013170 Pfam:PF08312 CTD:23350 eggNOG:NOG307351
HOGENOM:HOG000286037 HOVERGEN:HBG093996 KO:K12842 OMA:SILQANS
OrthoDB:EOG47SSD9 EMBL:AC159895 EMBL:BC068265 EMBL:AK011588
EMBL:AK011796 IPI:IPI00411097 IPI:IPI00467507 IPI:IPI00830853
RefSeq:NP_001108449.1 RefSeq:NP_080752.2 UniGene:Mm.292742
UniGene:Mm.392755 HSSP:Q01085 ProteinModelPortal:Q6NV83 SMR:Q6NV83
STRING:Q6NV83 PhosphoSite:Q6NV83 PaxDb:Q6NV83 PRIDE:Q6NV83
Ensembl:ENSMUST00000078374 Ensembl:ENSMUST00000079659 GeneID:67958
KEGG:mmu:67958 UCSC:uc009rba.2 UCSC:uc009rbb.2 UCSC:uc009rbd.1
GeneTree:ENSGT00390000010687 InParanoid:Q6NV83 NextBio:326070
Bgee:Q6NV83 CleanEx:MM_2610101N10RIK Genevestigator:Q6NV83
Uniprot:Q6NV83
Length = 1029
Score = 110 (43.8 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 31/92 (33%), Positives = 45/92 (48%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI--PVG-------KG 92
APG GD S T +++G ++P + +E L Q F ++G +ASVKI P +
Sbjct: 262 APGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERN 319
Query: 93 CGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
CGFV F N A+ + M F M +G
Sbjct: 320 CGFVAFMNRRDAERALKNLNGKMIMSFEMKLG 351
>RGD|1549738 [details] [associations]
symbol:Nono "non-POU domain containing, octamer-binding"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005730 "nucleolus" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016363
"nuclear matrix" evidence=IEA;ISO] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0042382 "paraspeckles" evidence=IEA;ISO]
[GO:0042802 "identical protein binding" evidence=IEA;ISO]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 RGD:1549738 GO:GO:0005730 GO:GO:0006355 GO:GO:0008380
GO:GO:0000166 GO:GO:0003677 GO:GO:0016607 GO:GO:0006281
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0003723
GO:GO:0006310 InterPro:IPR012975 Pfam:PF08075 eggNOG:NOG298586
GeneTree:ENSGT00390000005004 CTD:4841 HOGENOM:HOG000231095
HOVERGEN:HBG009801 KO:K13214 OMA:NQQYHKE OrthoDB:EOG4ZCT50
EMBL:BC089880 IPI:IPI00205912 RefSeq:NP_001012356.1 UniGene:Rn.8381
ProteinModelPortal:Q5FVM4 SMR:Q5FVM4 IntAct:Q5FVM4 STRING:Q5FVM4
PhosphoSite:Q5FVM4 PRIDE:Q5FVM4 Ensembl:ENSRNOT00000004911
GeneID:317259 KEGG:rno:317259 UCSC:RGD:1549738 InParanoid:Q5FVM4
NextBio:671515 Genevestigator:Q5FVM4 GermOnline:ENSRNOG00000003689
Uniprot:Q5FVM4
Length = 476
Score = 106 (42.4 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 23/77 (29%), Positives = 42/77 (54%)
Query: 47 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF-ANSLGQI 105
P + + + +FVG L P++T+E++R+ F +YG+ V I KG GF++ +L +I
Sbjct: 70 PGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEI 129
Query: 106 MAINGVGHTMEGKFMMV 122
+ + GK + V
Sbjct: 130 AKVELDNMPLRGKQLRV 146
>UNIPROTKB|F1MHP1 [details] [associations]
symbol:U2SURP "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006396 "RNA
processing" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000061
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 Pfam:PF01805
PROSITE:PS50102 PROSITE:PS50128 SMART:SM00360 SMART:SM00648
GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723
GO:GO:0006396 InterPro:IPR008942 SUPFAM:SSF48464 InterPro:IPR006569
SMART:SM00582 SUPFAM:SSF109905 PROSITE:PS51391 InterPro:IPR013170
Pfam:PF08312 OMA:SILQANS GeneTree:ENSGT00390000010687
EMBL:DAAA02002870 IPI:IPI00701440 Ensembl:ENSBTAT00000012063
Uniprot:F1MHP1
Length = 1035
Score = 110 (43.8 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 31/92 (33%), Positives = 45/92 (48%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI--PVG-------KG 92
APG GD S T +++G ++P + +E L Q F ++G +ASVKI P +
Sbjct: 262 APGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERN 319
Query: 93 CGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
CGFV F N A+ + M F M +G
Sbjct: 320 CGFVAFMNRRDAERALKNLNGKMIMSFEMKLG 351
>DICTYBASE|DDB_G0293252 [details] [associations]
symbol:DDB_G0293252 "putative RNA binding protein"
species:44689 "Dictyostelium discoideum" [GO:0006396 "RNA
processing" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000061
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 Pfam:PF01805
PROSITE:PS50102 PROSITE:PS50128 SMART:SM00360 SMART:SM00648
dictyBase:DDB_G0293252 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003723 EMBL:AAFI02000200 GO:GO:0006396 Gene3D:1.25.40.90
InterPro:IPR008942 SUPFAM:SSF48464 InterPro:IPR006903
InterPro:IPR006569 Pfam:PF04818 SMART:SM00582 SUPFAM:SSF109905
PROSITE:PS51391 eggNOG:NOG314315 RefSeq:XP_629218.1
ProteinModelPortal:Q54C48 GeneID:8629100 KEGG:ddi:DDB_G0293252
InParanoid:Q54C48 OMA:FGKVENA Uniprot:Q54C48
Length = 691
Score = 108 (43.1 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 23/69 (33%), Positives = 39/69 (56%)
Query: 47 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIM 106
P E ++ +++G ++ NV+ E L+Q F Q+G + +++I G+GC FV F
Sbjct: 268 PHQE-ETPTKNLWLGNVNSNVSYELLKQIFDQFGNVDTIRILHGRGCAFVNFFTVESAAA 326
Query: 107 AINGVGHTM 115
A NG+ TM
Sbjct: 327 ARNGLNGTM 335
>TAIR|locus:2037633 [details] [associations]
symbol:RBP1 "RNA-binding protein 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0003727 "single-stranded RNA binding"
evidence=IDA] [GO:0008283 "cell proliferation" evidence=TAS]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 EMBL:CP002684 GO:GO:0000166 GO:GO:0008283
GO:GO:0003727 Gene3D:3.30.70.330 EMBL:AB077822 KO:K14411
EMBL:AC082643 HSSP:Q61474 EMBL:AY054536 EMBL:AY064643
IPI:IPI00548887 PIR:F96618 RefSeq:NP_176143.1 UniGene:At.17236
ProteinModelPortal:Q9C652 SMR:Q9C652 IntAct:Q9C652 STRING:Q9C652
PRIDE:Q9C652 EnsemblPlants:AT1G58470.1 GeneID:842216
KEGG:ath:AT1G58470 TAIR:At1g58470 InParanoid:Q9C652 OMA:VTYDSED
PhylomeDB:Q9C652 ProtClustDB:CLSN2914680 Genevestigator:Q9C652
Uniprot:Q9C652
Length = 360
Score = 104 (41.7 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 28/88 (31%), Positives = 45/88 (51%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP----VGK--GCGFVQFANSLGQI 105
D +FVGG+ ++E L+Q FS+YG + + GK G GFV+FAN +
Sbjct: 2 DYDRYKLFVGGIAKETSEEALKQYFSRYGAVLEAVVAKEKVTGKPRGFGFVRFANDCDVV 61
Query: 106 MAINGVGHTMEGKFMMVMGMLFRHQMTQ 133
A+ H + GK + V + +H++ Q
Sbjct: 62 KALRDT-HFILGKPVDVRKAIRKHELYQ 88
>DICTYBASE|DDB_G0274995 [details] [associations]
symbol:DDB_G0274995 "Uncharacterized RNA-binding
protein YPL184C" species:44689 "Dictyostelium discoideum"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
dictyBase:DDB_G0274995 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:AAFI02000012 eggNOG:NOG314315 RefSeq:XP_644288.1
ProteinModelPortal:Q86AS4 EnsemblProtists:DDB0217588 GeneID:8619716
KEGG:ddi:DDB_G0274995 InParanoid:Q86AS4 OMA:WIENTRT Uniprot:Q86AS4
Length = 1104
Score = 110 (43.8 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 27/86 (31%), Positives = 47/86 (54%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLG 103
G G + E + ++VG + +V+++DL+ F +GE+ SV+I K C FV F ++
Sbjct: 903 GDG-EDEDHLPSRVLWVGNIGMDVSEDDLKYEFGSFGELESVRILHNKYCAFVNFKDTNE 961
Query: 104 QIMAINGVGHTMEGKFMMVMGMLFRH 129
I A G+ + + G +V+ FRH
Sbjct: 962 AINAKKGMHNQVLGSQYIVVN--FRH 985
>UNIPROTKB|G3N361 [details] [associations]
symbol:NONO "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0042382 "paraspeckles" evidence=IEA] [GO:0016363 "nuclear
matrix" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0016363 GO:GO:0042382 InterPro:IPR012975 Pfam:PF08075
GeneTree:ENSGT00390000005004 OMA:NQQYHKE EMBL:DAAA02072840
Ensembl:ENSBTAT00000063337 Uniprot:G3N361
Length = 528
Score = 106 (42.4 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 23/77 (29%), Positives = 42/77 (54%)
Query: 47 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF-ANSLGQI 105
P + + + +FVG L P++T+E++R+ F +YG+ V I KG GF++ +L +I
Sbjct: 122 PGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEI 181
Query: 106 MAINGVGHTMEGKFMMV 122
+ + GK + V
Sbjct: 182 AKVELDNMPLRGKQLRV 198
>FB|FBgn0034572 [details] [associations]
symbol:CG9346 species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0006396 "RNA
processing" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000061 InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 Pfam:PF01805 PROSITE:PS50102 PROSITE:PS50128
SMART:SM00360 SMART:SM00648 GO:GO:0000166 GO:GO:0003729
Gene3D:3.30.70.330 GO:GO:0006396 InterPro:IPR008942 SUPFAM:SSF48464
eggNOG:COG0724 InterPro:IPR006569 SMART:SM00582 SUPFAM:SSF109905
PROSITE:PS51391 InterPro:IPR013170 Pfam:PF08312 EMBL:AY069521
UniGene:Dm.2090 ProteinModelPortal:Q7K0X5 PaxDb:Q7K0X5 PRIDE:Q7K0X5
FlyBase:FBgn0034572 InParanoid:Q7K0X5 OrthoDB:EOG469P8S
ArrayExpress:Q7K0X5 Bgee:Q7K0X5 Uniprot:Q7K0X5
Length = 958
Score = 109 (43.4 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 26/92 (28%), Positives = 49/92 (53%)
Query: 39 SNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI--PV------- 89
S+ + G GD + T +++G L+P ++++ L + F +YG +AS+KI P
Sbjct: 199 SSSSKESGSFDTGDPNTTNLYLGNLNPKISEQQLMEIFGRYGPLASIKIMWPRSEEEKQR 258
Query: 90 GKGCGFVQFANSLGQIMAINGVGHTMEGKFMM 121
G+ CGFV + + A+ T+ G+++M
Sbjct: 259 GRNCGFVAYMSRKDAERALK----TLNGRYIM 286
>DICTYBASE|DDB_G0272108 [details] [associations]
symbol:DDB_G0272108 "RNA-binding region RNP-1
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 dictyBase:DDB_G0272108 GO:GO:0000166
Gene3D:3.30.70.330 GenomeReviews:CM000151_GR GO:GO:0003676
EMBL:AAFI02000008 RefSeq:XP_645138.2 ProteinModelPortal:Q55A46
EnsemblProtists:DDB0220129 GeneID:8618308 KEGG:ddi:DDB_G0272108
InParanoid:Q55A46 Uniprot:Q55A46
Length = 469
Score = 105 (42.0 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 27/81 (33%), Positives = 44/81 (54%)
Query: 39 SNGAPGQGPQSEGDSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQ 97
SNG G P+ +N+ IFVG L P ++ L F ++GEI S+++ +G FV
Sbjct: 231 SNG--GFQPREYSPKNNSNAIFVGDLTPIAQEQTLNNIFKEFGEITSIRLFPSRGFAFVN 288
Query: 98 FANSLGQIMAINGV-GHTMEG 117
+ +S + AI G+ G ++G
Sbjct: 289 YKDSESCVRAIAGMNGGLVDG 309
>CGD|CAL0003460 [details] [associations]
symbol:orf19.5989 species:5476 "Candida albicans" [GO:0010494
"cytoplasmic stress granule" evidence=IEA] [GO:0005849 "mRNA
cleavage factor complex" evidence=IEA] [GO:0006379 "mRNA cleavage"
evidence=IEA] [GO:0006378 "mRNA polyadenylation" evidence=IEA]
[GO:0003729 "mRNA binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
CGD:CAL0003460 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:AACQ01000003 EMBL:AACQ01000004 eggNOG:COG0724 KO:K14411
RefSeq:XP_723052.1 RefSeq:XP_723199.1 ProteinModelPortal:Q5ANB5
SMR:Q5ANB5 STRING:Q5ANB5 GeneID:3635162 GeneID:3635323
KEGG:cal:CaO19.13410 KEGG:cal:CaO19.5989 Uniprot:Q5ANB5
Length = 475
Score = 105 (42.0 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 33/104 (31%), Positives = 49/104 (47%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFV 96
P + E IFVGG+DP VT+E+ FSQ+G+I ++ + K G GFV
Sbjct: 233 PKRAISKEDQEKVGKIFVGGIDPMVTEEEFDNFFSQFGKIIDCQLMIDKDTGRSRGFGFV 292
Query: 97 QFANSLG-QIMAINGVGHTMEGKFMMVMGMLFRHQMTQACTLQQ 139
+ + + +N T++GK M V R Q Q +QQ
Sbjct: 293 TYDSPAAVDKVCVNKY-LTLKGKAMEVKRAAPRGQHNQQVMMQQ 335
>UNIPROTKB|F1NDG5 [details] [associations]
symbol:374274 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00680000099967 EMBL:AADN02030982 IPI:IPI00680068
Ensembl:ENSGALT00000033037 ArrayExpress:F1NDG5 Uniprot:F1NDG5
Length = 56
Score = 95 (38.5 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 21/56 (37%), Positives = 32/56 (57%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI----PVGK--GCGFVQFANSL 102
S + +FVG L P +T ED++ F+ +G+I+ ++ GK G GFV F N L
Sbjct: 1 SDHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKL 56
>FB|FBgn0037220 [details] [associations]
symbol:CG14641 species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IC] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] InterPro:IPR000504 InterPro:IPR000571
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 PROSITE:PS50103
SMART:SM00356 SMART:SM00360 EMBL:AE014297 GO:GO:0000166
GO:GO:0046872 GO:GO:0008270 GO:GO:0003729 Gene3D:3.30.70.330
GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 eggNOG:NOG277760
KO:K12872 GO:GO:0000381 HSSP:P33240 GeneTree:ENSGT00390000002792
OMA:CAFVQYT EMBL:AY061516 RefSeq:NP_649440.3 UniGene:Dm.3575
SMR:Q95RB1 IntAct:Q95RB1 MINT:MINT-289131 STRING:Q95RB1
EnsemblMetazoa:FBtr0078985 GeneID:40529 KEGG:dme:Dmel_CG14641
UCSC:CG14641-RA FlyBase:FBgn0037220 InParanoid:Q95RB1
OrthoDB:EOG4N5TC7 GenomeRNAi:40529 NextBio:819204 Uniprot:Q95RB1
Length = 418
Score = 103 (41.3 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF 98
D + TT++VG L +T+ +LR F Q+GEI S+ + + C FVQ+
Sbjct: 228 DRNITTLYVGNLPEEITEPELRDQFYQFGEIRSIALVPRQQCAFVQY 274
>TAIR|locus:2014340 [details] [associations]
symbol:UBP1A "oligouridylate-binding protein 1A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003730 "mRNA 3'-UTR binding" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0006007 "glucose catabolic process" evidence=RCA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 EMBL:CP002684 GO:GO:0005886 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 KO:K13201 IPI:IPI00516341
RefSeq:NP_849806.1 UniGene:At.23098 ProteinModelPortal:F4HV67
SMR:F4HV67 PRIDE:F4HV67 EnsemblPlants:AT1G54080.2 GeneID:841846
KEGG:ath:AT1G54080 OMA:YEHRHAT PhylomeDB:F4HV67 Uniprot:F4HV67
Length = 430
Score = 103 (41.3 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 35/108 (32%), Positives = 50/108 (46%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKXXXXXXXXXXXXXXA--SNGAPGQGPQ-SEGDS--SN 55
+ EMNG + SSR +R AT +NG+ G + S D+ +N
Sbjct: 210 INEMNGKWVSSRQIRCNWATKGATFGEDKHSSDGKSVVELTNGSSEDGRELSNEDAPENN 269
Query: 56 ---TTIFVGGLDPNVTDEDLRQPFSQYGE--IASVKIPVGKGCGFVQF 98
TT++VG L P VT DL + F G I V++ KG GFV++
Sbjct: 270 PQFTTVYVGNLSPEVTQLDLHRLFYTLGAGVIEEVRVQRDKGFGFVRY 317
>UNIPROTKB|G3MY63 [details] [associations]
symbol:BOLL "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00530000063480 EMBL:DAAA02005516 EMBL:DAAA02005517
EMBL:DAAA02005518 Ensembl:ENSBTAT00000065390 Uniprot:G3MY63
Length = 271
Score = 102 (41.0 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 24/46 (52%), Positives = 28/46 (60%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQF 98
IFVGG+D + DLR+ FSQYG + VKI V KG GFV F
Sbjct: 47 IFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTF 92
>UNIPROTKB|Q8N9W6 [details] [associations]
symbol:BOLL "Protein boule-like" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008494
"translation activator activity" evidence=IDA] [GO:0045948
"positive regulation of translational initiation" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007126 "meiosis"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0007275 GO:GO:0007126
GO:GO:0005737 GO:GO:0030154 GO:GO:0000166 EMBL:CH471063
Gene3D:3.30.70.330 GO:GO:0007283 GO:GO:0003723 GO:GO:0008494
EMBL:AF272858 EMBL:AM295005 EMBL:AK058099 EMBL:AK093453
EMBL:AK097795 EMBL:AC011997 EMBL:BC033674 IPI:IPI00056506
IPI:IPI00377133 IPI:IPI00396276 IPI:IPI00871244 RefSeq:NP_149019.1
RefSeq:NP_932074.1 UniGene:Hs.169797 ProteinModelPortal:Q8N9W6
SMR:Q8N9W6 IntAct:Q8N9W6 STRING:Q8N9W6 PhosphoSite:Q8N9W6
DMDM:44887719 PRIDE:Q8N9W6 DNASU:66037 Ensembl:ENST00000321801
Ensembl:ENST00000392296 Ensembl:ENST00000433157 GeneID:66037
KEGG:hsa:66037 UCSC:uc002uur.2 UCSC:uc002uus.2 UCSC:uc002uut.2
UCSC:uc002uuu.1 CTD:66037 GeneCards:GC02M198591 H-InvDB:HIX0030239
HGNC:HGNC:14273 HPA:HPA018678 MIM:606165 neXtProt:NX_Q8N9W6
PharmGKB:PA25397 eggNOG:NOG260394 HOGENOM:HOG000095250
HOVERGEN:HBG048761 OrthoDB:EOG4MPHQQ GenomeRNAi:66037 NextBio:67546
ArrayExpress:Q8N9W6 Bgee:Q8N9W6 CleanEx:HS_BOLL
Genevestigator:Q8N9W6 GermOnline:ENSG00000152430 GO:GO:0045948
Uniprot:Q8N9W6
Length = 283
Score = 102 (41.0 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 24/46 (52%), Positives = 28/46 (60%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQF 98
IFVGG+D + DLR+ FSQYG + VKI V KG GFV F
Sbjct: 35 IFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTF 80
>UNIPROTKB|Q9QX80 [details] [associations]
symbol:Hnrnpab "Hnrpab protein" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:69255 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0030529 EMBL:CH473948 HOGENOM:HOG000234441 HOVERGEN:HBG002295
HSSP:Q14103 GeneTree:ENSGT00700000104347 KO:K13044
InterPro:IPR012956 Pfam:PF08143 CTD:3182 EMBL:AC105470
EMBL:AF216753 EMBL:BC066664 EMBL:AJ238855 IPI:IPI00212723
PIR:PC4375 PIR:PC4376 PIR:PC4377 RefSeq:NP_112620.2
RefSeq:XP_003750864.1 UniGene:Rn.1427 UniGene:Rn.217734 SMR:Q9QX80
STRING:Q9QX80 Ensembl:ENSRNOT00000033056 GeneID:100910156
GeneID:83498 KEGG:rno:100910156 KEGG:rno:83498 NextBio:615904
Genevestigator:Q9QX80 Uniprot:Q9QX80
Length = 285
Score = 102 (41.0 bits), Expect = 0.00010, P = 0.00010
Identities = 30/91 (32%), Positives = 47/91 (51%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV----GKGCGFVQFANSLGQIMAINGVGH 113
IFVGGL+P T+E +R+ F Q+GEI ++++P+ K GFV F + + V
Sbjct: 161 IFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFV-FITFKEE----DPVKK 215
Query: 114 TMEGKFMMVMGMLFRHQMTQACTLQQLRPMG 144
+E KF V G ++ Q + Q + G
Sbjct: 216 VLEKKFHTVSGSKCEIKVAQPKEVYQQQQYG 246
Score = 99 (39.9 bits), Expect = 0.00064, P = 0.00064
Identities = 28/109 (25%), Positives = 48/109 (44%)
Query: 17 GAATPRKXXXXXXXXXXXXXXASNGAPG-QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQP 75
GAA P NGA G Q S+ + +FVGGL + + +DL+
Sbjct: 35 GAAAPATPAGSGGGTTAAPSGNQNGAEGDQINASKNEEDAGKMFVGGLSWDTSKKDLKDY 94
Query: 76 FSQYGEIASVKIPV------GKGCGFVQFANSLGQIMAINGVGHTMEGK 118
F+++GE+ I + +G GF+ F +S ++ H ++G+
Sbjct: 95 FTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQKEHRLDGR 143
>MGI|MGI:1330294 [details] [associations]
symbol:Hnrnpab "heterogeneous nuclear ribonucleoprotein A/B"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001837 "epithelial to mesenchymal transition"
evidence=IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003688 "DNA
replication origin binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 MGI:MGI:1330294 GO:GO:0005634
GO:GO:0005737 GO:GO:0045893 GO:GO:0000166 GO:GO:0003677
Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0003723 GO:GO:0030529
GO:GO:0001837 UniGene:Mm.490267 eggNOG:COG0724 HOGENOM:HOG000234441
HOVERGEN:HBG002295 GeneTree:ENSGT00700000104347 KO:K13044
InterPro:IPR012956 Pfam:PF08143 CTD:3182 OrthoDB:EOG42BX9K
ChiTaRS:HNRNPAB EMBL:D90151 EMBL:L36663 EMBL:AK076132
IPI:IPI00117288 PIR:JQ0448 RefSeq:NP_034578.1 UniGene:Mm.280842
ProteinModelPortal:Q99020 SMR:Q99020 DIP:DIP-31415N IntAct:Q99020
MINT:MINT-4132837 STRING:Q99020 PhosphoSite:Q99020 PaxDb:Q99020
PRIDE:Q99020 Ensembl:ENSMUST00000074669 GeneID:15384 KEGG:mmu:15384
NextBio:288056 Bgee:Q99020 Genevestigator:Q99020
GermOnline:ENSMUSG00000020358 Uniprot:Q99020
Length = 285
Score = 102 (41.0 bits), Expect = 0.00010, P = 0.00010
Identities = 30/91 (32%), Positives = 47/91 (51%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV----GKGCGFVQFANSLGQIMAINGVGH 113
IFVGGL+P T+E +R+ F Q+GEI ++++P+ K GFV F + + V
Sbjct: 161 IFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFV-FITFKEE----DPVKK 215
Query: 114 TMEGKFMMVMGMLFRHQMTQACTLQQLRPMG 144
+E KF V G ++ Q + Q + G
Sbjct: 216 VLEKKFHTVSGSKCEIKVAQPKEVYQQQQYG 246
>UNIPROTKB|C1JGV6 [details] [associations]
symbol:BOLL "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045948 "positive regulation of translational
initiation" evidence=IEA] [GO:0008494 "translation activator
activity" evidence=IEA] [GO:0007126 "meiosis" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0007126
GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0008494
GO:GO:0045948 GeneTree:ENSGT00530000063480 OMA:YQAPAQC
EMBL:DAAA02005516 EMBL:DAAA02005517 EMBL:DAAA02005518 EMBL:FJ623266
IPI:IPI00867153 UniGene:Bt.25777 Ensembl:ENSBTAT00000044801
Uniprot:C1JGV6
Length = 295
Score = 102 (41.0 bits), Expect = 0.00011, P = 0.00011
Identities = 24/46 (52%), Positives = 28/46 (60%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQF 98
IFVGG+D + DLR+ FSQYG + VKI V KG GFV F
Sbjct: 47 IFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTF 92
>UNIPROTKB|F1P6I8 [details] [associations]
symbol:BOLL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045948 "positive regulation of translational
initiation" evidence=IEA] [GO:0008494 "translation activator
activity" evidence=IEA] [GO:0007126 "meiosis" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0007126
GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0008494
GO:GO:0045948 GeneTree:ENSGT00530000063480 OMA:YQAPAQC
EMBL:AAEX03017986 Ensembl:ENSCAFT00000037605 Uniprot:F1P6I8
Length = 295
Score = 102 (41.0 bits), Expect = 0.00011, P = 0.00011
Identities = 24/46 (52%), Positives = 28/46 (60%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQF 98
IFVGG+D + DLR+ FSQYG + VKI V KG GFV F
Sbjct: 47 IFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTF 92
>UNIPROTKB|F1SI86 [details] [associations]
symbol:BOLL "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045948 "positive regulation of translational
initiation" evidence=IEA] [GO:0008494 "translation activator
activity" evidence=IEA] [GO:0007126 "meiosis" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0007126
GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0008494
GO:GO:0045948 GeneTree:ENSGT00530000063480 OMA:YQAPAQC
EMBL:CU469305 Ensembl:ENSSSCT00000017510 Uniprot:F1SI86
Length = 295
Score = 102 (41.0 bits), Expect = 0.00011, P = 0.00011
Identities = 24/46 (52%), Positives = 28/46 (60%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQF 98
IFVGG+D + DLR+ FSQYG + VKI V KG GFV F
Sbjct: 47 IFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTF 92
>RGD|69255 [details] [associations]
symbol:Hnrnpab "heterogeneous nuclear ribonucleoprotein A/B"
species:10116 "Rattus norvegicus" [GO:0001837 "epithelial to
mesenchymal transition" evidence=ISO] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003688 "DNA replication origin binding"
evidence=IDA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=ISO] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:69255 GO:GO:0045892 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003688 HOVERGEN:HBG002295 HSSP:Q14103 InterPro:IPR012956
Pfam:PF08143 PIR:PC4375 PIR:PC4376 PIR:PC4377 UniGene:Rn.1427
UniGene:Rn.217734 EMBL:AF108653 IPI:IPI00208193
ProteinModelPortal:Q9Z0U8 SMR:Q9Z0U8 IntAct:Q9Z0U8 MINT:MINT-7138483
STRING:Q9Z0U8 PRIDE:Q9Z0U8 UCSC:RGD:69255 Genevestigator:Q9Z0U8
Uniprot:Q9Z0U8
Length = 298
Score = 102 (41.0 bits), Expect = 0.00011, P = 0.00011
Identities = 30/91 (32%), Positives = 47/91 (51%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV----GKGCGFVQFANSLGQIMAINGVGH 113
IFVGGL+P T+E +R+ F Q+GEI ++++P+ K GFV F + + V
Sbjct: 174 IFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFV-FITFKEE----DPVKK 228
Query: 114 TMEGKFMMVMGMLFRHQMTQACTLQQLRPMG 144
+E KF V G ++ Q + Q + G
Sbjct: 229 VLEKKFHTVSGSKCEIKVAQPKEVYQQQQYG 259
>TAIR|locus:2179939 [details] [associations]
symbol:AtRZ-1c "AtRZ-1c" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA;IDA] [GO:0003723
"RNA binding" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0009409 "response to cold"
evidence=IGI;IEP] [GO:0009414 "response to water deprivation"
evidence=IEP] [GO:0009651 "response to salt stress" evidence=IEP]
InterPro:IPR000504 InterPro:IPR001878 InterPro:IPR012677
Pfam:PF00076 Pfam:PF00098 PROSITE:PS50102 PROSITE:PS50158
SMART:SM00343 SMART:SM00360 EMBL:CP002688 GO:GO:0005730
GO:GO:0000166 GO:GO:0046872 GO:GO:0009409 GO:GO:0009414
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676 Gene3D:4.10.60.10
SUPFAM:SSF57756 HOGENOM:HOG000276232 HSSP:Q14103 KO:K12885
ProtClustDB:CLSN2718554 EMBL:AY092975 EMBL:AY114645 IPI:IPI00520891
RefSeq:NP_196048.1 UniGene:At.33149 ProteinModelPortal:Q8RWN5
SMR:Q8RWN5 IntAct:Q8RWN5 STRING:Q8RWN5 PRIDE:Q8RWN5
EnsemblPlants:AT5G04280.1 GeneID:830307 KEGG:ath:AT5G04280
TAIR:At5g04280 InParanoid:Q8RWN5 OMA:ESIREMH PhylomeDB:Q8RWN5
ArrayExpress:Q8RWN5 Genevestigator:Q8RWN5 Uniprot:Q8RWN5
Length = 310
Score = 102 (41.0 bits), Expect = 0.00012, P = 0.00012
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFAN 100
IFVGGL P VTD DL + FS++G+I +I + +G GF+ FA+
Sbjct: 9 IFVGGLSPEVTDRDLERAFSRFGDILDCQIMLERDTGRSRGFGFITFAD 57
>UNIPROTKB|Q9QX81 [details] [associations]
symbol:Hnrnpab "RCG34663, isoform CRA_a" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0001837 "epithelial to mesenchymal transition" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0043565
"sequence-specific DNA binding" evidence=ISS] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:69255 GO:GO:0005634 GO:GO:0005737 GO:GO:0045893 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529 GO:GO:0001837
EMBL:CH473948 HOGENOM:HOG000234441 HOVERGEN:HBG002295 HSSP:Q14103
GeneTree:ENSGT00700000104347 KO:K13044 InterPro:IPR012956
Pfam:PF08143 OMA:FILFKDP OrthoDB:EOG42BX9K EMBL:AC105470 PIR:PC4375
PIR:PC4376 PIR:PC4377 UniGene:Rn.1427 UniGene:Rn.217734
GeneID:100910156 KEGG:rno:100910156 EMBL:AJ238854 IPI:IPI00212724
RefSeq:XP_003750865.1 SMR:Q9QX81 STRING:Q9QX81
Ensembl:ENSRNOT00000004885 InParanoid:Q9QX81 Genevestigator:Q9QX81
Uniprot:Q9QX81
Length = 332
Score = 102 (41.0 bits), Expect = 0.00013, P = 0.00013
Identities = 30/91 (32%), Positives = 47/91 (51%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV----GKGCGFVQFANSLGQIMAINGVGH 113
IFVGGL+P T+E +R+ F Q+GEI ++++P+ K GFV F + + V
Sbjct: 161 IFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFV-FITFKEE----DPVKK 215
Query: 114 TMEGKFMMVMGMLFRHQMTQACTLQQLRPMG 144
+E KF V G ++ Q + Q + G
Sbjct: 216 VLEKKFHTVSGSKCEIKVAQPKEVYQQQQYG 246
Score = 99 (39.9 bits), Expect = 0.00084, P = 0.00084
Identities = 28/109 (25%), Positives = 48/109 (44%)
Query: 17 GAATPRKXXXXXXXXXXXXXXASNGAPG-QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQP 75
GAA P NGA G Q S+ + +FVGGL + + +DL+
Sbjct: 35 GAAAPATPAGSGGGTTAAPSGNQNGAEGDQINASKNEEDAGKMFVGGLSWDTSKKDLKDY 94
Query: 76 FSQYGEIASVKIPV------GKGCGFVQFANSLGQIMAINGVGHTMEGK 118
F+++GE+ I + +G GF+ F +S ++ H ++G+
Sbjct: 95 FTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQKEHRLDGR 143
>UNIPROTKB|Q28IQ9 [details] [associations]
symbol:cirbp "Cold-inducible RNA-binding protein"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0003729 "mRNA
binding" evidence=ISS] [GO:0003730 "mRNA 3'-UTR binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0007369 "gastrulation" evidence=ISS]
[GO:0009409 "response to cold" evidence=ISS] [GO:0009790 "embryo
development" evidence=ISS] [GO:0016477 "cell migration"
evidence=ISS] [GO:0019899 "enzyme binding" evidence=ISS]
[GO:0022008 "neurogenesis" evidence=ISS] [GO:0045727 "positive
regulation of translation" evidence=ISS] [GO:0048255 "mRNA
stabilization" evidence=ISS] [GO:0048793 "pronephros development"
evidence=ISS] [GO:0060212 "negative regulation of
nuclear-transcribed mRNA poly(A) tail shortening" evidence=ISS]
[GO:0005840 "ribosome" evidence=ISS] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0005737 GO:GO:0005654 GO:GO:0016477
GO:GO:0022008 GO:GO:0000166 GO:GO:0009409 Gene3D:3.30.70.330
GO:GO:0019899 GO:GO:0048255 GO:GO:0003730 GO:GO:0045727
GO:GO:0007369 eggNOG:COG0724 GO:GO:0048793 HOVERGEN:HBG107480
GO:GO:0060212 KO:K13195 CTD:1153 HOGENOM:HOG000276232 EMBL:CR760272
RefSeq:NP_001017228.1 UniGene:Str.47654 ProteinModelPortal:Q28IQ9
SMR:Q28IQ9 STRING:Q28IQ9 GeneID:549982 KEGG:xtr:549982
Xenbase:XB-GENE-492781 Uniprot:Q28IQ9
Length = 166
Score = 99 (39.9 bits), Expect = 0.00013, P = 0.00013
Identities = 27/74 (36%), Positives = 43/74 (58%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFAN---SLGQIMAI 108
+FVGGL+ T+E L Q FS+YG++A V + +G GFV F N + +MA+
Sbjct: 8 LFVGGLNFETTEESLEQVFSKYGQVAEVVVVKDRESKRSRGFGFVTFENPEDAKDAMMAM 67
Query: 109 NGVGHTMEGKFMMV 122
NG +++G+ + V
Sbjct: 68 NG--KSVDGRQIRV 79
>UNIPROTKB|F2Z2G3 [details] [associations]
symbol:BOLL "Protein boule-like" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC011997
HGNC:HGNC:14273 IPI:IPI01018166 ProteinModelPortal:F2Z2G3
SMR:F2Z2G3 Ensembl:ENST00000430004 OMA:YQAPAQC ArrayExpress:F2Z2G3
Bgee:F2Z2G3 Uniprot:F2Z2G3
Length = 333
Score = 102 (41.0 bits), Expect = 0.00013, P = 0.00013
Identities = 24/46 (52%), Positives = 28/46 (60%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQF 98
IFVGG+D + DLR+ FSQYG + VKI V KG GFV F
Sbjct: 35 IFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTF 80
>FB|FBgn0085391 [details] [associations]
symbol:CG34362 species:7227 "Drosophila melanogaster"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0000381 "regulation of
alternative mRNA splicing, via spliceosome" evidence=IMP]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 EMBL:AE014297 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0000381 GeneTree:ENSGT00680000099967
RefSeq:NP_001163754.1 UniGene:Dm.13924 ProteinModelPortal:E1JIZ9
SMR:E1JIZ9 EnsemblMetazoa:FBtr0301397 GeneID:43362
KEGG:dme:Dmel_CG34362 FlyBase:FBgn0085391 GenomeRNAi:43362
NextBio:833552 Bgee:E1JIZ9 Uniprot:E1JIZ9
Length = 800
Score = 104 (41.7 bits), Expect = 0.00014, P = 0.00014
Identities = 35/117 (29%), Positives = 54/117 (46%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKXXXXXXXXXXXXXXASNGAPGQGPQSEGDSSNTTIFV 60
+T MNG + SR +R AT + N QS SN T++V
Sbjct: 519 ITAMNGQWLGSRSIRTNWATRKPPASKENIKPLTFDEVYN-------QSS--PSNCTVYV 569
Query: 61 GGLDPNVT---DEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHT 114
GG++ +T +E L++ F+ YG I +++ KG FV+F+ AI GV +T
Sbjct: 570 GGVNSALTALSEEVLQKTFAPYGAIQEIRVFKDKGYAFVRFSTKEAATHAIVGVHNT 626
>TAIR|locus:2199700 [details] [associations]
symbol:PAB3 "poly(A) binding protein 3" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0006397
"mRNA processing" evidence=IGI] InterPro:IPR000504
InterPro:IPR002004 InterPro:IPR006515 InterPro:IPR012677
Pfam:PF00076 Pfam:PF00658 PROSITE:PS50102 PROSITE:PS51309
SMART:SM00360 SMART:SM00517 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723
eggNOG:COG0724 KO:K13126 Gene3D:1.10.1900.10 SUPFAM:SSF63570
TIGRFAMs:TIGR01628 HOGENOM:HOG000217922 EMBL:AC003979 EMBL:Y12227
EMBL:AF293840 EMBL:AY054490 IPI:IPI00543342 PIR:T00768
RefSeq:NP_173690.1 UniGene:At.208 ProteinModelPortal:O64380
SMR:O64380 PaxDb:O64380 PRIDE:O64380 EnsemblPlants:AT1G22760.1
GeneID:838882 KEGG:ath:AT1G22760 TAIR:At1g22760 InParanoid:O64380
OMA:SSISHQK PhylomeDB:O64380 ProtClustDB:CLSN2679283
Genevestigator:O64380 GermOnline:AT1G22760 Uniprot:O64380
Length = 660
Score = 103 (41.3 bits), Expect = 0.00014, P = 0.00014
Identities = 28/93 (30%), Positives = 50/93 (53%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVG--KGCGFVQFANSLGQIMA 107
S +++ LD +V DE L++ FS+YG + S K+ P G +G GFV ++N + A
Sbjct: 329 SQGANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEEALRA 388
Query: 108 INGVGHTMEGKFMMVMGMLFRHQMTQACTLQQL 140
++ + M G+ + + + R + +A LQ L
Sbjct: 389 LSEMNGKMIGRKPLYIALAQRKEDRRA-HLQAL 420
>ZFIN|ZDB-GENE-070912-400 [details] [associations]
symbol:u2surp "U2 snRNP-associated SURP domain
containing" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006396 "RNA
processing" evidence=IEA] InterPro:IPR000061 InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 Pfam:PF01805 PROSITE:PS50102
PROSITE:PS50128 SMART:SM00360 SMART:SM00648
ZFIN:ZDB-GENE-070912-400 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003723 GO:GO:0006396 InterPro:IPR008942 SUPFAM:SSF48464
InterPro:IPR006569 SMART:SM00582 SUPFAM:SSF109905 PROSITE:PS51391
InterPro:IPR013170 Pfam:PF08312 EMBL:BX248497 eggNOG:NOG307351
HOGENOM:HOG000286037 HOVERGEN:HBG093996 OMA:SILQANS
OrthoDB:EOG47SSD9 GeneTree:ENSGT00390000010687 IPI:IPI00613709
UniGene:Dr.75427 Ensembl:ENSDART00000132651 Uniprot:B0S5J3
Length = 923
Score = 104 (41.7 bits), Expect = 0.00016, P = 0.00016
Identities = 30/94 (31%), Positives = 45/94 (47%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI--PVG------- 90
+ APG GD + T +++G ++P + +E L Q F +YG +ASVKI P
Sbjct: 194 DSAPGS--HDVGDPTTTNLYLGNINPQMNEEMLCQEFGRYGPLASVKIMWPRTDEERARE 251
Query: 91 KGCGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
+ CGFV F A+ + M F M +G
Sbjct: 252 RNCGFVAFMTRRDAERALKHLNGKMIMNFEMKLG 285
>ZFIN|ZDB-GENE-030131-3902 [details] [associations]
symbol:rbm4.1 "RNA binding motif protein 4.1"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR001878 InterPro:IPR012677 Pfam:PF00076 Pfam:PF00098
PROSITE:PS50102 PROSITE:PS50158 SMART:SM00343 SMART:SM00360
ZFIN:ZDB-GENE-030131-3902 GO:GO:0005634 GO:GO:0000166 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003723 Gene3D:4.10.60.10
eggNOG:NOG294108 GeneTree:ENSGT00390000020883 KO:K13187
EMBL:BC046057 EMBL:BC071513 IPI:IPI00501593 RefSeq:NP_955999.1
UniGene:Dr.132298 ProteinModelPortal:Q6IQ97 SMR:Q6IQ97 PRIDE:Q6IQ97
Ensembl:ENSDART00000052862 GeneID:573001 KEGG:dre:573001 CTD:573001
HOGENOM:HOG000026790 HOVERGEN:HBG062217 InParanoid:Q6IQ97
OMA:PYEERDP OrthoDB:EOG4NP74W NextBio:20891027 ArrayExpress:Q6IQ97
Bgee:Q6IQ97 Uniprot:Q6IQ97
Length = 419
Score = 102 (41.0 bits), Expect = 0.00019, P = 0.00019
Identities = 35/94 (37%), Positives = 45/94 (47%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTM-E 116
IFVG L PN T E++R FSQYG+I+ I K GFV + AI + H M
Sbjct: 4 IFVGNLSPNTTAEEIRSLFSQYGKISECDIV--KNFGFVHMDSKSEADEAIQNLHHYMLN 61
Query: 117 GKFM---MVMGM------LFRHQMTQACTLQQLR 141
G M M G L ++ +CT Q+LR
Sbjct: 62 GMAMNVEMSKGKPKTSTKLHVGNISSSCTNQELR 95
>UNIPROTKB|H7BY49 [details] [associations]
symbol:TIA1 "Nucleolysin TIA-1 isoform p40" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC016700
HGNC:HGNC:11802 ChiTaRS:TIA1 Ensembl:ENST00000361692 Uniprot:H7BY49
Length = 152
Score = 97 (39.2 bits), Expect = 0.00021, P = 0.00021
Identities = 23/67 (34%), Positives = 35/67 (52%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI----PVGK--GC 93
N A Q + S++ +FVG L P +T ED++ F+ +G I+ ++ GK G
Sbjct: 71 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGY 130
Query: 94 GFVQFAN 100
GFV F N
Sbjct: 131 GFVSFFN 137
>DICTYBASE|DDB_G0276725 [details] [associations]
symbol:DDB_G0276725 "putative RNA-binding protein"
species:44689 "Dictyostelium discoideum" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 dictyBase:DDB_G0276725 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AAFI02000019 eggNOG:COG0724
RefSeq:XP_643007.1 ProteinModelPortal:Q550X7
EnsemblProtists:DDB0202911 GeneID:8620667 KEGG:ddi:DDB_G0276725
InParanoid:Q550X7 Uniprot:Q550X7
Length = 78
Score = 90 (36.7 bits), Expect = 0.00021, P = 0.00021
Identities = 23/72 (31%), Positives = 39/72 (54%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANSLGQIMAIN 109
T+I+VGGL+ +++ E L+ FS YGEI S+ GK G ++++ N + AI+
Sbjct: 4 TSIYVGGLNSHISKEILKTKFSVYGEIQSLVFVKGKETGISEGYAYIEYNNKEDAVKAID 63
Query: 110 GVG-HTMEGKFM 120
+ EG +
Sbjct: 64 DLNDQPFEGNHL 75
>UNIPROTKB|K7EJV5 [details] [associations]
symbol:CIRBP "Cold-inducible RNA-binding protein"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 Gene3D:3.30.70.330 EMBL:AC004221 EMBL:AC004258
HGNC:HGNC:1982 Ensembl:ENST00000588411 Uniprot:K7EJV5
Length = 105
Score = 90 (36.7 bits), Expect = 0.00021, P = 0.00021
Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFAN---SLG 103
S +FVGGL + ++ L Q FS+YG+I+ V + +G GFV F N +
Sbjct: 3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62
Query: 104 QIMAINGVGHTMEGKFMMV 122
+MA+NG +++G+ + V
Sbjct: 63 AMMAMNG--KSVDGRQIRV 79
>UNIPROTKB|K7ENX8 [details] [associations]
symbol:CIRBP "Cold-inducible RNA-binding protein"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 Gene3D:3.30.70.330 EMBL:AC004221 EMBL:AC004258
HGNC:HGNC:1982 Ensembl:ENST00000589266 Uniprot:K7ENX8
Length = 89
Score = 90 (36.7 bits), Expect = 0.00021, P = 0.00021
Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFAN---SLG 103
S +FVGGL + ++ L Q FS+YG+I+ V + +G GFV F N +
Sbjct: 3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62
Query: 104 QIMAINGVGHTMEGKFMMV 122
+MA+NG +++G+ + V
Sbjct: 63 AMMAMNG--KSVDGRQIRV 79
>UNIPROTKB|F6W1U9 [details] [associations]
symbol:RBMS2 "RNA-binding motif,
single-stranded-interacting protein 2" species:9606 "Homo sapiens"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC090681 HGNC:HGNC:9909
EMBL:AC097104 IPI:IPI01022449 ProteinModelPortal:F6W1U9 SMR:F6W1U9
Ensembl:ENST00000545007 ArrayExpress:F6W1U9 Bgee:F6W1U9
Uniprot:F6W1U9
Length = 147
Score = 96 (38.9 bits), Expect = 0.00024, P = 0.00024
Identities = 25/68 (36%), Positives = 33/68 (48%)
Query: 39 SNGAPGQGPQSEGDS--SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK----- 91
SN P S G+ S T +++ GL P TD+DL + YG+I S K + K
Sbjct: 37 SNSTPNSSSGSNGNDQLSKTNLYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKC 96
Query: 92 -GCGFVQF 98
G GFV F
Sbjct: 97 KGYGFVDF 104
>UNIPROTKB|D4A7H4 [details] [associations]
symbol:Tia1 "Protein Tia1" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:1305742 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
IPI:IPI00214634 ProteinModelPortal:D4A7H4
Ensembl:ENSRNOT00000023323 Uniprot:D4A7H4
Length = 281
Score = 101 (40.6 bits), Expect = 0.00025, P = 0.00025
Identities = 26/79 (32%), Positives = 39/79 (49%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI----PVGK--GC 93
N A Q + S++ +FVG L P +T ED++ F+ +G I+ ++ GK G
Sbjct: 75 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGY 134
Query: 94 GFVQFANSLGQIMAINGVG 112
GFV F N AI +G
Sbjct: 135 GFVSFFNKWDAENAIQQMG 153
>UNIPROTKB|C9JTN7 [details] [associations]
symbol:TIA1 "Nucleolysin TIA-1 isoform p40" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 HOGENOM:HOG000206748
EMBL:AC016700 HGNC:HGNC:11802 ChiTaRS:TIA1 IPI:IPI00927286
ProteinModelPortal:C9JTN7 SMR:C9JTN7 STRING:C9JTN7
Ensembl:ENST00000445587 ArrayExpress:C9JTN7 Bgee:C9JTN7
Uniprot:C9JTN7
Length = 285
Score = 101 (40.6 bits), Expect = 0.00026, P = 0.00026
Identities = 26/79 (32%), Positives = 39/79 (49%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI----PVGK--GC 93
N A Q + S++ +FVG L P +T ED++ F+ +G I+ ++ GK G
Sbjct: 79 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGY 138
Query: 94 GFVQFANSLGQIMAINGVG 112
GFV F N AI +G
Sbjct: 139 GFVSFFNKWDAENAIQQMG 157
>TAIR|locus:2049721 [details] [associations]
symbol:AT2G37220 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0009535 "chloroplast thylakoid membrane" evidence=IDA]
[GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0009409
"response to cold" evidence=IEP;RCA] [GO:0010319 "stromule"
evidence=IDA] [GO:0045087 "innate immune response" evidence=IDA]
[GO:0008266 "poly(U) RNA binding" evidence=IDA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP] [GO:0009534
"chloroplast thylakoid" evidence=IDA] [GO:0009697 "salicylic acid
biosynthetic process" evidence=RCA] [GO:0009814 "defense response,
incompatible interaction" evidence=RCA] [GO:0019684
"photosynthesis, light reaction" evidence=RCA] [GO:0042742 "defense
response to bacterium" evidence=RCA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0009737 GO:GO:0009570 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0008266 GO:GO:0000166 GO:GO:0009409 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0045087 GO:GO:0009941 EMBL:AC005896
GO:GO:0030529 GO:GO:0009535 GO:GO:0010319 eggNOG:COG0724
HOGENOM:HOG000276232 EMBL:AC006260 KO:K11294 EMBL:AF370167
EMBL:AY048251 EMBL:AY059129 IPI:IPI00540246 PIR:A84790
RefSeq:NP_181259.1 UniGene:At.25300 ProteinModelPortal:Q9ZUU4
SMR:Q9ZUU4 IntAct:Q9ZUU4 STRING:Q9ZUU4 SWISS-2DPAGE:Q9ZUU4
PaxDb:Q9ZUU4 PRIDE:Q9ZUU4 ProMEX:Q9ZUU4 EnsemblPlants:AT2G37220.1
GeneID:818299 KEGG:ath:AT2G37220 GeneFarm:4058 TAIR:At2g37220
InParanoid:Q9ZUU4 OMA:PFNVDSA PhylomeDB:Q9ZUU4
ProtClustDB:CLSN2684922 Genevestigator:Q9ZUU4 GermOnline:AT2G37220
Uniprot:Q9ZUU4
Length = 289
Score = 101 (40.6 bits), Expect = 0.00027, P = 0.00027
Identities = 32/127 (25%), Positives = 51/127 (40%)
Query: 3 EMNGVYCSSRPMRIGAATPRKXXXXXXXXXXXXXXASNGAPGQGPQSEGDSSNTTIFVGG 62
+ NG RP+R+ A P S+G+ G G S ++VG
Sbjct: 151 QFNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSSGSGYGGGGGSGAGSGNRVYVGN 210
Query: 63 LDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANSLGQIMAINGV-GHTM 115
L V D L FS+ G++ ++ KG GFV + +S AI + G +
Sbjct: 211 LSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGADL 270
Query: 116 EGKFMMV 122
+G+ + V
Sbjct: 271 DGRQIRV 277
>UNIPROTKB|K7ELV6 [details] [associations]
symbol:CIRBP "Cold-inducible RNA-binding protein"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 Gene3D:3.30.70.330 EMBL:AC004221 EMBL:AC004258
HGNC:HGNC:1982 Ensembl:ENST00000588344 Uniprot:K7ELV6
Length = 70
Score = 89 (36.4 bits), Expect = 0.00027, P = 0.00027
Identities = 24/67 (35%), Positives = 36/67 (53%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFAN---SLG 103
S +FVGGL + ++ L Q FS+YG+I+ V + +G GFV F N +
Sbjct: 3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62
Query: 104 QIMAING 110
+MA+NG
Sbjct: 63 AMMAMNG 69
>UNIPROTKB|Q60A61 [details] [associations]
symbol:MCA1010 "RNA-binding protein" species:243233
"Methylococcus capsulatus str. Bath" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AE017282
GenomeReviews:AE017282_GR HOGENOM:HOG000276232 RefSeq:YP_113486.1
ProteinModelPortal:Q60A61 GeneID:3102652 KEGG:mca:MCA1010
PATRIC:22605822 OMA:LAFHSTE Uniprot:Q60A61
Length = 95
Score = 89 (36.4 bits), Expect = 0.00027, P = 0.00027
Identities = 23/72 (31%), Positives = 39/72 (54%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANSLGQIMAINGV 111
++VG L+ V D DL + F+ YG + S ++ + +G GFV+ + AI G+
Sbjct: 5 LYVGNLNYRVGDADLERTFAAYGTVKSAQVVMDRATGRSRGFGFVEMGSDQEAQAAIAGL 64
Query: 112 -GHTMEGKFMMV 122
G M+G+ +MV
Sbjct: 65 NGKEMDGRNLMV 76
>TAIR|locus:2119505 [details] [associations]
symbol:AT4G13860 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 HSSP:P19339 HOGENOM:HOG000276232
UniGene:At.33330 EMBL:BT014844 IPI:IPI00523584 RefSeq:NP_193122.2
ProteinModelPortal:Q6ID29 SMR:Q6ID29 PRIDE:Q6ID29
EnsemblPlants:AT4G13860.1 GeneID:827020 KEGG:ath:AT4G13860
TAIR:At4g13860 InParanoid:Q6ID29 OMA:KIEEMFL PhylomeDB:Q6ID29
Genevestigator:Q6ID29 Uniprot:Q6ID29
Length = 87
Score = 89 (36.4 bits), Expect = 0.00027, P = 0.00027
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANSLGQIMAIN 109
T ++VG L P TD+ LR+ FS YG + + +G GFV +++ A++
Sbjct: 3 TRVYVGNLSPTTTDDMLREAFSGYGNVVDAIVMRDRYTDRSRGFGFVTYSSHSEAEAAVS 62
Query: 110 GV-GHTMEGKFMMV 122
G+ G + G+ + V
Sbjct: 63 GMDGKELNGRRVSV 76
>UNIPROTKB|J3KQA8 [details] [associations]
symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:AC078778 HGNC:HGNC:5031 ChiTaRS:HNRNPA1
ProteinModelPortal:J3KQA8 Ensembl:ENST00000420780 Uniprot:J3KQA8
Length = 102
Score = 88 (36.0 bits), Expect = 0.00035, P = 0.00035
Identities = 25/77 (32%), Positives = 39/77 (50%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGK---GCGFVQFANSLGQIMAINGV 111
+F+GGL TDE LR F Q+G + + P K G GFV +A A+N
Sbjct: 16 LFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNAR 75
Query: 112 GHTMEGKFM---MVMGM 125
H ++G+ + M++G+
Sbjct: 76 PHKVDGRVVEATMILGI 92
>UNIPROTKB|J3QKT5 [details] [associations]
symbol:MSI2 "RNA-binding protein Musashi homolog 2"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
HGNC:HGNC:18585 ChiTaRS:MSI2 EMBL:AC005325 EMBL:AC007431
EMBL:AC015883 EMBL:AC091181 ProteinModelPortal:J3QKT5
Ensembl:ENST00000581776 Uniprot:J3QKT5
Length = 99
Score = 88 (36.0 bits), Expect = 0.00035, P = 0.00035
Identities = 26/86 (30%), Positives = 38/86 (44%)
Query: 39 SNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGK---G 92
S G G S+ D +F+GGL + + LR FS++GEI + P K G
Sbjct: 6 SQGTSGSANDSQHDPGK--MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRG 63
Query: 93 CGFVQFANSLGQIMAINGVGHTMEGK 118
GFV FA+ + H ++ K
Sbjct: 64 FGFVTFADPASVDKVLGQPHHELDSK 89
>UNIPROTKB|A5GFN7 [details] [associations]
symbol:RNPC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:COG0724
HOGENOM:HOG000276232 EMBL:CR956362 HOVERGEN:HBG108399
GeneTree:ENSGT00390000002308 UniGene:Ssc.29738
ProteinModelPortal:A5GFN7 STRING:A5GFN7 Ensembl:ENSSSCT00000033672
ArrayExpress:A5GFN7 Uniprot:A5GFN7
Length = 193
Score = 98 (39.6 bits), Expect = 0.00044, P = 0.00044
Identities = 37/112 (33%), Positives = 51/112 (45%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI----PVGK--GCGF 95
APG S+ D++ T IFVGGL + TD LR+ F +G+I + GK G GF
Sbjct: 20 APGAMHGSQKDTTFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGF 79
Query: 96 VQFANSLGQIMAINGVGHTMEGKFMMV----MGMLFRHQMTQ-ACTLQQLRP 142
V A+ A ++G+ V +G R T A +QQL P
Sbjct: 80 VTMADRAAAERACKDPNPNIDGRKANVNLAYLGAKPRSLQTGFAIGVQQLHP 131
>FB|FBgn0064117 [details] [associations]
symbol:CG33714 species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
EMBL:AE014298 GO:GO:0003729 Gene3D:3.30.70.330
GeneTree:ENSGT00390000008624 RefSeq:NP_001027083.1
RefSeq:NP_001027084.1 UniGene:Dm.234 SMR:Q0KHQ1 STRING:Q0KHQ1
EnsemblMetazoa:FBtr0091703 EnsemblMetazoa:FBtr0091704
GeneID:3772560 KEGG:dme:Dmel_CG33714 UCSC:CG33714-RA
FlyBase:FBgn0064117 InParanoid:Q0KHQ1 OMA:GHRELRN OrthoDB:EOG4X0K91
NextBio:854180 Uniprot:Q0KHQ1
Length = 90
Score = 87 (35.7 bits), Expect = 0.00045, P = 0.00045
Identities = 26/72 (36%), Positives = 37/72 (51%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK--GC----GFVQFANSLGQIMAI-NG 110
IFVG L V ++LR F ++G + S + K GC GFV F NSL + I N
Sbjct: 17 IFVGNLPWTVGHQELRGYFREFGRVVSANVIFDKRTGCSKGYGFVSF-NSLTALEKIENE 75
Query: 111 VGHTMEGKFMMV 122
H +EG ++ +
Sbjct: 76 QKHILEGNYLNI 87
>UNIPROTKB|D6RF44 [details] [associations]
symbol:HNRNPD "Heterogeneous nuclear ribonucleoprotein D0"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0043488 "regulation of mRNA stability" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005829 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0048255 HOGENOM:HOG000234441 EMBL:AC124016
HGNC:HGNC:5036 ChiTaRS:HNRNPD IPI:IPI00967562
ProteinModelPortal:D6RF44 SMR:D6RF44 Ensembl:ENST00000515432
ArrayExpress:D6RF44 Bgee:D6RF44 Uniprot:D6RF44
Length = 112
Score = 87 (35.7 bits), Expect = 0.00045, P = 0.00045
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIA--SVKI-PV---GKGCGFVQFANSLGQIMAINGV 111
+F+GGL + T +DL+ FS++GE+ ++K+ P+ +G GFV F S ++
Sbjct: 1 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQK 60
Query: 112 GHTMEGK 118
H + GK
Sbjct: 61 EHKLNGK 67
>UNIPROTKB|F8WD91 [details] [associations]
symbol:BOLL "Protein boule-like" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC011997 HGNC:HGNC:14273
IPI:IPI00917092 ProteinModelPortal:F8WD91 SMR:F8WD91
Ensembl:ENST00000434976 ArrayExpress:F8WD91 Bgee:F8WD91
Uniprot:F8WD91
Length = 87
Score = 87 (35.7 bits), Expect = 0.00045, P = 0.00045
Identities = 17/30 (56%), Positives = 21/30 (70%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKI 87
IFVGG+D + DLR+ FSQYG + VKI
Sbjct: 47 IFVGGIDFKTNESDLRKFFSQYGSVKEVKI 76
>UNIPROTKB|B4DTC3 [details] [associations]
symbol:HNRNPD "cDNA FLJ54150, highly similar to
Heterogeneous nuclear ribonucleoprotein D0" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0030529 HOGENOM:HOG000234441 HOVERGEN:HBG002295 EMBL:AC124016
UniGene:Hs.480073 HGNC:HGNC:5036 ChiTaRS:HNRNPD InterPro:IPR012956
Pfam:PF08143 EMBL:AK300149 IPI:IPI01014602 SMR:B4DTC3 STRING:B4DTC3
Ensembl:ENST00000543098 Uniprot:B4DTC3
Length = 303
Score = 100 (40.3 bits), Expect = 0.00047, P = 0.00047
Identities = 31/95 (32%), Positives = 49/95 (51%)
Query: 38 ASNGAPGQGPQSEG---DSSNTT-----IFVGGLDPNVTDEDLRQPFSQYGEIA--SVKI 87
AS G G +SEG D+S +F+GGL + T +DL+ FS++GE+ ++K+
Sbjct: 19 ASGGTEGGSAESEGAKIDASKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKL 78
Query: 88 -PV---GKGCGFVQFANSLGQIMAINGVGHTMEGK 118
P+ +G GFV F S ++ H + GK
Sbjct: 79 DPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGK 113
>TAIR|locus:2018794 [details] [associations]
symbol:UBP1B "oligouridylate binding protein 1B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003730 "mRNA 3'-UTR binding" evidence=ISS]
[GO:0005829 "cytosol" evidence=RCA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC007843 HSSP:P33240
HOGENOM:HOG000206748 KO:K13201 OMA:NGSKQLR ProtClustDB:CLSN2682164
EMBL:AY085705 EMBL:BT026477 IPI:IPI00543090 RefSeq:NP_564018.1
UniGene:At.43816 ProteinModelPortal:Q9LQI9 SMR:Q9LQI9 STRING:Q9LQI9
PRIDE:Q9LQI9 EnsemblPlants:AT1G17370.1 GeneID:838309
KEGG:ath:AT1G17370 TAIR:At1g17370 InParanoid:Q9LQI9
PhylomeDB:Q9LQI9 Genevestigator:Q9LQI9 Uniprot:Q9LQI9
Length = 419
Score = 101 (40.6 bits), Expect = 0.00049, P = 0.00049
Identities = 25/73 (34%), Positives = 41/73 (56%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE--IASVKIPVGKGCGFVQFANS 101
G+ P E ++ TT++VG L P V+ DL + F G I V++ KG GFV+++
Sbjct: 250 GEAP--ENNAQYTTVYVGNLAPEVSQVDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTH 307
Query: 102 LGQIMAINGVGHT 114
+ +AI +G+T
Sbjct: 308 VEAALAIQ-MGNT 319
>WB|WBGene00019249 [details] [associations]
symbol:H28G03.1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00390000002308 EMBL:FO081568 RefSeq:NP_741783.1
UniGene:Cel.17692 ProteinModelPortal:H2L0D0 SMR:H2L0D0 PRIDE:H2L0D0
EnsemblMetazoa:H28G03.1a.1 EnsemblMetazoa:H28G03.1a.2 GeneID:180791
KEGG:cel:CELE_H28G03.1 CTD:180791 WormBase:H28G03.1a OMA:HIVNERK
Uniprot:H2L0D0
Length = 336
Score = 100 (40.3 bits), Expect = 0.00056, P = 0.00056
Identities = 31/96 (32%), Positives = 45/96 (46%)
Query: 44 GQGP-QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIAS---VKIPVGK---GCGFV 96
G G Q + +F+GGL + TDE L FSQ+G + ++ P K G GFV
Sbjct: 57 GMGQYQHDSPPQLRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFV 116
Query: 97 QFANSLGQIMAINGVGHTMEGKFMMVMGMLFRHQMT 132
FA+ A+N H + GK + + R QM+
Sbjct: 117 TFASIFSAESAMNDRPHKLGGKTVDSKRAIPREQMS 152
>UNIPROTKB|E9PSF1 [details] [associations]
symbol:RBM38 "RNA-binding protein 38" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AL109955 HGNC:HGNC:15818
IPI:IPI00974044 ProteinModelPortal:E9PSF1 SMR:E9PSF1
Ensembl:ENST00000342690 ArrayExpress:E9PSF1 Bgee:E9PSF1
Uniprot:E9PSF1
Length = 77
Score = 86 (35.3 bits), Expect = 0.00057, P = 0.00057
Identities = 20/53 (37%), Positives = 29/53 (54%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG 94
APG S+ D++ T IFVGGL + TD LR+ F +G+I + + G
Sbjct: 20 APGAMHGSQKDTTFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTG 72
>UNIPROTKB|F6VZ39 [details] [associations]
symbol:RBM38 "RNA-binding protein 38" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AL109955
HGNC:HGNC:15818 IPI:IPI00927190 ProteinModelPortal:F6VZ39
SMR:F6VZ39 PRIDE:F6VZ39 Ensembl:ENST00000344785 ArrayExpress:F6VZ39
Bgee:F6VZ39 Uniprot:F6VZ39
Length = 123
Score = 88 (36.0 bits), Expect = 0.00066, P = 0.00066
Identities = 34/105 (32%), Positives = 48/105 (45%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI----PVGK--GCGFVQFANSL 102
S+ D++ T IFVGGL + TD LR+ F +G+I + GK G GFV A+
Sbjct: 4 SQKDTTFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRA 63
Query: 103 GQIMAINGVGHTMEGKFMMV----MGMLFRHQMTQ-ACTLQQLRP 142
A ++G+ V +G R T A +QQL P
Sbjct: 64 AAERACKDPNPIIDGRKANVNLAYLGAKPRSLQTGFAIGVQQLHP 108
>ZFIN|ZDB-GENE-040426-791 [details] [associations]
symbol:zgc:55733 "zgc:55733" species:7955 "Danio
rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-040426-791
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 HOGENOM:HOG000231958
HOVERGEN:HBG002302 InterPro:IPR017347 PIRSF:PIRSF037992 KO:K12884
EMBL:BC046891 IPI:IPI00503713 RefSeq:NP_957287.1 UniGene:Dr.81689
ProteinModelPortal:Q802Y4 SMR:Q802Y4 PRIDE:Q802Y4 GeneID:393968
KEGG:dre:393968 NextBio:20814939 ArrayExpress:Q802Y4 Bgee:Q802Y4
Uniprot:Q802Y4
Length = 289
Score = 99 (39.9 bits), Expect = 0.00066, P = 0.00066
Identities = 27/70 (38%), Positives = 39/70 (55%)
Query: 53 SSNTTIFVGGLDPN-VTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
S N+ +F+G L+ VT D+ FS+YG+I V V KG FVQ+AN A+NG
Sbjct: 23 SLNSRVFIGNLNTMLVTKADVEAIFSKYGKI--VGCSVHKGFAFVQYANERNARAAVNGE 80
Query: 112 -GHTMEGKFM 120
G + G+ +
Sbjct: 81 DGRMIVGQVL 90
>ASPGD|ASPL0000076731 [details] [associations]
symbol:AN4865 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:BN001303 EMBL:AACD01000084 eggNOG:COG0724
KO:K11294 OrthoDB:EOG422DTZ RefSeq:XP_662469.1
ProteinModelPortal:Q5B3L5 STRING:Q5B3L5
EnsemblFungi:CADANIAT00005540 GeneID:2872664 KEGG:ani:AN4865.2
HOGENOM:HOG000195050 OMA:SARIMTE Uniprot:Q5B3L5
Length = 524
Score = 101 (40.6 bits), Expect = 0.00068, P = 0.00068
Identities = 27/75 (36%), Positives = 43/75 (57%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIAS---VKIPVGK--GCGFVQFANSLGQ 104
EG S+N +FVG L NVT+E L Q F Q+GE+++ + G+ G G+V+F N+
Sbjct: 273 EGASAN--LFVGNLSWNVTEEWLHQEFEQFGELSARIMTERDTGRSRGFGYVEFTNAADA 330
Query: 105 IMAINGVG-HTMEGK 118
A + H ++G+
Sbjct: 331 AKAYEAMKEHEIDGR 345
>UNIPROTKB|G3V5X6 [details] [associations]
symbol:HNRNPC "Heterogeneous nuclear ribonucleoproteins
C1/C2" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:AL135744 HGNC:HGNC:5035 ChiTaRS:HNRNPC
ProteinModelPortal:G3V5X6 SMR:G3V5X6 Ensembl:ENST00000555176
ArrayExpress:G3V5X6 Bgee:G3V5X6 Uniprot:G3V5X6
Length = 117
Score = 85 (35.0 bits), Expect = 0.00073, P = 0.00072
Identities = 24/70 (34%), Positives = 37/70 (52%)
Query: 53 SSNTTIFVGGLDPNVTDE-DLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
S N+ +F+G L+ V + D+ FS+YG+I V V KG FVQ+ N A+ G
Sbjct: 13 SMNSRVFIGNLNTLVVKKSDVEAIFSKYGKI--VGCSVHKGFAFVQYVNERNARAAVAGE 70
Query: 112 -GHTMEGKFM 120
G + G+ +
Sbjct: 71 DGRMIAGQVL 80
>UNIPROTKB|A5GFN8 [details] [associations]
symbol:RNPC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070935 "3'-UTR-mediated mRNA stabilization"
evidence=IEA] [GO:0043484 "regulation of RNA splicing"
evidence=IEA] [GO:0010830 "regulation of myotube differentiation"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0007050 "cell cycle arrest"
evidence=IEA] [GO:0006978 "DNA damage response, signal transduction
by p53 class mediator resulting in transcription of p21 class
mediator" evidence=IEA] [GO:0006977 "DNA damage response, signal
transduction by p53 class mediator resulting in cell cycle arrest"
evidence=IEA] [GO:0003730 "mRNA 3'-UTR binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0008285 GO:GO:0006977 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0007050 GO:GO:0003730 GO:GO:0043484 GO:GO:0006978
HOGENOM:HOG000276232 GO:GO:0070935 GO:GO:0010830 EMBL:CR956362
HOVERGEN:HBG108399 GeneTree:ENSGT00390000002308 OrthoDB:EOG4DV5NS
CTD:55544 OMA:VGYGYPA UniGene:Ssc.29738 RefSeq:NP_001098782.1
SMR:A5GFN8 STRING:A5GFN8 Ensembl:ENSSSCT00000008216
GeneID:100125973 KEGG:ssc:100125973 Uniprot:A5GFN8
Length = 239
Score = 98 (39.6 bits), Expect = 0.00077, P = 0.00077
Identities = 37/112 (33%), Positives = 51/112 (45%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI----PVGK--GCGF 95
APG S+ D++ T IFVGGL + TD LR+ F +G+I + GK G GF
Sbjct: 20 APGAMHGSQKDTTFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGF 79
Query: 96 VQFANSLGQIMAINGVGHTMEGKFMMV----MGMLFRHQMTQ-ACTLQQLRP 142
V A+ A ++G+ V +G R T A +QQL P
Sbjct: 80 VTMADRAAAERACKDPNPNIDGRKANVNLAYLGAKPRSLQTGFAIGVQQLHP 131
>TAIR|locus:2124261 [details] [associations]
symbol:PAB2 "AT4G34110" species:3702 "Arabidopsis
thaliana" [GO:0003723 "RNA binding" evidence=ISS] [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0009651
"response to salt stress" evidence=IEP] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006486 "protein glycosylation" evidence=RCA] [GO:0006413
"translational initiation" evidence=ISS] InterPro:IPR000504
InterPro:IPR002004 InterPro:IPR002343 InterPro:IPR006515
InterPro:IPR012677 Pfam:PF00076 Pfam:PF00658 PRINTS:PR00961
PROSITE:PS50102 PROSITE:PS51309 SMART:SM00360 SMART:SM00517
GO:GO:0005829 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0000166
GO:GO:0009651 Gene3D:3.30.70.330 GO:GO:0003743 EMBL:AL021961
EMBL:AL161584 eggNOG:COG0724 KO:K13126 Gene3D:1.10.1900.10
SUPFAM:SSF63570 TIGRFAMs:TIGR01628 HOGENOM:HOG000217922 EMBL:L19418
EMBL:BT002354 IPI:IPI00532109 PIR:T05425 RefSeq:NP_195137.5
UniGene:At.25252 ProteinModelPortal:P42731 SMR:P42731 IntAct:P42731
STRING:P42731 PaxDb:P42731 PRIDE:P42731 ProMEX:P42731
EnsemblPlants:AT4G34110.1 GeneID:829557 KEGG:ath:AT4G34110
TAIR:At4g34110 InParanoid:P42731 OMA:FDPIKGR PhylomeDB:P42731
ProtClustDB:CLSN2714507 Genevestigator:P42731 GermOnline:AT4G34110
Uniprot:P42731
Length = 629
Score = 101 (40.6 bits), Expect = 0.00086, P = 0.00086
Identities = 31/101 (30%), Positives = 53/101 (52%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVG--KGCGFVQFANSLGQIMA 107
SSN ++V LDP+++DE L++ FS +G + S K+ P G KG GFV FA A
Sbjct: 317 SSN--LYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDPNGTSKGSGFVAFATPEEATEA 374
Query: 108 INGV-GHTMEGK--FMMVMGMLFRHQMTQACTLQQLRPMGL 145
++ + G +E K ++ + ++ Q+RP+ +
Sbjct: 375 MSQLSGKMIESKPLYVAIAQRKEDRRVRLQAQFSQVRPVAM 415
>UNIPROTKB|Q5QPM2 [details] [associations]
symbol:RALY "RNA-binding protein Raly" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AL031668
UniGene:Hs.136947 HGNC:HGNC:15921 ChiTaRS:RALY EMBL:AL034549
IPI:IPI00640938 SMR:Q5QPM2 MINT:MINT-1399328 STRING:Q5QPM2
Ensembl:ENST00000413297 Uniprot:Q5QPM2
Length = 89
Score = 84 (34.6 bits), Expect = 0.00093, P = 0.00093
Identities = 23/73 (31%), Positives = 38/73 (52%)
Query: 48 QSEGDSSNTTIFVGGLDPN-VTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIM 106
+++ S N+ +F+G L+ V D+ FS+YG +A V KG FVQ++N
Sbjct: 13 KNDPKSINSRVFIGNLNTALVKKSDVETIFSKYGRVAGCS--VHKGYAFVQYSNERHARA 70
Query: 107 AINGV-GHTMEGK 118
A+ G G + G+
Sbjct: 71 AVLGENGRVLAGQ 83
>UNIPROTKB|D6RAF8 [details] [associations]
symbol:HNRNPD "Heterogeneous nuclear ribonucleoprotein D0"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0043488 "regulation of mRNA stability" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005829 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0048255 HOGENOM:HOG000234441 EMBL:AC124016
HGNC:HGNC:5036 ChiTaRS:HNRNPD InterPro:IPR012956 Pfam:PF08143
IPI:IPI00965952 ProteinModelPortal:D6RAF8 SMR:D6RAF8
Ensembl:ENST00000507010 ArrayExpress:D6RAF8 Bgee:D6RAF8
Uniprot:D6RAF8
Length = 221
Score = 97 (39.2 bits), Expect = 0.00093, P = 0.00093
Identities = 25/86 (29%), Positives = 43/86 (50%)
Query: 39 SNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIA--SVKI-PV---GKG 92
SN +P + +F+GGL + T +DL+ FS++GE+ ++K+ P+ +G
Sbjct: 80 SNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRG 139
Query: 93 CGFVQFANSLGQIMAINGVGHTMEGK 118
GFV F S ++ H + GK
Sbjct: 140 FGFVLFKESESVDKVMDQKEHKLNGK 165
>UNIPROTKB|F1PA19 [details] [associations]
symbol:HNRNPAB "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104347 EMBL:AAEX03007693 EMBL:AAEX03007694
Ensembl:ENSCAFT00000000377 OMA:GNDSSYG Uniprot:F1PA19
Length = 264
Score = 98 (39.6 bits), Expect = 0.00096, P = 0.00096
Identities = 26/83 (31%), Positives = 43/83 (51%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANSLGQIMAINGV 111
IFVGGL+P T+E +R+ F ++GEI ++++P+ +G F+ F +
Sbjct: 86 IFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVKKVLEKK 145
Query: 112 GHTMEGKFMMVMGMLFRHQ-MTQ 133
HT+ G +G+ Q MTQ
Sbjct: 146 FHTISGSKRCGLGVGLPLQLMTQ 168
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.133 0.398 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 155 141 0.00091 102 3 11 22 0.43 31
30 0.47 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 201
No. of states in DFA: 563 (60 KB)
Total size of DFA: 124 KB (2080 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 13.23u 0.14s 13.37t Elapsed: 00:00:01
Total cpu time: 13.25u 0.14s 13.39t Elapsed: 00:00:01
Start: Thu May 9 19:14:11 2013 End: Thu May 9 19:14:12 2013
WARNINGS ISSUED: 1