BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031682
(155 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449446975|ref|XP_004141245.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
sativus]
gi|449498692|ref|XP_004160607.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
sativus]
Length = 426
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 94/119 (78%), Positives = 102/119 (85%), Gaps = 1/119 (0%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG-YASNGAPGQGPQSEGDSSNTTIF 59
MTEMNG+YCSSRPMRIGAATPRKSSGYQQQ+SSQGG Y++NG QG QSEGDS+NTTIF
Sbjct: 236 MTEMNGIYCSSRPMRIGAATPRKSSGYQQQHSSQGGGYSTNGYFSQGLQSEGDSANTTIF 295
Query: 60 VGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGK 118
VGGLDPNVTDEDLRQPFSQYGEI SVKIPVGKGCGFVQFAN A+ + T+ GK
Sbjct: 296 VGGLDPNVTDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNGTVIGK 354
>gi|359492060|ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Vitis vinifera]
Length = 418
Score = 186 bits (471), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 94/118 (79%), Positives = 99/118 (83%), Gaps = 3/118 (2%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSS GGYASNGA QS+GDS NTTIFV
Sbjct: 236 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSHGGYASNGA---SVQSDGDSMNTTIFV 292
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGK 118
GGLDPNV+DEDLRQPFSQYGEI SVKIPVGKGCGFVQFAN A+ + T+ GK
Sbjct: 293 GGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEDALQKLNGTVIGK 350
>gi|147856810|emb|CAN81343.1| hypothetical protein VITISV_008697 [Vitis vinifera]
Length = 536
Score = 185 bits (470), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 94/118 (79%), Positives = 99/118 (83%), Gaps = 3/118 (2%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSS GGYASNGA QS+GDS NTTIFV
Sbjct: 124 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSHGGYASNGA---SVQSDGDSMNTTIFV 180
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGK 118
GGLDPNV+DEDLRQPFSQYGEI SVKIPVGKGCGFVQFAN A+ + T+ GK
Sbjct: 181 GGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEDALQKLNGTVIGK 238
>gi|302142363|emb|CBI19566.3| unnamed protein product [Vitis vinifera]
Length = 324
Score = 185 bits (469), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 94/118 (79%), Positives = 99/118 (83%), Gaps = 3/118 (2%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSS GGYASNGA QS+GDS NTTIFV
Sbjct: 142 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSHGGYASNGA---SVQSDGDSMNTTIFV 198
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGK 118
GGLDPNV+DEDLRQPFSQYGEI SVKIPVGKGCGFVQFAN A+ + T+ GK
Sbjct: 199 GGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEDALQKLNGTVIGK 256
>gi|224137382|ref|XP_002327112.1| predicted protein [Populus trichocarpa]
gi|222835427|gb|EEE73862.1| predicted protein [Populus trichocarpa]
Length = 429
Score = 182 bits (462), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 92/118 (77%), Positives = 98/118 (83%), Gaps = 4/118 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCSSRPMRIGAATPRKSSGYQQQ GGY SNGA QG QS+GDS+NTTIFV
Sbjct: 245 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQ----GGYGSNGASAQGFQSDGDSNNTTIFV 300
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGK 118
GGLDPNVTDEDL+QPFSQYGEI SVKIPVGKGCGFVQFAN A+ + T+ GK
Sbjct: 301 GGLDPNVTDEDLKQPFSQYGEIVSVKIPVGKGCGFVQFANRDNAEEALQKLNGTVIGK 358
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 45 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQF 98
Q Q EG N TI++G L + + L F GEIAS+K+ K G GFV+F
Sbjct: 82 QKQQREGSGENKTIWIGDLHHWMDENYLHSCFVSTGEIASIKVIRNKQTGLSEGYGFVEF 141
>gi|224067280|ref|XP_002302445.1| predicted protein [Populus trichocarpa]
gi|222844171|gb|EEE81718.1| predicted protein [Populus trichocarpa]
Length = 429
Score = 178 bits (452), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 91/118 (77%), Positives = 96/118 (81%), Gaps = 4/118 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCSSRPMRIGAATPRKSSGYQQQ GGY SNGA QG QS+GDSSN TIFV
Sbjct: 248 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQ----GGYGSNGASSQGFQSDGDSSNATIFV 303
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGK 118
GGLDPNVTDEDL+QPFSQYGEI SVKIPV KGCGFVQFAN A+ + T+ GK
Sbjct: 304 GGLDPNVTDEDLKQPFSQYGEIVSVKIPVSKGCGFVQFANRNNAEEALQKLNGTVIGK 361
>gi|449470045|ref|XP_004152729.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
sativus]
gi|449496017|ref|XP_004160013.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
sativus]
Length = 429
Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/118 (73%), Positives = 99/118 (83%), Gaps = 1/118 (0%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG+YCSSRPMRIGAATP+KSSGYQQQYSSQG YASNG+ G QS+GD +NTTIF+
Sbjct: 244 MTEMNGIYCSSRPMRIGAATPKKSSGYQQQYSSQG-YASNGSFSHGHQSDGDFTNTTIFI 302
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGK 118
GGLDPNVTDEDL+Q FSQ+GEI SVKIPVGKGCGF+QFAN A+ + T+ GK
Sbjct: 303 GGLDPNVTDEDLKQLFSQHGEIVSVKIPVGKGCGFIQFANRKNAEEALQKLNGTVIGK 360
Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 10/76 (13%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQF 98
G + + S+ +IFVG L +VTD L + F S+Y + + K+ KG GFV+F
Sbjct: 175 GDKRSENGSDLSIFVGDLAADVTDSVLHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRF 234
Query: 99 A--NSLGQIMA-INGV 111
N Q M +NG+
Sbjct: 235 GDDNERSQAMTEMNGI 250
>gi|255538402|ref|XP_002510266.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223550967|gb|EEF52453.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 443
Score = 174 bits (442), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 87/118 (73%), Positives = 96/118 (81%), Gaps = 4/118 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCSSR MRIGAATPRKS+GYQ Q GGY SNGA GQ Q++GDS+NTTIFV
Sbjct: 261 MTEMNGVYCSSRAMRIGAATPRKSTGYQHQ----GGYVSNGASGQAFQADGDSTNTTIFV 316
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGK 118
GGLDPNVTDEDL+QPFSQYGEI SVKIPVGKGCGFVQFA+ A+ + T+ GK
Sbjct: 317 GGLDPNVTDEDLKQPFSQYGEIVSVKIPVGKGCGFVQFASRSNAEEALQKLNGTVIGK 374
>gi|297741313|emb|CBI32444.3| unnamed protein product [Vitis vinifera]
Length = 342
Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 86/123 (69%), Positives = 96/123 (78%), Gaps = 5/123 (4%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ-----GGYASNGAPGQGPQSEGDSSN 55
M EMNG+YCSSRPMRIG ATP+K+SGYQQQYSSQ GG ASNGA QG Q+ GDS+N
Sbjct: 161 MNEMNGIYCSSRPMRIGVATPKKASGYQQQYSSQALVLAGGNASNGAVAQGSQANGDSTN 220
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTM 115
TTIFVGGLD VTDEDLRQ FSQ+GE+ SVKIPVGKGCGFVQFAN A+ + T+
Sbjct: 221 TTIFVGGLDSEVTDEDLRQSFSQFGEVVSVKIPVGKGCGFVQFANRNSAEDALQRLNGTV 280
Query: 116 EGK 118
GK
Sbjct: 281 IGK 283
>gi|147781769|emb|CAN74486.1| hypothetical protein VITISV_029928 [Vitis vinifera]
Length = 434
Score = 172 bits (435), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 86/123 (69%), Positives = 96/123 (78%), Gaps = 5/123 (4%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ-----GGYASNGAPGQGPQSEGDSSN 55
M EMNG+YCSSRPMRIG ATP+K+SGYQQQYSSQ GG ASNGA QG Q+ GDS+N
Sbjct: 253 MNEMNGIYCSSRPMRIGVATPKKASGYQQQYSSQALVLAGGNASNGAVAQGSQANGDSTN 312
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTM 115
TTIFVGGLD VTDEDLRQ FSQ+GE+ SVKIPVGKGCGFVQFAN A+ + T+
Sbjct: 313 TTIFVGGLDSEVTDEDLRQSFSQFGEVVSVKIPVGKGCGFVQFANRNSAEDALQRLNGTV 372
Query: 116 EGK 118
GK
Sbjct: 373 IGK 375
>gi|225428741|ref|XP_002285031.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Vitis vinifera]
Length = 416
Score = 171 bits (434), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 86/123 (69%), Positives = 96/123 (78%), Gaps = 5/123 (4%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ-----GGYASNGAPGQGPQSEGDSSN 55
M EMNG+YCSSRPMRIG ATP+K+SGYQQQYSSQ GG ASNGA QG Q+ GDS+N
Sbjct: 235 MNEMNGIYCSSRPMRIGVATPKKASGYQQQYSSQALVLAGGNASNGAVAQGSQANGDSTN 294
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTM 115
TTIFVGGLD VTDEDLRQ FSQ+GE+ SVKIPVGKGCGFVQFAN A+ + T+
Sbjct: 295 TTIFVGGLDSEVTDEDLRQSFSQFGEVVSVKIPVGKGCGFVQFANRNSAEDALQRLNGTV 354
Query: 116 EGK 118
GK
Sbjct: 355 IGK 357
>gi|356521484|ref|XP_003529385.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 431
Score = 171 bits (433), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 84/123 (68%), Positives = 97/123 (78%), Gaps = 5/123 (4%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ-----GGYASNGAPGQGPQSEGDSSN 55
MTEMNGVYCSSRPMRIG ATP+K+ GYQQQYSSQ GG+A+NGA QG SEGD +N
Sbjct: 254 MTEMNGVYCSSRPMRIGVATPKKTYGYQQQYSSQAVLLAGGHAANGAVAQGSHSEGDLNN 313
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTM 115
TTIFVGGLD + +DEDLRQPF Q+GE+ SVKIPVGKGCGFVQFA+ AI+ + T+
Sbjct: 314 TTIFVGGLDSDTSDEDLRQPFLQFGEVVSVKIPVGKGCGFVQFADRKNAEEAIHALNGTV 373
Query: 116 EGK 118
GK
Sbjct: 374 IGK 376
>gi|356500047|ref|XP_003518846.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 431
Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/123 (67%), Positives = 97/123 (78%), Gaps = 5/123 (4%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ-----GGYASNGAPGQGPQSEGDSSN 55
MTEMNGVYCSSRPMRIG ATP+K+ G+QQQYSSQ GG+++NGA QG SEGD +N
Sbjct: 253 MTEMNGVYCSSRPMRIGVATPKKTYGFQQQYSSQAVVLAGGHSANGAVAQGSHSEGDINN 312
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTM 115
TTIFVGGLD + +DEDLRQPF Q+GE+ SVKIPVGKGCGFVQFA+ AI G+ T+
Sbjct: 313 TTIFVGGLDSDTSDEDLRQPFLQFGEVVSVKIPVGKGCGFVQFADRKNAEEAIQGLNGTV 372
Query: 116 EGK 118
GK
Sbjct: 373 IGK 375
>gi|15594035|emb|CAC69852.1| nucleic acid binding protein [Nicotiana tabacum]
Length = 456
Score = 169 bits (429), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/118 (72%), Positives = 92/118 (77%), Gaps = 1/118 (0%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGY SNG P QG Q + DS+NTTIFV
Sbjct: 269 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGY-SNGGPAQGSQPDADSTNTTIFV 327
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGK 118
GGLDPNV+DEDLRQPF QYGEI SVKIPV + QFAN A+ + T GK
Sbjct: 328 GGLDPNVSDEDLRQPFVQYGEIVSVKIPVEERVWVWQFANRNDAEEALQKLNGTFIGK 385
>gi|224123466|ref|XP_002330321.1| predicted protein [Populus trichocarpa]
gi|222871356|gb|EEF08487.1| predicted protein [Populus trichocarpa]
Length = 397
Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 84/123 (68%), Positives = 95/123 (77%), Gaps = 5/123 (4%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ-----GGYASNGAPGQGPQSEGDSSN 55
M EMNG +CSSRPMRIG ATP+K S YQQQYSSQ GG+ASNGA QG QS+GDS+N
Sbjct: 216 MMEMNGAFCSSRPMRIGVATPKKPSAYQQQYSSQALVLAGGHASNGAMAQGSQSDGDSNN 275
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTM 115
TTIFVGG+D +VTDEDLRQPFSQ+GE+ SVKIPVGKGC FVQFAN A+ + T
Sbjct: 276 TTIFVGGIDSDVTDEDLRQPFSQFGEVVSVKIPVGKGCAFVQFANRKNAEDALQSLNGTT 335
Query: 116 EGK 118
GK
Sbjct: 336 IGK 338
>gi|224105517|ref|XP_002313840.1| predicted protein [Populus trichocarpa]
gi|222850248|gb|EEE87795.1| predicted protein [Populus trichocarpa]
Length = 412
Score = 168 bits (425), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 82/123 (66%), Positives = 94/123 (76%), Gaps = 5/123 (4%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ-----GGYASNGAPGQGPQSEGDSSN 55
+TEMNG YCSSRPMRIG ATP+K S YQQQYSSQ GG+ASNG QG QS+GDS+N
Sbjct: 231 ITEMNGAYCSSRPMRIGVATPKKPSAYQQQYSSQALVLAGGHASNGTMAQGSQSDGDSNN 290
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTM 115
TTIFVGG+D +VTDEDLRQPFSQ+GE+ SVK+P GKGC FVQFAN A+ + T
Sbjct: 291 TTIFVGGIDSDVTDEDLRQPFSQFGEVVSVKMPTGKGCAFVQFANRKNAEDALQSLNGTT 350
Query: 116 EGK 118
GK
Sbjct: 351 IGK 353
>gi|359492062|ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Vitis vinifera]
Length = 409
Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 86/118 (72%), Positives = 91/118 (77%), Gaps = 12/118 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSS QS+GDS NTTIFV
Sbjct: 236 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSH------------VQSDGDSMNTTIFV 283
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGK 118
GGLDPNV+DEDLRQPFSQYGEI SVKIPVGKGCGFVQFAN A+ + T+ GK
Sbjct: 284 GGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEDALQKLNGTVIGK 341
>gi|255555523|ref|XP_002518798.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223542179|gb|EEF43723.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 438
Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 81/123 (65%), Positives = 95/123 (77%), Gaps = 5/123 (4%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ-----GGYASNGAPGQGPQSEGDSSN 55
M EMNGVYCSSRPMRIG ATP+KS YQQQYSSQ GG+A NG+ QG QS+GDS+N
Sbjct: 257 MMEMNGVYCSSRPMRIGVATPKKSPAYQQQYSSQALVLAGGHAPNGSMAQGSQSDGDSNN 316
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTM 115
TTIFVGG+D +++DEDLRQPFSQ+GE+ SVKIP GKGCGFVQFA+ A+ + T
Sbjct: 317 TTIFVGGIDSDISDEDLRQPFSQFGEVVSVKIPAGKGCGFVQFADRKSAEDALQSLNGTT 376
Query: 116 EGK 118
GK
Sbjct: 377 IGK 379
>gi|388505308|gb|AFK40720.1| unknown [Medicago truncatula]
Length = 454
Score = 162 bits (410), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 82/124 (66%), Positives = 95/124 (76%), Gaps = 6/124 (4%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ------GGYASNGAPGQGPQSEGDSS 54
MTEMNGVYCSSRPMR+G ATP+K+ G QQYSSQ GG SNGA QG QSEGDS+
Sbjct: 273 MTEMNGVYCSSRPMRVGVATPKKTYGNPQQYSSQAVVLAGGGGHSNGAMAQGSQSEGDSN 332
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHT 114
NTTIFVGGLD +++DEDLRQPF Q+G++ SVKIPVGKGCGFVQ A+ AI G+ T
Sbjct: 333 NTTIFVGGLDSDISDEDLRQPFLQFGDVISVKIPVGKGCGFVQLADRKNAEEAIQGLNGT 392
Query: 115 MEGK 118
+ GK
Sbjct: 393 VIGK 396
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 14/105 (13%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P ++ +++ +++ G G+ SE +S+ ++FVG L +VTD L++ F
Sbjct: 179 GTMMPNTDQAFRLNWAT---FSAAGGGGERRSSEA-TSDLSVFVGDLAIDVTDAMLQETF 234
Query: 77 -SQYGEIASVKIPV------GKGCGFVQFANSLGQIMA---INGV 111
S++ I K+ + KG GFV+F + + A +NGV
Sbjct: 235 ASKFSSIKGAKVVIDSNTGRSKGYGFVRFGDESERTRAMTEMNGV 279
>gi|357475467|ref|XP_003608019.1| RNA Binding Protein [Medicago truncatula]
gi|355509074|gb|AES90216.1| RNA Binding Protein [Medicago truncatula]
Length = 454
Score = 162 bits (410), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 82/124 (66%), Positives = 95/124 (76%), Gaps = 6/124 (4%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ------GGYASNGAPGQGPQSEGDSS 54
MTEMNGVYCSSRPMR+G ATP+K+ G QQYSSQ GG SNGA QG QSEGDS+
Sbjct: 273 MTEMNGVYCSSRPMRVGVATPKKTYGNPQQYSSQAVVLAGGGGHSNGAMAQGSQSEGDSN 332
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHT 114
NTTIFVGGLD +++DEDLRQPF Q+G++ SVKIPVGKGCGFVQ A+ AI G+ T
Sbjct: 333 NTTIFVGGLDSDISDEDLRQPFLQFGDVISVKIPVGKGCGFVQLADRKNAEEAIQGLNGT 392
Query: 115 MEGK 118
+ GK
Sbjct: 393 VIGK 396
Score = 35.8 bits (81), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 14/105 (13%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P ++ +++ +++ G G+ SE +S+ ++FVG L +VTD L++ F
Sbjct: 179 GTMMPNTDQAFRLNWAT---FSAAGGGGERRSSEA-TSDLSVFVGDLAIDVTDAMLQETF 234
Query: 77 -SQYGEIASVKIPV------GKGCGFVQFANSLGQIMA---INGV 111
S++ I K+ + KG GFV+F + + A +NGV
Sbjct: 235 ASKFSSIKGAKVVIDSNTGRSKGYGFVRFGDESERTRAMTEMNGV 279
>gi|356510359|ref|XP_003523906.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 409
Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/125 (68%), Positives = 92/125 (73%), Gaps = 9/125 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCSSRPMRIGAATPRK+SGYQQ G SNG Q SE DS+NTTIFV
Sbjct: 232 MTEMNGVYCSSRPMRIGAATPRKTSGYQQ------GSQSNGTSSQ---SEADSTNTTIFV 282
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGKFM 120
GGLDPNVT EDL+QPFSQYGEI SVKIPVGKGCGFVQFAN A+ + T GK M
Sbjct: 283 GGLDPNVTAEDLKQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQM 342
Query: 121 MVMGM 125
+ +
Sbjct: 343 VRLSW 347
>gi|82621158|gb|ABB86267.1| DNA binding protein ACBF-like [Solanum tuberosum]
Length = 372
Score = 159 bits (402), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 79/123 (64%), Positives = 94/123 (76%), Gaps = 6/123 (4%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ-----GGYASNGAPGQGPQSEGDSSN 55
MTEMNG+YCSSRPMR+G ATP+K S QQQ+SSQ GGYASNG+ G QS+GDSSN
Sbjct: 185 MTEMNGIYCSSRPMRVGVATPKKPSA-QQQFSSQAVILSGGYASNGSATHGSQSDGDSSN 243
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTM 115
TTIFVGGLD +VTDE+LRQ F+Q+GE+ SVKIP GKGCGFVQF++ AI + +
Sbjct: 244 TTIFVGGLDSDVTDEELRQSFTQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAI 303
Query: 116 EGK 118
GK
Sbjct: 304 IGK 306
>gi|356562301|ref|XP_003549410.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 401
Score = 158 bits (399), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 84/118 (71%), Positives = 90/118 (76%), Gaps = 9/118 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MT+MNGVYCSSRPMRIGAATPRKSSG+QQ G SNG Q SE DS+NTTIFV
Sbjct: 225 MTQMNGVYCSSRPMRIGAATPRKSSGHQQ------GGLSNGTANQ---SEADSTNTTIFV 275
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGK 118
GGLDPNV+DEDLRQPFSQYGEI SVKIPVGKGCGFVQFAN A+ + T GK
Sbjct: 276 GGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGK 333
>gi|356552180|ref|XP_003544447.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 425
Score = 158 bits (399), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 84/118 (71%), Positives = 90/118 (76%), Gaps = 9/118 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MT+MNGVYCSSRPMRIGAATPRKSSG+QQ G SNG Q SE DS+NTTIFV
Sbjct: 249 MTQMNGVYCSSRPMRIGAATPRKSSGHQQ------GGQSNGTANQ---SEADSTNTTIFV 299
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGK 118
GGLDPNV+DEDLRQPFSQYGEI SVKIPVGKGCGFVQFAN A+ + T GK
Sbjct: 300 GGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTSIGK 357
>gi|1899188|gb|AAC49850.1| DNA binding protein ACBF [Nicotiana tabacum]
Length = 428
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/123 (65%), Positives = 93/123 (75%), Gaps = 6/123 (4%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ-----GGYASNGAPGQGPQSEGDSSN 55
MTEMNGVYCSSR MRIG ATP+K S QQQYSSQ GGYASNGA G QS+GD+SN
Sbjct: 236 MTEMNGVYCSSRAMRIGVATPKKPSA-QQQYSSQAVILSGGYASNGAATHGSQSDGDASN 294
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTM 115
TTIFVGGLD +VTDE+LRQ F+Q+GE+ SVKIP GKGCGFVQF++ AI + +
Sbjct: 295 TTIFVGGLDSDVTDEELRQSFNQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAI 354
Query: 116 EGK 118
GK
Sbjct: 355 IGK 357
>gi|2708532|gb|AAB92518.1| putative RNA binding protein [Nicotiana tabacum]
Length = 482
Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/123 (65%), Positives = 93/123 (75%), Gaps = 6/123 (4%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ-----GGYASNGAPGQGPQSEGDSSN 55
MTEMNGVYCSSR MRIG ATP+K S QQQYSSQ GGYASNGA G QS+GD+SN
Sbjct: 290 MTEMNGVYCSSRAMRIGVATPKKPSA-QQQYSSQAVILSGGYASNGAATHGSQSDGDASN 348
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTM 115
TTIFVGGLD +VTDE+LRQ F+Q+GE+ SVKIP GKGCGFVQF++ AI + +
Sbjct: 349 TTIFVGGLDSDVTDEELRQSFNQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAI 408
Query: 116 EGK 118
GK
Sbjct: 409 IGK 411
>gi|449523756|ref|XP_004168889.1| PREDICTED: polyadenylate-binding protein RBP47-like [Cucumis
sativus]
Length = 437
Score = 155 bits (392), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 76/122 (62%), Positives = 94/122 (77%), Gaps = 4/122 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPG----QGPQSEGDSSNT 56
MTEMNG+YCSSRPMRIG ATP+K+SGYQQ Y+SQ + G P QG QS+ +S+NT
Sbjct: 252 MTEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHPNGMAVQGSQSDSESNNT 311
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTME 116
TIFVGGLD +V+DEDL+Q FS++G++ SVKIP+GKGCGFVQFAN AI G+ T+
Sbjct: 312 TIFVGGLDSDVSDEDLKQAFSKFGDVVSVKIPIGKGCGFVQFANRKNAEDAIQGLNGTVI 371
Query: 117 GK 118
GK
Sbjct: 372 GK 373
>gi|449455232|ref|XP_004145357.1| PREDICTED: polyadenylate-binding protein RBP47-like [Cucumis
sativus]
Length = 436
Score = 155 bits (392), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 76/122 (62%), Positives = 94/122 (77%), Gaps = 4/122 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPG----QGPQSEGDSSNT 56
MTEMNG+YCSSRPMRIG ATP+K+SGYQQ Y+SQ + G P QG QS+ +S+NT
Sbjct: 251 MTEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHPNGMAVQGSQSDSESNNT 310
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTME 116
TIFVGGLD +V+DEDL+Q FS++G++ SVKIP+GKGCGFVQFAN AI G+ T+
Sbjct: 311 TIFVGGLDSDVSDEDLKQAFSKFGDVVSVKIPIGKGCGFVQFANRKNAEDAIQGLNGTVI 370
Query: 117 GK 118
GK
Sbjct: 371 GK 372
>gi|75334879|sp|Q9LEB3.1|RBP47_NICPL RecName: Full=Polyadenylate-binding protein RBP47;
Short=Poly(A)-binding protein RBP47; AltName:
Full=RNA-binding protein 47; Short=NplRBP47
gi|9663769|emb|CAC01238.1| RNA Binding Protein 47 [Nicotiana plumbaginifolia]
Length = 428
Score = 155 bits (392), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 80/123 (65%), Positives = 92/123 (74%), Gaps = 6/123 (4%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ-----GGYASNGAPGQGPQSEGDSSN 55
MTEMNGVYCSSR MRIG ATP+K S ++Q YSSQ GGYASNGA G QS+GDSSN
Sbjct: 236 MTEMNGVYCSSRAMRIGVATPKKPSAHEQ-YSSQAVILSGGYASNGAATHGSQSDGDSSN 294
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTM 115
TTIFVGGLD VTDE+LRQ F+Q+GE+ SVKIP GKGCGFVQF++ AI + +
Sbjct: 295 TTIFVGGLDSEVTDEELRQSFNQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAI 354
Query: 116 EGK 118
GK
Sbjct: 355 IGK 357
>gi|9294614|dbj|BAB02953.1| DNA/RNA binding protein-like [Arabidopsis thaliana]
Length = 489
Score = 155 bits (391), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 75/123 (60%), Positives = 94/123 (76%), Gaps = 5/123 (4%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ-----GGYASNGAPGQGPQSEGDSSN 55
+TEMNG YCS+R MR+G ATP+++ QQQ+SSQ GG+ SNG+ G G QS+G+S+N
Sbjct: 261 LTEMNGAYCSNRQMRVGIATPKRAIANQQQHSSQAVILAGGHGSNGSMGYGSQSDGESTN 320
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTM 115
TIFVGG+DP+V DEDLRQPFSQ+GE+ SVKIPVGKGCGFVQFA+ AI + T+
Sbjct: 321 ATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKIPVGKGCGFVQFADRKSAEDAIESLNGTV 380
Query: 116 EGK 118
GK
Sbjct: 381 IGK 383
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 7/53 (13%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFAN 100
+ ++FVG L P+VTD L + FS +Y + S K+ + KG GFV+F +
Sbjct: 201 DLSVFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGD 253
>gi|15230291|ref|NP_188544.1| RNA-binding protein 47B [Arabidopsis thaliana]
gi|122246579|sp|Q0WW84.1|RB47B_ARATH RecName: Full=Polyadenylate-binding protein RBP47B;
Short=Poly(A)-binding protein RBP47B; AltName:
Full=RNA-binding protein 47B; Short=AtRBP47B
gi|110741040|dbj|BAE98614.1| putative nuclear acid binding protein [Arabidopsis thaliana]
gi|111074446|gb|ABH04596.1| At3g19130 [Arabidopsis thaliana]
gi|332642675|gb|AEE76196.1| RNA-binding protein 47B [Arabidopsis thaliana]
Length = 435
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/123 (60%), Positives = 94/123 (76%), Gaps = 5/123 (4%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ-----GGYASNGAPGQGPQSEGDSSN 55
+TEMNG YCS+R MR+G ATP+++ QQQ+SSQ GG+ SNG+ G G QS+G+S+N
Sbjct: 261 LTEMNGAYCSNRQMRVGIATPKRAIANQQQHSSQAVILAGGHGSNGSMGYGSQSDGESTN 320
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTM 115
TIFVGG+DP+V DEDLRQPFSQ+GE+ SVKIPVGKGCGFVQFA+ AI + T+
Sbjct: 321 ATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKIPVGKGCGFVQFADRKSAEDAIESLNGTV 380
Query: 116 EGK 118
GK
Sbjct: 381 IGK 383
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 7/53 (13%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFAN 100
+ ++FVG L P+VTD L + FS +Y + S K+ + KG GFV+F +
Sbjct: 201 DLSVFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGD 253
>gi|21618243|gb|AAM67293.1| nuclear acid binding protein, putative [Arabidopsis thaliana]
Length = 392
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/123 (60%), Positives = 94/123 (76%), Gaps = 5/123 (4%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ-----GGYASNGAPGQGPQSEGDSSN 55
+TEMNG YCS+R MR+G ATP+++ QQQ+SSQ GG+ SNG+ G G QS+G+S+N
Sbjct: 218 LTEMNGAYCSNRQMRVGIATPKRAIANQQQHSSQAVILAGGHGSNGSMGYGSQSDGESTN 277
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTM 115
TIFVGG+DP+V DEDLRQPFSQ+GE+ SVKIPVGKGCGFVQFA+ AI + T+
Sbjct: 278 ATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKIPVGKGCGFVQFADRKSAEDAIESLNGTV 337
Query: 116 EGK 118
GK
Sbjct: 338 IGK 340
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 7/53 (13%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFAN 100
+ ++FVG L P+VTD L + FS +Y + S K+ + KG GFV+F +
Sbjct: 158 DLSVFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGD 210
>gi|388494114|gb|AFK35123.1| unknown [Medicago truncatula]
Length = 425
Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 82/118 (69%), Positives = 89/118 (75%), Gaps = 9/118 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MT+MNGVYCSSRPMRIGAATPRKSSG+Q GG + G QSE DS+NTTIFV
Sbjct: 249 MTQMNGVYCSSRPMRIGAATPRKSSGHQP-----GGQTN----GTSSQSEADSTNTTIFV 299
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGK 118
GGLD NVTDEDL+Q FSQYGEIASVKIPVGKGCGFVQFAN A+ + TM GK
Sbjct: 300 GGLDSNVTDEDLKQTFSQYGEIASVKIPVGKGCGFVQFANRNNAEEALQKLNGTMIGK 357
>gi|297834824|ref|XP_002885294.1| RNA-binding protein 47B [Arabidopsis lyrata subsp. lyrata]
gi|297331134|gb|EFH61553.1| RNA-binding protein 47B [Arabidopsis lyrata subsp. lyrata]
Length = 435
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/123 (59%), Positives = 92/123 (74%), Gaps = 5/123 (4%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ-----GGYASNGAPGQGPQSEGDSSN 55
+TEMNG YCS+R MR+G ATP+++ QQQ+SSQ GG+ +NG+ G QS+G+S+N
Sbjct: 261 LTEMNGAYCSNRQMRVGVATPKRAIANQQQHSSQALILAGGHGANGSMAHGSQSDGESTN 320
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTM 115
TIFVGG+D +VTDEDLRQPFSQ+GE+ SVKIPVGKGCGFVQFA AI + T+
Sbjct: 321 ATIFVGGIDADVTDEDLRQPFSQFGEVVSVKIPVGKGCGFVQFAERKSAEDAIETLNGTV 380
Query: 116 EGK 118
GK
Sbjct: 381 IGK 383
>gi|357465449|ref|XP_003603009.1| RNA-binding protein [Medicago truncatula]
gi|355492057|gb|AES73260.1| RNA-binding protein [Medicago truncatula]
Length = 420
Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/118 (67%), Positives = 87/118 (73%), Gaps = 9/118 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ EMNGV+CSSR MRIGAATPRKSSGYQQ G SNG P Q S+ DS+NTTIFV
Sbjct: 246 LNEMNGVFCSSRAMRIGAATPRKSSGYQQ------GGQSNGTPSQ---SDTDSTNTTIFV 296
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGK 118
GGLDP+ T EDLRQPFSQYGEI SVKIPVGKGCGFVQFAN A+ + T GK
Sbjct: 297 GGLDPSATAEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTVGK 354
>gi|82621116|gb|ABB86246.1| DNA-binding protein-like [Solanum tuberosum]
Length = 423
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 75/117 (64%), Positives = 88/117 (75%), Gaps = 1/117 (0%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG+YCSSR MRIG ATP+K S QQYSSQGG+ASNGA Q Q++ D SNTT+FV
Sbjct: 237 MTEMNGIYCSSRAMRIGVATPKKPSA-MQQYSSQGGHASNGAATQTSQTDSDLSNTTVFV 295
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEG 117
GGLD +VTDE+LRQ FSQ+G + SVKIP GKGCGFVQF+ AI + T+ G
Sbjct: 296 GGLDSDVTDEELRQSFSQFGNVVSVKIPAGKGCGFVQFSERSAAEDAIEKLNGTVIG 352
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 7/57 (12%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFAN 100
G S+ +IFVG L +VTD LR F S+Y + K+ + KG GFV+F +
Sbjct: 173 GSGSDLSIFVGDLASDVTDTMLRDTFSSRYPSVKGAKVVIDSNTGRSKGYGFVRFDD 229
>gi|297846966|ref|XP_002891364.1| ATRBP47C [Arabidopsis lyrata subsp. lyrata]
gi|297337206|gb|EFH67623.1| ATRBP47C [Arabidopsis lyrata subsp. lyrata]
Length = 443
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/118 (65%), Positives = 88/118 (74%), Gaps = 7/118 (5%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGV CSSR MRIG ATPRK++GYQQQ GGY NGA + EGD+ NTTIFV
Sbjct: 264 MTEMNGVKCSSRAMRIGPATPRKTTGYQQQ----GGYMPNGALTR---PEGDTLNTTIFV 316
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGK 118
GGLD +VTD+DLRQPFS++GEI SVKIPVGKGCGFVQF N A+ + T+ GK
Sbjct: 317 GGLDSSVTDDDLRQPFSEFGEIVSVKIPVGKGCGFVQFVNRPSAEEALEKLNGTVIGK 374
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 10/72 (13%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFVQFANSL 102
E + + +IFVG L P+V+D L + FS+ Y + + K+ + KG GFV+F +
Sbjct: 199 ENNGPDLSIFVGDLAPDVSDTLLHETFSEKYPSVKAAKVVIDANTGRSKGYGFVRFGDEN 258
Query: 103 GQIMA---INGV 111
+ A +NGV
Sbjct: 259 ERTKAMTEMNGV 270
>gi|224286528|gb|ACN40970.1| unknown [Picea sitchensis]
Length = 430
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 72/100 (72%), Positives = 80/100 (80%), Gaps = 2/100 (2%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCS+RPMRI AATPRKS+G Q QYS + G + G+ QG S+ D +NTTIFV
Sbjct: 244 MTEMNGVYCSTRPMRISAATPRKSAGVQHQYSGRAG--NGGSHAQGFPSDNDLNNTTIFV 301
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
G LDPN TDEDLRQ F QYGE+ SVKIPVGKGCGFVQF N
Sbjct: 302 GRLDPNATDEDLRQVFGQYGELVSVKIPVGKGCGFVQFGN 341
>gi|224284226|gb|ACN39849.1| unknown [Picea sitchensis]
Length = 429
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 72/100 (72%), Positives = 80/100 (80%), Gaps = 3/100 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCS+RPMRI AATPRKS+G Q QYS +G + G+ QG S+ D +NTTIFV
Sbjct: 244 MTEMNGVYCSTRPMRISAATPRKSAGVQHQYSGRG---NGGSHAQGFPSDNDLNNTTIFV 300
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
G LDPN TDEDLRQ F QYGE+ SVKIPVGKGCGFVQF N
Sbjct: 301 GRLDPNATDEDLRQVFGQYGELVSVKIPVGKGCGFVQFGN 340
>gi|15220241|ref|NP_175181.1| RNA-binding protein 47C' [Arabidopsis thaliana]
gi|75337808|sp|Q9SX80.1|R47CP_ARATH RecName: Full=Polyadenylate-binding protein RBP47C';
Short=Poly(A)-binding protein RBP47C'; AltName:
Full=RNA-binding protein 47C'; Short=AtRBP47C prime;
Short=AtRBP47C'
gi|5668811|gb|AAD46037.1|AC007519_22 Contains 3 PF|00076 RNA recognition motif domains. EST gb|T20424
comes from this gene [Arabidopsis thaliana]
gi|110743035|dbj|BAE99410.1| hypothetical protein [Arabidopsis thaliana]
gi|124301030|gb|ABN04767.1| At1g47500 [Arabidopsis thaliana]
gi|332194057|gb|AEE32178.1| RNA-binding protein 47C' [Arabidopsis thaliana]
Length = 434
Score = 145 bits (367), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 77/118 (65%), Positives = 89/118 (75%), Gaps = 7/118 (5%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGV CSSR MRIG ATPRK++GYQQQ GGY +GA +SEGD+ NTTIFV
Sbjct: 258 MTEMNGVKCSSRAMRIGPATPRKTNGYQQQ----GGYMPSGA---FTRSEGDTINTTIFV 310
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGK 118
GGLD +VTDEDL+QPFS++GEI SVKIPVGKGCGFVQF N A+ + T+ GK
Sbjct: 311 GGLDSSVTDEDLKQPFSEFGEIVSVKIPVGKGCGFVQFVNRPNAEEALEKLNGTVIGK 368
>gi|356519168|ref|XP_003528246.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 410
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/96 (77%), Positives = 77/96 (80%), Gaps = 9/96 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCSSRPMRIGAATPRK+SGYQQ G SNG Q SE DS+NTTIFV
Sbjct: 230 MTEMNGVYCSSRPMRIGAATPRKTSGYQQ------GSQSNGISSQ---SEADSTNTTIFV 280
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFV 96
GGLD NVT EDL+QPFSQYGEI SVKIPVGKGCGF
Sbjct: 281 GGLDSNVTAEDLKQPFSQYGEIVSVKIPVGKGCGFT 316
>gi|116788528|gb|ABK24911.1| unknown [Picea sitchensis]
Length = 397
Score = 142 bits (357), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 77/122 (63%), Positives = 86/122 (70%), Gaps = 4/122 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGY---ASNGA-PGQGPQSEGDSSNT 56
MTEMNGVYC SRPMRI ATP+KS G QQ YS +G Y A GA GQG QS+ D +NT
Sbjct: 204 MTEMNGVYCCSRPMRINEATPKKSLGLQQSYSMKGNYYTQAYGGAVAGQGFQSDNDPNNT 263
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTME 116
TIFVGGLDPN TDEDLRQ F +GEI VKIPVGKGCGFVQF N A+ + T+
Sbjct: 264 TIFVGGLDPNATDEDLRQVFGPFGEIVYVKIPVGKGCGFVQFTNRSSAEEALQKLHGTII 323
Query: 117 GK 118
G+
Sbjct: 324 GQ 325
>gi|15220233|ref|NP_175180.1| RNA-binding protein 47C [Arabidopsis thaliana]
gi|75337807|sp|Q9SX79.1|RB47C_ARATH RecName: Full=Polyadenylate-binding protein RBP47C;
Short=Poly(A)-binding protein RBP47C; AltName:
Full=RNA-binding protein 47C; Short=AtRBP47C
gi|5668812|gb|AAD46038.1|AC007519_23 Contains 3 PF|00076 RNA recognition motif domains. ESTs gb|R30092,
gb|R30093, gb|AA394338, gb|N65719 and gb|AA597577 come
from this gene [Arabidopsis thaliana]
gi|12744993|gb|AAK06876.1|AF344325_1 putative DNA binding protein [Arabidopsis thaliana]
gi|14334552|gb|AAK59684.1| putative DNA binding protein [Arabidopsis thaliana]
gi|17065624|gb|AAL33806.1| putative DNA binding protein [Arabidopsis thaliana]
gi|332194053|gb|AEE32174.1| RNA-binding protein 47C [Arabidopsis thaliana]
Length = 432
Score = 141 bits (356), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 75/118 (63%), Positives = 86/118 (72%), Gaps = 7/118 (5%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGV CSSR MRIG ATPRK++GYQQQ GGY NG + EGD NTTIFV
Sbjct: 256 MTEMNGVKCSSRAMRIGPATPRKTNGYQQQ----GGYMPNGTLTR---PEGDIMNTTIFV 308
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGK 118
GGLD +VTDEDL+QPF+++GEI SVKIPVGKGCGFVQF N A+ + T+ GK
Sbjct: 309 GGLDSSVTDEDLKQPFNEFGEIVSVKIPVGKGCGFVQFVNRPNAEEALEKLNGTVIGK 366
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 10/72 (13%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFVQFANSL 102
E + + +IFVG L P+V+D L + FS+ Y + + K+ + KG GFV+F +
Sbjct: 191 ENNGPDLSIFVGDLSPDVSDNLLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDEN 250
Query: 103 GQIMA---INGV 111
+ A +NGV
Sbjct: 251 ERTKAMTEMNGV 262
>gi|297852632|ref|XP_002894197.1| hypothetical protein ARALYDRAFT_474095 [Arabidopsis lyrata subsp.
lyrata]
gi|297340039|gb|EFH70456.1| hypothetical protein ARALYDRAFT_474095 [Arabidopsis lyrata subsp.
lyrata]
Length = 450
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/118 (59%), Positives = 87/118 (73%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG +CSSR MR+G ATP++++ Y QQ SQ + G G G S+G+S+N+TIFV
Sbjct: 277 MTEMNGAFCSSRQMRVGIATPKRAAAYGQQNGSQALTLAGGHGGNGSLSDGESNNSTIFV 336
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGK 118
GGLD +VT+EDL QPFSQ+GE+ SVKIPVGKGCGFVQFAN AI + T+ GK
Sbjct: 337 GGLDADVTEEDLMQPFSQFGEVVSVKIPVGKGCGFVQFANRQSAEEAIGNLNGTVIGK 394
>gi|294463675|gb|ADE77364.1| unknown [Picea sitchensis]
Length = 253
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/121 (59%), Positives = 87/121 (71%), Gaps = 4/121 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGY---ASNGAPGQGPQSEGDSSNTT 57
MTEMN VYCS+RPMRI AATP+KS+G+QQQY+ + Y A + P Q QS+ D +NTT
Sbjct: 1 MTEMNNVYCSTRPMRISAATPKKSAGFQQQYTPKVAYQTPAYSAPPAQVFQSD-DQNNTT 59
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEG 117
IFVGGLDP V+DEDLRQ F Q+GE+ VKIPV KGCGFVQF N A+ V T+ G
Sbjct: 60 IFVGGLDPTVSDEDLRQIFGQFGELVYVKIPVNKGCGFVQFGNRACAEEALQRVHGTVIG 119
Query: 118 K 118
+
Sbjct: 120 Q 120
>gi|15222783|ref|NP_175383.1| RNA-binding protein 47A [Arabidopsis thaliana]
gi|378522727|sp|F4I3B3.1|RB47A_ARATH RecName: Full=Polyadenylate-binding protein RBP47A;
Short=Poly(A)-binding protein RBP47A; AltName:
Full=RNA-binding protein 47A; Short=AtRBP47A
gi|332194327|gb|AEE32448.1| RNA-binding protein 47A [Arabidopsis thaliana]
Length = 445
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/118 (58%), Positives = 86/118 (72%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG +CSSR MR+G ATP++++ Y QQ SQ + G G G S+G+S+N+TIFV
Sbjct: 272 MTEMNGAFCSSRQMRVGIATPKRAAAYGQQNGSQALTLAGGHGGNGSMSDGESNNSTIFV 331
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGK 118
GGLD +VT+EDL QPFS +GE+ SVKIPVGKGCGFVQFAN AI + T+ GK
Sbjct: 332 GGLDADVTEEDLMQPFSDFGEVVSVKIPVGKGCGFVQFANRQSAEEAIGNLNGTVIGK 389
>gi|222641726|gb|EEE69858.1| hypothetical protein OsJ_29658 [Oryza sativa Japonica Group]
Length = 310
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/118 (58%), Positives = 84/118 (71%), Gaps = 12/118 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCS+RPMRIG ATPRK+SG ++G G +S+GD +NTT+FV
Sbjct: 136 MTEMNGVYCSTRPMRIGPATPRKTSG------------TSGPTGSAARSDGDLTNTTVFV 183
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGK 118
GGLDPNV+++DLRQ FSQYGEI+SVKIPVGK CGFVQF A+ G+ + GK
Sbjct: 184 GGLDPNVSEDDLRQTFSQYGEISSVKIPVGKQCGFVQFVQRKNAEDALQGLNGSTIGK 241
>gi|350536139|ref|NP_001234487.1| DNA-binding protein [Solanum lycopersicum]
gi|40804404|gb|AAR91698.1| DNA-binding protein [Solanum lycopersicum]
Length = 428
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/121 (58%), Positives = 84/121 (69%), Gaps = 4/121 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ----GGYASNGAPGQGPQSEGDSSNT 56
MTEMNG+YCSSR MRIG ATP+K S QQ + GG+ASNGA Q Q++ D SNT
Sbjct: 237 MTEMNGIYCSSRAMRIGVATPKKPSPMQQYFPQAVILAGGHASNGAATQTSQTDSDLSNT 296
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTME 116
T+FVGGLD VTDE+LRQ FSQ+G + SVKIP GKGCGFVQF+ AI + T+
Sbjct: 297 TVFVGGLDSEVTDEELRQSFSQFGNVVSVKIPAGKGCGFVQFSERSAAEDAIEKLNGTVI 356
Query: 117 G 117
G
Sbjct: 357 G 357
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 7/57 (12%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFAN 100
G S+ +IFVG L +VTD LR F S+Y + K+ + KG GFV+F +
Sbjct: 173 GSGSDLSIFVGDLASDVTDTMLRDTFSSRYPSVKGAKVVIDSNTGRSKGYGFVRFDD 229
>gi|50725189|dbj|BAD33940.1| putative nucleic acid binding protein [Oryza sativa Japonica Group]
gi|51535291|dbj|BAD38554.1| putative nucleic acid binding protein [Oryza sativa Japonica Group]
Length = 316
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/118 (58%), Positives = 84/118 (71%), Gaps = 12/118 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCS+RPMRIG ATPRK+SG ++G G +S+GD +NTT+FV
Sbjct: 142 MTEMNGVYCSTRPMRIGPATPRKTSG------------TSGPTGSAARSDGDLTNTTVFV 189
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGK 118
GGLDPNV+++DLRQ FSQYGEI+SVKIPVGK CGFVQF A+ G+ + GK
Sbjct: 190 GGLDPNVSEDDLRQTFSQYGEISSVKIPVGKQCGFVQFVQRKNAEDALQGLNGSTIGK 247
>gi|215765810|dbj|BAG87507.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 345
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/118 (58%), Positives = 84/118 (71%), Gaps = 12/118 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCS+RPMRIG ATPRK+SG ++G G +S+GD +NTT+FV
Sbjct: 171 MTEMNGVYCSTRPMRIGPATPRKTSG------------TSGPTGSAARSDGDLTNTTVFV 218
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGK 118
GGLDPNV+++DLRQ FSQYGEI+SVKIPVGK CGFVQF A+ G+ + GK
Sbjct: 219 GGLDPNVSEDDLRQTFSQYGEISSVKIPVGKQCGFVQFVQRKNAEDALQGLNGSTIGK 276
>gi|218202287|gb|EEC84714.1| hypothetical protein OsI_31675 [Oryza sativa Indica Group]
Length = 377
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/118 (58%), Positives = 84/118 (71%), Gaps = 12/118 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCS+RPMRIG ATPRK+SG ++G G +S+GD +NTT+FV
Sbjct: 203 MTEMNGVYCSTRPMRIGPATPRKTSG------------TSGPTGSAARSDGDLTNTTVFV 250
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGK 118
GGLDPNV+++DLRQ FSQYGEI+SVKIPVGK CGFVQF A+ G+ + GK
Sbjct: 251 GGLDPNVSEDDLRQTFSQYGEISSVKIPVGKQCGFVQFVQRKNAEDALQGLNGSTIGK 308
>gi|115479619|ref|NP_001063403.1| Os09g0462700 [Oryza sativa Japonica Group]
gi|113631636|dbj|BAF25317.1| Os09g0462700, partial [Oryza sativa Japonica Group]
Length = 441
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/118 (58%), Positives = 84/118 (71%), Gaps = 12/118 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCS+RPMRIG ATPRK+SG ++G G +S+GD +NTT+FV
Sbjct: 267 MTEMNGVYCSTRPMRIGPATPRKTSG------------TSGPTGSAARSDGDLTNTTVFV 314
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGK 118
GGLDPNV+++DLRQ FSQYGEI+SVKIPVGK CGFVQF A+ G+ + GK
Sbjct: 315 GGLDPNVSEDDLRQTFSQYGEISSVKIPVGKQCGFVQFVQRKNAEDALQGLNGSTIGK 372
>gi|224104133|ref|XP_002313332.1| predicted protein [Populus trichocarpa]
gi|222849740|gb|EEE87287.1| predicted protein [Populus trichocarpa]
Length = 415
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/119 (57%), Positives = 84/119 (70%), Gaps = 4/119 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGY---ASNGAPGQGPQSEGDSSNTT 57
MTEMNGV+CS+RPMRI ATP+K++ +QQQY+ + + AP Q ++GD +NTT
Sbjct: 172 MTEMNGVFCSTRPMRISMATPKKTTSFQQQYAVPKAFYPAPAYTAPVQVVSADGDVTNTT 231
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV-GHTM 115
IFVG LDPN T+EDLRQ F Q GEIASVKIP G+GCGFVQFA AI + GH +
Sbjct: 232 IFVGNLDPNATEEDLRQTFLQLGEIASVKIPAGRGCGFVQFATRTSAEEAIQRMQGHVI 290
>gi|255544854|ref|XP_002513488.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223547396|gb|EEF48891.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 412
Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 67/119 (56%), Positives = 84/119 (70%), Gaps = 4/119 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG---YASNGAPGQGPQSEGDSSNTT 57
MTEMNGV+CS+RPMRI AATP+K++ YQQQY++ + AP Q ++ D +NTT
Sbjct: 174 MTEMNGVFCSTRPMRISAATPKKTAAYQQQYATAKAIYPLPAYTAPVQVVPADNDITNTT 233
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV-GHTM 115
IFVG LDPNVT+E+LR F Q+GEI VKIPVG+GCGFVQFA AI + GH +
Sbjct: 234 IFVGNLDPNVTEEELRPIFLQFGEIVYVKIPVGRGCGFVQFATRASAEEAIQRMQGHVI 292
>gi|10120421|gb|AAG13046.1|AC011807_5 Putative RNA binding protein [Arabidopsis thaliana]
Length = 468
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/141 (51%), Positives = 89/141 (63%), Gaps = 23/141 (16%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQG--------------------GYA-- 38
MTEMNG +CSSR MR+G ATP++++ Y QQ SQG G A
Sbjct: 272 MTEMNGAFCSSRQMRVGIATPKRAAAYGQQNGSQGLITCLDALNIASEVNCNVFIGLALT 331
Query: 39 -SNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQ 97
+ G G G S+G+S+N+TIFVGGLD +VT+EDL QPFS +GE+ SVKIPVGKGCGFVQ
Sbjct: 332 LAGGHGGNGSMSDGESNNSTIFVGGLDADVTEEDLMQPFSDFGEVVSVKIPVGKGCGFVQ 391
Query: 98 FANSLGQIMAINGVGHTMEGK 118
FAN AI + T+ GK
Sbjct: 392 FANRQSAEEAIGNLNGTVIGK 412
>gi|297746331|emb|CBI16387.3| unnamed protein product [Vitis vinifera]
Length = 445
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/126 (51%), Positives = 86/126 (68%), Gaps = 5/126 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGA-----PGQGPQSEGDSSN 55
MTEMNGVYCS+RPMRI AATP+K++G+QQQY++ P Q ++ D +N
Sbjct: 193 MTEMNGVYCSTRPMRISAATPKKTTGFQQQYAAAAKALYPAPAYTTPPLQALPADNDINN 252
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTM 115
TTIFVG LDPNVT+E+L+Q FSQ+GE+ VKIP G+GCGFVQF AI + T+
Sbjct: 253 TTIFVGNLDPNVTEEELKQIFSQFGELVYVKIPAGRGCGFVQFGTRTSAEEAIQRMQGTV 312
Query: 116 EGKFMM 121
G+ ++
Sbjct: 313 IGQLVV 318
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 17/79 (21%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGF 95
P GP+ +IFVG L P+VTD L++ F +QY + K+ KG GF
Sbjct: 128 PDAGPEH-------SIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRTKGYGF 180
Query: 96 VQFANSLGQIMA---INGV 111
V+F++ + + A +NGV
Sbjct: 181 VKFSDEMERNRAMTEMNGV 199
>gi|359478387|ref|XP_003632115.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Vitis vinifera]
Length = 438
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/126 (51%), Positives = 86/126 (68%), Gaps = 5/126 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGA-----PGQGPQSEGDSSN 55
MTEMNGVYCS+RPMRI AATP+K++G+QQQY++ P Q ++ D +N
Sbjct: 193 MTEMNGVYCSTRPMRISAATPKKTTGFQQQYAAAAKALYPAPAYTTPPLQALPADNDINN 252
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTM 115
TTIFVG LDPNVT+E+L+Q FSQ+GE+ VKIP G+GCGFVQF AI + T+
Sbjct: 253 TTIFVGNLDPNVTEEELKQIFSQFGELVYVKIPAGRGCGFVQFGTRTSAEEAIQRMQGTV 312
Query: 116 EGKFMM 121
G+ ++
Sbjct: 313 IGQLVV 318
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 17/79 (21%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGF 95
P GP+ +IFVG L P+VTD L++ F +QY + K+ KG GF
Sbjct: 128 PDAGPEH-------SIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRTKGYGF 180
Query: 96 VQFANSLGQIMA---INGV 111
V+F++ + + A +NGV
Sbjct: 181 VKFSDEMERNRAMTEMNGV 199
>gi|225435468|ref|XP_002285479.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Vitis vinifera]
Length = 447
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/126 (51%), Positives = 86/126 (68%), Gaps = 5/126 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGA-----PGQGPQSEGDSSN 55
MTEMNGVYCS+RPMRI AATP+K++G+QQQY++ P Q ++ D +N
Sbjct: 193 MTEMNGVYCSTRPMRISAATPKKTTGFQQQYAAAAKALYPAPAYTTPPLQALPADNDINN 252
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTM 115
TTIFVG LDPNVT+E+L+Q FSQ+GE+ VKIP G+GCGFVQF AI + T+
Sbjct: 253 TTIFVGNLDPNVTEEELKQIFSQFGELVYVKIPAGRGCGFVQFGTRTSAEEAIQRMQGTV 312
Query: 116 EGKFMM 121
G+ ++
Sbjct: 313 IGQLVV 318
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 17/79 (21%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGF 95
P GP+ +IFVG L P+VTD L++ F +QY + K+ KG GF
Sbjct: 128 PDAGPEH-------SIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRTKGYGF 180
Query: 96 VQFANSLGQIMA---INGV 111
V+F++ + + A +NGV
Sbjct: 181 VKFSDEMERNRAMTEMNGV 199
>gi|226492692|ref|NP_001144988.1| uncharacterized protein LOC100278143 [Zea mays]
gi|195649537|gb|ACG44236.1| hypothetical protein [Zea mays]
Length = 436
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/118 (61%), Positives = 82/118 (69%), Gaps = 11/118 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCSSRPMRIG ATPRKSSG S S+G GD +NTT+FV
Sbjct: 258 MTEMNGVYCSSRPMRIGPATPRKSSGTSGSNGSAA--RSDG---------GDLTNTTVFV 306
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGK 118
GGLDPNV++EDLRQ FSQYGEI+SVKIP+GK CGFVQFA A+ G+ + GK
Sbjct: 307 GGLDPNVSEEDLRQTFSQYGEISSVKIPIGKQCGFVQFAQRKNAEDALQGLNGSTIGK 364
>gi|194707750|gb|ACF87959.1| unknown [Zea mays]
gi|414885794|tpg|DAA61808.1| TPA: hypothetical protein ZEAMMB73_995180 [Zea mays]
Length = 433
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/118 (61%), Positives = 82/118 (69%), Gaps = 11/118 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCSSRPMRIG ATPRKSSG S S+G GD +NTT+FV
Sbjct: 255 MTEMNGVYCSSRPMRIGPATPRKSSGTSGSNGSAA--RSDG---------GDLTNTTVFV 303
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGK 118
GGLDPNV++EDLRQ FSQYGEI+SVKIP+GK CGFVQFA A+ G+ + GK
Sbjct: 304 GGLDPNVSEEDLRQTFSQYGEISSVKIPIGKQCGFVQFAQRKNAEDALQGLNGSTIGK 361
>gi|194697962|gb|ACF83065.1| unknown [Zea mays]
gi|414885795|tpg|DAA61809.1| TPA: hypothetical protein ZEAMMB73_995180 [Zea mays]
Length = 320
Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/118 (61%), Positives = 82/118 (69%), Gaps = 11/118 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCSSRPMRIG ATPRKSSG S S+G GD +NTT+FV
Sbjct: 142 MTEMNGVYCSSRPMRIGPATPRKSSGTSGSNGSAA--RSDG---------GDLTNTTVFV 190
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGK 118
GGLDPNV++EDLRQ FSQYGEI+SVKIP+GK CGFVQFA A+ G+ + GK
Sbjct: 191 GGLDPNVSEEDLRQTFSQYGEISSVKIPIGKQCGFVQFAQRKNAEDALQGLNGSTIGK 248
>gi|357158812|ref|XP_003578248.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 431
Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/118 (58%), Positives = 81/118 (68%), Gaps = 12/118 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCS+RPMRIG ATPRKSSG S +S+GD +NTT+FV
Sbjct: 256 MTEMNGVYCSTRPMRIGPATPRKSSGNSGSTGSSA------------RSDGDLTNTTVFV 303
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGK 118
GGLDPNV+++DLRQ FSQYGEI+SVKIPVGK CGFVQF A+ G+ + GK
Sbjct: 304 GGLDPNVSEDDLRQSFSQYGEISSVKIPVGKQCGFVQFLQRKNAEDALQGLNGSTIGK 361
>gi|449469386|ref|XP_004152401.1| PREDICTED: polyadenylate-binding protein RBP47B'-like [Cucumis
sativus]
Length = 422
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/125 (54%), Positives = 83/125 (66%), Gaps = 11/125 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQ-----SEGDSSN 55
M+EMNGVYCS+RPMRI AATP+K+ G QQQYS G A P ++ D++N
Sbjct: 172 MSEMNGVYCSTRPMRISAATPKKTIGVQQQYSL--GKAMYPVPAYTTSVPVLPADYDANN 229
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTM 115
TTIFVG LDPN+T+E+L+Q F Q+GEIA VKIP GKGCGFVQF AI M
Sbjct: 230 TTIFVGNLDPNITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAI----QKM 285
Query: 116 EGKFM 120
+GK +
Sbjct: 286 QGKII 290
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 14/66 (21%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGF 95
P GP+ +IFVG L P+VTD L++ F +QY + K+ KG GF
Sbjct: 107 PDAGPEH-------SIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGF 159
Query: 96 VQFANS 101
V+FA+
Sbjct: 160 VKFADE 165
>gi|212722984|ref|NP_001132004.1| uncharacterized protein LOC100193409 [Zea mays]
gi|194693170|gb|ACF80669.1| unknown [Zea mays]
Length = 422
Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/118 (60%), Positives = 81/118 (68%), Gaps = 11/118 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCSSRPMRIG ATPRKSSG S +G GD +NTT+FV
Sbjct: 244 MTEMNGVYCSSRPMRIGPATPRKSSGTSGSNGSSA--RPDG---------GDLTNTTVFV 292
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGK 118
GGLDP+V++EDLRQ FSQYGEI+SVKIPVGK CGFVQFA A+ G+ + GK
Sbjct: 293 GGLDPDVSEEDLRQAFSQYGEISSVKIPVGKQCGFVQFAQRKNAEDALQGLNGSTIGK 350
>gi|116789456|gb|ABK25253.1| unknown [Picea sitchensis]
Length = 487
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 65/118 (55%), Positives = 81/118 (68%), Gaps = 4/118 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG++CSSRPMR G AT +K++G+QQ Y A+ P Q S+ D +NTTIFV
Sbjct: 231 MTEMNGMFCSSRPMRTGPATTKKTTGFQQPYPK----AAAAVPPQVVASDNDPNNTTIFV 286
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGK 118
GGLDP+VTDE LRQ F Q+GE+ VKIPVGK CGFVQF N A+ + T+ G+
Sbjct: 287 GGLDPSVTDEMLRQLFGQFGELVHVKIPVGKRCGFVQFNNRASAEEALQMLHGTVLGQ 344
>gi|326495566|dbj|BAJ85879.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 479
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/118 (57%), Positives = 81/118 (68%), Gaps = 12/118 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCS+RPMRIG ATPRKSSG S +S+GD +NTT+FV
Sbjct: 305 MTEMNGVYCSTRPMRIGPATPRKSSGTSGSTGSSA------------RSDGDLTNTTVFV 352
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGK 118
GGLDPNV+++DL+Q FSQYGEI+SVKIPVGK CGFVQF A+ G+ + GK
Sbjct: 353 GGLDPNVSEDDLKQTFSQYGEISSVKIPVGKQCGFVQFLQRKNAEDALQGLNGSTIGK 410
>gi|414589689|tpg|DAA40260.1| TPA: hypothetical protein ZEAMMB73_589753 [Zea mays]
Length = 424
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/118 (60%), Positives = 81/118 (68%), Gaps = 11/118 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCSSRPMRIG ATPRKSSG S +G GD +NTT+FV
Sbjct: 244 MTEMNGVYCSSRPMRIGPATPRKSSGTSGSNGSSA--RPDG---------GDLTNTTVFV 292
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGK 118
GGLDP+V++EDLRQ FSQYGEI+SVKIPVGK CGFVQFA A+ G+ + GK
Sbjct: 293 GGLDPDVSEEDLRQAFSQYGEISSVKIPVGKQCGFVQFAQRKNAEDALQGLNGSTIGK 350
>gi|219888851|gb|ACL54800.1| unknown [Zea mays]
gi|414589690|tpg|DAA40261.1| TPA: hypothetical protein ZEAMMB73_589753 [Zea mays]
Length = 322
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/118 (59%), Positives = 79/118 (66%), Gaps = 11/118 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCSSRPMRIG ATPRKSSG S GD +NTT+FV
Sbjct: 142 MTEMNGVYCSSRPMRIGPATPRKSSGTSGSNGSSA-----------RPDGGDLTNTTVFV 190
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGK 118
GGLDP+V++EDLRQ FSQYGEI+SVKIPVGK CGFVQFA A+ G+ + GK
Sbjct: 191 GGLDPDVSEEDLRQAFSQYGEISSVKIPVGKQCGFVQFAQRKNAEDALQGLNGSTIGK 248
>gi|357149687|ref|XP_003575198.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 421
Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/118 (51%), Positives = 83/118 (70%), Gaps = 13/118 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCS+RP+RIG ATPR++SG S +P + QS+GD +N T++V
Sbjct: 251 MTEMNGVYCSTRPIRIGPATPRRTSG-----------DSGSSPPR--QSDGDLTNRTVYV 297
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGK 118
GGLDPNV++++LR+ F++YG++ASVKIPVGK CGFVQF N A+ + + GK
Sbjct: 298 GGLDPNVSEDELRKTFAKYGDVASVKIPVGKQCGFVQFVNRADAEEALQALSGSTIGK 355
>gi|375152130|gb|AFA36523.1| nucleic acid binding protein, partial [Lolium perenne]
Length = 164
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/123 (47%), Positives = 87/123 (70%), Gaps = 14/123 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG+YCS+RP+RIG ATPR++ G + + PG S+GDS+N T++V
Sbjct: 35 MTEMNGIYCSTRPIRIGPATPRRT-----------GDSGSSTPGH---SDGDSTNRTVYV 80
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGKFM 120
GGLDPNV++++LR+ F++YG++ASVKIP+GK CGFVQ+ N A+ G+ ++ GK +
Sbjct: 81 GGLDPNVSEDELRKAFAKYGDVASVKIPLGKQCGFVQYVNRTDAKEALQGLNGSVIGKQV 140
Query: 121 MVM 123
+ +
Sbjct: 141 VRL 143
>gi|242042043|ref|XP_002468416.1| hypothetical protein SORBIDRAFT_01g045570 [Sorghum bicolor]
gi|241922270|gb|EER95414.1| hypothetical protein SORBIDRAFT_01g045570 [Sorghum bicolor]
Length = 415
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 81/122 (66%), Gaps = 4/122 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPG----QGPQSEGDSSNT 56
MTEMNGVYCS+RPMRI AA P+KS+G Q QYS+ A Q + D +NT
Sbjct: 167 MTEMNGVYCSTRPMRISAAIPKKSTGSQLQYSAAKAVYPATAYAMPQLQAVLPDSDPTNT 226
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTME 116
TIF+G LDPNVT+++LRQ Q+GE+ VKIPVGKGCGFVQ+A+ A+ + TM
Sbjct: 227 TIFIGNLDPNVTEDELRQICVQFGELIYVKIPVGKGCGFVQYASRASAEEAVQRLHGTMI 286
Query: 117 GK 118
G+
Sbjct: 287 GQ 288
>gi|357113824|ref|XP_003558701.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 418
Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 84/122 (68%), Gaps = 4/122 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQY-SSQGGY--ASNGAPGQGPQ-SEGDSSNT 56
M+EMNGVYCS+RPMRI AA P+KSSG Q QY +++ Y A+ P P + D +NT
Sbjct: 169 MSEMNGVYCSTRPMRISAAIPKKSSGSQLQYGTAKAMYPAAAYAVPQAQPALPDSDLTNT 228
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTME 116
TIF+G LDPN T+E+LRQ Q+GE+ VKIPVGKGCGFVQ+A+ A+ + TM
Sbjct: 229 TIFIGNLDPNATEEELRQLCVQFGELIYVKIPVGKGCGFVQYASRASAEEAVQRLHGTMI 288
Query: 117 GK 118
G+
Sbjct: 289 GQ 290
>gi|357163840|ref|XP_003579863.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 428
Score = 122 bits (305), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 84/118 (71%), Gaps = 13/118 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCS+RP+RIG ATPR+++G + + PG S+GDS+N T++V
Sbjct: 256 MTEMNGVYCSTRPIRIGPATPRRTAGD----------SGSSTPGH---SDGDSTNRTVYV 302
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGK 118
GGLDPNV++++LR+ F++YG++ASVKIP GK CGFVQ+ N A+ G+ ++ GK
Sbjct: 303 GGLDPNVSEDELRKSFAKYGDVASVKIPQGKQCGFVQYVNRTDAEEALQGLNGSVIGK 360
>gi|212275334|ref|NP_001130489.1| uncharacterized protein LOC100191587 [Zea mays]
gi|194689276|gb|ACF78722.1| unknown [Zea mays]
Length = 417
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 83/118 (70%), Gaps = 13/118 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCS+RP+R+G ATPR+S G S +P + QS+ DS+N T++V
Sbjct: 245 MTEMNGVYCSTRPIRVGLATPRRSQG-----------DSGSSPPR--QSDVDSTNRTVYV 291
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGK 118
GGLDPNV++++LR+ F++YG++ASVKIP GK CGFVQF N + A+ G+ + GK
Sbjct: 292 GGLDPNVSEDELRKAFAKYGDLASVKIPFGKQCGFVQFVNRVDAEEALQGLNGSTIGK 349
>gi|238005936|gb|ACR34003.1| unknown [Zea mays]
gi|414865083|tpg|DAA43640.1| TPA: RNA-binding post-transcriptional regulator csx1 [Zea mays]
Length = 415
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/122 (51%), Positives = 80/122 (65%), Gaps = 4/122 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPG----QGPQSEGDSSNT 56
MTEMNGVYCS+RPMRI AA P+KS+G Q QYS+ A Q + D +NT
Sbjct: 167 MTEMNGVYCSTRPMRISAAIPKKSTGSQLQYSAAKAVYPATAYAMPQLQAVLPDSDPTNT 226
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTME 116
TIF+G LDPNV +++LRQ Q+GE+ VKIPVGKGCGFVQ+A+ A+ + TM
Sbjct: 227 TIFIGNLDPNVIEDELRQICVQFGELIYVKIPVGKGCGFVQYASRASAEEAVQRLHGTMI 286
Query: 117 GK 118
G+
Sbjct: 287 GQ 288
>gi|226506980|ref|NP_001152183.1| LOC100285821 [Zea mays]
gi|195653617|gb|ACG46276.1| RNA-binding post-transcriptional regulator csx1 [Zea mays]
Length = 415
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/122 (51%), Positives = 80/122 (65%), Gaps = 4/122 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPG----QGPQSEGDSSNT 56
MTEMNGVYCS+RPMRI AA P+KS+G Q QYS+ A Q + D +NT
Sbjct: 167 MTEMNGVYCSTRPMRISAAIPKKSTGSQLQYSAAKAVYPATAYAMPQLQAVLPDSDPTNT 226
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTME 116
TIF+G LDPNV +++LRQ Q+GE+ VKIPVGKGCGFVQ+A+ A+ + TM
Sbjct: 227 TIFIGNLDPNVIEDELRQICVQFGELIYVKIPVGKGCGFVQYASRASAEEAVQRLHGTMI 286
Query: 117 GK 118
G+
Sbjct: 287 GQ 288
>gi|413922759|gb|AFW62691.1| hypothetical protein ZEAMMB73_026342 [Zea mays]
Length = 430
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 83/118 (70%), Gaps = 13/118 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCS+RP+R+G ATPR+S G S +P + QS DS+N T++V
Sbjct: 256 MTEMNGVYCSTRPIRVGPATPRRSQG-----------DSGTSPPR--QSHVDSTNRTVYV 302
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGK 118
GGLDPNV++++LR+ F++YG++ASVKIP GK CGFVQF N + A++G+ + GK
Sbjct: 303 GGLDPNVSEDELRKAFAKYGDLASVKIPFGKQCGFVQFVNRVDAEEALHGLNGSTIGK 360
>gi|222623094|gb|EEE57226.1| hypothetical protein OsJ_07197 [Oryza sativa Japonica Group]
Length = 459
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/127 (48%), Positives = 83/127 (65%), Gaps = 9/127 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRK-----SSGY----QQQYSSQGGYASNGAPGQGPQSEG 51
MTEMNG YCS+RP+RIG ATPR +S Y + + + G Y + QS+
Sbjct: 267 MTEMNGAYCSTRPIRIGPATPRDLQPTSASAYGLVAKARANIWGEYVGDSGSSPPRQSDS 326
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
DS+N TI+VGGLDPN T+++LR+ F++YG++ASVKIPVGK CGFVQF N A+ G+
Sbjct: 327 DSTNRTIYVGGLDPNATEDELRKAFAKYGDLASVKIPVGKQCGFVQFVNRPDAEEALQGL 386
Query: 112 GHTMEGK 118
+ GK
Sbjct: 387 NGSTIGK 393
>gi|222640040|gb|EEE68172.1| hypothetical protein OsJ_26296 [Oryza sativa Japonica Group]
Length = 329
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/100 (60%), Positives = 73/100 (73%), Gaps = 10/100 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG+ CSSRPMRIG A +K++G Q++ S QG QS+ D SNTTIFV
Sbjct: 139 MTEMNGMVCSSRPMRIGPAANKKATGVQEKVPS----------AQGVQSDSDPSNTTIFV 188
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
GGLDP+VTD+ L+Q F+ YG++ VKIPVGK CGFVQFAN
Sbjct: 189 GGLDPSVTDDMLKQVFTPYGDVVHVKIPVGKRCGFVQFAN 228
>gi|222629596|gb|EEE61728.1| hypothetical protein OsJ_16246 [Oryza sativa Japonica Group]
Length = 607
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/110 (55%), Positives = 77/110 (70%), Gaps = 12/110 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG+ CSSRPMRIG A +K++G Q++ + QG QSE D +NTTIFV
Sbjct: 188 MTEMNGMLCSSRPMRIGPAANKKTTGVQERVPN----------AQGAQSENDPNNTTIFV 237
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN--SLGQIMAI 108
GGLDPNVT++ L+Q F+ YGE+ VKIPVGK CGFVQ+ N S Q +A+
Sbjct: 238 GGLDPNVTEDVLKQVFAPYGEVVHVKIPVGKRCGFVQYVNRPSAEQALAV 287
>gi|449454734|ref|XP_004145109.1| PREDICTED: polyadenylate-binding protein RBP45B-like [Cucumis
sativus]
Length = 404
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/100 (64%), Positives = 73/100 (73%), Gaps = 6/100 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGV+CSSRPMRIG A + +SG QQ S+ Y + QG Q+E D +NTTIFV
Sbjct: 216 MTEMNGVHCSSRPMRIGPAANKNTSGGQQ--FSKTSYQN----PQGAQNENDPNNTTIFV 269
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
G LD NVTDE LRQ F QYGE+ VKIPVGK CGFVQFA+
Sbjct: 270 GNLDANVTDEHLRQVFGQYGELVHVKIPVGKRCGFVQFAD 309
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 10/76 (13%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQF 98
G + + DS + TIFVG L +VTD L++ F ++Y + K+ + KG GFV+F
Sbjct: 147 GEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVKF 206
Query: 99 ANSLGQIMA---INGV 111
+ Q+ A +NGV
Sbjct: 207 GDESEQMRAMTEMNGV 222
>gi|40253807|dbj|BAD05744.1| putative RNA Binding Protein 45 [Oryza sativa Japonica Group]
gi|40253847|dbj|BAD05783.1| putative RNA Binding Protein 45 [Oryza sativa Japonica Group]
Length = 427
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/100 (60%), Positives = 73/100 (73%), Gaps = 10/100 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG+ CSSRPMRIG A +K++G Q++ S QG QS+ D SNTTIFV
Sbjct: 244 MTEMNGMVCSSRPMRIGPAANKKATGVQEKVPS----------AQGVQSDSDPSNTTIFV 293
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
GGLDP+VTD+ L+Q F+ YG++ VKIPVGK CGFVQFAN
Sbjct: 294 GGLDPSVTDDMLKQVFTPYGDVVHVKIPVGKRCGFVQFAN 333
>gi|242062048|ref|XP_002452313.1| hypothetical protein SORBIDRAFT_04g023540 [Sorghum bicolor]
gi|241932144|gb|EES05289.1| hypothetical protein SORBIDRAFT_04g023540 [Sorghum bicolor]
Length = 435
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 81/118 (68%), Gaps = 13/118 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCS+RP+R+G ATPR+S G S +P + QS+ DS+N T++V
Sbjct: 261 MTEMNGVYCSTRPIRVGPATPRRSQG-----------DSGSSPPR--QSDVDSTNRTVYV 307
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGK 118
GGLDPNV++++LR+ F++YG++ASVKIP GK CGFVQF N A+ G+ GK
Sbjct: 308 GGLDPNVSEDELRKAFAKYGDLASVKIPFGKQCGFVQFVNRADAEEALQGLNGATIGK 365
>gi|326528543|dbj|BAJ93453.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 416
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/122 (51%), Positives = 83/122 (68%), Gaps = 4/122 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQY-SSQGGYASNGAP---GQGPQSEGDSSNT 56
M+EMNGVYCS+RPMRI AA P+KSSG Q QY +++ Y + Q + D +NT
Sbjct: 169 MSEMNGVYCSTRPMRISAAIPKKSSGSQLQYGAAKAMYPATAYAIPQAQTVLPDSDLTNT 228
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTME 116
TIF+G LDPNVT+E+LRQ Q+GE+ VKIPVGKGCGFVQ+A+ A+ + T+
Sbjct: 229 TIFIGNLDPNVTEEELRQICVQFGELIYVKIPVGKGCGFVQYASRASAEEAVQRLHGTVI 288
Query: 117 GK 118
G+
Sbjct: 289 GQ 290
>gi|125549823|gb|EAY95645.1| hypothetical protein OsI_17510 [Oryza sativa Indica Group]
Length = 426
Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 61/110 (55%), Positives = 77/110 (70%), Gaps = 12/110 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG+ CSSRPMRIG A +K++G Q++ + QG QSE D +NTTIFV
Sbjct: 240 MTEMNGMLCSSRPMRIGPAANKKTTGVQERVPN----------AQGAQSENDPNNTTIFV 289
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN--SLGQIMAI 108
GGLDPNVT++ L+Q F+ YGE+ VKIPVGK CGFVQ+ N S Q +A+
Sbjct: 290 GGLDPNVTEDVLKQVFAPYGEVVHVKIPVGKRCGFVQYVNRPSAEQALAV 339
>gi|115460682|ref|NP_001053941.1| Os04g0625800 [Oryza sativa Japonica Group]
gi|113565512|dbj|BAF15855.1| Os04g0625800 [Oryza sativa Japonica Group]
gi|215767966|dbj|BAH00195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 425
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 61/110 (55%), Positives = 77/110 (70%), Gaps = 12/110 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG+ CSSRPMRIG A +K++G Q++ + QG QSE D +NTTIFV
Sbjct: 239 MTEMNGMLCSSRPMRIGPAANKKTTGVQERVPN----------AQGAQSENDPNNTTIFV 288
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN--SLGQIMAI 108
GGLDPNVT++ L+Q F+ YGE+ VKIPVGK CGFVQ+ N S Q +A+
Sbjct: 289 GGLDPNVTEDVLKQVFAPYGEVVHVKIPVGKRCGFVQYVNRPSAEQALAV 338
>gi|39545835|emb|CAE04743.3| OSJNBb0060E08.6 [Oryza sativa Japonica Group]
gi|116309791|emb|CAH66831.1| OSIGBa0148A10.8 [Oryza sativa Indica Group]
Length = 414
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 61/110 (55%), Positives = 77/110 (70%), Gaps = 12/110 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG+ CSSRPMRIG A +K++G Q++ + QG QSE D +NTTIFV
Sbjct: 228 MTEMNGMLCSSRPMRIGPAANKKTTGVQERVPN----------AQGAQSENDPNNTTIFV 277
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN--SLGQIMAI 108
GGLDPNVT++ L+Q F+ YGE+ VKIPVGK CGFVQ+ N S Q +A+
Sbjct: 278 GGLDPNVTEDVLKQVFAPYGEVVHVKIPVGKRCGFVQYVNRPSAEQALAV 327
>gi|218193173|gb|EEC75600.1| hypothetical protein OsI_12307 [Oryza sativa Indica Group]
Length = 406
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/108 (59%), Positives = 77/108 (71%), Gaps = 6/108 (5%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG YCSSRPMRIG A+ +K+ G QQQ S+ Y + QG S+ D +NTT+FV
Sbjct: 219 MTEMNGQYCSSRPMRIGPASNKKNIGGQQQPSAT--YQNT----QGTDSDSDPNNTTVFV 272
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
GGLDP+VTDE L+Q FS YGE+ VKIPVGK CGFVQ++N AI
Sbjct: 273 GGLDPSVTDEVLKQAFSPYGELVYVKIPVGKRCGFVQYSNRASAEEAI 320
>gi|108709398|gb|ABF97193.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 406
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/108 (59%), Positives = 77/108 (71%), Gaps = 6/108 (5%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG YCSSRPMRIG A+ +K+ G QQQ S+ Y + QG S+ D +NTT+FV
Sbjct: 219 MTEMNGQYCSSRPMRIGPASNKKNIGGQQQPSAT--YQNT----QGTDSDSDPNNTTVFV 272
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
GGLDP+VTDE L+Q FS YGE+ VKIPVGK CGFVQ++N AI
Sbjct: 273 GGLDPSVTDEVLKQAFSPYGELVYVKIPVGKRCGFVQYSNRASAEEAI 320
>gi|148910710|gb|ABR18422.1| unknown [Picea sitchensis]
Length = 418
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/118 (55%), Positives = 81/118 (68%), Gaps = 3/118 (2%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG++CSSRPMR G AT +K++G+QQ Y A+ P Q S+ D +NTTIFV
Sbjct: 231 MTEMNGMFCSSRPMRTGPATTKKTTGFQQPYPKA---AAAAVPPQVVASDNDPNNTTIFV 287
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGK 118
GGLDP+VTDE LRQ F Q+GE+ VKIPVGK CGFVQF N A+ + T+ G+
Sbjct: 288 GGLDPSVTDEMLRQLFGQFGELVHVKIPVGKRCGFVQFNNRASAEEALQMLHGTVLGQ 345
>gi|168064363|ref|XP_001784132.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664332|gb|EDQ51056.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 453
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/108 (55%), Positives = 73/108 (67%), Gaps = 9/108 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQ--------QYSSQGGYASNGAPGQGPQSEGD 52
M+EMNG+YCSSRPMRI AATP+KS G Q ++ Y + +P P ++ D
Sbjct: 195 MSEMNGIYCSSRPMRISAATPKKSLGPNQLNPKVSPVAVATYAAYGAQPSPQAFP-TDND 253
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
+NTTIFVGGLDP V DEDLR F Q+GE+ VKIP GKGCGFVQF +
Sbjct: 254 PNNTTIFVGGLDPAVGDEDLRNVFGQFGELVYVKIPAGKGCGFVQFTH 301
>gi|12583812|gb|AAG59664.1|AC084319_22 putative RNA binding protein [Oryza sativa Japonica Group]
gi|108709397|gb|ABF97192.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|215678704|dbj|BAG95141.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 402
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/108 (59%), Positives = 77/108 (71%), Gaps = 6/108 (5%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG YCSSRPMRIG A+ +K+ G QQQ S+ Y + QG S+ D +NTT+FV
Sbjct: 219 MTEMNGQYCSSRPMRIGPASNKKNIGGQQQPSAT--YQNT----QGTDSDSDPNNTTVFV 272
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
GGLDP+VTDE L+Q FS YGE+ VKIPVGK CGFVQ++N AI
Sbjct: 273 GGLDPSVTDEVLKQAFSPYGELVYVKIPVGKRCGFVQYSNRASAEEAI 320
>gi|115453831|ref|NP_001050516.1| Os03g0569900 [Oryza sativa Japonica Group]
gi|113548987|dbj|BAF12430.1| Os03g0569900, partial [Oryza sativa Japonica Group]
Length = 446
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/108 (59%), Positives = 77/108 (71%), Gaps = 6/108 (5%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG YCSSRPMRIG A+ +K+ G QQQ S+ Y + QG S+ D +NTT+FV
Sbjct: 263 MTEMNGQYCSSRPMRIGPASNKKNIGGQQQPSAT--YQNT----QGTDSDSDPNNTTVFV 316
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
GGLDP+VTDE L+Q FS YGE+ VKIPVGK CGFVQ++N AI
Sbjct: 317 GGLDPSVTDEVLKQAFSPYGELVYVKIPVGKRCGFVQYSNRASAEEAI 364
>gi|357166074|ref|XP_003580589.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Brachypodium distachyon]
Length = 426
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/100 (59%), Positives = 72/100 (72%), Gaps = 8/100 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG+ CSSRPMRIG A RK++G Q++ + QG QS+ D +NTTIFV
Sbjct: 237 MTEMNGMPCSSRPMRIGPAANRKTTGVQERVPNTNT--------QGAQSDNDPNNTTIFV 288
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
GGLDPNVT++ L+Q F+ YGE+ VKIPVGK CGFVQF N
Sbjct: 289 GGLDPNVTEDALKQVFAPYGEVIHVKIPVGKRCGFVQFVN 328
>gi|225461001|ref|XP_002280601.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Vitis vinifera]
Length = 417
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/117 (57%), Positives = 76/117 (64%), Gaps = 6/117 (5%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
M EMNG++CS+RPMRIG A +K G QQ Q N QG Q E D +NTTIFV
Sbjct: 242 MNEMNGMFCSTRPMRIGPAATKKPVGGQQ---FQKASFQNT---QGNQGESDPNNTTIFV 295
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEG 117
GGLD NVTD+ LRQ FSQYGE+ VKIPVGK CGFVQFAN A+ G+ T G
Sbjct: 296 GGLDSNVTDDYLRQVFSQYGELVHVKIPVGKRCGFVQFANRACAEQALAGLNGTQLG 352
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFV 96
G G + D+ + TIFVG L +VTD L++ F Y + K+ KG GFV
Sbjct: 171 GAGERRADDTPDYTIFVGDLASDVTDYVLQETFRGHYPSVKGAKVVTDRTTGRSKGYGFV 230
Query: 97 QFANSLGQIMAIN 109
+F + Q+ A+N
Sbjct: 231 RFGDEGEQLRAMN 243
>gi|242074396|ref|XP_002447134.1| hypothetical protein SORBIDRAFT_06g029180 [Sorghum bicolor]
gi|241938317|gb|EES11462.1| hypothetical protein SORBIDRAFT_06g029180 [Sorghum bicolor]
Length = 440
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/100 (61%), Positives = 69/100 (69%), Gaps = 10/100 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPG-QGPQSEGDSSNTTIF 59
MTEMNG+ CSSRPMRIG A RK++G G P QG QSE D +NTTIF
Sbjct: 241 MTEMNGMPCSSRPMRIGPAASRKNTG---------GVVQERVPNSQGAQSENDPNNTTIF 291
Query: 60 VGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
VGGLDPNVT++ L+Q FS YGE+ VKIPVGK CGFVQF
Sbjct: 292 VGGLDPNVTEDTLKQVFSPYGEVVHVKIPVGKRCGFVQFV 331
>gi|449454730|ref|XP_004145107.1| PREDICTED: polyadenylate-binding protein RBP45-like [Cucumis
sativus]
gi|449472157|ref|XP_004153511.1| PREDICTED: polyadenylate-binding protein RBP45-like [Cucumis
sativus]
Length = 408
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/100 (63%), Positives = 73/100 (73%), Gaps = 6/100 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGV+CSSRPMRIG A + +SG QQ S+ Y + PG Q+E D +NTTIFV
Sbjct: 216 MTEMNGVHCSSRPMRIGPAANKNTSGSQQ--FSKTSYQN--PPGT--QNENDPNNTTIFV 269
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
G LD NVTDE LRQ FSQYGE+ VKIP GK CGFVQF++
Sbjct: 270 GNLDSNVTDEHLRQVFSQYGELVHVKIPAGKRCGFVQFSD 309
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 10/76 (13%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQF 98
G + + DS + TIFVG L +VTD L++ F ++Y + K+ + KG GFV+F
Sbjct: 147 GEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVKF 206
Query: 99 ANSLGQIMA---INGV 111
+ QI A +NGV
Sbjct: 207 GDESEQIRAMTEMNGV 222
>gi|293336608|ref|NP_001168401.1| uncharacterized protein LOC100382170 [Zea mays]
gi|223948043|gb|ACN28105.1| unknown [Zea mays]
gi|414585352|tpg|DAA35923.1| TPA: hypothetical protein ZEAMMB73_028165 [Zea mays]
Length = 432
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/100 (61%), Positives = 69/100 (69%), Gaps = 10/100 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPG-QGPQSEGDSSNTTIF 59
MTEMNG+ CSSRPMRIG A RK++G G P QG QSE D +NTTIF
Sbjct: 241 MTEMNGMPCSSRPMRIGPAASRKNTG---------GVVQERVPNSQGAQSENDPNNTTIF 291
Query: 60 VGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
VGGLDPNVT++ L+Q FS YGE+ VKIPVGK CGFVQF
Sbjct: 292 VGGLDPNVTEDTLKQVFSPYGEVVHVKIPVGKRCGFVQFV 331
>gi|326513006|dbj|BAK03410.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326525779|dbj|BAJ88936.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 436
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/100 (59%), Positives = 72/100 (72%), Gaps = 6/100 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG+ CSSRPMRIG A RK++G Q++ QG QS+ D +NTTIFV
Sbjct: 240 MTEMNGMPCSSRPMRIGPAANRKTTGVQERVPIPNTNT------QGAQSDNDPNNTTIFV 293
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
GGLDPNVT++ L+Q F+ YGE+ VKIPVGK CGFVQ+AN
Sbjct: 294 GGLDPNVTEDALKQVFAPYGEVVHVKIPVGKRCGFVQYAN 333
>gi|242073268|ref|XP_002446570.1| hypothetical protein SORBIDRAFT_06g018280 [Sorghum bicolor]
gi|241937753|gb|EES10898.1| hypothetical protein SORBIDRAFT_06g018280 [Sorghum bicolor]
Length = 423
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/118 (52%), Positives = 85/118 (72%), Gaps = 13/118 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
M+EMNGVYCS+RP+RIG ATPR+SSG + PG S+GDSSN T++V
Sbjct: 253 MSEMNGVYCSTRPIRIGPATPRRSSGDSGSST----------PGH---SDGDSSNRTVYV 299
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGK 118
GGLDPNV++++LR+ F++YG++ASVKIP+GK CGFVQFA+ A+ G+ ++ GK
Sbjct: 300 GGLDPNVSEDELRKAFAKYGDLASVKIPLGKQCGFVQFASRTDAEEALQGLNGSLIGK 357
>gi|147859325|emb|CAN83958.1| hypothetical protein VITISV_039907 [Vitis vinifera]
Length = 410
Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/117 (54%), Positives = 74/117 (63%), Gaps = 12/117 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
M EMNG++CS+RPMRIG A +K G Q + QG Q E D +NTTIFV
Sbjct: 227 MNEMNGMFCSTRPMRIGPAATKKPVGASFQNT------------QGXQGESDPNNTTIFV 274
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEG 117
GGLD NVTD+ LRQ FSQYGE+ VKIPVGK CGFVQFAN A+ G+ T G
Sbjct: 275 GGLDSNVTDDYLRQVFSQYGELVHVKIPVGKRCGFVQFANRACAEQALAGLNGTQLG 331
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFV 96
G G + D+ + TIFVG L +VTD L++ F Y + K+ KG GFV
Sbjct: 156 GAGERRADDTPDYTIFVGDLASDVTDYVLQETFRGHYPSVKGAKVVTDRTTGRSKGYGFV 215
Query: 97 QFANSLGQIMAIN 109
+F + Q+ A+N
Sbjct: 216 RFGDEGEQLRAMN 228
>gi|168049769|ref|XP_001777334.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168061528|ref|XP_001782740.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665773|gb|EDQ52446.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671310|gb|EDQ57864.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 416
Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 61/111 (54%), Positives = 72/111 (64%), Gaps = 12/111 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQ-----------QYSSQGGYASNGAPGQGPQS 49
M+EMNGVYCSSRPMRI AATP+KS G Q ++ Y + +P P
Sbjct: 160 MSEMNGVYCSSRPMRISAATPKKSLGPAQLNPKVDAVSPVAVATYAAYGAQPSPQAFP-V 218
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
+ D +NTTIFVGGLDP V DEDLR F Q+GE+ VKIP GKGCGFVQF +
Sbjct: 219 DNDPNNTTIFVGGLDPAVGDEDLRNVFGQFGELVYVKIPAGKGCGFVQFTH 269
>gi|242033859|ref|XP_002464324.1| hypothetical protein SORBIDRAFT_01g016170 [Sorghum bicolor]
gi|241918178|gb|EER91322.1| hypothetical protein SORBIDRAFT_01g016170 [Sorghum bicolor]
Length = 409
Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/108 (58%), Positives = 77/108 (71%), Gaps = 5/108 (4%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG YCSSRPMR+G A+ +K++G Q Q SS Y + QG S+ D +NTT+FV
Sbjct: 224 MTEMNGQYCSSRPMRLGPASNKKNTGGQPQPSSTI-YQNT----QGTDSDSDPNNTTVFV 278
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
GGLDP+VTDE L+Q FS YGE+ VKIPVGK CGFVQ++N AI
Sbjct: 279 GGLDPSVTDELLKQTFSPYGELLYVKIPVGKRCGFVQYSNRASAEEAI 326
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 37 YASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------ 89
+A++GA G + D S+ TIFVG L +VTD L+ F S+Y + S K+
Sbjct: 149 WATSGA---GEKRGDDGSDYTIFVGDLASDVTDFILQDTFKSRYPSVKSAKVVFDRTTGR 205
Query: 90 GKGCGFVQFANSLGQIMAI 108
KG GFV+FA+ Q A+
Sbjct: 206 SKGYGFVKFADLDEQTRAM 224
>gi|212722596|ref|NP_001131852.1| uncharacterized protein LOC100193230 [Zea mays]
gi|194692726|gb|ACF80447.1| unknown [Zea mays]
gi|413919585|gb|AFW59517.1| hypothetical protein ZEAMMB73_768040 [Zea mays]
Length = 434
Score = 115 bits (287), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 61/100 (61%), Positives = 69/100 (69%), Gaps = 10/100 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPG-QGPQSEGDSSNTTIF 59
MTEMNG+ CSSRPMRIG A RK++G G P QG QSE D +NTTIF
Sbjct: 235 MTEMNGMPCSSRPMRIGPAASRKNAG---------GVVQERVPNSQGAQSENDPNNTTIF 285
Query: 60 VGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
VGGLDPNVT++ L+Q FS YGE+ VKIPVGK CGFVQF
Sbjct: 286 VGGLDPNVTEDVLKQAFSPYGEVIHVKIPVGKRCGFVQFV 325
>gi|413919584|gb|AFW59516.1| hypothetical protein ZEAMMB73_768040, partial [Zea mays]
Length = 428
Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 61/100 (61%), Positives = 69/100 (69%), Gaps = 10/100 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPG-QGPQSEGDSSNTTIF 59
MTEMNG+ CSSRPMRIG A RK++G G P QG QSE D +NTTIF
Sbjct: 235 MTEMNGMPCSSRPMRIGPAASRKNAG---------GVVQERVPNSQGAQSENDPNNTTIF 285
Query: 60 VGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
VGGLDPNVT++ L+Q FS YGE+ VKIPVGK CGFVQF
Sbjct: 286 VGGLDPNVTEDVLKQAFSPYGEVIHVKIPVGKRCGFVQFV 325
>gi|356548971|ref|XP_003542872.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 409
Score = 114 bits (286), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 60/100 (60%), Positives = 70/100 (70%), Gaps = 5/100 (5%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEM GV CS+RPMRIG A+ + + Q +S N P QG Q+E D +NTTIFV
Sbjct: 219 MTEMQGVLCSTRPMRIGPASNKTPTTQSQPKAS----YQNSQP-QGSQNENDPNNTTIFV 273
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
G LDPNVTD+ LRQ FSQYGE+ VKIP GK CGFVQFA+
Sbjct: 274 GNLDPNVTDDHLRQVFSQYGELVHVKIPAGKRCGFVQFAD 313
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 7/64 (10%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQFANSLGQ 104
DS + TIFVG L +VTD L++ F ++Y + K+ + KG GFV+F++ Q
Sbjct: 156 DSPDYTIFVGDLAADVTDYLLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVRFSDESEQ 215
Query: 105 IMAI 108
+ A+
Sbjct: 216 VRAM 219
>gi|413919586|gb|AFW59518.1| hypothetical protein ZEAMMB73_768040 [Zea mays]
Length = 329
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/100 (61%), Positives = 69/100 (69%), Gaps = 10/100 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPG-QGPQSEGDSSNTTIF 59
MTEMNG+ CSSRPMRIG A RK++G G P QG QSE D +NTTIF
Sbjct: 235 MTEMNGMPCSSRPMRIGPAASRKNAG---------GVVQERVPNSQGAQSENDPNNTTIF 285
Query: 60 VGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
VGGLDPNVT++ L+Q FS YGE+ VKIPVGK CGFVQF
Sbjct: 286 VGGLDPNVTEDVLKQAFSPYGEVIHVKIPVGKRCGFVQFV 325
>gi|226504372|ref|NP_001141359.1| uncharacterized protein LOC100273450 [Zea mays]
gi|194704160|gb|ACF86164.1| unknown [Zea mays]
gi|413921127|gb|AFW61059.1| hypothetical protein ZEAMMB73_234884 [Zea mays]
Length = 453
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/100 (57%), Positives = 72/100 (72%), Gaps = 10/100 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG+ CSSRPMRIG A +K++ Q++ S QG QS+ D +NTTIFV
Sbjct: 270 MTEMNGMLCSSRPMRIGPAANKKATVVQEKVPS----------AQGVQSDNDPNNTTIFV 319
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
GGLDPNVT++ L+Q F+ YG++ VKIPVGK CGFVQ+AN
Sbjct: 320 GGLDPNVTEDMLKQVFTPYGDVVHVKIPVGKRCGFVQYAN 359
>gi|194702946|gb|ACF85557.1| unknown [Zea mays]
gi|413921126|gb|AFW61058.1| hypothetical protein ZEAMMB73_234884 [Zea mays]
Length = 456
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/100 (57%), Positives = 72/100 (72%), Gaps = 10/100 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG+ CSSRPMRIG A +K++ Q++ S QG QS+ D +NTTIFV
Sbjct: 270 MTEMNGMLCSSRPMRIGPAANKKATVVQEKVPS----------AQGVQSDNDPNNTTIFV 319
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
GGLDPNVT++ L+Q F+ YG++ VKIPVGK CGFVQ+AN
Sbjct: 320 GGLDPNVTEDMLKQVFTPYGDVVHVKIPVGKRCGFVQYAN 359
>gi|357144721|ref|XP_003573391.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Brachypodium distachyon]
Length = 435
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/101 (60%), Positives = 73/101 (72%), Gaps = 11/101 (10%)
Query: 1 MTEMNGVYCSSRPMRIG-AATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIF 59
MTEMNG+ CSSRPMRIG AA +K SG Q++ S QG QS+ D SNTTIF
Sbjct: 247 MTEMNGMVCSSRPMRIGPAANKQKVSGAQEKVPS----------AQGVQSDSDPSNTTIF 296
Query: 60 VGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
VGGLDPNVT++ L+Q F+ YGE+ VKIPVGK CGFVQ+A+
Sbjct: 297 VGGLDPNVTEDMLKQVFAPYGEVVHVKIPVGKRCGFVQYAS 337
>gi|297807995|ref|XP_002871881.1| hypothetical protein ARALYDRAFT_488820 [Arabidopsis lyrata subsp.
lyrata]
gi|297317718|gb|EFH48140.1| hypothetical protein ARALYDRAFT_488820 [Arabidopsis lyrata subsp.
lyrata]
Length = 426
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 72/107 (67%), Gaps = 9/107 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGA---------PGQGPQSEG 51
M EMNG+YCS+RPMRI AATP+K+ G QQQY ++G S A PGQG E
Sbjct: 174 MAEMNGLYCSTRPMRISAATPKKNVGVQQQYVTKGPVPSAVAAPVQAYIAQPGQGLPPES 233
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF 98
D + TTI + LDPNVT+E+L++ FSQ GEI VKIP KG G+VQF
Sbjct: 234 DVTCTTISIANLDPNVTEEELKKAFSQLGEIIYVKIPATKGYGYVQF 280
>gi|413921124|gb|AFW61056.1| hypothetical protein ZEAMMB73_234884 [Zea mays]
Length = 453
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/100 (57%), Positives = 72/100 (72%), Gaps = 10/100 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG+ CSSRPMRIG A +K++ Q++ S QG QS+ D +NTTIFV
Sbjct: 260 MTEMNGMLCSSRPMRIGPAANKKATVVQEKVPS----------AQGVQSDNDPNNTTIFV 309
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
GGLDPNVT++ L+Q F+ YG++ VKIPVGK CGFVQ+AN
Sbjct: 310 GGLDPNVTEDMLKQVFTPYGDVVHVKIPVGKRCGFVQYAN 349
>gi|223948225|gb|ACN28196.1| unknown [Zea mays]
gi|414590425|tpg|DAA40996.1| TPA: hypothetical protein ZEAMMB73_114709 [Zea mays]
Length = 503
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/98 (60%), Positives = 72/98 (73%), Gaps = 4/98 (4%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG+ S+R MRIGAA +K++ QQ Y++ G Y S+ QG SE D +NTT+FV
Sbjct: 300 MTEMNGMMLSTRKMRIGAAASKKNTDAQQTYATNGAYQSS----QGNCSENDPNNTTVFV 355
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF 98
GGLD NV +E LRQ F+ YGEI+ VKIPVGK CGFVQF
Sbjct: 356 GGLDSNVDEEYLRQIFTPYGEISYVKIPVGKHCGFVQF 393
>gi|212276053|ref|NP_001130512.1| uncharacterized protein LOC100191611 [Zea mays]
gi|194689348|gb|ACF78758.1| unknown [Zea mays]
gi|414590424|tpg|DAA40995.1| TPA: hypothetical protein ZEAMMB73_114709 [Zea mays]
Length = 472
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/98 (60%), Positives = 72/98 (73%), Gaps = 4/98 (4%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG+ S+R MRIGAA +K++ QQ Y++ G Y S+ QG SE D +NTT+FV
Sbjct: 269 MTEMNGMMLSTRKMRIGAAASKKNTDAQQTYATNGAYQSS----QGNCSENDPNNTTVFV 324
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF 98
GGLD NV +E LRQ F+ YGEI+ VKIPVGK CGFVQF
Sbjct: 325 GGLDSNVDEEYLRQIFTPYGEISYVKIPVGKHCGFVQF 362
>gi|115446801|ref|NP_001047180.1| Os02g0567900 [Oryza sativa Japonica Group]
gi|113536711|dbj|BAF09094.1| Os02g0567900, partial [Oryza sativa Japonica Group]
Length = 259
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/118 (51%), Positives = 79/118 (66%), Gaps = 13/118 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG YCS+RP+RIG ATPR+SSG + QS+ DS+N TI+V
Sbjct: 89 MTEMNGAYCSTRPIRIGPATPRRSSGDSGSSPPR-------------QSDSDSTNRTIYV 135
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGK 118
GGLDPN T+++LR+ F++YG++ASVKIPVGK CGFVQF N A+ G+ + GK
Sbjct: 136 GGLDPNATEDELRKAFAKYGDLASVKIPVGKQCGFVQFVNRPDAEEALQGLNGSTIGK 193
>gi|84468322|dbj|BAE71244.1| putative DNA binding protein [Trifolium pratense]
Length = 402
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 76/117 (64%), Gaps = 7/117 (5%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEM GV CS+RPMRIG AT + + ++Q + + PG QSE D +NTTIFV
Sbjct: 211 MTEMQGVLCSTRPMRIGPATNKNPAA-----TTQAKASYSNTPGG--QSENDPNNTTIFV 263
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEG 117
G LDPNVTD+ LRQ FSQYGE+ VKIP GK CGFVQF++ AI + T+ G
Sbjct: 264 GNLDPNVTDDHLRQVFSQYGELVHVKIPSGKRCGFVQFSDRSSAEEAIRVLNGTLLG 320
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFV 96
G+ + D + TIFVG L +VTD L++ F ++Y + K+ + KG GFV
Sbjct: 140 GERSSRQDDGPDHTIFVGDLAADVTDYLLQETFRARYNSVKGAKVVIDRLTGRSKGYGFV 199
Query: 97 QFANSLGQIMAI 108
+FA+ Q+ A+
Sbjct: 200 RFADEGEQMRAM 211
>gi|356555656|ref|XP_003546146.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 411
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/100 (62%), Positives = 71/100 (71%), Gaps = 5/100 (5%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEM GV CS+RPMRIG A+ K+ Q Q + Y N P QG Q+E D +NTTIFV
Sbjct: 220 MTEMQGVLCSTRPMRIGPAS-NKTPATQSQ--PKASYL-NSQP-QGSQNENDPNNTTIFV 274
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
G LDPNVTD+ LRQ FSQYGE+ VKIP GK CGFVQFA+
Sbjct: 275 GNLDPNVTDDHLRQVFSQYGELVHVKIPAGKRCGFVQFAD 314
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 7/66 (10%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQFANSL 102
+ DS + TIFVG L +VTD L++ F ++Y + K+ + KG GFV+F+
Sbjct: 155 QDDSPDYTIFVGDLAADVTDYLLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVRFSEES 214
Query: 103 GQIMAI 108
Q+ A+
Sbjct: 215 EQMRAM 220
>gi|222628961|gb|EEE61093.1| hypothetical protein OsJ_14988 [Oryza sativa Japonica Group]
Length = 373
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 83/118 (70%), Gaps = 13/118 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG YCS+RP+RIG ATPR+SSG + PG S+GDS+N T++V
Sbjct: 203 MTEMNGAYCSTRPIRIGPATPRRSSGDSGSST----------PGH---SDGDSTNRTVYV 249
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGK 118
GGLDPNV++++LR+ F++YG++ASVKIP+GK CGFVQF + A+ G+ ++ GK
Sbjct: 250 GGLDPNVSEDELRKAFAKYGDVASVKIPLGKQCGFVQFVSRTDAEEALQGLNGSVIGK 307
>gi|46806694|dbj|BAD17764.1| putative nucleic acid binding protein [Oryza sativa Japonica Group]
Length = 396
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/118 (51%), Positives = 79/118 (66%), Gaps = 13/118 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG YCS+RP+RIG ATPR+SSG + QS+ DS+N TI+V
Sbjct: 226 MTEMNGAYCSTRPIRIGPATPRRSSGDSGSSPPR-------------QSDSDSTNRTIYV 272
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGK 118
GGLDPN T+++LR+ F++YG++ASVKIPVGK CGFVQF N A+ G+ + GK
Sbjct: 273 GGLDPNATEDELRKAFAKYGDLASVKIPVGKQCGFVQFVNRPDAEEALQGLNGSTIGK 330
>gi|218191015|gb|EEC73442.1| hypothetical protein OsI_07730 [Oryza sativa Indica Group]
Length = 312
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/118 (51%), Positives = 79/118 (66%), Gaps = 13/118 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG YCS+RP+RIG ATPR+SSG + QS+ DS+N TI+V
Sbjct: 142 MTEMNGAYCSTRPIRIGPATPRRSSGDSGSSPPR-------------QSDSDSTNRTIYV 188
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGK 118
GGLDPN T+++LR+ F++YG++ASVKIPVGK CGFVQF N A+ G+ + GK
Sbjct: 189 GGLDPNATEDELRKAFAKYGDLASVKIPVGKQCGFVQFVNRPDAEEALQGLNGSTIGK 246
>gi|414886904|tpg|DAA62918.1| TPA: hypothetical protein ZEAMMB73_604225 [Zea mays]
Length = 484
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/98 (59%), Positives = 71/98 (72%), Gaps = 4/98 (4%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG+ S+R MRIGAA +K+ QQ Y++ G Y S+ +G SE D +NTT+FV
Sbjct: 268 MTEMNGMLLSTRQMRIGAAANKKNRDAQQTYATDGAYQSS----KGNSSENDPNNTTVFV 323
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF 98
GGLD NV +E LRQ F+ YGEI+ VKIPVGK CGFVQF
Sbjct: 324 GGLDSNVNEEYLRQIFTPYGEISYVKIPVGKHCGFVQF 361
>gi|226491568|ref|NP_001142233.1| uncharacterized protein LOC100274401 [Zea mays]
gi|194707728|gb|ACF87948.1| unknown [Zea mays]
gi|414886903|tpg|DAA62917.1| TPA: hypothetical protein ZEAMMB73_604225 [Zea mays]
Length = 465
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/98 (59%), Positives = 71/98 (72%), Gaps = 4/98 (4%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG+ S+R MRIGAA +K+ QQ Y++ G Y S+ +G SE D +NTT+FV
Sbjct: 268 MTEMNGMLLSTRQMRIGAAANKKNRDAQQTYATDGAYQSS----KGNSSENDPNNTTVFV 323
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF 98
GGLD NV +E LRQ F+ YGEI+ VKIPVGK CGFVQF
Sbjct: 324 GGLDSNVNEEYLRQIFTPYGEISYVKIPVGKHCGFVQF 361
>gi|125548504|gb|EAY94326.1| hypothetical protein OsI_16094 [Oryza sativa Indica Group]
Length = 426
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 83/118 (70%), Gaps = 13/118 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG YCS+RP+RIG ATPR+SSG + PG S+GDS+N T++V
Sbjct: 256 MTEMNGAYCSTRPIRIGPATPRRSSGDSGSST----------PGH---SDGDSTNRTVYV 302
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGK 118
GGLDPNV++++LR+ F++YG++ASVKIP+GK CGFVQF + A+ G+ ++ GK
Sbjct: 303 GGLDPNVSEDELRKAFAKYGDVASVKIPLGKQCGFVQFVSRTDAEEALQGLNGSVIGK 360
>gi|116310076|emb|CAH67097.1| H0818E04.14 [Oryza sativa Indica Group]
Length = 426
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 83/118 (70%), Gaps = 13/118 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG YCS+RP+RIG ATPR+SSG + PG S+GDS+N T++V
Sbjct: 256 MTEMNGAYCSTRPIRIGPATPRRSSGDSGSST----------PGH---SDGDSTNRTVYV 302
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGK 118
GGLDPNV++++LR+ F++YG++ASVKIP+GK CGFVQF + A+ G+ ++ GK
Sbjct: 303 GGLDPNVSEDELRKAFAKYGDVASVKIPLGKQCGFVQFVSRTDAEEALQGLNGSVIGK 360
>gi|297602825|ref|NP_001052934.2| Os04g0449900 [Oryza sativa Japonica Group]
gi|255675510|dbj|BAF14848.2| Os04g0449900 [Oryza sativa Japonica Group]
Length = 387
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 83/118 (70%), Gaps = 13/118 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG YCS+RP+RIG ATPR+SSG + PG S+GDS+N T++V
Sbjct: 217 MTEMNGAYCSTRPIRIGPATPRRSSGDSGSST----------PGH---SDGDSTNRTVYV 263
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGK 118
GGLDPNV++++LR+ F++YG++ASVKIP+GK CGFVQF + A+ G+ ++ GK
Sbjct: 264 GGLDPNVSEDELRKAFAKYGDVASVKIPLGKQCGFVQFVSRTDAEEALQGLNGSVIGK 321
>gi|224124344|ref|XP_002319308.1| predicted protein [Populus trichocarpa]
gi|222857684|gb|EEE95231.1| predicted protein [Populus trichocarpa]
Length = 344
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/100 (60%), Positives = 69/100 (69%), Gaps = 7/100 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
M EMNG YCS+RPMRIG A +K QQY A+ +P QG Q E D +NTTIFV
Sbjct: 219 MVEMNGQYCSTRPMRIGPAATKKP--LTQQYQK----AAYQSP-QGNQGESDPNNTTIFV 271
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
G LDP+VTD+ LR FS+YGE+ VKIP GK CGFVQFAN
Sbjct: 272 GALDPSVTDDTLRAVFSKYGELVHVKIPAGKRCGFVQFAN 311
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFV 96
G G + + D + T+F+G L +V D L++ F Y + K+ KG GFV
Sbjct: 148 GAGERRQDDGPDYTVFIGDLAADVNDYLLQETFRNVYSSVKGAKVVTDRVTGRSKGYGFV 207
Query: 97 QFANSLGQIMAI 108
+FA+ Q+ A+
Sbjct: 208 RFADENEQMRAM 219
>gi|357480263|ref|XP_003610417.1| RNA-binding protein [Medicago truncatula]
gi|355511472|gb|AES92614.1| RNA-binding protein [Medicago truncatula]
Length = 411
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 74/117 (63%), Gaps = 7/117 (5%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEM GV CS+RPMRIG A+ + +Q AS P G Q+E D +NTTIFV
Sbjct: 226 MTEMQGVLCSTRPMRIGPAS-------NKNLGTQTSKASYQNPQGGAQNENDPNNTTIFV 278
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEG 117
G LDPNVTDE L+Q F+QYGE+ VKIP GK CGFVQFA+ A+ + T+ G
Sbjct: 279 GNLDPNVTDEHLKQVFTQYGELVHVKIPSGKRCGFVQFADRSSAEEALRVLNGTLLG 335
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQF 98
G + DS + TIFVG L +V+D L + F ++Y + K+ + KG GFV+F
Sbjct: 157 GEKRHDDSPDYTIFVGDLAADVSDHHLTEVFRTRYNSVKGAKVVIDRTTGRTKGYGFVRF 216
Query: 99 ANSLGQIMAI 108
A+ Q+ A+
Sbjct: 217 ADESEQMRAM 226
>gi|365192966|gb|AEW68341.1| putative nuclear acid binding protein [Medicago sativa]
Length = 409
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 74/117 (63%), Gaps = 7/117 (5%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEM GV CS+RPMRIG A+ + +Q AS P G Q+E D +NTTIFV
Sbjct: 224 MTEMQGVLCSTRPMRIGPAS-------NKNLGTQTSKASYQNPQGGAQNENDPNNTTIFV 276
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEG 117
G LDPNVTDE L+Q F+QYGE+ VKIP GK CGFVQFA+ A+ + T+ G
Sbjct: 277 GNLDPNVTDEHLKQVFTQYGELVHVKIPSGKRCGFVQFADRSSAEEALRVLNGTLLG 333
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQF 98
G + DS + TIFVG L +V+D L + F ++Y + K+ + KG GFV+F
Sbjct: 155 GEKRHDDSPDYTIFVGDLAADVSDHHLTEVFRTRYNSVKGAKVVIDRNTGRSKGYGFVRF 214
Query: 99 ANSLGQIMAI 108
A+ Q+ A+
Sbjct: 215 ADESEQMRAM 224
>gi|388507756|gb|AFK41944.1| unknown [Medicago truncatula]
Length = 411
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 74/117 (63%), Gaps = 7/117 (5%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEM GV CS+RPMRIG A+ + +Q AS P G Q+E D +NTTIFV
Sbjct: 226 MTEMQGVLCSTRPMRIGPAS-------NKNLGTQTSKASYQNPQGGAQNENDPNNTTIFV 278
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEG 117
G LDPNVTDE L+Q F+QYGE+ VKIP GK CGFVQFA+ A+ + T+ G
Sbjct: 279 GNLDPNVTDEHLKQVFTQYGELVHVKIPSGKRCGFVQFADRSSAEEALRVLNGTLLG 335
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQF 98
G + DS + TIFVG L +V+D L + F ++Y + K+ + KG GFV+F
Sbjct: 157 GEKRHDDSPDYTIFVGDLAADVSDHHLTEVFRTRYNSVKGAKVVIDRTTGRTKGYGFVRF 216
Query: 99 ANSLGQIMAI 108
A+ Q+ A+
Sbjct: 217 ADESEQMRAM 226
>gi|224115306|ref|XP_002316998.1| predicted protein [Populus trichocarpa]
gi|222860063|gb|EEE97610.1| predicted protein [Populus trichocarpa]
Length = 403
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/100 (60%), Positives = 68/100 (68%), Gaps = 7/100 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
M EMNG YCS+RPMRIG A +K QQY A+ P QG Q E D +NTTIFV
Sbjct: 221 MVEMNGQYCSTRPMRIGPAATKKP--LTQQYQK----ATYQNP-QGNQGENDPNNTTIFV 273
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
G LDP+VTD+ LR FS+YGE+ VKIP GK CGFVQFAN
Sbjct: 274 GALDPSVTDDTLRAVFSKYGELVHVKIPAGKRCGFVQFAN 313
>gi|302784144|ref|XP_002973844.1| hypothetical protein SELMODRAFT_100454 [Selaginella moellendorffii]
gi|302803590|ref|XP_002983548.1| hypothetical protein SELMODRAFT_118305 [Selaginella moellendorffii]
gi|300148791|gb|EFJ15449.1| hypothetical protein SELMODRAFT_118305 [Selaginella moellendorffii]
gi|300158176|gb|EFJ24799.1| hypothetical protein SELMODRAFT_100454 [Selaginella moellendorffii]
Length = 350
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/98 (58%), Positives = 68/98 (69%), Gaps = 7/98 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEM GVYCS+RPMRI ATP+KS G+ + G P P ++ D SNTT+FV
Sbjct: 173 MTEMAGVYCSTRPMRISTATPKKSLAT----IPPKGFQNFGVP---PLTDNDPSNTTVFV 225
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF 98
GGLD +V DEDL+Q FSQ+G+I VKIP GK CGFVQF
Sbjct: 226 GGLDHSVKDEDLKQVFSQFGDIQYVKIPAGKNCGFVQF 263
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 14/73 (19%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGF 95
P QGP + +IFVG L P+VTD L++ F S+Y + K+ + KG GF
Sbjct: 108 PDQGP-------DFSIFVGDLAPDVTDYMLQETFQSRYSSVKGAKVVMDTTTARSKGYGF 160
Query: 96 VQFANSLGQIMAI 108
V+F + ++ A+
Sbjct: 161 VRFGDEAEKMRAM 173
>gi|356538950|ref|XP_003537963.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Glycine max]
Length = 392
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/123 (47%), Positives = 78/123 (63%), Gaps = 7/123 (5%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG---YASNGAPGQGPQSEGDSSNTT 57
MTEMNGVYCS+RPMRI AATP+K++ +Q QY+ + + AP E D +NTT
Sbjct: 156 MTEMNGVYCSTRPMRISAATPKKNASFQHQYAPPKAMYQFPAYSAPVSAVAPENDVNNTT 215
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEG 117
+ +G LD NVT+E+L+Q F Q+G+I VKI GKG G+VQF + AI M+G
Sbjct: 216 VCIGNLDLNVTEEELKQTFMQFGDIVLVKIYAGKGYGYVQFGTRVSAEDAI----QRMQG 271
Query: 118 KFM 120
K +
Sbjct: 272 KVI 274
>gi|357454295|ref|XP_003597428.1| RNA-binding protein [Medicago truncatula]
gi|355486476|gb|AES67679.1| RNA-binding protein [Medicago truncatula]
Length = 428
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/132 (46%), Positives = 78/132 (59%), Gaps = 16/132 (12%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGY------------ASNGAPGQGPQ 48
M+EMNGVYCS+RPMRI AATP+K++GYQQ + A AP
Sbjct: 167 MSEMNGVYCSTRPMRISAATPKKTTGYQQNPYAAVVAAAPVPKAIYPVPAYTTAPVNTVP 226
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
E D +NTTI+VG LD NV++E+L+Q F Q+GEI SVK+ GK CGFVQF AI
Sbjct: 227 PEYDVNNTTIYVGNLDLNVSEEELKQNFLQFGEIVSVKVHPGKACGFVQFGARASAEEAI 286
Query: 109 NGVGHTMEGKFM 120
M+GK +
Sbjct: 287 ----QKMQGKIL 294
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 10/72 (13%)
Query: 37 YASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------ 89
+AS G + P + D S IFVG L P+VTD L++ F + YG + K+
Sbjct: 92 WASFGIGERRPDAGPDHS---IFVGDLAPDVTDYLLQETFRTHYGSVRGAKVVTDPNTGR 148
Query: 90 GKGCGFVQFANS 101
KG GFV+F++
Sbjct: 149 SKGYGFVKFSDE 160
>gi|356538948|ref|XP_003537962.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Glycine max]
Length = 401
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/123 (47%), Positives = 78/123 (63%), Gaps = 7/123 (5%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG---YASNGAPGQGPQSEGDSSNTT 57
MTEMNGVYCS+RPMRI AATP+K++ +Q QY+ + + AP E D +NTT
Sbjct: 156 MTEMNGVYCSTRPMRISAATPKKNASFQHQYAPPKAMYQFPAYSAPVSAVAPENDVNNTT 215
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEG 117
+ +G LD NVT+E+L+Q F Q+G+I VKI GKG G+VQF + AI M+G
Sbjct: 216 VCIGNLDLNVTEEELKQTFMQFGDIVLVKIYAGKGYGYVQFGTRVSAEDAI----QRMQG 271
Query: 118 KFM 120
K +
Sbjct: 272 KVI 274
>gi|293337265|ref|NP_001168324.1| uncharacterized protein LOC100382091 [Zea mays]
gi|223947441|gb|ACN27804.1| unknown [Zea mays]
gi|223947469|gb|ACN27818.1| unknown [Zea mays]
gi|413933766|gb|AFW68317.1| hypothetical protein ZEAMMB73_975236, partial [Zea mays]
Length = 406
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/108 (55%), Positives = 74/108 (68%), Gaps = 6/108 (5%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG YCSSR MR+G A+ +K++G Q S Y + QG S+ D +NTT+FV
Sbjct: 222 MTEMNGQYCSSRAMRLGPASNKKNTGGPQ--PSSAIYQNT----QGTDSDSDPNNTTVFV 275
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
GGLDP+VTDE L+Q FS YGE+ VKIPVGK CGFVQ++N AI
Sbjct: 276 GGLDPSVTDELLKQTFSPYGELLYVKIPVGKRCGFVQYSNRASAEEAI 323
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 37 YASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------ 89
+A++GA G + D S+ TIFVG L +VTD L+ F S+Y + K+
Sbjct: 147 WATSGA---GEKRGDDGSDYTIFVGDLASDVTDFILQDTFKSRYPSVKGAKVVFDRTTGR 203
Query: 90 GKGCGFVQFANSLGQIMAI 108
KG GFV+FA+S Q A+
Sbjct: 204 SKGYGFVKFADSDEQTRAM 222
>gi|356521983|ref|XP_003529629.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 397
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/100 (57%), Positives = 66/100 (66%), Gaps = 7/100 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEM GV CS+RPMRIG A+ + S Q +S QG Q+E D +NTTIFV
Sbjct: 213 MTEMQGVLCSTRPMRIGPASNKNPSTQSQPKASYQN-------PQGAQNEHDPNNTTIFV 265
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
G LDPNVTD+ LRQ F YGE+ VKIP GK CGFVQFA+
Sbjct: 266 GNLDPNVTDDHLRQVFGHYGELVHVKIPAGKRCGFVQFAD 305
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQF 98
G + DS + TIFVG L +VTD L++ F ++Y I K+ + KG GFV+F
Sbjct: 144 GERRHDDSPDHTIFVGDLAADVTDYLLQETFRARYPSIKGAKVVIDRLTGRTKGYGFVRF 203
Query: 99 ANSLGQIMAI 108
+ Q+ A+
Sbjct: 204 GDESEQVRAM 213
>gi|255563907|ref|XP_002522953.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223537765|gb|EEF39383.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 404
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/114 (54%), Positives = 73/114 (64%), Gaps = 7/114 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
M EMNG YCS+R MRIG A +K + QQY + Y S QG Q E D +NTTIFV
Sbjct: 218 MVEMNGQYCSTRAMRIGPAATKKPA--VQQYQ-KAPYQST----QGTQGENDPNNTTIFV 270
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHT 114
G LDP+V+DE LRQ F +YGE+ VKIP GK CGFVQFAN A+ G+ T
Sbjct: 271 GALDPSVSDEHLRQVFGKYGELVHVKIPAGKRCGFVQFANRACAEQALLGLNGT 324
>gi|356563290|ref|XP_003549897.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 402
Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/100 (57%), Positives = 67/100 (67%), Gaps = 7/100 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
M+EM GV CS+RPMRIG A+ + S Q +S QG Q+E D +NTTIFV
Sbjct: 217 MSEMQGVLCSTRPMRIGPASNKNPSTQSQPKASYQN-------PQGAQNEHDPNNTTIFV 269
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
G LDPNVTD+ LRQ F QYGE+ VKIP GK CGFVQFA+
Sbjct: 270 GNLDPNVTDDHLRQVFGQYGELVHVKIPAGKRCGFVQFAD 309
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 7/70 (10%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQF 98
G + DS + TIFVG L +VTD L++ F ++Y K+ + KG GFV+F
Sbjct: 148 GERRHDDSPDHTIFVGDLAADVTDYLLQETFRARYPSAKGAKVVIDRLTGRTKGYGFVRF 207
Query: 99 ANSLGQIMAI 108
+ Q+ A+
Sbjct: 208 GDESEQVRAM 217
>gi|356541997|ref|XP_003539458.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Glycine max]
Length = 392
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/123 (47%), Positives = 77/123 (62%), Gaps = 7/123 (5%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG---YASNGAPGQGPQSEGDSSNTT 57
MTEMNGVYCS+RPMRI AATP+K++ +Q QY+ + + AP E D +NTT
Sbjct: 156 MTEMNGVYCSTRPMRISAATPKKNASFQHQYAPPKAMYQFPAYTAPVSTVAPENDVNNTT 215
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEG 117
+ +G LD NVT+E+L+Q F Q+G+I VKI GKG G+VQF AI M+G
Sbjct: 216 VCIGNLDLNVTEEELKQAFVQFGDIVLVKIYAGKGYGYVQFGTRASAEDAI----QRMQG 271
Query: 118 KFM 120
K +
Sbjct: 272 KVI 274
>gi|449513289|ref|XP_004164285.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
RBP47B'-like [Cucumis sativus]
Length = 427
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/128 (46%), Positives = 78/128 (60%), Gaps = 12/128 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQ------YSSQGGYASNGAPGQGP--QSEGD 52
M+EMNG YCS+RPMRI AATP+K + +++ Y P ++ D
Sbjct: 172 MSEMNGXYCSTRPMRISAATPKKPLVFSSNTVXVKVMNNESMYPVPAYTTSVPVLPADYD 231
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVG 112
++NTTIFVG LDPN+T+E+L+Q F Q+GEIA VKIP GKGCGFVQF AI
Sbjct: 232 ANNTTIFVGNLDPNITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAI---- 287
Query: 113 HTMEGKFM 120
M+GK +
Sbjct: 288 QKMQGKII 295
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 14/66 (21%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGF 95
P GP+ +IFVG L P+VTD L++ F +QY + K+ KG GF
Sbjct: 107 PDAGPEH-------SIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGF 159
Query: 96 VQFANS 101
V+FA+
Sbjct: 160 VKFADE 165
>gi|356541995|ref|XP_003539457.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Glycine max]
Length = 401
Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 58/123 (47%), Positives = 77/123 (62%), Gaps = 7/123 (5%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG---YASNGAPGQGPQSEGDSSNTT 57
MTEMNGVYCS+RPMRI AATP+K++ +Q QY+ + + AP E D +NTT
Sbjct: 156 MTEMNGVYCSTRPMRISAATPKKNASFQHQYAPPKAMYQFPAYTAPVSTVAPENDVNNTT 215
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEG 117
+ +G LD NVT+E+L+Q F Q+G+I VKI GKG G+VQF AI M+G
Sbjct: 216 VCIGNLDLNVTEEELKQAFVQFGDIVLVKIYAGKGYGYVQFGTRASAEDAI----QRMQG 271
Query: 118 KFM 120
K +
Sbjct: 272 KVI 274
>gi|194703366|gb|ACF85767.1| unknown [Zea mays]
Length = 420
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 83/118 (70%), Gaps = 14/118 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
M+EMNGVYCS+RP+RIG ATPR+SSG + PG S+GDSSN T++V
Sbjct: 251 MSEMNGVYCSTRPIRIGPATPRRSSGDSGSST----------PG---HSDGDSSNRTVYV 297
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGK 118
GGLDPNV++++LR+ F++Y ++ASVKIP+GK CGFVQF + A+ G+ ++ GK
Sbjct: 298 GGLDPNVSEDELRKAFAKY-DLASVKIPLGKQCGFVQFVSRTDAEEALQGLNGSLIGK 354
>gi|115451047|ref|NP_001049124.1| Os03g0174100 [Oryza sativa Japonica Group]
gi|113547595|dbj|BAF11038.1| Os03g0174100, partial [Oryza sativa Japonica Group]
Length = 438
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 78/126 (61%), Gaps = 12/126 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQG---PQ-----SEGD 52
MTEMNG+YCS+RPMRI AA P+K++G Q QY G A P G PQ + D
Sbjct: 190 MTEMNGMYCSTRPMRISAAIPKKTTGSQLQY----GAAKAMYPAAGYAVPQVQPVLPDSD 245
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVG 112
+NTTIF+G LD NVT+++LRQ Q+GE+ VKIP K CGFVQ+A+ A+ +
Sbjct: 246 PTNTTIFIGNLDQNVTEDELRQICVQFGELIYVKIPANKACGFVQYASRASAEEAVQRLH 305
Query: 113 HTMEGK 118
T G+
Sbjct: 306 GTTIGQ 311
>gi|108706453|gb|ABF94248.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|215694482|dbj|BAG89475.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 416
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 80/122 (65%), Gaps = 4/122 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQY-SSQGGYASNG--APGQGP-QSEGDSSNT 56
MTEMNG+YCS+RPMRI AA P+K++G Q QY +++ Y + G P P + D +NT
Sbjct: 168 MTEMNGMYCSTRPMRISAAIPKKTTGSQLQYGAAKAMYPAAGYAVPQVQPVLPDSDPTNT 227
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTME 116
TIF+G LD NVT+++LRQ Q+GE+ VKIP K CGFVQ+A+ A+ + T
Sbjct: 228 TIFIGNLDQNVTEDELRQICVQFGELIYVKIPANKACGFVQYASRASAEEAVQRLHGTTI 287
Query: 117 GK 118
G+
Sbjct: 288 GQ 289
>gi|226495169|ref|NP_001150649.1| nucleic acid binding protein [Zea mays]
gi|195640856|gb|ACG39896.1| nucleic acid binding protein [Zea mays]
Length = 420
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 83/118 (70%), Gaps = 14/118 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
M+EMNGVYCS+RP+RIG ATPR+SSG + PG S+GDSSN T++V
Sbjct: 251 MSEMNGVYCSTRPIRIGPATPRRSSGDSGSST----------PG---HSDGDSSNRTVYV 297
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGK 118
GGLDPNV++++LR+ F++Y ++ASVKIP+GK CGFVQF + A+ G+ ++ GK
Sbjct: 298 GGLDPNVSEDELRKAFAKY-DLASVKIPLGKQCGFVQFVSRTDAEEALQGLNGSLIGK 354
>gi|218192181|gb|EEC74608.1| hypothetical protein OsI_10216 [Oryza sativa Indica Group]
Length = 416
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 80/122 (65%), Gaps = 4/122 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQY-SSQGGYASNG--APGQGP-QSEGDSSNT 56
MTEMNG+YCS+RPMRI AA P+K++G Q QY +++ Y + G P P + D +NT
Sbjct: 168 MTEMNGMYCSTRPMRISAAIPKKTTGSQLQYGAAKAMYPAAGYAVPQVQPVLPDSDPTNT 227
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTME 116
TIF+G LD NVT+++LRQ Q+GE+ VKIP K CGFVQ+A+ A+ + T
Sbjct: 228 TIFIGNLDQNVTEDELRQICVQFGELIYVKIPANKACGFVQYASRASAEEAVQRLHGTTI 287
Query: 117 GK 118
G+
Sbjct: 288 GQ 289
>gi|326513618|dbj|BAJ87828.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 388
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 73/101 (72%), Gaps = 11/101 (10%)
Query: 1 MTEMNGVYCSSRPMRIG-AATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIF 59
MTEMNG+ CSSRPMRIG AA +K++G Q++ + QG Q++ D SN+TIF
Sbjct: 232 MTEMNGMICSSRPMRIGPAANKQKANGVQEKVPT----------AQGIQTDNDPSNSTIF 281
Query: 60 VGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
VGGLDP+ T++ L+Q F+ YGE+ VKIPVGK CGFVQ+A+
Sbjct: 282 VGGLDPSATEDVLKQVFTPYGEVVHVKIPVGKRCGFVQYAS 322
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFAN 100
+ D ++ TIFVG L +VTD L++ F +QY + K+ KG GFV+F +
Sbjct: 165 EKHDDGADYTIFVGDLAADVTDYLLQETFRAQYPSVKGAKVVTDKLTMRSKGYGFVKFGD 224
Query: 101 SLGQIMAI 108
Q A+
Sbjct: 225 PTEQTRAM 232
>gi|326495314|dbj|BAJ85753.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 385
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 73/101 (72%), Gaps = 11/101 (10%)
Query: 1 MTEMNGVYCSSRPMRIG-AATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIF 59
MTEMNG+ CSSRPMRIG AA +K++G Q++ + QG Q++ D SN+TIF
Sbjct: 232 MTEMNGMICSSRPMRIGPAANKQKANGVQEKVPT----------AQGIQTDNDPSNSTIF 281
Query: 60 VGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
VGGLDP+ T++ L+Q F+ YGE+ VKIPVGK CGFVQ+A+
Sbjct: 282 VGGLDPSATEDVLKQVFTPYGEVVHVKIPVGKRCGFVQYAS 322
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFAN 100
+ D ++ TIFVG L +VTD L++ F +QY + K+ KG GFV+F +
Sbjct: 165 EKHDDGADYTIFVGDLAADVTDYLLQETFRAQYPSVKGAKVVTDKLTMRSKGYGFVKFGD 224
Query: 101 SLGQIMAI 108
Q A+
Sbjct: 225 PTEQTRAM 232
>gi|195620484|gb|ACG32072.1| nucleic acid binding protein [Zea mays]
gi|195625400|gb|ACG34530.1| nucleic acid binding protein [Zea mays]
Length = 369
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/118 (50%), Positives = 83/118 (70%), Gaps = 14/118 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
M+EMNGVYCS+RP+RIG ATPR+SSG + PG S+GDSSN T++V
Sbjct: 200 MSEMNGVYCSTRPIRIGPATPRRSSGDSGSST----------PG---HSDGDSSNRTVYV 246
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGK 118
GGLDPNV++++LR+ F++Y ++ASVKIP+GK CGFVQF + A+ G+ ++ GK
Sbjct: 247 GGLDPNVSEDELRKAFAKY-DLASVKIPLGKQCGFVQFVSRTDAEEALQGLNGSLIGK 303
>gi|75334880|sp|Q9LEB4.1|RBP45_NICPL RecName: Full=Polyadenylate-binding protein RBP45;
Short=Poly(A)-binding protein RBP45; AltName:
Full=RNA-binding protein 45; Short=NplRBP45
gi|9663767|emb|CAC01237.1| RNA Binding Protein 45 [Nicotiana plumbaginifolia]
Length = 409
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/117 (50%), Positives = 70/117 (59%), Gaps = 8/117 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGV CS+RPMRIG A +K G Q+ + Q A+ G E D +NTTIFV
Sbjct: 235 MTEMNGVLCSTRPMRIGPAANKKPVGTPQKATYQNPQATQG--------ESDPNNTTIFV 286
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEG 117
GGLDP V +E LRQ FS YGE+ VKI GK CGFVQF A++ + T G
Sbjct: 287 GGLDPTVAEEHLRQVFSPYGELVHVKIVAGKRCGFVQFGTRASAEQALSSLNGTQLG 343
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 10/74 (13%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFAN 100
+ DS+ TIFVG L +VTD L++ F S Y + K+ KG GFV+FA+
Sbjct: 168 ERRDDSAEHTIFVGDLAADVTDYILQETFKSVYSSVRGAKVVTDRITGRSKGYGFVKFAD 227
Query: 101 SLGQIMA---INGV 111
Q+ A +NGV
Sbjct: 228 ESEQLRAMTEMNGV 241
>gi|302760919|ref|XP_002963882.1| hypothetical protein SELMODRAFT_80061 [Selaginella moellendorffii]
gi|300169150|gb|EFJ35753.1| hypothetical protein SELMODRAFT_80061 [Selaginella moellendorffii]
Length = 332
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/99 (57%), Positives = 66/99 (66%), Gaps = 3/99 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQ-GPQSEGDSSNTTIF 59
MTEM+GVYCSSRPMRI ATP+K + QQ + Y A P E D +NTTIF
Sbjct: 166 MTEMHGVYCSSRPMRIRTATPKKQT--QQHPVQRVSYQLVPAYAMPAPAGEDDFTNTTIF 223
Query: 60 VGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF 98
VGGLD NV+ +DL+ FS YGEI KIP G+GCGFVQF
Sbjct: 224 VGGLDQNVSLDDLKDVFSPYGEIKYTKIPPGRGCGFVQF 262
>gi|302813198|ref|XP_002988285.1| hypothetical protein SELMODRAFT_447249 [Selaginella moellendorffii]
gi|300144017|gb|EFJ10704.1| hypothetical protein SELMODRAFT_447249 [Selaginella moellendorffii]
Length = 352
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/99 (57%), Positives = 66/99 (66%), Gaps = 3/99 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQ-GPQSEGDSSNTTIF 59
MTEM+GVYCSSRPMRI ATP+K + QQ + Y A P E D +NTTIF
Sbjct: 166 MTEMHGVYCSSRPMRIRTATPKKQT--QQHPVQRVSYQLVPAYAMPAPAGEDDFTNTTIF 223
Query: 60 VGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF 98
VGGLD NV+ +DL+ FS YGEI KIP G+GCGFVQF
Sbjct: 224 VGGLDQNVSLDDLKDVFSPYGEIKYTKIPPGRGCGFVQF 262
>gi|224078632|ref|XP_002305583.1| predicted protein [Populus trichocarpa]
gi|222848547|gb|EEE86094.1| predicted protein [Populus trichocarpa]
Length = 382
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 67/100 (67%), Gaps = 7/100 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG +CS+RPMR+G A+ +K+ QQ Y PQ++GD +NTTIFV
Sbjct: 201 MTEMNGAFCSTRPMRVGLASNKKAVVGQQ-------YPKASYQNPQPQNDGDPNNTTIFV 253
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
G LD NV D+ L++ F QYG++ VKIP GK CGFVQFA+
Sbjct: 254 GNLDSNVMDDHLKELFGQYGQLLHVKIPAGKRCGFVQFAD 293
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KG 92
N A G DS + TIFVG L +VTD L++ F + + + K+ + KG
Sbjct: 126 NWASFSGGDKRDDSPDFTIFVGDLAADVTDFMLQETFRAHFPSVKGAKVVIDRLTGRTKG 185
Query: 93 CGFVQFANSLGQIMAI 108
GFV+F + Q+ A+
Sbjct: 186 YGFVRFGDESEQLRAM 201
>gi|357116772|ref|XP_003560152.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 470
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/114 (53%), Positives = 74/114 (64%), Gaps = 3/114 (2%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGV SSR +RIG A +K+ G QQ YS+ G Y S + QG + D +NTTIFV
Sbjct: 268 MTEMNGVTLSSRQLRIGPAANKKNMGTQQTYSTNG-YQSQSS--QGNDVQNDPNNTTIFV 324
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHT 114
GGLD N+ + LRQ F+ YGE+ VKIPVGK CGFVQF + AIN + T
Sbjct: 325 GGLDSNIDENYLRQVFTPYGEVGYVKIPVGKRCGFVQFTSRSCAEEAINALNGT 378
>gi|30524689|emb|CAC85246.1| salt tolerance protein 6 [Beta vulgaris]
Length = 322
Score = 104 bits (260), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 56/100 (56%), Positives = 63/100 (63%), Gaps = 10/100 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
M+EMNG+ C R MRIGAA +KS G Y + QG ++ D SNTTIFV
Sbjct: 142 MSEMNGMMCLGRAMRIGAAANKKSVGGTASYQN----------NQGTPNDSDPSNTTIFV 191
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
G LD NVTDE LRQ FS YGE+ VKIP GK CGFVQF N
Sbjct: 192 GNLDSNVTDEHLRQTFSPYGELVHVKIPAGKQCGFVQFTN 231
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 13/92 (14%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFV 96
G G + D+S+ TIFVG L P+VTD L++ F +Y + K+ + KG GFV
Sbjct: 71 GSGEKRGEDASDYTIFVGDLAPDVTDYTLQETFRVRYPSVKGAKVVIDRLTSRSKGYGFV 130
Query: 97 QFANSLGQIMAINGVGHTMEGKFMMVMGMLFR 128
+F + Q A++ M G MM +G R
Sbjct: 131 RFGDESEQARAMS----EMNG--MMCLGRAMR 156
>gi|302795494|ref|XP_002979510.1| hypothetical protein SELMODRAFT_111082 [Selaginella moellendorffii]
gi|300152758|gb|EFJ19399.1| hypothetical protein SELMODRAFT_111082 [Selaginella moellendorffii]
Length = 432
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/112 (51%), Positives = 73/112 (65%), Gaps = 13/112 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKS--SGYQQQYSS----QGGYASNGAP-------GQGP 47
M+EMNGVYCSSRPMRI AATP+K+ +G ++ Q AS P Q
Sbjct: 180 MSEMNGVYCSSRPMRISAATPKKAMAAGLTTVTAATIVPQPTIASPITPPPSLSIQSQVL 239
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
+ D +NTTIFVGGLD N+T+E+++Q FS GE+ SVKIP GKGC FVQ+A
Sbjct: 240 PPDSDPTNTTIFVGGLDLNITEEEVKQTFSHIGELVSVKIPPGKGCAFVQYA 291
>gi|356557398|ref|XP_003547003.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 404
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/124 (47%), Positives = 72/124 (58%), Gaps = 6/124 (4%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKS-SGYQQQYSSQGGYASNGAPGQGP-----QSEGDSS 54
MTEMNGVYCS+RPMRI AATP+K+ S Y + P E D +
Sbjct: 151 MTEMNGVYCSTRPMRISAATPKKTTSAYAAPAAPVPKPVYPVPAYTAPVVQVQPPEYDVN 210
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHT 114
NT IFVG LD NV++E+L+Q F Q+GEI SVK+ GKGCGFVQF AI +
Sbjct: 211 NTAIFVGNLDLNVSEEELKQNFLQFGEIVSVKVQSGKGCGFVQFGTRASAEEAIQKMQEK 270
Query: 115 MEGK 118
M G+
Sbjct: 271 MIGQ 274
>gi|15239715|ref|NP_197436.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|75331115|sp|Q8VXZ9.1|R47BP_ARATH RecName: Full=Polyadenylate-binding protein RBP47B';
Short=Poly(A)-binding protein RBP47B'; AltName:
Full=RNA-binding protein 47B'; Short=AtRBP47B prime;
Short=AtRBP47B'
gi|18377731|gb|AAL67015.1| putative DNA binding protein ACBF [Arabidopsis thaliana]
gi|21281189|gb|AAM45052.1| putative DNA binding protein ACBF [Arabidopsis thaliana]
gi|332005306|gb|AED92689.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 425
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 70/105 (66%), Gaps = 7/105 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGY-----ASNGAPGQG--PQSEGDS 53
M EMNG+YCS+RPMRI AATP+K+ G QQQY ++ Y ++ AP Q E D
Sbjct: 175 MAEMNGLYCSTRPMRISAATPKKNVGVQQQYVTKAVYPVTVPSAVAAPVQAYVAPPESDV 234
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF 98
+ TTI V LD NVT+E+L++ FSQ GE+ VKIP KG G+VQF
Sbjct: 235 TCTTISVANLDQNVTEEELKKAFSQLGEVIYVKIPATKGYGYVQF 279
>gi|30682335|ref|NP_849641.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332190644|gb|AEE28765.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 306
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 66/101 (65%), Gaps = 10/101 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKS-SGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIF 59
MTEMNGV CS+RPMRIG A +K +G + Y S G ++ D +NTT+F
Sbjct: 214 MTEMNGVPCSTRPMRIGPAASKKGVTGQRDSYQSSAA---------GVTTDNDPNNTTVF 264
Query: 60 VGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
VGGLD +VTD+ L+ FSQYGEI VKIP GK CGFVQF+
Sbjct: 265 VGGLDASVTDDHLKNVFSQYGEIVHVKIPAGKRCGFVQFSE 305
Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 10/70 (14%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQFANSLGQ 104
DS + TIFVG L +VTD L + F + Y + K+ + KG GFV+F++ Q
Sbjct: 151 DSPDYTIFVGDLAADVTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQ 210
Query: 105 IMA---INGV 111
I A +NGV
Sbjct: 211 IRAMTEMNGV 220
>gi|15221071|ref|NP_172630.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|75336898|sp|Q9SAB3.1|RB45B_ARATH RecName: Full=Polyadenylate-binding protein RBP45B;
Short=Poly(A)-binding protein RBP45B; AltName:
Full=RNA-binding protein 45B; Short=AtRBP45B
gi|4835793|gb|AAD30259.1|AC007296_20 Similar to gb|U90212 DNA binding protein ACBF from Nicotiana
tabacum and contains 3 PF|00076 RNA recognition motif
domains. ESTs gb|T44278, gb|R65195, gb|N65904,
gb|H37499, gb|R90487, gb|N95952, gb|T44278, gb|Z20166,
gb|N96891, gb|W43137, gb|F15504, gb|F15495 and gb|Z30868
come from this gene [Arabidopsis thaliana]
gi|20260604|gb|AAM13200.1| similar to gb|U90212 DNA binding protein ACBF from Nicotiana
tabacum and contains 3 PF|00076 RNA recognition motif
domains [Arabidopsis thaliana]
gi|30725662|gb|AAP37853.1| At1g11650 [Arabidopsis thaliana]
gi|332190643|gb|AEE28764.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 405
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 66/101 (65%), Gaps = 10/101 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKS-SGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIF 59
MTEMNGV CS+RPMRIG A +K +G + Y S G ++ D +NTT+F
Sbjct: 214 MTEMNGVPCSTRPMRIGPAASKKGVTGQRDSYQSSAA---------GVTTDNDPNNTTVF 264
Query: 60 VGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
VGGLD +VTD+ L+ FSQYGEI VKIP GK CGFVQF+
Sbjct: 265 VGGLDASVTDDHLKNVFSQYGEIVHVKIPAGKRCGFVQFSE 305
Score = 38.5 bits (88), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 10/70 (14%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQFANSLGQ 104
DS + TIFVG L +VTD L + F + Y + K+ + KG GFV+F++ Q
Sbjct: 151 DSPDYTIFVGDLAADVTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQ 210
Query: 105 IMA---INGV 111
I A +NGV
Sbjct: 211 IRAMTEMNGV 220
>gi|21592583|gb|AAM64532.1| putative DNA binding protein [Arabidopsis thaliana]
Length = 404
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 66/101 (65%), Gaps = 10/101 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKS-SGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIF 59
MTEMNGV CS+RPMRIG A +K +G + Y S G ++ D +NTT+F
Sbjct: 213 MTEMNGVPCSTRPMRIGPAASKKGVTGQRDSYQSSAA---------GVTTDNDPNNTTVF 263
Query: 60 VGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
VGGLD +VTD+ L+ FSQYGEI VKIP GK CGFVQF+
Sbjct: 264 VGGLDASVTDDHLKNVFSQYGEIVHVKIPAGKRCGFVQFSE 304
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 10/70 (14%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQFANSLGQ 104
DS + TIFVG L +VTD L + F + Y + K+ + KG GFV+F++ Q
Sbjct: 150 DSPDYTIFVGDLAADVTDYILLETFRASYPSVKGAKVVINRVTGRTKGYGFVRFSDESEQ 209
Query: 105 IMA---INGV 111
I A +NGV
Sbjct: 210 IRAMTEMNGV 219
>gi|297791731|ref|XP_002863750.1| hypothetical protein ARALYDRAFT_331131 [Arabidopsis lyrata subsp.
lyrata]
gi|297309585|gb|EFH40009.1| hypothetical protein ARALYDRAFT_331131 [Arabidopsis lyrata subsp.
lyrata]
Length = 400
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 64/118 (54%), Gaps = 31/118 (26%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
M EMNGV C R MRIG ATPRK SGY QQ
Sbjct: 243 MLEMNGVKCCGRAMRIGPATPRKPSGYHQQ------------------------------ 272
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGK 118
GLD +VTD+DLRQPF+ YGEI SVKIPVGKGCGF+QF N A+ + +M GK
Sbjct: 273 -GLDSSVTDDDLRQPFAGYGEIVSVKIPVGKGCGFIQFVNRENAEEALEKLNGSMIGK 329
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 10/67 (14%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFVQFANSLGQ--- 104
+ +IFVG L P VTD L Q FS+ Y + + K+ + KG GFV+F + +
Sbjct: 183 DLSIFVGDLAPEVTDTMLEQIFSEKYPSVKNAKVVIDGNTGRSKGYGFVRFGDDSERSKA 242
Query: 105 IMAINGV 111
++ +NGV
Sbjct: 243 MLEMNGV 249
>gi|165935740|gb|ABY75165.1| RNA binding protein [Arachis diogoi]
Length = 142
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/66 (75%), Positives = 55/66 (83%), Gaps = 3/66 (4%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA---NSLGQ 104
QSE DS+NTTIFVGGLDPNVTDEDLRQ FSQYGEI SVK+PVGKGCGFVQFA N+
Sbjct: 3 QSEADSTNTTIFVGGLDPNVTDEDLRQQFSQYGEIVSVKVPVGKGCGFVQFAIRNNAEEA 62
Query: 105 IMAING 110
+ +NG
Sbjct: 63 LQKLNG 68
>gi|145334517|ref|NP_001078604.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332005307|gb|AED92690.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 421
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 68/101 (67%), Gaps = 3/101 (2%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASN-GAPGQG--PQSEGDSSNTT 57
M EMNG+YCS+RPMRI AATP+K+ G QQQY ++ S AP Q E D + TT
Sbjct: 175 MAEMNGLYCSTRPMRISAATPKKNVGVQQQYVTKVTVPSAVAAPVQAYVAPPESDVTCTT 234
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF 98
I V LD NVT+E+L++ FSQ GE+ VKIP KG G+VQF
Sbjct: 235 ISVANLDQNVTEEELKKAFSQLGEVIYVKIPATKGYGYVQF 275
>gi|255554923|ref|XP_002518499.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223542344|gb|EEF43886.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 430
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 54/100 (54%), Positives = 72/100 (72%), Gaps = 5/100 (5%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MT+MNG +CS+RPMRIG AT K++ QQY + Y ++ G+ +E D +NTTIFV
Sbjct: 240 MTDMNGAFCSTRPMRIGLAT-NKNAVTGQQYP-KASYQNSQTQGE---NENDPNNTTIFV 294
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
G LD NVTD++LR+ F +YG++ VKIP GK CGFVQFA+
Sbjct: 295 GNLDSNVTDDNLRELFGRYGQLLHVKIPAGKRCGFVQFAD 334
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPVG------KG 92
N A G D+ + TIFVG L +VTD L+ F Y + K+ + KG
Sbjct: 165 NWASFSGGDKRDDTPDFTIFVGDLAADVTDYILQDTFRVHYPSVKGAKVVIDRLTGRTKG 224
Query: 93 CGFVQFANSLGQIMAI 108
GFV+F + Q+ A+
Sbjct: 225 YGFVRFGDESEQVRAM 240
>gi|297792959|ref|XP_002864364.1| hypothetical protein ARALYDRAFT_495572 [Arabidopsis lyrata subsp.
lyrata]
gi|297310199|gb|EFH40623.1| hypothetical protein ARALYDRAFT_495572 [Arabidopsis lyrata subsp.
lyrata]
Length = 398
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 69/105 (65%), Gaps = 18/105 (17%)
Query: 1 MTEMNGVYCSSRPMRIGAAT-----PRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSN 55
MTEMNG YCS+RPMRIG A P + + YQ ++QGG A + D +N
Sbjct: 217 MTEMNGQYCSTRPMRIGPAANKNALPMQPAMYQ---NTQGGNAG----------DSDPNN 263
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
TTIFVGGLD NVTD++L+ F Q+GE+ VKIP GK CGFVQ+AN
Sbjct: 264 TTIFVGGLDANVTDDELKSIFGQFGELLHVKIPPGKRCGFVQYAN 308
Score = 42.0 bits (97), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 37 YASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------ 89
+A GA + Q+EG + TIFVG L P VTD L F YG + K+ V
Sbjct: 141 WAQAGAGEKRHQTEG--PDHTIFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVVDRTTGR 198
Query: 90 GKGCGFVQFANSLGQIMAI 108
KG GFV+FA+ Q+ A+
Sbjct: 199 SKGYGFVRFADENEQMRAM 217
>gi|356550323|ref|XP_003543537.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Glycine max]
Length = 410
Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/150 (44%), Positives = 84/150 (56%), Gaps = 16/150 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSG--------YQQQYSSQGGYASNGAPGQGPQSEGD 52
MTEMNGVYCS+RPMRI AATP+K++G + Y S Q P + D
Sbjct: 166 MTEMNGVYCSTRPMRISAATPKKTTGAYAAPAAPVPKPVYPVPAYTSPVVQVQPP--DYD 223
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVG 112
+NTTIFVG LD NV++E+L+Q Q+GEI SVKI GKG GFVQF AI
Sbjct: 224 VNNTTIFVGNLDLNVSEEELKQNSLQFGEIVSVKIQPGKGFGFVQFGTRASAEEAI---- 279
Query: 113 HTMEGKFMMVMGMLFRHQMTQACTLQQLRP 142
M+GK M+ + R + T +Q+ P
Sbjct: 280 QKMQGK--MIGQQVVRISWGRTLTARQMDP 307
>gi|297844004|ref|XP_002889883.1| ATRBP45B [Arabidopsis lyrata subsp. lyrata]
gi|297335725|gb|EFH66142.1| ATRBP45B [Arabidopsis lyrata subsp. lyrata]
Length = 408
Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 68/101 (67%), Gaps = 10/101 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKS-SGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIF 59
MTEMNGV CS+RPMRIG A +K +G + Y S A+ G P ++ D +NTT+F
Sbjct: 216 MTEMNGVPCSTRPMRIGPAASKKGVTGQRDSYQS----AAGGVP-----TDNDPNNTTVF 266
Query: 60 VGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
VGGLD +VTD+ L+ F QYGEI VKIP GK CGFVQF+
Sbjct: 267 VGGLDQSVTDDHLKNVFGQYGEIVHVKIPAGKRCGFVQFSE 307
Score = 38.9 bits (89), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 10/70 (14%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQFANSLGQ 104
DS + TIFVG L +VTD L + F + Y + K+ + KG GFV+F++ Q
Sbjct: 153 DSPDYTIFVGDLAADVTDYILLETFRASYPSVKGAKVVIDRATGRTKGYGFVRFSDESEQ 212
Query: 105 IMA---INGV 111
I A +NGV
Sbjct: 213 IRAMTEMNGV 222
>gi|302792090|ref|XP_002977811.1| hypothetical protein SELMODRAFT_232989 [Selaginella moellendorffii]
gi|300154514|gb|EFJ21149.1| hypothetical protein SELMODRAFT_232989 [Selaginella moellendorffii]
Length = 455
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 75/130 (57%), Gaps = 31/130 (23%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKS--------------------SGYQQQYSSQGG---- 36
M+EMNGVYCSSRPMRI AATP+K+ S ++ ++
Sbjct: 180 MSEMNGVYCSSRPMRISAATPKKAMAAGLTTVTAATIVPQPTIASPFKAATTTTTPTYQT 239
Query: 37 --YASNGAPGQGPQS-----EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
Y+ P QS + D +NTTIFVGGLD N+T+E+++Q FSQ GE+ SVKIP
Sbjct: 240 MPYSITPPPSLSIQSQVLPPDSDPTNTTIFVGGLDLNITEEEVKQTFSQIGELVSVKIPP 299
Query: 90 GKGCGFVQFA 99
GKGC FVQ+A
Sbjct: 300 GKGCAFVQYA 309
>gi|302794528|ref|XP_002979028.1| hypothetical protein SELMODRAFT_418663 [Selaginella moellendorffii]
gi|302806386|ref|XP_002984943.1| hypothetical protein SELMODRAFT_424039 [Selaginella moellendorffii]
gi|300147529|gb|EFJ14193.1| hypothetical protein SELMODRAFT_424039 [Selaginella moellendorffii]
gi|300153346|gb|EFJ19985.1| hypothetical protein SELMODRAFT_418663 [Selaginella moellendorffii]
Length = 408
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/104 (52%), Positives = 77/104 (74%), Gaps = 9/104 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRK----SSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNT 56
M+EMNG+YCSSRPMRI AATP+K S+ Q+ ++ +A+ +P Q ++ D +NT
Sbjct: 172 MSEMNGIYCSSRPMRINAATPKKALIPSAPAPQKVTT---FAT--SPLQNVPNDNDPNNT 226
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
TIFVGGLDP V++E+L++ F ++GE+ VKIP GKGCGFVQF +
Sbjct: 227 TIFVGGLDPAVSEEELQKTFGEFGELVYVKIPPGKGCGFVQFTH 270
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 8/69 (11%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFAN 100
+ EG N+ IFVG L P+VTD L++ F ++Y + K+ KG GFV+FA+
Sbjct: 106 RPEGGPENS-IFVGDLAPDVTDYMLQETFRTRYPSVRGAKVVTDVATGRSKGYGFVRFAD 164
Query: 101 SLGQIMAIN 109
++ A++
Sbjct: 165 DSERVRAMS 173
>gi|356550321|ref|XP_003543536.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Glycine max]
Length = 419
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 84/153 (54%), Gaps = 16/153 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSG--------YQQQYSSQGGYASNGAPGQGPQSEGD 52
MTEMNGVYCS+RPMRI AATP+K++G + Y S Q P + D
Sbjct: 166 MTEMNGVYCSTRPMRISAATPKKTTGAYAAPAAPVPKPVYPVPAYTSPVVQVQPP--DYD 223
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVG 112
+NTTIFVG LD NV++E+L+Q Q+GEI SVKI GKG GFVQF AI
Sbjct: 224 VNNTTIFVGNLDLNVSEEELKQNSLQFGEIVSVKIQPGKGFGFVQFGTRASAEEAI---- 279
Query: 113 HTMEGKFMMVMGMLFRHQMTQACTLQQLRPMGL 145
M+GK M+ + R + T +Q P G
Sbjct: 280 QKMQGK--MIGQQVVRISWGRTLTARQDLPGGW 310
>gi|9758270|dbj|BAB08769.1| unnamed protein product [Arabidopsis thaliana]
Length = 390
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MTEMNGVYCSSRPMRIGAAT-----PRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSN 55
MTEMNG YCS+RPMRIG A P + + YQ ++QG A + D +N
Sbjct: 213 MTEMNGQYCSTRPMRIGPAANKNALPMQPAMYQ---NTQGANAG----------DNDPNN 259
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
TTIFVGGLD NVTD++L+ F Q+GE+ VKIP GK CGFVQ+AN
Sbjct: 260 TTIFVGGLDANVTDDELKSIFGQFGELLHVKIPPGKRCGFVQYAN 304
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 37 YASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------ 89
+A GA + Q+EG + TIFVG L P VTD L F YG + K+ +
Sbjct: 137 WAQAGAGEKRFQTEG--PDHTIFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVLDRTTGR 194
Query: 90 GKGCGFVQFANSLGQIMAI 108
KG GFV+FA+ Q+ A+
Sbjct: 195 SKGYGFVRFADENEQMRAM 213
>gi|18423684|ref|NP_568815.1| RNA-binding protein 45A [Arabidopsis thaliana]
gi|75334165|sp|Q9FPJ8.1|RB45A_ARATH RecName: Full=Polyadenylate-binding protein RBP45A;
Short=Poly(A)-binding protein RBP45A; AltName:
Full=RNA-binding protein 45A; Short=AtRBP45A
gi|11762114|gb|AAG40335.1|AF324983_1 AT5g54900 [Arabidopsis thaliana]
gi|119360145|gb|ABL66801.1| At5g54900 [Arabidopsis thaliana]
gi|332009171|gb|AED96554.1| RNA-binding protein 45A [Arabidopsis thaliana]
Length = 387
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MTEMNGVYCSSRPMRIGAAT-----PRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSN 55
MTEMNG YCS+RPMRIG A P + + YQ ++QG A + D +N
Sbjct: 213 MTEMNGQYCSTRPMRIGPAANKNALPMQPAMYQ---NTQGANAG----------DNDPNN 259
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
TTIFVGGLD NVTD++L+ F Q+GE+ VKIP GK CGFVQ+AN
Sbjct: 260 TTIFVGGLDANVTDDELKSIFGQFGELLHVKIPPGKRCGFVQYAN 304
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 37 YASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------ 89
+A GA + Q+EG + TIFVG L P VTD L F YG + K+ +
Sbjct: 137 WAQAGAGEKRFQTEG--PDHTIFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVLDRTTGR 194
Query: 90 GKGCGFVQFANSLGQIMAI 108
KG GFV+FA+ Q+ A+
Sbjct: 195 SKGYGFVRFADENEQMRAM 213
>gi|297799290|ref|XP_002867529.1| hypothetical protein ARALYDRAFT_913848 [Arabidopsis lyrata subsp.
lyrata]
gi|297313365|gb|EFH43788.1| hypothetical protein ARALYDRAFT_913848 [Arabidopsis lyrata subsp.
lyrata]
Length = 418
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 63/100 (63%), Gaps = 9/100 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG YCSSRPMR G A +K Q Y + QG Q E D +NTTIFV
Sbjct: 233 MTEMNGQYCSSRPMRTGPAANKKPLTMQP-----ASYQNT----QGNQGESDPTNTTIFV 283
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
G LD +V ++DL+ F Q+GE+ VKIP GK CGFVQ+AN
Sbjct: 284 GALDQSVIEDDLKSVFGQFGELVHVKIPAGKRCGFVQYAN 323
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFV 96
G G + + + T+FVG L P+VTD L + F Y + K+ KG GFV
Sbjct: 162 GAGERRQAEGPEHTVFVGDLAPDVTDHMLTETFKAVYSSVKGAKVVTDRTTGRSKGYGFV 221
Query: 97 QFANSLGQIMAI 108
+F + QI A+
Sbjct: 222 RFGDESEQIRAM 233
>gi|348670884|gb|EGZ10705.1| hypothetical protein PHYSODRAFT_520170 [Phytophthora sojae]
Length = 390
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 66/105 (62%), Gaps = 15/105 (14%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGL 63
MNGVYCSSRPMR+ AT R S QG + GAP E + +NTT+FVGGL
Sbjct: 158 MNGVYCSSRPMRVSVATERSKS------RQQGAF---GAP------EEEGTNTTVFVGGL 202
Query: 64 DPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
DP+ T+++LR F GEI SVK+P G+GCGFVQ+ + +AI
Sbjct: 203 DPSTTEDELRARFGALGEIVSVKVPPGRGCGFVQYTSKEAAEVAI 247
>gi|18416906|ref|NP_567764.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|75331668|sp|Q93W34.1|RP45C_ARATH RecName: Full=Polyadenylate-binding protein RBP45C;
Short=Poly(A)-binding protein RBP45C; AltName:
Full=RNA-binding protein 45C; Short=AtRBP45C
gi|13878153|gb|AAK44154.1|AF370339_1 putative DNA binding protein [Arabidopsis thaliana]
gi|15450814|gb|AAK96678.1| putative DNA binding protein [Arabidopsis thaliana]
gi|17104569|gb|AAL34173.1| putative DNA binding protein [Arabidopsis thaliana]
gi|20259888|gb|AAM13291.1| putative DNA binding protein [Arabidopsis thaliana]
gi|332659882|gb|AEE85282.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 415
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 63/100 (63%), Gaps = 9/100 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG YCSSRPMR G A +K Q Y + QG E D +NTTIFV
Sbjct: 232 MTEMNGQYCSSRPMRTGPAANKKPLTMQP-----ASYQNT----QGNSGESDPTNTTIFV 282
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
G +D +VT++DL+ F Q+GE+ VKIP GK CGFVQ+AN
Sbjct: 283 GAVDQSVTEDDLKSVFGQFGELVHVKIPAGKRCGFVQYAN 322
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIP------VGKGCGFV 96
G G + + + T+FVG L P+VTD L + F Y + K+ KG GFV
Sbjct: 161 GAGERRQAEGPEHTVFVGDLAPDVTDHMLTETFKAVYSSVKGAKVVNDRTTGRSKGYGFV 220
Query: 97 QFANSLGQIMAI 108
+FA+ QI A+
Sbjct: 221 RFADESEQIRAM 232
>gi|4455223|emb|CAB36546.1| putative DNA binding protein [Arabidopsis thaliana]
gi|7269553|emb|CAB79555.1| putative DNA binding protein [Arabidopsis thaliana]
Length = 427
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 63/100 (63%), Gaps = 9/100 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG YCSSRPMR G A +K Q Y + QG E D +NTTIFV
Sbjct: 232 MTEMNGQYCSSRPMRTGPAANKKPLTMQP-----ASYQNT----QGNSGESDPTNTTIFV 282
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
G +D +VT++DL+ F Q+GE+ VKIP GK CGFVQ+AN
Sbjct: 283 GAVDQSVTEDDLKSVFGQFGELVHVKIPAGKRCGFVQYAN 322
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIP------VGKGCGFV 96
G G + + + T+FVG L P+VTD L + F Y + K+ KG GFV
Sbjct: 161 GAGERRQAEGPEHTVFVGDLAPDVTDHMLTETFKAVYSSVKGAKVVNDRTTGRSKGYGFV 220
Query: 97 QFANSLGQIMAI 108
+FA+ QI A+
Sbjct: 221 RFADESEQIRAM 232
>gi|451993069|gb|EMD85544.1| hypothetical protein COCHEDRAFT_1035442 [Cochliobolus
heterostrophus C5]
Length = 409
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/127 (45%), Positives = 67/127 (52%), Gaps = 18/127 (14%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEG--------- 51
+TEM GVYC +RPMRI ATP+ SG G G PG G S G
Sbjct: 219 LTEMQGVYCGNRPMRISTATPKNKSGGPGGPGGMGMPQGAGGPGMGMYSMGAPPMGNYYG 278
Query: 52 ---------DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSL 102
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF
Sbjct: 279 APQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRH 338
Query: 103 GQIMAIN 109
MAIN
Sbjct: 339 AAEMAIN 345
>gi|451846221|gb|EMD59531.1| hypothetical protein COCSADRAFT_251085 [Cochliobolus sativus
ND90Pr]
Length = 406
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/127 (45%), Positives = 67/127 (52%), Gaps = 18/127 (14%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEG--------- 51
+TEM GVYC +RPMRI ATP+ SG G G PG G S G
Sbjct: 216 LTEMQGVYCGNRPMRISTATPKNKSGGPGGPGGMGMPQGAGGPGMGMYSMGAPPMGNYYG 275
Query: 52 ---------DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSL 102
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF
Sbjct: 276 APQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRH 335
Query: 103 GQIMAIN 109
MAIN
Sbjct: 336 AAEMAIN 342
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 14/99 (14%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P + ++ ++S GG A +GP+ +IFVG L P VT+ L Q F
Sbjct: 125 GQLIPNSNRPFKLNWASGGGLADRSRDERGPE-------FSIFVGDLGPEVTEFVLVQLF 177
Query: 77 -SQYGEIASVKI---PV---GKGCGFVQFANSLGQIMAI 108
++Y S KI P+ +G GFV+FA+ Q A+
Sbjct: 178 QNKYPSTKSAKIMSDPISGMSRGYGFVRFASEEDQQKAL 216
>gi|213401961|ref|XP_002171753.1| RNA-binding post-transcriptional regulator csx1
[Schizosaccharomyces japonicus yFS275]
gi|211999800|gb|EEB05460.1| RNA-binding post-transcriptional regulator csx1
[Schizosaccharomyces japonicus yFS275]
Length = 476
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/113 (50%), Positives = 67/113 (59%), Gaps = 5/113 (4%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGGYASNGAPGQGPQSEG---DSSNT 56
+TEM GVYC +RPMRI ATP+ K+ Y G G G PQ D +NT
Sbjct: 250 LTEMQGVYCGNRPMRIAMATPKSKNHMYSPMNMMHIGLQPVGFYG-APQPVNQFTDPTNT 308
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAIN 109
T+FVGGL VT+E+LR F +GEI VKIP GKGCGFVQF N +AIN
Sbjct: 309 TVFVGGLSGYVTEEELRFLFQNFGEIIYVKIPPGKGCGFVQFVNRQSAELAIN 361
>gi|430812963|emb|CCJ29641.1| unnamed protein product [Pneumocystis jirovecii]
Length = 853
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 64/111 (57%), Gaps = 4/111 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEG---DSSNTT 57
+TEM GVYC SRP+RI ATP+ G G + G G PQ D +NTT
Sbjct: 219 LTEMQGVYCGSRPIRISTATPKNKPGMSHINMMHMGMSPLGYYG-APQPMNQFTDPNNTT 277
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF MAI
Sbjct: 278 VFVGGLSSFVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAI 328
>gi|119489215|ref|XP_001262859.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Neosartorya fischeri NRRL 181]
gi|119411017|gb|EAW20962.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Neosartorya fischeri NRRL 181]
Length = 417
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/121 (47%), Positives = 67/121 (55%), Gaps = 12/121 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKS-----SGYQQQYSSQGGYASNGAPGQG----PQSEG 51
+TEM GVYC +RPMRI ATP+ G G Y GAP G PQ
Sbjct: 219 LTEMQGVYCGNRPMRISTATPKNKGPGVVPGAMGMPGPAGMYPPMGAPPMGFYGAPQPMN 278
Query: 52 ---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF MAI
Sbjct: 279 QFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAI 338
Query: 109 N 109
N
Sbjct: 339 N 339
>gi|70982362|ref|XP_746709.1| mRNA binding post-transcriptional regulator (Csx1) [Aspergillus
fumigatus Af293]
gi|66844333|gb|EAL84671.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus fumigatus Af293]
gi|159123048|gb|EDP48168.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus fumigatus A1163]
Length = 418
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/121 (47%), Positives = 67/121 (55%), Gaps = 12/121 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKS-----SGYQQQYSSQGGYASNGAPGQG----PQSEG 51
+TEM GVYC +RPMRI ATP+ G G Y GAP G PQ
Sbjct: 220 LTEMQGVYCGNRPMRISTATPKNKGPGVVPGAMGMPGPAGMYPPMGAPPMGFYGAPQPMN 279
Query: 52 ---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF MAI
Sbjct: 280 QFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAI 339
Query: 109 N 109
N
Sbjct: 340 N 340
>gi|357111822|ref|XP_003557709.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 361
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 58/100 (58%), Gaps = 22/100 (22%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG YCS+RPMR+G AT G S+ DS+NT +FV
Sbjct: 201 MTEMNGAYCSTRPMRVGPATKMA----------------------GKYSDSDSNNTRLFV 238
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
GGLD VTDEDL++ FS YGE+ VK+ GK CGFV + N
Sbjct: 239 GGLDRIVTDEDLKKAFSPYGELTEVKVIAGKKCGFVTYLN 278
>gi|452982866|gb|EME82624.1| hypothetical protein MYCFIDRAFT_51313 [Pseudocercospora fijiensis
CIRAD86]
Length = 414
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/125 (49%), Positives = 71/125 (56%), Gaps = 17/125 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGY---------QQQYSSQGGYASNGAPGQG----P 47
+ EM GVYC +RPMRI ATP+ SG QQ QG Y S GAP G P
Sbjct: 234 LHEMQGVYCGNRPMRISTATPKNKSGGAGGPGMGGMQQVPGGQGMY-SMGAPPMGYYGAP 292
Query: 48 QSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQ 104
Q D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF
Sbjct: 293 QPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAA 352
Query: 105 IMAIN 109
MAIN
Sbjct: 353 EMAIN 357
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 18/110 (16%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P + ++ ++S GG A +GP+ +IFVG L P V + L F
Sbjct: 143 GQMIPNSNRQFKLNWASGGGLADRSRDDRGPE-------YSIFVGDLGPEVNEYVLMSLF 195
Query: 77 -SQYGEIASVKI---PV---GKGCGFVQFANSLGQIMAINGVGHTMEGKF 119
++Y S KI P+ +G GFV+FA+ Q A+ H M+G +
Sbjct: 196 QNKYPSCKSAKIMSDPISGMSRGYGFVRFADETDQQKAL----HEMQGVY 241
>gi|296412343|ref|XP_002835884.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629680|emb|CAZ80041.1| unnamed protein product [Tuber melanosporum]
Length = 412
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 64/110 (58%), Gaps = 17/110 (15%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSE-GDSSNTTIF 59
+TEM GVYC +RPMRI ATP+ S A G P ++ D +NTT+F
Sbjct: 195 LTEMQGVYCGNRPMRISTATPKNKS----------------ATGGPPMNQFTDPNNTTVF 238
Query: 60 VGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAIN 109
VGGL VT+++LR F +GEI VKIP GKGCGFVQF MAIN
Sbjct: 239 VGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAIN 288
>gi|134079837|emb|CAK40970.1| unnamed protein product [Aspergillus niger]
Length = 402
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 69/122 (56%), Gaps = 13/122 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRK------SSGYQQQYSSQGGYASNGAPGQG----PQSE 50
++EM GVYC +RPMRI ATP+ ++G G Y GAP G PQ
Sbjct: 219 LSEMQGVYCGNRPMRISTATPKNKGPSLGAAGAMGMPGPAGMYPPMGAPPMGFYGAPQPM 278
Query: 51 G---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMA 107
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF MA
Sbjct: 279 NQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMA 338
Query: 108 IN 109
IN
Sbjct: 339 IN 340
>gi|350637619|gb|EHA25976.1| hypothetical protein ASPNIDRAFT_212792 [Aspergillus niger ATCC
1015]
Length = 403
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 69/122 (56%), Gaps = 13/122 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRK------SSGYQQQYSSQGGYASNGAPGQG----PQSE 50
++EM GVYC +RPMRI ATP+ ++G G Y GAP G PQ
Sbjct: 220 LSEMQGVYCGNRPMRISTATPKNKGPSLGAAGAMGMPGPAGMYPPMGAPPMGFYGAPQPM 279
Query: 51 G---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMA 107
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF MA
Sbjct: 280 NQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMA 339
Query: 108 IN 109
IN
Sbjct: 340 IN 341
>gi|317033242|ref|XP_001395129.2| mRNA binding post-transcriptional regulator (Csx1) [Aspergillus
niger CBS 513.88]
gi|317033244|ref|XP_003188853.1| mRNA binding post-transcriptional regulator (Csx1) [Aspergillus
niger CBS 513.88]
Length = 399
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 69/122 (56%), Gaps = 13/122 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRK------SSGYQQQYSSQGGYASNGAPGQG----PQSE 50
++EM GVYC +RPMRI ATP+ ++G G Y GAP G PQ
Sbjct: 220 LSEMQGVYCGNRPMRISTATPKNKGPSLGAAGAMGMPGPAGMYPPMGAPPMGFYGAPQPM 279
Query: 51 G---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMA 107
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF MA
Sbjct: 280 NQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMA 339
Query: 108 IN 109
IN
Sbjct: 340 IN 341
>gi|358374531|dbj|GAA91122.1| mRNA binding post-transcriptional regulator [Aspergillus kawachii
IFO 4308]
Length = 402
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 69/122 (56%), Gaps = 13/122 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRK------SSGYQQQYSSQGGYASNGAPGQG----PQSE 50
++EM GVYC +RPMRI ATP+ ++G G Y GAP G PQ
Sbjct: 219 LSEMQGVYCGNRPMRISTATPKNKGPSLGAAGAMGMPGPAGMYPPMGAPPMGFYGAPQPM 278
Query: 51 G---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMA 107
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF MA
Sbjct: 279 NQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMA 338
Query: 108 IN 109
IN
Sbjct: 339 IN 340
>gi|380478379|emb|CCF43635.1| RNA recognition domain-containing protein, partial [Colletotrichum
higginsianum]
Length = 419
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 71/137 (51%), Gaps = 28/137 (20%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSG----YQQQYSSQ---------------------- 34
+ EM GVYC +RPMRI ATP+ S YQQ + +Q
Sbjct: 211 LVEMQGVYCGNRPMRISTATPKNRSNHGGPYQQHHGNQMMAPGLPPHQQGFYGVPSPAQY 270
Query: 35 -GGY-ASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG 92
G Y A PGQ D +NTT+FVGGL VT+++LR F +GEI VKIP GKG
Sbjct: 271 GGAYGAPYNPPGQQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKG 330
Query: 93 CGFVQFANSLGQIMAIN 109
CGFVQF + MAIN
Sbjct: 331 CGFVQFVHRHAAEMAIN 347
>gi|325183868|emb|CCA18326.1| conserved hypothetical protein [Albugo laibachii Nc14]
gi|325183943|emb|CCA18401.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 429
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 67/110 (60%), Gaps = 8/110 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIF 59
+ MNGVYCSSRPMR+ AT R K+ G S G G +E + +NTT+F
Sbjct: 155 LQTMNGVYCSSRPMRVSVATDRTKTRGIMPPP------ISYTVVGTG-NTEEEGANTTVF 207
Query: 60 VGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAIN 109
+GGLDP+ T++DLR F GEI SVK+P G+GCGFVQ+ +AIN
Sbjct: 208 IGGLDPSTTEDDLRARFGVIGEIMSVKVPPGRGCGFVQYVTKDAADVAIN 257
>gi|336275731|ref|XP_003352619.1| hypothetical protein SMAC_01453 [Sordaria macrospora k-hell]
gi|380094509|emb|CCC07889.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 517
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 71/135 (52%), Gaps = 30/135 (22%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASN---------------GAPGQ 45
+ EM GVYC +RPMRI ATP+ + QY + +A+N G P Q
Sbjct: 195 LVEMQGVYCGNRPMRISTATPKTRT---HQYGAHAPHAANAMMAPVPAHAANMQWGVPPQ 251
Query: 46 GPQSEG-----------DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG 94
P G D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCG
Sbjct: 252 -PYYSGFNPMQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCG 310
Query: 95 FVQFANSLGQIMAIN 109
FVQF + MAIN
Sbjct: 311 FVQFVHRHAAEMAIN 325
>gi|350295821|gb|EGZ76798.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 523
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 71/135 (52%), Gaps = 30/135 (22%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASN---------------GAPGQ 45
+ EM GVYC +RPMRI ATP+ + QY + +A+N G P Q
Sbjct: 227 LVEMQGVYCGNRPMRISTATPKTRT---HQYGAHAPHAANPMMAPVPAHATNLQWGVPPQ 283
Query: 46 GPQSEG-----------DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG 94
P G D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCG
Sbjct: 284 -PYYSGFNPMQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCG 342
Query: 95 FVQFANSLGQIMAIN 109
FVQF + MAIN
Sbjct: 343 FVQFVHRHAAEMAIN 357
>gi|336463751|gb|EGO51991.1| hypothetical protein NEUTE1DRAFT_149626 [Neurospora tetrasperma
FGSC 2508]
Length = 491
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 71/135 (52%), Gaps = 30/135 (22%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASN---------------GAPGQ 45
+ EM GVYC +RPMRI ATP+ + QY + +A+N G P Q
Sbjct: 195 LVEMQGVYCGNRPMRISTATPKTRT---HQYGAHAPHAANPMMAPVPAHATNLQWGVPPQ 251
Query: 46 GPQSEG-----------DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG 94
P G D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCG
Sbjct: 252 -PYYSGFNPMQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCG 310
Query: 95 FVQFANSLGQIMAIN 109
FVQF + MAIN
Sbjct: 311 FVQFVHRHAAEMAIN 325
>gi|367019444|ref|XP_003659007.1| hypothetical protein MYCTH_2087998 [Myceliophthora thermophila ATCC
42464]
gi|347006274|gb|AEO53762.1| hypothetical protein MYCTH_2087998 [Myceliophthora thermophila ATCC
42464]
Length = 396
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/134 (44%), Positives = 73/134 (54%), Gaps = 28/134 (20%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASN--------------GAP--- 43
+ EM GVYC +RPMRI ATP+ S QY G +N GAP
Sbjct: 192 LVEMQGVYCGNRPMRISTATPKTRS---HQYGGAHGQGANPMIPPVPGHPGPMWGAPAYY 248
Query: 44 GQG-------PQSE-GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGF 95
GQG P ++ D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGF
Sbjct: 249 GQGAAFNPMQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGF 308
Query: 96 VQFANSLGQIMAIN 109
VQF + MAIN
Sbjct: 309 VQFVHRHAAEMAIN 322
>gi|301107790|ref|XP_002902977.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262098095|gb|EEY56147.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 382
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 63/106 (59%), Gaps = 15/106 (14%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGL 63
MNGVYCSSRPMR+ AT R S Q ++ E + +NTT+FVGGL
Sbjct: 158 MNGVYCSSRPMRVSVATERNKSRQQVGFT---------------MGEEEGTNTTVFVGGL 202
Query: 64 DPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAIN 109
DP T+++LR F G I SVK+P G+GCGFVQ+++ +AI+
Sbjct: 203 DPATTEDELRARFGALGAIVSVKVPPGRGCGFVQYSSKEAAEVAIS 248
>gi|297737425|emb|CBI26626.3| unnamed protein product [Vitis vinifera]
Length = 224
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/73 (64%), Positives = 52/73 (71%)
Query: 45 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQ 104
QG Q E D +NTTIFVGGLD NVTD+ LRQ FSQYGE+ VKIPVGK CGFVQFAN
Sbjct: 41 QGNQGESDPNNTTIFVGGLDSNVTDDYLRQVFSQYGELVHVKIPVGKRCGFVQFANRACA 100
Query: 105 IMAINGVGHTMEG 117
A+ G+ T G
Sbjct: 101 EQALAGLNGTQLG 113
>gi|121709146|ref|XP_001272322.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus clavatus NRRL 1]
gi|119400471|gb|EAW10896.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus clavatus NRRL 1]
Length = 417
Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/121 (46%), Positives = 65/121 (53%), Gaps = 12/121 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG-----YASNGAPGQG----PQSEG 51
+TEM GVYC +RPMRI ATP+ Y GAP G PQ
Sbjct: 219 LTEMQGVYCGNRPMRISTATPKNKGPGVVPGGMGMPGPAGMYPPMGAPPMGFYGAPQPMN 278
Query: 52 ---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF MAI
Sbjct: 279 QFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAI 338
Query: 109 N 109
N
Sbjct: 339 N 339
>gi|345561228|gb|EGX44324.1| hypothetical protein AOL_s00193g52 [Arthrobotrys oligospora ATCC
24927]
Length = 461
Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/123 (47%), Positives = 70/123 (56%), Gaps = 14/123 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQY-------SSQGGYASNGAPGQG----PQS 49
+TEM GVYC +RPMRI ATP+ G Q + Q G + GAP G PQ
Sbjct: 209 LTEMQGVYCGNRPMRISTATPKNKGGNQGMMQQGMGGMAPQMGMYTMGAPTMGYYGAPQP 268
Query: 50 EG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIM 106
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF M
Sbjct: 269 MNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEM 328
Query: 107 AIN 109
AIN
Sbjct: 329 AIN 331
>gi|310798962|gb|EFQ33855.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 419
Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 71/137 (51%), Gaps = 28/137 (20%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSG---YQQQYS------------SQGGY-------- 37
+ EM GVYC +RPMRI ATP+ + YQQQ+ QG Y
Sbjct: 211 LVEMQGVYCGNRPMRISTATPKNRNHGGPYQQQHHGNQMMAPGLPPHQQGFYGVPSPAQY 270
Query: 38 -----ASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG 92
A PGQ D +NTT+FVGGL VT+++LR F +GEI VKIP GKG
Sbjct: 271 GGAYGAPYNPPGQQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKG 330
Query: 93 CGFVQFANSLGQIMAIN 109
CGFVQF + MAIN
Sbjct: 331 CGFVQFVHRHAAEMAIN 347
>gi|85115744|ref|XP_964924.1| hypothetical protein NCU00768 [Neurospora crassa OR74A]
gi|28926722|gb|EAA35688.1| conserved hypothetical protein [Neurospora crassa OR74A]
gi|38636412|emb|CAE81949.1| related to polyadenylate-binding protein [Neurospora crassa]
Length = 491
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 71/135 (52%), Gaps = 30/135 (22%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASN---------------GAPGQ 45
+ EM GVYC +RPMRI ATP+ + QY + +A+N G P Q
Sbjct: 195 LVEMQGVYCGNRPMRISTATPKTRT---HQYGAHAPHAANPMMAPVPAHATNLQWGVPPQ 251
Query: 46 GPQSEG-----------DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG 94
P G D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCG
Sbjct: 252 -PYYSGFNPMQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCG 310
Query: 95 FVQFANSLGQIMAIN 109
FVQF + MAIN
Sbjct: 311 FVQFVHRHAAEMAIN 325
>gi|83774240|dbj|BAE64365.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 488
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 65/121 (53%), Gaps = 12/121 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG-----YASNGAPGQG----PQSEG 51
++EM GVYC +RPMRI ATP+ Y GAP G PQ
Sbjct: 217 LSEMQGVYCGNRPMRISTATPKNKGPGVVPGGMGMPGPAGMYPPMGAPPMGFYGAPQPMN 276
Query: 52 ---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF MAI
Sbjct: 277 QFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAI 336
Query: 109 N 109
N
Sbjct: 337 N 337
>gi|238498926|ref|XP_002380698.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus flavus NRRL3357]
gi|220693972|gb|EED50317.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus flavus NRRL3357]
Length = 427
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 65/121 (53%), Gaps = 12/121 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG-----YASNGAPGQG----PQSEG 51
++EM GVYC +RPMRI ATP+ Y GAP G PQ
Sbjct: 241 LSEMQGVYCGNRPMRISTATPKNKGPGVVPGGMGMPGPAGMYPPMGAPPMGFYGAPQPMN 300
Query: 52 ---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF MAI
Sbjct: 301 QFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAI 360
Query: 109 N 109
N
Sbjct: 361 N 361
>gi|402077003|gb|EJT72352.1| tRNA selenocysteine-associated protein 1 [Gaeumannomyces graminis
var. tritici R3-111a-1]
Length = 423
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 72/140 (51%), Gaps = 33/140 (23%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQG---GYASNGAPGQ------------ 45
+ EM GVYC +RPMRI ATP+ S QQYS+QG G AP Q
Sbjct: 195 LLEMQGVYCGNRPMRISTATPKTRS--HQQYSAQGQHGGPMPMAAPAQQQNMNWGMPYGF 252
Query: 46 ---GPQSEG-------------DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
P + D +NTT+FVGGL VT+++LR F +G+I VKIP
Sbjct: 253 NQPAPPAANNFNAAMQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGDITYVKIPP 312
Query: 90 GKGCGFVQFANSLGQIMAIN 109
GKGCGFVQF + MAIN
Sbjct: 313 GKGCGFVQFVHRHAAEMAIN 332
>gi|391868084|gb|EIT77307.1| RRM domain protein [Aspergillus oryzae 3.042]
Length = 395
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 65/121 (53%), Gaps = 12/121 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG-----YASNGAPGQG----PQSEG 51
++EM GVYC +RPMRI ATP+ Y GAP G PQ
Sbjct: 217 LSEMQGVYCGNRPMRISTATPKNKGPGVVPGGMGMPGPAGMYPPMGAPPMGFYGAPQPMN 276
Query: 52 ---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF MAI
Sbjct: 277 QFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAI 336
Query: 109 N 109
N
Sbjct: 337 N 337
>gi|317155988|ref|XP_001825498.2| mRNA binding post-transcriptional regulator (Csx1) [Aspergillus
oryzae RIB40]
Length = 404
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 65/121 (53%), Gaps = 12/121 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG-----YASNGAPGQG----PQSEG 51
++EM GVYC +RPMRI ATP+ Y GAP G PQ
Sbjct: 218 LSEMQGVYCGNRPMRISTATPKNKGPGVVPGGMGMPGPAGMYPPMGAPPMGFYGAPQPMN 277
Query: 52 ---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF MAI
Sbjct: 278 QFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAI 337
Query: 109 N 109
N
Sbjct: 338 N 338
>gi|340924065|gb|EGS18968.1| hypothetical protein CTHT_0055850 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 393
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 68/131 (51%), Gaps = 23/131 (17%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ-------------------GGYASNG 41
+ EM GVYC +RPMRI ATP++ S + QY G Y G
Sbjct: 193 LVEMQGVYCGNRPMRISTATPKQRS-HHHQYGHHPPAPMMPPVPGHPAAPPMWGNYPYYG 251
Query: 42 A---PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF 98
P Q D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF
Sbjct: 252 QQYNPIQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQF 311
Query: 99 ANSLGQIMAIN 109
+ MAIN
Sbjct: 312 VHRHAAEMAIN 322
>gi|223973753|gb|ACN31064.1| unknown [Zea mays]
Length = 359
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 64/108 (59%), Gaps = 15/108 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+TEMNG YCS+RPMRIG +K+S +Q++ +S D++N+ +FV
Sbjct: 208 LTEMNGAYCSTRPMRIGPVPKKKNSFRSKQWT---------------ESYHDANNSRLFV 252
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
G LD +VT EDL Q FS YGE+ VK GKGCGFV ++N AI
Sbjct: 253 GQLDQSVTSEDLMQAFSPYGELVDVKALPGKGCGFVTYSNRASAEEAI 300
>gi|171695760|ref|XP_001912804.1| hypothetical protein [Podospora anserina S mat+]
gi|170948122|emb|CAP60286.1| unnamed protein product [Podospora anserina S mat+]
Length = 390
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 66/121 (54%), Gaps = 12/121 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQG---------GYASNGAPGQGPQSEG 51
+ EM GVYC +RPMRI ATP+ +Q GYA AP Q
Sbjct: 193 LVEMQGVYCGNRPMRISTATPKTRYMMPPVPGAQAPMWGGVPPYGYAQPAAPFNPMQPMN 252
Query: 52 ---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF + MAI
Sbjct: 253 QFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAI 312
Query: 109 N 109
N
Sbjct: 313 N 313
>gi|67904206|ref|XP_682359.1| hypothetical protein AN9090.2 [Aspergillus nidulans FGSC A4]
gi|40742733|gb|EAA61923.1| hypothetical protein AN9090.2 [Aspergillus nidulans FGSC A4]
gi|67043519|gb|AAY63883.1| putative RNA binding protein [Emericella nidulans]
gi|259485498|tpe|CBF82571.1| TPA: Putative RNA binding proteinPutative uncharacterized protein ;
[Source:UniProtKB/TrEMBL;Acc:Q5ARJ0] [Aspergillus
nidulans FGSC A4]
Length = 393
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 65/121 (53%), Gaps = 12/121 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG-----YASNGAPGQG----PQSEG 51
++EM GVYC +RPMRI ATP+ Y GAP G PQ
Sbjct: 219 LSEMQGVYCGNRPMRISTATPKNKGPGVVPGGMGMPGPAGMYPPMGAPPMGFYGAPQPMN 278
Query: 52 ---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF MAI
Sbjct: 279 QFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAI 338
Query: 109 N 109
N
Sbjct: 339 N 339
>gi|342875796|gb|EGU77504.1| hypothetical protein FOXB_11986 [Fusarium oxysporum Fo5176]
Length = 405
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 70/131 (53%), Gaps = 22/131 (16%)
Query: 1 MTEMNGVYCSSRPMRIGAATP--RKSSGYQQQYSSQGGYASNGAPGQ------------- 45
+ EM GVYC +RPMRI ATP R + G+ Q GG G P Q
Sbjct: 196 LVEMQGVYCGNRPMRISTATPKNRGNHGFGGQGHHNGGPMMGGMPQQQMWNGGGMQGFGY 255
Query: 46 ---GPQSE----GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF 98
P ++ D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF
Sbjct: 256 GGFNPATQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQF 315
Query: 99 ANSLGQIMAIN 109
+ MAIN
Sbjct: 316 VHRHAAEMAIN 326
>gi|396480654|ref|XP_003841045.1| hypothetical protein LEMA_P089750.1 [Leptosphaeria maculans JN3]
gi|312217619|emb|CBX97566.1| hypothetical protein LEMA_P089750.1 [Leptosphaeria maculans JN3]
Length = 433
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 68/126 (53%), Gaps = 17/126 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYA----------SNGAPGQG---- 46
+TEM GVYC +RPMRI ATP+ SG G S GAP G
Sbjct: 224 LTEMQGVYCGNRPMRISTATPKNKSGGPGGPGGMGMPQQGGGPGMGMYSMGAPPMGYYGA 283
Query: 47 PQSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLG 103
PQ D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF
Sbjct: 284 PQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHA 343
Query: 104 QIMAIN 109
MAIN
Sbjct: 344 AEMAIN 349
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 14/99 (14%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P + ++ ++S GG A +GP+ +IFVG L P VT+ L Q F
Sbjct: 133 GQLIPNSNRPFKLNWASGGGLADRSRDERGPE-------YSIFVGDLGPEVTEFVLVQLF 185
Query: 77 -SQYGEIASVKI---PV---GKGCGFVQFANSLGQIMAI 108
++Y S KI P+ +G GFV+FA+ Q A+
Sbjct: 186 QNKYPSTKSAKIMSDPISGMSRGYGFVRFASEEDQQKAL 224
>gi|440636370|gb|ELR06289.1| hypothetical protein, variant [Geomyces destructans 20631-21]
gi|440636371|gb|ELR06290.1| hypothetical protein GMDG_07882 [Geomyces destructans 20631-21]
Length = 411
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 70/129 (54%), Gaps = 20/129 (15%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQG-------------GYASNGAPGQG- 46
+TEM GVYC +RPMRI ATP+ SG + G G S GAP G
Sbjct: 226 LTEMQGVYCGNRPMRISTATPKNKSGGGGPPGAMGGMPGAPMGGNMAPGMYSMGAPPIGY 285
Query: 47 ---PQSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
PQ D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF
Sbjct: 286 YGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQ 345
Query: 101 SLGQIMAIN 109
MAIN
Sbjct: 346 RHAAEMAIN 354
>gi|302893889|ref|XP_003045825.1| hypothetical protein NECHADRAFT_66100 [Nectria haematococca mpVI
77-13-4]
gi|256726752|gb|EEU40112.1| hypothetical protein NECHADRAFT_66100 [Nectria haematococca mpVI
77-13-4]
Length = 408
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 66/129 (51%), Gaps = 20/129 (15%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGY--------------------QQQYSSQGGYASN 40
+ EM GVYC +RPMRI ATP+ + QQ ++ G+
Sbjct: 202 LVEMQGVYCGNRPMRISTATPKNRGNHGFGHGQHNGGPMMGGGVMPQQQMWNGAQGFYGG 261
Query: 41 GAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
P D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF +
Sbjct: 262 FNPATQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVH 321
Query: 101 SLGQIMAIN 109
MAIN
Sbjct: 322 RHAAEMAIN 330
>gi|261199113|ref|XP_002625958.1| mRNA binding post-transcriptional regulator [Ajellomyces
dermatitidis SLH14081]
gi|239595110|gb|EEQ77691.1| mRNA binding post-transcriptional regulator [Ajellomyces
dermatitidis SLH14081]
gi|327353834|gb|EGE82691.1| hypothetical protein BDDG_05635 [Ajellomyces dermatitidis ATCC
18188]
Length = 399
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 65/123 (52%), Gaps = 14/123 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG-------YASNGAPGQG----PQS 49
+TEM GVYC +RPMRI ATP+ + Y G P G PQ
Sbjct: 218 LTEMQGVYCGNRPMRISTATPKNKGPGAGPGAMGMPGAGPAGMYPPMGGPPMGYYGAPQP 277
Query: 50 EG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIM 106
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF M
Sbjct: 278 MNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEM 337
Query: 107 AIN 109
AIN
Sbjct: 338 AIN 340
>gi|389643224|ref|XP_003719244.1| tRNA selenocysteine-associated protein 1 [Magnaporthe oryzae 70-15]
gi|351639013|gb|EHA46877.1| tRNA selenocysteine-associated protein 1 [Magnaporthe oryzae 70-15]
gi|440462667|gb|ELQ32668.1| tRNA selenocysteine-associated protein 1 [Magnaporthe oryzae Y34]
gi|440489843|gb|ELQ69456.1| tRNA selenocysteine-associated protein 1 [Magnaporthe oryzae P131]
Length = 415
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 73/141 (51%), Gaps = 34/141 (24%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYAS---NGAPG------------- 44
+ EM GVYC +RPMRI ATP+ S QQY +QG + + N P
Sbjct: 199 LVEMQGVYCGNRPMRISTATPKTRS--HQQYGNQGPHGAGPMNMTPPAQNMQWGMNPYGY 256
Query: 45 QGPQSE----------------GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP 88
Q PQ+ D +NTT+FVGGL VT+++LR F +G+I VKIP
Sbjct: 257 QQPQAPPPNTAFNNPMQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGDITYVKIP 316
Query: 89 VGKGCGFVQFANSLGQIMAIN 109
GKGCGFVQF + MAIN
Sbjct: 317 PGKGCGFVQFVHRHAAEMAIN 337
>gi|398412748|ref|XP_003857692.1| hypothetical protein MYCGRDRAFT_65137 [Zymoseptoria tritici IPO323]
gi|339477577|gb|EGP92668.1| hypothetical protein MYCGRDRAFT_65137 [Zymoseptoria tritici IPO323]
Length = 437
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 67/129 (51%), Gaps = 20/129 (15%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYA-------------SNGAPGQG- 46
+ EM GVYC +RPMRI ATP+ SG G S GAP G
Sbjct: 225 LHEMQGVYCGNRPMRISTATPKNKSGAGGPGGMPGMGPPGGPGGNPNMGMYSMGAPPMGY 284
Query: 47 ---PQSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
PQ D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF
Sbjct: 285 YGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQ 344
Query: 101 SLGQIMAIN 109
MAIN
Sbjct: 345 RHAAEMAIN 353
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 50/110 (45%), Gaps = 18/110 (16%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P + ++ ++S GG A +GP+ +IFVG L P V + L F
Sbjct: 134 GQVIPNSNRQFKLNWASGGGLADRSRDDRGPE-------FSIFVGDLGPEVNEYVLMSLF 186
Query: 77 S-QYGEIASVKI---PV---GKGCGFVQFANSLGQIMAINGVGHTMEGKF 119
+Y S KI P+ +G GFV+FA+ Q A+ H M+G +
Sbjct: 187 QGKYTSCKSAKIMSDPISGMSRGYGFVRFADEQDQQKAL----HEMQGVY 232
>gi|225680559|gb|EEH18843.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 400
Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/124 (45%), Positives = 66/124 (53%), Gaps = 15/124 (12%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG--------YASNGAPGQG----PQ 48
+TEM GVYC +RPMRI ATP+ + G Y G P G PQ
Sbjct: 218 LTEMQGVYCGNRPMRISTATPKNKGPGAGPGGAMGMPGAGPAGMYPPMGGPPMGYYGAPQ 277
Query: 49 SEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQI 105
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF
Sbjct: 278 PMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAE 337
Query: 106 MAIN 109
MAIN
Sbjct: 338 MAIN 341
>gi|384484722|gb|EIE76902.1| hypothetical protein RO3G_01606 [Rhizopus delemar RA 99-880]
Length = 204
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 67/108 (62%), Gaps = 7/108 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+TEMNG+ C +RPMR+ ATP+ ++ Q++Y A Q D +NTT+F+
Sbjct: 27 VTEMNGILCKNRPMRVSFATPKTNN--QERYIQLALQAPALV-----QQPTDPNNTTVFI 79
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
GGL VT+++LRQ F +G+I +VK+P GKGCGFVQ+ + AI
Sbjct: 80 GGLSSPVTEDELRQYFGSFGDIMNVKLPPGKGCGFVQYTTRISAETAI 127
>gi|429854847|gb|ELA29832.1| mRNA binding post-transcriptional regulator, partial
[Colletotrichum gloeosporioides Nara gc5]
Length = 366
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/134 (41%), Positives = 71/134 (52%), Gaps = 25/134 (18%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQ-----------------------GG 36
+ EM GVYC +RPMRI ATP+ ++ G Q + +Q G
Sbjct: 209 LVEMQGVYCGNRPMRISTATPKNRNHGPYQHHGNQMMAPGLPPHQQGFYGVPSPAQYGGA 268
Query: 37 Y-ASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGF 95
Y A PGQ D +NTT+FVGGL VT+++LR F +GEI V+IP GKGCGF
Sbjct: 269 YGAPYNPPGQQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVQIPPGKGCGF 328
Query: 96 VQFANSLGQIMAIN 109
VQF + MAIN
Sbjct: 329 VQFVHRHAAEMAIN 342
>gi|119177688|ref|XP_001240593.1| hypothetical protein CIMG_07756 [Coccidioides immitis RS]
Length = 401
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/124 (46%), Positives = 68/124 (54%), Gaps = 15/124 (12%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKS--SGYQQQYSSQGGYASN------GAPGQG----PQ 48
+TEM GVYC +RPMRI ATP+ SG Q G + G P G PQ
Sbjct: 219 LTEMQGVYCGNRPMRISTATPKNKGPSGAPGQMGMPGAPPAGMYPPAMGGPPMGYYGAPQ 278
Query: 49 SEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQI 105
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF
Sbjct: 279 PMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAE 338
Query: 106 MAIN 109
MAIN
Sbjct: 339 MAIN 342
>gi|295661580|ref|XP_002791345.1| mRNA binding post-transcriptional regulator (Csx1)
[Paracoccidioides sp. 'lutzii' Pb01]
gi|226280907|gb|EEH36473.1| mRNA binding post-transcriptional regulator (Csx1)
[Paracoccidioides sp. 'lutzii' Pb01]
Length = 400
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/124 (45%), Positives = 66/124 (53%), Gaps = 15/124 (12%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG--------YASNGAPGQG----PQ 48
+TEM GVYC +RPMRI ATP+ + G Y G P G PQ
Sbjct: 218 LTEMQGVYCGNRPMRISTATPKNKGPGAGPGGAMGMPGAGPAGMYPPMGGPPMGYYGAPQ 277
Query: 49 SEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQI 105
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF
Sbjct: 278 PMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAE 337
Query: 106 MAIN 109
MAIN
Sbjct: 338 MAIN 341
>gi|226292803|gb|EEH48223.1| mRNA binding post-transcriptional regulator (Csx1)
[Paracoccidioides brasiliensis Pb18]
Length = 400
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/124 (45%), Positives = 66/124 (53%), Gaps = 15/124 (12%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG--------YASNGAPGQG----PQ 48
+TEM GVYC +RPMRI ATP+ + G Y G P G PQ
Sbjct: 218 LTEMQGVYCGNRPMRISTATPKNKGPGAGPGGAMGMPGAGPAGMYPPMGGPPMGYYGAPQ 277
Query: 49 SEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQI 105
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF
Sbjct: 278 PMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAE 337
Query: 106 MAIN 109
MAIN
Sbjct: 338 MAIN 341
>gi|303315831|ref|XP_003067920.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240107596|gb|EER25775.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320032017|gb|EFW13973.1| mRNA binding post-transcriptional regulator [Coccidioides posadasii
str. Silveira]
gi|392867443|gb|EAS29326.2| mRNA binding post-transcriptional regulator [Coccidioides immitis
RS]
Length = 400
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/124 (46%), Positives = 68/124 (54%), Gaps = 15/124 (12%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKS--SGYQQQYSSQGGYASN------GAPGQG----PQ 48
+TEM GVYC +RPMRI ATP+ SG Q G + G P G PQ
Sbjct: 219 LTEMQGVYCGNRPMRISTATPKNKGPSGAPGQMGMPGAPPAGMYPPAMGGPPMGYYGAPQ 278
Query: 49 SEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQI 105
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF
Sbjct: 279 PMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAE 338
Query: 106 MAIN 109
MAIN
Sbjct: 339 MAIN 342
>gi|189197507|ref|XP_001935091.1| mRNA binding post-transcriptional regulator (Csx1) [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187981039|gb|EDU47665.1| mRNA binding post-transcriptional regulator (Csx1) [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 490
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/127 (45%), Positives = 68/127 (53%), Gaps = 18/127 (14%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG-----------YASNGAPGQG--- 46
+TEM GVYC +RPMRI ATP+ SG G Y+ N P G
Sbjct: 235 LTEMQGVYCGNRPMRISTATPKNKSGGPGGPGGMGMPQGGGGPGMGMYSMNAPPMGGYYG 294
Query: 47 -PQSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSL 102
PQ D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF
Sbjct: 295 TPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRH 354
Query: 103 GQIMAIN 109
MAIN
Sbjct: 355 AAEMAIN 361
>gi|255073999|ref|XP_002500674.1| predicted protein [Micromonas sp. RCC299]
gi|226515937|gb|ACO61932.1| predicted protein [Micromonas sp. RCC299]
Length = 440
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/117 (43%), Positives = 62/117 (52%), Gaps = 10/117 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQ---GPQSEGDSSNTT 57
+ EMNGV C SR MRI A PRK P+ E N+T
Sbjct: 168 LVEMNGVPCGSRVMRISLAIPRKGVDGVGGGGVGSNTGVGSNGVGGSPAPEPE----NST 223
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF---ANSLGQIMAINGV 111
+FVGGLDP +T+ DLR F +GE+ VKIP GKGCGFVQF A++ I A+NG
Sbjct: 224 VFVGGLDPTLTEPDLRTHFEAFGELVYVKIPAGKGCGFVQFTRRADAEASIQALNGT 280
>gi|320587473|gb|EFW99953.1| mRNA-binding post-transcriptional regulator [Grosmannia clavigera
kw1407]
Length = 399
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 69/135 (51%), Gaps = 26/135 (19%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSS-----GYQQQYSSQGGYASNGA------------- 42
+ EM GVYC +RPMRI ATP+ S G Q+ G A
Sbjct: 194 LVEMQGVYCGNRPMRISTATPKTRSHQYGQGQHGQHMPAHGPAQGNMGWGGMGNGGNGGY 253
Query: 43 --PGQGPQSE------GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG 94
PG GP + D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCG
Sbjct: 254 YQPGFGPMAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCG 313
Query: 95 FVQFANSLGQIMAIN 109
FVQF + MAIN
Sbjct: 314 FVQFVHRHAAEMAIN 328
>gi|330935675|ref|XP_003305076.1| hypothetical protein PTT_17823 [Pyrenophora teres f. teres 0-1]
gi|311318022|gb|EFQ86789.1| hypothetical protein PTT_17823 [Pyrenophora teres f. teres 0-1]
Length = 471
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 67/130 (51%), Gaps = 24/130 (18%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSG---------------------YQQQYSSQGGYAS 39
+TEM GVYC +RPMRI ATP+ SG Y GGY
Sbjct: 216 LTEMQGVYCGNRPMRISTATPKNKSGGPGGPGGMGMPQGGGGPGMGMYSMNAPPMGGYY- 274
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
G P Q D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF
Sbjct: 275 -GTP-QPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFV 332
Query: 100 NSLGQIMAIN 109
MAIN
Sbjct: 333 QRHAAEMAIN 342
>gi|225562584|gb|EEH10863.1| RNA-binding protein [Ajellomyces capsulatus G186AR]
Length = 427
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 65/123 (52%), Gaps = 14/123 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG-------YASNGAPGQG----PQS 49
+TEM GVYC +RPMRI ATP+ + + G P G PQ
Sbjct: 232 LTEMQGVYCGNRPMRISTATPKNKGAGAGPGAMGMPGAGPAGMFPPMGGPPMGYYGAPQP 291
Query: 50 EG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIM 106
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF M
Sbjct: 292 MNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEM 351
Query: 107 AIN 109
AIN
Sbjct: 352 AIN 354
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 14/99 (14%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P S ++ ++S GG A +GP+ +IFVG L P V + L F
Sbjct: 141 GTPIPNTSRTFKLNWASGGGLADRSREERGPE-------FSIFVGDLGPEVNEYVLVSLF 193
Query: 77 -SQYGEIASVKI---PV---GKGCGFVQFANSLGQIMAI 108
S++ S KI P+ +G GFV+F++ Q A+
Sbjct: 194 QSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRAL 232
>gi|453086344|gb|EMF14386.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 425
Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 67/133 (50%), Gaps = 24/133 (18%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSG-----------------YQQQYSSQGGYASNGAP 43
+ EM GVYC +RPMRI ATP+ SG G S GAP
Sbjct: 236 LHEMQGVYCGNRPMRISTATPKNKSGGAAVPPGGMPQPGMPGGPAAGGPQMPGMYSMGAP 295
Query: 44 GQG----PQSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFV 96
G PQ D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFV
Sbjct: 296 PMGYYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFV 355
Query: 97 QFANSLGQIMAIN 109
QF MAIN
Sbjct: 356 QFVQRHAAEMAIN 368
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 18/110 (16%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P + ++ ++S GG A +GP+ +IFVG L P V + L F
Sbjct: 145 GQVIPNSNRQFKLNWASGGGLADRSRDDRGPE-------YSIFVGDLGPEVNEYVLMSLF 197
Query: 77 -SQYGEIASVKI---PV---GKGCGFVQFANSLGQIMAINGVGHTMEGKF 119
++Y S KI P+ +G GFV+FA+ Q A+ H M+G +
Sbjct: 198 QNKYPSCKSAKIMSDPISGMSRGYGFVRFADEQDQQKAL----HEMQGVY 243
>gi|240280986|gb|EER44489.1| mRNA binding post-transcriptional regulator [Ajellomyces capsulatus
H143]
gi|325092520|gb|EGC45830.1| mRNA binding post-transcriptional regulator [Ajellomyces capsulatus
H88]
Length = 399
Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 65/123 (52%), Gaps = 14/123 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG-------YASNGAPGQG----PQS 49
+TEM GVYC +RPMRI ATP+ + + G P G PQ
Sbjct: 218 LTEMQGVYCGNRPMRISTATPKNKGAGAGPGAMGMPGAGPAGMFPPMGGPPMGYYGAPQP 277
Query: 50 EG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIM 106
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF M
Sbjct: 278 MNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEM 337
Query: 107 AIN 109
AIN
Sbjct: 338 AIN 340
Score = 35.4 bits (80), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 14/99 (14%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P S ++ ++S GG A +GP+ +IFVG L P V + L F
Sbjct: 127 GTPIPNTSRTFKLNWASGGGLADRSREERGPE-------FSIFVGDLGPEVNEYVLVSLF 179
Query: 77 -SQYGEIASVKI---PV---GKGCGFVQFANSLGQIMAI 108
S++ S KI P+ +G GFV+F++ Q A+
Sbjct: 180 QSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRAL 218
>gi|46122719|ref|XP_385913.1| hypothetical protein FG05737.1 [Gibberella zeae PH-1]
Length = 409
Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 69/131 (52%), Gaps = 22/131 (16%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGY------------------QQQYSSQGGYASNGA 42
+ EM GVYC +RPMRI ATP+ + QQQ + GG
Sbjct: 201 LVEMQGVYCGNRPMRISTATPKNRGNHGFGGQGHQHGGPMMPGMPQQQMWNGGGMQGFPY 260
Query: 43 PGQGPQSE----GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF 98
G P ++ D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF
Sbjct: 261 GGFNPATQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQF 320
Query: 99 ANSLGQIMAIN 109
+ MAIN
Sbjct: 321 VHRHAAEMAIN 331
>gi|154279514|ref|XP_001540570.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150412513|gb|EDN07900.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 422
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 65/123 (52%), Gaps = 14/123 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG-------YASNGAPGQG----PQS 49
+TEM GVYC +RPMRI ATP+ + + G P G PQ
Sbjct: 242 LTEMQGVYCGNRPMRISTATPKNKGAGAGPGAMGMPGAGPAGMFPPMGGPPMGYYGAPQP 301
Query: 50 EG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIM 106
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF M
Sbjct: 302 MNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEM 361
Query: 107 AIN 109
AIN
Sbjct: 362 AIN 364
Score = 35.4 bits (80), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 14/99 (14%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P S ++ ++S GG A +GP+ +IFVG L P V + L F
Sbjct: 151 GTPIPNTSRTFKLNWASGGGLADRSREERGPE-------FSIFVGDLGPEVNEYVLVSLF 203
Query: 77 -SQYGEIASVKI---PV---GKGCGFVQFANSLGQIMAI 108
S++ S KI P+ +G GFV+F++ Q A+
Sbjct: 204 QSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRAL 242
>gi|169616740|ref|XP_001801785.1| hypothetical protein SNOG_11545 [Phaeosphaeria nodorum SN15]
gi|111060133|gb|EAT81253.1| hypothetical protein SNOG_11545 [Phaeosphaeria nodorum SN15]
Length = 408
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/127 (45%), Positives = 68/127 (53%), Gaps = 18/127 (14%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYA-----------SNGAPGQG--- 46
+T+M GVYC +RPMRI ATP+ SG G S GAP G
Sbjct: 213 LTDMQGVYCGNRPMRISTATPKNKSGGPGGPGGMGMQQGGPGGPGMGMYSMGAPPMGYYG 272
Query: 47 -PQSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSL 102
PQ D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF
Sbjct: 273 APQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRH 332
Query: 103 GQIMAIN 109
MAIN
Sbjct: 333 AAEMAIN 339
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 14/99 (14%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P + ++ ++S GG A +GP+ +IFVG L P VT+ L Q F
Sbjct: 122 GQLIPNSNRPFKLNWASGGGLADRSRDERGPE-------YSIFVGDLGPEVTEFVLVQLF 174
Query: 77 -SQYGEIASVKI---PV---GKGCGFVQFANSLGQIMAI 108
++Y S KI P+ +G GFV+FA+ Q A+
Sbjct: 175 QNKYRSTKSAKIMSDPISGMSRGYGFVRFADEADQQKAL 213
>gi|408392147|gb|EKJ71507.1| hypothetical protein FPSE_08320 [Fusarium pseudograminearum CS3096]
Length = 442
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 69/132 (52%), Gaps = 23/132 (17%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGY-------------------QQQYSSQGGYASNG 41
+ EM GVYC +RPMRI ATP+ + QQQ + GG
Sbjct: 201 LVEMQGVYCGNRPMRISTATPKNRGNHGFGGQGHQHGGPMMPGMPQQQQMWNGGGMQGFP 260
Query: 42 APGQGPQSE----GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQ 97
G P ++ D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQ
Sbjct: 261 YGGFNPATQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQ 320
Query: 98 FANSLGQIMAIN 109
F + MAIN
Sbjct: 321 FVHRHAAEMAIN 332
>gi|407925486|gb|EKG18497.1| hypothetical protein MPH_04299 [Macrophomina phaseolina MS6]
Length = 311
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 67/125 (53%), Gaps = 16/125 (12%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASN---------GAPGQG----P 47
+ EM GVYC +RPMRI ATP+ SG GG GAP G P
Sbjct: 127 LNEMQGVYCGNRPMRISTATPKNKSGGGPGAGPMGGMHGGPGPVGMYGMGAPPLGYYGAP 186
Query: 48 QSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQ 104
Q D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF
Sbjct: 187 QPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAA 246
Query: 105 IMAIN 109
MAIN
Sbjct: 247 EMAIN 251
>gi|367053249|ref|XP_003657003.1| hypothetical protein THITE_2132116 [Thielavia terrestris NRRL 8126]
gi|347004268|gb|AEO70667.1| hypothetical protein THITE_2132116 [Thielavia terrestris NRRL 8126]
Length = 396
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 69/133 (51%), Gaps = 27/133 (20%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAP----------------G 44
+ EM GVYC +R MRI ATP+ S Q+ G A+ P G
Sbjct: 193 LVEMQGVYCGNRAMRISTATPKSRS---HQFGHHGHGATQMMPPIAGHPGPMWGVPSYYG 249
Query: 45 QGPQSEG--------DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFV 96
Q P ++ D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFV
Sbjct: 250 QQPFNQHIAPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFV 309
Query: 97 QFANSLGQIMAIN 109
QF + MAIN
Sbjct: 310 QFVHRHAAEMAIN 322
>gi|149391493|gb|ABR25764.1| nucleic acid binding protein [Oryza sativa Indica Group]
Length = 151
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 63/89 (70%), Gaps = 2/89 (2%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMA 107
S+GDS+N T++VGGLDPNV++++LR+ F++YG++ASVKIP+GK CGFVQF + A
Sbjct: 15 HSDGDSTNRTVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQCGFVQFVSRTDAEEA 74
Query: 108 INGVGHTMEGK--FMMVMGMLFRHQMTQA 134
+ G+ ++ GK + G H+ ++A
Sbjct: 75 LQGLNGSVIGKQAVRLSWGRSPSHKQSRA 103
>gi|449471209|ref|XP_004153241.1| PREDICTED: polyadenylate-binding protein RBP45-like, partial
[Cucumis sativus]
Length = 156
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/56 (73%), Positives = 45/56 (80%)
Query: 45 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
QG Q+E D +NTTIFVG LD NVTDE LRQ F QYGE+ VKIPVGK CGFVQFA+
Sbjct: 6 QGAQNENDPNNTTIFVGNLDANVTDEHLRQVFGQYGELVHVKIPVGKRCGFVQFAD 61
>gi|242824554|ref|XP_002488282.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces stipitatus ATCC 10500]
gi|218713203|gb|EED12628.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces stipitatus ATCC 10500]
Length = 392
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 65/123 (52%), Gaps = 14/123 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGY-------ASNGAPGQG----PQS 49
++EM GVYC +RPMRI ATP+ A+ G P G PQ
Sbjct: 212 LSEMQGVYCGNRPMRISTATPKNKGPGVGPGGMGMPGPAGIYPPAAMGGPPMGFYGAPQP 271
Query: 50 EG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIM 106
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF M
Sbjct: 272 MNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEM 331
Query: 107 AIN 109
AIN
Sbjct: 332 AIN 334
>gi|242824548|ref|XP_002488281.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces stipitatus ATCC 10500]
gi|218713202|gb|EED12627.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces stipitatus ATCC 10500]
Length = 393
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 65/123 (52%), Gaps = 14/123 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGY-------ASNGAPGQG----PQS 49
++EM GVYC +RPMRI ATP+ A+ G P G PQ
Sbjct: 212 LSEMQGVYCGNRPMRISTATPKNKGPGVGPGGMGMPGPAGIYPPAAMGGPPMGFYGAPQP 271
Query: 50 EG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIM 106
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF M
Sbjct: 272 MNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEM 331
Query: 107 AIN 109
AIN
Sbjct: 332 AIN 334
>gi|212546039|ref|XP_002153173.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces marneffei ATCC 18224]
gi|210064693|gb|EEA18788.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces marneffei ATCC 18224]
Length = 392
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 65/123 (52%), Gaps = 14/123 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGY-------ASNGAPGQG----PQS 49
++EM GVYC +RPMRI ATP+ A+ G P G PQ
Sbjct: 212 LSEMQGVYCGNRPMRISTATPKNKGPGVGPGGMGMPGPAGIYPPAAMGGPPMGFYGAPQP 271
Query: 50 EG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIM 106
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF M
Sbjct: 272 MNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEM 331
Query: 107 AIN 109
AIN
Sbjct: 332 AIN 334
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 15/107 (14%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQ----GPQSEGDSSNTTIFVGGLDPNVTDEDL 72
GA TP ++ Q S +A G PG+ PQ GD TT+++G L+P + + +
Sbjct: 19 GAPTPADTNMTGQADPSPAPFA--GTPGEPSAAAPQQGGDGK-TTLWMGELEPWIDENFI 75
Query: 73 RQPFSQYGEIASVKIPVGKGCG------FVQF--ANSLGQIMAINGV 111
R + Q GE +VK+ K G FV F A + G+ +++NG
Sbjct: 76 RNLWFQMGEQVNVKMIRDKFSGSNAGYCFVDFSSAAAAGKALSLNGT 122
>gi|361131740|gb|EHL03392.1| putative Uncharacterized RNA-binding protein C23E6.01c [Glarea
lozoyensis 74030]
Length = 391
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 68/135 (50%), Gaps = 26/135 (19%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYA------------------SNGA 42
+TEM GVYC +RPMRI ATP+ SG + S GA
Sbjct: 200 LTEMQGVYCGNRPMRISTATPKNKSGGAGGPAGMPMQGGGGMGGGQPGGMGAPGMYSMGA 259
Query: 43 PGQ-----GPQSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG 94
P Q PQ D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCG
Sbjct: 260 PPQLGYYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCG 319
Query: 95 FVQFANSLGQIMAIN 109
FVQF MAIN
Sbjct: 320 FVQFVQRHAAEMAIN 334
>gi|258576821|ref|XP_002542592.1| hypothetical protein UREG_02108 [Uncinocarpus reesii 1704]
gi|237902858|gb|EEP77259.1| hypothetical protein UREG_02108 [Uncinocarpus reesii 1704]
Length = 399
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 65/124 (52%), Gaps = 15/124 (12%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYA--------SNGAPGQG----PQ 48
+TEM GVYC +RPMRI ATP+ A + G P G PQ
Sbjct: 215 LTEMQGVYCGNRPMRISTATPKNKGPAGGPGQMGMPGAPPAGMYPPAMGGPPMGYYGTPQ 274
Query: 49 SEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQI 105
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF
Sbjct: 275 PMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAE 334
Query: 106 MAIN 109
MAIN
Sbjct: 335 MAIN 338
>gi|378727642|gb|EHY54101.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 398
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 69/133 (51%), Gaps = 31/133 (23%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPG---------------- 44
+TEM GVYC +RPMRI ATP K+ G Q A+ G PG
Sbjct: 216 LTEMQGVYCGNRPMRISTATP-KNKGLPMQG------ANMGMPGPAGPMGYPPMGGPPMP 268
Query: 45 -----QGPQSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFV 96
Q PQ D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFV
Sbjct: 269 YYGQQQTPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFV 328
Query: 97 QFANSLGQIMAIN 109
QF MAIN
Sbjct: 329 QFVQRHAAEMAIN 341
>gi|302420775|ref|XP_003008218.1| RNA-binding post-transcriptional regulator csx1 [Verticillium
albo-atrum VaMs.102]
gi|261353869|gb|EEY16297.1| RNA-binding post-transcriptional regulator csx1 [Verticillium
albo-atrum VaMs.102]
Length = 430
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 70/138 (50%), Gaps = 32/138 (23%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGY------------ASNGAPGQGPQ 48
+ EM GVYC +RPMRI ATP+ + Y +Q G+ A G P GPQ
Sbjct: 203 LVEMQGVYCGNRPMRISTATPKNRN--HGPYGAQQGHQMPPAMHPHQPQAFYGVP-PGPQ 259
Query: 49 -----------------SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK 91
D +NTT+FVGGL VT+++LR F +GEI VKIP GK
Sbjct: 260 FNQGYGAAPQFQQQQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGK 319
Query: 92 GCGFVQFANSLGQIMAIN 109
GCGFVQF + MAIN
Sbjct: 320 GCGFVQFVHRHAAEMAIN 337
>gi|346977902|gb|EGY21354.1| RNA-binding post-transcriptional regulator csx1 [Verticillium
dahliae VdLs.17]
Length = 418
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 70/138 (50%), Gaps = 32/138 (23%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGY------------ASNGAPGQGPQ 48
+ EM GVYC +RPMRI ATP+ + Y +Q G+ A G P GPQ
Sbjct: 203 LVEMQGVYCGNRPMRISTATPKNRN--HGPYGAQQGHQMPPAMHPHQPQAFYGVP-PGPQ 259
Query: 49 -----------------SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK 91
D +NTT+FVGGL VT+++LR F +GEI VKIP GK
Sbjct: 260 FNQGYGAAPQFQQQQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGK 319
Query: 92 GCGFVQFANSLGQIMAIN 109
GCGFVQF + MAIN
Sbjct: 320 GCGFVQFVHRHAAEMAIN 337
>gi|409079460|gb|EKM79821.1| hypothetical protein AGABI1DRAFT_57019, partial [Agaricus bisporus
var. burnettii JB137-S8]
Length = 366
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 65/114 (57%), Gaps = 7/114 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR--KSSGYQQQYSSQGGYASNGAPGQGPQ----SEGDSS 54
+ EM+G+YC SRPMRI AT + +SG YS Q S P Q + D
Sbjct: 170 LIEMHGLYCLSRPMRISPATAKFKPASGVSLDYS-QAPPFSAPLPNVDNQPVTLTSNDPY 228
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
NTT+FVGGL P +++E LR F+ +G+I VK+PVGK CGFVQF AI
Sbjct: 229 NTTVFVGGLSPLISEETLRTFFAPFGDIHYVKVPVGKHCGFVQFVRKADAERAI 282
>gi|452844119|gb|EME46053.1| hypothetical protein DOTSEDRAFT_70146 [Dothistroma septosporum
NZE10]
Length = 407
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 65/126 (51%), Gaps = 17/126 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASN----------GAPGQG---- 46
+ EM GVYC +RPMRI ATP+ SG GAP G
Sbjct: 224 LHEMQGVYCGNRPMRISTATPKNKSGGGGPGMPGMQGGMGPGAPGGVYAMGAPPMGYYGA 283
Query: 47 PQSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLG 103
PQ D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF
Sbjct: 284 PQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHA 343
Query: 104 QIMAIN 109
MAIN
Sbjct: 344 AEMAIN 349
Score = 35.4 bits (80), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 50/110 (45%), Gaps = 18/110 (16%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P + ++ ++S GG A +GP+ +IFVG L P V + L F
Sbjct: 133 GQVIPNSNRQFKLNWASGGGLADRSRDDRGPE-------YSIFVGDLGPEVNEYVLMSLF 185
Query: 77 S-QYGEIASVKI---PV---GKGCGFVQFANSLGQIMAINGVGHTMEGKF 119
+Y S KI P+ +G GFV+FA+ Q A+ H M+G +
Sbjct: 186 QGKYTSCKSAKIMSDPISGMSRGYGFVRFADEGDQQKAL----HEMQGVY 231
>gi|406866319|gb|EKD19359.1| RNA-binding protein [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 812
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 69/138 (50%), Gaps = 32/138 (23%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSS---QGGYASNGAPGQGPQSEG------ 51
+TEM GVYC +RPMRI ATP+ +G QGG N PG P + G
Sbjct: 458 LTEMQGVYCGNRPMRISTATPKNKAGGGGPAGMPMQQGG--PNMGPGM-PAAPGMYSMGA 514
Query: 52 --------------------DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK 91
D +NTT+FVGGL VT+++LR F +GEI VKIP GK
Sbjct: 515 PPPMQYGGGYGQQQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGK 574
Query: 92 GCGFVQFANSLGQIMAIN 109
GCGFVQF MAIN
Sbjct: 575 GCGFVQFVQRHAAEMAIN 592
>gi|322705595|gb|EFY97180.1| mRNA binding post-transcriptional regulator [Metarhizium anisopliae
ARSEF 23]
Length = 390
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 66/130 (50%), Gaps = 21/130 (16%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSS-----------------GYQQQYSSQGGYASNGAP 43
+ EM GVYC +RPMRI ATP+ G Q GG
Sbjct: 180 LVEMQGVYCGNRPMRISTATPKNRGNHGFGGPGHHAGGAPMMGGVPQQPMWGGMQGFPYG 239
Query: 44 GQGPQSE----GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
G P ++ D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF
Sbjct: 240 GYNPATQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFV 299
Query: 100 NSLGQIMAIN 109
+ MAIN
Sbjct: 300 HRHAAEMAIN 309
>gi|322694638|gb|EFY86462.1| mRNA binding post-transcriptional regulator [Metarhizium acridum
CQMa 102]
Length = 384
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 66/130 (50%), Gaps = 21/130 (16%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSS-----------------GYQQQYSSQGGYASNGAP 43
+ EM GVYC +RPMRI ATP+ G Q GG
Sbjct: 180 LVEMQGVYCGNRPMRISTATPKNRGNHGFGGPGHHAGGAPMMGGVPQQPMWGGMQGFPYG 239
Query: 44 GQGPQSE----GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
G P ++ D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF
Sbjct: 240 GYNPATQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFV 299
Query: 100 NSLGQIMAIN 109
+ MAIN
Sbjct: 300 HRHAAEMAIN 309
>gi|400600479|gb|EJP68153.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 410
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 66/128 (51%), Gaps = 19/128 (14%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRK------------------SSGYQQQYSSQGGYASNG- 41
+ EM GVYC +RPMRI ATP+ Q ++ G+A G
Sbjct: 200 LVEMQGVYCGNRPMRISTATPKNRGNHGFGHGPHGGPMMGGGMPQQPMWNGMQGFAYGGY 259
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANS 101
P D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF +
Sbjct: 260 NPATQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHR 319
Query: 102 LGQIMAIN 109
MAIN
Sbjct: 320 HAAEMAIN 327
>gi|125586871|gb|EAZ27535.1| hypothetical protein OsJ_11490 [Oryza sativa Japonica Group]
Length = 171
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 48/64 (75%)
Query: 45 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQ 104
QG S+ D +NTT+FVGGLDP+VTDE L+Q FS YGE+ VKIPVGK CGFVQ++N
Sbjct: 22 QGTDSDSDPNNTTVFVGGLDPSVTDEVLKQAFSPYGELVYVKIPVGKRCGFVQYSNRASA 81
Query: 105 IMAI 108
AI
Sbjct: 82 EEAI 85
>gi|425773059|gb|EKV11433.1| MRNA binding post-transcriptional regulator (Csx1), putative
[Penicillium digitatum Pd1]
gi|425778836|gb|EKV16941.1| MRNA binding post-transcriptional regulator (Csx1), putative
[Penicillium digitatum PHI26]
Length = 408
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 62/125 (49%), Gaps = 17/125 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASN----------------GAPG 44
+TEM GVYC +RPMRI ATP+ GAP
Sbjct: 214 LTEMQGVYCGNRPMRISTATPKNKGPGVGGNGGAAMGMPGPAGMYPPMGGPPMPFYGAP- 272
Query: 45 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQ 104
Q D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF
Sbjct: 273 QPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAA 332
Query: 105 IMAIN 109
MAIN
Sbjct: 333 EMAIN 337
>gi|255954935|ref|XP_002568220.1| Pc21g11890 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589931|emb|CAP96086.1| Pc21g11890 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 408
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 62/125 (49%), Gaps = 17/125 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASN----------------GAPG 44
+TEM GVYC +RPMRI ATP+ GAP
Sbjct: 214 LTEMQGVYCGNRPMRISTATPKNKGPGVGGNGGAAMGMPGPAGMYPPMGGPPMPFYGAP- 272
Query: 45 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQ 104
Q D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF
Sbjct: 273 QPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAA 332
Query: 105 IMAIN 109
MAIN
Sbjct: 333 EMAIN 337
>gi|346325712|gb|EGX95309.1| mRNA binding post-transcriptional regulator [Cordyceps militaris
CM01]
Length = 474
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 66/133 (49%), Gaps = 24/133 (18%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRK-----------------------SSGYQQQYSSQGGY 37
+ EM GVYC +RPMRI ATP+ Q ++ G+
Sbjct: 259 LVEMQGVYCGNRPMRISTATPKNRGNHGFGHGHHGGGGPMMGGGMPQQQQQPMWNGMQGF 318
Query: 38 ASNG-APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFV 96
A G P D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFV
Sbjct: 319 AYGGYNPATQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFV 378
Query: 97 QFANSLGQIMAIN 109
QF + MAIN
Sbjct: 379 QFVHRHAAEMAIN 391
>gi|326524666|dbj|BAK04269.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 408
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 68/134 (50%), Gaps = 25/134 (18%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGY---------------QQQYSSQG---GYASNGA 42
+ EM GVYC +RPMRI ATP+ + QQQ + G G+ G
Sbjct: 200 LVEMQGVYCGNRPMRISTATPKNRGNHGFAHGHHNAMMGGMPQQQMWAGGMQQGFPYGGG 259
Query: 43 -------PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGF 95
P D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGF
Sbjct: 260 GGGGGFNPATQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGF 319
Query: 96 VQFANSLGQIMAIN 109
VQF + MAIN
Sbjct: 320 VQFVHRHAAEMAIN 333
>gi|326532404|dbj|BAK05131.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 356
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 62/100 (62%), Gaps = 18/100 (18%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG YCSSRPMRIG AT ++ + +QG Y + + +N+ +FV
Sbjct: 192 MTEMNGAYCSSRPMRIGPAT------FKSDFRTQGTYP-----------DSNRNNSRLFV 234
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
G LD VTDEDL + FS YGE+ +VKI GK CGFV +++
Sbjct: 235 GQLDSCVTDEDLIKAFSPYGEL-TVKIIEGKSCGFVTYSS 273
>gi|347840237|emb|CCD54809.1| hypothetical protein [Botryotinia fuckeliana]
Length = 218
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 63/135 (46%), Gaps = 27/135 (20%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSG--------------------------YQQQYSSQ 34
+TEM GVYC +RPMRI ATP+ SG
Sbjct: 27 LTEMQGVYCGNRPMRISTATPKNKSGGAGPAGMQMQGGGGGGMPGAMGGAPGMYGMGGGP 86
Query: 35 GGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG 94
G P Q D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCG
Sbjct: 87 PMAGYYGTP-QPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCG 145
Query: 95 FVQFANSLGQIMAIN 109
FVQF MAIN
Sbjct: 146 FVQFVQRHAAEMAIN 160
>gi|154296254|ref|XP_001548559.1| hypothetical protein BC1G_12954 [Botryotinia fuckeliana B05.10]
Length = 409
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 63/135 (46%), Gaps = 27/135 (20%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSG--------------------------YQQQYSSQ 34
+TEM GVYC +RPMRI ATP+ SG
Sbjct: 223 LTEMQGVYCGNRPMRISTATPKNKSGGAGPAGMQMQGGGGGGMPGAMGGAPGMYGMGGGP 282
Query: 35 GGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG 94
G P Q D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCG
Sbjct: 283 PMAGYYGTP-QPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCG 341
Query: 95 FVQFANSLGQIMAIN 109
FVQF MAIN
Sbjct: 342 FVQFVQRHAAEMAIN 356
>gi|326495674|dbj|BAJ85933.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 152
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 54/71 (76%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMA 107
S+GDS+N T++VGGLD NV++++LR+ F++YG++ASVKIP+GK CGFVQ+ N A
Sbjct: 14 HSDGDSNNRTVYVGGLDQNVSEDELRKSFAKYGDVASVKIPLGKQCGFVQYVNRTDAEEA 73
Query: 108 INGVGHTMEGK 118
+ G+ + GK
Sbjct: 74 LQGLNGAVIGK 84
>gi|162312303|ref|NP_596601.2| mRNA processing factor (predicted) [Schizosaccharomyces pombe
972h-]
gi|26401571|sp|O60176.2|YG41_SCHPO RecName: Full=Uncharacterized RNA-binding protein C23E6.01c
gi|157310462|emb|CAB83010.2| mRNA processing factor (predicted) [Schizosaccharomyces pombe]
Length = 473
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 65/115 (56%), Gaps = 9/115 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYS------SQGGYASNGAPGQGPQSEGDSS 54
+ EM G C RP+R+G ATP+ + + G+ S P PQ D++
Sbjct: 245 LAEMQGQICGDRPIRVGLATPKSKAHVFSPVNVVPVSMPPVGFYSAAQPV--PQF-ADTA 301
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAIN 109
N+T+FVGGL V++E+L+ F +GEI VKIP GKGCGFVQF N +AIN
Sbjct: 302 NSTVFVGGLSKFVSEEELKYLFQNFGEIVYVKIPPGKGCGFVQFVNRQSAEIAIN 356
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 9/80 (11%)
Query: 36 GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI------P 88
+AS G G +S +S +IFVG L PNV + D+ F S+Y S KI
Sbjct: 168 NWASGG--GLREKSISKASEYSIFVGDLSPNVNEFDVYSLFASRYNSCKSAKIMTDPQTN 225
Query: 89 VGKGCGFVQFANSLGQIMAI 108
V +G GFV+F + Q A+
Sbjct: 226 VSRGYGFVRFTDENDQKSAL 245
>gi|156843736|ref|XP_001644934.1| hypothetical protein Kpol_530p46 [Vanderwaltozyma polyspora DSM
70294]
gi|156115587|gb|EDO17076.1| hypothetical protein Kpol_530p46 [Vanderwaltozyma polyspora DSM
70294]
Length = 587
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 71/151 (47%), Gaps = 42/151 (27%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR------------------------------------KS 24
++EMNGV+C RP+R+ ATPR K+
Sbjct: 287 LSEMNGVWCQGRPLRVAYATPRNNNNIISNQQNTATQLSHHGNSYHNNSHNNGNNRSRKN 346
Query: 25 SGYQQQYSSQGGYASNGAPGQGPQ-SEGDSSN---TTIFVGGLDPNVTDEDLRQPFSQYG 80
S Y Q Y +N GQ PQ S+ +S N +T+F+GGL P + + +R F +G
Sbjct: 347 SSSILNY--QNNYTANTNHGQPPQLSKSNSQNELVSTVFIGGLSPKINESQVRSLFKPFG 404
Query: 81 EIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
I +VK+P GK CGFV+F N + AI G+
Sbjct: 405 NIVNVKLPPGKNCGFVKFENRIDAEAAIQGL 435
>gi|358401132|gb|EHK50447.1| hypothetical protein TRIATDRAFT_297212 [Trichoderma atroviride IMI
206040]
Length = 409
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 63/140 (45%), Gaps = 31/140 (22%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSG-------------------------------YQQ 29
+ EM GVYC +RPMRI ATP+ Y
Sbjct: 181 LVEMQGVYCGNRPMRISTATPKNRGNHGFGHGHQGGPMMGGGMPQQQQMWGGVQNFPYGG 240
Query: 30 QYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
GG N P D +NTT+FVGGL VT+++LR F +GEI VKIP
Sbjct: 241 GGGGGGGGGGNFNPATQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPP 300
Query: 90 GKGCGFVQFANSLGQIMAIN 109
GKGCGFVQF + MAIN
Sbjct: 301 GKGCGFVQFVHRHAAEMAIN 320
>gi|413918499|gb|AFW58431.1| hypothetical protein ZEAMMB73_000058 [Zea mays]
Length = 175
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 55/71 (77%), Gaps = 1/71 (1%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMA 107
S+GDSSN T++VGGLDPNV++++LR+ F++Y ++ASVKIP+GK CGFVQF + A
Sbjct: 40 HSDGDSSNRTVYVGGLDPNVSEDELRKAFAKY-DLASVKIPLGKQCGFVQFVSRTDAEEA 98
Query: 108 INGVGHTMEGK 118
+ G+ ++ GK
Sbjct: 99 LQGLNGSLIGK 109
>gi|303290118|ref|XP_003064346.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226453944|gb|EEH51251.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 420
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 66/119 (55%), Gaps = 3/119 (2%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRK--SSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTI 58
+ EMNG+ C SR MRI A PRK + GYQ G G G G + N T+
Sbjct: 172 LVEMNGLACGSRNMRISLAIPRKNMTVGYQGGGGGGGDGGGGGGGGGGGARDDGDDNCTV 231
Query: 59 FVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEG 117
FVGGL +++D +LR F YGE+ +KIP GKGCGFVQFA AI G+ + + G
Sbjct: 232 FVGGLG-SISDAELRIHFEPYGELVYIKIPHGKGCGFVQFAQRSCAEAAIAGLNNALIG 289
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P Y+ ++S G A G G + +S++ +IFVG L P V D L++ F
Sbjct: 76 GTQMPNAQQNYRLNWASFGVGARFAGGGDGGAT--NSNDHSIFVGDLPPEVNDFMLQEVF 133
Query: 77 -SQYGEIASVKIPV------GKGCGFVQFAN 100
S+Y + + ++ KG GFV+FA+
Sbjct: 134 SSRYASVRNARVVTDPATGRSKGFGFVRFAD 164
>gi|340521165|gb|EGR51400.1| RNA-binding protein [Trichoderma reesei QM6a]
Length = 441
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 61/137 (44%), Gaps = 28/137 (20%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSS----------------------------GYQQQYS 32
+ EM GVYC +RPMRI ATP+ +
Sbjct: 220 LVEMQGVYCGNRPMRISTATPKNRGNHGFGHGHQGGPMMGGGMPQQQMWGGVQAFPYGGG 279
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG 92
N P D +NTT+FVGGL VT+++LR F +GEI VKIP GKG
Sbjct: 280 GAAAAGGNFNPATQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKG 339
Query: 93 CGFVQFANSLGQIMAIN 109
CGFVQF + MAIN
Sbjct: 340 CGFVQFVHRHAAEMAIN 356
>gi|210075649|ref|XP_502423.2| YALI0D04917p [Yarrowia lipolytica]
gi|199425763|emb|CAG80611.2| YALI0D04917p [Yarrowia lipolytica CLIB122]
Length = 430
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 69/138 (50%), Gaps = 30/138 (21%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQ----------------QQYSSQGGYAS--NGA 42
+ EM G SRP+R+ ATP+ +Q QQ SQ + NGA
Sbjct: 149 LQEMQGYMLGSRPLRVSTATPKNRHHHQPYMQFQPQQFQPPAHYQQLHSQHPFPHHPNGA 208
Query: 43 PGQ--------GPQSE----GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG 90
P GP D++NTT+FVGGL +V++++LRQ F +G+I VKIP G
Sbjct: 209 PSHQVHQPFYGGPAHPLNQFTDANNTTVFVGGLSSSVSEDELRQYFQGFGDITYVKIPPG 268
Query: 91 KGCGFVQFANSLGQIMAI 108
KGCGFVQ+ MAI
Sbjct: 269 KGCGFVQYVQRQSAEMAI 286
>gi|302841234|ref|XP_002952162.1| hypothetical protein VOLCADRAFT_32547 [Volvox carteri f.
nagariensis]
gi|300262427|gb|EFJ46633.1| hypothetical protein VOLCADRAFT_32547 [Volvox carteri f.
nagariensis]
Length = 193
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 60/115 (52%), Gaps = 27/115 (23%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQ------------ 48
+ EMNGV+ SSRP+R+ AT R+ G PG G +
Sbjct: 63 VVEMNGVFISSRPVRVSVATARRIDG------------GPLVPGGGSRVPGSGPGGGGGG 110
Query: 49 ---SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
E D +NTT+F+GGL VT++ LR F +YGEI KIP GKGCGFVQF +
Sbjct: 111 GALGEADPNNTTLFIGGLSSGVTEDQLRGVFGRYGEIIYTKIPPGKGCGFVQFID 165
>gi|302656875|ref|XP_003020176.1| hypothetical protein TRV_05751 [Trichophyton verrucosum HKI 0517]
gi|291183977|gb|EFE39558.1| hypothetical protein TRV_05751 [Trichophyton verrucosum HKI 0517]
Length = 281
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 65/147 (44%), Gaps = 49/147 (33%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAP----------------- 43
++EM GVYC +RPMRI ATP+ G A G P
Sbjct: 87 LSEMQGVYCGNRPMRISTATPKNK-----------GPAGPGGPAHMGVPGGPPGGMYPPS 135
Query: 44 ------------------GQGPQSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEI 82
G PQ D +NTT+FVGGL VT+++LR F +GEI
Sbjct: 136 MGGAGGPPGPGGPQMGYYGAAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEI 195
Query: 83 ASVKIPVGKGCGFVQFANSLGQIMAIN 109
VKIP GKGCGFVQF MAIN
Sbjct: 196 TYVKIPPGKGCGFVQFVQRHAAEMAIN 222
>gi|302511659|ref|XP_003017781.1| hypothetical protein ARB_04665 [Arthroderma benhamiae CBS 112371]
gi|291181352|gb|EFE37136.1| hypothetical protein ARB_04665 [Arthroderma benhamiae CBS 112371]
Length = 428
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 65/147 (44%), Gaps = 49/147 (33%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAP----------------- 43
++EM GVYC +RPMRI ATP+ G A G P
Sbjct: 234 LSEMQGVYCGNRPMRISTATPKNK-----------GPAGPGGPAHMGVPGGPPGGMYPPS 282
Query: 44 ------------------GQGPQSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEI 82
G PQ D +NTT+FVGGL VT+++LR F +GEI
Sbjct: 283 MGGAGGPPGPGGPQMGYYGAAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEI 342
Query: 83 ASVKIPVGKGCGFVQFANSLGQIMAIN 109
VKIP GKGCGFVQF MAIN
Sbjct: 343 TYVKIPPGKGCGFVQFVQRHAAEMAIN 369
>gi|327296686|ref|XP_003233037.1| hypothetical protein TERG_06034 [Trichophyton rubrum CBS 118892]
gi|326464343|gb|EGD89796.1| hypothetical protein TERG_06034 [Trichophyton rubrum CBS 118892]
Length = 224
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 65/147 (44%), Gaps = 49/147 (33%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAP----------------- 43
++EM GVYC +RPMRI ATP+ G A G P
Sbjct: 27 LSEMQGVYCGNRPMRISTATPKNK-----------GPAGPGGPAHMGVPGGPPGGMYPPS 75
Query: 44 ------------------GQGPQSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEI 82
G PQ D +NTT+FVGGL VT+++LR F +GEI
Sbjct: 76 MGGAGGPPGPGGPQMGYYGAAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEI 135
Query: 83 ASVKIPVGKGCGFVQFANSLGQIMAIN 109
VKIP GKGCGFVQF MAIN
Sbjct: 136 TYVKIPPGKGCGFVQFVQRHAAEMAIN 162
>gi|315043939|ref|XP_003171345.1| RNA-binding post-transcriptional regulator csx1 [Arthroderma
gypseum CBS 118893]
gi|311343688|gb|EFR02891.1| RNA-binding post-transcriptional regulator csx1 [Arthroderma
gypseum CBS 118893]
Length = 412
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 65/147 (44%), Gaps = 49/147 (33%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAP----------------- 43
++EM GVYC +RPMRI ATP+ G A G P
Sbjct: 215 LSEMQGVYCGNRPMRISTATPKNK-----------GPAGPGGPAHMGVPGGPPGGMYPPS 263
Query: 44 ------------------GQGPQSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEI 82
G PQ D +NTT+FVGGL VT+++LR F +GEI
Sbjct: 264 MGGAGGPPGPGGPQMGYYGAAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEI 323
Query: 83 ASVKIPVGKGCGFVQFANSLGQIMAIN 109
VKIP GKGCGFVQF MAIN
Sbjct: 324 TYVKIPPGKGCGFVQFVQRHAAEMAIN 350
>gi|403214377|emb|CCK68878.1| hypothetical protein KNAG_0B04440 [Kazachstania naganishii CBS
8797]
Length = 397
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 82/170 (48%), Gaps = 28/170 (16%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSG----YQQQYSSQGGYASNGAPGQGPQSE------ 50
+ EM GV+ + R +++G ++ + +SG Q + GG G P S
Sbjct: 217 LAEMQGVFLNGRALKVGMSSGQSNSGAGGSRQVGHDRYGGSKPAGGKSNTPNSALFSQFM 276
Query: 51 ------------GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF 98
D +NTT+F+GGL P V +E+LRQ F +GEI VKIPVGKGCGFVQ+
Sbjct: 277 YPIQQQPALNHFTDPNNTTVFIGGLSPLVKEEELRQYFQPFGEIVYVKIPVGKGCGFVQY 336
Query: 99 ANSLGQIMAINGVGHTMEGKFMMVMGMLFRHQMTQACTLQQLRPMGLTLC 148
+ + AI+ M+G + R ++ QQL+ G + C
Sbjct: 337 IDRISAETAIS----QMQG--FPISNSRVRLSWGRSAKQQQLQQHGSSPC 380
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 11/91 (12%)
Query: 37 YASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDL------RQPFSQYGEIA-SVKIPV 89
+AS+ AP S +N +IFVG L PNVT+ L R P +++ ++ + V
Sbjct: 139 WASSSAPSTAGVSTTGGNNFSIFVGDLAPNVTEAQLFDLFISRYPSTEHAKVVIDLSTGV 198
Query: 90 GKGCGFVQFANSLGQIMAINGVGHTMEGKFM 120
KG GF++F + Q A+ M+G F+
Sbjct: 199 SKGYGFIRFRDPADQQTAL----AEMQGVFL 225
>gi|449302980|gb|EMC98988.1| hypothetical protein BAUCODRAFT_386817 [Baudoinia compniacensis
UAMH 10762]
Length = 431
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 65/129 (50%), Gaps = 20/129 (15%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGGYASNGAPGQGPQSEG-------- 51
+ EM GVYC +RPMRI ATP+ KS G G G G G
Sbjct: 234 LHEMQGVYCGNRPMRISTATPKNKSGGGGPGMGGMPGGMQPGMYGMGQPPMSGGGGGGGY 293
Query: 52 -----------DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF +
Sbjct: 294 YPQQQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVH 353
Query: 101 SLGQIMAIN 109
MAIN
Sbjct: 354 RHAAEMAIN 362
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 50/110 (45%), Gaps = 18/110 (16%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P + ++ ++S GG A +GP+ +IFVG L P V + L F
Sbjct: 143 GQMIPNSNRQFKLNWASGGGLADRSRDDRGPE-------YSIFVGDLGPEVNEYVLMSLF 195
Query: 77 S-QYGEIASVKI---PV---GKGCGFVQFANSLGQIMAINGVGHTMEGKF 119
+Y S KI P+ +G GFV+F++ Q A+ H M+G +
Sbjct: 196 QGKYNSCKSAKIMSDPISGMSRGYGFVRFSDEQDQQKAL----HEMQGVY 241
>gi|320580282|gb|EFW94505.1| RNA binding protein [Ogataea parapolymorpha DL-1]
Length = 398
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 67/131 (51%), Gaps = 17/131 (12%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ------GGYASNGAPG-------QGP 47
+ EMNG + R +R+ ATP+ + QQ+ Y + G P Q P
Sbjct: 185 LVEMNGKWLDGRLIRVALATPKHQN---QQFRKHQIPMELDPYHAPGLPPIGYYAAPQPP 241
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMA 107
+ D +NTT+FVGGL N+T+ L F YG+I VK+P GKGCGFV+F A
Sbjct: 242 PAYSDPTNTTVFVGGLSNNITEATLLSIFEPYGQIVHVKVPPGKGCGFVKFTQRTDAERA 301
Query: 108 INGV-GHTMEG 117
I + G+ ++G
Sbjct: 302 IEQLQGYVIDG 312
>gi|19115155|ref|NP_594243.1| RNA-binding protein Csx1 [Schizosaccharomyces pombe 972h-]
gi|3121946|sp|O13759.1|CSX1_SCHPO RecName: Full=RNA-binding post-transcriptional regulator csx1
gi|2656019|emb|CAB16569.1| RNA-binding protein Csx1 [Schizosaccharomyces pombe]
Length = 632
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 67/131 (51%), Gaps = 25/131 (19%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEG--------- 51
+ M G C RP+RI A+P+ S+ A++ A G P S
Sbjct: 241 LMHMQGYLCQGRPLRISVASPK----------SRASIAADSALGIVPTSTSNRQPNQDLC 290
Query: 52 --DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAIN 109
D NTT+FVGGL N++++DL+ F +G I ++KIP GKGCGFVQ++ AIN
Sbjct: 291 SMDPLNTTVFVGGLASNLSEKDLQVCFQPFGRILNIKIPFGKGCGFVQYSEKSAAEKAIN 350
Query: 110 GVGHTMEGKFM 120
TM+G +
Sbjct: 351 ----TMQGALV 357
>gi|242045812|ref|XP_002460777.1| hypothetical protein SORBIDRAFT_02g034736 [Sorghum bicolor]
gi|241924154|gb|EER97298.1| hypothetical protein SORBIDRAFT_02g034736 [Sorghum bicolor]
Length = 171
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 43/54 (79%)
Query: 45 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF 98
QG SE D +NTT+FVGGLD NV +E LRQ F+ +GEI+ VKIPVGK CGFVQF
Sbjct: 6 QGISSENDPNNTTVFVGGLDSNVNEEYLRQIFTPHGEISYVKIPVGKHCGFVQF 59
>gi|358380439|gb|EHK18117.1| hypothetical protein TRIVIDRAFT_117191, partial [Trichoderma virens
Gv29-8]
Length = 417
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 65/136 (47%), Gaps = 27/136 (19%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRK------------------SSGYQQQYSSQGGYASNGA 42
+ EM GVYC +RPMRI ATP+ QQ + G+ G
Sbjct: 201 LVEMQGVYCGNRPMRISTATPKNRGNHGFGHGHQGGPMMGGGMPQQQMWGGVQGFPYGGG 260
Query: 43 ---------PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
P D +NTT+FVGGL VT+++LR F +GEI VKIP GKGC
Sbjct: 261 AGAGGGGFNPATQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGC 320
Query: 94 GFVQFANSLGQIMAIN 109
GFVQF + MAIN
Sbjct: 321 GFVQFVHRHAAEMAIN 336
>gi|159480296|ref|XP_001698220.1| hypothetical protein CHLREDRAFT_193148 [Chlamydomonas reinhardtii]
gi|158273718|gb|EDO99505.1| predicted protein [Chlamydomonas reinhardtii]
Length = 1212
Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 51/121 (42%), Positives = 66/121 (54%), Gaps = 15/121 (12%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASN----GAPGQGPQSEGDSSNT 56
+ EMNGV+ SSR + A+ S+ ASN P Q P E D NT
Sbjct: 71 LNEMNGVFISSRQHTLSASA----------VSALAPCASNTHCRNTPTQLP-GELDPQNT 119
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTME 116
T+FVGGL +V+++ LR F +YGEI+ VKIP GKGCGFV FA+ A+ V T+
Sbjct: 120 TLFVGGLSAHVSEDALRGVFGRYGEISYVKIPPGKGCGFVHFADRQAAEYAMQEVNGTII 179
Query: 117 G 117
G
Sbjct: 180 G 180
>gi|384244508|gb|EIE18010.1| hypothetical protein COCSUDRAFT_31894 [Coccomyxa subellipsoidea
C-169]
Length = 407
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 63/109 (57%), Gaps = 11/109 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQ------QQYSSQG-GYASNGAPG----QGPQS 49
+TEM+G +SRP+R+ AT +KS Q + + GAP Q S
Sbjct: 161 LTEMSGHVINSRPIRVSIATAKKSQTATMLPKQCQNFDFENFRLRVQGAPAPVASQPHPS 220
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF 98
+ D +NTT+F+GGL V+++DLR F ++G+I KIP GKGCGFVQF
Sbjct: 221 DYDPNNTTLFIGGLSSGVSEDDLRVLFGRFGDIVYTKIPPGKGCGFVQF 269
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKI---PV---GKGCGFVQFANSLGQIM 106
S+ ++FVG L P+VTD L++ F Q + + S K+ P+ KG GFV+F N +
Sbjct: 100 SDYSVFVGDLAPDVTDYALQEHFRQFFASVRSAKVITDPLTGRSKGYGFVRFGNEAERDR 159
Query: 107 AINGV-GHTMEGKFMMV 122
++ + GH + + + V
Sbjct: 160 SLTEMSGHVINSRPIRV 176
>gi|426192598|gb|EKV42534.1| hypothetical protein AGABI2DRAFT_229063, partial [Agaricus bisporus
var. bisporus H97]
Length = 396
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 65/142 (45%), Gaps = 34/142 (23%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR---------------------------KSSGYQQQYSS 33
+ EM+G+YC SRPMRI AT + ++ GY S
Sbjct: 171 LIEMHGLYCLSRPMRISPATAKFKPASGVGNGLGVSGLLSEAQLRQVFGQTDGYLMTEES 230
Query: 34 QGGYASNGA-------PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVK 86
+A A P + D NTT+FVGGL P +++E LR F+ +G+I VK
Sbjct: 231 LKHHAHARAILGNLMGPNGEQLTSNDPYNTTVFVGGLSPLISEETLRTFFAPFGDIHYVK 290
Query: 87 IPVGKGCGFVQFANSLGQIMAI 108
+PVGK CGFVQF AI
Sbjct: 291 VPVGKHCGFVQFVRKADAERAI 312
>gi|440795338|gb|ELR16465.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 424
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 59/105 (56%), Gaps = 5/105 (4%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQS-----EGDSSN 55
MTEM G+ SR +R+ ATP+KSS G G G G S + D SN
Sbjct: 193 MTEMQGMMLGSRALRLSQATPKKSSSMGGGMGMPMGMPMGGGGGGGGHSAPMPEQADPSN 252
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
TTIFVG LD V +++LR F +GE+ V++P GK CGFVQF +
Sbjct: 253 TTIFVGNLDSTVGEDELRGHFMPFGELVYVRVPPGKNCGFVQFVH 297
>gi|149392334|gb|ABR25993.1| nucleic acid binding protein [Oryza sativa Indica Group]
Length = 128
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 49/62 (79%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTME 116
T++VGGLDPNV++++LR+ F++YG++ASVKIP+GK CGFVQF + A+ G+ ++
Sbjct: 1 TVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQCGFVQFVSRTDAEEALQGLNGSVI 60
Query: 117 GK 118
GK
Sbjct: 61 GK 62
>gi|254566455|ref|XP_002490338.1| RNA binding protein that negatively regulates growth rate
[Komagataella pastoris GS115]
gi|238030134|emb|CAY68057.1| RNA binding protein that negatively regulates growth rate
[Komagataella pastoris GS115]
gi|328350732|emb|CCA37132.1| Uncharacterized RNA-binding protein C23E6.01c [Komagataella
pastoris CBS 7435]
Length = 506
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 70/122 (57%), Gaps = 14/122 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQ-------QYSSQGG----YASNGAPGQGPQS 49
+ EM+G++ RP+R+ ATPR +G+Q QY+ +ASN + +
Sbjct: 215 LHEMSGIWLGGRPIRVALATPR-GAGHQPVQMQQHLQYAPSAPMVPQFASNNSSSR--NI 271
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAIN 109
D +N+T+FVGGL V++E L F +G I+S+KIP GKGCGFV+F+ AI+
Sbjct: 272 YNDPTNSTVFVGGLAAGVSEETLFTLFEPFGSISSIKIPRGKGCGFVKFSTREEAENAIS 331
Query: 110 GV 111
G+
Sbjct: 332 GM 333
>gi|298706390|emb|CBJ29399.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 434
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 55/109 (50%), Gaps = 17/109 (15%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+T MNG C RP+R+ AT R S GQ D SNTT+FV
Sbjct: 166 LTAMNGAECCGRPIRVAPATKRTS-----------------VQGQTGAHATDPSNTTVFV 208
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAIN 109
GG++ +VT++ LR F+ GEI +V P G+GC FV FA+ IN
Sbjct: 209 GGINDSVTEKVLRDTFNSAGEIQTVTTPPGRGCAFVTFAHRASAEHVIN 257
>gi|213406019|ref|XP_002173781.1| RNA-binding post-transcriptional regulator csx1
[Schizosaccharomyces japonicus yFS275]
gi|212001828|gb|EEB07488.1| RNA-binding post-transcriptional regulator csx1
[Schizosaccharomyces japonicus yFS275]
Length = 680
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 60/134 (44%), Gaps = 25/134 (18%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASN-----------------GAP 43
++EM G C RP+RI A+PR + ++ G AS G P
Sbjct: 243 LSEMQGYLCHGRPLRISVASPRSRTSISADSTTPTGAASTANGGAAASSSAVATGVTGVP 302
Query: 44 GQGPQSEG--------DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGF 95
+ D NTT+FVGGL T++DL FS +G I ++KIP GKGCGF
Sbjct: 303 SSSSSTRQPDQGLCSIDPFNTTVFVGGLFSGATEKDLFYHFSPFGNILNIKIPPGKGCGF 362
Query: 96 VQFANSLGQIMAIN 109
VQ+ AI
Sbjct: 363 VQYTEKAAAEKAIT 376
>gi|290997888|ref|XP_002681513.1| predicted protein [Naegleria gruberi]
gi|284095137|gb|EFC48769.1| predicted protein [Naegleria gruberi]
Length = 292
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 58/114 (50%), Gaps = 11/114 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEM GVY SSRP++I AT + SQG + NTT++V
Sbjct: 168 MTEMQGVYISSRPVKISHAT--------NNFKSQGALEDLMPTTIITTDPLEQENTTVYV 219
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA---NSLGQIMAINGV 111
G L PN ++ LR+ F YG I SVKIP CGF+ F ++ I+ +NG+
Sbjct: 220 GNLSPNTDEKILREFFQGYGPITSVKIPTNSNCGFINFTRTEHAERAIIEMNGI 273
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGF 95
PG P S G + +IFVG L P+V D L Q F ++Y + K+ + KG GF
Sbjct: 96 PGGKPSSGGKENIVSIFVGDLAPDVNDYMLEQTFRNRYPSVRGAKVVMDPKSGISKGYGF 155
Query: 96 VQFAN 100
V+FA+
Sbjct: 156 VKFAD 160
>gi|125549809|gb|EAY95631.1| hypothetical protein OsI_17488 [Oryza sativa Indica Group]
Length = 263
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 42/54 (77%), Gaps = 2/54 (3%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN--SLGQIMAI 108
TIFVGGLDPNVT++ L+Q F+ YGE+ VKIPVGK CGFVQ+ N S Q +A+
Sbjct: 123 TIFVGGLDPNVTEDVLKQVFAPYGEVVHVKIPVGKRCGFVQYVNRPSAEQALAV 176
>gi|449530398|ref|XP_004172182.1| PREDICTED: uncharacterized protein LOC101232188 [Cucumis sativus]
Length = 167
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 39/48 (81%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
S IFVGGLD +V+DEDL+Q FS+ G++ SVKIP+GKGCGF+QF N
Sbjct: 118 SPPLPIFVGGLDYDVSDEDLKQAFSKLGDVVSVKIPIGKGCGFLQFTN 165
>gi|146421272|ref|XP_001486586.1| hypothetical protein PGUG_02257 [Meyerozyma guilliermondii ATCC
6260]
Length = 681
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 62/144 (43%), Gaps = 44/144 (30%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSS---GYQQQYSSQGG------YASNGAPG------- 44
+ EMNG + RP+R+ ATPR S G+Q Y GG Y GAPG
Sbjct: 229 LVEMNGAWFGGRPLRVALATPRSSGKRFGFQNMYPFWGGGAPYYPYGYAGAPGLPDYGNM 288
Query: 45 ----------------------------QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
Q D +NTT+FVGGL +V ++ L F
Sbjct: 289 GGLNEEDDYGGAPPPPPPPPPPGQIPYPPPVQQYTDPNNTTVFVGGLSSDVNEQTLFTLF 348
Query: 77 SQYGEIASVKIPVGKGCGFVQFAN 100
Q+G I +KIP GK CGFV++ N
Sbjct: 349 KQFGIIQQIKIPPGKNCGFVKYTN 372
>gi|190346145|gb|EDK38159.2| hypothetical protein PGUG_02257 [Meyerozyma guilliermondii ATCC
6260]
Length = 681
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 62/144 (43%), Gaps = 44/144 (30%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSS---GYQQQYSSQGG------YASNGAPGQGP---- 47
+ EMNG + RP+R+ ATPR S G+Q Y GG Y GAPG
Sbjct: 229 LVEMNGAWFGGRPLRVALATPRSSGKRFGFQNMYPFWGGGAPYYPYGYAGAPGSPDYGNM 288
Query: 48 -------------------------------QSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
Q D +NTT+FVGGL +V ++ L F
Sbjct: 289 GGLNEEDDYGGAPPPPPPPPPPGQIPYPPPVQQYTDPNNTTVFVGGLSSDVNEQTLFTLF 348
Query: 77 SQYGEIASVKIPVGKGCGFVQFAN 100
Q+G I +KIP GK CGFV++ N
Sbjct: 349 KQFGIIQQIKIPPGKNCGFVKYTN 372
>gi|366996152|ref|XP_003677839.1| hypothetical protein NCAS_0H01810 [Naumovozyma castellii CBS 4309]
gi|342303709|emb|CCC71491.1| hypothetical protein NCAS_0H01810 [Naumovozyma castellii CBS 4309]
Length = 443
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 42/57 (73%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
D +NTT+F+GGL V+++DLRQ F +G+I VKIP GKGCGFVQ+ + L +AI
Sbjct: 279 DPNNTTVFIGGLSSLVSEDDLRQYFQPFGDIIYVKIPTGKGCGFVQYVDRLSAELAI 335
>gi|115385346|ref|XP_001209220.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114196912|gb|EAU38612.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 306
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 66/130 (50%), Gaps = 23/130 (17%)
Query: 1 MTEMNGVYCSSRPMRIGAAT--PRKSSGYQQQYSSQGGYA-------------------S 39
+ + GVYC +P+ ++T P+++ G + GYA S
Sbjct: 113 LADRRGVYCG-KPLPCASSTAHPQETRGPRCCSPGANGYAPARTAACNLPDGPPPPIGPS 171
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
GAP Q D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF
Sbjct: 172 TGAP-QPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFV 230
Query: 100 NSLGQIMAIN 109
MAIN
Sbjct: 231 QRHAAEMAIN 240
>gi|401625439|gb|EJS43448.1| nam8p [Saccharomyces arboricola H-6]
Length = 527
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 43/60 (71%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
D +NTT+F+GGL VT+++LR F +G I VKIPVGKGCGFVQ+ + L AI+G+
Sbjct: 313 DPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGCGFVQYVDRLSAEAAISGM 372
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 11/74 (14%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANSLGQIM 106
+N +IFVG L PNVT+ L + F ++Y + KI + KG GFV+F N+ Q +
Sbjct: 165 NNYSIFVGDLAPNVTESQLFELFINRYASASHAKIVHDQVTGMSKGYGFVKFNNADEQHL 224
Query: 107 AINGVGHTMEGKFM 120
A++ M+G F+
Sbjct: 225 ALS----EMQGVFL 234
>gi|110681486|emb|CAL25353.1| ACBF-like dna binding protein [Platanus x acerifolia]
Length = 216
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/36 (83%), Positives = 34/36 (94%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG 36
++EMNG YCS+RPMR+G ATPRKSSGYQQQYSSQGG
Sbjct: 181 ISEMNGAYCSNRPMRVGVATPRKSSGYQQQYSSQGG 216
>gi|45184976|ref|NP_982694.1| AAR151Wp [Ashbya gossypii ATCC 10895]
gi|44980597|gb|AAS50518.1| AAR151Wp [Ashbya gossypii ATCC 10895]
Length = 481
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 66/161 (40%), Gaps = 50/161 (31%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRK------------------------------------- 23
+ EMNGV+C R +R+ ATPR
Sbjct: 221 LAEMNGVWCQGRQLRVAYATPRNNLLQQQQAHPAPPAPPSPPAPPAQTLPDSLGLLVGVP 280
Query: 24 --------SSGYQQQYSSQGG----YASNGAPGQGP-QSEGDSSNTTIFVGGLDPNVTDE 70
S G QQ G SN P P Q D++NTT+F+GGL +++
Sbjct: 281 SLAQLDAASLGRAQQPLLLGAAGSLVGSNSLPLAAPRQLPADTANTTVFIGGLSNMISEG 340
Query: 71 DLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
L F +G I SVK+P G+GCGFV+F N + AI G+
Sbjct: 341 QLHALFMPFGNILSVKVPPGRGCGFVRFENRMDAEAAIQGM 381
>gi|374105894|gb|AEY94805.1| FAAR151Wp [Ashbya gossypii FDAG1]
Length = 475
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 66/161 (40%), Gaps = 50/161 (31%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRK------------------------------------- 23
+ EMNGV+C R +R+ ATPR
Sbjct: 221 LAEMNGVWCQGRQLRVAYATPRNNLLQQQQAHPAPPAPPSPPAPPAQTLPDSLGLLVGVP 280
Query: 24 --------SSGYQQQYSSQGG----YASNGAPGQGP-QSEGDSSNTTIFVGGLDPNVTDE 70
S G QQ G SN P P Q D++NTT+F+GGL +++
Sbjct: 281 SLAQLDAASLGRAQQPLLLGAAGSLVGSNSLPLAAPRQLPADTANTTVFIGGLSNMISEG 340
Query: 71 DLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
L F +G I SVK+P G+GCGFV+F N + AI G+
Sbjct: 341 QLHALFMPFGNILSVKVPPGRGCGFVRFENRMDAEAAIQGM 381
>gi|349578638|dbj|GAA23803.1| K7_Nam8p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392298893|gb|EIW09988.1| Nam8p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 523
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 42/60 (70%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
D +NTT+F+GGL VT+++LR F +G I VKIPVGKGCGFVQ+ + L AI G+
Sbjct: 309 DPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGCGFVQYVDRLSAEAAIAGM 368
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 11/74 (14%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANSLGQIM 106
+N +IFVG L PNVT+ L + F ++Y + KI + KG GFV+F NS Q +
Sbjct: 161 NNCSIFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQL 220
Query: 107 AINGVGHTMEGKFM 120
A++ M+G F+
Sbjct: 221 ALS----EMQGVFL 230
>gi|384487643|gb|EIE79823.1| hypothetical protein RO3G_04528 [Rhizopus delemar RA 99-880]
Length = 162
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 58/106 (54%), Gaps = 19/106 (17%)
Query: 4 MNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGG 62
M G SRP+R+ ATP+ ++S +Q ++S ++TT+F+GG
Sbjct: 1 MQGYVIGSRPIRVSTATPKQRTSSNKQSFTS------------------SINSTTVFIGG 42
Query: 63 LDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
L + +++LR F+ +G+I VKIP GKGCGFVQ+ +AI
Sbjct: 43 LSTPIKEDELRHYFAPFGDIIYVKIPQGKGCGFVQYTTRSSAELAI 88
>gi|259146840|emb|CAY80096.1| Nam8p [Saccharomyces cerevisiae EC1118]
gi|323348251|gb|EGA82500.1| Nam8p [Saccharomyces cerevisiae Lalvin QA23]
Length = 523
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 42/60 (70%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
D +NTT+F+GGL VT+++LR F +G I VKIPVGKGCGFVQ+ + L AI G+
Sbjct: 309 DPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGCGFVQYVDRLSAEAAIAGM 368
Score = 42.4 bits (98), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 11/74 (14%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANSLGQIM 106
+N +IFVG L PNVT+ L + F ++Y + KI + KG GFV+F NS Q +
Sbjct: 161 NNCSIFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQL 220
Query: 107 AINGVGHTMEGKFM 120
A++ M+G F+
Sbjct: 221 ALS----EMQGVFL 230
>gi|151944033|gb|EDN62326.1| RNA-binding protein [Saccharomyces cerevisiae YJM789]
Length = 523
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 42/60 (70%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
D +NTT+F+GGL VT+++LR F +G I VKIPVGKGCGFVQ+ + L AI G+
Sbjct: 309 DPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGCGFVQYVDRLSAEAAIAGM 368
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 11/74 (14%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANSLGQIM 106
+N +IFVG L NVT+ L + F ++Y + KI + KG GFV+F NS Q +
Sbjct: 161 NNCSIFVGDLAANVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQL 220
Query: 107 AINGVGHTMEGKFM 120
A++ M+G F+
Sbjct: 221 ALS----EMQGVFL 230
>gi|444313983|ref|XP_004177649.1| hypothetical protein TBLA_0A03300 [Tetrapisispora blattae CBS 6284]
gi|387510688|emb|CCH58130.1| hypothetical protein TBLA_0A03300 [Tetrapisispora blattae CBS 6284]
Length = 362
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 63/125 (50%), Gaps = 18/125 (14%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASN--------GAPGQGPQSEGD 52
+ E+ G++ S +A P + +QY+ Y+++ + S D
Sbjct: 198 LVELQGIHLSQ------SALPLTILQFTKQYTLSHSYSNSPSPLLFSSHSLSSSSSSLED 251
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVG 112
+NTT+F+GGL VT+ +LR F +GEI VKIP GKGCGFVQ+ +AI
Sbjct: 252 PTNTTVFIGGLSSLVTENELRSLFQPFGEIVYVKIPFGKGCGFVQYETRKAAELAI---- 307
Query: 113 HTMEG 117
H M+G
Sbjct: 308 HKMKG 312
>gi|256269427|gb|EEU04722.1| Nam8p [Saccharomyces cerevisiae JAY291]
Length = 523
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 42/60 (70%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
D +NTT+F+GGL VT+++LR F +G I VKIPVGKGCGFVQ+ + L AI G+
Sbjct: 309 DPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGCGFVQYVDRLSAEAAIAGM 368
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 11/74 (14%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANSLGQIM 106
+N +IFVG L PNVT+ L + F ++Y + KI + KG GFV+F NS Q +
Sbjct: 161 NNCSIFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQL 220
Query: 107 AINGVGHTMEGKFM 120
A++ M+G F+
Sbjct: 221 ALS----EMQGVFL 230
>gi|323304584|gb|EGA58347.1| Nam8p [Saccharomyces cerevisiae FostersB]
Length = 523
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 42/60 (70%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
D +NTT+F+GGL VT+++LR F +G I VKIPVGKGCGFVQ+ + L AI G+
Sbjct: 309 DPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGCGFVQYVDRLSAEAAIAGM 368
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 11/74 (14%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANSLGQIM 106
+N +IFVG L PNVT+ L + F ++Y + KI + KG GFV+F NS Q +
Sbjct: 161 NNCSIFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQL 220
Query: 107 AINGVGHTMEGKFM 120
A++ M+G F+
Sbjct: 221 ALS----EMQGVFL 230
>gi|365765198|gb|EHN06710.1| Nam8p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 523
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 42/60 (70%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
D +NTT+F+GGL VT+++LR F +G I VKIPVGKGCGFVQ+ + L AI G+
Sbjct: 309 DPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGCGFVQYVDRLSAEAAIAGM 368
Score = 42.4 bits (98), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 11/74 (14%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANSLGQIM 106
+N +IFVG L PNVT+ L + F ++Y + KI + KG GFV+F NS Q +
Sbjct: 161 NNCSIFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQL 220
Query: 107 AINGVGHTMEGKFM 120
A++ M+G F+
Sbjct: 221 ALS----EMQGVFL 230
>gi|323308830|gb|EGA62067.1| Nam8p [Saccharomyces cerevisiae FostersO]
Length = 466
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 42/60 (70%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
D +NTT+F+GGL VT+++LR F +G I VKIPVGKGCGFVQ+ + L AI G+
Sbjct: 252 DPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGCGFVQYVDRLSAEAAIAGM 311
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 11/74 (14%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANSLGQIM 106
+N +IFVG L PNVT+ L + F ++Y + KI + KG GFV+F NS Q +
Sbjct: 104 NNCSIFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQL 163
Query: 107 AINGVGHTMEGKFM 120
A++ M+G F+
Sbjct: 164 ALS----EMQGVFL 173
>gi|365760349|gb|EHN02076.1| Nam8p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 513
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 42/60 (70%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
D +NTT+F+GGL VT+++LR F +G I VKIPVGKGCGFVQ+ + L AI G+
Sbjct: 301 DPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGCGFVQYVDRLSAEAAIAGM 360
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 11/71 (15%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANSLGQIMAIN 109
+IFVG L PNVT+ L F ++Y + KI + KG GFV+F N+ + +A++
Sbjct: 153 SIFVGDLAPNVTESQLFGLFINRYASASHAKIVHDQVTGMSKGYGFVKFTNAGEEQLALS 212
Query: 110 GVGHTMEGKFM 120
M+G F+
Sbjct: 213 ----EMQGVFL 219
>gi|320584167|gb|EFW98378.1| RNA-binding post-transcriptional regulator csx1 [Ogataea
parapolymorpha DL-1]
Length = 485
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 62/119 (52%), Gaps = 11/119 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGA----------PGQGP-QS 49
+ EM G RP+R+ A+ +++ + + +G P P Q
Sbjct: 213 LIEMQGYVLLGRPIRVSTASKSQTNAAANSSFASAMPSQDGLGQLKVNVPSLPQTAPLQY 272
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
D +NTT+F+GGL+ +++ LR FS+YG+I+ VKIP GK CGFVQF + MAI
Sbjct: 273 YNDPNNTTVFIGGLNVPISEMQLRALFSRYGDISYVKIPPGKNCGFVQFFHRASAEMAI 331
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 39 SNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------K 91
S+GA Q +G S +IFVG L VT++ L Q F ++Y + K+ + K
Sbjct: 138 SSGANATAFQPKGQSE-YSIFVGDLPQTVTEQSLLQAFQARYPSCSGAKVMIDPATGHLK 196
Query: 92 GCGFVQFANSLGQIMA-INGVGHTMEGKFMMV 122
G GFV+F N Q A I G+ + G+ + V
Sbjct: 197 GYGFVKFLNETDQKRALIEMQGYVLLGRPIRV 228
>gi|328769877|gb|EGF79920.1| hypothetical protein BATDEDRAFT_19794 [Batrachochytrium
dendrobatidis JAM81]
Length = 470
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 67/141 (47%), Gaps = 25/141 (17%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSS---------GYQ----QQYSSQGGYASNGA----- 42
+ ++ G SRP+R+ ATP+ + GY + G N A
Sbjct: 163 LVDLQGQMIGSRPVRVSIATPKHKALGSNGHGMPGYYPIPPSYMDASGAMIPNSAHMIYR 222
Query: 43 -PGQGPQSEG--DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
P Q G D +N+TIF+G L +T++DLR+ F +GEI KIP GK CGFVQF
Sbjct: 223 QPVYMHQHLGGNDPTNSTIFIGALPATMTNDDLRKHFLPFGEIVYTKIPFGKRCGFVQFI 282
Query: 100 NSLGQIMAINGVGHTMEGKFM 120
+ MAI M+GK +
Sbjct: 283 HRQSAEMAIQ----EMDGKVI 299
>gi|320165313|gb|EFW42212.1| nucleic acid binding protein [Capsaspora owczarzaki ATCC 30864]
Length = 1042
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 3/62 (4%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA---NSLGQIMAI 108
DS NTT++VGGL P+V+ E+L+ FS +G+I V+IP GK CGFVQFA N+ I +
Sbjct: 580 DSINTTVYVGGLSPHVSAEELKAIFSLFGDIVGVRIPQGKACGFVQFAQHGNAEQAIAHL 639
Query: 109 NG 110
NG
Sbjct: 640 NG 641
>gi|50311447|ref|XP_455748.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644884|emb|CAG98456.1| KLLA0F14861p [Kluyveromyces lactis]
Length = 589
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 41/57 (71%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
D +NTT+F+GGL +T+++LR F +G+I VKIPVGKGCGFVQ+ + + AI
Sbjct: 312 DPNNTTVFIGGLSTLITEDELRSYFQPFGQIVYVKIPVGKGCGFVQYVDRISAETAI 368
Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 11/74 (14%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANSLGQIM 106
S T+FVG L PNVT+ L + F S+Y + KI V KG GFV+F N + Q
Sbjct: 148 SEFTLFVGDLAPNVTEAQLFELFISRYSSTLNAKIVFDQFTGVSKGYGFVKFVNEMEQQR 207
Query: 107 AINGVGHTMEGKFM 120
A+ M+G F+
Sbjct: 208 AL----VEMQGTFL 217
>gi|363755816|ref|XP_003648124.1| hypothetical protein Ecym_8010 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891324|gb|AET41307.1| Hypothetical protein Ecym_8010 [Eremothecium cymbalariae
DBVPG#7215]
Length = 602
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 38/49 (77%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
D +NTT+F+GGL VT+E+LR F +G+I VKIPVGKGCGFVQ+ +
Sbjct: 282 DPNNTTVFIGGLSSLVTEEELRAYFQPFGQIVYVKIPVGKGCGFVQYVD 330
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 11/71 (15%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANSLGQIMAIN 109
+IFVG L PNV++ L + F S+Y + KI V KG GFV+F N Q ++
Sbjct: 143 SIFVGDLAPNVSESQLFELFISRYSSTLNAKIVFDQVTGVSKGYGFVKFGNEAEQQRSL- 201
Query: 110 GVGHTMEGKFM 120
M+G F+
Sbjct: 202 ---VEMQGVFL 209
>gi|410079368|ref|XP_003957265.1| hypothetical protein KAFR_0D04830 [Kazachstania africana CBS 2517]
gi|372463850|emb|CCF58130.1| hypothetical protein KAFR_0D04830 [Kazachstania africana CBS 2517]
Length = 406
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 41/57 (71%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
D +NTT+FVGGL VT+++LR+ F +G I VKIPVGKGCGFVQ+ + + AI
Sbjct: 240 DPNNTTVFVGGLSSLVTEDELREYFKPFGTIVYVKIPVGKGCGFVQYIDRVSAENAI 296
>gi|323450795|gb|EGB06674.1| hypothetical protein AURANDRAFT_28594, partial [Aureococcus
anophagefferens]
Length = 319
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 59/109 (54%), Gaps = 1/109 (0%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
M EM+G Y R +R AT R+ + + + Q + + P++ + NT +FV
Sbjct: 195 MNEMHGQYVGERAIRCTLATTREEREREAKMNQQQ-QMYDPSRLHAPKATEEGENTCVFV 253
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAIN 109
GGLD +V+ + LR F G+IA ++IP G+GCGFV F + AI+
Sbjct: 254 GGLDESVSPDMLRHHFGLLGDIAYIRIPPGRGCGFVGFVHRKNAEAAIS 302
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 10/71 (14%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQF 98
GP + D S IFVG LD VT++ L F+ +Y I S K+ + KG GF++F
Sbjct: 129 GPPPQADWS---IFVGDLDYTVTEQQLHGAFAKKYRSILSTKLVIDMSTGLSKGFGFIKF 185
Query: 99 ANSLGQIMAIN 109
+ + A+N
Sbjct: 186 GSEAERDSAMN 196
>gi|410081644|ref|XP_003958401.1| hypothetical protein KAFR_0G02320 [Kazachstania africana CBS 2517]
gi|372464989|emb|CCF59266.1| hypothetical protein KAFR_0G02320 [Kazachstania africana CBS 2517]
Length = 620
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 29/139 (20%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ-------------------------- 34
+ +MNG R +R+ A PR ++ Q+Q SQ
Sbjct: 240 LDKMNGTLLHGRQLRVALANPR-NANLQEQAPSQVVEDKKKHNEPLLLETAKKLFSKELL 298
Query: 35 --GGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG 92
N S+ D +NTT+FVG L+ +T+++L++ F +G I VKIP GK
Sbjct: 299 KNSSSNVNDVKSNEDHSDNDPTNTTVFVGNLNCKITEDELQKVFEPFGAIEKVKIPPGKK 358
Query: 93 CGFVQFANSLGQIMAINGV 111
CGFV+F N + ++ G+
Sbjct: 359 CGFVKFCNKIDAEASMYGL 377
>gi|50292159|ref|XP_448512.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527824|emb|CAG61473.1| unnamed protein product [Candida glabrata]
Length = 802
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 41/60 (68%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
D +NTT+FVGGL P V ++ LR+ F +G I S+KIP GK CGFV+F + + AI G+
Sbjct: 463 DPTNTTVFVGGLGPTVQEQQLRKIFQPFGNILSIKIPPGKNCGFVKFEHKIDAEAAIQGL 522
>gi|393229322|gb|EJD36947.1| hypothetical protein AURDEDRAFT_188233 [Auricularia delicata
TFB-10046 SS5]
Length = 893
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 39/60 (65%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
+ D NTT+FVGGL P V +E LR F+ +GEI VK+PVGK CGFVQF + AI
Sbjct: 401 TSADPYNTTVFVGGLSPLVPEETLRTFFAPFGEIHYVKVPVGKHCGFVQFVHKADAERAI 460
>gi|50288915|ref|XP_446887.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526196|emb|CAG59820.1| unnamed protein product [Candida glabrata]
Length = 555
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 57/121 (47%), Gaps = 23/121 (19%)
Query: 1 MTEMNGVYCSSRPMRIGAA------------------TPRKSSGYQQQYSSQGGYASNGA 42
+ EM G + + R ++IG A S+G QQ S G
Sbjct: 249 LVEMQGCFLNGRAIKIGIAGGNNNNNSNSNYNNQRMANDNISNGLGQQSRSLNGQLPQQF 308
Query: 43 PGQGPQSE-----GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQ 97
PQ D +NTT+FVGGL P VT+++LR F +G I VKIP GKGCGFVQ
Sbjct: 309 VNATPQQPVLNHFTDPNNTTVFVGGLSPLVTEDELRSYFEPFGTIIYVKIPAGKGCGFVQ 368
Query: 98 F 98
+
Sbjct: 369 Y 369
Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 7/62 (11%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI------PVGKGCGFVQFANSLGQIM 106
+N +IFVG L P+VT+ L F ++Y K+ + KG GFV+F +S+ Q
Sbjct: 188 TNNSIFVGDLAPSVTEAQLFDLFINKYPSTVHAKVMYDQLTGISKGYGFVKFKSSMDQQR 247
Query: 107 AI 108
A+
Sbjct: 248 AL 249
>gi|365987806|ref|XP_003670734.1| hypothetical protein NDAI_0F01720 [Naumovozyma dairenensis CBS 421]
gi|343769505|emb|CCD25491.1| hypothetical protein NDAI_0F01720 [Naumovozyma dairenensis CBS 421]
Length = 474
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/77 (46%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 35 GGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG 94
G SNG QG S +S N+TIFVGGL +V++++L + F +GEI VKIP+GK CG
Sbjct: 289 GNLRSNGNIRQGLGS--NSKNSTIFVGGLSTDVSEQELNELFRPFGEIMDVKIPLGKKCG 346
Query: 95 FVQFANSLGQIMAINGV 111
FV F + AI G+
Sbjct: 347 FVTFKRRIDAKAAIKGL 363
>gi|389747119|gb|EIM88298.1| hypothetical protein STEHIDRAFT_95374 [Stereum hirsutum FP-91666
SS1]
Length = 932
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 38/57 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
D NTT+FVGGL P +++E LR F+ +GEI VK+PVGK CGFVQF AI
Sbjct: 561 DPYNTTVFVGGLSPLISEETLRTFFAPFGEIHYVKVPVGKHCGFVQFVRKADAERAI 617
>gi|336373915|gb|EGO02253.1| hypothetical protein SERLA73DRAFT_86524 [Serpula lacrymans var.
lacrymans S7.3]
Length = 611
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 64/144 (44%), Gaps = 40/144 (27%)
Query: 1 MTEMNGVYCSSRP-----------MRIGAATPRKSSGYQQQYSSQGGYASNGAPGQ---- 45
+ EM+G+YC SRP +++G T + + G NGAP
Sbjct: 172 LIEMHGLYCLSRPTAQQYSSTNAAIKVGGVTTNPAGAT----FAPDGQDQNGAPRYMISE 227
Query: 46 -----------------GPQSE----GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIAS 84
GP E D NTT+FVGGL P +++E LR F+ +G+I
Sbjct: 228 ESWKHHAQARAILGNLIGPNGEQLTSTDPYNTTVFVGGLSPLISEETLRTFFAPFGDIHY 287
Query: 85 VKIPVGKGCGFVQFANSLGQIMAI 108
VK+PVGK CGFVQF AI
Sbjct: 288 VKVPVGKHCGFVQFVRKADAERAI 311
>gi|323337302|gb|EGA78555.1| Nam8p [Saccharomyces cerevisiae Vin13]
Length = 523
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
D +NTT+F+GGL VT+++LR F +G I VKIPVGK CGFVQ+ + L AI G+
Sbjct: 309 DPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKXCGFVQYVDRLSAEAAIAGM 368
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 11/74 (14%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANSLGQIM 106
+N +IFVG L PNVT+ L + F ++Y + KI + KG GFV+F NS Q +
Sbjct: 161 NNCSIFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQL 220
Query: 107 AINGVGHTMEGKFM 120
A++ M+G F+
Sbjct: 221 ALS----EMQGVFL 230
>gi|409050510|gb|EKM59987.1| hypothetical protein PHACADRAFT_250820 [Phanerochaete carnosa
HHB-10118-sp]
Length = 643
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 38/57 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
D NTT+FVGGL P +++E LR F+ +GEI VK+PVGK CGFVQF AI
Sbjct: 305 DPYNTTVFVGGLSPLISEETLRTFFAPFGEIHYVKVPVGKHCGFVQFVRKPDAERAI 361
>gi|255714705|ref|XP_002553634.1| KLTH0E03520p [Lachancea thermotolerans]
gi|238935016|emb|CAR23197.1| KLTH0E03520p [Lachancea thermotolerans CBS 6340]
Length = 516
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 40/57 (70%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
D +NTT+F+GGL V++++LR F +G I VKIPVGKGCGFVQ+ + + AI
Sbjct: 269 DPNNTTVFIGGLSSLVSEDELRAYFQPFGSIVYVKIPVGKGCGFVQYVDRISAETAI 325
>gi|374107618|gb|AEY96526.1| FADR307Wp [Ashbya gossypii FDAG1]
Length = 565
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 38/50 (76%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
D +NTT+F+GGL VT+++LR F +G+I VKIPVGKGCGFVQ+ +
Sbjct: 277 ADPNNTTVFIGGLSSLVTEDELRAYFQPFGQIVYVKIPVGKGCGFVQYVD 326
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 11/74 (14%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANSLGQIM 106
S +IFVG L PNVT+ L + F S+Y + KI V KG GFV+F N Q
Sbjct: 139 SEFSIFVGDLAPNVTESQLFELFISRYSSTLNAKIVFDQGTGVSKGYGFVKFGNEAEQQR 198
Query: 107 AINGVGHTMEGKFM 120
++ M+G F+
Sbjct: 199 SL----LEMQGVFL 208
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 40/66 (60%), Gaps = 9/66 (13%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK--------GCGFVQFANSL 102
D+S+T +++G LDP+ T+ D++Q ++ GE A+V++ + K G FV+F ++L
Sbjct: 47 ADTSSTQLYMGDLDPSWTEGDIKQIWATLGE-ANVQVKLIKNSSGGGNSGYCFVEFPSNL 105
Query: 103 GQIMAI 108
A+
Sbjct: 106 AATNAL 111
>gi|302307679|ref|NP_984403.2| ADR307Wp [Ashbya gossypii ATCC 10895]
gi|299789115|gb|AAS52227.2| ADR307Wp [Ashbya gossypii ATCC 10895]
Length = 566
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 38/50 (76%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
D +NTT+F+GGL VT+++LR F +G+I VKIPVGKGCGFVQ+ +
Sbjct: 277 ADPNNTTVFIGGLSSLVTEDELRAYFQPFGQIVYVKIPVGKGCGFVQYVD 326
Score = 38.5 bits (88), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 11/74 (14%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANSLGQIM 106
S +IFVG L PNVT+ L + F S+Y + KI V KG GFV+F N Q
Sbjct: 139 SEFSIFVGDLAPNVTESQLFELFISRYSSTLNAKIVFDQGTGVSKGYGFVKFGNEAEQQR 198
Query: 107 AINGVGHTMEGKFM 120
++ M+G F+
Sbjct: 199 SL----LEMQGVFL 208
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 40/66 (60%), Gaps = 9/66 (13%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK--------GCGFVQFANSL 102
D+S+T +++G LDP+ T+ D++Q ++ GE A+V++ + K G FV+F ++L
Sbjct: 47 ADTSSTQLYMGDLDPSWTEGDIKQIWATLGE-ANVQVKLIKNSSGGGNSGYCFVEFPSNL 105
Query: 103 GQIMAI 108
A+
Sbjct: 106 AATNAL 111
>gi|365984507|ref|XP_003669086.1| hypothetical protein NDAI_0C01820 [Naumovozyma dairenensis CBS 421]
gi|343767854|emb|CCD23843.1| hypothetical protein NDAI_0C01820 [Naumovozyma dairenensis CBS 421]
Length = 498
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 39/57 (68%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
D +NTT+FVGGL VT+E LR F +G I VKIP+GKGCGFVQ+ + + AI
Sbjct: 322 DPNNTTVFVGGLSSMVTEEQLRHCFQPFGTIIYVKIPIGKGCGFVQYFDRISAETAI 378
>gi|4026|emb|CAA46011.1| NAM8 [Saccharomyces cerevisiae]
gi|228931|prf||1814447B NAM8 gene
Length = 523
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
D +NTT+F+GGL VT+++LR F +G I VKIPVGK CGFVQ+ + L AI G+
Sbjct: 309 DPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKCCGFVQYVDRLSAEAAIAGM 368
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 11/74 (14%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANSLGQIM 106
+N +IFVG L PNVT+ L + F ++Y + KI + KG V+F NS Q +
Sbjct: 161 NNCSIFVGDLAPNVTESQLLELFINRYASTSHAKIVHDQVTGMSKGYVLVKFTNSDEQQL 220
Query: 107 AINGVGHTMEGKFM 120
A++ M+G F+
Sbjct: 221 ALS----EMQGVFL 230
>gi|6321878|ref|NP_011954.1| Nam8p [Saccharomyces cerevisiae S288c]
gi|730108|sp|Q00539.2|NAM8_YEAST RecName: Full=Protein NAM8
gi|487934|gb|AAB68928.1| Nam8p: Putative RNA binding proteins [Saccharomyces cerevisiae]
gi|520596|dbj|BAA02016.1| Mre2 protein [Saccharomyces cerevisiae]
gi|190405867|gb|EDV09134.1| RNA-binding protein [Saccharomyces cerevisiae RM11-1a]
gi|207344656|gb|EDZ71726.1| YHR086Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|285809994|tpg|DAA06781.1| TPA: Nam8p [Saccharomyces cerevisiae S288c]
gi|323333247|gb|EGA74645.1| Nam8p [Saccharomyces cerevisiae AWRI796]
Length = 523
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
D +NTT+F+GGL VT+++LR F +G I VKIPVGK CGFVQ+ + L AI G+
Sbjct: 309 DPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKCCGFVQYVDRLSAEAAIAGM 368
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 11/74 (14%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANSLGQIM 106
+N +IFVG L PNVT+ L + F ++Y + KI + KG GFV+F NS Q +
Sbjct: 161 NNCSIFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQL 220
Query: 107 AINGVGHTMEGKFM 120
A++ M+G F+
Sbjct: 221 ALS----EMQGVFL 230
>gi|363750388|ref|XP_003645411.1| hypothetical protein Ecym_3082 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889045|gb|AET38594.1| Hypothetical protein Ecym_3082 [Eremothecium cymbalariae
DBVPG#7215]
Length = 586
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 41/60 (68%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
D SNTT+F+GGL+ +T+ L+ F +G I SVK+P GKGCGFV+F + L AI G+
Sbjct: 394 DPSNTTVFIGGLNNQITESQLQSLFMPFGNILSVKVPPGKGCGFVKFEHRLDAEAAIQGM 453
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQG 35
+ EMNG++C R +R+ ATPR + QQQ G
Sbjct: 222 LVEMNGIWCQGRQLRVAYATPRNNILQQQQIPVPG 256
>gi|299748443|ref|XP_001839126.2| RNA-binding protein Csx1 [Coprinopsis cinerea okayama7#130]
gi|298407975|gb|EAU82695.2| RNA-binding protein Csx1 [Coprinopsis cinerea okayama7#130]
Length = 808
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 38/57 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
D NTT+FVGGL P +++E LR F+ +G+I VK+PVGK CGFVQF AI
Sbjct: 492 DPYNTTVFVGGLSPLISEETLRTFFAPFGDIHYVKVPVGKHCGFVQFVRKADAERAI 548
>gi|42571787|ref|NP_973984.1| RNA-binding protein 47C [Arabidopsis thaliana]
gi|332194052|gb|AEE32173.1| RNA-binding protein 47C [Arabidopsis thaliana]
Length = 310
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 41/60 (68%), Gaps = 7/60 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGV CSSR MRIG ATPRK++GYQQ QGGY NG + EGD NTT+ V
Sbjct: 256 MTEMNGVKCSSRAMRIGPATPRKTNGYQQ----QGGYMPNGTLT---RPEGDIMNTTVIV 308
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 10/72 (13%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFVQFANSL 102
E + + +IFVG L P+V+D L + FS+ Y + + K+ + KG GFV+F +
Sbjct: 191 ENNGPDLSIFVGDLSPDVSDNLLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDEN 250
Query: 103 GQIMA---INGV 111
+ A +NGV
Sbjct: 251 ERTKAMTEMNGV 262
>gi|406602666|emb|CCH45778.1| Nucleolysin TIA-1 isoform [Wickerhamomyces ciferrii]
Length = 485
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 40/57 (70%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
D +NTT+F+GGL VT+++LR F +G+I VKIPVGKGCGFVQ+ +AI
Sbjct: 290 DPNNTTVFIGGLSSIVTEDELRLYFQPFGDITYVKIPVGKGCGFVQYVTRSSAELAI 346
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 7/64 (10%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANSLGQ 104
+ + +IFVG L P+V+D L + F S+Y ++ KI + KG GFV+F N L Q
Sbjct: 143 NRNEVSIFVGDLAPDVSDTILYEYFGSKYPSVSGTKIMIDSLTGGSKGYGFVRFINELEQ 202
Query: 105 IMAI 108
A+
Sbjct: 203 KRAL 206
>gi|2130979|dbj|BAA11919.1| csx1+ [Schizosaccharomyces pombe]
Length = 125
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 39 SNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF 98
SN P Q S D NTT+FVGGL N++++DL+ F +G I ++KIP GKGCGFVQ+
Sbjct: 13 SNRQPNQDLCSM-DPLNTTVFVGGLASNLSEKDLQVCFQPFGRILNIKIPFGKGCGFVQY 71
Query: 99 ANSLGQIMAINGVGHTMEGKFM 120
+ AIN TM+G +
Sbjct: 72 SEKSAAEKAIN----TMQGALV 89
>gi|392586871|gb|EIW76206.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 876
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 38/57 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
D NTT+FVGGL P +++E LR F+ +G+I VK+P+GK CGFVQF AI
Sbjct: 574 DPYNTTVFVGGLSPLISEETLRTFFAPFGDIHYVKVPIGKHCGFVQFVRKADAERAI 630
>gi|254577373|ref|XP_002494673.1| ZYRO0A07018p [Zygosaccharomyces rouxii]
gi|238937562|emb|CAR25740.1| ZYRO0A07018p [Zygosaccharomyces rouxii]
Length = 558
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 39/57 (68%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
D +NTT+FVGGL V +++LR F +G I VKIPVGKGCGFVQ+ + + AI
Sbjct: 279 DPNNTTVFVGGLSSLVAEDELRAYFQPFGTIVYVKIPVGKGCGFVQYVDRISAETAI 335
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 11/71 (15%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANSLGQIMAIN 109
++FVG L PNVT+ L + F S++ + VKI V KG FV+F N Q A+
Sbjct: 146 SVFVGDLAPNVTESQLFELFISRFNSTSHVKIVYDQLTGVSKGYAFVKFTNPAHQQRAL- 204
Query: 110 GVGHTMEGKFM 120
M+G F+
Sbjct: 205 ---LEMQGIFL 212
>gi|403416664|emb|CCM03364.1| predicted protein [Fibroporia radiculosa]
Length = 948
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 39/60 (65%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
+ D NTT+FVGGL P +++E LR F+ +G+I VK+PVGK CGFVQF AI
Sbjct: 607 TSSDPYNTTVFVGGLSPLISEETLRTFFAPFGDIHYVKVPVGKHCGFVQFVRKPDAERAI 666
>gi|336386826|gb|EGO27972.1| hypothetical protein SERLADRAFT_414166 [Serpula lacrymans var.
lacrymans S7.9]
Length = 933
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 38/57 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
D NTT+FVGGL P +++E LR F+ +G+I VK+PVGK CGFVQF AI
Sbjct: 577 DPYNTTVFVGGLSPLISEETLRTFFAPFGDIHYVKVPVGKHCGFVQFVRKADAERAI 633
>gi|392568189|gb|EIW61363.1| hypothetical protein TRAVEDRAFT_26986 [Trametes versicolor
FP-101664 SS1]
Length = 950
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 38/60 (63%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
+ D NTT+FVGGL P + ++ LR F+ +GEI VK+PVGK CGFVQF AI
Sbjct: 613 TSSDPYNTTVFVGGLSPLINEDTLRTFFAPFGEIHYVKVPVGKHCGFVQFVRKPDAERAI 672
>gi|395329881|gb|EJF62266.1| hypothetical protein DICSQDRAFT_135856 [Dichomitus squalens
LYAD-421 SS1]
Length = 973
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 39/60 (65%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
+ D NTT+FVGGL P ++++ LR F+ +GEI VK+PVGK CGFVQF AI
Sbjct: 621 TSSDPYNTTVFVGGLSPLISEDTLRTFFAPFGEIHYVKVPVGKHCGFVQFVRKPDAERAI 680
>gi|388851881|emb|CCF54475.1| related to NAM8-meiotic recombination protein [Ustilago hordei]
Length = 926
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
S D +NTT+FVGGL ++++ LR+ F +GEI VKIP GKGCGFVQ+ AI
Sbjct: 588 SAADPNNTTVFVGGLSSLISEQTLRRYFEHFGEITYVKIPPGKGCGFVQYVRKQDAENAI 647
Query: 109 NGVGHTMEG 117
H M G
Sbjct: 648 ----HRMNG 652
>gi|71005504|ref|XP_757418.1| hypothetical protein UM01271.1 [Ustilago maydis 521]
gi|46096901|gb|EAK82134.1| hypothetical protein UM01271.1 [Ustilago maydis 521]
Length = 1059
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 45/75 (60%), Gaps = 5/75 (6%)
Query: 34 QGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
QGG +SN S D +NTT+FVGGL +++ LR+ F +GEI+ VKIP GKGC
Sbjct: 604 QGGSSSNPN-----DSAADPNNTTVFVGGLSSLISEVTLRRYFEHFGEISYVKIPPGKGC 658
Query: 94 GFVQFANSLGQIMAI 108
GFVQ+ AI
Sbjct: 659 GFVQYVRKQDAETAI 673
>gi|390601667|gb|EIN11061.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 877
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 38/57 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
D NTT+FVGGL P ++++ LR F+ +G+I VK+PVGK CGFVQF AI
Sbjct: 533 DPYNTTVFVGGLSPLISEDTLRTFFAPFGDIHYVKVPVGKHCGFVQFVRKADAERAI 589
>gi|367002926|ref|XP_003686197.1| hypothetical protein TPHA_0F02820 [Tetrapisispora phaffii CBS 4417]
gi|357524497|emb|CCE63763.1| hypothetical protein TPHA_0F02820 [Tetrapisispora phaffii CBS 4417]
Length = 608
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 47/156 (30%), Positives = 67/156 (42%), Gaps = 45/156 (28%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRK---------------------------SSGYQQQYSS 33
+ MNGV C SR R+ ATPR +S Y+Q ++
Sbjct: 242 LENMNGVMCHSRYFRLALATPRTNKFATSTNMTQVREDNDGRSNSVTNVHTSPYEQTTTN 301
Query: 34 QGGY--------------ASNGAPGQGPQS----EGDSSNTTIFVGGLDPNVTDEDLRQP 75
SN + Q Q+ D+SNTT+F+GGL + + +L+
Sbjct: 302 INISNKFIDKLDVNNFIPTSNNSLQQSAQNIDHVNLDNSNTTVFIGGLSTSTNEYELQVL 361
Query: 76 FSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
F +G I SVKIP+GK CGFV+F + AI G+
Sbjct: 362 FEPFGNILSVKIPIGKNCGFVKFKRKIEANAAIKGM 397
>gi|238600700|ref|XP_002395212.1| hypothetical protein MPER_04772 [Moniliophthora perniciosa FA553]
gi|215465560|gb|EEB96142.1| hypothetical protein MPER_04772 [Moniliophthora perniciosa FA553]
Length = 200
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 37/57 (64%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
D NTT+FVGGL P + ++ LR F+ +G+I VK+PVGK CGFVQF AI
Sbjct: 113 DPYNTTVFVGGLSPLINEDTLRTFFAPFGDIHYVKVPVGKNCGFVQFVRKADAERAI 169
>gi|353238970|emb|CCA70899.1| related to polyadenylate-binding protein [Piriformospora indica DSM
11827]
Length = 944
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 39/68 (57%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLG 103
G P D NTT+FVGGL P +++E LR F+ +G I VK+P GK CGFVQF
Sbjct: 390 GNDPLVPSDPQNTTVFVGGLSPLISEETLRTFFAPFGAIHYVKVPPGKSCGFVQFVKKSD 449
Query: 104 QIMAINGV 111
AI +
Sbjct: 450 AERAIEAL 457
>gi|302696241|ref|XP_003037799.1| hypothetical protein SCHCODRAFT_83732 [Schizophyllum commune H4-8]
gi|300111496|gb|EFJ02897.1| hypothetical protein SCHCODRAFT_83732 [Schizophyllum commune H4-8]
Length = 759
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 38/57 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
D NTT+FVGGL P ++++ LR F+ +G+I VK+PVGK CGFVQF AI
Sbjct: 542 DPYNTTVFVGGLSPLISEDTLRTFFAPFGDIHYVKVPVGKHCGFVQFVRKADAENAI 598
>gi|308801969|ref|XP_003078298.1| DNA-binding protein (ISS) [Ostreococcus tauri]
gi|116056749|emb|CAL53038.1| DNA-binding protein (ISS) [Ostreococcus tauri]
Length = 452
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
D NTTIF+G LD NVT+E LR F ++GEIA K KGCGFV F + AI +
Sbjct: 296 DPQNTTIFIGNLDHNVTEEHLRVVFEEFGEIAYAKATPKKGCGFVHFFDRQDATEAIENL 355
Query: 112 GHTMEGKFMMVMGMLFRHQMTQ---ACTLQQLRP 142
+M G + + RH T+ A QQ P
Sbjct: 356 HGSMIGSKRVRLS-WGRHNATKCAIASMYQQQYP 388
>gi|443897314|dbj|GAC74655.1| FOG: RRM domain [Pseudozyma antarctica T-34]
Length = 979
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 36/50 (72%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF 98
S D +NTT+FVGGL +++ LR+ F +GEI VKIP GKGCGFVQ+
Sbjct: 577 SAADPNNTTVFVGGLSSLISESTLRRYFEHFGEITYVKIPPGKGCGFVQY 626
>gi|254579785|ref|XP_002495878.1| ZYRO0C05060p [Zygosaccharomyces rouxii]
gi|238938769|emb|CAR26945.1| ZYRO0C05060p [Zygosaccharomyces rouxii]
Length = 716
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 39/60 (65%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
D +NTT+F+GGL P + + L+ FS +G I +VKIP GK CGFV+F + AI G+
Sbjct: 417 DPNNTTVFIGGLTPKINENQLQTLFSPFGNILTVKIPQGKNCGFVKFEKRIDAEAAIQGM 476
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQ 30
+ EMNGV+C R +R+ ATPR + +Q Q
Sbjct: 281 LVEMNGVWCQGRCLRVAYATPRNNMMWQVQ 310
>gi|343427154|emb|CBQ70682.1| related to NAM8-meiotic recombination protein [Sporisorium
reilianum SRZ2]
Length = 968
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 36/50 (72%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF 98
S D +NTT+FVGGL +++ LR+ F +GEI VKIP GKGCGFVQ+
Sbjct: 572 SAADPNNTTVFVGGLSSLISEATLRRYFEHFGEITYVKIPPGKGCGFVQY 621
>gi|358056882|dbj|GAA97232.1| hypothetical protein E5Q_03908 [Mixia osmundae IAM 14324]
Length = 683
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 37/57 (64%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
D +NTT+FVGGL +++E LR F +G+I VKIP KGCGFVQF +AI
Sbjct: 381 DPNNTTVFVGGLPACISEETLRNFFQHFGDITYVKIPPNKGCGFVQFVRRQDAELAI 437
>gi|443926790|gb|ELU45354.1| RNA recognition motif domain-containing protein [Rhizoctonia solani
AG-1 IA]
Length = 886
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 36/59 (61%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAIN 109
D NTT+FVGGL + +E LR F+ +GEI VKIP GKGCGFVQF AI
Sbjct: 499 ADPYNTTVFVGGLSGLIAEETLRGFFAPFGEIHYVKIPPGKGCGFVQFVRKADAERAIE 557
>gi|393216132|gb|EJD01623.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 937
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 37/57 (64%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
D NTT+FVGGL P ++++ LR F+ +G+I VK+P GK CGFVQF AI
Sbjct: 575 DPYNTTVFVGGLSPLISEDTLRTFFAPFGDIHYVKVPAGKHCGFVQFVRKADAERAI 631
>gi|50304975|ref|XP_452445.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641578|emb|CAH01296.1| KLLA0C05522p [Kluyveromyces lactis]
Length = 540
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 39/58 (67%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
S+TT+FVGGL+PN+ + L + F +G I VKIP GK CGFV++ L AING+
Sbjct: 443 SSTTVFVGGLNPNINELQLFELFKPFGTITDVKIPPGKQCGFVKYNERLEAEAAINGL 500
>gi|385302315|gb|EIF46452.1| mrna binding post-transcriptional regulator [Dekkera bruxellensis
AWRI1499]
Length = 207
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 44 GQGPQSEG-DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSL 102
G P S G D +NTT+FVGG++ +V+++ LR F +G+I +V +P GKGCGFV+F
Sbjct: 51 GSAPYSGGQDPNNTTVFVGGINSSVSEDALRSLFDPFGDIVNVCVPPGKGCGFVRFTTHE 110
Query: 103 GQIMAIN 109
A+N
Sbjct: 111 SAQQAVN 117
>gi|449549395|gb|EMD40360.1| hypothetical protein CERSUDRAFT_110955 [Ceriporiopsis subvermispora
B]
Length = 709
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 37/57 (64%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
D NTT+FVGGL P ++++ LR F+ +G+I VK+P GK CGFVQF AI
Sbjct: 385 DPYNTTVFVGGLSPLISEDTLRTFFAPFGDIHYVKVPAGKHCGFVQFVRKPDAERAI 441
>gi|444322688|ref|XP_004181985.1| hypothetical protein TBLA_0H01790 [Tetrapisispora blattae CBS 6284]
gi|387515031|emb|CCH62466.1| hypothetical protein TBLA_0H01790 [Tetrapisispora blattae CBS 6284]
Length = 674
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 38/57 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
D +NTT+F+GGL V++ +LR F +G I VKIPVGKGCGFVQ+ + AI
Sbjct: 336 DPNNTTVFIGGLSSLVSEGELRSYFQPFGTIVYVKIPVGKGCGFVQYVDRSAAETAI 392
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 11/71 (15%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI------PVGKGCGFVQFANSLGQIMAIN 109
++FVG L PNVT+ L F ++Y KI V KG GFV+F NS Q ++N
Sbjct: 174 SVFVGDLAPNVTEAQLFDLFINRYSSTIHAKIVYDQMTNVSKGYGFVRFNNSADQQRSLN 233
Query: 110 GVGHTMEGKFM 120
M+G F+
Sbjct: 234 ----EMQGVFL 240
>gi|323338729|gb|EGA79945.1| Ngr1p [Saccharomyces cerevisiae Vin13]
Length = 594
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 38/60 (63%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
D +NTT+FVGGL P T+ LR F +G I +V+IP GK CGFV+F + +I G+
Sbjct: 356 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGL 415
>gi|367016893|ref|XP_003682945.1| hypothetical protein TDEL_0G03670 [Torulaspora delbrueckii]
gi|359750608|emb|CCE93734.1| hypothetical protein TDEL_0G03670 [Torulaspora delbrueckii]
Length = 617
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 39/58 (67%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
+NTT+F+GGL P + + L+ FS +G I +VKIP GK CGFV++ N + AI G+
Sbjct: 384 NNTTVFIGGLTPKINEAQLQALFSPFGNILTVKIPQGKNCGFVKYENRIDAEAAIQGM 441
>gi|323349799|gb|EGA84014.1| Ngr1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 593
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 38/60 (63%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
D +NTT+FVGGL P T+ LR F +G I +V+IP GK CGFV+F + +I G+
Sbjct: 355 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGL 414
>gi|190408636|gb|EDV11901.1| glucose-repressible RNA binding protein [Saccharomyces cerevisiae
RM11-1a]
gi|290878229|emb|CBK39288.1| Ngr1p [Saccharomyces cerevisiae EC1118]
Length = 670
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 38/60 (63%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
D +NTT+FVGGL P T+ LR F +G I +V+IP GK CGFV+F + +I G+
Sbjct: 356 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGL 415
>gi|4031|emb|CAA78478.1| Negative growth regulatory protein [Saccharomyces cerevisiae]
Length = 672
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 38/60 (63%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
D +NTT+FVGGL P T+ LR F +G I +V+IP GK CGFV+F + +I G+
Sbjct: 356 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGL 415
>gi|398365523|ref|NP_009771.3| Ngr1p [Saccharomyces cerevisiae S288c]
gi|585555|sp|P32831.2|NGR1_YEAST RecName: Full=Negative growth regulatory protein NGR1; AltName:
Full=RNA-binding protein RBP1
gi|536596|emb|CAA85176.1| NGR1 [Saccharomyces cerevisiae]
gi|285810543|tpg|DAA07328.1| TPA: Ngr1p [Saccharomyces cerevisiae S288c]
Length = 672
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 38/60 (63%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
D +NTT+FVGGL P T+ LR F +G I +V+IP GK CGFV+F + +I G+
Sbjct: 356 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGL 415
>gi|365766915|gb|EHN08404.1| Ngr1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 669
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 38/60 (63%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
D +NTT+FVGGL P T+ LR F +G I +V+IP GK CGFV+F + +I G+
Sbjct: 355 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGL 414
>gi|349576587|dbj|GAA21758.1| K7_Ngr1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 671
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 38/60 (63%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
D +NTT+FVGGL P T+ LR F +G I +V+IP GK CGFV+F + +I G+
Sbjct: 356 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGL 415
>gi|392301060|gb|EIW12149.1| Ngr1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 670
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 38/60 (63%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
D +NTT+FVGGL P T+ LR F +G I +V+IP GK CGFV+F + +I G+
Sbjct: 356 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGL 415
>gi|323356144|gb|EGA87949.1| Ngr1p [Saccharomyces cerevisiae VL3]
Length = 562
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 38/60 (63%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
D +NTT+FVGGL P T+ LR F +G I +V+IP GK CGFV+F + +I G+
Sbjct: 248 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGL 307
>gi|324507276|gb|ADY43089.1| RNA-binding motif, single-stranded-interacting protein 1 [Ascaris
suum]
Length = 673
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 47 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFAN 100
P S+ S+T +++ GLDPN TDEDLRQ QYG I S K + KG GFV F +
Sbjct: 291 PHSDAPLSSTNVYIRGLDPNTTDEDLRQKCDQYGVILSTKAIMDKATGQCKGYGFVDFES 350
Query: 101 SLGQIMAINGVGHTMEGKFMMVMGMLFRHQMTQACT 136
+ + A+ G+ EGK M + Q Q T
Sbjct: 351 AEAAMRAVEGLNQ--EGKVQAQMAKVSIAQQEQDPT 384
>gi|207347548|gb|EDZ73682.1| YBR212Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 617
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 38/60 (63%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
D +NTT+FVGGL P T+ LR F +G I +V+IP GK CGFV+F + +I G+
Sbjct: 356 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGL 415
>gi|256270156|gb|EEU05383.1| Ngr1p [Saccharomyces cerevisiae JAY291]
Length = 673
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 38/60 (63%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
D +NTT+FVGGL P T+ LR F +G I +V+IP GK CGFV+F + +I G+
Sbjct: 356 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGL 415
>gi|388580130|gb|EIM20447.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 681
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 36/57 (63%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
D NTT+FVGGL ++++ LR F+ +G I VKIP GKGCGFVQF AI
Sbjct: 308 DPHNTTVFVGGLSSLISEDTLRVFFAPFGAITYVKIPPGKGCGFVQFVRKADAERAI 364
>gi|151946599|gb|EDN64821.1| glucose-repressible RNA binding protein [Saccharomyces cerevisiae
YJM789]
Length = 670
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 37/60 (61%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
D +NTT+FVGGL P T+ LR F +G I +V IP GK CGFV+F + +I G+
Sbjct: 356 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVTIPNGKNCGFVKFEKRIDAEASIQGL 415
>gi|384245275|gb|EIE18770.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 351
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 8/121 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+++M+G SR +R G A +Q +SQ +A+ +++ D N ++V
Sbjct: 168 LSQMSGTMLGSRRIRCGWAQ-------HKQENSQASFAAVDRVSTLSRAQADPENANVYV 220
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV-GHTMEGKF 119
G L P+V+D +L+ SQ+G + VKI G F QFA+ + AI G+ G + GK
Sbjct: 221 GNLAPDVSDAELQTAVSQFGAVLDVKIYRKGGYAFAQFASHADAVRAIVGLSGQNLGGKA 280
Query: 120 M 120
+
Sbjct: 281 L 281
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 8/97 (8%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANSLGQ 104
GD++ ++VG L P VTD L++ FS G++ +KI K G GFVQF +
Sbjct: 18 GDAAKA-LYVGNLHPFVTDAMLQEIFSTLGQVGEIKIIKDKLTGLSAGYGFVQFLDHRAA 76
Query: 105 IMAINGV-GHTMEGKFMMVMGMLFRHQMTQACTLQQL 140
MA+ + G + G+ + V + Q + + Q+
Sbjct: 77 DMALQSLNGRVLHGQELRVNWAFQKDQREDSASQFQI 113
>gi|328858949|gb|EGG08060.1| hypothetical protein MELLADRAFT_31227 [Melampsora larici-populina
98AG31]
Length = 76
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 34/48 (70%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D SNTT+FVGGL +++E L+ F +GEI VKIP KGCGFVQ+
Sbjct: 1 DPSNTTVFVGGLPACISEETLKTFFQNFGEITYVKIPPNKGCGFVQYV 48
>gi|365761964|gb|EHN03583.1| Ngr1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 666
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 37/60 (61%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
D +NTT+FVGGL P + LR F +G I +V+IP GK CGFV+F + +I G+
Sbjct: 355 DPTNTTVFVGGLVPKTAEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGL 414
>gi|406603569|emb|CCH44882.1| Negative growth regulatory protein NGR1 [Wickerhamomyces ciferrii]
Length = 641
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 45 QGPQS--EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSL 102
Q PQS D +NTT+F+GGL P + ++ L F +G I VKIP GKGCGF++F
Sbjct: 374 QTPQSVPYTDPTNTTVFIGGLAPGIPEQTLAALFQPFGNITHVKIPPGKGCGFIRFDKRE 433
Query: 103 GQIMAINGV 111
AI G+
Sbjct: 434 DAEAAIAGM 442
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSS 33
+TEM GV+C+ RP+R+ ATPR S Q +S
Sbjct: 235 LTEMQGVWCAGRPLRVALATPRNQSNQTNQTNS 267
>gi|133711805|gb|ABO36623.1| putative RNA-binding protein [Solanum lycopersicum]
Length = 479
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
D S T++VGG+D +T++DLR F +GEI S+K+ V +GC FV + G + A +
Sbjct: 224 DESIRTLYVGGVDARITEQDLRDHFYAHGEIESIKMVVQRGCAFVTYTTREGAVKAAEEL 283
Query: 112 GHTMEGKFMMVMGMLFRHQMTQ 133
+ + K + + + R Q+ +
Sbjct: 284 ANKLVIKGLRLKLLWGRPQVPK 305
>gi|331220241|ref|XP_003322796.1| hypothetical protein PGTG_04333 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309301786|gb|EFP78377.1| hypothetical protein PGTG_04333 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 666
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 41/105 (39%), Positives = 55/105 (52%), Gaps = 15/105 (14%)
Query: 5 NGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASN---GAP-GQGPQSE-------GDS 53
NG++ P IGAA+ + Y YSS GY AP PQ+ D
Sbjct: 92 NGIF----PSPIGAASLNSTQAYYPAYSSYNGYPLAIPIAAPLATMPQTSFQENSPNDDP 147
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF 98
S+TT+FV GL +T++ L+ F +GEIA VKIP KG GFV++
Sbjct: 148 SSTTVFVAGLPACITEDTLKTFFQNFGEIAYVKIPPHKGYGFVKY 192
>gi|255719794|ref|XP_002556177.1| KLTH0H06842p [Lachancea thermotolerans]
gi|238942143|emb|CAR30315.1| KLTH0H06842p [Lachancea thermotolerans CBS 6340]
Length = 547
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
+ +NTT+F+GGL + ++ L F+ +G I +VKIP GKGCGFV++A + AI G+
Sbjct: 402 NPNNTTVFIGGLTSHTSERQLHSLFAPFGTIINVKIPPGKGCGFVKYAYRIDAEAAIQGM 461
>gi|221128187|ref|XP_002162583.1| PREDICTED: pre-mRNA-splicing factor RBM22-like [Hydra
magnipapillata]
Length = 470
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 6/80 (7%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMA 107
+S D S TT++VGGLD + ++DLR F QYGEI SV + K CGF+ + + MA
Sbjct: 224 ESPSDKSITTLYVGGLDERIKEDDLRNFFYQYGEIRSVVVASNKSCGFICYTSRQAAEMA 283
Query: 108 ----INGVGHTMEGKFMMVM 123
N V ++GK + V+
Sbjct: 284 AERSFNKV--IIKGKRLKVL 301
>gi|308198150|ref|XP_001387102.2| negative growth regulatory protein [Scheffersomyces stipitis CBS
6054]
gi|149389050|gb|EAZ63079.2| negative growth regulatory protein [Scheffersomyces stipitis CBS
6054]
Length = 690
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 37/58 (63%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
+PG PQ D +NTT+FVGGL VT+ L F +G I VKIP GK CGF++++
Sbjct: 388 SPGVQPQPYTDPNNTTVFVGGLSSEVTESTLFTLFKPFGIIQQVKIPPGKNCGFIKYS 445
>gi|331220231|ref|XP_003322791.1| hypothetical protein PGTG_04328 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309301781|gb|EFP78372.1| hypothetical protein PGTG_04328 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 897
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 34/51 (66%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF 98
+ D SNTT+FVGGL +++ L+ F +GEI VKIP KGCGFVQ+
Sbjct: 633 DASNDPSNTTVFVGGLPACISEGTLKTFFQNFGEITYVKIPPNKGCGFVQY 683
>gi|356549608|ref|XP_003543184.1| PREDICTED: zinc finger CCCH domain-containing protein 40-like
[Glycine max]
Length = 467
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
D S T++VGGLD VT++DLR F +GEI S+K+ + + C FV + G A +
Sbjct: 224 DESIKTLYVGGLDARVTEQDLRDHFYAHGEIESIKMVLQRACAFVTYTTREGAEKAAEEL 283
Query: 112 GHTMEGKFMMVMGMLFRHQMTQ 133
+ + K + + M R Q T+
Sbjct: 284 SNKLVIKGLRLKLMWGRPQTTK 305
>gi|255073423|ref|XP_002500386.1| predicted protein [Micromonas sp. RCC299]
gi|226515649|gb|ACO61644.1| predicted protein, partial [Micromonas sp. RCC299]
Length = 312
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 36/62 (58%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAING 110
D S TT++VGG+D VT++ L+ F QYG+I+SV+ K C FV F + G A
Sbjct: 230 ADESITTLYVGGIDDRVTEDALKDAFYQYGQISSVRTLYAKNCAFVTFVDRAGAEKAAEE 289
Query: 111 VG 112
G
Sbjct: 290 CG 291
>gi|149242856|ref|XP_001526474.1| hypothetical protein LELG_03032 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450597|gb|EDK44853.1| hypothetical protein LELG_03032 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 692
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 33/48 (68%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D+SNTT+FVGGL VT+ L F +G I +KIP GK CGFV++A
Sbjct: 350 DTSNTTVFVGGLSSEVTEATLFTLFKPFGTILQIKIPPGKNCGFVKYA 397
>gi|356553476|ref|XP_003545082.1| PREDICTED: zinc finger CCCH domain-containing protein 40-like
[Glycine max]
Length = 482
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
D S T++VGGLD VT++DLR F +GEI S+K+ + + C FV + G A +
Sbjct: 224 DESIKTLYVGGLDARVTEQDLRDHFYAHGEIESIKMVLQRACAFVTYTTREGAEKAAEEL 283
Query: 112 GHTMEGKFMMVMGMLFRHQMTQ 133
+ + K + + M R Q ++
Sbjct: 284 SNKLVIKGLRLKLMWGRPQTSK 305
>gi|260940363|ref|XP_002614481.1| hypothetical protein CLUG_05259 [Clavispora lusitaniae ATCC 42720]
gi|238851667|gb|EEQ41131.1| hypothetical protein CLUG_05259 [Clavispora lusitaniae ATCC 42720]
Length = 651
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 59/146 (40%), Gaps = 47/146 (32%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGY-----ASNGAPGQGPQS------ 49
+ EMNG + RP+R+ ATPR ++ ++ + Y A +P PQ
Sbjct: 249 LREMNGAWFGGRPLRVALATPRNTALLRKSPDQKNMYSGLSPAVPQSPAMIPQEFMYMGG 308
Query: 50 ------------------------------------EGDSSNTTIFVGGLDPNVTDEDLR 73
D SNTT+FVGGL V+++ L
Sbjct: 309 PQGSGGPPGPMNSSYGYFPPMMGDKNEFGMNMAGHPYSDPSNTTVFVGGLRSEVSEQTLF 368
Query: 74 QPFSQYGEIASVKIPVGKGCGFVQFA 99
F +G I +KIP GK CGF++++
Sbjct: 369 TLFKPFGTIQQIKIPPGKNCGFLKYS 394
>gi|356574477|ref|XP_003555373.1| PREDICTED: zinc finger CCCH domain-containing protein 40-like
[Glycine max]
Length = 481
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
D S T++VGGLD VT++DLR F +GEI S+K+ + + C FV + G A +
Sbjct: 224 DESIKTLYVGGLDARVTEQDLRDHFYAHGEIESIKMVLQRACAFVTYTTREGAEKAAEEL 283
Query: 112 GHTMEGKFMMVMGMLFRHQMTQ 133
+ + K + + M R Q ++
Sbjct: 284 SNKLVIKGLRLKLMWGRPQTSK 305
>gi|303279645|ref|XP_003059115.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458951|gb|EEH56247.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 419
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 35/60 (58%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
D S TT+F+GG+D VT+ DL+ F YGEI S++ K CGFV F + G A +
Sbjct: 230 DKSITTLFIGGMDERVTEGDLKDTFYAYGEIKSIRCVHAKNCGFVTFTDRAGAEKAAEAL 289
>gi|356499475|ref|XP_003518565.1| PREDICTED: zinc finger CCCH domain-containing protein 40-like
[Glycine max]
Length = 484
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
D S T++VGGLD VT++DLR F +GEI S+K+ + + C FV + G A +
Sbjct: 224 DESIKTLYVGGLDARVTEQDLRDHFYAHGEIESIKMVLQRACAFVTYTTREGAEKAAEEL 283
Query: 112 GHTMEGKFMMVMGMLFRHQMTQ 133
+ + K + + M R Q ++
Sbjct: 284 SNKLVIKGLRLKLMWGRPQTSK 305
>gi|390598149|gb|EIN07547.1| hypothetical protein PUNSTDRAFT_69821 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 1273
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 56/111 (50%), Gaps = 12/111 (10%)
Query: 23 KSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNT-----TIFVGGLDPNVTDEDLRQPFS 77
++S Y Q S+QG S P+SEG SS T ++++G LD +VT E L F+
Sbjct: 388 RASPYLQAPSNQGRAVS-------PKSEGSSSQTQTPTRSLWIGNLDSSVTSEQLIHVFA 440
Query: 78 QYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGKFMMVMGMLFR 128
YG I S+++ K CGFV F + I A + V + + G M G R
Sbjct: 441 PYGAIESLRLLPEKECGFVNFVDMADAIRAKDEVLNRLGGNIGMPNGQTVR 491
>gi|384249712|gb|EIE23193.1| hypothetical protein COCSUDRAFT_23819 [Coccomyxa subellipsoidea
C-169]
Length = 464
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMA 107
++ D T++VGGL P V D+DLR F YGEI+S+KI + C FV +A A
Sbjct: 210 EAPEDREIKTLYVGGLAPEVEDQDLRDHFYPYGEISSIKILSARHCAFVTYATRPAAERA 269
Query: 108 INGVGHTM 115
+ H +
Sbjct: 270 AQELQHKL 277
>gi|357462041|ref|XP_003601302.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355490350|gb|AES71553.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 492
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
D S T++VGGLD VT++DLR F +GEI SVK+ + + C FV + G A +
Sbjct: 224 DESIKTLYVGGLDARVTEQDLRDNFYAHGEIESVKMVLQRACAFVTYTTREGAEKAAEEL 283
Query: 112 GHTMEGKFMMVMGMLFRHQ 130
+ + K + + M R Q
Sbjct: 284 SNKLVIKGLRLKLMWGRPQ 302
>gi|238881096|gb|EEQ44734.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 875
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
D +NTT+FVGGL +V++ L F +G I VKIP GK CGFV+++N
Sbjct: 509 DPNNTTVFVGGLSSDVSEPTLHTLFKPFGLIQQVKIPPGKNCGFVKYSN 557
>gi|391330636|ref|XP_003739762.1| PREDICTED: nucleolysin TIAR-like [Metaseiulus occidentalis]
Length = 364
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 54/126 (42%), Gaps = 29/126 (23%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+T MN C R +R+ A SS QQQ P S + IFV
Sbjct: 68 ITAMNARMCLGRELRVNWA----SSAIQQQ---------------TPHRPDTSKHHHIFV 108
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANSLGQIMAINGVGHT 114
G L P + DLR+ FS +GEI+ ++ KG GFV F N AI HT
Sbjct: 109 GDLSPQIETSDLREAFSPFGEISDCRVVKDATTQKSKGYGFVSFTNKQDAENAI----HT 164
Query: 115 MEGKFM 120
M+G ++
Sbjct: 165 MDGSWL 170
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 54 SNTTIFVGGLDPNVTDED-LRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
SN T++ GGL+ + ED LRQ F ++GEI +++ KG F++F + AI
Sbjct: 212 SNCTVYCGGLNQMASSEDFLRQAFDEFGEIVDIRLFKDKGYAFIKFNSKESACRAI 267
>gi|68472181|ref|XP_719886.1| hypothetical protein CaO19.6790 [Candida albicans SC5314]
gi|68472416|ref|XP_719769.1| hypothetical protein CaO19.14082 [Candida albicans SC5314]
gi|46441601|gb|EAL00897.1| hypothetical protein CaO19.14082 [Candida albicans SC5314]
gi|46441727|gb|EAL01022.1| hypothetical protein CaO19.6790 [Candida albicans SC5314]
Length = 887
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
D +NTT+FVGGL +V++ L F +G I VKIP GK CGFV+++N
Sbjct: 517 DPNNTTVFVGGLSSDVSEPTLHTLFKPFGLIQQVKIPPGKNCGFVKYSN 565
>gi|164660242|ref|XP_001731244.1| hypothetical protein MGL_1427 [Malassezia globosa CBS 7966]
gi|159105144|gb|EDP44030.1| hypothetical protein MGL_1427 [Malassezia globosa CBS 7966]
Length = 564
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 35/57 (61%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
D +NTT+FVG L T+ LR F+ YG I S+ IP G+ CGFVQFA+ AI
Sbjct: 462 DPTNTTVFVGSLFSLATENTLRTLFAPYGPIQSINIPRGQDCGFVQFASKQDAARAI 518
>gi|82400164|gb|ABB72821.1| RRM-containing RNA-binding protein-like protein [Solanum tuberosum]
Length = 462
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 47/85 (55%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
D S T++VGG+D ++++DLR F +GEI S+K+ + +GC FV + G + A +
Sbjct: 224 DESIRTLYVGGVDARISEQDLRDQFYAHGEIESIKMVLQRGCAFVTYTTREGAVKAAEEL 283
Query: 112 GHTMEGKFMMVMGMLFRHQMTQACT 136
+ + K + + + R Q + T
Sbjct: 284 ANKLVIKGLRLKLLWGRPQAPKPDT 308
>gi|312371659|gb|EFR19788.1| hypothetical protein AND_21810 [Anopheles darlingi]
Length = 440
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 6/110 (5%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPG-QGPQSEGDSSNTTIFVGG 62
MNG + SR +R +T RK + + G S PG + + +NTT++ GG
Sbjct: 157 MNGQWLGSRSIRTNWST-RKPPAPRD---NSKGIKSGKTPGFEEIYNNTSPTNTTVYCGG 212
Query: 63 LDPN-VTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
PN +TDE +++ F+Q+G+I ++ KG F++FAN AI G
Sbjct: 213 FPPNTITDELIQKHFAQFGQIHDTRVFKDKGYAFIRFANKESAARAIEGT 262
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 10/78 (12%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 95
+PG P+++ S + IFVG L P + E LR+ F+ +GEI++ +I +G F
Sbjct: 83 SPGNQPKTD-TSQHYHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTLKSRGYAF 141
Query: 96 VQF---ANSLGQIMAING 110
V F A + I +NG
Sbjct: 142 VSFVKKAEAENAIQMMNG 159
>gi|353239139|emb|CCA71062.1| hypothetical protein PIIN_04997 [Piriformospora indica DSM 11827]
Length = 393
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 57/129 (44%), Gaps = 12/129 (9%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSG-------YQQQYSSQGGYASNGAPGQ--GPQSEGDSS 54
M GV C RP+R+ A + + + Q S N Q + D
Sbjct: 105 MQGVLCLGRPIRLSRAHAKDRARDKPELVLFANQRSRDERQRDNIVIDQFNAQWASVDPK 164
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV-GH 113
NT +FVGG+ P V ++L F+ G I +V GKGC F+ FA +AI + G
Sbjct: 165 NTKVFVGGISPRVLLQELVNRFAAMGVITNVNF--GKGCAFISFARKHDAALAIERLDGM 222
Query: 114 TMEGKFMMV 122
M+GK + V
Sbjct: 223 IMDGKSLRV 231
>gi|145347969|ref|XP_001418431.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578660|gb|ABO96724.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 386
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDP-NVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANS 101
P Q D+S TT+FVGG+DP VT++D+ F QYGEI +++ K C F+ FA
Sbjct: 221 PSQKLTPPEDASITTLFVGGVDPEKVTEDDINSRFYQYGEIKGIRVIGTKKCAFITFATR 280
Query: 102 LGQIMAINGVGHTME 116
G A +E
Sbjct: 281 EGAEKAAEDAAINLE 295
>gi|70989693|ref|XP_749696.1| differentiation regulator (Nrd1) [Aspergillus fumigatus Af293]
gi|66847327|gb|EAL87658.1| differentiation regulator (Nrd1), putative [Aspergillus fumigatus
Af293]
gi|159129104|gb|EDP54218.1| differentiation regulator (Nrd1), putative [Aspergillus fumigatus
A1163]
Length = 838
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 35/65 (53%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEG 117
++VG LD T+E LRQ FS+YGEI V K C FV F N I AI G+ + E
Sbjct: 509 VYVGNLDETWTEERLRQDFSEYGEIELVNTLREKSCAFVNFTNIANAIKAIEGMRNREEY 568
Query: 118 KFMMV 122
K +
Sbjct: 569 KRFKI 573
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 9/65 (13%)
Query: 41 GAPGQGP-------QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
G P Q P Q G S N +++G L +T+++LR+ ++G I +VKI K
Sbjct: 262 GKPSQVPTSVALAVQQSGASRN--VYLGNLPEELTEDELREDLGKFGPIDTVKIVREKAI 319
Query: 94 GFVQF 98
GFV F
Sbjct: 320 GFVHF 324
>gi|297745955|emb|CBI16011.3| unnamed protein product [Vitis vinifera]
Length = 349
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
D S T++VGGLD VT++DLR F +GEI SV++ + + C FV + G A +
Sbjct: 224 DESIKTLYVGGLDARVTEQDLRDHFYAHGEIESVRMVLQRACAFVTYTTREGAEKAAEEL 283
Query: 112 GHTMEGKFMMVMGMLFRHQ 130
+ + K + + M R Q
Sbjct: 284 SNKLVIKGLRLKLMWGRPQ 302
>gi|119480321|ref|XP_001260189.1| differentiation regulator (Nrd1), putative [Neosartorya fischeri
NRRL 181]
gi|119408343|gb|EAW18292.1| differentiation regulator (Nrd1), putative [Neosartorya fischeri
NRRL 181]
Length = 838
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 35/65 (53%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEG 117
++VG LD T+E LRQ FS+YGEI V K C FV F N I AI G+ + E
Sbjct: 509 VYVGNLDETWTEERLRQDFSEYGEIELVNTLREKSCAFVNFTNIANAIKAIEGMRNREEY 568
Query: 118 KFMMV 122
K +
Sbjct: 569 KRFKI 573
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 9/65 (13%)
Query: 41 GAPGQGP-------QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
G P Q P Q G S N +++G L +T+++LR+ ++G I +VKI K
Sbjct: 262 GKPSQVPTSVALAVQQSGASRN--VYLGNLPEELTEDELREELGKFGPIDTVKIVREKAI 319
Query: 94 GFVQF 98
GFV F
Sbjct: 320 GFVHF 324
>gi|196010826|ref|XP_002115277.1| hypothetical protein TRIADDRAFT_64182 [Trichoplax adhaerens]
gi|190582048|gb|EDV22122.1| hypothetical protein TRIADDRAFT_64182 [Trichoplax adhaerens]
Length = 432
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%)
Query: 23 KSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEI 82
KSS Q + G + Q +G ++ IF+GGL P +++++LR FS +GE+
Sbjct: 284 KSSRSNQHHKEDGQSQRSNNFRNSSQRDGQQTDYQIFIGGLTPEISEKELRNEFSVFGEV 343
Query: 83 ASVKIPVGKGCGFVQFAN 100
+K KG GFV F N
Sbjct: 344 KHIKTNTSKGFGFVSFEN 361
>gi|302808804|ref|XP_002986096.1| hypothetical protein SELMODRAFT_425040 [Selaginella moellendorffii]
gi|300146244|gb|EFJ12915.1| hypothetical protein SELMODRAFT_425040 [Selaginella moellendorffii]
Length = 398
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 16/93 (17%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
D++ T++VGGLD VT EDL+ F YG+I S+++ + C F+ +
Sbjct: 95 DATVRTLYVGGLDERVTTEDLKDNFYSYGKIESLRLVPQRACAFITYT------------ 142
Query: 112 GHTMEGKFMMVMGMLFRHQM--TQACTLQQLRP 142
T E + F+HQM C Q+++P
Sbjct: 143 --TREDAEKAAEDLSFKHQMLDLDDCKWQEIKP 173
>gi|167525647|ref|XP_001747158.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774453|gb|EDQ88082.1| predicted protein [Monosiga brevicollis MX1]
Length = 409
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 49/80 (61%), Gaps = 4/80 (5%)
Query: 48 QSEGDSSNTTIFVGGLDP--NVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLG-- 103
++ D+S TT+++GG+ P N+T +DLR F ++ ++A+V++ + FV+FA G
Sbjct: 242 EAPADTSITTLYIGGVRPDLNITADDLRDYFEKHSQVAAVRLAPKQSAAFVEFATREGAE 301
Query: 104 QIMAINGVGHTMEGKFMMVM 123
Q M I V ++G+ + VM
Sbjct: 302 QAMEIAAVNCIIKGEPLRVM 321
>gi|448097114|ref|XP_004198591.1| Piso0_001971 [Millerozyma farinosa CBS 7064]
gi|359380013|emb|CCE82254.1| Piso0_001971 [Millerozyma farinosa CBS 7064]
Length = 655
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 32/52 (61%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
Q D NTT+FVGGL V D+ L F +G I VKIP GK CGF++++
Sbjct: 416 QPFADPKNTTVFVGGLSAEVNDQTLFALFKPFGIIQQVKIPPGKNCGFIKYS 467
>gi|268578407|ref|XP_002644186.1| Hypothetical protein CBG17168 [Caenorhabditis briggsae]
Length = 244
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 14/110 (12%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGL 63
MNG + R +R A + S + + + + + S A NT+++VG +
Sbjct: 66 MNGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKA-----------DNTSVYVGNI 114
Query: 64 DPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN---SLGQIMAING 110
P TD DLR FS YG+IA V++ + FV++ + IM +NG
Sbjct: 115 SPQTTDVDLRDSFSTYGDIAEVRVFKTQRYAFVRYEKKECATKAIMEMNG 164
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 10/74 (13%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANSLGQIM 106
S + +FVG L +V++E L+ F ++GE++ K+ KG GFV F N
Sbjct: 2 SEHFHVFVGDLSKDVSNELLKSTFQKFGEVSEAKVIRDAQTQKSKGYGFVSFPNKQNAEN 61
Query: 107 AINGVGHTMEGKFM 120
AI+G M GK++
Sbjct: 62 AISG----MNGKWI 71
>gi|384495849|gb|EIE86340.1| hypothetical protein RO3G_11051 [Rhizopus delemar RA 99-880]
Length = 1099
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/109 (30%), Positives = 47/109 (43%), Gaps = 18/109 (16%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ EM G Y S +R+ A P+ GP G TT+FV
Sbjct: 154 LEEMQGAYVGSSRIRVSVARPKAKIE------------------TGPVVSGPEEITTVFV 195
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAIN 109
GGL+ +T+E+LR F +G I +VKI K F+Q+ AI+
Sbjct: 196 GGLNNTITEEELRAYFGTFGNIVAVKIIPLKNIAFIQYEKKSSAEQAIS 244
>gi|225434698|ref|XP_002280897.1| PREDICTED: zinc finger CCCH domain-containing protein 49-like
[Vitis vinifera]
Length = 474
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
D S T++VGGLD VT++DLR F +GEI SV++ + + C FV + G A +
Sbjct: 224 DESIKTLYVGGLDARVTEQDLRDHFYAHGEIESVRMVLQRACAFVTYTTREGAEKAAEEL 283
Query: 112 GHTMEGKFMMVMGMLFRHQ 130
+ + K + + M R Q
Sbjct: 284 SNKLVIKGLRLKLMWGRPQ 302
>gi|294658145|ref|XP_002770728.1| DEHA2F02596p [Debaryomyces hansenii CBS767]
gi|202952907|emb|CAR66259.1| DEHA2F02596p [Debaryomyces hansenii CBS767]
Length = 747
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
GQ Q D +NTT+FVGGL VT++ L F +G I VKIP GK CGF++++
Sbjct: 411 GQHGQPFTDPNNTTVFVGGLSSEVTEQTLFTLFKPFGIIQQVKIPPGKNCGFIKYS 466
>gi|241953763|ref|XP_002419603.1| RNA-binding protein, putative; U1 snRNP protein, putative [Candida
dubliniensis CD36]
gi|223642943|emb|CAX43198.1| RNA-binding protein, putative [Candida dubliniensis CD36]
Length = 792
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 33/49 (67%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D +NTT+FVGGL +V++ L F +G I VKIP GK CGFV+++
Sbjct: 460 ADPNNTTVFVGGLSADVSEPTLHTLFKPFGLIQQVKIPPGKNCGFVKYS 508
>gi|448111139|ref|XP_004201770.1| Piso0_001971 [Millerozyma farinosa CBS 7064]
gi|359464759|emb|CCE88464.1| Piso0_001971 [Millerozyma farinosa CBS 7064]
Length = 655
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 32/52 (61%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
Q D NTT+FVGGL V D+ L F +G I VKIP GK CGF++++
Sbjct: 416 QPFADPKNTTVFVGGLSSEVNDQTLFALFKPFGIIQQVKIPPGKNCGFIKYS 467
>gi|409082590|gb|EKM82948.1| hypothetical protein AGABI1DRAFT_104752 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1296
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 47 PQSEGDSSNT-----TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANS 101
P+SEG SS ++++G LD +VT E L F+ YG I S+++ K CGFV F +
Sbjct: 443 PKSEGQSSQIQTPTRSLWIGNLDSSVTSEQLIHVFAPYGAIESLRLLPEKECGFVNFVDQ 502
Query: 102 LGQIMAINGVGHTMEGKFMMVMGMLFR 128
+ A + V + + G M G L R
Sbjct: 503 ADALRAKDDVLNRLGGNINMPNGQLVR 529
>gi|47086019|ref|NP_998379.1| pre-mRNA-splicing factor RBM22 [Danio rerio]
gi|326677871|ref|XP_003200934.1| PREDICTED: pre-mRNA-splicing factor RBM22-like [Danio rerio]
gi|82237380|sp|Q6NZZ9.1|RBM22_DANRE RecName: Full=Pre-mRNA-splicing factor RBM22; AltName:
Full=RNA-binding motif protein 22
gi|41388933|gb|AAH65892.1| RNA binding motif protein 22 [Danio rerio]
gi|49619055|gb|AAT68112.1| FLJ10290-like [Danio rerio]
Length = 425
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D S TT+++GGL NVTD +LR F Q+GEI ++ I + C F+QFA
Sbjct: 228 DKSITTLYIGGLGENVTDSELRNHFYQFGEIRTITIVQRQQCAFIQFA 275
>gi|426200456|gb|EKV50380.1| hypothetical protein AGABI2DRAFT_176766 [Agaricus bisporus var.
bisporus H97]
Length = 1296
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 47 PQSEGDSSNT-----TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANS 101
P+SEG SS ++++G LD +VT E L F+ YG I S+++ K CGFV F +
Sbjct: 443 PKSEGQSSQIQTPTRSLWIGNLDSSVTSEQLIHVFAPYGAIESLRLLPEKECGFVNFVDQ 502
Query: 102 LGQIMAINGVGHTMEGKFMMVMGMLFR 128
+ A + V + + G M G L R
Sbjct: 503 ADALRAKDDVLNRLGGNINMPNGQLVR 529
>gi|157422918|gb|AAI53464.1| RNA binding motif protein 22 [Danio rerio]
Length = 425
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D S TT+++GGL NVTD +LR F Q+GEI ++ I + C F+QFA
Sbjct: 228 DKSITTLYIGGLGENVTDSELRNHFYQFGEIRTITIVQRQQCAFIQFA 275
>gi|326677860|ref|XP_003200931.1| PREDICTED: pre-mRNA-splicing factor RBM22-like, partial [Danio
rerio]
Length = 407
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D S TT+++GGL NVTD +LR F Q+GEI ++ I + C F+QFA
Sbjct: 210 DKSITTLYIGGLGENVTDSELRNHFYQFGEIRTITIVQRQQCAFIQFA 257
>gi|302800509|ref|XP_002982012.1| hypothetical protein SELMODRAFT_154896 [Selaginella moellendorffii]
gi|300150454|gb|EFJ17105.1| hypothetical protein SELMODRAFT_154896 [Selaginella moellendorffii]
Length = 398
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 9/70 (12%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF---------ANS 101
D++ T++VGGLD VT EDL+ F YGEI S+++ + C F+ + A
Sbjct: 219 DDTTVRTLYVGGLDERVTTEDLKDNFYSYGEIESLRLVPQRACAFITYTTREDAEKAAED 278
Query: 102 LGQIMAINGV 111
L + +NGV
Sbjct: 279 LAHKLVVNGV 288
>gi|238501882|ref|XP_002382175.1| differentiation regulator (Nrd1), putative [Aspergillus flavus
NRRL3357]
gi|220692412|gb|EED48759.1| differentiation regulator (Nrd1), putative [Aspergillus flavus
NRRL3357]
gi|391863684|gb|EIT72984.1| RRM domain protein [Aspergillus oryzae 3.042]
Length = 836
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEG 117
++VG LD + ++E LRQ FS+YGEI V K C FV F N I AI G+ + E
Sbjct: 509 VYVGNLDESWSEERLRQDFSEYGEIELVNTLREKSCAFVNFTNIANAIKAIEGMRNREEY 568
Query: 118 KFMMV 122
K +
Sbjct: 569 KRFKI 573
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 9/65 (13%)
Query: 41 GAPGQGP-------QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
G P Q P Q G S N +++G L +T+++LR+ ++G I +VKI K
Sbjct: 262 GKPSQVPTSVALAVQQSGASRN--VYLGNLPEEMTEDELREELGKFGPIDTVKIVKEKAI 319
Query: 94 GFVQF 98
GFV F
Sbjct: 320 GFVHF 324
>gi|121715312|ref|XP_001275265.1| differentiation regulator (Nrd1), putative [Aspergillus clavatus
NRRL 1]
gi|119403422|gb|EAW13839.1| differentiation regulator (Nrd1), putative [Aspergillus clavatus
NRRL 1]
Length = 838
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 35/65 (53%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEG 117
++VG LD T++ LRQ FS+YGEI V K C FV F N I AI G+ + E
Sbjct: 509 VYVGNLDETWTEDRLRQDFSEYGEIELVNTLREKSCAFVNFTNIANAIKAIEGMRNRDEY 568
Query: 118 KFMMV 122
K +
Sbjct: 569 KRFKI 573
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 9/65 (13%)
Query: 41 GAPGQGP-------QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
G P Q P Q G S N +++G L +T+++LR+ ++G I +VKI K
Sbjct: 262 GKPSQVPTSVALAVQQSGASRN--VYLGNLPEELTEDELREELGKFGPIDTVKIVREKAI 319
Query: 94 GFVQF 98
GFV F
Sbjct: 320 GFVHF 324
>gi|302808802|ref|XP_002986095.1| hypothetical protein SELMODRAFT_44024 [Selaginella moellendorffii]
gi|300146243|gb|EFJ12914.1| hypothetical protein SELMODRAFT_44024 [Selaginella moellendorffii]
Length = 366
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 9/69 (13%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF---------ANSL 102
D++ T++VGGLD VT EDL+ F YGEI S+++ + C F+ + A L
Sbjct: 220 DTTVRTLYVGGLDERVTTEDLKDNFYSYGEIESLRLVPQRACAFITYTTREDAEKAAEDL 279
Query: 103 GQIMAINGV 111
+ +NGV
Sbjct: 280 AHKLVVNGV 288
>gi|320166721|gb|EFW43620.1| Rbm22 protein [Capsaspora owczarzaki ATCC 30864]
Length = 409
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSL 102
D S TT++VG LD +++++DLR F Q+GEI S+ I C FV F L
Sbjct: 270 ADKSITTLYVGNLDDSISEDDLRDYFYQFGEIRSITISRKAACAFVAFTTRL 321
>gi|242776854|ref|XP_002478915.1| differentiation regulator (Nrd1), putative [Talaromyces stipitatus
ATCC 10500]
gi|218722534|gb|EED21952.1| differentiation regulator (Nrd1), putative [Talaromyces stipitatus
ATCC 10500]
Length = 831
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 34/65 (52%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEG 117
+++G LD T+E LRQ FS+YGEI V K C FV F N I AI G+ E
Sbjct: 510 VYIGNLDETWTEERLRQDFSEYGEIELVNTLREKSCAFVNFTNIANAIKAIEGMRSREEY 569
Query: 118 KFMMV 122
K +
Sbjct: 570 KRFKI 574
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 41 GAPGQGP-------QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
G P Q P Q G S N +++G L ++T+++LR+ ++G I +VK+ K
Sbjct: 263 GKPSQVPTSVAVAVQQSGASRN--VYLGSLPEDITEDELREELGKFGPIDTVKLVKEKAI 320
Query: 94 GFVQFANSLGQIMAI 108
GFV F + I A+
Sbjct: 321 GFVHFLSISNAIKAV 335
>gi|374256067|gb|AEZ00895.1| putative zinc finger CCCH-type family protein, partial [Elaeis
guineensis]
Length = 307
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
D S T++VGGLD +T++DLR F +GEI S+++ + + C FV + G A +
Sbjct: 224 DESIKTLYVGGLDARITEQDLRDHFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAEEL 283
Query: 112 GHTM 115
+ +
Sbjct: 284 ANKL 287
>gi|354545611|emb|CCE42339.1| hypothetical protein CPAR2_808880 [Candida parapsilosis]
Length = 739
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 32/48 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D +NTT+FVGGL VT+ L F +G I +KIP GK CGFV+++
Sbjct: 472 DPNNTTVFVGGLSSEVTEATLFTLFKPFGVIQQIKIPPGKNCGFVKYS 519
>gi|347967649|ref|XP_312633.5| AGAP002335-PA [Anopheles gambiae str. PEST]
gi|333468363|gb|EAA07505.5| AGAP002335-PA [Anopheles gambiae str. PEST]
Length = 458
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 16/115 (13%)
Query: 4 MNGVYCSSRPMRIGAAT-----PRKSSGYQQQYSSQGGYASNGAPG-QGPQSEGDSSNTT 57
MNG + SR +R +T PR++S G S PG + + +NTT
Sbjct: 157 MNGQWLGSRSIRTNWSTRKPPAPRENSK---------GIKSGKTPGFEEIYNNTSPTNTT 207
Query: 58 IFVGGLDPN-VTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
++ GG PN +TDE +++ F+Q+G I ++ KG F++FA+ AI G
Sbjct: 208 VYCGGFPPNAITDELIQKHFAQFGHINDTRVFKDKGYAFIRFASKESAARAIEGT 262
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 10/81 (12%)
Query: 40 NGAPGQGPQSEGDSS-NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKG 92
N A G Q + D+S + IFVG L P + E LR+ F+ +GEI++ +I +G
Sbjct: 79 NWATSAGNQPKTDTSQHHHIFVGDLSPEIDTETLREAFAPFGEISNCRIVRDPQTLKSRG 138
Query: 93 CGFVQF---ANSLGQIMAING 110
FV F A + I +NG
Sbjct: 139 YAFVSFVKKAEAENAIAMMNG 159
>gi|340905286|gb|EGS17654.1| RNA recognition motif-containing protein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 801
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 33/65 (50%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEG 117
+++G LD T+E LRQ FS+YGEI V K C FV F N I AI + E
Sbjct: 515 VYIGNLDETFTEEKLRQDFSEYGEIELVNTLREKSCAFVNFTNIANAIKAIEAIKSKEEY 574
Query: 118 KFMMV 122
K V
Sbjct: 575 KKFKV 579
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 9/76 (11%)
Query: 41 GAPGQGP-------QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
G P Q P Q +G S N +++G L ++T+E++R+ ++G I +VKI K
Sbjct: 268 GKPSQVPTSVALAVQQQGASRN--VYLGNLPEDITEEEIREDLGKFGPIDTVKIVREKNI 325
Query: 94 GFVQFANSLGQIMAIN 109
FV F + I A+N
Sbjct: 326 AFVHFLSIANAIKAVN 341
>gi|448520574|ref|XP_003868310.1| Ngr1 protein [Candida orthopsilosis Co 90-125]
gi|380352650|emb|CCG25406.1| Ngr1 protein [Candida orthopsilosis]
Length = 696
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 38 ASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQ 97
AS P PQ D +NTT+FVGGL VT+ L F +G I +KIP GK CGFV+
Sbjct: 409 ASLQPPISSPQY-SDPNNTTVFVGGLSSEVTEATLFTLFKPFGVIQQIKIPPGKNCGFVK 467
Query: 98 FA 99
++
Sbjct: 468 YS 469
>gi|268531322|ref|XP_002630787.1| Hypothetical protein CBG02484 [Caenorhabditis briggsae]
Length = 403
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 58/108 (53%), Gaps = 8/108 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +MNG + R +R AT + G Q++ S+ Y Q+ GD NT+++V
Sbjct: 189 IEQMNGQWLGRRTIRTNWAT--RKPGDQEKPSN---YNEKSYDEVYNQTSGD--NTSVYV 241
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
G + N+T++++RQ F+ YG I+ V+I +G FV+F N AI
Sbjct: 242 GNI-ANLTEDEIRQAFASYGRISEVRIFKMQGYAFVKFENKNAAAKAI 288
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFV 96
PGQ P + + +FVG L V ++ LR+ F +G+++ K+ KG GFV
Sbjct: 118 PGQQPSKIDTTRHFHVFVGDLSSEVDNQKLREAFIPFGDVSDAKVIRDTNTTKSKGYGFV 177
Query: 97 QF 98
+
Sbjct: 178 SY 179
>gi|341900388|gb|EGT56323.1| CBN-TIAR-1 protein [Caenorhabditis brenneri]
Length = 399
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 8/108 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +MNG + R +R AT + + + ++ Y Q+ GD NT+++V
Sbjct: 189 IEQMNGQWLGRRTIRTNWATRKPGDQEKPVHYNEKSYDE-----IYNQTSGD--NTSVYV 241
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
G + N+++ED+RQ F+ YG I+ V+I +G FV+F N AI
Sbjct: 242 GNI-ANLSEEDIRQAFASYGRISEVRIFKMQGYAFVKFDNKDAAAKAI 288
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFV 96
PGQ P + + +FVG L V ++ LR+ F +G+++ K+ KG GFV
Sbjct: 118 PGQQPSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFV 177
Query: 97 QF 98
+
Sbjct: 178 SY 179
>gi|344232977|gb|EGV64850.1| RNA-binding domain-containing protein [Candida tenuis ATCC 10573]
Length = 617
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
Q D +NTT+FVGGL V+++ L F +G + +KIP GK CGFV+++
Sbjct: 386 QPYNDPTNTTVFVGGLSSEVSEQTLFALFQPFGVVQQIKIPPGKNCGFVKYS 437
>gi|327299358|ref|XP_003234372.1| nrd1 [Trichophyton rubrum CBS 118892]
gi|326463266|gb|EGD88719.1| nrd1 [Trichophyton rubrum CBS 118892]
Length = 837
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 34/65 (52%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEG 117
+++G LD T+E LRQ FS YGEI V K C FV F N I AI G+ + E
Sbjct: 507 VYIGNLDETWTEERLRQDFSAYGEIELVNTLREKSCAFVNFTNIANAIKAIEGMRGSEEY 566
Query: 118 KFMMV 122
K +
Sbjct: 567 KRFKI 571
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 41 GAPGQGPQS-----EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGF 95
G P Q P S + ++ +++G L +VT+E+LR+ ++G I +VK+ K GF
Sbjct: 260 GKPSQVPTSVALAVQQSHASRNVYLGNLHEDVTEEELREELGKFGPIDTVKLVKEKSIGF 319
Query: 96 VQFANSLGQIMAI 108
V F + I A+
Sbjct: 320 VHFLSISNAIKAV 332
>gi|449453956|ref|XP_004144722.1| PREDICTED: zinc finger CCCH domain-containing protein 40-like
[Cucumis sativus]
gi|449525922|ref|XP_004169965.1| PREDICTED: zinc finger CCCH domain-containing protein 40-like
[Cucumis sativus]
Length = 517
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
D S T++VGGLD V+++DLR F +GEI S+++ + + C FV + G A +
Sbjct: 224 DESIRTLYVGGLDARVSEQDLRDNFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAEEL 283
Query: 112 GHTMEGKFMMVMGMLFRHQMTQA 134
+ + + + + M R Q +A
Sbjct: 284 SNKLVIRGLRLKLMWGRPQAPKA 306
>gi|380491366|emb|CCF35370.1| RNA recognition domain-containing protein [Colletotrichum
higginsianum]
Length = 747
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 33/65 (50%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEG 117
+++G LD T+E LRQ FS+YGEI V K C FV F N I AI V E
Sbjct: 522 VYIGNLDETWTEERLRQDFSEYGEIELVNTLREKSCAFVNFTNIANAIKAIEAVRSKDEY 581
Query: 118 KFMMV 122
K V
Sbjct: 582 KKFKV 586
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Query: 41 GAPGQGP-------QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
G P Q P Q G S N +++G L ++T+E+LR+ ++G I +VKI K
Sbjct: 275 GKPSQVPTSVALAVQQSGASRN--VYLGNLSEDITEEELREDLGKFGAIDTVKIVREKSI 332
Query: 94 GFVQFANSLGQIMAIN 109
F+ F + I A++
Sbjct: 333 AFIHFLSIANAIKAVS 348
>gi|339233086|ref|XP_003381660.1| heterogeneous nuclear ribonucleoprotein A1 [Trichinella spiralis]
gi|316979494|gb|EFV62286.1| heterogeneous nuclear ribonucleoprotein A1 [Trichinella spiralis]
Length = 322
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGK---GCGFVQFANSLG 103
E D N IF+GG+ N +DEDLR +S++GEI V + PV K G GFV +A+
Sbjct: 21 EKDEQNRKIFIGGITVNTSDEDLRTFYSKWGEITDVVVMRDPVSKRSRGFGFVTYADPEQ 80
Query: 104 QIMAINGVGHTMEGK 118
A+ H ++GK
Sbjct: 81 VNAAMAARPHLIDGK 95
>gi|425765883|gb|EKV04527.1| Differentiation regulator (Nrd1), putative [Penicillium digitatum
Pd1]
gi|425766873|gb|EKV05466.1| Differentiation regulator (Nrd1), putative [Penicillium digitatum
PHI26]
Length = 821
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 31/55 (56%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
++VG LD T+E LRQ FS+YGEI V K C FV F N I AI G+
Sbjct: 504 NVYVGNLDEAWTEERLRQDFSEYGEIELVNTLREKSCAFVNFTNIANAIKAIEGM 558
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 9/65 (13%)
Query: 41 GAPGQGP-------QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
G P Q P Q G S N +++G L +++DLR+ S++G I +VKI K
Sbjct: 258 GKPSQVPTSVALAVQQSGASRN--VYLGNLAEETSEDDLREDLSKFGPIDTVKIVKEKAI 315
Query: 94 GFVQF 98
GFV F
Sbjct: 316 GFVHF 320
>gi|350635221|gb|EHA23583.1| hypothetical protein ASPNIDRAFT_52474 [Aspergillus niger ATCC 1015]
Length = 833
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 35/65 (53%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEG 117
++VG LD ++E LRQ FS+YGEI V K C FV F N I AI G+ + E
Sbjct: 508 VYVGNLDETWSEERLRQDFSEYGEIELVNTLREKSCAFVNFTNIANAIKAIEGMRNRDEY 567
Query: 118 KFMMV 122
K +
Sbjct: 568 KRFKI 572
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF 98
Q G S N +++G L ++T+E+LR+ ++G I +VKI K GFV F
Sbjct: 275 QQSGASRN--VYLGNLSEDMTEEELREELGKFGPIDTVKIVKEKAIGFVHF 323
>gi|328769593|gb|EGF79636.1| hypothetical protein BATDEDRAFT_19718 [Batrachochytrium
dendrobatidis JAM81]
Length = 431
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 20/114 (17%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGL 63
+ G R +R+ +TP+ +Q + AP P TT+F+G L
Sbjct: 243 LTGTELDGREIRVDVSTPKPPRDGNRQGRKE-------APQSAP-------TTTLFLGNL 288
Query: 64 DPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANSLGQIMAINGV 111
NVT++++R+ FSQYG++ SV+ P KG G+V++ + A+ G+
Sbjct: 289 SFNVTEDEIRESFSQYGQLVSVRFPTDRDTGAFKGFGYVEYGDVETAQKAVEGL 342
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 11/88 (12%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFV 96
P + P++E + N+T+FVG L NV +E L F+ G + S +I KG G+V
Sbjct: 171 PTKKPKTE-EPVNSTVFVGNLSWNVDEEMLAATFADCGTVESARIITDKETGRAKGFGYV 229
Query: 97 QF--ANSLGQIMAINGVGHTMEGKFMMV 122
F A++L MA+ G ++G+ + V
Sbjct: 230 TFESADALTAAMALTGT--ELDGREIRV 255
>gi|367027004|ref|XP_003662786.1| hypothetical protein MYCTH_2303808 [Myceliophthora thermophila ATCC
42464]
gi|347010055|gb|AEO57541.1| hypothetical protein MYCTH_2303808 [Myceliophthora thermophila ATCC
42464]
Length = 814
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 33/65 (50%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEG 117
+++G LD T+E LRQ FS+YGEI V K C FV F N I AI V E
Sbjct: 518 VYIGNLDETWTEERLRQDFSEYGEIELVNTLREKSCAFVNFTNIANAIKAIEAVRSKEEY 577
Query: 118 KFMMV 122
K V
Sbjct: 578 KKFKV 582
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 41 GAPGQGP-------QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
G P Q P Q G S N +++G L ++T+E+LR+ ++G I +VKI K
Sbjct: 271 GKPSQVPTSVALAVQQSGASRN--VYLGNLPEDITEEELREDLGKFGPIDTVKIVREKNI 328
Query: 94 GFVQFANSLGQIMAI 108
FV F + I A+
Sbjct: 329 AFVHFLSIANAIKAV 343
>gi|145234342|ref|XP_001400542.1| negative regulator of differentiation 1 [Aspergillus niger CBS
513.88]
gi|134057488|emb|CAK48842.1| unnamed protein product [Aspergillus niger]
Length = 833
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 35/65 (53%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEG 117
++VG LD ++E LRQ FS+YGEI V K C FV F N I AI G+ + E
Sbjct: 508 VYVGNLDETWSEERLRQDFSEYGEIELVNTLREKSCAFVNFTNIANAIKAIEGMRNRDEY 567
Query: 118 KFMMV 122
K +
Sbjct: 568 KRFKI 572
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 41 GAPGQGP-------QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
G P Q P Q G S N +++G L ++T+E+LR+ ++G I +VKI K
Sbjct: 261 GKPSQVPTSVALAVQQSGASRN--VYLGNLSEDMTEEELREELGKFGPIDTVKIVKEKAI 318
Query: 94 GFVQF 98
GFV F
Sbjct: 319 GFVHF 323
>gi|357125138|ref|XP_003564252.1| PREDICTED: zinc finger CCCH domain-containing protein 49-like
[Brachypodium distachyon]
Length = 488
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
D S T+++GGLD VT++DLR F +GEI S+++ + + C FV + G A +
Sbjct: 224 DESIRTLYIGGLDNRVTEQDLRDQFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAEEL 283
Query: 112 GHTMEGKFMMVMGMLFRHQMTQA 134
+ + K + + M + Q +A
Sbjct: 284 ANKLVIKGVRLKLMWGKPQAPRA 306
>gi|406864572|gb|EKD17617.1| RNA recognition domain-containing protein [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 821
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 31/54 (57%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
++VG LD + T+E LRQ FS+YGEI V K C FV F N I AI +
Sbjct: 513 VYVGNLDESWTEERLRQDFSEYGEIELVNTLREKSCAFVNFTNIANAIKAIEAI 566
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 9/75 (12%)
Query: 41 GAPGQGP-------QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
G P Q P Q G S N +++G L+ +VT+++LR+ S++G I +VKI K
Sbjct: 266 GKPSQVPTSVALAVQQSGASRN--VYLGNLEESVTEDELREDLSKFGPIDTVKIVREKAI 323
Query: 94 GFVQFANSLGQIMAI 108
GFV F + I A+
Sbjct: 324 GFVHFLSIGNAIKAV 338
>gi|358367627|dbj|GAA84245.1| differentiation regulator [Aspergillus kawachii IFO 4308]
Length = 833
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 35/65 (53%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEG 117
++VG LD ++E LRQ FS+YGEI V K C FV F N I AI G+ + E
Sbjct: 508 VYVGNLDETWSEERLRQDFSEYGEIELVNTLREKSCAFVNFTNIANAIKAIEGMRNRDEY 567
Query: 118 KFMMV 122
K +
Sbjct: 568 KRFKI 572
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 41 GAPGQGP-------QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
G P Q P Q G S N +++G L ++T+E+LR+ ++G I +VKI K
Sbjct: 261 GKPSQVPTSVALAVQQSGASRN--VYLGNLSEDMTEEELREELGKFGPIDTVKIVKEKAI 318
Query: 94 GFVQF 98
GFV F
Sbjct: 319 GFVHF 323
>gi|115400693|ref|XP_001215935.1| negative regulator of differentiation 1 [Aspergillus terreus
NIH2624]
gi|114191601|gb|EAU33301.1| negative regulator of differentiation 1 [Aspergillus terreus
NIH2624]
Length = 836
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 35/65 (53%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEG 117
++VG LD + +E LRQ FS+YGEI V K C FV F N I AI G+ + E
Sbjct: 509 VYVGNLDESWAEERLRQDFSEYGEIELVNTLREKSCAFVNFTNIANAIKAIEGMRNREEY 568
Query: 118 KFMMV 122
K +
Sbjct: 569 KRFKI 573
>gi|195382900|ref|XP_002050166.1| GJ21992 [Drosophila virilis]
gi|194144963|gb|EDW61359.1| GJ21992 [Drosophila virilis]
Length = 910
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 13/117 (11%)
Query: 14 MRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLR 73
M + +A + + Q S ASN G GD + T +++G L+P ++++ L
Sbjct: 150 MAVASAPVSQQQKPEPQAPSTSQQASNARDAGGSFDTGDPNTTNLYLGNLNPKISEQQLM 209
Query: 74 QPFSQYGEIASVKI---------PVGKGCGFVQFANSLGQIMAINGVGHTMEGKFMM 121
+ F +YG +AS+KI G+ CGFV + + A+ T+ G+++M
Sbjct: 210 EIFGRYGPLASIKIMWPRSEEEKQRGRNCGFVAYMSRKDAERAL----RTLNGRYIM 262
>gi|83283985|gb|ABC01900.1| RRM-containing RNA-binding protein-like protein [Solanum tuberosum]
Length = 487
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 44 GQGPQSE--GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANS 101
G+ P E D S T++VGG+D ++++DLR F +GEI S+K+ + +GC FV +
Sbjct: 214 GEMPSLEPPDDESIRTLYVGGVDARISEQDLRDQFYAHGEIESIKMVLQRGCAFVTYTTR 273
Query: 102 LGQIMA 107
G + A
Sbjct: 274 EGAVKA 279
>gi|297849030|ref|XP_002892396.1| hypothetical protein ARALYDRAFT_470757 [Arabidopsis lyrata subsp.
lyrata]
gi|297338238|gb|EFH68655.1| hypothetical protein ARALYDRAFT_470757 [Arabidopsis lyrata subsp.
lyrata]
Length = 481
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF--------- 98
+S D S T++VGGL+ + ++D+R F YGEI S++I K C FV +
Sbjct: 220 ESPDDESIKTLYVGGLNSRILEQDIRDQFYAYGEIESIRILADKACAFVTYTSREGAEKA 279
Query: 99 ANSLGQIMAING 110
A L + +NG
Sbjct: 280 AQELANRLVVNG 291
>gi|432877067|ref|XP_004073090.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like [Oryzias
latipes]
Length = 282
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 7/104 (6%)
Query: 45 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQF 98
Q +SE + IFVGGL ++ ++DL FSQYGE+ + +I K G GFV F
Sbjct: 86 QADESEARAKVKKIFVGGLKNDIQEDDLTDYFSQYGEVENSEIMSEKTTGKKRGFGFVHF 145
Query: 99 ANSLGQIMAINGVGHTMEGKFMMVMGMLFRHQMTQACTLQQLRP 142
+ MA+ HT+ G + V + + +M QA + ++ P
Sbjct: 146 TDDYAADMAVAVPFHTVNGHRVEVKKSVPKQEM-QAPSRIRMTP 188
>gi|346319705|gb|EGX89306.1| negative regulator of differentiation 1 [Cordyceps militaris CM01]
Length = 868
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV-GHTME 116
++VG LD T+E LRQ FS+YGEI V K C FV F N I AI + G
Sbjct: 589 VYVGNLDETWTEERLRQDFSEYGEIELVNTLREKSCAFVNFTNIANAIKAIEAIRGRDDY 648
Query: 117 GKFMMVMG 124
KF + G
Sbjct: 649 KKFKVNFG 656
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMA 107
Q G S N +++G L +VTD ++R+ ++G I +VK+ K F+ + + I A
Sbjct: 356 QQSGASRN--VYLGNLPEDVTDAEIREDLGKFGPIDTVKLVREKSIAFIHYLSIANAIKA 413
Query: 108 I 108
+
Sbjct: 414 V 414
>gi|344301504|gb|EGW31816.1| hypothetical protein SPAPADRAFT_56576 [Spathaspora passalidarum
NRRL Y-27907]
Length = 632
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 32/52 (61%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
Q D +NTT+FVGGL V++ L F +G I VKIP GK CGFV++
Sbjct: 380 QPYADPTNTTVFVGGLSSEVSEPTLFTLFKPFGIIQQVKIPPGKNCGFVKYT 431
>gi|407917568|gb|EKG10872.1| hypothetical protein MPH_11874 [Macrophomina phaseolina MS6]
Length = 758
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 34/65 (52%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEG 117
+++G LD + T++ LRQ FS+YGEI V K C FV F N I AI V E
Sbjct: 433 VYIGNLDESWTEDRLRQDFSEYGEIELVNTLREKSCAFVNFTNIANAIKAIEAVRQKEEY 492
Query: 118 KFMMV 122
K V
Sbjct: 493 KRFKV 497
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 41 GAPGQGP-------QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
G P Q P Q G S N +++G L +VT+E+LR+ ++G I +VKI K
Sbjct: 186 GKPSQVPTSVALAVQQSGASRN--VYLGNLPEDVTEEELREDLGKFGPIDTVKIVREKAI 243
Query: 94 GFVQFANSLGQIMAI 108
GFV F + I A+
Sbjct: 244 GFVHFLSIGNAIKAV 258
>gi|429856547|gb|ELA31452.1| negative regulator of differentiation 1 [Colletotrichum
gloeosporioides Nara gc5]
Length = 709
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 33/65 (50%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEG 117
+++G LD T+E LRQ FS+YGEI V K C FV F N I AI V E
Sbjct: 442 VYIGNLDETWTEERLRQDFSEYGEIELVNALREKSCAFVNFTNIANAIKAIEAVRSKDEY 501
Query: 118 KFMMV 122
K V
Sbjct: 502 KKFKV 506
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Query: 41 GAPGQGP-------QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
G P Q P Q G S N +++G L ++T+E+LR+ ++G + ++KI K
Sbjct: 195 GKPSQVPTSVALAVQQSGASRN--VYLGNLPEDITEEELREDLGKFGAVDTIKIVREKSI 252
Query: 94 GFVQFANSLGQIMAIN 109
F+ F + I A++
Sbjct: 253 AFIHFLSIANAIKAVS 268
>gi|427798579|gb|JAA64741.1| Hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 381
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 36/58 (62%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAIN 109
D+S TT++VG L +T++DLR F QYGEI V + + C FVQF N + +A +
Sbjct: 228 DTSITTLYVGNLGDRLTEKDLRDHFYQYGEIRGVTMLARQQCAFVQFTNRVSAELAAD 285
>gi|402079023|gb|EJT74288.1| differentiation regulator [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 804
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 33/65 (50%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEG 117
+++G LD T+E LRQ FS+YGEI V K C FV F N I AI V E
Sbjct: 528 VYIGNLDETWTEERLRQDFSEYGEIELVNTLREKSCAFVNFTNIANAIKAIEAVRSKDEY 587
Query: 118 KFMMV 122
K V
Sbjct: 588 KKFKV 592
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 9/76 (11%)
Query: 41 GAPGQGP-------QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
G P Q P Q G S N +++G L ++ +E+LR+ ++G I ++KI K
Sbjct: 281 GKPSQVPTSVALAVQQSGASRN--VYLGNLPEDIAEEELREDLGKFGAIDTIKIVREKSI 338
Query: 94 GFVQFANSLGQIMAIN 109
FV F + I A++
Sbjct: 339 AFVHFLSIANAIKAVS 354
>gi|448519256|ref|XP_003868046.1| hypothetical protein CORT_0B09070 [Candida orthopsilosis Co 90-125]
gi|380352385|emb|CCG22611.1| hypothetical protein CORT_0B09070 [Candida orthopsilosis]
Length = 185
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 54/104 (51%), Gaps = 17/104 (16%)
Query: 28 QQQYSSQGGYA----SNGAPG-QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEI 82
QQQY S+G A SNGA Q P + + +FVG L P+ TD+ LR F +Y +
Sbjct: 64 QQQYQSKGSAAITSSSNGATSTQEP--SWNPKHFRLFVGNLGPDATDDLLRGAFGKYSSM 121
Query: 83 ASVKIPVG------KGCGFVQFANSLGQIMAINGVGHTMEGKFM 120
++V +P+ KG GFV F+N+ + A M GK++
Sbjct: 122 SNVHVPIDKHTKKPKGYGFVAFSNADDYLQAFKD----MNGKYI 161
>gi|299469902|emb|CBN76756.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 774
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 10/79 (12%)
Query: 37 YASNGAP-GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK---- 91
YAS P Q + DS T++VG LDP+VT++D+R+ F++ G IASV+IP K
Sbjct: 299 YASMSDPMASAAQPDPDS---TVYVGNLDPSVTEDDIREFFAECGAIASVRIPQDKETGK 355
Query: 92 --GCGFVQFANSLGQIMAI 108
G FV FA G + A+
Sbjct: 356 MRGIAFVAFAKHSGVLQAL 374
>gi|302495851|ref|XP_003009939.1| RNA-binding protein [Arthroderma benhamiae CBS 112371]
gi|291173461|gb|EFE29294.1| RNA-binding protein [Arthroderma benhamiae CBS 112371]
Length = 837
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 30/54 (55%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
+++G LD T+E LRQ FS YGEI V K C FV F N I AI G+
Sbjct: 507 VYIGNLDETWTEERLRQDFSAYGEIELVNTLREKSCAFVNFTNIANAIKAIEGM 560
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 41 GAPGQGPQS-----EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGF 95
G P Q P S + ++ +++G L +VT+E+LR+ ++G I +VK+ K GF
Sbjct: 260 GKPSQVPTSVALAVQQSHASRNVYLGNLHEDVTEEELREELGKFGPIDTVKLVKEKSIGF 319
Query: 96 VQFANSLGQIMAI 108
V F + I A+
Sbjct: 320 VHFLSISNAIKAV 332
>gi|400601557|gb|EJP69200.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 790
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV-GHTME 116
++VG LD T+E LRQ FS+YGEI V K C FV F N I AI + G
Sbjct: 511 VYVGNLDETWTEERLRQDFSEYGEIELVNTLREKSCAFVNFTNIANAIKAIEAIRGRDDY 570
Query: 117 GKFMMVMG 124
KF + G
Sbjct: 571 RKFKVNFG 578
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMA 107
Q G S N +++G L VT+++LR+ ++G I +VK+ K F+ + + I A
Sbjct: 278 QQSGASRN--VYLGNLPEEVTEDELREDLGKFGPIDTVKLVREKSIAFIHYLSIANAIKA 335
Query: 108 I 108
+
Sbjct: 336 V 336
>gi|336469347|gb|EGO57509.1| negative regulator of differentiation 1 [Neurospora tetrasperma
FGSC 2508]
gi|350291017|gb|EGZ72231.1| negative regulator of differentiation 1 [Neurospora tetrasperma
FGSC 2509]
Length = 797
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTME- 116
+++G LD T+E LRQ FS+YGEI V K C FV F N I AI V E
Sbjct: 519 VYIGNLDETWTEERLRQDFSEYGEIELVNTLREKSCAFVNFTNIANAIKAIEAVRSKEEY 578
Query: 117 GKFMMVMG 124
KF + G
Sbjct: 579 RKFKVNFG 586
>gi|324507975|gb|ADY43373.1| Nucleolysin TIAR [Ascaris suum]
Length = 290
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 10/114 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +MNG + R +R AT RK +G Q S + GP NT++++
Sbjct: 89 IEQMNGQWLGRRTIRTNWAT-RKPTGTDGQQSKPELSYDDVFNQTGP------DNTSVYI 141
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF---ANSLGQIMAINGV 111
G ++ +V DEDLR F ++G I V+I +G FV+F ++ I+ +NG
Sbjct: 142 GNVNQSVNDEDLRAAFDKFGRIVEVRIFKTQGFAFVRFDKKDSACNAIVKMNGT 195
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 40 NGAPGQGPQSEGDSS-NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKG 92
N A G Q++ D+S + +F+G L P V ++ L+ F+ +GE++ K+ KG
Sbjct: 14 NWATEPGSQAKVDTSKHFHVFIGDLSPEVDNKALKDAFAPFGEVSDAKVIRDSTTLKSKG 73
Query: 93 CGFVQF 98
GFV +
Sbjct: 74 YGFVSY 79
>gi|315052490|ref|XP_003175619.1| differentiation 1 negative regulator [Arthroderma gypseum CBS
118893]
gi|311340934|gb|EFR00137.1| differentiation 1 negative regulator [Arthroderma gypseum CBS
118893]
Length = 839
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 30/54 (55%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
+++G LD T+E LRQ FS YGEI V K C FV F N I AI G+
Sbjct: 509 VYIGNLDETWTEERLRQDFSAYGEIELVNTLREKSCAFVNFTNIANAIKAIEGM 562
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 41 GAPGQGPQS-----EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGF 95
G P Q P S + ++ +++G L +VT+E+LR+ ++G I +VK+ K GF
Sbjct: 262 GKPSQVPTSVALAVQQSHASRNVYLGNLHEDVTEEELREELGKFGPIDTVKLVKEKSIGF 321
Query: 96 VQFANSLGQIMAI 108
V F + I A+
Sbjct: 322 VHFLSISNAIKAV 334
>gi|85084632|ref|XP_957350.1| negative regulator of differentiation 1 [Neurospora crassa OR74A]
gi|28918440|gb|EAA28114.1| negative regulator of differentiation 1 [Neurospora crassa OR74A]
Length = 798
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTME- 116
+++G LD T+E LRQ FS+YGEI V K C FV F N I AI V E
Sbjct: 520 VYIGNLDETWTEERLRQDFSEYGEIELVNTLREKSCAFVNFTNIANAIKAIEAVRSKEEY 579
Query: 117 GKFMMVMG 124
KF + G
Sbjct: 580 RKFKVNFG 587
>gi|432878644|ref|XP_004073359.1| PREDICTED: pre-mRNA-splicing factor RBM22-like [Oryzias latipes]
Length = 426
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMA 107
D S TT+++GGL NVTD DL+ F Q+GEI ++ + + C F+QFA MA
Sbjct: 228 DKSITTLYIGGLGDNVTDGDLKGHFYQFGEIRTITVVQRQQCAFIQFATRQAAEMA 283
>gi|326474591|gb|EGD98600.1| nrd1 [Trichophyton tonsurans CBS 112818]
Length = 837
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 30/54 (55%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
+++G LD T+E LRQ FS YGEI V K C FV F N I AI G+
Sbjct: 507 VYIGNLDETWTEERLRQDFSAYGEIELVNTLREKSCAFVNFTNIANAIKAIEGM 560
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 41 GAPGQGPQS-----EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGF 95
G P Q P S + ++ +++G L +VT+E+LR+ ++G I +VK+ K GF
Sbjct: 260 GKPSQVPTSVVLAVQQSHASRNVYLGNLHEDVTEEELREELGKFGPIDTVKLVKEKSIGF 319
Query: 96 VQFANSLGQIMAI 108
V F + I A+
Sbjct: 320 VHFLSISNAIKAV 332
>gi|222624283|gb|EEE58415.1| hypothetical protein OsJ_09609 [Oryza sativa Japonica Group]
Length = 261
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 27/31 (87%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQY 31
MTEMNG+YCS+RPMRI AA P+K++G Q QY
Sbjct: 88 MTEMNGMYCSTRPMRISAAIPKKTTGSQLQY 118
>gi|326478203|gb|EGE02213.1| differentiation 1 negative regulator [Trichophyton equinum CBS
127.97]
Length = 837
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 30/54 (55%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
+++G LD T+E LRQ FS YGEI V K C FV F N I AI G+
Sbjct: 507 VYIGNLDETWTEERLRQDFSAYGEIELVNTLREKSCAFVNFTNIANAIKAIEGM 560
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 41 GAPGQGPQS-----EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGF 95
G P Q P S + ++ +++G L +VT+E+LR+ ++G I +VK+ K GF
Sbjct: 260 GKPSQVPTSVVLAVQQSHASRNVYLGNLHEDVTEEELREELGKFGPIDTVKLVKEKSIGF 319
Query: 96 VQFANSLGQIMAI 108
V F + I A+
Sbjct: 320 VHFLSISNAIKAV 332
>gi|336268830|ref|XP_003349177.1| hypothetical protein SMAC_08880 [Sordaria macrospora k-hell]
gi|380087339|emb|CCC05386.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 813
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTME- 116
+++G LD T+E LRQ FS+YGEI V K C FV F N I AI V E
Sbjct: 524 VYIGNLDETWTEERLRQDFSEYGEIELVNTLREKSCAFVNFTNIANAIKAIEAVRSKEEY 583
Query: 117 GKFMMVMG 124
KF + G
Sbjct: 584 RKFKVNFG 591
>gi|410913889|ref|XP_003970421.1| PREDICTED: pre-mRNA-splicing factor RBM22-like [Takifugu rubripes]
Length = 426
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMA 107
D + TT+++GGL NVTD DL+ F Q+GEI ++ I + C F+QFA MA
Sbjct: 228 DKTITTLYIGGLGDNVTDGDLKNFFYQFGEIRTITIVQRQQCAFIQFATRQAAEMA 283
>gi|255948266|ref|XP_002564900.1| Pc22g08880 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591917|emb|CAP98176.1| Pc22g08880 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 825
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 31/55 (56%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
+++G LD T+E LRQ FS+YGEI V K C FV F N I AI G+
Sbjct: 504 NVYIGNLDEAWTEERLRQDFSEYGEIELVNTLREKSCAFVNFTNIANAIKAIEGM 558
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 9/65 (13%)
Query: 41 GAPGQGP-------QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
G P Q P Q G S N +++G L +++DLR+ ++G I +VKI K
Sbjct: 258 GKPSQVPTSVALAVQQSGASRN--VYLGNLPEETSEDDLREDLGKFGPIDTVKIVKEKAI 315
Query: 94 GFVQF 98
GFV F
Sbjct: 316 GFVHF 320
>gi|358333735|dbj|GAA52209.1| U2-associated protein SR140 [Clonorchis sinensis]
Length = 1340
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 25/123 (20%)
Query: 26 GYQQQYSSQGGYASNGAPGQGPQS--------------EGDSSNTTIFVGGLDPNVTDED 71
G+ QQ S G +G+P +GD + T +F+G L+P +T++
Sbjct: 245 GFTQQSSGVGLLGDSGSPSNIYGRRGQRDRRDDYPYDFDGDRTTTNLFLGNLNPKMTEQQ 304
Query: 72 LRQPFSQYGEIASVKI---------PVGKGCGFVQFANSLGQIMAINGV-GHTMEGKFMM 121
L + F +YG +ASVKI G+ CGFV F N A++ + G + G F M
Sbjct: 305 LCEAFGRYGPLASVKIMWPRTDEERSRGRNCGFVAFMNRKDGERALDNIRGKELMG-FEM 363
Query: 122 VMG 124
+G
Sbjct: 364 KLG 366
>gi|255732850|ref|XP_002551348.1| predicted protein [Candida tropicalis MYA-3404]
gi|240131089|gb|EER30650.1| predicted protein [Candida tropicalis MYA-3404]
Length = 810
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 31/48 (64%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D +NTT+FVGGL V + L F +G I VKIP GK CGFV+++
Sbjct: 445 DPNNTTVFVGGLSSEVNEPTLYTLFKPFGMIQQVKIPPGKNCGFVKYS 492
>gi|322697191|gb|EFY88974.1| negative regulator of differentiation 1 [Metarhizium acridum CQMa
102]
Length = 798
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV-GHTME 116
++VG LD T++ LRQ FS+YGEI V K C FV F N I AI + G
Sbjct: 517 VYVGNLDETWTEDRLRQDFSEYGEIELVNTLREKSCAFVNFTNIANAIKAIEAIRGRDEY 576
Query: 117 GKFMMVMG 124
KF + G
Sbjct: 577 KKFKINFG 584
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 41 GAPGQGPQS-----EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGF 95
G P Q P S + ++ +++G L +V+DE+LR+ ++G I +VKI K F
Sbjct: 270 GKPSQVPNSVALAVQQSGASRNVYLGNLPEDVSDEELREDLGKFGAIDTVKIVREKNIAF 329
Query: 96 VQFANSLGQIMAI 108
V + + I A+
Sbjct: 330 VHYLSIANAIKAV 342
>gi|345569205|gb|EGX52073.1| hypothetical protein AOL_s00043g463 [Arthrobotrys oligospora ATCC
24927]
Length = 687
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV-GHTME 116
+++G LD T+E LRQ FS+YGEI V K C FV F N I AI + G
Sbjct: 457 VYIGNLDETWTEERLRQDFSEYGEIELVNTLREKSCAFVNFTNIANAIKAIEAIRGKEDY 516
Query: 117 GKFMMVMG 124
KF + G
Sbjct: 517 RKFKINFG 524
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 9/75 (12%)
Query: 41 GAPGQGP-------QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
G P Q P Q G S N +++G L ++ +E+LR ++G I +VK+ K
Sbjct: 210 GKPSQVPTSVALAVQQSGASRN--VYLGNLPEDIGEEELRTELGKFGAIDTVKLVREKNI 267
Query: 94 GFVQFANSLGQIMAI 108
GFV F + I A+
Sbjct: 268 GFVHFLSIGNAIKAV 282
>gi|126341354|ref|XP_001368859.1| PREDICTED: u2 snRNP-associated SURP motif-containing protein-like
[Monodelphis domestica]
Length = 984
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 51/116 (43%), Gaps = 21/116 (18%)
Query: 30 QYSSQGGYASNGAPGQ------------GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS 77
Q S G + S AP Q G GD S T +++G ++P V +E L Q F
Sbjct: 194 QSHSDGQHHSMDAPSQRNISSVPDDYAPGSHDVGDPSTTNLYLGNINPQVNEEMLCQEFG 253
Query: 78 QYGEIASVKI---------PVGKGCGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
++G +ASVKI + CGFV F N + A+ + M F M +G
Sbjct: 254 RFGPLASVKIMWPRTDQERGRKRNCGFVAFMNRIDAERALKNLHGKMIMSFEMKLG 309
>gi|432952652|ref|XP_004085179.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like [Oryzias
latipes]
Length = 240
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 51/102 (50%), Gaps = 7/102 (6%)
Query: 45 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI----PVGK--GCGFVQF 98
Q +SE IFVGGL ++ ++DL FSQYGE+ + +I GK G GFV F
Sbjct: 86 QTDESEARDKVKKIFVGGLKNDIQEDDLTDYFSQYGEVENSEIMSEKTTGKKRGFGFVHF 145
Query: 99 ANSLGQIMAINGVGHTMEGKFMMVMGMLFRHQMTQ-ACTLQQ 139
+ MA+ HT+ G + V + + +M C+ QQ
Sbjct: 146 TDDYAADMAVAVPFHTVNGHRVEVKKAVPKQEMQAGGCSDQQ 187
>gi|253723319|pdb|2YTC|A Chain A, Solution Structure Of Rna Binding Domain In Pre-Mrna-
Splicing Factor Rbm22
Length = 85
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 6/61 (9%)
Query: 39 SNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF 98
S+G+ G+ D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QF
Sbjct: 2 SSGSSGE------DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQF 55
Query: 99 A 99
A
Sbjct: 56 A 56
>gi|297822673|ref|XP_002879219.1| hypothetical protein ARALYDRAFT_344719 [Arabidopsis lyrata subsp.
lyrata]
gi|297325058|gb|EFH55478.1| hypothetical protein ARALYDRAFT_344719 [Arabidopsis lyrata subsp.
lyrata]
Length = 464
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF--------- 98
+S D S T++VGGL+ V ++D+R F YGEI S++I K C FV +
Sbjct: 220 ESPEDQSIKTLYVGGLNSRVLEQDIRDQFYAYGEIESIRILAEKACAFVTYTTREGAEKA 279
Query: 99 ANSLGQIMAING 110
A L + +NG
Sbjct: 280 AEELSNRLVVNG 291
>gi|115471551|ref|NP_001059374.1| Os07g0281000 [Oryza sativa Japonica Group]
gi|75325391|sp|Q6Z358.1|C3H49_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 49;
Short=OsC3H49
gi|34394813|dbj|BAC84225.1| RRM-containing RNA-binding protein-like [Oryza sativa Japonica
Group]
gi|113610910|dbj|BAF21288.1| Os07g0281000 [Oryza sativa Japonica Group]
gi|222636833|gb|EEE66965.1| hypothetical protein OsJ_23846 [Oryza sativa Japonica Group]
Length = 486
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 9/69 (13%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF---------ANSL 102
D S T+++GGLD VT++DLR F +GEI ++++ + + C FV + A L
Sbjct: 224 DESIRTLYIGGLDSRVTEQDLRDQFYAHGEIETIRMVLQRACAFVTYTTREGAEKAAEEL 283
Query: 103 GQIMAINGV 111
+ I GV
Sbjct: 284 ANKLVIKGV 292
>gi|402587661|gb|EJW81596.1| nucleolysin TIAR [Wuchereria bancrofti]
Length = 440
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +MNG + R +R AT RK +G + G Y + ++ NT+++V
Sbjct: 239 IEQMNGQWLGRRTIRTNWAT-RKPTGTG---AGDGQYGRSELNYDDVYNQTGPDNTSVYV 294
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF 98
G ++ N DEDLR F ++G I V+I +G FV+F
Sbjct: 295 GNVNSNANDEDLRAAFDKFGRILEVRIFKSQGYAFVRF 332
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 40 NGAPGQGPQSEGDSS-NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKG 92
N A G Q++ D+S + +FVG L P V ++ L+ F+ +GE++ K+ KG
Sbjct: 164 NWATEPGSQAKVDTSKHFHVFVGDLSPEVDNKALKDAFAPFGEVSDAKVIRDATTLKSKG 223
Query: 93 CGFVQF 98
GFV +
Sbjct: 224 YGFVSY 229
>gi|302903184|ref|XP_003048803.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729737|gb|EEU43090.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 787
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV-GHTME 116
+++G LD T+E LRQ FS+YGEI V K C FV F N I AI + G
Sbjct: 513 VYIGNLDETWTEERLRQDFSEYGEIELVNTLREKSCAFVNFTNIANAIKAIEAIRGREEY 572
Query: 117 GKFMMVMG 124
KF + G
Sbjct: 573 KKFKVNFG 580
Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 9/75 (12%)
Query: 41 GAPGQGP-------QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
G P Q P Q G S N +++G L V+DE+LR+ ++G I ++K+ K
Sbjct: 266 GKPSQVPTSVALAVQQSGASRN--VYLGNLPEEVSDEELREDLGKFGAIDTIKVVREKNI 323
Query: 94 GFVQFANSLGQIMAI 108
FV + + I A+
Sbjct: 324 AFVHYLSIANAIKAV 338
>gi|389632551|ref|XP_003713928.1| differentiation regulator [Magnaporthe oryzae 70-15]
gi|351646261|gb|EHA54121.1| differentiation regulator [Magnaporthe oryzae 70-15]
gi|440473224|gb|ELQ42039.1| hypothetical protein OOU_Y34scaffold00240g46 [Magnaporthe oryzae
Y34]
gi|440480235|gb|ELQ60910.1| hypothetical protein OOW_P131scaffold01214g26 [Magnaporthe oryzae
P131]
Length = 806
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 30/54 (55%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
+++G LD T+E LRQ FS+YGEI V K C FV F N I AI V
Sbjct: 524 VYIGNLDETWTEERLRQDFSEYGEIELVNTLREKSCAFVNFTNIANAIKAIEAV 577
>gi|260830806|ref|XP_002610351.1| hypothetical protein BRAFLDRAFT_145268 [Branchiostoma floridae]
gi|229295716|gb|EEN66361.1| hypothetical protein BRAFLDRAFT_145268 [Branchiostoma floridae]
Length = 435
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMA 107
D S TT+++GGL +T++DLR F Q+GEI S+ + + C F+QF + MA
Sbjct: 228 DRSITTLYIGGLGDKITEQDLRDHFYQFGEIRSITMVARQQCAFIQFTSRPAAEMA 283
>gi|224142105|ref|XP_002324399.1| predicted protein [Populus trichocarpa]
gi|222865833|gb|EEF02964.1| predicted protein [Populus trichocarpa]
Length = 353
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-----PVGKGCGFVQFANSLGQIMA 107
+ +I++GGL N +++ LR+ F+ YG I +VKI GK GFV F N I A
Sbjct: 4 DDDRSIYIGGLPYNASEDTLRRVFNLYGSIVAVKIINNHGTSGKCYGFVTFRNPRSVIDA 63
Query: 108 INGV-GHTMEGKFMMVMGMLFR 128
IN + G T++G+ + V G+ R
Sbjct: 64 INDMNGKTIDGRVVRVNGVTSR 85
>gi|432877061|ref|XP_004073087.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like [Oryzias
latipes]
Length = 300
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
Query: 45 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI----PVGK--GCGFVQF 98
Q +SE + IFVGGL ++ ++DL FSQYGE+ + +I GK G GFV F
Sbjct: 86 QADESEARAKVKKIFVGGLKNDIQEDDLTDYFSQYGEVENSEIMSEKDTGKKRGFGFVHF 145
Query: 99 ANSLGQIMAINGVGHTMEGKFMMVMGMLFRHQMTQACTLQQLRP 142
+ MA+ HT+ G + V + + +M QA + ++ P
Sbjct: 146 TDHYAADMAVAVPFHTVNGHRVEVKKSVPKQEM-QAPSRIRMTP 188
>gi|378733654|gb|EHY60113.1| hypothetical protein HMPREF1120_08085 [Exophiala dermatitidis
NIH/UT8656]
Length = 858
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 34/65 (52%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEG 117
+++G LD + ++E LRQ FS+YGEI V K C FV F N I AI V E
Sbjct: 515 VYIGNLDESWSEERLRQDFSEYGEIELVNTLREKSCAFVNFTNIANAIKAIEAVRQKEEY 574
Query: 118 KFMMV 122
K +
Sbjct: 575 KRFKI 579
>gi|37681959|gb|AAQ97857.1| TIA1 cytotoxic granule-associated RNA binding protein [Danio rerio]
gi|160773363|gb|AAI55270.1| Cytotoxic granule-associated RNA binding protein 1, like [Danio
rerio]
Length = 342
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 10/122 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +MNG + R +R AT RK S + S+ G +S + ++ SN T++
Sbjct: 155 IQQMNGQWLGGRQIRTNWAT-RKPSAPK---SNNEGASSKHLSYEEVLNQSSPSNCTVYC 210
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLG---QIMAINGV---GHT 114
GG+ ++D+ +RQ FS +G+I +++ KG FV+F + G I+++NG GHT
Sbjct: 211 GGIASGLSDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFDSHEGAAHAIVSVNGTCIEGHT 270
Query: 115 ME 116
++
Sbjct: 271 VK 272
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P ++ +D+R F+ +G+I+ ++ KG
Sbjct: 81 NWASTPSSQKKDTSNHFHVFVGDLSPEISTDDVRAAFAPFGKISDARVVRDLATGKSKGY 140
Query: 94 GFVQFANSLGQIMAI 108
GF+ F N AI
Sbjct: 141 GFISFINKWDAESAI 155
>gi|296815382|ref|XP_002848028.1| RNA-binding protein Nrd1 [Arthroderma otae CBS 113480]
gi|238841053|gb|EEQ30715.1| RNA-binding protein Nrd1 [Arthroderma otae CBS 113480]
Length = 838
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 30/54 (55%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
+++G LD T+E LRQ FS YGEI V K C FV F N I AI G+
Sbjct: 507 VYIGNLDETWTEERLRQDFSAYGEIELVNALREKSCAFVNFTNIANAIKAIEGM 560
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 41 GAPGQGP-------QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
G P Q P Q G S N +++G L +VT+E+LR+ ++G I +VK+ K
Sbjct: 260 GKPSQVPTSVALAVQQSGASRN--VYLGNLHEDVTEEELREELGKFGPIDTVKLVKEKSI 317
Query: 94 GFVQFANSLGQIMAI 108
GFV F + I A+
Sbjct: 318 GFVHFLSISNAIKAV 332
>gi|449443125|ref|XP_004139331.1| PREDICTED: uncharacterized protein LOC101205569 [Cucumis sativus]
Length = 346
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-----PVGKGCGFVQFANSLGQIMA 107
+++I+VGGL + T++ LR+ F YG + +VKI GK GFV F N I A
Sbjct: 4 DDDSSIYVGGLPYDATEDSLRRIFDLYGAVVAVKIINDRSTRGKCYGFVTFTNPRSAIDA 63
Query: 108 INGV-GHTMEGKFMMVMGMLFR 128
I + G T+EG+ + V G+ R
Sbjct: 64 IKDMDGRTIEGRVVRVNGVKSR 85
>gi|169769412|ref|XP_001819176.1| negative regulator of differentiation 1 [Aspergillus oryzae RIB40]
gi|83767034|dbj|BAE57174.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 836
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEG 117
++VG LD + ++E LRQ FS+YGEI V K C FV F N I A G+ + E
Sbjct: 509 VYVGNLDESWSEERLRQDFSEYGEIELVNTLREKSCAFVNFTNIANAIKATEGMRNREEY 568
Query: 118 KFMMV 122
K +
Sbjct: 569 KRFKI 573
Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 9/65 (13%)
Query: 41 GAPGQGP-------QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
G P Q P Q G S N +++G L +T+++LR+ ++G I +VKI K
Sbjct: 262 GKPSQVPTSVALAVQQSGASRN--VYLGNLPEEMTEDELREELGKFGPIDTVKIVKEKAI 319
Query: 94 GFVQF 98
GFV F
Sbjct: 320 GFVHF 324
>gi|212533119|ref|XP_002146716.1| RNP domain protein [Talaromyces marneffei ATCC 18224]
gi|210072080|gb|EEA26169.1| RNP domain protein [Talaromyces marneffei ATCC 18224]
Length = 371
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANSLG 103
E D ++ +FVG L VTD+ L++ FS+Y I ++ +G GF+ F++
Sbjct: 233 EWDPAHFRLFVGNLAGEVTDDSLKKAFSKYPSIQKARVIRDKRTEKSRGYGFISFSDGDD 292
Query: 104 QIMAINGVGHTMEGKFMMVMGMLFRHQMTQACTLQQLRPM 143
A G M+GK++ +L R MT+ +Q R M
Sbjct: 293 YFKA----GREMQGKYIGSHPILLRRAMTEVRPVQDRRDM 328
>gi|171686830|ref|XP_001908356.1| hypothetical protein [Podospora anserina S mat+]
gi|170943376|emb|CAP69029.1| unnamed protein product [Podospora anserina S mat+]
Length = 753
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV-GHTME 116
++VG LD T++ LRQ FS+YGEI V K C FV F N I AI V G
Sbjct: 530 VYVGNLDETWTEDRLRQDFSEYGEIELVNTLREKSCAFVNFTNIANAIKAIEAVRGKEEY 589
Query: 117 GKFMMVMG 124
KF + G
Sbjct: 590 RKFKVNFG 597
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Query: 41 GAPGQGP-------QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
G P Q P Q G S N +++G L ++++E+LR+ ++G I ++KI K
Sbjct: 283 GKPSQVPTSVHLAVQQSGASRN--VYLGNLPEDISEEELREDLGKFGAIDTIKIVREKNI 340
Query: 94 GFVQFANSLGQIMAIN 109
FV F + I A++
Sbjct: 341 AFVHFLSIANAIKAVS 356
>gi|41055734|ref|NP_956476.1| TIA1 cytotoxic granule-associated RNA binding protein 1 [Danio
rerio]
gi|28277744|gb|AAH45485.1| Cytotoxic granule-associated RNA binding protein 1, like [Danio
rerio]
gi|44890544|gb|AAH66734.1| Cytotoxic granule-associated RNA binding protein 1, like [Danio
rerio]
Length = 342
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 10/122 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +MNG + R +R AT RK S + S+ G +S + ++ SN T++
Sbjct: 155 IQQMNGQWLGGRQIRTNWAT-RKPSAPK---SNNEGASSKHLSYEEVLNQSSPSNCTVYC 210
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLG---QIMAINGV---GHT 114
GG+ ++D+ +RQ FS +G+I +++ KG FV+F + G I+++NG GHT
Sbjct: 211 GGIASGLSDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFDSHEGAAHAIVSVNGTCIEGHT 270
Query: 115 ME 116
++
Sbjct: 271 VK 272
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P ++ +D+R F+ +G+I+ ++ KG
Sbjct: 81 NWASTPSSQKKDTSNHFHVFVGDLSPEISTDDVRAAFAPFGKISDARVVKDLATGKSKGY 140
Query: 94 GFVQFANSLGQIMAI 108
GF+ F N AI
Sbjct: 141 GFISFINKWDAESAI 155
>gi|116191983|ref|XP_001221804.1| hypothetical protein CHGG_05709 [Chaetomium globosum CBS 148.51]
gi|88181622|gb|EAQ89090.1| hypothetical protein CHGG_05709 [Chaetomium globosum CBS 148.51]
Length = 798
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV-GHTME 116
+++G LD T+E LRQ FS+YGEI V K C FV F N I AI V G
Sbjct: 516 VYIGNLDETWTEERLRQDFSEYGEIELVNALREKSCAFVNFTNIANAIKAIEAVRGKDEY 575
Query: 117 GKFMMVMG 124
KF + G
Sbjct: 576 RKFKVNFG 583
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 41 GAPGQGP-------QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
G P Q P Q G S N +++G L ++TDE+LR+ ++G I +VKI K
Sbjct: 269 GKPSQVPTSVALAVQQSGASRN--VYLGNLPEDITDEELREDLGKFGAIDTVKIVREKNI 326
Query: 94 GFVQFANSLGQIMAI 108
FV F + I A+
Sbjct: 327 AFVHFLSIANAIKAV 341
>gi|391332510|ref|XP_003740677.1| PREDICTED: nucleolysin TIAR-like [Metaseiulus occidentalis]
Length = 341
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 56/120 (46%), Gaps = 9/120 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGP------QSEGDSS 54
+ MNG + R +R AT R +S Q Q G N P P ++ +
Sbjct: 106 INAMNGQWLGGRVIRTNWATRRPASNANNQ---QEGSQGNSTPKYTPLTFDEVYNQASPT 162
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHT 114
N T++ GGL +++E +++ FS YG I +++ KG FV+FA AI V +T
Sbjct: 163 NCTVYCGGLGQGLSEELIQKTFSSYGIIQEIRVFKDKGYAFVRFATKESATHAIVAVHNT 222
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 10/69 (14%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANSLGQIMAINGV 111
IFVG L +V + LR+ F+ +GEI+ ++ KG GFV F AIN
Sbjct: 50 IFVGDLSSDVETQQLREAFTPFGEISDCRVVRDPQTQKSKGYGFVSFLRKQDAETAINA- 108
Query: 112 GHTMEGKFM 120
M G+++
Sbjct: 109 ---MNGQWL 114
>gi|347840152|emb|CCD54724.1| similar to differentiation regulator (Nrd1) [Botryotinia
fuckeliana]
Length = 823
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 31/55 (56%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
+++G LD + T+E LRQ FS+YGEI V K C FV F N I AI +
Sbjct: 511 NVYIGNLDESWTEERLRQDFSEYGEIELVNTLREKSCAFVNFTNIANAIKAIEAI 565
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 41 GAPGQGP-------QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
G P Q P Q G S N +++G L VT+++LR+ ++G I +VKI K
Sbjct: 265 GKPSQVPTSVALAVQQSGASRN--VYLGNLGEEVTEDELREDLGKFGPIDTVKIVREKAI 322
Query: 94 GFVQFANSLGQIMAI 108
GFV F + I A+
Sbjct: 323 GFVHFLSIGNAIKAV 337
>gi|15231783|ref|NP_188026.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|9294635|dbj|BAB02974.1| RNA binding protein nucleolysin; oligouridylate binding protein
[Arabidopsis thaliana]
gi|22655004|gb|AAM98093.1| AT3g14100/MAG2_5 [Arabidopsis thaliana]
gi|28416511|gb|AAO42786.1| AT3g14100/MAG2_5 [Arabidopsis thaliana]
gi|332641947|gb|AEE75468.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 427
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 58/119 (48%), Gaps = 12/119 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYA---SNGAPGQGPQS------EG 51
+ EMNG + SSR +R AT +SG + SS G + G+ G ++ E
Sbjct: 202 INEMNGKWLSSRQIRCNWATKGATSG-DDKLSSDGKSVVELTTGSSEDGKETLNEETPEN 260
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGE--IASVKIPVGKGCGFVQFANSLGQIMAI 108
+S TT++VG L P VT DL + F G I V++ KG GFV++ +AI
Sbjct: 261 NSQFTTVYVGNLAPEVTQLDLHRYFHALGAGVIEEVRVQRDKGFGFVRYNTHPEAALAI 319
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANS 101
Q E SS+ IFVG L P VTD L Q FS + + ++ +G GFV F N
Sbjct: 136 QREDTSSHFNIFVGDLSPEVTDATLYQSFSVFSSCSDARVMWDQKTGRSRGFGFVSFRNQ 195
Query: 102 LGQIMAINGVGHTMEGKFM 120
AIN M GK++
Sbjct: 196 QDAQTAIN----EMNGKWL 210
>gi|156033281|ref|XP_001585477.1| hypothetical protein SS1G_13716 [Sclerotinia sclerotiorum 1980]
gi|154699119|gb|EDN98857.1| hypothetical protein SS1G_13716 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 775
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 31/55 (56%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
+++G LD + T+E LRQ FS+YGEI V K C FV F N I AI +
Sbjct: 467 NVYIGNLDESWTEERLRQDFSEYGEIELVNTLREKSCAFVNFTNIANAIKAIEAI 521
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 41 GAPGQGP-------QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
G P Q P Q G S N +++G L VT+++LR+ ++G I +VKI K
Sbjct: 221 GKPSQVPTSVALAVQQSGASRN--VYLGNLGEEVTEDELREDLGKFGPIDTVKIVREKAI 278
Query: 94 GFVQFANSLGQIMAI 108
GFV F + I A+
Sbjct: 279 GFVHFLSIGNAIKAV 293
>gi|310793038|gb|EFQ28499.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 791
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 33/65 (50%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEG 117
+++G LD T+E L+Q FS+YGEI V K C FV F N I AI V E
Sbjct: 519 VYIGNLDETWTEERLKQDFSEYGEIELVNTLREKSCAFVNFTNIANAIKAIEAVRSKDEY 578
Query: 118 KFMMV 122
K V
Sbjct: 579 KKFKV 583
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Query: 41 GAPGQGP-------QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
G P Q P Q G S N +++G L +VT+E+LR+ ++G I ++K+ K
Sbjct: 272 GKPSQVPTSVALAVQQAGASRN--VYLGNLPEDVTEEELREDLGKFGAIDTIKLVREKSI 329
Query: 94 GFVQFANSLGQIMAIN 109
F+ F + + A+N
Sbjct: 330 AFIHFLSIANAVKAVN 345
>gi|154294096|ref|XP_001547491.1| hypothetical protein BC1G_14118 [Botryotinia fuckeliana B05.10]
Length = 758
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 31/55 (56%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
+++G LD + T+E LRQ FS+YGEI V K C FV F N I AI +
Sbjct: 446 NVYIGNLDESWTEERLRQDFSEYGEIELVNTLREKSCAFVNFTNIANAIKAIEAI 500
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 41 GAPGQGP-------QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
G P Q P Q G S N +++G L VT+++LR+ ++G I +VKI K
Sbjct: 200 GKPSQVPTSVALAVQQSGASRN--VYLGNLGEEVTEDELREDLGKFGPIDTVKIVREKAI 257
Query: 94 GFVQFANSLGQIMAI 108
GFV F + I A+
Sbjct: 258 GFVHFLSIGNAIKAV 272
>gi|212532905|ref|XP_002146609.1| differentiation regulator (Nrd1), putative [Talaromyces marneffei
ATCC 18224]
gi|210071973|gb|EEA26062.1| differentiation regulator (Nrd1), putative [Talaromyces marneffei
ATCC 18224]
Length = 836
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 33/65 (50%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEG 117
+++G LD T+E LRQ FS+YGEI V K C FV F N I AI + E
Sbjct: 515 VYIGNLDETWTEERLRQDFSEYGEIELVNTLREKSCAFVNFTNIANAIKAIEAMRSREEY 574
Query: 118 KFMMV 122
K +
Sbjct: 575 KRFKI 579
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 41 GAPGQGP-------QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
G P Q P Q G S N +++G L ++T+E+LR+ ++G I +VK+ K
Sbjct: 268 GKPSQVPTSVAVAVQQSGASRN--VYLGSLPEDITEEELREELGKFGPIDTVKLVKEKAI 325
Query: 94 GFVQFANSLGQIMAI 108
GFV F + I A+
Sbjct: 326 GFVHFLSISNAIKAV 340
>gi|21593280|gb|AAM65229.1| oligouridylate binding protein, putative [Arabidopsis thaliana]
Length = 427
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 58/119 (48%), Gaps = 12/119 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYA---SNGAPGQGPQS------EG 51
+ EMNG + SSR +R AT +SG + SS G + G+ G ++ E
Sbjct: 202 INEMNGKWLSSRQIRCNWATKGATSG-DDKLSSDGKSVVELTTGSSEDGKETLNEETPEN 260
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGE--IASVKIPVGKGCGFVQFANSLGQIMAI 108
+S TT++VG L P VT DL + F G I V++ KG GFV++ +AI
Sbjct: 261 NSQFTTVYVGNLAPEVTQLDLHRYFHALGAGVIEEVRVQRDKGFGFVRYNTHPEAALAI 319
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANS 101
Q E SS+ IFVG L P VTD L Q FS + + ++ +G GFV F N
Sbjct: 136 QREDTSSHFNIFVGDLSPEVTDATLYQSFSVFSSCSDARVMWDQKTGRSRGFGFVSFRNQ 195
Query: 102 LGQIMAINGVGHTMEGKFM 120
AIN M GK++
Sbjct: 196 QDAQTAIN----EMNGKWL 210
>gi|322709394|gb|EFZ00970.1| negative regulator of differentiation 1 [Metarhizium anisopliae
ARSEF 23]
Length = 798
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV-GHTM 115
+++G LD T++ LRQ FS+YGEI V K C FV F N I AI + G
Sbjct: 516 NVYIGNLDETWTEDRLRQDFSEYGEIELVNTLREKSCAFVNFTNIANAIKAIEAIRGRDE 575
Query: 116 EGKFMMVMG 124
KF + G
Sbjct: 576 YKKFKVNFG 584
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 41 GAPGQGPQS-----EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGF 95
G P Q P S + ++ +++G L +V+DE+LR+ ++G I +VKI K F
Sbjct: 270 GKPSQVPNSVALAVQQSGASRNVYLGNLPEDVSDEELREDLGKFGAIDTVKIVREKNIAF 329
Query: 96 VQFANSLGQIMAI 108
V + + I A+
Sbjct: 330 VHYLSIANAIKAV 342
>gi|290992109|ref|XP_002678677.1| RNA recognition motif domain-containing protein [Naegleria gruberi]
gi|284092290|gb|EFC45933.1| RNA recognition motif domain-containing protein [Naegleria gruberi]
Length = 286
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK-----GCGFVQFANSLGQ 104
E S T+IF+G LD N T+ DLR FS+ GEIASVK+ K F+ FAN
Sbjct: 94 EEKSKATSIFLGSLDSNTTENDLRDAFSKCGEIASVKLGFTKQGHFLRYAFISFANREDT 153
Query: 105 IMAINGV 111
A N V
Sbjct: 154 EKAFNAV 160
>gi|297829972|ref|XP_002882868.1| hypothetical protein ARALYDRAFT_478823 [Arabidopsis lyrata subsp.
lyrata]
gi|297328708|gb|EFH59127.1| hypothetical protein ARALYDRAFT_478823 [Arabidopsis lyrata subsp.
lyrata]
Length = 430
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 58/119 (48%), Gaps = 12/119 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYA---SNGAPGQGPQS------EG 51
+ EMNG + SSR +R AT +SG + SS G + G+ G ++ E
Sbjct: 204 INEMNGKWLSSRQIRCNWATKGATSG-DDKLSSDGKSVVELTTGSSEDGKETLNEEAPEN 262
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGE--IASVKIPVGKGCGFVQFANSLGQIMAI 108
+S TT++VG L P VT DL + F G I V++ KG GFV++ +AI
Sbjct: 263 NSQFTTVYVGNLAPEVTQLDLHRYFHALGAGVIEEVRVQRDKGFGFVRYNTHPEAALAI 321
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANS 101
Q E SS+ IFVG L P VTD L Q FS + + ++ +G GFV F N
Sbjct: 138 QREDTSSHFNIFVGDLSPEVTDATLYQSFSVFSSCSDARVMWDQKTGRSRGFGFVSFRNQ 197
Query: 102 LGQIMAINGVGHTMEGKFM 120
AIN M GK++
Sbjct: 198 QDAQTAIN----EMNGKWL 212
>gi|302690898|ref|XP_003035128.1| hypothetical protein SCHCODRAFT_65804 [Schizophyllum commune H4-8]
gi|300108824|gb|EFJ00226.1| hypothetical protein SCHCODRAFT_65804 [Schizophyllum commune H4-8]
Length = 1161
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
Query: 32 SSQGGYASNGAPGQGPQSEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG 90
++ GG + +P PQS+ + T ++++G LD VT E L F+ YG I S+++
Sbjct: 302 AAPGGQNRSVSPKSEPQSQQAQTPTRSLWIGNLDSAVTSEQLIHHFAPYGAIESLRLLPE 361
Query: 91 KGCGFVQFANSLGQIMAINGVGHTMEGKFMMVMGMLFR 128
K CGFV F + I A + V + + G M G R
Sbjct: 362 KECGFVNFVDQADAIRAKDDVLNRLGGNIGMPNGQTVR 399
>gi|258574095|ref|XP_002541229.1| negative regulator of differentiation 1 [Uncinocarpus reesii 1704]
gi|237901495|gb|EEP75896.1| negative regulator of differentiation 1 [Uncinocarpus reesii 1704]
Length = 940
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV-GHTME 116
+++G LD + T++ LRQ FS YGEI V K C FV F N I AI G+ G
Sbjct: 613 VYIGNLDESWTEDRLRQDFSAYGEIELVNTLREKSCAFVNFTNIANAIKAIEGMRGREEY 672
Query: 117 GKFMMVMG 124
+F + G
Sbjct: 673 KRFKINFG 680
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Query: 41 GAPGQGP-------QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
G P Q P Q G S N +++G L +VT+ +LR+ ++G I ++KI K
Sbjct: 366 GKPSQVPTSVALAVQQSGASRN--VYLGNLAEDVTEAELREELGKFGPIDTIKIVREKSI 423
Query: 94 GFVQFANSLGQIMAIN 109
GFV F + I A+N
Sbjct: 424 GFVHFLSISNAIKAVN 439
>gi|449509482|ref|XP_004163601.1| PREDICTED: uncharacterized LOC101205569 [Cucumis sativus]
Length = 195
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-----PVGKGCGFVQFANSLGQIMA 107
+++I+VGGL + T++ LR+ F YG + +VKI GK GFV F N I A
Sbjct: 4 DDDSSIYVGGLPYDATEDSLRRIFDLYGAVVAVKIINDRSTRGKCYGFVTFTNPRSAIDA 63
Query: 108 INGV-GHTMEGKFMMVMGMLFR 128
I + G T+EG+ + V G+ R
Sbjct: 64 IKDMDGRTIEGRVVRVNGVKSR 85
>gi|296420654|ref|XP_002839884.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636090|emb|CAZ84075.1| unnamed protein product [Tuber melanosporum]
Length = 734
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 31/54 (57%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
++VG LD + ++E LRQ FS+YGEI V K C FV F N I AI V
Sbjct: 452 VYVGNLDESWSEERLRQDFSEYGEIELVNALREKSCAFVNFTNIANAIKAIEAV 505
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 41 GAPGQGP-------QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
G P Q P Q G S N +++G L +V++E+LR+ ++G I +VKI K
Sbjct: 205 GKPSQVPTSVALAVQQSGASRN--VYLGNLPEDVSEEELREDLGKFGPIDTVKIVREKAI 262
Query: 94 GFVQFANSLGQIMAI 108
GFV F + I A+
Sbjct: 263 GFVHFLSIGNAIKAV 277
>gi|238578169|ref|XP_002388626.1| hypothetical protein MPER_12329 [Moniliophthora perniciosa FA553]
gi|215450078|gb|EEB89556.1| hypothetical protein MPER_12329 [Moniliophthora perniciosa FA553]
Length = 529
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 54/116 (46%), Gaps = 12/116 (10%)
Query: 18 AATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNT-----TIFVGGLDPNVTDEDL 72
A TP ++S Y +Q S P++EG SS ++++G LD VT E L
Sbjct: 87 AETPSRASQYLLAPGAQNRSVS-------PKNEGQSSQVQTPTRSLWIGNLDSAVTSEQL 139
Query: 73 RQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGKFMMVMGMLFR 128
F+ YG I S+++ K CGFV F + I A + V + + G M G R
Sbjct: 140 IHVFAPYGAIESLRLLPEKECGFVNFVDQADAIRAKDDVLNRLGGNIGMPNGQTVR 195
>gi|320590244|gb|EFX02687.1| negative regulator of differentiation 1 protein [Grosmannia
clavigera kw1407]
Length = 819
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 30/54 (55%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
+++G LD T+E LRQ FS+YGEI V K C FV F N I AI V
Sbjct: 534 VYIGNLDETWTEERLRQDFSEYGEIELVNTLREKSCAFVNFTNIANAIKAIEAV 587
>gi|396480419|ref|XP_003840992.1| hypothetical protein LEMA_P106440.1 [Leptosphaeria maculans JN3]
gi|312217565|emb|CBX97513.1| hypothetical protein LEMA_P106440.1 [Leptosphaeria maculans JN3]
Length = 831
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 34/65 (52%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEG 117
++VG LD + T++ LRQ FS+YGEI V K C FV F N I AI + E
Sbjct: 513 VYVGNLDESWTEDRLRQDFSEYGEIELVNTLREKSCAFVNFTNIANAIKAIEAIRGREEY 572
Query: 118 KFMMV 122
K V
Sbjct: 573 KRFKV 577
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 9/75 (12%)
Query: 41 GAPGQGP-------QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
G P Q P Q G S N +++G L +VT+++LR+ S++G I +VKI K
Sbjct: 266 GKPSQVPTSVALAVQQSGASRN--VYLGNLSEDVTEDELREDLSKFGPIDTVKIVREKAI 323
Query: 94 GFVQFANSLGQIMAI 108
GFV F + I A+
Sbjct: 324 GFVHFLSIGNAIKAV 338
>gi|15221031|ref|NP_175810.1| oligouridylate-binding protein 1A [Arabidopsis thaliana]
gi|4587549|gb|AAD25780.1|AC006577_16 Similar to gb|U55861 RNA binding protein nucleolysin (TIAR) from
Mus musculus and contains several PF|00076 RNA
recognition motif domains. ESTs gb|T21032 and gb|T44127
come from this gene [Arabidopsis thaliana]
gi|13194792|gb|AAK15558.1|AF348587_1 putative oligouridylate binding protein [Arabidopsis thaliana]
gi|13605627|gb|AAK32807.1|AF361639_1 At1g54080/F15I1_16 [Arabidopsis thaliana]
gi|22137190|gb|AAM91440.1| At1g54080/F15I1_16 [Arabidopsis thaliana]
gi|332194924|gb|AEE33045.1| oligouridylate-binding protein 1A [Arabidopsis thaliana]
Length = 426
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 58/119 (48%), Gaps = 12/119 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYA---SNGAPGQGPQ------SEG 51
+ EMNG + SSR +R AT + G + ++SS G +NG+ G + E
Sbjct: 206 INEMNGKWVSSRQIRCNWATKGATFG-EDKHSSDGKSVVELTNGSSEDGRELSNEDAPEN 264
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGE--IASVKIPVGKGCGFVQFANSLGQIMAI 108
+ TT++VG L P VT DL + F G I V++ KG GFV++ +AI
Sbjct: 265 NPQFTTVYVGNLSPEVTQLDLHRLFYTLGAGVIEEVRVQRDKGFGFVRYNTHDEAALAI 323
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 36/79 (45%), Gaps = 10/79 (12%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANS 101
Q E SS+ IFVG L P VTD L FS + + ++ +G GFV F N
Sbjct: 140 QREDTSSHFNIFVGDLSPEVTDAALFDSFSAFNSCSDARVMWDQKTGRSRGFGFVSFRNQ 199
Query: 102 LGQIMAINGVGHTMEGKFM 120
AIN M GK++
Sbjct: 200 QDAQTAIN----EMNGKWV 214
>gi|242008705|ref|XP_002425142.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212508823|gb|EEB12404.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 849
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 9/59 (15%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFVQFAN 100
GD + T I++G L+P +T++ L + F +YG +AS+KI GK CGFV F N
Sbjct: 178 GDPNTTNIYLGNLNPKITEQQLMELFGRYGPLASIKIMWPRTDEEKARGKNCGFVAFMN 236
>gi|115473341|ref|NP_001060269.1| Os07g0615400 [Oryza sativa Japonica Group]
gi|23237933|dbj|BAC16506.1| putative oligouridylate binding protein [Oryza sativa Japonica
Group]
gi|113611805|dbj|BAF22183.1| Os07g0615400 [Oryza sativa Japonica Group]
gi|215737207|dbj|BAG96136.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767365|dbj|BAG99593.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222637457|gb|EEE67589.1| hypothetical protein OsJ_25126 [Oryza sativa Japonica Group]
Length = 427
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 61/134 (45%), Gaps = 22/134 (16%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQG-------------GYASNGAPGQGP 47
+ ++NG + SR +R AT S+G QQ S+ A+ AP P
Sbjct: 208 INDLNGQWLGSRQIRCNWATKGASNGEQQTSDSKNVADLTNNLTEDGKEKANEDAPENNP 267
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE--IASVKIPVGKGCGFVQFANSLGQI 105
Q T++VG L VT + L + F G I V+I +GKG GFV+++N
Sbjct: 268 QYR------TVYVGNLAHEVTQDVLHRLFHALGAGAIEEVRIQLGKGFGFVRYSNHAEAA 321
Query: 106 MAIN-GVGHTMEGK 118
+AI G G + GK
Sbjct: 322 LAIQMGNGRILGGK 335
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANS 101
Q E + + IFVG L P VTD L FS Y + ++ +G GFV F N
Sbjct: 142 QREDTTDHFNIFVGDLSPEVTDSALFAFFSGYSSCSDARVMWDQKTGRSRGYGFVSFRNQ 201
Query: 102 LGQIMAINGV 111
AIN +
Sbjct: 202 QDAQSAINDL 211
>gi|154286300|ref|XP_001543945.1| hypothetical protein HCAG_00991 [Ajellomyces capsulatus NAm1]
gi|150407586|gb|EDN03127.1| hypothetical protein HCAG_00991 [Ajellomyces capsulatus NAm1]
Length = 637
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 32/66 (48%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTME 116
+++G LD T+E LRQ FS YGEI V K C FV F N I AI + E
Sbjct: 319 NVYIGNLDETWTEERLRQDFSSYGEIELVNALREKSCAFVNFTNIANAIKAIEAMRSREE 378
Query: 117 GKFMMV 122
K +
Sbjct: 379 YKRFKI 384
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 41 GAPGQGP-------QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
G P Q P Q G S N +++G L +VT+E+LR+ ++G I ++KI K
Sbjct: 73 GKPSQVPTSVALAVQQSGASRN--VYLGNLAEDVTEEELREDLGKFGPIDTIKIVKEKSI 130
Query: 94 GFVQFANSLGQIMAI 108
GFV F + I A+
Sbjct: 131 GFVHFLSISNAIKAV 145
>gi|46122133|ref|XP_385620.1| hypothetical protein FG05444.1 [Gibberella zeae PH-1]
Length = 783
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV-GHTME 116
+++G LD T+E LRQ FS+YGEI V K C FV F N I AI + G
Sbjct: 512 VYIGNLDETWTEERLRQDFSEYGEIELVNTLREKSCAFVNFTNIANAIKAIEAIRGREDY 571
Query: 117 GKFMMVMG 124
KF + G
Sbjct: 572 RKFKVNFG 579
>gi|30695647|ref|NP_849806.1| oligouridylate-binding protein 1A [Arabidopsis thaliana]
gi|332194923|gb|AEE33044.1| oligouridylate-binding protein 1A [Arabidopsis thaliana]
Length = 430
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 58/119 (48%), Gaps = 12/119 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYA---SNGAPGQGPQ------SEG 51
+ EMNG + SSR +R AT + G + ++SS G +NG+ G + E
Sbjct: 210 INEMNGKWVSSRQIRCNWATKGATFG-EDKHSSDGKSVVELTNGSSEDGRELSNEDAPEN 268
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGE--IASVKIPVGKGCGFVQFANSLGQIMAI 108
+ TT++VG L P VT DL + F G I V++ KG GFV++ +AI
Sbjct: 269 NPQFTTVYVGNLSPEVTQLDLHRLFYTLGAGVIEEVRVQRDKGFGFVRYNTHDEAALAI 327
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 36/83 (43%), Gaps = 14/83 (16%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASV----------KIPVGKGCGFVQ 97
Q E SS+ IFVG L P VTD L FS + +S K +G GFV
Sbjct: 140 QREDTSSHFNIFVGDLSPEVTDAALFDSFSAFNSCSSYYRDARVMWDQKTGRSRGFGFVS 199
Query: 98 FANSLGQIMAINGVGHTMEGKFM 120
F N AIN M GK++
Sbjct: 200 FRNQQDAQTAIN----EMNGKWV 218
>gi|408397158|gb|EKJ76308.1| hypothetical protein FPSE_03563 [Fusarium pseudograminearum CS3096]
Length = 783
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV-GHTME 116
+++G LD T+E LRQ FS+YGEI V K C FV F N I AI + G
Sbjct: 512 VYIGNLDETWTEERLRQDFSEYGEIELVNTLREKSCAFVNFTNIANAIKAIEAIRGREDY 571
Query: 117 GKFMMVMG 124
KF + G
Sbjct: 572 RKFKVNFG 579
>gi|308804982|ref|XP_003079803.1| RRM-containing RNA-binding protein-like (ISS) [Ostreococcus tauri]
gi|116058260|emb|CAL53449.1| RRM-containing RNA-binding protein-like (ISS) [Ostreococcus tauri]
Length = 380
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 52 DSSNTTIFVGGLDPN-VTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAING 110
D+S TT+F+G +DP V ++D+R F +YG+I S+++ K C F+ F + G A
Sbjct: 227 DTSITTLFIGNVDPERVNEDDIRGRFYRYGDIKSIRVIGNKKCAFITFTSRAGAEKAAED 286
Query: 111 VGHTME 116
+E
Sbjct: 287 AAFNLE 292
>gi|18390760|ref|NP_563788.1| pre-mRNA-splicing factor RBM22/SLT11 [Arabidopsis thaliana]
gi|75335266|sp|Q9LNV5.1|C3H4_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 4;
Short=AtC3H4
gi|8778549|gb|AAF79557.1|AC022464_15 F22G5.30 [Arabidopsis thaliana]
gi|332189993|gb|AEE28114.1| pre-mRNA-splicing factor RBM22/SLT11 [Arabidopsis thaliana]
Length = 481
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF--------- 98
+S D S T++VGGL+ + ++D+R F +GEI S++I K C FV +
Sbjct: 220 ESPDDESIKTLYVGGLNSRILEQDIRDQFYAHGEIESIRILADKACAFVTYTSREGAEKA 279
Query: 99 ANSLGQIMAING 110
A L + ING
Sbjct: 280 AQELSNRLVING 291
>gi|15450878|gb|AAK96710.1| Unknown protein [Arabidopsis thaliana]
gi|21387095|gb|AAM47951.1| unknown protein [Arabidopsis thaliana]
Length = 481
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF--------- 98
+S D S T++VGGL+ + ++D+R F +GEI S++I K C FV +
Sbjct: 220 ESPDDESIKTLYVGGLNSRILEQDIRDQFYAHGEIESIRILADKACAFVTYTSREGAEKA 279
Query: 99 ANSLGQIMAING 110
A L + ING
Sbjct: 280 AQELSNRLVING 291
>gi|332028567|gb|EGI68604.1| RNA-binding protein squid [Acromyrmex echinatior]
Length = 316
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 28 QQQYSSQGGYASNGAPGQGPQSEGDS-SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVK 86
+Q ++ Q G A N ++ +S + +FVGGL TD++LR+ FS YG+I S+
Sbjct: 15 EQNFAEQNGEAENNGENNVAENNQESQEDRKLFVGGLSWETTDKELREHFSAYGDIESIN 74
Query: 87 IPV------GKGCGFVQF--ANSLGQIMA 107
+ +G F+ F A SL +IM+
Sbjct: 75 VKTDPNTGRSRGFAFIVFAKAESLDKIMS 103
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK 91
IFVGGL ++D+D++ FSQ+G I V++P K
Sbjct: 126 IFVGGLSTELSDDDIKNFFSQFGTIVEVEMPFDK 159
>gi|361125046|gb|EHK97106.1| putative RNA-binding protein MRN1 [Glarea lozoyensis 74030]
Length = 750
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 31/55 (56%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
++VG LD + ++E LRQ FS+YGEI V K C FV F N I AI +
Sbjct: 437 NVYVGNLDESWSEERLRQDFSEYGEIELVNTLREKSCAFVNFTNIANAIKAIEAI 491
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 9/75 (12%)
Query: 41 GAPGQGP-------QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
G P Q P Q G S N +++G L+ NVT+++LR S++G I +VKI K
Sbjct: 191 GKPSQVPTSVALAVQQSGASRN--VYLGNLEENVTEDELRDDLSKFGPIDTVKIVREKAI 248
Query: 94 GFVQFANSLGQIMAI 108
GFV F + I A+
Sbjct: 249 GFVHFLSIGNAIKAV 263
>gi|342874810|gb|EGU76729.1| hypothetical protein FOXB_12750 [Fusarium oxysporum Fo5176]
Length = 786
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV-GHTME 116
+++G LD T+E LRQ FS+YGEI V K C FV F N I AI + G
Sbjct: 512 VYIGNLDETWTEERLRQDFSEYGEIELVNTLREKSCAFVNFTNIANAIKAIEAIRGRDDY 571
Query: 117 GKFMMVMG 124
KF + G
Sbjct: 572 RKFKVNFG 579
>gi|358398193|gb|EHK47551.1| hypothetical protein TRIATDRAFT_216568 [Trichoderma atroviride IMI
206040]
Length = 789
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV-GHTME 116
+++G LD T+E LRQ F++YGEI V K C FV F N I AI + G
Sbjct: 514 VYIGNLDETWTEERLRQDFTEYGEIELVNALREKSCAFVNFTNIANAIKAIEAIRGKDEY 573
Query: 117 GKFMMVMG 124
KF + G
Sbjct: 574 KKFKVNFG 581
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 41 GAPGQGP-------QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
G P Q P Q G S N +++G L V+DE+LR+ +++G I ++KI K
Sbjct: 267 GKPSQVPTSVALAVQQSGASRN--VYLGNLPEEVSDEELREDLAKFGAIDTIKIVREKSI 324
Query: 94 GFVQFANSLGQIMAI 108
FV + + I A+
Sbjct: 325 AFVHYLSIANAIKAV 339
>gi|367050842|ref|XP_003655800.1| hypothetical protein THITE_2119901 [Thielavia terrestris NRRL 8126]
gi|347003064|gb|AEO69464.1| hypothetical protein THITE_2119901 [Thielavia terrestris NRRL 8126]
Length = 795
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV-GHTME 116
+++G LD T++ LRQ FS+YGEI V K C FV F N I AI V G
Sbjct: 516 VYIGNLDETWTEDRLRQDFSEYGEIELVNTLREKSCAFVNFTNIANAIKAIEAVRGKEEY 575
Query: 117 GKFMMVMG 124
KF + G
Sbjct: 576 KKFKVNFG 583
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Query: 41 GAPGQGP-------QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
G P Q P Q G S N +++G L ++T+E+LR+ ++G I +VKI K
Sbjct: 269 GKPSQVPTSVALAVQQSGASRN--VYLGNLPEDITEEELREDLGKFGPIDTVKIVREKNI 326
Query: 94 GFVQFANSLGQIMAIN 109
FV F + I A++
Sbjct: 327 AFVHFLSIANAIKAVS 342
>gi|297840659|ref|XP_002888211.1| RNA-binding protein 1 [Arabidopsis lyrata subsp. lyrata]
gi|297334052|gb|EFH64470.1| RNA-binding protein 1 [Arabidopsis lyrata subsp. lyrata]
Length = 359
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 7/88 (7%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYG-----EIASVKIP-VGKGCGFVQFANSLGQI 105
D +FVGG+ ++EDL+Q FS+YG +A K+ + +G GFV+FAN +
Sbjct: 2 DYDRFKLFVGGIGKETSEEDLKQYFSRYGLVLGAVVAKDKVTGISRGFGFVRFANDYDVV 61
Query: 106 MAINGVGHTMEGKFMMVMGMLFRHQMTQ 133
A++G H + GK + V +H++ Q
Sbjct: 62 KALSGT-HFILGKPVDVRKAFRKHELYQ 88
>gi|291231285|ref|XP_002735593.1| PREDICTED: TIA-1 related protein-like [Saccoglossus kowalevskii]
Length = 409
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 10/110 (9%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGL 63
MNG + S R +R AT + Q + + Q Y + +NTT+++GG+
Sbjct: 163 MNGQWLSGRAIRTNWATRKPPPPRQPETTKQLSYDDVC-------NSSSYTNTTVYIGGV 215
Query: 64 DPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF---ANSLGQIMAING 110
+T+ +R+ FS YG I V+I KG F++F ++ I+++NG
Sbjct: 216 TTGLTEGKMRETFSHYGHIQEVRIFPDKGYAFIRFMTHESAAHAIVSVNG 265
Score = 38.5 bits (88), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 8/75 (10%)
Query: 52 DSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANSLGQ 104
D+SN +FVG L V DL+ F+ +G+I+ ++ KG GFV F N +
Sbjct: 97 DTSNHHHVFVGDLSSEVDTPDLKAAFAPFGQISDARVVKDLQTNKSKGYGFVSFLNKVDA 156
Query: 105 IMAINGV-GHTMEGK 118
AI G+ G + G+
Sbjct: 157 ENAIQGMNGQWLSGR 171
>gi|345870843|ref|ZP_08822793.1| RNP-1 like RNA-binding protein [Thiorhodococcus drewsii AZ1]
gi|343921312|gb|EGV32033.1| RNP-1 like RNA-binding protein [Thiorhodococcus drewsii AZ1]
Length = 90
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 7/72 (9%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANSLGQIMAINGV 111
I+VG L +VT+EDLR FS YGEI+S + KG GFV+ +N+ AI G+
Sbjct: 3 IYVGNLAYSVTEEDLRAAFSTYGEISSASLITDKFTGNSKGFGFVEMSNNAEADAAIKGL 62
Query: 112 GHT-MEGKFMMV 122
T ++G+ M V
Sbjct: 63 NETPLKGRNMKV 74
>gi|391328905|ref|XP_003738923.1| PREDICTED: RNA-binding protein squid-like [Metaseiulus
occidentalis]
Length = 299
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 10/100 (10%)
Query: 29 QQYSSQGGYASNGAPGQGPQ----SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIAS 84
+Q Q A+NG G S D+ + +F GGL + TD DLR F +YGEI
Sbjct: 14 EQVEDQKMEATNGDGTDGSNGTTTSTADAEDRKLFCGGLSFDTTDADLRSHFEKYGEIQE 73
Query: 85 VKIPV------GKGCGFVQFANSLGQIMAINGVGHTMEGK 118
+ + +G GF+ F + AI G HT++GK
Sbjct: 74 CTVKMDPMTKKSRGFGFITFGSKQAVEDAIAGAPHTIKGK 113
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANSLGQIMAINGV 111
+F GGL P T+E++R F QYG I ++++PV K G FV + + A+
Sbjct: 129 VFCGGLPPETTEEEIRTYFGQYGNIEALELPVDKEKNQRRGFIFVTYETTAAADAAVKKP 188
Query: 112 GHTMEGK 118
T+ GK
Sbjct: 189 KQTINGK 195
>gi|297853192|ref|XP_002894477.1| hypothetical protein ARALYDRAFT_474538 [Arabidopsis lyrata subsp.
lyrata]
gi|297340319|gb|EFH70736.1| hypothetical protein ARALYDRAFT_474538 [Arabidopsis lyrata subsp.
lyrata]
Length = 417
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 58/119 (48%), Gaps = 12/119 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYA---SNGAPGQGPQ------SEG 51
+ EMNG + SSR +R AT + G + ++SS G +NG+ G + E
Sbjct: 202 INEMNGKWLSSRQIRCNWATKGATFG-EDKHSSDGKSVVELTNGSSEDGRELSNEDAPEN 260
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQY--GEIASVKIPVGKGCGFVQFANSLGQIMAI 108
+ TT++VG L P VT DL + F G I V++ KG GFV++ +AI
Sbjct: 261 NPQYTTVYVGNLSPEVTQLDLHRLFYTLGAGAIEEVRVQRDKGFGFVRYNTHDEAALAI 319
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 36/79 (45%), Gaps = 10/79 (12%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANS 101
Q E SS+ IFVG L P VTD L FS + + ++ +G GFV F N
Sbjct: 136 QREDTSSHFNIFVGDLSPEVTDAALFDSFSAFNSCSDARVMWDQKTGRSRGFGFVSFRNQ 195
Query: 102 LGQIMAINGVGHTMEGKFM 120
AIN M GK++
Sbjct: 196 QDAQTAIN----EMNGKWL 210
>gi|392927018|ref|NP_509705.3| Protein TIAR-3 [Caenorhabditis elegans]
gi|211970450|emb|CAB01717.3| Protein TIAR-3 [Caenorhabditis elegans]
Length = 450
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 14/110 (12%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGL 63
MNG + R +R A + S + + + + + S A NT+++VG +
Sbjct: 286 MNGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKA-----------DNTSVYVGNI 334
Query: 64 DPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN---SLGQIMAING 110
TD DLR FS YG+IA V+I + FV++ + IM +NG
Sbjct: 335 SQQTTDADLRDLFSTYGDIAEVRIFKTQRYAFVRYEKKECATKAIMEMNG 384
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 10/74 (13%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANSLGQIM 106
S + +FVG L +V++E L+ F+++GE++ K+ KG GFV F N
Sbjct: 222 SKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAEN 281
Query: 107 AINGVGHTMEGKFM 120
AI G M GK++
Sbjct: 282 AIAG----MNGKWI 291
>gi|451993269|gb|EMD85743.1| hypothetical protein COCHEDRAFT_1187580 [Cochliobolus
heterostrophus C5]
Length = 827
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 34/65 (52%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEG 117
++VG LD + T++ LRQ FS+YGEI V K C FV F N I AI + E
Sbjct: 510 VYVGNLDESWTEDRLRQDFSEYGEIELVNTLREKSCAFVNFTNIANAIKAIEAIRGREEY 569
Query: 118 KFMMV 122
K V
Sbjct: 570 KRFKV 574
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 9/75 (12%)
Query: 41 GAPGQGP-------QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
G P Q P Q G S N +++G L +VT+++LR+ S++G I +VKI K
Sbjct: 263 GKPSQVPTSVALAVQQSGASRN--VYLGNLPEDVTEDELREDLSKFGPIDTVKIVREKAI 320
Query: 94 GFVQFANSLGQIMAI 108
GFV F + I A+
Sbjct: 321 GFVHFLSIGNAIKAV 335
>gi|340516363|gb|EGR46612.1| predicted protein [Trichoderma reesei QM6a]
Length = 785
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV-GHTME 116
+++G LD T+E LRQ F++YGEI V K C FV F N I AI + G
Sbjct: 512 VYIGNLDETWTEERLRQDFAEYGEIELVNALREKSCAFVNFTNIANAIKAIEAIRGKEEY 571
Query: 117 GKFMMVMG 124
KF + G
Sbjct: 572 KKFKVNFG 579
Score = 42.0 bits (97), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 41 GAPGQGP-------QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
G P Q P Q G S N +++G L +TDE+LR+ ++G I ++KI KG
Sbjct: 265 GKPSQVPTSVALAVQQSGASRN--VYLGNLPEEITDEELREDLGKFGPIDTIKIVREKGI 322
Query: 94 GFVQFANSLGQIMAI 108
F+ + + I A+
Sbjct: 323 AFIHYLSIANAIKAV 337
>gi|312080690|ref|XP_003142708.1| hypothetical protein LOAG_07126 [Loa loa]
Length = 366
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 8/108 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +MNG RP+R A R G + YA + ++NT+++V
Sbjct: 189 IEKMNGQMIGRRPIRTNWAVRRFDGGEE--------YAMKPPTYDNIFNATHATNTSVYV 240
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
GG+ P TDE+L QPFS + V++ +G FV++ AI
Sbjct: 241 GGISPATTDEELMQPFSAIATVTEVRLFKQQGYAFVRYLTKDAATRAI 288
>gi|156358574|ref|XP_001624592.1| predicted protein [Nematostella vectensis]
gi|156211382|gb|EDO32492.1| predicted protein [Nematostella vectensis]
Length = 235
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ EM+ V + ++ A RK++ Q +Y + Q Q NTT++V
Sbjct: 145 IAEMDSVTIGGKQVKTNWAA-RKNNPTQSKYVCVKNLLWDDVFHQSSQL-----NTTVYV 198
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQ 97
G L P+V D +L+Q FSQYG I K+ KG F++
Sbjct: 199 GNLPPDVKDYELQQMFSQYGSILETKVFADKGYAFIK 235
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 40 NGAPGQGPQSEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PV---GKG 92
N A GD++N IFVG L NV + LR+ F +GEI+ V++ P KG
Sbjct: 70 NWATNHPGMKRGDTNNHFHIFVGDLAENVDNALLRKTFEPFGEISEVRVVKDPAKNKSKG 129
Query: 93 CGFVQFANSLGQIMAI 108
GFV F AI
Sbjct: 130 FGFVSFVRREDAAKAI 145
>gi|71999552|ref|NP_001023573.1| Protein SQD-1, isoform a [Caenorhabditis elegans]
gi|351059312|emb|CCD74155.1| Protein SQD-1, isoform a [Caenorhabditis elegans]
Length = 305
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 6/76 (7%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANSLGQIM 106
+ + IFVGG+ P V +EDL F+QYGE+A ++ +G FV+F G +
Sbjct: 26 NEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKL 85
Query: 107 AINGVGHTMEGKFMMV 122
A+ T++GK + V
Sbjct: 86 ALAAREQTIKGKSVEV 101
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 24/38 (63%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK 91
N +FVGGL + +++DLR F Q+G++ ++ P K
Sbjct: 108 ENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDK 145
>gi|384249677|gb|EIE23158.1| hypothetical protein COCSUDRAFT_42089 [Coccomyxa subellipsoidea
C-169]
Length = 986
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 13/89 (14%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCG 94
G G +GD T ++VG L P++ +E L++ F ++G+IASVKI G+ CG
Sbjct: 157 GAGSFDDGDPYTTNLYVGNLAPDIDEEVLKREFGRFGDIASVKIMWPRDEDQRRRGRNCG 216
Query: 95 FVQFANSLGQIMA---ING-VGHTMEGKF 119
FV F G A +NG + H +E K
Sbjct: 217 FVAFMTRAGADRAKADLNGAILHDLELKL 245
>gi|348535548|ref|XP_003455262.1| PREDICTED: pre-mRNA-splicing factor RBM22-like [Oreochromis
niloticus]
Length = 427
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D S TT+++GGL VTD DL+ F Q+GEI ++ I + C F+QFA
Sbjct: 228 DKSITTLYIGGLGDTVTDGDLKSHFYQFGEIRTITIVQRQQCAFIQFA 275
>gi|393907830|gb|EFO21360.2| hypothetical protein LOAG_07126 [Loa loa]
Length = 317
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 8/108 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +MNG RP+R A R G + YA + ++NT+++V
Sbjct: 189 IEKMNGQMIGRRPIRTNWAVRRFDGGEE--------YAMKPPTYDNIFNATHATNTSVYV 240
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
GG+ P TDE+L QPFS + V++ +G FV++ AI
Sbjct: 241 GGISPATTDEELMQPFSAIATVTEVRLFKQQGYAFVRYLTKDAATRAI 288
>gi|358379422|gb|EHK17102.1| hypothetical protein TRIVIDRAFT_42055 [Trichoderma virens Gv29-8]
Length = 785
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV-GHTME 116
+++G LD T+E LRQ F++YGEI V K C FV F N I AI + G
Sbjct: 512 VYIGNLDETWTEERLRQDFTEYGEIELVNALREKSCAFVNFTNIANAIKAIEAIRGKEEY 571
Query: 117 GKFMMVMG 124
KF + G
Sbjct: 572 KKFKVNFG 579
Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 9/75 (12%)
Query: 41 GAPGQGP-------QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
G P Q P Q G S N +++G L ++DE+LR+ ++G I ++KI K
Sbjct: 265 GKPSQVPTSVALAVQQSGASRN--VYLGNLPEEISDEELREDLGKFGAIDTIKIVREKSI 322
Query: 94 GFVQFANSLGQIMAI 108
F+ + + I A+
Sbjct: 323 AFIHYLSIANAIKAV 337
>gi|336364881|gb|EGN93234.1| hypothetical protein SERLA73DRAFT_163561 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1420
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%)
Query: 45 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQ 104
+GP S+ + ++++G LD VT E L F+ YG I S+++ K CGFV F +
Sbjct: 571 EGPNSQIQTPTRSLWIGNLDSAVTSEQLIHVFAPYGAIESLRLLPEKECGFVNFVDQGDA 630
Query: 105 IMAINGVGHTMEGKFMMVMGMLFR 128
I A + V + + G M G R
Sbjct: 631 IRAKDDVLNRLGGNIGMPNGQTVR 654
>gi|67900986|ref|XP_680749.1| hypothetical protein AN7480.2 [Aspergillus nidulans FGSC A4]
gi|40742870|gb|EAA62060.1| hypothetical protein AN7480.2 [Aspergillus nidulans FGSC A4]
gi|259483786|tpe|CBF79461.1| TPA: differentiation regulator (Nrd1), putative (AFU_orthologue;
AFUA_2G05670) [Aspergillus nidulans FGSC A4]
Length = 830
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEG 117
++VG LD + ++ LRQ FS+YGEI V K C FV F N I AI G+ + E
Sbjct: 503 VYVGNLDESWAEDRLRQDFSEYGEIELVNTLREKSCAFVNFTNIANAIKAIEGMRNREEY 562
Query: 118 KFMMV 122
+ +
Sbjct: 563 RRFKI 567
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 9/75 (12%)
Query: 41 GAPGQGP-------QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
G P Q P Q G S N +++G L T+++LR+ ++G I +VKI K
Sbjct: 256 GKPSQVPTSVALAVQQSGASRN--VYLGNLPEETTEDELREELGKFGPIDTVKIVKEKAI 313
Query: 94 GFVQFANSLGQIMAI 108
GFV F + + A+
Sbjct: 314 GFVHFLSITNAMKAV 328
>gi|453085191|gb|EMF13234.1| hypothetical protein SEPMUDRAFT_148601 [Mycosphaerella populorum
SO2202]
Length = 908
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 32/65 (49%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEG 117
++VG LD T++ LRQ F +YGEI V K C FV F N I AI V E
Sbjct: 539 VYVGNLDETWTEDRLRQDFQEYGEIELVNTLREKSCAFVNFTNIANAIKAIEAVRGKEEY 598
Query: 118 KFMMV 122
K V
Sbjct: 599 KRFKV 603
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMA 107
Q G S N +++G L ++++E+LR+ ++G + +VKI K GFV F + I A
Sbjct: 306 QQSGASRN--VYLGNLSEDMSEEELREDLGKFGPVDTVKIVREKAIGFVHFLSIGNAIKA 363
Query: 108 I 108
+
Sbjct: 364 V 364
>gi|451850136|gb|EMD63438.1| hypothetical protein COCSADRAFT_327942 [Cochliobolus sativus
ND90Pr]
Length = 823
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 34/65 (52%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEG 117
++VG LD + T++ LRQ FS+YGEI V K C FV F N I AI + E
Sbjct: 510 VYVGNLDESWTEDRLRQDFSEYGEIELVNTLREKSCAFVNFTNIANAIKAIEAIRGREEY 569
Query: 118 KFMMV 122
K V
Sbjct: 570 KRFKV 574
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 9/75 (12%)
Query: 41 GAPGQGP-------QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
G P Q P Q G S N +++G L +VT+++LR+ S++G I +VKI K
Sbjct: 263 GKPSQVPTSVALAVQQSGASRN--VYLGNLPEDVTEDELREDLSKFGPIDTVKIVREKAI 320
Query: 94 GFVQFANSLGQIMAI 108
GFV F + I A+
Sbjct: 321 GFVHFLSIGNAIKAV 335
>gi|186478580|ref|NP_001117301.1| oligouridylate binding protein 1B [Arabidopsis thaliana]
gi|332191459|gb|AEE29580.1| oligouridylate binding protein 1B [Arabidopsis thaliana]
Length = 416
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 11/117 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ-------GGYASNGAPGQGPQSEGDS 53
+ E+ G + SR +R AT +SG +Q S G + G+ P E ++
Sbjct: 197 IDEITGKWLGSRQIRCNWATKGATSGEDKQSSDSKSVVELTSGDGKDTTNGEAP--ENNA 254
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGE--IASVKIPVGKGCGFVQFANSLGQIMAI 108
TT++VG L P V+ DL + F G I V++ KG GFV+++ + +AI
Sbjct: 255 QYTTVYVGNLAPEVSQVDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHVEAALAI 311
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANS 101
Q E SS+ IFVG L P VTD L FS Y + ++ +G GFV F N
Sbjct: 131 QREDTSSHFNIFVGDLSPEVTDAMLFTCFSVYPTCSDARVMWDQKTGRSRGFGFVSFRNQ 190
Query: 102 LGQIMAINGV 111
AI+ +
Sbjct: 191 QDAQTAIDEI 200
>gi|432877083|ref|XP_004073098.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Oryzias
latipes]
Length = 347
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 45 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQF 98
Q +SE + IFVGGL ++ ++DL FSQYGE+ + +I K G GFV F
Sbjct: 86 QADESEARAKVKKIFVGGLKNDIQEDDLTDYFSQYGEVENSEIISEKTTGKKRGFGFVHF 145
Query: 99 ANSLGQIMAINGVGHTMEGKFMMVMGMLFRHQM 131
+ MA+ H + G + V + + +M
Sbjct: 146 TDDYAADMAVAVPFHIVNGHRVEVKKAVPKQEM 178
>gi|71999554|ref|NP_001023574.1| Protein SQD-1, isoform b [Caenorhabditis elegans]
gi|351059313|emb|CCD74156.1| Protein SQD-1, isoform b [Caenorhabditis elegans]
Length = 308
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 6/76 (7%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANSLGQIM 106
+ + IFVGG+ P V +EDL F+QYGE+A ++ +G FV+F G +
Sbjct: 26 NEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKL 85
Query: 107 AINGVGHTMEGKFMMV 122
A+ T++GK + V
Sbjct: 86 ALAAREQTIKGKSVEV 101
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 24/38 (63%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK 91
N +FVGGL + +++DLR F Q+G++ ++ P K
Sbjct: 108 ENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDK 145
>gi|432958384|ref|XP_004086005.1| PREDICTED: uncharacterized protein LOC101170742, partial [Oryzias
latipes]
Length = 372
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
Query: 45 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQF 98
Q +SE + IFVGGL ++ ++DL FSQYGE+ + +I K G GFV F
Sbjct: 171 QADESEARAKVKKIFVGGLKNDIQEDDLTDYFSQYGEVENSEIISEKTTGKKRGFGFVHF 230
Query: 99 ANSLGQIMAINGVGHTMEGKFMMVMGMLFRHQMTQACTLQQLRP 142
+ MA+ H + G + V + + +M QA + ++ P
Sbjct: 231 TDDYAADMAVAVPFHIVNGHRVEVKKAVPKQEM-QAPSRIRMTP 273
>gi|336377458|gb|EGO18620.1| hypothetical protein SERLADRAFT_418814 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1383
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%)
Query: 45 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQ 104
+GP S+ + ++++G LD VT E L F+ YG I S+++ K CGFV F +
Sbjct: 571 EGPNSQIQTPTRSLWIGNLDSAVTSEQLIHVFAPYGAIESLRLLPEKECGFVNFVDQGDA 630
Query: 105 IMAINGVGHTMEGKFMMVMGMLFR 128
I A + V + + G M G R
Sbjct: 631 IRAKDDVLNRLGGNIGMPNGQTVR 654
>gi|391346968|ref|XP_003747737.1| PREDICTED: uncharacterized protein LOC100908183 [Metaseiulus
occidentalis]
Length = 374
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEG 117
+FVG L P++T +DL + F +YGEIA++ I G GFV+FAN ++A + G +G
Sbjct: 23 VFVGYLKPHITRKDLFEIFRKYGEIAAISI-NRNGYGFVEFANEESALLATDENGRPNKG 81
Query: 118 KFMMV 122
V
Sbjct: 82 GVFQV 86
>gi|225558477|gb|EEH06761.1| RNA-binding protein Nrd1 [Ajellomyces capsulatus G186AR]
Length = 804
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 32/65 (49%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEG 117
+++G LD T+E LRQ FS YGEI V K C FV F N I AI + E
Sbjct: 487 VYIGNLDETWTEERLRQDFSSYGEIELVNALREKSCAFVNFTNIANAIKAIEAMRSREEY 546
Query: 118 KFMMV 122
K +
Sbjct: 547 KRFKI 551
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 41 GAPGQGP-------QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
G P Q P Q G S N +++G L +VT+E+LR+ ++G I ++KI K
Sbjct: 240 GKPSQVPTSVALAVQQSGASRN--VYLGNLAEDVTEEELREDLGKFGPIDTIKIVKEKSI 297
Query: 94 GFVQFANSLGQIMAI 108
GFV F + I A+
Sbjct: 298 GFVHFLSISNAIKAV 312
>gi|367014399|ref|XP_003681699.1| hypothetical protein TDEL_0E02450 [Torulaspora delbrueckii]
gi|359749360|emb|CCE92488.1| hypothetical protein TDEL_0E02450 [Torulaspora delbrueckii]
Length = 472
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 55/130 (42%), Gaps = 22/130 (16%)
Query: 1 MTEMNGVYCSSRPMRIGAA-----TPRKSSGYQQQYSSQGGYASNGAPG----------- 44
+ EM G + R +R+G+A R G + + S+ P
Sbjct: 202 LQEMTGTFLKGRAIRVGSAGHQNQRNRNGPGLENKLKGLNATVSSPKPANISSTNFSQFI 261
Query: 45 ----QGP--QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF 98
Q P S D +NTT+FV L VT+ +L+ F +G + K+P K CGFVQ+
Sbjct: 262 LPTQQLPPLNSFTDRNNTTLFVSSLSHMVTENELKAFFQPFGNVIYAKLPENKQCGFVQY 321
Query: 99 ANSLGQIMAI 108
+ MAI
Sbjct: 322 VDRASAEMAI 331
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI------PVGKG 92
N + G ++G S+ ++FVG L PNVT+ DL + F S+ ++ K+ V KG
Sbjct: 128 NWSSASGNSADG-SNEISVFVGDLAPNVTESDLFELFISKCPSTSNAKVMYDQVTGVSKG 186
Query: 93 CGFVQFANSLGQIMAINGVGHTMEGKFM 120
FV+F N Q A+ M G F+
Sbjct: 187 YAFVRFGNQEDQQRAL----QEMTGTFL 210
>gi|291243067|ref|XP_002741428.1| PREDICTED: RNA binding motif protein 22-like [Saccoglossus
kowalevskii]
Length = 429
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMA 107
D + TT++VGGL ++++DLR F Q+GEI S+ + + C FVQF +A
Sbjct: 228 DRTITTLYVGGLGDKISEKDLRDHFYQFGEIRSINVVARQQCAFVQFTTRQSSELA 283
>gi|119192784|ref|XP_001246998.1| hypothetical protein CIMG_00769 [Coccidioides immitis RS]
gi|392863768|gb|EAS35463.2| differentiation regulator [Coccidioides immitis RS]
Length = 838
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV-GHTME 116
+++G LD + T++ LRQ FS YGEI V K C FV F N I AI G+ G
Sbjct: 513 VYIGNLDESWTEDRLRQDFSAYGEIELVNALREKSCAFVNFTNIANAIKAIEGMRGREEY 572
Query: 117 GKFMMVMG 124
+F + G
Sbjct: 573 KRFKINFG 580
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 9/76 (11%)
Query: 41 GAPGQGP-------QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
G P Q P Q G S N +++G L +VT+E+LR+ ++G I +VKI K
Sbjct: 266 GKPSQVPTSVALAVQQSGASRN--VYLGNLSEDVTEEELREELGKFGPIDTVKIVREKSI 323
Query: 94 GFVQFANSLGQIMAIN 109
GFV F + I A+N
Sbjct: 324 GFVHFLSISNAIKAVN 339
>gi|320033597|gb|EFW15544.1| differentiation regulator [Coccidioides posadasii str. Silveira]
Length = 684
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV-GHTM 115
+++G LD + T++ LRQ FS YGEI V K C FV F N I AI G+ G
Sbjct: 358 NVYIGNLDESWTEDRLRQDFSAYGEIELVNALREKSCAFVNFTNIANAIKAIEGMRGREE 417
Query: 116 EGKFMMVMG 124
+F + G
Sbjct: 418 YKRFKINFG 426
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Query: 41 GAPGQGP-------QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
G P Q P Q G S N +++G L +V +E+LR+ ++G I +VKI K
Sbjct: 112 GKPSQVPTSVALAVQQSGASRN--VYLGNLSEDVAEEELREELGKFGPIDTVKIVREKSI 169
Query: 94 GFVQFANSLGQIMAIN 109
GFV F + I A+N
Sbjct: 170 GFVHFLSISNAIKAVN 185
>gi|171460908|ref|NP_080752.2| U2 snRNP-associated SURP motif-containing protein isoform 2 [Mus
musculus]
Length = 985
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 198 RRSMDVPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 255
Query: 82 IASVKI---------PVGKGCGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
+ASVKI + CGFV F N A+ + M F M +G
Sbjct: 256 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLG 307
>gi|281342682|gb|EFB18266.1| hypothetical protein PANDA_005047 [Ailuropoda melanoleuca]
Length = 954
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 212 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 269
Query: 82 IASVKI---------PVGKGCGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
+ASVKI + CGFV F N A+ + M F M +G
Sbjct: 270 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLG 321
>gi|303312581|ref|XP_003066302.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240105964|gb|EER24157.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
Length = 838
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV-GHTME 116
+++G LD + T++ LRQ FS YGEI V K C FV F N I AI G+ G
Sbjct: 513 VYIGNLDESWTEDRLRQDFSAYGEIELVNALREKSCAFVNFTNIANAIKAIEGMRGREEY 572
Query: 117 GKFMMVMG 124
+F + G
Sbjct: 573 KRFKINFG 580
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Query: 41 GAPGQGP-------QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
G P Q P Q G S N +++G L +V +E+LR+ ++G I +VKI K
Sbjct: 266 GKPSQVPTSVALAVQQSGASRN--VYLGNLSEDVAEEELREELGKFGPIDTVKIVREKSI 323
Query: 94 GFVQFANSLGQIMAIN 109
GFV F + I A+N
Sbjct: 324 GFVHFLSISNAIKAVN 339
>gi|293349374|ref|XP_002727165.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
[Rattus norvegicus]
gi|293361281|ref|XP_002730000.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
isoform 1 [Rattus norvegicus]
Length = 985
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 198 RRSMDVPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 255
Query: 82 IASVKI---------PVGKGCGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
+ASVKI + CGFV F N A+ + M F M +G
Sbjct: 256 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLG 307
>gi|76163139|gb|AAX30926.2| SJCHGC08802 protein [Schistosoma japonicum]
Length = 171
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 33/48 (68%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D + TT+++GG+ +T++DLR F Q+GE+ SV + + C F+QFA
Sbjct: 81 DRTITTLYIGGIPDGMTEKDLRNHFYQFGELRSVNLHAKQHCAFIQFA 128
>gi|325094265|gb|EGC47575.1| RNA-binding protein [Ajellomyces capsulatus H88]
Length = 817
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 32/65 (49%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEG 117
+++G LD T+E LRQ FS YGEI V K C FV F N I AI + E
Sbjct: 500 VYIGNLDETWTEERLRQDFSSYGEIELVNALREKSCAFVNFTNIANAIKAIEAMRSREEY 559
Query: 118 KFMMV 122
K +
Sbjct: 560 KRFKI 564
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 41 GAPGQGP-------QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
G P Q P Q G S N +++G L +VT+E+LR+ ++G I ++KI K
Sbjct: 253 GKPSQVPTSVALAVQQSGASRN--VYLGNLAEDVTEEELREDLGKFGPIDTIKIVKEKSI 310
Query: 94 GFVQFANSLGQIMAI 108
GFV F + I A+
Sbjct: 311 GFVHFLSISNAIKAV 325
>gi|239606290|gb|EEQ83277.1| differentiation regulator [Ajellomyces dermatitidis ER-3]
Length = 818
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 32/65 (49%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEG 117
+++G LD T+E LRQ FS YGEI V K C FV F N I AI + E
Sbjct: 500 VYIGNLDETWTEERLRQDFSSYGEIELVNALREKSCAFVNFTNIANAIKAIEAMRSREEY 559
Query: 118 KFMMV 122
K +
Sbjct: 560 KRFKI 564
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 41 GAPGQGP-------QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
G P Q P Q G S N +++G L +VT+E+LR+ ++G I ++KI K
Sbjct: 253 GKPSQVPTSVALAVQQSGASRN--VYLGNLAEDVTEEELREDLGKFGPIDTIKIVKEKSI 310
Query: 94 GFVQFANSLGQIMAI 108
GFV F + I A+
Sbjct: 311 GFVHFLSISNAIKAV 325
>gi|169621321|ref|XP_001804071.1| hypothetical protein SNOG_13871 [Phaeosphaeria nodorum SN15]
gi|111057775|gb|EAT78895.1| hypothetical protein SNOG_13871 [Phaeosphaeria nodorum SN15]
Length = 831
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 34/66 (51%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTME 116
+++G LD + T++ LRQ FS+YGEI V K C FV F N I AI + E
Sbjct: 509 NVYIGNLDESWTEDRLRQDFSEYGEIELVNTLREKSCAFVNFTNIANAIKAIEAIRGREE 568
Query: 117 GKFMMV 122
K V
Sbjct: 569 YKRFKV 574
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 9/75 (12%)
Query: 41 GAPGQGP-------QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
G P Q P Q G S N +++G L +V++++LR+ S++G I +VKI K
Sbjct: 263 GKPSQVPTSVALAVQQSGASRN--VYLGNLPEDVSEDELREDLSKFGPIDTVKIVREKAI 320
Query: 94 GFVQFANSLGQIMAI 108
GFV F + I A+
Sbjct: 321 GFVHFLSIGNAIKAV 335
>gi|261187483|ref|XP_002620164.1| differentiation regulator [Ajellomyces dermatitidis SLH14081]
gi|239594177|gb|EEQ76758.1| differentiation regulator [Ajellomyces dermatitidis SLH14081]
gi|327356538|gb|EGE85395.1| differentiation regulator [Ajellomyces dermatitidis ATCC 18188]
Length = 818
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 32/65 (49%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEG 117
+++G LD T+E LRQ FS YGEI V K C FV F N I AI + E
Sbjct: 500 VYIGNLDETWTEERLRQDFSSYGEIELVNALREKSCAFVNFTNIANAIKAIEAMRSREEY 559
Query: 118 KFMMV 122
K +
Sbjct: 560 KRFKI 564
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 41 GAPGQGP-------QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
G P Q P Q G S N +++G L +VT+E+LR+ ++G I ++KI K
Sbjct: 253 GKPSQVPTSVALAVQQSGASRN--VYLGNLAEDVTEEELREDLGKFGPIDTIKIVKEKSI 310
Query: 94 GFVQFANSLGQIMAI 108
GFV F + I A+
Sbjct: 311 GFVHFLSISNAIKAV 325
>gi|256084514|ref|XP_002578473.1| hypothetical protein [Schistosoma mansoni]
gi|353229225|emb|CCD75396.1| hypothetical protein Smp_161730 [Schistosoma mansoni]
Length = 1232
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 9/60 (15%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFVQFAN 100
+GD + T +F+G L+P +T++ L + F +YG +ASVKI G+ CGFV F N
Sbjct: 218 DGDRTTTNLFLGNLNPKMTEQQLCEAFGRYGPLASVKIMWPRTEEERSRGRNCGFVAFMN 277
>gi|346971422|gb|EGY14874.1| RNA recognition motif containing protein [Verticillium dahliae
VdLs.17]
Length = 810
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTME- 116
+++G LD T+E LRQ FS++GEI V K C FV F N I AI V E
Sbjct: 533 VYIGNLDETWTEERLRQDFSEFGEIELVNALREKSCAFVNFTNIANAIKAIEAVRSKEEY 592
Query: 117 GKFMMVMG 124
KF + G
Sbjct: 593 RKFKVNFG 600
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 41 GAPGQGP-------QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
G P Q P Q G S N +++G L ++T+E+LR+ ++G I +VKI K
Sbjct: 286 GKPSQVPTSVALAVQQSGASRN--VYLGNLPEDITEEELREDLGKFGAIDTVKIVREKSI 343
Query: 94 GFVQFANSLGQIMAI 108
F+ F + I A+
Sbjct: 344 AFIHFLSISNAIKAV 358
>gi|384491753|gb|EIE82949.1| hypothetical protein RO3G_07654 [Rhizopus delemar RA 99-880]
Length = 459
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSL 102
P Q Q+ + +++GG+D V ++ LRQ F Q+GEI V K C FV F +
Sbjct: 349 PSQVAQAIQQGATRNVYIGGIDETVNEDKLRQDFEQFGEIELVNTHKEKSCAFVNFTSVN 408
Query: 103 GQIMAINGV 111
+ A+ G+
Sbjct: 409 SAVAAVAGI 417
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
+++G +D ++T E L +YG I VK+ V K C FV F N
Sbjct: 160 VYIGKIDSSLTKEKLTAEAIKYGPIEEVKVVVEKSCAFVHFLN 202
>gi|170585852|ref|XP_001897696.1| RNA recognition motif containing protein [Brugia malayi]
gi|312066609|ref|XP_003136351.1| RNA recognition domain-containing protein containing protein [Loa
loa]
gi|158595003|gb|EDP33580.1| RNA recognition motif containing protein, putative [Brugia malayi]
gi|307768478|gb|EFO27712.1| RNA recognition domain-containing protein containing protein [Loa
loa]
gi|402585724|gb|EJW79663.1| RNA-binding protein [Wuchereria bancrofti]
Length = 300
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 6/76 (7%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG------FVQFANSLGQIM 106
+ + IFVGG+ +VT+EDL Q FSQYGE+A ++ + G FV+F
Sbjct: 35 NEDKKIFVGGIAYDVTNEDLSQYFSQYGEVAQAQVKYDRNTGRSRGFAFVEFTTGEACRA 94
Query: 107 AINGVGHTMEGKFMMV 122
A+N +++GK + V
Sbjct: 95 ALNAREQSLKGKTVEV 110
Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK 91
N +FVGGL + +E+LR F QYG++ ++ P K
Sbjct: 117 ENKKVFVGGLPADHPEEELRAHFEQYGKVEDIEWPFDK 154
>gi|302406142|ref|XP_003000907.1| RNA recognition motif containing protein [Verticillium albo-atrum
VaMs.102]
gi|261360165|gb|EEY22593.1| RNA recognition motif containing protein [Verticillium albo-atrum
VaMs.102]
Length = 767
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTME- 116
+++G LD T+E LRQ FS++GEI V K C FV F N I AI V E
Sbjct: 490 VYIGNLDETWTEERLRQDFSEFGEIELVNALREKSCAFVNFTNIANAIKAIEAVRSKEEY 549
Query: 117 GKFMMVMG 124
KF + G
Sbjct: 550 RKFKVNFG 557
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 41 GAPGQGP-------QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
G P Q P Q G S N +++G L ++T+E+LR+ ++G I +VKI K
Sbjct: 286 GKPSQVPTSVALAVQQSGASRN--VYLGNLPEDITEEELREDLGKFGAIDTVKIVREKSI 343
Query: 94 GFVQFANSLGQIMAI 108
F+ F + I A+
Sbjct: 344 AFIHFLSISNAIKAV 358
>gi|171460910|ref|NP_001108449.1| U2 snRNP-associated SURP motif-containing protein isoform 1 [Mus
musculus]
gi|341942111|sp|Q6NV83.3|SR140_MOUSE RecName: Full=U2 snRNP-associated SURP motif-containing protein;
AltName: Full=140 kDa Ser/Arg-rich domain protein;
AltName: Full=U2-associated protein SR140
Length = 1029
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDVPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
+ASVKI + CGFV F N A+ + M F M +G
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLG 351
>gi|297738892|emb|CBI28137.3| unnamed protein product [Vitis vinifera]
Length = 347
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 6/76 (7%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP----VGKGC-GFVQFANSLGQIMA 107
+ +I+VGGL N T++ +R+ F+ YG I +VKI VG C GFV F N I A
Sbjct: 4 DDDNSIYVGGLPYNATEDSIRKVFNLYGAIVAVKIINERGVGGKCYGFVTFTNPRSAIDA 63
Query: 108 INGV-GHTMEGKFMMV 122
IN + G ++G+ ++V
Sbjct: 64 INDMNGRDIDGRIVVV 79
>gi|452824419|gb|EME31422.1| glycine-rich RNA binding protein isoform 1 [Galdieria sulphuraria]
Length = 148
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 47/85 (55%), Gaps = 7/85 (8%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANSLGQIM 106
S + +FVGGL ++++EDL+Q FS+YGE+ ++ + +G GF+ +A S
Sbjct: 2 SEDNRVFVGGLPWSISEEDLKQVFSKYGEVVDARVVIDRETGRSRGFGFISYAESSSVDE 61
Query: 107 AINGV-GHTMEGKFMMVMGMLFRHQ 130
I + G ++G+ + V + R Q
Sbjct: 62 CIAALDGQDLQGRTIRVNKAMTREQ 86
>gi|431899775|gb|ELK07722.1| U2-associated protein SR140 [Pteropus alecto]
Length = 1041
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 254 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 311
Query: 82 IASVKI---------PVGKGCGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
+ASVKI + CGFV F N A+ + M F M +G
Sbjct: 312 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLG 363
>gi|348581626|ref|XP_003476578.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
[Cavia porcellus]
Length = 937
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 150 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 207
Query: 82 IASVKI---------PVGKGCGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
+ASVKI + CGFV F N A+ + M F M +G
Sbjct: 208 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLG 259
>gi|170087476|ref|XP_001874961.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650161|gb|EDR14402.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1160
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 47 PQSEGDSSNT-----TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANS 101
P+SEG +S ++++G LD VT E L F+ YG I S+++ K CGFV F +
Sbjct: 378 PKSEGQNSQIQTPTRSLWIGNLDSAVTSEQLIHVFAPYGAIESLRLLPEKECGFVNFVDQ 437
Query: 102 LGQIMAINGVGHTMEGKFMMVMGMLFR 128
I A V + + G M G + R
Sbjct: 438 ADAIRAKEDVLNRLGGNIGMPNGQMVR 464
>gi|62654101|ref|XP_236501.3| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
isoform 2 [Rattus norvegicus]
gi|109485106|ref|XP_001065014.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
isoform 2 [Rattus norvegicus]
Length = 1029
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDVPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
+ASVKI + CGFV F N A+ + M F M +G
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLG 351
>gi|154413444|ref|XP_001579752.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121913962|gb|EAY18766.1| hypothetical protein TVAG_267990 [Trichomonas vaginalis G3]
Length = 248
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 9/103 (8%)
Query: 19 ATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQ 78
A PR + ++ + A G+ P+S+ + +T +F+ + P T++DLR SQ
Sbjct: 11 AQPRARAAFRGPRPQSESFQRTPASGRRPRSQVITPSTNVFINYIPPRFTEQDLRNLCSQ 70
Query: 79 YGEIASVKIPV------GKGCGFVQF---ANSLGQIMAINGVG 112
YGEI S KI + K GFV+F + + I AI+G+
Sbjct: 71 YGEIISSKIMINLETGQSKCFGFVKFRELSQAHAAIQAIDGMS 113
>gi|50545429|ref|XP_500252.1| YALI0A19668p [Yarrowia lipolytica]
gi|49646117|emb|CAG84190.1| YALI0A19668p [Yarrowia lipolytica CLIB122]
Length = 823
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 6/102 (5%)
Query: 13 PMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQ---GP---QSEGDSSNTTIFVGGLDPN 66
P GA+T S+ S GG +GA GP Q E + + ++++G L P
Sbjct: 266 PHAGGASTSNASATASSGLHSVGGTPPHGATHSSLGGPPHSQYEEEKPSRSLWLGKLPPT 325
Query: 67 VTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
T + L FS YG + S +I K CGF+ FA+S + A+
Sbjct: 326 ATPQALHHIFSAYGTVESARILTHKNCGFINFADSQSALHAL 367
>gi|355721758|gb|AES07367.1| U2-associated SR140 protein [Mustela putorius furo]
Length = 1008
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 258 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 315
Query: 82 IASVKI---------PVGKGCGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
+ASVKI + CGFV F N A+ + M F M +G
Sbjct: 316 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLG 367
>gi|359484387|ref|XP_002281678.2| PREDICTED: uncharacterized protein LOC100245744 [Vitis vinifera]
Length = 399
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 6/76 (7%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP----VGKGC-GFVQFANSLGQIMA 107
+ +I+VGGL N T++ +R+ F+ YG I +VKI VG C GFV F N I A
Sbjct: 56 DDDNSIYVGGLPYNATEDSIRKVFNLYGAIVAVKIINERGVGGKCYGFVTFTNPRSAIDA 115
Query: 108 INGV-GHTMEGKFMMV 122
IN + G ++G+ ++V
Sbjct: 116 INDMNGRDIDGRIVVV 131
>gi|330918683|ref|XP_003298315.1| hypothetical protein PTT_08983 [Pyrenophora teres f. teres 0-1]
gi|311328549|gb|EFQ93581.1| hypothetical protein PTT_08983 [Pyrenophora teres f. teres 0-1]
Length = 827
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 30/54 (55%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
+++G LD T++ LRQ FS+YGEI V K C FV F N I AI +
Sbjct: 509 VYIGNLDETWTEDRLRQDFSEYGEIELVNTLREKSCAFVNFTNIANAIKAIEAI 562
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 9/75 (12%)
Query: 41 GAPGQGP-------QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
G P Q P Q G S N +++G L +V++E+LR+ S++G I +VKI K
Sbjct: 262 GKPSQVPTSVALAVQQSGASRN--VYLGNLSEDVSEEELREDLSKFGPIDTVKIVREKAI 319
Query: 94 GFVQFANSLGQIMAI 108
GFV F + I A+
Sbjct: 320 GFVHFLSIGNAIKAV 334
>gi|268536918|ref|XP_002633594.1| C. briggsae CBR-SQD-1 protein [Caenorhabditis briggsae]
Length = 301
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 6/76 (7%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANSLGQIM 106
+ + IFVGG+ P V +EDL F++YGE+A ++ +G FV+F G +
Sbjct: 26 NEDKKIFVGGISPEVNNEDLNSHFTKYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKL 85
Query: 107 AINGVGHTMEGKFMMV 122
A++ T++GK + V
Sbjct: 86 ALSAREQTIKGKSVEV 101
>gi|126338260|ref|XP_001372201.1| PREDICTED: u2 snRNP-associated SURP motif-containing protein
[Monodelphis domestica]
Length = 1034
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 246 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 303
Query: 82 IASVKI---------PVGKGCGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
+ASVKI + CGFV F N A+ + M F M +G
Sbjct: 304 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLG 355
>gi|76608208|ref|XP_877060.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein
isoform 6 [Bos taurus]
gi|297471247|ref|XP_002685082.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein [Bos
taurus]
gi|296491010|tpg|DAA33108.1| TPA: U2-associated SR140 protein [Bos taurus]
Length = 1029
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
+ASVKI + CGFV F N A+ + M F M +G
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLG 351
>gi|452984049|gb|EME83806.1| hypothetical protein MYCFIDRAFT_88975 [Pseudocercospora fijiensis
CIRAD86]
Length = 839
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 32/65 (49%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEG 117
+++G LD T++ LRQ F +YGEI V K C FV F N I AI V E
Sbjct: 520 VYIGNLDETWTEDRLRQDFQEYGEIELVNTLREKSCAFVNFTNIANAIKAIEAVRGKEEY 579
Query: 118 KFMMV 122
K V
Sbjct: 580 KRFKV 584
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMA 107
Q G S N +++G L ++T+E+LR+ S++G I +VKI K GFV F + I A
Sbjct: 287 QQSGASRN--VYLGNLQEDITEEELREDLSKFGPIDTVKIVKEKAIGFVHFLSIGNAIKA 344
Query: 108 I 108
+
Sbjct: 345 V 345
>gi|410355679|gb|JAA44443.1| U2 snRNP-associated SURP domain containing [Pan troglodytes]
Length = 1033
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 246 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 303
Query: 82 IASVKI---------PVGKGCGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
+ASVKI + CGFV F N A+ + M F M +G
Sbjct: 304 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLG 355
>gi|2224605|dbj|BAA20790.1| KIAA0332 [Homo sapiens]
gi|23336900|tpg|DAA00075.1| TPA_exp: U2-associated SR140 protein [Homo sapiens]
Length = 1028
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 241 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 298
Query: 82 IASVKI---------PVGKGCGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
+ASVKI + CGFV F N A+ + M F M +G
Sbjct: 299 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLG 350
>gi|410227838|gb|JAA11138.1| U2 snRNP-associated SURP domain containing [Pan troglodytes]
Length = 1034
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 247 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 304
Query: 82 IASVKI---------PVGKGCGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
+ASVKI + CGFV F N A+ + M F M +G
Sbjct: 305 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLG 356
>gi|296227904|ref|XP_002759567.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein
[Callithrix jacchus]
Length = 1029
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
+ASVKI + CGFV F N A+ + M F M +G
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLG 351
>gi|149064345|gb|EDM14548.1| RNA binding motif protein 22, isoform CRA_a [Rattus norvegicus]
Length = 377
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D + TT++VGGL +T+ DLR F Q+GEI +V + + C F+QFA
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTVTVVQRQQCAFIQFA 275
>gi|119599363|gb|EAW78957.1| hCG27481, isoform CRA_c [Homo sapiens]
Length = 1029
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
+ASVKI + CGFV F N A+ + M F M +G
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLG 351
>gi|440911806|gb|ELR61439.1| U2-associated protein SR140 [Bos grunniens mutus]
Length = 1035
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
+ASVKI + CGFV F N A+ + M F M +G
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLG 351
>gi|410355677|gb|JAA44442.1| U2 snRNP-associated SURP domain containing [Pan troglodytes]
Length = 1028
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 241 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 298
Query: 82 IASVKI---------PVGKGCGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
+ASVKI + CGFV F N A+ + M F M +G
Sbjct: 299 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLG 350
>gi|114589671|ref|XP_516796.2| PREDICTED: U2 snRNP-associated SURP motif-containing protein [Pan
troglodytes]
gi|410227836|gb|JAA11137.1| U2 snRNP-associated SURP domain containing [Pan troglodytes]
Length = 1029
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
+ASVKI + CGFV F N A+ + M F M +G
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLG 351
>gi|417405635|gb|JAA49525.1| Putative splicing regulator [Desmodus rotundus]
Length = 1029
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
+ASVKI + CGFV F N A+ + M F M +G
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLG 351
>gi|387915972|gb|AFK11595.1| DAZ-like protein [Callorhinchus milii]
Length = 258
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 9/102 (8%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFANSLGQIMAINGV 111
TIFVGG+D ++++++R F++YG + VKI V +G GFV F N + I+
Sbjct: 45 TIFVGGIDFEMSEDEMRGFFARYGAVKQVKIISDGGGVSRGYGFVSFHNDVDIQKIISES 104
Query: 112 GHTMEGKFMMVMGMLFRHQMTQACTLQQLRPMGL----TLCM 149
+GK + + + + Q + L Q RP L T CM
Sbjct: 105 QINFKGKKLKIGPAIRKQQDSYPIQLVQARPAPLIASPTSCM 146
>gi|291399919|ref|XP_002716620.1| PREDICTED: U2-associated SR140 protein [Oryctolagus cuniculus]
Length = 1029
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
+ASVKI + CGFV F N A+ + M F M +G
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLG 351
>gi|189206780|ref|XP_001939724.1| negative regulator of differentiation 1 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187975817|gb|EDU42443.1| negative regulator of differentiation 1 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 827
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 33/65 (50%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEG 117
+++G LD T++ LRQ FS+YGEI V K C FV F N I AI + E
Sbjct: 509 VYIGNLDETWTEDRLRQDFSEYGEIELVNTLREKSCAFVNFTNIANAIKAIEAIRGRDEY 568
Query: 118 KFMMV 122
K V
Sbjct: 569 KRFKV 573
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 9/75 (12%)
Query: 41 GAPGQGP-------QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
G P Q P Q G S N +++G L +V++E+LR+ S++G I +VKI K
Sbjct: 262 GKPSQVPTSVALAVQQSGASRN--VYLGNLSEDVSEEELREDLSKFGPIDTVKIVREKAI 319
Query: 94 GFVQFANSLGQIMAI 108
GFV F + I A+
Sbjct: 320 GFVHFLSIGNAIKAV 334
>gi|426218190|ref|XP_004003332.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein [Ovis
aries]
Length = 1029
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
+ASVKI + CGFV F N A+ + M F M +G
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLG 351
>gi|395832941|ref|XP_003789509.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein
[Otolemur garnettii]
Length = 1027
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 240 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 297
Query: 82 IASVKI---------PVGKGCGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
+ASVKI + CGFV F N A+ + M F M +G
Sbjct: 298 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLG 349
>gi|351694957|gb|EHA97875.1| U2-associated protein SR140 [Heterocephalus glaber]
Length = 1029
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
+ASVKI + CGFV F N A+ + M F M +G
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLG 351
>gi|345789304|ref|XP_534297.3| PREDICTED: U2 snRNP-associated SURP motif-containing protein [Canis
lupus familiaris]
Length = 1029
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
+ASVKI + CGFV F N A+ + M F M +G
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLG 351
>gi|344288968|ref|XP_003416218.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein
[Loxodonta africana]
Length = 1029
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
+ASVKI + CGFV F N A+ + M F M +G
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLG 351
>gi|335299677|ref|XP_003358644.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein [Sus
scrofa]
Length = 1029
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
+ASVKI + CGFV F N A+ + M F M +G
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLG 351
>gi|386346963|ref|YP_006045212.1| RNP-1 like RNA-binding protein [Spirochaeta thermophila DSM 6578]
gi|339411930|gb|AEJ61495.1| RNP-1 like RNA-binding protein [Spirochaeta thermophila DSM 6578]
Length = 100
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 7/72 (9%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANSLGQIMAINGV 111
I+VG L+ T++ LRQ F QYGE+ SVKI KG GFV+ A+ AI+ +
Sbjct: 5 IYVGNLNYQTTEDTLRQLFEQYGEVESVKIITDRDSGFSKGFGFVEMASEEAGEAAISAL 64
Query: 112 G-HTMEGKFMMV 122
H +EG+ + V
Sbjct: 65 NQHELEGRQLRV 76
>gi|149729916|ref|XP_001493107.1| PREDICTED: u2 snRNP-associated SURP motif-containing protein [Equus
caballus]
Length = 1029
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
+ASVKI + CGFV F N A+ + M F M +G
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLG 351
>gi|122937227|ref|NP_001073884.1| U2 snRNP-associated SURP motif-containing protein [Homo sapiens]
gi|301762984|ref|XP_002916912.1| PREDICTED: u2-associated protein SR140-like [Ailuropoda
melanoleuca]
gi|397512450|ref|XP_003826558.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein [Pan
paniscus]
gi|402861319|ref|XP_003895045.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein [Papio
anubis]
gi|403278804|ref|XP_003930975.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein
[Saimiri boliviensis boliviensis]
gi|147668553|sp|O15042.2|SR140_HUMAN RecName: Full=U2 snRNP-associated SURP motif-containing protein;
AltName: Full=140 kDa Ser/Arg-rich domain protein;
AltName: Full=U2-associated protein SR140
gi|168267304|dbj|BAG09708.1| U2-associated protein SR140 [synthetic construct]
gi|387273401|gb|AFJ70195.1| U2 snRNP-associated SURP motif-containing protein [Macaca mulatta]
Length = 1029
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
+ASVKI + CGFV F N A+ + M F M +G
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLG 351
>gi|449509637|ref|XP_002195693.2| PREDICTED: U2 snRNP-associated SURP motif-containing protein
[Taeniopygia guttata]
Length = 961
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 173 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 230
Query: 82 IASVKI---------PVGKGCGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
+ASVKI + CGFV F N A+ + M F M +G
Sbjct: 231 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLG 282
>gi|426342412|ref|XP_004037839.1| PREDICTED: LOW QUALITY PROTEIN: U2 snRNP-associated SURP
motif-containing protein [Gorilla gorilla gorilla]
Length = 1037
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
+ASVKI + CGFV F N A+ + M F M +G
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLG 351
>gi|383851135|ref|XP_003701095.1| PREDICTED: RNA-binding protein squid-like isoform 2 [Megachile
rotundata]
Length = 362
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 51/107 (47%), Gaps = 14/107 (13%)
Query: 35 GGYASNGAPGQGPQSEG---DSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG 90
G A NG Q +S G DS N +FVGGL TD++LR F YG+I S+ +
Sbjct: 29 GDAAENGQESQEDRSTGGNQDSLNDRKLFVGGLSWETTDKELRDHFGTYGDIESINVKTD 88
Query: 91 ------KGCGFVQF--ANSLGQIMAINGVGHTMEGKFMMVMGMLFRH 129
+G F+ F A SL +IM+ N H + GK + RH
Sbjct: 89 PNTGRSRGFAFIVFAKAESLDKIMSAN--DHIINGKKVDPKKAKARH 133
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK 91
IFVGGL ++DED++ FSQ+G I V++P K
Sbjct: 136 IFVGGLSTELSDEDIKNFFSQFGTIVDVEMPFDK 169
>gi|332232395|ref|XP_003265391.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein
[Nomascus leucogenys]
Length = 1029
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
+ASVKI + CGFV F N A+ + M F M +G
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLG 351
>gi|297286711|ref|XP_001107114.2| PREDICTED: u2-associated protein SR140-like [Macaca mulatta]
Length = 1029
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
+ASVKI + CGFV F N A+ + M F M +G
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLG 351
>gi|348503420|ref|XP_003439262.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein
[Oreochromis niloticus]
Length = 972
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 11/92 (11%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKG 92
APG GD S T +++G ++P + +E L Q F +YG +ASVKI +
Sbjct: 198 APGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRYGPLASVKIMWPRTDEERARERN 255
Query: 93 CGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
CGFV F N A+ + M F M +G
Sbjct: 256 CGFVAFMNRRDAERALKNLNGKMIMNFEMKLG 287
>gi|449278574|gb|EMC86385.1| U2-associated protein SR140 [Columba livia]
Length = 965
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 177 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 234
Query: 82 IASVKI---------PVGKGCGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
+ASVKI + CGFV F N A+ + M F M +G
Sbjct: 235 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLG 286
>gi|449673467|ref|XP_002159702.2| PREDICTED: nucleolysin TIAR-like [Hydra magnipapillata]
Length = 352
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 15/113 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ EM+G +R ++ AT ++ ++Q + GA + NTT++
Sbjct: 165 IREMHGAMLKTRAIKTNWATRNQNQKKEEQDYDE---VYKGAS---------ADNTTVYA 212
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF---ANSLGQIMAING 110
GG+ N T+E +R F YG+I V+I K F++F AN+ I NG
Sbjct: 213 GGIPSNCTEEQIRSHFDDYGKIVDVRIFAAKNYAFIKFDTHANAATAICKSNG 265
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 9/71 (12%)
Query: 36 GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PV--- 89
+A+N +P P+ G S +I+ G LD + +EDL+ F +GEI ++K+ PV
Sbjct: 90 NWATN-SPNGMPKVIGTS--VSIYCGNLDDTIDEEDLKAAFEVFGEILNIKVVRDPVTNH 146
Query: 90 GKGCGFVQFAN 100
K F+ F N
Sbjct: 147 SKNIAFISFTN 157
>gi|405969462|gb|EKC34433.1| hypothetical protein CGI_10025795 [Crassostrea gigas]
Length = 2718
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 13/89 (14%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
GP D + T I+VG ++P +T+ +L + F ++G +ASVKI G+ CGFV
Sbjct: 1191 GPYDPVDETTTNIYVGNINPKMTEPELCEIFGRFGPLASVKIMWPRTDEERSRGRNCGFV 1250
Query: 97 QFANSLGQIMAINGVGHTMEGKFMMVMGM 125
F N A+N ++GK +M M
Sbjct: 1251 AFMNRKDGERALNA----LKGKDIMQYEM 1275
>gi|354466181|ref|XP_003495553.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
[Cricetulus griseus]
Length = 919
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDVPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
+ASVKI + CGFV F N A+ + M F M +G
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLG 351
>gi|167377342|ref|XP_001734363.1| nucleolar protein [Entamoeba dispar SAW760]
gi|165904154|gb|EDR29480.1| nucleolar protein, putative [Entamoeba dispar SAW760]
Length = 422
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANSLGQIMAING 110
TIFVG L + +E LR FS+ GEI SVKI +G+G GFV F N +N
Sbjct: 291 TIFVGNLPFKMEEEQLRHFFSKVGEIESVKIVRESKSGMGRGIGFVTFTNKEDVQKGLNM 350
Query: 111 VGHTMEGKFMMV 122
VG ++G+ + V
Sbjct: 351 VGEKIKGRQIRV 362
>gi|242777340|ref|XP_002479014.1| RNP domain protein [Talaromyces stipitatus ATCC 10500]
gi|218722633|gb|EED22051.1| RNP domain protein [Talaromyces stipitatus ATCC 10500]
Length = 381
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 10/98 (10%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANSLG 103
E D ++ +FVG L VTD+ L++ FS+Y I ++ KG GFV F++
Sbjct: 246 EWDPAHFRLFVGNLAGEVTDDSLKKAFSRYPSIQKARVIRDKRTEKSKGYGFVSFSDGDD 305
Query: 104 QIMAINGVGHTMEGKFMMVMGMLFRHQMTQACTLQQLR 141
A M+GK++ +L R MT+ +Q R
Sbjct: 306 YFKA----AREMQGKYIGSHPVLLRRAMTEVRPVQDKR 339
>gi|224067689|ref|XP_002198708.1| PREDICTED: pre-mRNA-splicing factor RBM22 [Taeniopygia guttata]
Length = 420
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA
Sbjct: 228 DKTITTLYVGGLGDTITESDLRNHFYQFGEIRTITVVQRQQCAFIQFA 275
>gi|168027976|ref|XP_001766505.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682414|gb|EDQ68833.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 474
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 44/83 (53%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
D S T++VGGL VT+EDL+ F YGEI S+++ + C FV + G A + +
Sbjct: 224 DMSIKTLYVGGLVDRVTEEDLKDQFYGYGEIESIRMVPQRACAFVTYTTREGAEKAADHL 283
Query: 112 GHTMEGKFMMVMGMLFRHQMTQA 134
+ + + + M R Q+ +A
Sbjct: 284 ANKLVINGLRLKLMWGRPQVAKA 306
>gi|356565743|ref|XP_003551097.1| PREDICTED: nucleolysin TIAR-like [Glycine max]
Length = 411
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 10/118 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYA--SNGAPGQGPQSEGDSS---- 54
+ ++ G + SR +R AT S+ ++Q S +NG+ G ++ D +
Sbjct: 189 INDLTGKWLGSRQIRCNWATKGASASDEKQTSDSRSVVELTNGSSEDGQETTNDDTPEKN 248
Query: 55 --NTTIFVGGLDPNVTDEDLRQPFSQY--GEIASVKIPVGKGCGFVQFANSLGQIMAI 108
TT++VG L P VT DL Q F G I V++ KG GFV+++ +AI
Sbjct: 249 PQYTTVYVGNLAPEVTSVDLHQHFHSLNAGTIEDVRVQRDKGFGFVRYSTHAEAALAI 306
Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 35/79 (44%), Gaps = 10/79 (12%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANS 101
Q E S + IFVG L P VTD L FS Y + ++ +G GFV F N
Sbjct: 123 QREDTSGHFNIFVGDLSPEVTDATLYACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQ 182
Query: 102 LGQIMAINGVGHTMEGKFM 120
AIN + GK++
Sbjct: 183 QDAQSAIND----LTGKWL 197
>gi|432119575|gb|ELK38536.1| U2 snRNP-associated SURP motif-containing protein [Myotis davidii]
Length = 1052
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 264 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 321
Query: 82 IASVKI---------PVGKGCGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
+ASVKI + CGFV F N A+ + M F M +G
Sbjct: 322 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLG 373
>gi|363737140|ref|XP_422593.3| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
[Gallus gallus]
Length = 1020
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 235 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 292
Query: 82 IASVKI---------PVGKGCGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
+ASVKI + CGFV F N A+ + M F M +G
Sbjct: 293 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLG 344
>gi|330812809|ref|XP_003291310.1| hypothetical protein DICPUDRAFT_38760 [Dictyostelium purpureum]
gi|325078525|gb|EGC32172.1| hypothetical protein DICPUDRAFT_38760 [Dictyostelium purpureum]
Length = 587
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSL 102
P Q E + N +++G + P+VT E L+Q F Q+G + +++I VG+GC FV F
Sbjct: 208 PPHHLQEEVPTKN--LWLGNIGPSVTSETLKQLFDQFGNVDNIRILVGRGCAFVNFFTVE 265
Query: 103 GQIMAINGVGHTM 115
I A N + TM
Sbjct: 266 SAIAARNNLTGTM 278
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 40/86 (46%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
++ S YQ Y ++ P + ++ G + P+ +++++R FSQ+G
Sbjct: 83 QQQSSYQSHTQPPPPYNNSLPPHLQGSGKPTEPTKIVWAGNVHPDSSEDEIRGLFSQFGY 142
Query: 82 IASVKIPVGKGCGFVQFANSLGQIMA 107
I ++KI K C F+ F + I A
Sbjct: 143 IQAIKIIPAKQCAFITFGDVNAAIAA 168
>gi|345485141|ref|XP_001605146.2| PREDICTED: CUGBP Elav-like family member 2 [Nasonia vitripennis]
Length = 733
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 6/77 (7%)
Query: 47 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV----GKGCGFVQFANSL 102
P + S+ +FVG L T+ D+R F YGEI + KGC FV FA+
Sbjct: 281 PADSENRSHRKLFVGMLSKKFTENDVRNMFDVYGEIEECSVLRENGQSKGCAFVTFASKQ 340
Query: 103 GQIMAINGVGH--TMEG 117
++AI + H TMEG
Sbjct: 341 SAVLAIKALHHSQTMEG 357
>gi|317419983|emb|CBN82019.1| U2-associated protein SR140 [Dicentrarchus labrax]
Length = 965
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 11/92 (11%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKG 92
APG GD S T +++G ++P + +E L Q F +YG +ASVKI +
Sbjct: 191 APGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRYGPLASVKIMWPRTDEERARERN 248
Query: 93 CGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
CGFV F N A+ + M F M +G
Sbjct: 249 CGFVAFMNRRDAERALKNLNGKMIMNFEMKLG 280
>gi|308493359|ref|XP_003108869.1| hypothetical protein CRE_11982 [Caenorhabditis remanei]
gi|308247426|gb|EFO91378.1| hypothetical protein CRE_11982 [Caenorhabditis remanei]
Length = 404
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 57/108 (52%), Gaps = 8/108 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +MNG + R +R AT + G Q++ + Y Q+ GD NT+++V
Sbjct: 191 IEQMNGQWLGRRTIRTNWAT--RKPGDQEKPTH---YNEKSFDEIYNQTSGD--NTSVYV 243
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
G + N++++++RQ F+ YG I+ V+I +G FV+F N AI
Sbjct: 244 GNI-ANLSEDEIRQAFASYGRISEVRIFKMQGYAFVKFDNKDAAAKAI 290
Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFV 96
PGQ P + + +FVG L V ++ LR+ F +G+++ K+ KG GFV
Sbjct: 120 PGQQPSKVDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFV 179
Query: 97 QF 98
+
Sbjct: 180 SY 181
>gi|256075299|ref|XP_002573957.1| rna binding motif protein [Schistosoma mansoni]
gi|360044844|emb|CCD82392.1| putative rna binding motif protein [Schistosoma mansoni]
Length = 425
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 33/48 (68%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D + TT+++GG+ +T++DLR F Q+GE+ SV + + C F+QFA
Sbjct: 244 DRTITTLYIGGIPDGMTEKDLRNHFYQFGELRSVNLHAKQHCAFIQFA 291
>gi|428180523|gb|EKX49390.1| hypothetical protein GUITHDRAFT_68106 [Guillardia theta CCMP2712]
Length = 176
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANSLGQIMA 107
S T IF+G L V EDLRQ F Q+G I V +PV K CGFV+F + A
Sbjct: 88 SKTKIFIGRLGDAVEPEDLRQYFEQFGAITDVFMPVHHATGKRKNCGFVEFQDPSSASQA 147
Query: 108 INGVGHTMEG 117
+ H ++G
Sbjct: 148 LEQPKHVIKG 157
>gi|71043848|ref|NP_001020847.1| pre-mRNA-splicing factor RBM22 [Rattus norvegicus]
gi|81907895|sp|Q4V7D7.1|RBM22_RAT RecName: Full=Pre-mRNA-splicing factor RBM22; AltName:
Full=RNA-binding motif protein 22
gi|66910908|gb|AAH97991.1| RNA binding motif protein 22 [Rattus norvegicus]
Length = 420
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D + TT++VGGL +T+ DLR F Q+GEI +V + + C F+QFA
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTVTVVQRQQCAFIQFA 275
>gi|15227567|ref|NP_180518.1| zinc finger CCCH domain-containing protein 25 [Arabidopsis
thaliana]
gi|75339110|sp|Q9ZW36.1|C3H25_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 25;
Short=AtC3H25
gi|16226863|gb|AAL16284.1|AF428354_1 At2g29580/F16P2.4 [Arabidopsis thaliana]
gi|3980378|gb|AAC95181.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|27363236|gb|AAO11537.1| At2g29580/F16P2.4 [Arabidopsis thaliana]
gi|330253181|gb|AEC08275.1| zinc finger CCCH domain-containing protein 25 [Arabidopsis
thaliana]
Length = 483
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF--------- 98
+S D S T++VGGL+ V ++D+R F +GEI S++I K C FV +
Sbjct: 220 ESPEDQSIRTLYVGGLNSRVLEQDIRDQFYAHGEIESIRILAEKACAFVTYTTREGAEKA 279
Query: 99 ANSLGQIMAING 110
A L + +NG
Sbjct: 280 AEELSNRLVVNG 291
>gi|387018642|gb|AFJ51439.1| pre-mRNA-splicing factor RBM22-like [Crotalus adamanteus]
Length = 421
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA
Sbjct: 228 DKTITTLYVGGLGDTITESDLRNHFYQFGEIRTITVVQRQQCAFIQFA 275
>gi|432114097|gb|ELK36142.1| Pre-mRNA-splicing factor RBM22 [Myotis davidii]
Length = 384
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA
Sbjct: 228 DRTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFA 275
>gi|326928574|ref|XP_003210452.1| PREDICTED: pre-mRNA-splicing factor RBM22-like [Meleagris
gallopavo]
Length = 420
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA
Sbjct: 228 DKTITTLYVGGLGDTITESDLRNHFYQFGEIRTITVVQRQQCAFIQFA 275
>gi|213401557|ref|XP_002171551.1| gar2 [Schizosaccharomyces japonicus yFS275]
gi|211999598|gb|EEB05258.1| gar2 [Schizosaccharomyces japonicus yFS275]
Length = 449
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 56/116 (48%), Gaps = 21/116 (18%)
Query: 12 RPMRIGAATPR---KSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVT 68
R + + +TPR ++G+ QQ ASN Q P S+ T+F+G L N T
Sbjct: 275 RMVNLDISTPRPAQNNNGFAQQR------ASNFGDKQSPPSD------TVFIGNLSFNAT 322
Query: 69 DEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANSLGQIMAINGVGHTMEGK 118
++D+R FS GEI SV++P KG G+V F + + GH + G+
Sbjct: 323 EDDVRNAFSSCGEIQSVRLPTDMNSGRPKGFGYVTFDSIDAAKQCVEMNGHFIAGR 378
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 11/84 (13%)
Query: 38 ASNGAPGQGPQSEGDSSN---TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV----- 89
A + + Q PQ S + T+FVG L NV DE L + F +YG + + ++ +
Sbjct: 185 ADDESEEQKPQKAAKSESGESCTVFVGRLSWNVDDEWLGKEFEEYGTVVNARVIMDGQSG 244
Query: 90 -GKGCGFVQFAN--SLGQIMAING 110
KG G+V F + + +A+NG
Sbjct: 245 RSKGFGYVDFDSPEAAKAAVAVNG 268
>gi|326925891|ref|XP_003209141.1| PREDICTED: u2-associated protein SR140-like [Meleagris gallopavo]
Length = 1036
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 248 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 305
Query: 82 IASVKI---------PVGKGCGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
+ASVKI + CGFV F N A+ + M F M +G
Sbjct: 306 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLG 357
>gi|297850132|ref|XP_002892947.1| hypothetical protein ARALYDRAFT_889143 [Arabidopsis lyrata subsp.
lyrata]
gi|297338789|gb|EFH69206.1| hypothetical protein ARALYDRAFT_889143 [Arabidopsis lyrata subsp.
lyrata]
Length = 419
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 59/121 (48%), Gaps = 14/121 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ-------GGYASNGAP---GQGPQSE 50
+ E+ G + SR +R AT +SG +Q S G + +G G+ P E
Sbjct: 197 IDEITGKWLGSRQIRCNWATKGATSGEDKQSSDSKSVVELTSGVSEDGKDTTNGEAP--E 254
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE--IASVKIPVGKGCGFVQFANSLGQIMAI 108
++ TT++VG L P V+ DL + F G I V++ KG GFV+++ + +AI
Sbjct: 255 NNAQYTTVYVGNLAPEVSQVDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHVEAALAI 314
Query: 109 N 109
+
Sbjct: 315 S 315
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANS 101
Q E SS+ IFVG L P VTD L FS Y + ++ +G GFV F N
Sbjct: 131 QREDTSSHFNIFVGDLSPEVTDAMLFNCFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQ 190
Query: 102 LGQIMAINGV 111
AI+ +
Sbjct: 191 QDAQTAIDEI 200
>gi|324509922|gb|ADY44154.1| Pre-mRNA-splicing factor RBM22 [Ascaris suum]
Length = 412
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 48 QSEGDSSNTTIFVGGLDP--NVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF 98
Q D++ TT++VG L P +T+ DLR F Q+GEI S+ + V +GC F+ F
Sbjct: 226 QPPEDTTITTLYVGDLGPAGTITEADLRDYFYQFGEIRSLNVLVSRGCAFIAF 278
>gi|18394471|ref|NP_564018.1| oligouridylate binding protein 1B [Arabidopsis thaliana]
gi|9665134|gb|AAF97318.1|AC007843_21 Putative RNA binding protein [Arabidopsis thaliana]
gi|21553830|gb|AAM62923.1| oligouridylate binding protein, putative [Arabidopsis thaliana]
gi|111074422|gb|ABH04584.1| At1g17370 [Arabidopsis thaliana]
gi|332191458|gb|AEE29579.1| oligouridylate binding protein 1B [Arabidopsis thaliana]
Length = 419
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 14/120 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ-------GGYASNGAP---GQGPQSE 50
+ E+ G + SR +R AT +SG +Q S G + +G G+ P E
Sbjct: 197 IDEITGKWLGSRQIRCNWATKGATSGEDKQSSDSKSVVELTSGVSEDGKDTTNGEAP--E 254
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE--IASVKIPVGKGCGFVQFANSLGQIMAI 108
++ TT++VG L P V+ DL + F G I V++ KG GFV+++ + +AI
Sbjct: 255 NNAQYTTVYVGNLAPEVSQVDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHVEAALAI 314
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANS 101
Q E SS+ IFVG L P VTD L FS Y + ++ +G GFV F N
Sbjct: 131 QREDTSSHFNIFVGDLSPEVTDAMLFTCFSVYPTCSDARVMWDQKTGRSRGFGFVSFRNQ 190
Query: 102 LGQIMAINGV 111
AI+ +
Sbjct: 191 QDAQTAIDEI 200
>gi|194754789|ref|XP_001959677.1| GF11923 [Drosophila ananassae]
gi|190620975|gb|EDV36499.1| GF11923 [Drosophila ananassae]
Length = 963
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 9/73 (12%)
Query: 35 GGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------- 87
G ++N A G GD + T +++G L+P ++++ L + F +YG +AS+KI
Sbjct: 201 GSKSANNARDSGSFDTGDPNTTNLYLGNLNPKISEQQLMEIFGRYGPLASIKIMWPRSEE 260
Query: 88 --PVGKGCGFVQF 98
G+ CGFV +
Sbjct: 261 EKQRGRNCGFVAY 273
>gi|452843602|gb|EME45537.1| hypothetical protein DOTSEDRAFT_43848 [Dothistroma septosporum
NZE10]
Length = 829
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 32/65 (49%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEG 117
+++G LD T++ LRQ F +YGEI V K C FV F N I AI V E
Sbjct: 515 VYIGNLDETWTEDRLRQDFQEYGEIELVNTLREKSCAFVNFTNIANAIKAIEAVRGKEEY 574
Query: 118 KFMMV 122
K V
Sbjct: 575 KRFKV 579
>gi|5007080|gb|AAD37807.1| poly(A)-binding protein [Oryza sativa]
Length = 183
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 19/155 (12%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDS-SNTTIF 59
+ E+NG + +G A +K SG + + + + N Q D NT ++
Sbjct: 3 VQELNGKKFDDKEWYVGRA--QKKSGREMELKEK--FEKNL------QEAADKYQNTNLY 52
Query: 60 VGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFANSLGQIMAINGVGHT 114
+ LD +V D+ LR+ F++YG I S K+ V +G GFV F ++ A+ +
Sbjct: 53 LKNLDDSVDDDKLRELFAEYGTITSCKVMRDSNGVSRGSGFVAFKSAEDASRALAEMNSK 112
Query: 115 MEGKFMMVMGMLFRHQMTQA---CTLQQLRPMGLT 146
M G + + + R + +A QLRP+ L
Sbjct: 113 MVGSKPLYVALAQRKEDRKARLQAQFSQLRPVPLA 147
>gi|341903554|gb|EGT59489.1| CBN-TIAR-3 protein [Caenorhabditis brenneri]
Length = 417
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 14/110 (12%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGL 63
MNG + R +R A + S + + + + + S A NT+++VG +
Sbjct: 253 MNGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKA-----------DNTSVYVGNI 301
Query: 64 DPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN---SLGQIMAING 110
TD DLR FS YG+IA V++ + FV++ + IM +NG
Sbjct: 302 SQQTTDADLRDSFSTYGDIAEVRVFKTQRYAFVRYDKKECATKAIMEMNG 351
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 10/74 (13%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANSLGQIM 106
S + +FVG L +V+++ L+ F +YGE++ K+ KG GFV F N
Sbjct: 189 SKHFHVFVGDLSKDVSNDLLKSTFQKYGEVSEAKVIRDAQTQKSKGYGFVSFPNKQNAEN 248
Query: 107 AINGVGHTMEGKFM 120
AI G M GK++
Sbjct: 249 AIAG----MNGKWI 258
>gi|57525003|ref|NP_001006151.1| pre-mRNA-splicing factor RBM22 [Gallus gallus]
gi|82233932|sp|Q5ZM16.1|RBM22_CHICK RecName: Full=Pre-mRNA-splicing factor RBM22; AltName:
Full=RNA-binding motif protein 22
gi|53127796|emb|CAG31227.1| hypothetical protein RCJMB04_3g16 [Gallus gallus]
Length = 420
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA
Sbjct: 228 DKTITTLYVGGLGDTITESDLRNHFYQFGEIRTITVVQRQQCAFIQFA 275
>gi|334311193|ref|XP_003339587.1| PREDICTED: pre-mRNA-splicing factor RBM22-like [Monodelphis
domestica]
Length = 422
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMA 107
D + TT++VGGL +++ DLR F Q+GEI ++ + + C F+QFA MA
Sbjct: 228 DKTITTLYVGGLGDTISEADLRNHFYQFGEIRTITVVQRQHCAFIQFATRQAAEMA 283
>gi|158828226|gb|ABW81104.1| unknown [Cleome spinosa]
Length = 504
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLG 103
++ D S T++VGGL+ + ++D+R F YGEI S++I K C FV + G
Sbjct: 220 EAPEDESIKTLYVGGLNSRILEQDIRDQFYAYGEIESIRILPEKACAFVTYTTREG 275
>gi|432961306|ref|XP_004086601.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like [Oryzias
latipes]
Length = 300
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 7/104 (6%)
Query: 45 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI----PVGK--GCGFVQF 98
Q +SE IFVGGL ++ ++DL FSQ+GE+ + +I GK G GFV F
Sbjct: 86 QTDESEARDKVKKIFVGGLKNDIQEDDLTDYFSQFGEVENSEIMSEKETGKKRGFGFVHF 145
Query: 99 ANSLGQIMAINGVGHTMEGKFMMVMGMLFRHQMTQACTLQQLRP 142
+ MA+ HT+ G + V + + +M QA + ++ P
Sbjct: 146 TDHYAADMAVAVPFHTVNGHRVEVKKAVPKQEM-QAPSRIRMTP 188
>gi|221504135|gb|EEE29812.1| RRM / zinc finger (CCCH type) domain-containing protein [Toxoplasma
gondii VEG]
Length = 400
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
D++NTT+FVGGL VT++DLR F +GE+ S+K+ G+ F+ +A
Sbjct: 228 ADTTNTTVFVGGLTKGVTEQDLRDAFYAFGELLSIKMYRGQQFAFLCYAE 277
>gi|308477515|ref|XP_003100971.1| CRE-SQD-1 protein [Caenorhabditis remanei]
gi|308264315|gb|EFP08268.1| CRE-SQD-1 protein [Caenorhabditis remanei]
Length = 334
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 7/97 (7%)
Query: 36 GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------ 89
G AS G ++G+ + IFVGG+ P V +EDL F+QYGE++ ++
Sbjct: 10 GNASETIKENGHSTKGNE-DKKIFVGGISPEVNNEDLSSHFTQYGEVSQAQVKYDRTNGR 68
Query: 90 GKGCGFVQFANSLGQIMAINGVGHTMEGKFMMVMGML 126
+G FV+F G +A+ T++GK + + L
Sbjct: 69 SRGFAFVEFTTGEGCKLALAAREQTIKGKSVSINFFL 105
>gi|295669981|ref|XP_002795538.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284623|gb|EEH40189.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 823
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 32/65 (49%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEG 117
+++G LD T+E LRQ FS YGEI V K C FV F N I AI + E
Sbjct: 498 VYIGNLDETWTEERLRQDFSSYGEIELVNALREKSCAFVNFTNIANAIKAIEAMRSRDEY 557
Query: 118 KFMMV 122
K +
Sbjct: 558 KRFKI 562
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 41 GAPGQGP-------QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
G P Q P Q G S N +++G L +VT+E+LR+ ++G I ++KI K
Sbjct: 251 GKPSQVPTSVSLAVQQSGASRN--VYLGNLAEDVTEEELREDLGKFGPIDTIKIVKEKSI 308
Query: 94 GFVQFANSLGQIMAI 108
GFV F + I A+
Sbjct: 309 GFVHFLSISNAIKAV 323
>gi|237840441|ref|XP_002369518.1| RRM / zinc finger (CCCH type) domain-containing protein [Toxoplasma
gondii ME49]
gi|211967182|gb|EEB02378.1| RRM / zinc finger (CCCH type) domain-containing protein [Toxoplasma
gondii ME49]
gi|221483211|gb|EEE21535.1| lysine-specific histone demethylase, putative [Toxoplasma gondii
GT1]
Length = 400
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
D++NTT+FVGGL VT++DLR F +GE+ S+K+ G+ F+ +A
Sbjct: 228 ADTTNTTVFVGGLTKGVTEQDLRDAFYAFGELLSIKMYRGQQFAFLCYAE 277
>gi|170592088|ref|XP_001900801.1| RNA recognition motif. [Brugia malayi]
gi|158591668|gb|EDP30272.1| RNA recognition motif [Brugia malayi]
Length = 421
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +MNG + R +R AT RK +G + G Y + ++ NT+++V
Sbjct: 220 IEQMNGQWLGRRTIRTNWAT-RKPTGTG---AGDGQYGRSELNYDDVYNQTGPDNTSVYV 275
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF 98
G ++ + DEDLR F ++G I V+I +G FV+F
Sbjct: 276 GNVNSSANDEDLRAAFDKFGRILEVRIFKSQGYAFVRF 313
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 40 NGAPGQGPQSEGDSS-NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKG 92
N A G Q++ D+S + +FVG L P V ++ L+ F+ +GE++ K+ KG
Sbjct: 145 NWATEPGSQAKVDTSKHFHVFVGDLSPEVDNKALKDAFAPFGEVSDAKVIRDATTLKSKG 204
Query: 93 CGFVQF 98
GFV +
Sbjct: 205 YGFVSY 210
>gi|147843908|emb|CAN83717.1| hypothetical protein VITISV_017075 [Vitis vinifera]
Length = 216
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 6/76 (7%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP----VGKGC-GFVQFANSLGQIMA 107
+ +I+VGGL N T++ +R+ F+ YG I +VKI VG C GFV F N I A
Sbjct: 4 DDDNSIYVGGLPYNATEDSIRKVFNLYGAIVAVKIINERGVGGKCYGFVTFTNPRSAIDA 63
Query: 108 INGV-GHTMEGKFMMV 122
IN + G ++G+ ++V
Sbjct: 64 INDMNGRDIDGRIVVV 79
>gi|357477847|ref|XP_003609209.1| Glycine-rich RNA-binding protein-like protein [Medicago truncatula]
gi|355510264|gb|AES91406.1| Glycine-rich RNA-binding protein-like protein [Medicago truncatula]
Length = 555
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 6/80 (7%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-----PVGKGCGFVQFANSLGQIMAIN 109
+++I+VGGL TDE +R F+ YG I VKI +GK FV F N I AIN
Sbjct: 6 DSSIYVGGLPYGATDETIRTVFNLYGAILDVKIINDQRTIGKCYCFVTFTNPRSAIDAIN 65
Query: 110 GV-GHTMEGKFMMVMGMLFR 128
+ G T+ G+ + V G+ R
Sbjct: 66 DMNGRTINGRVVKVNGVKSR 85
>gi|189204223|ref|XP_001938447.1| RNA binding domain containing protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187985546|gb|EDU51034.1| RNA binding domain containing protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 319
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 45 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFA 99
Q QS N +++G L VT + L++ FS++GE+ SVKI + +G G+V+FA
Sbjct: 118 QSRQSRNTEPNKMLYIGNLYYEVTADQLKRVFSRFGEVESVKIVYDNRGLSRGFGYVEFA 177
Query: 100 NSLGQIMAINGVG-HTMEGKFMMV 122
N AI+ + EG+ M+V
Sbjct: 178 NMADAQAAIDNLDMQVFEGRNMVV 201
>gi|355715639|gb|AES05392.1| RNA binding motif protein 22 [Mustela putorius furo]
Length = 393
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA
Sbjct: 235 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFA 282
>gi|226293882|gb|EEH49302.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 823
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 32/66 (48%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTME 116
+++G LD T+E LRQ FS YGEI V K C FV F N I AI + E
Sbjct: 497 NVYIGNLDETWTEERLRQDFSSYGEIELVNALREKSCAFVNFTNIANAIKAIEAMRSRDE 556
Query: 117 GKFMMV 122
K +
Sbjct: 557 YKRFKI 562
Score = 42.4 bits (98), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 41 GAPGQGP-------QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
G P Q P Q G S N +++G L +VT+E+LR+ ++G I ++KI K
Sbjct: 251 GKPSQVPTSVSLAVQQSGASRN--VYLGNLAEDVTEEELREDLGKFGPIDTIKIVKEKSI 308
Query: 94 GFVQFANSLGQIMAI 108
GFV F + I A+
Sbjct: 309 GFVHFLSISNAIKAV 323
>gi|327265402|ref|XP_003217497.1| PREDICTED: pre-mRNA-splicing factor RBM22-like [Anolis
carolinensis]
Length = 421
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFA 275
>gi|312086091|ref|XP_003144941.1| hypothetical protein LOAG_09365 [Loa loa]
Length = 394
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +MNG + R +R AT RK +G + G Y ++ NT+++V
Sbjct: 193 IEQMNGQWLGRRTIRTNWAT-RKPTGTG---AGDGQYGRTELNYDDVYNQTGPDNTSVYV 248
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF 98
G ++ + DEDLR F ++G I V+I +G FV+F
Sbjct: 249 GNVNSSANDEDLRAAFDKFGRILEVRIFKSQGYAFVRF 286
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 40 NGAPGQGPQSEGDSS-NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKG 92
N A G Q++ D+S + +FVG L P V ++ L+ F+ +GE++ K+ KG
Sbjct: 118 NWATEPGSQAKVDTSKHFHVFVGDLSPEVDNKALKDAFAPFGEVSDAKVIRDATTLKSKG 177
Query: 93 CGFVQF 98
GFV +
Sbjct: 178 YGFVSY 183
>gi|383851133|ref|XP_003701094.1| PREDICTED: RNA-binding protein squid-like isoform 1 [Megachile
rotundata]
Length = 338
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 51/107 (47%), Gaps = 14/107 (13%)
Query: 35 GGYASNGAPGQGPQSEG---DSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG 90
G A NG Q +S G DS N +FVGGL TD++LR F YG+I S+ +
Sbjct: 29 GDAAENGQESQEDRSTGGNQDSLNDRKLFVGGLSWETTDKELRDHFGTYGDIESINVKTD 88
Query: 91 ------KGCGFVQF--ANSLGQIMAINGVGHTMEGKFMMVMGMLFRH 129
+G F+ F A SL +IM+ N H + GK + RH
Sbjct: 89 PNTGRSRGFAFIVFAKAESLDKIMSAN--DHIINGKKVDPKKAKARH 133
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK 91
IFVGGL ++DED++ FSQ+G I V++P K
Sbjct: 136 IFVGGLSTELSDEDIKNFFSQFGTIVDVEMPFDK 169
>gi|340378631|ref|XP_003387831.1| PREDICTED: putative RNA-binding protein 15B-like [Amphimedon
queenslandica]
Length = 904
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 52 DSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANSLGQIM 106
DS+ T T+FVG L+ +VT+ +LR FSQYG I SV I + K G F++F I
Sbjct: 319 DSNATRTLFVGNLELDVTERELRDLFSQYGRIESVDIKLAKSAGTSYSFIKFTTITDAIN 378
Query: 107 AINGVGHTMEGKFMMVMG 124
A N + + G F + +G
Sbjct: 379 AKNEMHGHLFGTFRLKIG 396
>gi|417400642|gb|JAA47250.1| Putative pre-mrna-splicing factor rbm22 [Desmodus rotundus]
Length = 420
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFA 275
>gi|308448944|ref|XP_003087804.1| hypothetical protein CRE_15246 [Caenorhabditis remanei]
gi|308252629|gb|EFO96581.1| hypothetical protein CRE_15246 [Caenorhabditis remanei]
Length = 275
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 6/76 (7%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANSLGQIM 106
+ + IFVGG+ P V +EDL F+QYGE++ ++ +G FV+F G +
Sbjct: 26 NEDKKIFVGGISPEVNNEDLSSHFTQYGEVSQAQVKYDRTNGRSRGFAFVEFTTGEGCKL 85
Query: 107 AINGVGHTMEGKFMMV 122
A+ T++GK + V
Sbjct: 86 ALAAREQTIKGKSVEV 101
>gi|403412253|emb|CCL98953.1| predicted protein [Fibroporia radiculosa]
Length = 1287
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 47 PQSEGDSSNTT----IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSL 102
P+SEG + T +++G LD +VT E L F+ YG I S+++ K CGFV F +
Sbjct: 428 PKSEGSTQMQTPTRSLWIGNLDSSVTSEQLIHVFAPYGAIESLRLLPEKECGFVNFVDQA 487
Query: 103 GQIMAINGVGHTMEGKFMMVMGMLFR 128
I A V + + G M G R
Sbjct: 488 DAIRAKEDVLNRLGGDIGMPNGQTVR 513
>gi|393909208|gb|EFO19127.2| hypothetical protein LOAG_09365 [Loa loa]
Length = 421
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +MNG + R +R AT RK +G + G Y ++ NT+++V
Sbjct: 220 IEQMNGQWLGRRTIRTNWAT-RKPTGTG---AGDGQYGRTELNYDDVYNQTGPDNTSVYV 275
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF 98
G ++ + DEDLR F ++G I V+I +G FV+F
Sbjct: 276 GNVNSSANDEDLRAAFDKFGRILEVRIFKSQGYAFVRF 313
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 40 NGAPGQGPQSEGDSS-NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKG 92
N A G Q++ D+S + +FVG L P V ++ L+ F+ +GE++ K+ KG
Sbjct: 145 NWATEPGSQAKVDTSKHFHVFVGDLSPEVDNKALKDAFAPFGEVSDAKVIRDATTLKSKG 204
Query: 93 CGFVQF 98
GFV +
Sbjct: 205 YGFVSY 210
>gi|355750335|gb|EHH54673.1| hypothetical protein EGM_15557 [Macaca fascicularis]
Length = 421
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA
Sbjct: 229 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFA 276
>gi|225684259|gb|EEH22543.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 823
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 32/66 (48%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTME 116
+++G LD T+E LRQ FS YGEI V K C FV F N I AI + E
Sbjct: 497 NVYIGNLDETWTEERLRQDFSSYGEIELVNALREKSCAFVNFTNIANAIKAIEAMRSRDE 556
Query: 117 GKFMMV 122
K +
Sbjct: 557 YKRFKI 562
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 41 GAPGQGP-------QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
G P Q P Q G S N +++G L +VT+E+LR+ ++G I ++KI K
Sbjct: 251 GKPSQVPTSVSLAVQQSGASRN--VYLGNLAEDVTEEELREDLGKFGPIDTIKIVKEKSI 308
Query: 94 GFVQFANSLGQIMAI 108
GFV F + I A+
Sbjct: 309 GFVHFLSISNAIKAV 323
>gi|255576617|ref|XP_002529199.1| nucleolysin tia-1, putative [Ricinus communis]
gi|223531377|gb|EEF33213.1| nucleolysin tia-1, putative [Ricinus communis]
Length = 422
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 10/118 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYA--SNGAPGQGPQS------EGD 52
+ ++ G + SR +R AT +S +Q S +NG+ +G ++ E +
Sbjct: 196 INDLTGKWLGSRQIRCNWATKGATSNDDKQSSDAKSVVELTNGSSEEGKETANNDAPENN 255
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGE--IASVKIPVGKGCGFVQFANSLGQIMAI 108
TT++VG L P VT DL + F G I V++ KG GFV+F+ +AI
Sbjct: 256 PQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRFSTHAEAALAI 313
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 35/79 (44%), Gaps = 10/79 (12%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANS 101
Q E S + IFVG L P VTD L FS Y + ++ +G GFV F N
Sbjct: 130 QREDTSGHYNIFVGDLSPEVTDATLFACFSVYHSCSDARVMWDQKTGRSRGFGFVSFRNQ 189
Query: 102 LGQIMAINGVGHTMEGKFM 120
AIN + GK++
Sbjct: 190 QDAQSAIN----DLTGKWL 204
>gi|431918047|gb|ELK17275.1| Pre-mRNA-splicing factor RBM22 [Pteropus alecto]
gi|440904796|gb|ELR55260.1| Pre-mRNA-splicing factor RBM22 [Bos grunniens mutus]
Length = 424
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA
Sbjct: 232 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFA 279
>gi|74195542|dbj|BAE39585.1| unnamed protein product [Mus musculus]
Length = 420
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFA 275
>gi|355691758|gb|EHH26943.1| hypothetical protein EGK_17030 [Macaca mulatta]
Length = 421
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA
Sbjct: 229 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFA 276
>gi|403285535|ref|XP_003934078.1| PREDICTED: pre-mRNA-splicing factor RBM22 [Saimiri boliviensis
boliviensis]
Length = 420
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFA 275
>gi|395817744|ref|XP_003782315.1| PREDICTED: pre-mRNA-splicing factor RBM22 [Otolemur garnettii]
Length = 406
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFA 275
>gi|8922328|ref|NP_060517.1| pre-mRNA-splicing factor RBM22 [Homo sapiens]
gi|110625591|ref|NP_080052.1| pre-mRNA-splicing factor RBM22 [Mus musculus]
gi|383873093|ref|NP_001244425.1| pre-mRNA-splicing factor RBM22 [Macaca mulatta]
gi|73954184|ref|XP_546302.2| PREDICTED: pre-mRNA-splicing factor RBM22 [Canis lupus familiaris]
gi|114602891|ref|XP_001167240.1| PREDICTED: pre-mRNA-splicing factor RBM22 isoform 2 [Pan
troglodytes]
gi|291387642|ref|XP_002710359.1| PREDICTED: RNA binding motif protein 22 [Oryctolagus cuniculus]
gi|332235023|ref|XP_003266703.1| PREDICTED: pre-mRNA-splicing factor RBM22 [Nomascus leucogenys]
gi|344265156|ref|XP_003404652.1| PREDICTED: pre-mRNA-splicing factor RBM22-like [Loxodonta africana]
gi|348583291|ref|XP_003477406.1| PREDICTED: pre-mRNA-splicing factor RBM22 [Cavia porcellus]
gi|397517732|ref|XP_003829060.1| PREDICTED: pre-mRNA-splicing factor RBM22 [Pan paniscus]
gi|402873102|ref|XP_003900425.1| PREDICTED: pre-mRNA-splicing factor RBM22 [Papio anubis]
gi|410949463|ref|XP_003981441.1| PREDICTED: pre-mRNA-splicing factor RBM22 [Felis catus]
gi|426350648|ref|XP_004042882.1| PREDICTED: pre-mRNA-splicing factor RBM22 [Gorilla gorilla gorilla]
gi|74762758|sp|Q9NW64.1|RBM22_HUMAN RecName: Full=Pre-mRNA-splicing factor RBM22; AltName:
Full=RNA-binding motif protein 22; AltName: Full=Zinc
finger CCCH domain-containing protein 16
gi|75075716|sp|Q4R4J1.1|RBM22_MACFA RecName: Full=Pre-mRNA-splicing factor RBM22; AltName:
Full=RNA-binding motif protein 22
gi|81913160|sp|Q8BHS3.1|RBM22_MOUSE RecName: Full=Pre-mRNA-splicing factor RBM22; AltName:
Full=RNA-binding motif protein 22
gi|7022226|dbj|BAA91521.1| unnamed protein product [Homo sapiens]
gi|12053361|emb|CAB66867.1| hypothetical protein [Homo sapiens]
gi|13097297|gb|AAH03402.1| RNA binding motif protein 22 [Homo sapiens]
gi|26337089|dbj|BAC32229.1| unnamed protein product [Mus musculus]
gi|51480449|gb|AAH80205.1| RNA binding motif protein 22 [Mus musculus]
gi|60654947|gb|AAX32038.1| RNA binding motif protein 22 [synthetic construct]
gi|67971284|dbj|BAE01984.1| unnamed protein product [Macaca fascicularis]
gi|74151559|dbj|BAE38885.1| unnamed protein product [Mus musculus]
gi|74198886|dbj|BAE30665.1| unnamed protein product [Mus musculus]
gi|74212676|dbj|BAE31073.1| unnamed protein product [Mus musculus]
gi|74214020|dbj|BAE29427.1| unnamed protein product [Mus musculus]
gi|74223191|dbj|BAE40732.1| unnamed protein product [Mus musculus]
gi|117646096|emb|CAL38515.1| hypothetical protein [synthetic construct]
gi|119582115|gb|EAW61711.1| RNA binding motif protein 22, isoform CRA_b [Homo sapiens]
gi|208965472|dbj|BAG72750.1| RNA binding motif protein 22 [synthetic construct]
gi|296485163|tpg|DAA27278.1| TPA: pre-mRNA-splicing factor RBM22 [Bos taurus]
gi|380814544|gb|AFE79146.1| pre-mRNA-splicing factor RBM22 [Macaca mulatta]
gi|383419867|gb|AFH33147.1| pre-mRNA-splicing factor RBM22 [Macaca mulatta]
gi|384948134|gb|AFI37672.1| pre-mRNA-splicing factor RBM22 [Macaca mulatta]
gi|410207524|gb|JAA00981.1| RNA binding motif protein 22 [Pan troglodytes]
gi|410255988|gb|JAA15961.1| RNA binding motif protein 22 [Pan troglodytes]
gi|410291244|gb|JAA24222.1| RNA binding motif protein 22 [Pan troglodytes]
gi|410354161|gb|JAA43684.1| RNA binding motif protein 22 [Pan troglodytes]
Length = 420
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFA 275
>gi|301765526|ref|XP_002918204.1| PREDICTED: pre-mRNA-splicing factor RBM22-like [Ailuropoda
melanoleuca]
Length = 454
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA
Sbjct: 262 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFA 309
>gi|119582116|gb|EAW61712.1| RNA binding motif protein 22, isoform CRA_c [Homo sapiens]
Length = 421
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA
Sbjct: 229 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFA 276
>gi|296193255|ref|XP_002744418.1| PREDICTED: pre-mRNA-splicing factor RBM22 [Callithrix jacchus]
Length = 420
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFA 275
>gi|426229912|ref|XP_004009027.1| PREDICTED: pre-mRNA-splicing factor RBM22 isoform 1 [Ovis aries]
Length = 430
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFA 275
>gi|444723694|gb|ELW64335.1| Pre-mRNA-splicing factor RBM22 [Tupaia chinensis]
Length = 428
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA
Sbjct: 236 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFA 283
>gi|357614550|gb|EHJ69142.1| hypothetical protein KGM_18723 [Danaus plexippus]
Length = 877
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 9/65 (13%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGC 93
P G GD + T +++G L+P +T++ L + F +YG +AS+KI G+ C
Sbjct: 149 PDVGSYDTGDPNTTNLYLGNLNPKITEQQLMEIFGRYGPLASIKIMWPRSDEEKARGRNC 208
Query: 94 GFVQF 98
GFV F
Sbjct: 209 GFVAF 213
>gi|148677878|gb|EDL09825.1| mCG6024, isoform CRA_c [Mus musculus]
Length = 421
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFA 275
>gi|197098656|ref|NP_001125624.1| pre-mRNA-splicing factor RBM22 [Pongo abelii]
gi|75070751|sp|Q5RAY5.1|RBM22_PONAB RecName: Full=Pre-mRNA-splicing factor RBM22; AltName:
Full=RNA-binding motif protein 22
gi|55728671|emb|CAH91075.1| hypothetical protein [Pongo abelii]
Length = 420
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFA 275
>gi|12858161|dbj|BAB31220.1| unnamed protein product [Mus musculus]
Length = 420
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFA 275
>gi|61371511|gb|AAX43680.1| RNA binding motif protein 22 [synthetic construct]
Length = 421
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFA 275
>gi|390333471|ref|XP_794306.3| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
[Strongylocentrotus purpuratus]
Length = 1300
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 21/100 (21%)
Query: 10 SSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTD 69
+ +P +G+A+ + ++YS G GD + T IF+G ++P + +
Sbjct: 229 TPQPTSVGSASDIRLPAGIEEYS------------YGSHDYGDPNTTNIFLGSINPKMNE 276
Query: 70 EDLRQPFSQYGEIASVKI---------PVGKGCGFVQFAN 100
E L + F QYG +ASVKI + CGFV F N
Sbjct: 277 EMLCKEFVQYGPLASVKIMWPRTDAERQRNRNCGFVAFMN 316
>gi|345325652|ref|XP_003430942.1| PREDICTED: LOW QUALITY PROTEIN: U2 snRNP-associated SURP
motif-containing protein-like [Ornithorhynchus anatinus]
Length = 1079
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 342 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 399
Query: 82 IASVKI---------PVGKGCGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
+ASVKI + CGFV F N A+ + M F M +G
Sbjct: 400 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLG 451
>gi|15239676|ref|NP_200269.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|9758950|dbj|BAB09337.1| unnamed protein product [Arabidopsis thaliana]
gi|18175762|gb|AAL59923.1| unknown protein [Arabidopsis thaliana]
gi|20465513|gb|AAM20239.1| unknown protein [Arabidopsis thaliana]
gi|21553374|gb|AAM62467.1| unknown [Arabidopsis thaliana]
gi|332009129|gb|AED96512.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 156
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 32 SSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-- 89
+S+ + S A Q P +T +FV GL T E LR F+Q+GE+A K+
Sbjct: 32 ASRFSFLSPQAESQTPARPQAEPSTNLFVSGLSKRTTSEGLRTAFAQFGEVADAKVVTDR 91
Query: 90 ----GKGCGFVQFANSLGQIMAINGVGHTMEGKFM 120
KG GFV++A I G M+GKF+
Sbjct: 92 VSGYSKGFGFVRYATLEDSAKGIAG----MDGKFL 122
>gi|440639062|gb|ELR08981.1| hypothetical protein GMDG_00599 [Geomyces destructans 20631-21]
Length = 681
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
++VG LD + T++ LRQ F++YG+I V K C FV F N I AI +
Sbjct: 537 VYVGNLDESFTEDRLRQDFTEYGDIELVNTLREKSCAFVNFTNIANAIKAIEAI 590
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 9/76 (11%)
Query: 41 GAPGQGP-------QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
G P Q P Q G S N +++G L ++T+++LR+ ++G I +VKI K
Sbjct: 290 GKPSQVPTSVALAVQQSGASRN--VYLGNLSEDITEDELREDLGKFGPIDTVKIVREKAI 347
Query: 94 GFVQFANSLGQIMAIN 109
GF+ F + I A++
Sbjct: 348 GFIHFLSIGNAIKAVS 363
>gi|367049600|ref|XP_003655179.1| hypothetical protein THITE_2118569 [Thielavia terrestris NRRL 8126]
gi|347002443|gb|AEO68843.1| hypothetical protein THITE_2118569 [Thielavia terrestris NRRL 8126]
Length = 526
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 39/78 (50%)
Query: 45 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQ 104
Q P +G+ T ++ + V DEDLR S +GE+A I K C FV+F G
Sbjct: 385 QVPAPQGEKEGTMAYIKYVTDKVKDEDLRATLSSFGELAYFDINRQKNCAFVEFKTQAGY 444
Query: 105 IMAINGVGHTMEGKFMMV 122
A+ HT+ G+ ++V
Sbjct: 445 NAAVAANPHTVNGENIVV 462
>gi|432098820|gb|ELK28315.1| Pre-mRNA-splicing factor RBM22 [Myotis davidii]
Length = 385
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA
Sbjct: 193 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFA 240
>gi|338713130|ref|XP_001917686.2| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor RBM22-like
[Equus caballus]
Length = 421
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFA 275
>gi|281345654|gb|EFB21238.1| hypothetical protein PANDA_006585 [Ailuropoda melanoleuca]
Length = 376
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA
Sbjct: 184 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFA 231
>gi|83715976|ref|NP_001032907.1| pre-mRNA-splicing factor RBM22 [Bos taurus]
gi|115502617|sp|Q3B7L8.1|RBM22_BOVIN RecName: Full=Pre-mRNA-splicing factor RBM22; AltName:
Full=RNA-binding motif protein 22
gi|78174395|gb|AAI07552.1| RNA binding motif protein 22 [Bos taurus]
Length = 420
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFA 275
>gi|240274914|gb|EER38429.1| RNA-binding protein [Ajellomyces capsulatus H143]
Length = 817
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 32/65 (49%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEG 117
+++G LD T+E LRQ FS YGEI V K C FV F N I AI + E
Sbjct: 500 VYIGNLDETWTEECLRQDFSSYGEIELVNALREKSCAFVNFTNIANAIKAIEAMRSREEY 559
Query: 118 KFMMV 122
K +
Sbjct: 560 KRFKI 564
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 41 GAPGQGP-------QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
G P Q P Q G S N +++G L +VT+E+LR+ ++G I ++KI K
Sbjct: 253 GKPSQVPTSVALAVQQSGASRN--VYLGNLAEDVTEEELREDLGKFGPIDTIKIVKEKSI 310
Query: 94 GFVQFANSLGQIMAI 108
GFV F + I A+
Sbjct: 311 GFVHFLSISNAIKAV 325
>gi|47223423|emb|CAG04284.1| unnamed protein product [Tetraodon nigroviridis]
Length = 964
Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 11/92 (11%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKG 92
APG GD S T +++G ++P + +E L Q F +YG +ASVKI +
Sbjct: 183 APGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRYGPLASVKIMWPRTDEERARERN 240
Query: 93 CGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
CGFV F N A+ + M F M +G
Sbjct: 241 CGFVAFMNRRDAERALKHLNGKMIMNFEMKLG 272
>gi|401399032|ref|XP_003880458.1| hypothetical protein NCLIV_008920 [Neospora caninum Liverpool]
gi|325114868|emb|CBZ50424.1| hypothetical protein NCLIV_008920 [Neospora caninum Liverpool]
Length = 400
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
D++NTT+FVGGL VT++DLR F +GE+ S+K+ G+ F+ +A
Sbjct: 228 ADTTNTTVFVGGLTKGVTEQDLRDAFYAFGELLSIKMYRGQQYAFLCYAE 277
>gi|115466664|ref|NP_001056931.1| Os06g0170500 [Oryza sativa Japonica Group]
gi|75321585|sp|Q5SNN4.1|C3H40_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 40;
Short=OsC3H40
gi|55773636|dbj|BAD72175.1| RRM-containing RNA-binding protein-like [Oryza sativa Japonica
Group]
gi|113594971|dbj|BAF18845.1| Os06g0170500 [Oryza sativa Japonica Group]
gi|125596196|gb|EAZ35976.1| hypothetical protein OsJ_20278 [Oryza sativa Japonica Group]
gi|215767752|dbj|BAG99980.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 482
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
D S T+++GGL+ +T++DLR F +GEI S+++ + + C FV + G A +
Sbjct: 224 DESIRTLYIGGLNNRITEQDLRDQFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAEEL 283
Query: 112 GHTM 115
+ +
Sbjct: 284 ANKL 287
>gi|354488436|ref|XP_003506375.1| PREDICTED: pre-mRNA-splicing factor RBM22 [Cricetulus griseus]
Length = 431
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA
Sbjct: 239 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFA 286
>gi|126290582|ref|XP_001369324.1| PREDICTED: pre-mRNA-splicing factor RBM22 [Monodelphis domestica]
Length = 420
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMA 107
D + TT++VGGL +++ DLR F Q+GEI ++ + + C F+QFA MA
Sbjct: 228 DKTITTLYVGGLGDTISETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEMA 283
>gi|339247155|ref|XP_003375211.1| Pre-mRNA-splicing factor RBM22 [Trichinella spiralis]
gi|316971466|gb|EFV55227.1| Pre-mRNA-splicing factor RBM22 [Trichinella spiralis]
Length = 331
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 52 DSSNTTIFVGGL-DPNV-TDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMA 107
D + TTI++G + D NV T++D++ F Q+GEI S+ I KGCGFVQF +A
Sbjct: 230 DKTITTIYLGNIGDDNVITEDDIKNYFYQFGEIRSIVILSEKGCGFVQFTTREAAELA 287
>gi|45360865|ref|NP_989108.1| pre-mRNA-splicing factor RBM22 [Xenopus (Silurana) tropicalis]
gi|82237531|sp|Q6P616.1|RBM22_XENTR RecName: Full=Pre-mRNA-splicing factor RBM22; AltName:
Full=RNA-binding motif protein 22
gi|38566013|gb|AAH62518.1| RNA binding motif protein 22 [Xenopus (Silurana) tropicalis]
gi|89267971|emb|CAJ81393.1| RNA binding motif protein 5 [Xenopus (Silurana) tropicalis]
Length = 417
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMA 107
D S TT++VGGL +++ +LR F Q+GEI ++ + + C F+QFA MA
Sbjct: 228 DKSITTLYVGGLGDTISESELRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEMA 283
>gi|297792921|ref|XP_002864345.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297310180|gb|EFH40604.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 156
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 32 SSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-- 89
+S+ + S A Q P +T +FV GL T E LR F+Q+GE+A K+
Sbjct: 32 ASRFSFLSPQAESQTPARPQAEPSTNLFVSGLSKRTTSEGLRTAFAQFGEVADAKVVTDR 91
Query: 90 ----GKGCGFVQFANSLGQIMAINGVGHTMEGKFM 120
KG GFV++A I G M+GKF+
Sbjct: 92 VSGYSKGFGFVRYATLEDSAKGIAG----MDGKFL 122
>gi|45383684|ref|NP_989549.1| deleted in azoospermia-like [Gallus gallus]
gi|44887839|sp|Q804A9.1|DAZL_CHICK RecName: Full=Deleted in azoospermia-like; Short=DAZ-like protein
gi|28136293|gb|AAO26019.1| deleted azoospermia-like protein [Gallus gallus]
Length = 289
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 8/101 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFANSLGQ 104
EG T+FVGG+D + + ++R F QYG + VKI V KG GFV F +++
Sbjct: 30 EGKIMPNTVFVGGIDIRMNEAEIRSYFEQYGTVKEVKIITDRTGVSKGYGFVSFLDNVD- 88
Query: 105 IMAINGVGHTMEGKFMMVMGMLFRHQMTQACTLQQLRPMGL 145
+ I ++ GK + +G R Q C+ Q RP+
Sbjct: 89 VQKIVESQISVHGK-RLKLGPAIRKQQN-LCSYMQPRPLAF 127
>gi|449297589|gb|EMC93607.1| hypothetical protein BAUCODRAFT_76311, partial [Baudoinia
compniacensis UAMH 10762]
Length = 253
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 6/61 (9%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANSLGQIMAIN 109
+T+FVGGL NV +E L + F ++GE+AS +I KG GFV+F + G I A+
Sbjct: 1 STLFVGGLSWNVDEEWLMREFEEFGELASTRIMTDRETGKSKGFGFVEFKSVDGAIKAVE 60
Query: 110 G 110
G
Sbjct: 61 G 61
>gi|308480880|ref|XP_003102646.1| hypothetical protein CRE_03259 [Caenorhabditis remanei]
gi|308261080|gb|EFP05033.1| hypothetical protein CRE_03259 [Caenorhabditis remanei]
Length = 358
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 14/110 (12%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGL 63
MNG + R +R A + S + + + + + S A NT+++VG +
Sbjct: 194 MNGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKA-----------DNTSVYVGNI 242
Query: 64 DPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN---SLGQIMAING 110
T+ DLR+ FS YG+IA V++ + FV++ + IM +NG
Sbjct: 243 SQQTTETDLRESFSTYGDIAEVRVFKTQRYAFVRYDKKECATKAIMEMNG 292
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 10/69 (14%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANSLGQIMAINGV 111
+FVG L +V++E L+ F +YGE++ K+ KG GFV F N AI G
Sbjct: 135 VFVGDLSKDVSNELLKSTFQKYGEVSEAKVIRDAQTQKSKGYGFVSFPNKQNAENAIAG- 193
Query: 112 GHTMEGKFM 120
M GK++
Sbjct: 194 ---MNGKWI 199
>gi|395644710|ref|ZP_10432570.1| RNP-1 like RNA-binding protein [Methanofollis liminatans DSM 4140]
gi|395441450|gb|EJG06207.1| RNP-1 like RNA-binding protein [Methanofollis liminatans DSM 4140]
Length = 86
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 37/61 (60%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGH 113
++T++VG L+ T+E L + FS YG++ S +I KG GFV+FA+ A+N +
Sbjct: 2 ESSTLYVGNLNYETTEEQLSELFSAYGDVKSARIIPRKGFGFVEFASVEEAEKAMNALNE 61
Query: 114 T 114
T
Sbjct: 62 T 62
>gi|148677877|gb|EDL09824.1| mCG6024, isoform CRA_b [Mus musculus]
Length = 436
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA
Sbjct: 243 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFA 290
>gi|4096748|gb|AAC99998.1| ORF; Method: conceptual translation supplied by author [Homo
sapiens]
Length = 367
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA
Sbjct: 175 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFA 222
>gi|390354454|ref|XP_791429.3| PREDICTED: uncharacterized protein LOC586560 [Strongylocentrotus
purpuratus]
Length = 365
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 48 QSEGDSSN----TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLG 103
+S+ D SN ++++G L P VT+++L+ F YGE++S++ K C FV + +
Sbjct: 182 ESKLDYSNPENLKSLWIGNLQPTVTEKELKDLFKPYGEVSSMRRMSEKFCAFVNYKDPRM 241
Query: 104 QIMAINGV-GHTMEGKFMMV 122
A++ + G + GKF+++
Sbjct: 242 ASKAMDKLQGRELHGKFLLI 261
>gi|194384782|dbj|BAG59551.1| unnamed protein product [Homo sapiens]
Length = 371
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA
Sbjct: 179 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFA 226
>gi|351702162|gb|EHB05081.1| Pre-mRNA-splicing factor RBM22 [Heterocephalus glaber]
Length = 420
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFA 275
>gi|297804878|ref|XP_002870323.1| hypothetical protein ARALYDRAFT_493480 [Arabidopsis lyrata subsp.
lyrata]
gi|297316159|gb|EFH46582.1| hypothetical protein ARALYDRAFT_493480 [Arabidopsis lyrata subsp.
lyrata]
Length = 407
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
Query: 49 SEGDSSNTT--IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFAN 100
S GDS N T IFVGGL P +TDE+ RQ F YG + V I +G GFV F +
Sbjct: 101 SGGDSFNKTKKIFVGGLPPTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDS 160
Query: 101 SLGQIMAINGVGHTMEGKFMMVMGML 126
++ H + GK + V L
Sbjct: 161 EDAVDRVLHKTFHDLSGKQVEVKRAL 186
>gi|198461072|ref|XP_001361904.2| GA21718 [Drosophila pseudoobscura pseudoobscura]
gi|198137226|gb|EAL26483.2| GA21718 [Drosophila pseudoobscura pseudoobscura]
Length = 956
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 13/93 (13%)
Query: 38 ASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------P 88
A++ A G GD + T +++G L+P ++++ L + F +YG +AS+KI
Sbjct: 195 AASNAREVGSFDTGDPNTTNLYLGNLNPKISEQQLMETFGRYGPLASIKIMWPRSDEEKA 254
Query: 89 VGKGCGFVQFANSLGQIMAINGVGHTMEGKFMM 121
G+ CGFV + + A+ T+ G+++M
Sbjct: 255 RGRNCGFVAYMSRRDAERAL----RTLNGRYIM 283
>gi|432928337|ref|XP_004081149.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
[Oryzias latipes]
Length = 970
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 11/92 (11%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKG 92
APG GD S T +++G ++P + +E L Q F +YG +ASVKI +
Sbjct: 198 APGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRYGPLASVKIMWPRTDEERARERN 255
Query: 93 CGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
CGFV F N A+ + M F M +G
Sbjct: 256 CGFVAFMNRRDAERALKHLNGKMIMNFEMKLG 287
>gi|395504854|ref|XP_003756761.1| PREDICTED: pre-mRNA-splicing factor RBM22 [Sarcophilus harrisii]
Length = 420
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMA 107
D + TT++VGGL +++ DLR F Q+GEI ++ + + C F+QFA MA
Sbjct: 228 DKTITTLYVGGLGDTISETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEMA 283
>gi|298709098|emb|CBJ31046.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1237
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 22/103 (21%)
Query: 28 QQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI 87
Q YS Q P G +GD ++T +++G L P VT+E L++ FS +G++ S+KI
Sbjct: 217 HQMYSDQ-------TPSSGSMDDGDPTSTNLYLGNLAPTVTEEALQEAFSPFGKVYSIKI 269
Query: 88 ---------PVGKGCGFVQF------ANSLGQIMAINGVGHTM 115
+ CGF+ F N+ +M + GH M
Sbjct: 270 MWPRTDEERARKRNCGFLSFWRKEDAVNAKRAMMDTDFEGHRM 312
>gi|407036329|gb|EKE38119.1| RNA recognition motif (RRM, RBD, or RNP domain) containing protein
[Entamoeba nuttalli P19]
Length = 413
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANSLGQIMAING 110
TIFVG L + +E LR+ FS+ GEI VKI +G+G GFV F N +N
Sbjct: 282 TIFVGNLPFKMEEEQLRKLFSKAGEIERVKIVRESKSGMGRGIGFVTFTNKEDVQKGLNM 341
Query: 111 VGHTMEGKFMMV 122
VG ++G+ + V
Sbjct: 342 VGEKIKGRQIRV 353
>gi|123468140|ref|XP_001317333.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121900064|gb|EAY05110.1| hypothetical protein TVAG_108440 [Trichomonas vaginalis G3]
Length = 332
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG------FVQFANSLGQ 104
+ SN T+F+G L P VT++ LR+ FS GEI VKIP + G +V F +
Sbjct: 166 NEESNRTVFIGQLKPTVTEDMLRKLFSNAGEIDHVKIPRDRETGKSRYVAYVTFVDERSV 225
Query: 105 IMAINGVGHTMEGKFMMV 122
A+ G +E K M V
Sbjct: 226 DDALKFDGTFLEEKQMRV 243
>gi|255558830|ref|XP_002520438.1| RNA binding motif protein, putative [Ricinus communis]
gi|223540280|gb|EEF41851.1| RNA binding motif protein, putative [Ricinus communis]
Length = 285
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
D S T++VGGLD +T++DLR F +GEI S+K+ + FV + G A +
Sbjct: 42 DESIKTLYVGGLDARITEQDLRDNFYAHGEIESIKMVPQRAIAFVTYTTREGAEKAAEEL 101
Query: 112 GHTMEGKFMMVMGMLFRHQ 130
+ + K + + M R Q
Sbjct: 102 SNKLVIKGLRLKLMWGRPQ 120
>gi|449704866|gb|EMD45026.1| RNA recognition motif domain containing protein [Entamoeba
histolytica KU27]
Length = 414
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANSLGQIMAING 110
TIFVG L + +E LR+ FS+ GEI VKI +G+G GFV F N +N
Sbjct: 283 TIFVGNLPFKMEEEQLRKLFSKAGEIERVKIVRESKSGMGRGIGFVTFTNKEDVQKGLNM 342
Query: 111 VGHTMEGKFMMV 122
VG ++G+ + V
Sbjct: 343 VGEKVKGRQIRV 354
>gi|67477043|ref|XP_654040.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56471058|gb|EAL48654.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
Length = 414
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANSLGQIMAING 110
TIFVG L + +E LR+ FS+ GEI VKI +G+G GFV F N +N
Sbjct: 283 TIFVGNLPFKMEEEQLRKLFSKAGEIERVKIVRESKSGMGRGIGFVTFTNKEDVQKGLNM 342
Query: 111 VGHTMEGKFMMV 122
VG ++G+ + V
Sbjct: 343 VGEKVKGRQIRV 354
>gi|426229914|ref|XP_004009028.1| PREDICTED: pre-mRNA-splicing factor RBM22 isoform 2 [Ovis aries]
Length = 417
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFA 275
>gi|326921961|ref|XP_003207222.1| PREDICTED: deleted in azoospermia-like [Meleagris gallopavo]
Length = 291
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 8/101 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFANSLGQ 104
EG T+FVGG+D + + ++R F QYG + VKI V KG GFV F +++
Sbjct: 32 EGKIMPNTVFVGGIDIRMNEAEIRSYFEQYGTVKEVKIITDRTGVSKGYGFVSFLDNVD- 90
Query: 105 IMAINGVGHTMEGKFMMVMGMLFRHQMTQACTLQQLRPMGL 145
+ I ++ GK + +G R Q C+ Q RP+
Sbjct: 91 VQKIVESQISVHGK-RLKLGPAIRKQQN-LCSYVQPRPLAF 129
>gi|353242335|emb|CCA73988.1| related to RNA-binding proteins [Piriformospora indica DSM 11827]
Length = 274
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 7/88 (7%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG------F 95
APGQG + + IF+GGL+ +T+ D+ FSQYGE+ + +P K G F
Sbjct: 18 APGQGSWHDQYKDSAYIFIGGLNYELTEGDVITVFSQYGEVVDIDMPREKSTGKRRGFAF 77
Query: 96 VQFANSLGQIMAINGV-GHTMEGKFMMV 122
+ + + ++A++ + G + G+ + V
Sbjct: 78 LMYEDQRSTVLAVDNLNGAELAGRTLRV 105
>gi|118344182|ref|NP_001071914.1| zinc finger protein [Ciona intestinalis]
gi|92081514|dbj|BAE93304.1| zinc finger protein [Ciona intestinalis]
Length = 413
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN-SLGQIMAING 110
D + TT+++GGL V +EDLR F YGEI S+ + + FVQF S + A
Sbjct: 231 DQTITTLYIGGLGEAVNEEDLRDQFYHYGEIRSIHMATNQNYAFVQFTKRSDAETAAKRT 290
Query: 111 VGHTM-EGKFMMV 122
G M +GK ++V
Sbjct: 291 AGRLMIKGKRIVV 303
>gi|302815924|ref|XP_002989642.1| hypothetical protein SELMODRAFT_428163 [Selaginella moellendorffii]
gi|300142613|gb|EFJ09312.1| hypothetical protein SELMODRAFT_428163 [Selaginella moellendorffii]
Length = 473
Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF 98
D++ T++VGGLD VT EDL+ F YGEI S+++ + C F+ +
Sbjct: 146 DATVRTLYVGGLDERVTTEDLKDNFYSYGEIESLRLVPQRACAFITY 192
>gi|395528085|ref|XP_003766162.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein
[Sarcophilus harrisii]
Length = 1186
Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 398 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 455
Query: 82 IASVKI---------PVGKGCGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
+ASVKI + CGFV F N A+ + M F M +G
Sbjct: 456 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLG 507
>gi|356547954|ref|XP_003542369.1| PREDICTED: nucleolysin TIAR-like [Glycine max]
Length = 410
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 10/118 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYAS--NGAPGQGPQSEGDSS---- 54
+ ++ G + SR +R AT S+ ++Q S NG+ +G ++ D +
Sbjct: 189 INDLTGKWLGSRQIRCNWATKGASASDEKQSSDSKIVVELINGSSEEGQETTNDDTPEKN 248
Query: 55 --NTTIFVGGLDPNVTDEDLRQPFSQY--GEIASVKIPVGKGCGFVQFANSLGQIMAI 108
TT++VG L P VT DL Q F G I V++ KG GFV+++ +AI
Sbjct: 249 PQYTTVYVGNLAPEVTSVDLHQHFHSLNAGIIEDVRVQRDKGFGFVRYSTHAEAALAI 306
Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 35/79 (44%), Gaps = 10/79 (12%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANS 101
Q E S + IFVG L P VTD L FS Y + ++ +G GFV F N
Sbjct: 123 QREDTSGHFNIFVGDLSPEVTDATLYACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQ 182
Query: 102 LGQIMAINGVGHTMEGKFM 120
AIN + GK++
Sbjct: 183 QDAQSAIND----LTGKWL 197
>gi|256086132|ref|XP_002579259.1| nucleolysin tia-1 [Schistosoma mansoni]
gi|353232225|emb|CCD79580.1| putative nucleolysin tia-1 [Schistosoma mansoni]
Length = 547
Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVG 112
S+NTTI+VGG+ +T++ L+ F Q+GEI ++I KG F++F + + AI
Sbjct: 135 STNTTIYVGGITNELTEKLLQDSFKQFGEIKEIRIFKDKGFSFIRFDSHVAATQAIV--- 191
Query: 113 HTMEGKFM 120
TM GK +
Sbjct: 192 -TMHGKIV 198
Score = 36.2 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 24/48 (50%), Gaps = 6/48 (12%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFA 99
IFVG L P V DE L FS +G I KI KG GFV +A
Sbjct: 35 IFVGDLAPEVQDETLLAAFSNFGTITECKIIKDMHTQKPKGYGFVAYA 82
>gi|307718869|ref|YP_003874401.1| hypothetical protein STHERM_c11870 [Spirochaeta thermophila DSM
6192]
gi|306532594|gb|ADN02128.1| hypothetical protein STHERM_c11870 [Spirochaeta thermophila DSM
6192]
Length = 100
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 7/72 (9%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANSLGQIMAINGV 111
I+VG L+ T++ LRQ F QYGE+ SVKI KG GFV+ ++ AI+ +
Sbjct: 5 IYVGNLNYQTTEDTLRQLFEQYGEVESVKIITDRDSGFSKGFGFVEMSSEEAGEAAISAL 64
Query: 112 G-HTMEGKFMMV 122
H +EG+ + V
Sbjct: 65 NQHELEGRQLRV 76
>gi|344250874|gb|EGW06978.1| Pre-mRNA-splicing factor RBM22 [Cricetulus griseus]
Length = 241
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA
Sbjct: 93 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFA 140
>gi|126330354|ref|XP_001380561.1| PREDICTED: splicing factor, proline- and glutamine-rich-like
[Monodelphis domestica]
Length = 700
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 28 QQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI 87
+++ S G+ +N + + P + + +FVG L ++TDED ++ F++YGE V I
Sbjct: 263 EEKISDSEGFKANLSLLRRPGEKTYTQRCRLFVGNLPADITDEDFKRLFAKYGEPGEVFI 322
Query: 88 PVGKGCGFVQF-ANSLGQIMAINGVGHTMEGKFMMV 122
GKG GF++ + +L +I M G+ + V
Sbjct: 323 NKGKGFGFIKLESRALAEIAKAELDDTPMRGRQLRV 358
>gi|449302891|gb|EMC98899.1| hypothetical protein BAUCODRAFT_383641 [Baudoinia compniacensis
UAMH 10762]
Length = 658
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 33/65 (50%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEG 117
+++G LD + +++ LRQ F +YGEI V K C FV F N I AI V E
Sbjct: 527 VYIGNLDESWSEDRLRQDFQEYGEIELVNTLREKSCAFVNFTNIANAIKAIEAVRGKDEY 586
Query: 118 KFMMV 122
K V
Sbjct: 587 KRFKV 591
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMA 107
Q G S N +++G L VT+++LR+ S++G + ++KI K GFV F + I A
Sbjct: 294 QQSGASRN--VYLGNLPEEVTEDELREDLSKFGPLDTIKIVREKAIGFVHFLSIGNAIKA 351
Query: 108 I 108
+
Sbjct: 352 V 352
>gi|390361169|ref|XP_003729862.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor RBM22-like
[Strongylocentrotus purpuratus]
Length = 483
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLG 103
++ D TT++VGGL VT+EDL+ F Q+GE+ S+ + + C FV F N G
Sbjct: 224 EAPEDRMITTLYVGGLGDKVTEEDLKGHFYQFGELRSINVVPKQQCAFVTFTNRQG 279
>gi|156357140|ref|XP_001624081.1| predicted protein [Nematostella vectensis]
gi|156210835|gb|EDO31981.1| predicted protein [Nematostella vectensis]
Length = 413
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 33/49 (67%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
D S TT++VGGL+ VT++DLR F Q+GE+ S+ + + C FV F +
Sbjct: 229 DRSITTLYVGGLEGKVTEQDLRDHFYQFGELRSISMVPRQNCAFVCFTS 277
>gi|449489106|ref|XP_002195780.2| PREDICTED: splicing factor, proline- and glutamine-rich
[Taeniopygia guttata]
Length = 648
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 31 YSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG 90
+ + G+ +N + + P + + +FVG L ++TDED ++ F++YGE V I G
Sbjct: 213 WRRRQGFKANLSLLRRPGEKTYTQRCRLFVGNLPADITDEDFKRLFAKYGEPGEVFINKG 272
Query: 91 KGCGFVQF-ANSLGQIMAINGVGHTMEGKFMMV 122
KG GF++ + +L +I M G+ + V
Sbjct: 273 KGFGFIKLESRALAEIAKAELDDTPMRGRQLRV 305
>gi|86606333|ref|YP_475096.1| RNA-binding protein [Synechococcus sp. JA-3-3Ab]
gi|86554875|gb|ABC99833.1| putative RNA-binding protein [Synechococcus sp. JA-3-3Ab]
Length = 96
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANSLGQIMAING 110
TIFVG L ++EDLR FS+YG + +K+PV +G FV+ N + AI+
Sbjct: 2 TIFVGNLSFKASEEDLRLVFSEYGTVKQIKLPVDRETGRKRGFAFVELENEADEQKAIDE 61
Query: 111 V-GHTMEGKFMMV 122
+ G T G+ + V
Sbjct: 62 LDGATWMGRDLRV 74
>gi|410971262|ref|XP_003992089.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein [Felis
catus]
Length = 1015
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 12/113 (10%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANSLGQIMAINGV-GHTMEGKFMMVMG 124
+ASVKI + CGFV F N A+ + G M F M +G
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKKMIMSFEMKLG 352
>gi|255641747|gb|ACU21144.1| unknown [Glycine max]
Length = 397
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 10/118 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYAS--NGAPGQGPQSEGDSS---- 54
+ ++ G + SR +R AT S+ ++Q S NG+ +G ++ D +
Sbjct: 189 INDLTGKWLGSRQIRCNWATKGASASDEKQSSDSKIVVELINGSSEEGQETTNDDTPEKN 248
Query: 55 --NTTIFVGGLDPNVTDEDLRQPFSQY--GEIASVKIPVGKGCGFVQFANSLGQIMAI 108
TT++VG L P VT DL Q F G I V++ KG GFV+++ +AI
Sbjct: 249 PQYTTVYVGNLAPEVTSVDLHQHFHSLNAGIIEDVRVQRDKGFGFVRYSTHAEAALAI 306
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 35/79 (44%), Gaps = 10/79 (12%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANS 101
Q E S + IFVG L P VTD L FS Y + ++ +G GFV F N
Sbjct: 123 QREDTSGHFNIFVGDLSPEVTDATLYACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQ 182
Query: 102 LGQIMAINGVGHTMEGKFM 120
AIN + GK++
Sbjct: 183 QDAQSAIN----DLTGKWL 197
>gi|449273105|gb|EMC82713.1| Splicing factor, proline- and glutamine-rich, partial [Columba
livia]
Length = 425
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 36 GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGF 95
G+ +N + + P + + +FVG L ++TDED ++ F++YGE V I GKG GF
Sbjct: 1 GFKANLSLLRRPGEKTYTQRCRLFVGNLPADITDEDFKRLFAKYGEPGEVFINKGKGFGF 60
Query: 96 VQF-ANSLGQIMAINGVGHTMEGKFMMV 122
++ + +L +I M G+ + V
Sbjct: 61 IKLESRALAEIAKAELDDTPMRGRQLRV 88
>gi|402910488|ref|XP_003917908.1| PREDICTED: non-POU domain-containing octamer-binding protein-like
isoform 3 [Papio anubis]
Length = 463
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 18 AATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS 77
A TPR+ + + G + + P + + + +FVG L P++T+E++R+ F
Sbjct: 33 AVTPRRDQSVEDE-----GLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFE 87
Query: 78 QYGEIASVKIPVGKGCGFVQF-ANSLGQIMAINGVGHTMEGKFMMV 122
+YG+ V I KG GF++ +L +I + + GK + V
Sbjct: 88 KYGKAGEVFIHKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRV 133
>gi|12083748|dbj|BAB20902.1| HrTLC2 [Halocynthia roretzi]
Length = 427
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 6/68 (8%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANSLG 103
+GD S T +++ GL PN +DEDL QYG+I S K + KG GFV F
Sbjct: 84 QGDLSKTNLYIRGLTPNTSDEDLVNLCKQYGKIVSTKAIIDPQTSLCKGYGFVDFDRYES 143
Query: 104 QIMAINGV 111
++A+ +
Sbjct: 144 AVLAVTSL 151
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 7/56 (12%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQF 98
Q E D +N +++ GL PN + DL Q YG++ S +I V KG GF +
Sbjct: 163 QQEQDPTN--LYLSGLPPNFNEHDLEQMLLPYGQVISTRILRDSNGVSKGVGFARM 216
>gi|398341593|ref|ZP_10526296.1| RNA recognition motif-containing protein [Leptospira inadai serovar
Lyme str. 10]
gi|398346075|ref|ZP_10530778.1| RNA recognition motif-containing protein [Leptospira broomii str.
5399]
Length = 86
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANS 101
N +FVG L+ +V ++ + FS YGE+A VKI GKG GFV+ AN
Sbjct: 3 NRKLFVGNLNYSVGHSEINELFSNYGEVAFVKIIEGKGFGFVEMANE 49
>gi|253683353|dbj|BAH84828.1| TIA-1-related RNA binding protein [Spodoptera frugiperda]
Length = 283
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 54/115 (46%), Gaps = 9/115 (7%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPG---QGPQSEGDSSNTTIFV 60
MNG + SR +R +T + S ++G +S A ++ +NTT++
Sbjct: 157 MNGQWLGSRSIRTNWSTRKPPSK-----PNEGAPSSKRAKQPTFDEVYNQSSPTNTTVYC 211
Query: 61 GGLDPNVTDEDLRQ-PFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHT 114
GG NV EDL Q FSQ+G+I V++ KG F++F AI +T
Sbjct: 212 GGFTSNVITEDLMQNTFSQFGQIQDVRVFRDKGYAFIRFTTKEAAAHAIEATHNT 266
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 10/81 (12%)
Query: 40 NGAPGQGPQSEGDSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKG 92
N A G Q + D+SN IFVG L P + LR F+ +GEI++ +I KG
Sbjct: 79 NWATSPGNQPKTDTSNHHHIFVGDLSPEIETHILRDAFAPFGEISNCRIVRDPQTLKSKG 138
Query: 93 CGFVQF---ANSLGQIMAING 110
FV F A++ I A+NG
Sbjct: 139 YAFVSFVKKADAEAAIQAMNG 159
>gi|392567132|gb|EIW60307.1| hypothetical protein TRAVEDRAFT_70736 [Trametes versicolor
FP-101664 SS1]
Length = 1299
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 55/126 (43%), Gaps = 16/126 (12%)
Query: 19 ATPRKSSGYQQQYSSQGGYASNG-----APGQG------PQSEGDS-----SNTTIFVGG 62
ATPR + +Q AS AP QG P+SE S ++++G
Sbjct: 398 ATPRNGLAASVHFPNQEPPASRASAYLAAPSQGQNRAVSPKSENPSGQMQTPTRSLWIGN 457
Query: 63 LDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGKFMMV 122
LD + + E L F+ YG I S+++ K CGFV F + I A + V + + G M
Sbjct: 458 LDSSFSSEQLIHVFAPYGAIESLRLLPEKECGFVNFVDQADAIRAKDDVLNRLGGDIGMP 517
Query: 123 MGMLFR 128
G R
Sbjct: 518 NGQTVR 523
>gi|410909191|ref|XP_003968074.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
[Takifugu rubripes]
Length = 974
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD S T +++G ++P + +E L Q F +YG +ASVKI + CGFV
Sbjct: 201 GSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRYGPLASVKIMWPRTDEERARERNCGFV 260
Query: 97 QFANSLGQIMAINGVGHTMEGKFMMVMG 124
F N A+ + M F M +G
Sbjct: 261 AFMNRRDAERALKHLNGKMIMNFEMKLG 288
>gi|157108578|ref|XP_001650293.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108879258|gb|EAT43483.1| AAEL005049-PA [Aedes aegypti]
Length = 287
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 17/88 (19%)
Query: 39 SNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKG 92
SNG PG+ + +FVGGL T++DLR F QYGEI SV + +G
Sbjct: 17 SNGNPGR-------DDDRKLFVGGLSKETTEQDLRNHFGQYGEIESVNVKTDPQTGRSRG 69
Query: 93 CGFVQF--ANSLGQIMAINGVGHTMEGK 118
F+ F S+ +++A HT+ GK
Sbjct: 70 FAFIIFNSPESIDKVVAFE--DHTVNGK 95
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK 91
IFVGGL P +DE+++ F Q+G + +++P K
Sbjct: 109 IFVGGLSPETSDEEVKTFFEQFGNVVEMEMPFDK 142
>gi|115477976|ref|NP_001062583.1| Os09g0115400 [Oryza sativa Japonica Group]
gi|46389987|dbj|BAD16229.1| putative poly(A)-binding protein [Oryza sativa Japonica Group]
gi|113630816|dbj|BAF24497.1| Os09g0115400 [Oryza sativa Japonica Group]
gi|125562753|gb|EAZ08133.1| hypothetical protein OsI_30396 [Oryza sativa Indica Group]
gi|125604734|gb|EAZ43770.1| hypothetical protein OsJ_28392 [Oryza sativa Japonica Group]
gi|169244485|gb|ACA50516.1| poly(A)-binding protein [Oryza sativa Japonica Group]
gi|215695451|dbj|BAG90618.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 662
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 8/100 (8%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFANSLGQIMAIN 109
NT +++ LD +V D+ LR+ F++YG I S K+ V +G GFV F ++ A+
Sbjct: 321 NTNLYLKNLDDSVDDDKLRELFAEYGTITSCKVMRDSNGVSRGSGFVAFKSAEDASRALA 380
Query: 110 GVGHTMEGKFMMVMGMLFRHQMTQA---CTLQQLRPMGLT 146
+ M G + + + R + +A QLRP+ L
Sbjct: 381 EMNSKMVGSKPLYVALAQRKEDRKARLQAQFSQLRPVPLA 420
>gi|357629028|gb|EHJ78065.1| putative RNA binding motif protein 22 [Danaus plexippus]
Length = 405
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF 98
D + TT+++G L N+T+E+LR F QYGEI S+ + C FVQ+
Sbjct: 228 DRTVTTLYIGNLPENITEEELRGHFYQYGEIRSLTLVPRAQCAFVQY 274
>gi|344244393|gb|EGW00497.1| U2-associated protein SR140 [Cricetulus griseus]
Length = 649
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 52/119 (43%), Gaps = 15/119 (12%)
Query: 15 RIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQ 74
R+ P +S Q+ S YA G GD S T +++G ++P + +E L Q
Sbjct: 139 RLSRFEPPQSDSDGQRRSILDDYAP------GSHDVGDPSTTNLYLGNINPQMNEEMLCQ 192
Query: 75 PFSQYGEIASVKI---------PVGKGCGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
F ++G +ASVKI + CGFV F N A+ + M F M +G
Sbjct: 193 EFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLG 251
>gi|148807187|gb|ABR13303.1| putative oligouridylate-binding protein [Prunus dulcis]
Length = 233
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 52/109 (47%), Gaps = 10/109 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYA--SNGAPGQG---PQSEGDSSN 55
+ ++NG + SR +R AT +S +Q S +NG G P + +N
Sbjct: 125 INDLNGKWLGSRQIRCNWATKGATSNDDKQSSDSKSVVELTNGTSEDGQEKPNEDAPENN 184
Query: 56 ---TTIFVGGLDPNVTDEDLRQPFSQYGE--IASVKIPVGKGCGFVQFA 99
TT++VG L P VT DL + F G I V++ KG GFV+F+
Sbjct: 185 PQYTTVYVGNLAPEVTSVDLHRHFHSLGAGTIEDVRVQRDKGFGFVRFS 233
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 35/79 (44%), Gaps = 10/79 (12%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANS 101
Q E S + IFVG L P VTD L FS Y + ++ +G GFV F +
Sbjct: 59 QREDTSGHFNIFVGDLSPEVTDATLFACFSVYSSCSDARVMWDQKTGRSRGFGFVSFRSQ 118
Query: 102 LGQIMAINGVGHTMEGKFM 120
AIN + GK++
Sbjct: 119 QDAQSAIN----DLNGKWL 133
>gi|341900768|gb|EGT56703.1| CBN-SUP-26 protein [Caenorhabditis brenneri]
Length = 386
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 33 SQGGYASNGAPGQGPQSEGDS--SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG 90
S GY AP G Q + S+T +++ GL PN D+ LR+ S+YG IAS K +
Sbjct: 60 SNNGYGRYTAPRDGQQHHDSTPLSSTNLYIRGLAPNTNDDTLREMCSKYGNIASTKAIMD 119
Query: 91 ------KGCGFVQFANSLGQIMAINGV 111
KG GFV F + A++G+
Sbjct: 120 KSTNNCKGYGFVDFESPQAAAAAVDGL 146
>gi|149018881|gb|EDL77522.1| rCG25679, isoform CRA_c [Rattus norvegicus]
Length = 784
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 11/92 (11%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKG 92
APG GD S T +++G ++P + +E L Q F ++G +ASVKI +
Sbjct: 17 APGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERN 74
Query: 93 CGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
CGFV F N A+ + M F M +G
Sbjct: 75 CGFVAFMNRRDAERALKNLNGKMIMSFEMKLG 106
>gi|255636731|gb|ACU18701.1| unknown [Glycine max]
Length = 195
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-----PVGKGCGFVQFANSLGQIMA 107
+++I+VGGL + T+E +R F+ YG I VKI GK FV F N I A
Sbjct: 4 DDDSSIYVGGLPYDATEETIRTVFNLYGAILDVKIINDPRTRGKCYCFVTFTNPRSAIDA 63
Query: 108 INGV-GHTMEGKFMMVMGMLFR 128
IN + G T++G+ + V G+ R
Sbjct: 64 INDMNGRTIDGRVVKVNGVRTR 85
>gi|226528044|dbj|BAH56564.1| TIA-1-related RNA binding protein [Spodoptera litura]
Length = 388
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 13/117 (11%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQ-----SEGDSSNTTI 58
MNG + SR +R +T + S ++G +S A + P ++ +NTT+
Sbjct: 157 MNGQWLGSRSIRTNWSTRKPPSK-----PNEGAPSSKRA--KQPTFDEVYNQSSPTNTTV 209
Query: 59 FVGGLDPNVTDEDLRQ-PFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHT 114
+ GG NV EDL Q FSQ+G+I V++ KG F++F AI +T
Sbjct: 210 YCGGFTSNVITEDLMQNTFSQFGQIQDVRVFRDKGYAFIRFTTKEAAAHAIEATHNT 266
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 10/81 (12%)
Query: 40 NGAPGQGPQSEGDSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKG 92
N A G Q + D+SN IFVG L P + LR F+ +GEI++ +I KG
Sbjct: 79 NWATSPGNQPKTDTSNHHHIFVGDLSPEIETHILRDAFAPFGEISNCRIVRDPQTLKSKG 138
Query: 93 CGFVQF---ANSLGQIMAING 110
FV F A++ I A+NG
Sbjct: 139 YAFVSFVKKADAEAAIQAMNG 159
>gi|348536946|ref|XP_003455956.1| PREDICTED: protein boule-like [Oreochromis niloticus]
Length = 334
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFANSLGQIMAINGV- 111
IFVG LD V + DLR FSQ+G + VKI V +G GFV F + +N
Sbjct: 44 IFVGALDYRVNERDLRHIFSQHGTVKEVKIVLDHSGVSRGYGFVTFETQEDALKILNNTN 103
Query: 112 GHTMEGKFMMVMGMLFRHQ 130
G T + K + V +HQ
Sbjct: 104 GVTFKDKKLSVGPAFRKHQ 122
>gi|213983047|ref|NP_001135684.1| U2 snRNP-associated SURP domain containing [Xenopus (Silurana)
tropicalis]
gi|197245900|gb|AAI68618.1| Unknown (protein for MGC:186104) [Xenopus (Silurana) tropicalis]
Length = 970
Score = 48.9 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD S T +++G ++P + +E L Q F ++G +ASVKI + CGFV
Sbjct: 206 GSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFV 265
Query: 97 QFANSLGQIMAINGVGHTMEGKFMMVMG 124
F N A+ + M F M +G
Sbjct: 266 AFMNRRDAERALKNLNGKMVMNFEMKLG 293
>gi|449547615|gb|EMD38583.1| hypothetical protein CERSUDRAFT_113767 [Ceriporiopsis subvermispora
B]
Length = 1280
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Query: 47 PQSEGDSS-----NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANS 101
P+SE S+ ++++G LD VT E L F+ YG I S+++ K CGFV F +
Sbjct: 429 PKSENSSTQMQTPTRSLWIGNLDSTVTSEQLIHVFAPYGAIESLRLLPEKECGFVNFVDQ 488
Query: 102 LGQIMAINGVGHTMEGKFMMVMGMLFR 128
I A V + + G M G R
Sbjct: 489 ADAIRAKEDVLNRLGGDIGMPNGQTVR 515
>gi|194383074|dbj|BAG59093.1| unnamed protein product [Homo sapiens]
Length = 412
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 11/113 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANSLGQIMAINGVGHTMEGKFMMVMGM 125
+ASVKI + CGFV F N A+ + M F M +G
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGW 352
>gi|149042187|gb|EDL95894.1| rCG36231, isoform CRA_c [Rattus norvegicus]
Length = 444
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 29 QQYSSQG-GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI 87
QQ SSQ G + + P + + + +FVG L P++T+E++R+ F +YG+ V I
Sbjct: 51 QQASSQNEGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFI 110
Query: 88 PVGKGCGFVQF-ANSLGQIMAINGVGHTMEGKFMMV 122
KG GF++ +L +I + + GK + V
Sbjct: 111 HKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRV 146
>gi|302760911|ref|XP_002963878.1| hypothetical protein SELMODRAFT_4662 [Selaginella moellendorffii]
gi|302813190|ref|XP_002988281.1| hypothetical protein SELMODRAFT_4658 [Selaginella moellendorffii]
gi|300144013|gb|EFJ10700.1| hypothetical protein SELMODRAFT_4658 [Selaginella moellendorffii]
gi|300169146|gb|EFJ35749.1| hypothetical protein SELMODRAFT_4662 [Selaginella moellendorffii]
Length = 188
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 39 SNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KG 92
+NG+ GP S IFVGGL NVT++D R+ F Q+G I V + +G
Sbjct: 87 ANGSAVAGPGGHASSKTKKIFVGGLGSNVTEDDFRKYFEQFGTITDVVVMYDHATQRPRG 146
Query: 93 CGFVQFANSLGQIMAINGVGHTMEGKFMMV 122
GF+ F ++ H ++ K + V
Sbjct: 147 FGFITFDTEEAVDNVLHKTFHELKEKMVEV 176
>gi|449446638|ref|XP_004141078.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
Length = 420
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 58/124 (46%), Gaps = 22/124 (17%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYS------------SQGG--YASNGAPGQG 46
+ ++NG + SR +R AT +SG +Q S S GG ++ AP
Sbjct: 189 INDINGKWLGSRQIRCNWATKGANSGDDKQSSDSRSVVELTSGTSDGGQEKSNEDAPENN 248
Query: 47 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE--IASVKIPVGKGCGFVQFANSLGQ 104
PQ TT++VG L P VT DL + F G I V++ KG GFV+++ +
Sbjct: 249 PQY------TTVYVGNLAPEVTSVDLHRYFHALGAGTIEDVRVQRDKGFGFVRYSTNAEA 302
Query: 105 IMAI 108
+AI
Sbjct: 303 ALAI 306
Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 35/79 (44%), Gaps = 10/79 (12%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANS 101
Q E S + IFVG L P VTD L FS Y + ++ +G GFV F N
Sbjct: 123 QREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAFRNE 182
Query: 102 LGQIMAINGVGHTMEGKFM 120
AIN + GK++
Sbjct: 183 QDAQSAINDIN----GKWL 197
>gi|1083440|pir||A54691 octamer-binding protein NonO - mouse
gi|409981|gb|AAB27887.1| NonO [Mus sp.]
Length = 473
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 29 QQYSSQG-GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI 87
QQ SSQ G + + P + + + +FVG L P++T+E++R+ F +YG+ V I
Sbjct: 48 QQASSQNEGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFI 107
Query: 88 PVGKGCGFVQF-ANSLGQIMAINGVGHTMEGKFMMV 122
KG GF++ +L +I+ + + GK + V
Sbjct: 108 HKDKGFGFIRLETRTLAEIVKVELDNMPLRGKQLRV 143
>gi|449267139|gb|EMC78105.1| Pre-mRNA-splicing factor RBM22 [Columba livia]
Length = 420
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 32/48 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D + TT++VGGL +++ DLR F Q+GEI ++ + + C F+QFA
Sbjct: 228 DKTITTLYVGGLGDTISESDLRNHFYQFGEIRTITVVQRQQCAFIQFA 275
>gi|45946398|gb|AAH68265.1| RIKEN cDNA 2610101N10 gene [Mus musculus]
Length = 985
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 198 RRSMDVPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 255
Query: 82 IASVKI---------PVGKGCGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
+ASVKI + CGFV F + A+ + M F M +G
Sbjct: 256 LASVKIMWPRTDEERARERNCGFVAFMSRRDAERALKNLNGKMIMSFEMKLG 307
>gi|290561328|gb|ADD38066.1| Pre-mRNA-splicing factor RBM22 [Lepeophtheirus salmonis]
Length = 362
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
++ D TT++VGGLD + ++D+ F QYGEI ++ + +GC FVQF+
Sbjct: 212 ETPEDPLITTLYVGGLDDVLDEKDISSHFYQYGEIRNITLVPKQGCAFVQFS 263
>gi|358340385|dbj|GAA34086.2| pre-mRNA-splicing factor RBM22/SLT11 [Clonorchis sinensis]
Length = 534
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF 98
D + TT+++G + VT+ DLR F Q+GEI SV + + C F+QF
Sbjct: 244 DRTITTLYIGSIPDEVTERDLRNHFYQFGEIRSVNLHPRQHCAFIQF 290
>gi|384247365|gb|EIE20852.1| hypothetical protein COCSUDRAFT_4708, partial [Coccomyxa
subellipsoidea C-169]
Length = 264
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAING 110
D +NT ++VG L V +EDLR F YGEI +K G GFV + + + AI G
Sbjct: 188 ADPANTNVYVGNLPTEVMEEDLRAAFGAYGEITGLKPCHKGGYGFVTYRDHSAAVQAIVG 247
Query: 111 V-GHTMEGKFM 120
+ G ++GK +
Sbjct: 248 MNGKELKGKMV 258
>gi|194881758|ref|XP_001974988.1| GG22076 [Drosophila erecta]
gi|190658175|gb|EDV55388.1| GG22076 [Drosophila erecta]
Length = 960
Score = 48.5 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 13/91 (14%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVG 90
N + G GD + T +++G L+P ++++ L + F +YG +AS+KI G
Sbjct: 199 NSSKESGSFDTGDPNTTNLYLGNLNPKISEQQLMEIFGRYGPLASIKIMWPRSEEEKQRG 258
Query: 91 KGCGFVQFANSLGQIMAINGVGHTMEGKFMM 121
+ CGFV + + A+ T+ G+++M
Sbjct: 259 RNCGFVAYMSRKDAERAL----RTLNGRYIM 285
>gi|409046171|gb|EKM55651.1| hypothetical protein PHACADRAFT_256428 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1287
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTME 116
++++G LD +VT E L F+ YG I S+++ K CGFV F + I A + V + +
Sbjct: 446 SLWIGNLDSSVTSEQLIHVFAPYGAIESLRLLPEKECGFVNFVDQADAIRAKDDVLNRLG 505
Query: 117 GKFMMVMGMLFR 128
G M G R
Sbjct: 506 GDIGMPNGQTVR 517
>gi|414588971|tpg|DAA39542.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 648
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 8/100 (8%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFANSLGQIMAIN 109
NT +++ L+ N+ DE LR+ F++YG I S K+ V +G GFV F ++ A+
Sbjct: 316 NTNLYLKNLEENIDDEKLRELFAEYGNITSCKVMRDSNGVSRGSGFVAFKSAEDANRALT 375
Query: 110 GVGHTMEGKFMMVMGMLFRHQMTQA---CTLQQLRPMGLT 146
+ M G + + + R + +A Q+RP+ +
Sbjct: 376 EMNGKMVGSKPLYVALAQRKEDRKAKLQAQFSQMRPVAMA 415
>gi|307193268|gb|EFN76159.1| RNA-binding protein squid [Harpegnathos saltator]
Length = 334
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 12/85 (14%)
Query: 35 GGYASNGAPGQGPQSEG---DSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG 90
G A NG Q +S DS N +FVGGL TD++LR+ FS YG+I S+ +
Sbjct: 49 GDAADNGQESQEDRSASGNQDSLNDRKLFVGGLSWETTDKELREHFSSYGDIESINVKTD 108
Query: 91 ------KGCGFVQF--ANSLGQIMA 107
+G F+ F A SL +IMA
Sbjct: 109 PNTGRSRGFAFIVFAKAESLDKIMA 133
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK 91
IFVGGL ++D+D++ FSQ+G I V++P K
Sbjct: 156 IFVGGLSTELSDDDIKNFFSQFGTIVEVEMPFDK 189
>gi|2244786|emb|CAB10209.1| ribonucleoprotein like protein [Arabidopsis thaliana]
gi|7268135|emb|CAB78472.1| ribonucleoprotein like protein [Arabidopsis thaliana]
Length = 406
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
Query: 49 SEGDSSNTT--IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFAN 100
S GD+ N T IFVGGL P +TDE+ RQ F YG + V I +G GFV F +
Sbjct: 96 SGGDAYNKTKKIFVGGLPPTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDS 155
Query: 101 SLGQIMAINGVGHTMEGKFMMVMGML 126
++ H + GK + V L
Sbjct: 156 EDAVDSVLHKTFHDLSGKQVEVKRAL 181
>gi|355707593|gb|AES03003.1| non-POU domain containing, octamer-binding protein [Mustela
putorius furo]
Length = 375
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 29 QQYSSQG-GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI 87
QQ SSQ G + + P + + + +FVG L P++T+E++R+ F +YG+ V I
Sbjct: 45 QQASSQNEGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFI 104
Query: 88 PVGKGCGFVQF-ANSLGQIMAINGVGHTMEGKFMMV 122
KG GF++ +L +I + + GK + V
Sbjct: 105 HKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRV 140
>gi|327267754|ref|XP_003218664.1| PREDICTED: nucleolysin TIAR-like [Anolis carolinensis]
Length = 342
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 10/112 (8%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 42 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 101
Query: 94 GFVQFANSLGQIMAINGVGHTMEGKFMMVMGMLFRH----QMTQACTLQQLR 141
GFV F N L AI +G G + R + TQ T +QLR
Sbjct: 102 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKTTQESTTKQLR 153
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV-GH 113
N T++ GG+ +TD+ +RQ FS +G+I + GKG FV+F+ AI V G
Sbjct: 165 NCTVYCGGIASGLTDQLMRQTFSPFGQILETRAFPGKGYSFVRFSTHESAAHAIVSVNGT 224
Query: 114 TMEG 117
T+EG
Sbjct: 225 TIEG 228
>gi|268552599|ref|XP_002634282.1| Hypothetical protein CBG17615 [Caenorhabditis briggsae]
Length = 406
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 6/62 (9%)
Query: 41 GAPGQGPQSEGDSSNTTIFVGGLDPN----VTDEDLRQPFSQYGEIASVKIPVGKGCGFV 96
AP P + D++ TT+++G L PN VT++DL F QYG+I +++ KGC F+
Sbjct: 222 AAPTLSPPA--DTTITTLYIGNLGPNGPQQVTEKDLNDFFYQYGDIRCLRVLTEKGCAFI 279
Query: 97 QF 98
+F
Sbjct: 280 EF 281
>gi|119599362|gb|EAW78956.1| hCG27481, isoform CRA_b [Homo sapiens]
Length = 998
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 11/92 (11%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKG 92
APG GD S T +++G ++P + +E L Q F ++G +ASVKI +
Sbjct: 231 APGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERN 288
Query: 93 CGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
CGFV F N A+ + M F M +G
Sbjct: 289 CGFVAFMNRRDAERALKNLNGKMIMSFEMKLG 320
>gi|414588970|tpg|DAA39541.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 654
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 8/100 (8%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFANSLGQIMAIN 109
NT +++ L+ N+ DE LR+ F++YG I S K+ V +G GFV F ++ A+
Sbjct: 316 NTNLYLKNLEENIDDEKLRELFAEYGNITSCKVMRDSNGVSRGSGFVAFKSAEDANRALT 375
Query: 110 GVGHTMEGKFMMVMGMLFRHQMTQA---CTLQQLRPMGLT 146
+ M G + + + R + +A Q+RP+ +
Sbjct: 376 EMNGKMVGSKPLYVALAQRKEDRKAKLQAQFSQMRPVAMA 415
>gi|150951177|ref|XP_001387451.2| RNA-binding protein [Scheffersomyces stipitis CBS 6054]
gi|149388382|gb|EAZ63428.2| RNA-binding protein, partial [Scheffersomyces stipitis CBS 6054]
Length = 165
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 10/77 (12%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANSLG 103
E D + +FVG L P+ D+ L FS+Y ++ VK+PV KG GFV FA++
Sbjct: 73 EWDPKHFRLFVGNLGPDANDQLLHSAFSKYASMSKVKVPVDTKSGKNKGFGFVAFADAND 132
Query: 104 QIMAINGVGHTMEGKFM 120
A M GK++
Sbjct: 133 YFQAFKD----MNGKYI 145
>gi|149524110|ref|XP_001513533.1| PREDICTED: splicing factor, proline- and glutamine-rich-like,
partial [Ornithorhynchus anatinus]
Length = 430
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 36 GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGF 95
G+ +N + + P + + +FVG L ++TDED ++ F++YGE V I GKG GF
Sbjct: 1 GFKANLSLLRRPGEKTYTQRCRLFVGNLPADITDEDFKRLFAKYGEPGEVFINKGKGFGF 60
Query: 96 VQF-ANSLGQIMAINGVGHTMEGKFMMV 122
++ + +L +I M G+ + V
Sbjct: 61 IKLESRALAEIAKAELDDTPMRGRQLRV 88
>gi|148688989|gb|EDL20936.1| RIKEN cDNA 2610101N10 [Mus musculus]
Length = 1028
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD S T +++G ++P + +E L Q F ++G +ASVKI + CGFV
Sbjct: 263 GSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFV 322
Query: 97 QFANSLGQIMAINGVGHTMEGKFMMVMG 124
F N A+ + M F M +G
Sbjct: 323 AFMNRRDAERALKNLNGKMIMSFEMKLG 350
>gi|384484371|gb|EIE76551.1| hypothetical protein RO3G_01255 [Rhizopus delemar RA 99-880]
Length = 302
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
D S T++F+ G++ +++ EDL + FS +G+I S+ + K C FV F + +A +
Sbjct: 209 DKSITSLFITGVEEDISQEDLNEYFSVFGDIKSIIVAHKKKCAFVNFVTRMSTELAAAKI 268
Query: 112 ---GHTMEGKFMMVMG 124
G T++ ++V+
Sbjct: 269 AEDGLTLKEHSLVVVW 284
>gi|340506470|gb|EGR32595.1| hypothetical protein IMG5_076250 [Ichthyophthirius multifiliis]
Length = 242
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFAN-SL 102
E + N TI+VG L + +E+L+ FSQYGEI ++K+ KG GF+Q+ + +
Sbjct: 11 ENTAQNCTIYVGHLPHGLLEEELKTYFSQYGEIQNIKVARSKKTARSKGYGFIQYLHPEV 70
Query: 103 GQIMAINGVGHTMEGKFMMV 122
I + GH + GK + V
Sbjct: 71 AAIASKTVNGHMVSGKVLQV 90
>gi|218197672|gb|EEC80099.1| hypothetical protein OsI_21840 [Oryza sativa Indica Group]
Length = 617
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 41 GAPGQGPQ--SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF 98
G G+ P D S T+++GGL+ +T++DLR F +GEI S+++ + + C FV +
Sbjct: 343 GKAGEMPSLTPPDDESIRTLYIGGLNNRITEQDLRDQFYAHGEIESIRMVLQRACAFVTY 402
Query: 99 ANSLG 103
G
Sbjct: 403 TTREG 407
>gi|84998348|ref|XP_953895.1| RNA-binding (SR) protein [Theileria annulata]
gi|65304893|emb|CAI73218.1| RNA-binding (SR) protein, putative [Theileria annulata]
Length = 303
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 12/75 (16%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANS- 101
+E D + IF GGL + T EDL++ FS+YGE+ +I K G GFV FA+
Sbjct: 21 TESDYESLKIFAGGLTRSTTPEDLKEYFSKYGEVTHTEIVRDKNTGRSRGFGFVTFADRD 80
Query: 102 -----LGQIMAINGV 111
L ++ I+GV
Sbjct: 81 SVNTVLRKVHKIDGV 95
>gi|410900506|ref|XP_003963737.1| PREDICTED: nucleolysin TIAR-like isoform 2 [Takifugu rubripes]
Length = 408
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P++T ED+R F+ +G I+ ++ KG
Sbjct: 104 NWATSPSCQKKDTSNHFHVFVGDLSPDITTEDIRAAFAPFGHISDARVLKDMATGKSKGY 163
Query: 94 GFVQFANSLGQIMAINGV-GHTMEGK 118
GFV F N L AI+ + G ++G+
Sbjct: 164 GFVSFYNKLDAENAISKMAGQWLQGR 189
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV-GH 113
N T++ GG+ +T+ ++Q FS +G+I +++ KG FV+F++ AI V G
Sbjct: 227 NCTVYCGGIQSGLTEHLMQQTFSPFGQIMEIRVFPDKGYSFVRFSSHDSAAHAIVSVNGT 286
Query: 114 TMEGKFM 120
+EG +
Sbjct: 287 VIEGNLV 293
>gi|380811072|gb|AFE77411.1| U2 snRNP-associated SURP motif-containing protein [Macaca mulatta]
gi|383416995|gb|AFH31711.1| U2 snRNP-associated SURP motif-containing protein [Macaca mulatta]
gi|384946074|gb|AFI36642.1| U2 snRNP-associated SURP motif-containing protein [Macaca mulatta]
Length = 1028
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD S T +++G ++P + +E L Q F ++G +ASVKI + CGFV
Sbjct: 263 GSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFV 322
Query: 97 QFANSLGQIMAINGVGHTMEGKFMMVMG 124
F N A+ + M F M +G
Sbjct: 323 AFMNRRDAERALKNLNGKMIMSFEMKLG 350
>gi|218200015|gb|EEC82442.1| hypothetical protein OsI_26865 [Oryza sativa Indica Group]
Length = 427
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 10/128 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQG-GYASNGAPGQGPQS------EGDS 53
+ ++NG + SR +R AT S+G QQ S+ +N G + E +
Sbjct: 208 INDLNGQWLGSRQIRCNWATKGASNGEQQTSDSKNVADLTNNLTEDGKEKANEDVPENNP 267
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGE--IASVKIPVGKGCGFVQFANSLGQIMAIN-G 110
T++VG L VT + L + F G I V+I +GKG GFV++++ +AI G
Sbjct: 268 QYRTVYVGNLAHEVTQDVLHRLFHALGAGAIEEVRIQLGKGFGFVRYSSHTEAALAIQMG 327
Query: 111 VGHTMEGK 118
G + GK
Sbjct: 328 NGRILGGK 335
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANS 101
Q E + + IFVG L P VTD L FS Y + ++ +G GFV F N
Sbjct: 142 QREDTTDHFNIFVGDLSPEVTDSALFAFFSGYSSCSDARVMWDQKTGRSRGYGFVSFRNQ 201
Query: 102 LGQIMAINGV 111
AIN +
Sbjct: 202 QDAQSAINDL 211
>gi|209364570|ref|NP_001127512.1| U2 snRNP-associated SURP motif-containing protein [Pongo abelii]
gi|75070608|sp|Q5R7X2.1|SR140_PONAB RecName: Full=U2 snRNP-associated SURP motif-containing protein;
AltName: Full=140 kDa Ser/Arg-rich domain protein;
AltName: Full=U2-associated protein SR140
gi|55730839|emb|CAH92138.1| hypothetical protein [Pongo abelii]
Length = 1028
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD S T +++G ++P + +E L Q F ++G +ASVKI + CGFV
Sbjct: 263 GSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFV 322
Query: 97 QFANSLGQIMAINGVGHTMEGKFMMVMG 124
F N A+ + M F M +G
Sbjct: 323 AFMNRRDAERALKNLNGKMIMSFEMKLG 350
>gi|13623693|gb|AAH06474.1| Unknown (protein for IMAGE:2820942), partial [Homo sapiens]
Length = 1027
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD S T +++G ++P + +E L Q F ++G +ASVKI + CGFV
Sbjct: 262 GSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFV 321
Query: 97 QFANSLGQIMAINGVGHTMEGKFMMVMG 124
F N A+ + M F M +G
Sbjct: 322 AFMNRRDAERALKNLNGKMIMSFEMKLG 349
>gi|393220498|gb|EJD05984.1| hypothetical protein FOMMEDRAFT_119427 [Fomitiporia mediterranea
MF3/22]
Length = 1316
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTME 116
++++G LD +VT E L F+ YG I S+++ K CGFV F + I A + V + +
Sbjct: 454 SLWIGNLDSSVTSEQLIHVFAPYGAIESLRLLPEKECGFVNFVDQEDAIRAKDDVLNRLG 513
Query: 117 GKFMMVMGMLFR 128
G+ M G R
Sbjct: 514 GQIGMPNGAAVR 525
>gi|22328624|ref|NP_193166.2| ribonucleoprotein 1 [Arabidopsis thaliana]
gi|18152698|emb|CAC83517.1| ribonucleoprotein 1 [Arabidopsis thaliana]
gi|110740752|dbj|BAE98475.1| ribonucleoprotein like protein [Arabidopsis thaliana]
gi|332658011|gb|AEE83411.1| ribonucleoprotein 1 [Arabidopsis thaliana]
Length = 411
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
Query: 49 SEGDSSNTT--IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFAN 100
S GD+ N T IFVGGL P +TDE+ RQ F YG + V I +G GFV F +
Sbjct: 101 SGGDAYNKTKKIFVGGLPPTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDS 160
Query: 101 SLGQIMAINGVGHTMEGKFMMVMGML 126
++ H + GK + V L
Sbjct: 161 EDAVDSVLHKTFHDLSGKQVEVKRAL 186
>gi|363742292|ref|XP_417784.3| PREDICTED: splicing factor, proline- and glutamine-rich [Gallus
gallus]
Length = 647
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG 92
S G+ +N + + P + + +FVG L ++TDED ++ F++YGE V I GKG
Sbjct: 214 SDEGFKANLSLLRRPGEKTYTQRCRLFVGNLPADITDEDFKRLFAKYGEPGEVFINKGKG 273
Query: 93 CGFVQF-ANSLGQIMAINGVGHTMEGKFMMV 122
GF++ + +L +I M G+ + V
Sbjct: 274 FGFIKLESRALAEIAKAELDDTPMRGRQLRV 304
>gi|149018880|gb|EDL77521.1| rCG25679, isoform CRA_b [Rattus norvegicus]
Length = 1028
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD S T +++G ++P + +E L Q F ++G +ASVKI + CGFV
Sbjct: 263 GSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFV 322
Query: 97 QFANSLGQIMAINGVGHTMEGKFMMVMG 124
F N A+ + M F M +G
Sbjct: 323 AFMNRRDAERALKNLNGKMIMSFEMKLG 350
>gi|268561908|ref|XP_002646556.1| Hypothetical protein CBG20414 [Caenorhabditis briggsae]
Length = 308
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG---CGFVQFANSLGQIMAIN 109
++ TIF+G L +V +++L FS+YG I V + G+G GFVQF++S A+
Sbjct: 4 DASDTIFIGNLPGDVREKELDSLFSKYGRINKVDVKSGRGGAAFGFVQFSDSRDADDAVR 63
Query: 110 GV-GHTMEGKFMMV 122
G G+ +GK + V
Sbjct: 64 GRDGYDFDGKRIRV 77
>gi|389749221|gb|EIM90398.1| hypothetical protein STEHIDRAFT_119406 [Stereum hirsutum FP-91666
SS1]
Length = 1317
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R + Y S QG S P P ++ + ++++G LD +VT E L F+ YG
Sbjct: 424 RTPTSYLGAPSQQGRAVS---PKSEPSTQMQAPTRSLWIGNLDSSVTSEQLIHVFAPYGA 480
Query: 82 IASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGKFMMVMGMLFR 128
I S+++ K CGFV F + + A V + + G M G R
Sbjct: 481 IESLRLLPEKECGFVNFVDQGDAVRAKEDVLNRLGGNIGMPNGQTVR 527
>gi|12851175|dbj|BAB28963.1| unnamed protein product [Mus musculus]
gi|148701715|gb|EDL33662.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_b [Mus
musculus]
Length = 276
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 13/73 (17%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANSLGQIMAINGV 111
IFVGGL+P T+E +R+ F Q+GEI ++++P+ +G F+ F + V
Sbjct: 161 IFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEE-------DPV 213
Query: 112 GHTMEGKFMMVMG 124
+E KF V G
Sbjct: 214 KKVLEKKFHTVSG 226
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 40 NGAPG-QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKG 92
NGA G Q S+ + +FVGGL + + +DL+ F+++GE+ I + +G
Sbjct: 58 NGAEGDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRG 117
Query: 93 CGFVQFANSLGQIMAINGVGHTMEGKFM 120
GF+ F +S ++ H ++G+ +
Sbjct: 118 FGFILFKDSSSVEKVLDQKEHRLDGRVI 145
>gi|118380139|ref|XP_001023234.1| hypothetical protein TTHERM_00494500 [Tetrahymena thermophila]
gi|89305001|gb|EAS02989.1| hypothetical protein TTHERM_00494500 [Tetrahymena thermophila
SB210]
Length = 376
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF 98
D + T++++G + P+ T++D Q F +YG I S+KI K C FV F
Sbjct: 241 ADPTITSLYIGNITPDFTEQDFHQIFVKYGPIQSIKIISQKSCAFVNF 288
>gi|148682196|gb|EDL14143.1| mCG119680, isoform CRA_b [Mus musculus]
Length = 509
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 29 QQYSSQG-GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI 87
QQ SSQ G + + P + + + +FVG L P++T+E++R+ F +YG+ V I
Sbjct: 84 QQASSQNEGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFI 143
Query: 88 PVGKGCGFVQF-ANSLGQIMAINGVGHTMEGKFMMV 122
KG GF++ +L +I + + GK + V
Sbjct: 144 HKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRV 179
>gi|440714448|ref|ZP_20895027.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SWK14]
gi|436440644|gb|ELP33948.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SWK14]
Length = 196
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 7/74 (9%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANSLGQIMAIN 109
T I+VG L T+E+LR F QYGE+++V I + +G FV+ A++ G AI
Sbjct: 55 TNIYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAIE 114
Query: 110 GV-GHTMEGKFMMV 122
+ GH ++G+ + V
Sbjct: 115 NLNGHEIDGRSVTV 128
>gi|421614043|ref|ZP_16055112.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SH28]
gi|408495250|gb|EKJ99839.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SH28]
Length = 189
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 7/74 (9%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANSLGQIMAIN 109
T I+VG L T+E+LR F QYGE+++V I + +G FV+ A++ G AI
Sbjct: 55 TNIYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAIE 114
Query: 110 GV-GHTMEGKFMMV 122
+ GH ++G+ + V
Sbjct: 115 NLNGHEIDGRSVTV 128
>gi|417304381|ref|ZP_12091404.1| protein containing RNA recognition motif, RNP-1 domains
[Rhodopirellula baltica WH47]
gi|449136828|ref|ZP_21772190.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula europaea 6C]
gi|327539333|gb|EGF25954.1| protein containing RNA recognition motif, RNP-1 domains
[Rhodopirellula baltica WH47]
gi|448884533|gb|EMB15023.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula europaea 6C]
Length = 195
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 7/74 (9%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANSLGQIMAIN 109
T I+VG L T+E+LR F QYGE+++V I + +G FV+ A++ G AI
Sbjct: 55 TNIYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAIE 114
Query: 110 GV-GHTMEGKFMMV 122
+ GH ++G+ + V
Sbjct: 115 NLNGHEIDGRSVTV 128
>gi|327267007|ref|XP_003218294.1| PREDICTED: u2-associated protein SR140-like [Anolis carolinensis]
Length = 989
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD S T +++G ++P + +E L Q F ++G +ASVKI + CGFV
Sbjct: 222 GSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFV 281
Query: 97 QFANSLGQIMAINGVGHTMEGKFMMVMG 124
F N A+ + M F M +G
Sbjct: 282 AFMNRRDAERALKNLNGKMIMSFEMKLG 309
>gi|170589631|ref|XP_001899577.1| RNA recognition motif. [Brugia malayi]
gi|158593790|gb|EDP32385.1| RNA recognition motif [Brugia malayi]
Length = 287
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 15/113 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ EMNG R +R A RK G ++ + + + A +NT+++V
Sbjct: 164 IEEMNGQMIGRRQIRTNWAV-RKFDGGEENVTYDNIFNATHA-----------ANTSVYV 211
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN---SLGQIMAING 110
GG+ P TDE+L Q FS + V++ +G FV++ N + IM++NG
Sbjct: 212 GGISPITTDEELMQSFSAIATVIEVRLFKQQGYAFVRYLNKDAAARAIMSMNG 264
>gi|195170236|ref|XP_002025919.1| GL10142 [Drosophila persimilis]
gi|194110783|gb|EDW32826.1| GL10142 [Drosophila persimilis]
Length = 956
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 13/85 (15%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD + T +++G L+P ++++ L + F +YG +AS+KI G+ CGFV
Sbjct: 203 GSFDTGDPNTTNLYLGNLNPKISEQQLMETFGRYGPLASIKIMWPRSDEEKARGRNCGFV 262
Query: 97 QFANSLGQIMAINGVGHTMEGKFMM 121
+ + A+ T+ G+++M
Sbjct: 263 AYMSRRDAERAL----RTLNGRYIM 283
>gi|146260280|ref|NP_001041526.1| heterogeneous nuclear ribonucleoprotein A/B isoform 1 [Mus
musculus]
gi|89275690|gb|ABD66224.1| S1 protein C2 [Mus musculus]
gi|148701714|gb|EDL33661.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_a [Mus
musculus]
Length = 332
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 13/73 (17%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANSLGQIMAINGV 111
IFVGGL+P T+E +R+ F Q+GEI ++++P+ +G F+ F + V
Sbjct: 161 IFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEE-------DPV 213
Query: 112 GHTMEGKFMMVMG 124
+E KF V G
Sbjct: 214 KKVLEKKFHTVSG 226
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 40 NGAPG-QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKG 92
NGA G Q S+ + +FVGGL + + +DL+ F+++GE+ I + +G
Sbjct: 58 NGAEGDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRG 117
Query: 93 CGFVQFANSLGQIMAINGVGHTMEGKFM 120
GF+ F +S ++ H ++G+ +
Sbjct: 118 FGFILFKDSSSVEKVLDQKEHRLDGRVI 145
>gi|27695334|gb|AAH43069.1| Hnrpab protein [Mus musculus]
Length = 311
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 13/73 (17%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANSLGQIMAINGV 111
IFVGGL+P T+E +R+ F Q+GEI ++++P+ +G F+ F + V
Sbjct: 161 IFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEE-------DPV 213
Query: 112 GHTMEGKFMMVMG 124
+E KF V G
Sbjct: 214 KKVLEKKFHTVSG 226
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 40 NGAPG-QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKG 92
NGA G Q S+ + +FVGGL + + +DL+ F+++GE+ I + +G
Sbjct: 58 NGAEGDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRG 117
Query: 93 CGFVQFANSLGQIMAINGVGHTMEGKFM 120
GF+ F +S ++ H ++G+ +
Sbjct: 118 FGFILFKDSSSVEKVLDQKEHRLDGRVI 145
>gi|32476441|ref|NP_869435.1| RNA-binding protein [Rhodopirellula baltica SH 1]
gi|32446986|emb|CAD78892.1| RNA-binding protein [Rhodopirellula baltica SH 1]
Length = 206
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 7/74 (9%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANSLGQIMAIN 109
T I+VG L T+E+LR F QYGE+++V I + +G FV+ A++ G AI
Sbjct: 66 TNIYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAIE 125
Query: 110 GV-GHTMEGKFMMV 122
+ GH ++G+ + V
Sbjct: 126 NLNGHEIDGRSVTV 139
>gi|195995479|ref|XP_002107608.1| hypothetical protein TRIADDRAFT_51296 [Trichoplax adhaerens]
gi|190588384|gb|EDV28406.1| hypothetical protein TRIADDRAFT_51296 [Trichoplax adhaerens]
Length = 828
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 9/65 (13%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGC 93
PG G GD + T ++VG L+P++ ++ L + F +YG +ASVKI + C
Sbjct: 188 PGYGSYDTGDPNTTNLYVGNLNPSIDEDYLCKLFGEYGALASVKIMWPRTDEEKKRNRNC 247
Query: 94 GFVQF 98
GFV F
Sbjct: 248 GFVAF 252
>gi|74225210|dbj|BAE38291.1| unnamed protein product [Mus musculus]
Length = 325
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 13/73 (17%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANSLGQIMAINGV 111
IFVGGL+P T+E +R+ F Q+GEI ++++P+ +G F+ F + V
Sbjct: 154 IFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEE-------DPV 206
Query: 112 GHTMEGKFMMVMG 124
+E KF V G
Sbjct: 207 KKVLEKKFHTVSG 219
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 40 NGAPG-QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKG 92
NGA G Q S+ + +FVGGL + + +DL+ F+++GE+ I + +G
Sbjct: 51 NGAEGDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRG 110
Query: 93 CGFVQFANSLGQIMAINGVGHTMEGKFM 120
GF+ F +S ++ H ++G+ +
Sbjct: 111 FGFILFKDSSSVEKVLDQKEHRLDGRVI 138
>gi|158255716|dbj|BAF83829.1| unnamed protein product [Homo sapiens]
Length = 471
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 29 QQYSSQG-GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI 87
QQ SSQ G + + P + + + +FVG L P++T+E++R+ F +YG+ V I
Sbjct: 46 QQASSQNEGLTIDLKNFRKPGEKTFTRRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFI 105
Query: 88 PVGKGCGFVQF-ANSLGQIMAINGVGHTMEGKFMMV 122
KG GF++ +L +I + + GK + V
Sbjct: 106 HKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRV 141
>gi|148682195|gb|EDL14142.1| mCG119680, isoform CRA_a [Mus musculus]
Length = 512
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 29 QQYSSQG-GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI 87
QQ SSQ G + + P + + + +FVG L P++T+E++R+ F +YG+ V I
Sbjct: 87 QQASSQNEGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFI 146
Query: 88 PVGKGCGFVQF-ANSLGQIMAINGVGHTMEGKFMMV 122
KG GF++ +L +I + + GK + V
Sbjct: 147 HKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRV 182
>gi|282896319|ref|ZP_06304341.1| RNA-binding region protein RNP-1 [Raphidiopsis brookii D9]
gi|281198815|gb|EFA73694.1| RNA-binding region protein RNP-1 [Raphidiopsis brookii D9]
Length = 104
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 7/73 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANSLGQIMAING 110
+I+VG L +VT EDL+ FS+YG ++ V++P +G GFV+ +N + AI+
Sbjct: 2 SIYVGNLSYDVTLEDLKSAFSKYGNVSKVQLPTDRETGRPRGFGFVEMSNEAEENAAIDA 61
Query: 111 V-GHTMEGKFMMV 122
+ G +G+ + V
Sbjct: 62 LNGKEFKGRQLKV 74
>gi|291407669|ref|XP_002720131.1| PREDICTED: splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated)-like [Oryctolagus
cuniculus]
Length = 459
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + + P + + + +FVG L P++T+E++R+ F +YG+
Sbjct: 28 RRSEEFSAHAYADEGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGK 87
Query: 82 IASVKIPVGKGCGFVQF-ANSLGQIMAINGVGHTMEGKFMMV 122
V I KG GF++ +L +I + + GK + V
Sbjct: 88 AGEVFIHKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRV 129
>gi|294461052|gb|ADE76094.1| unknown [Picea sitchensis]
Length = 150
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 7/75 (9%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANSLGQIMAI 108
N +FVGGL + ++ LR FS YGEI V++ + KG GFVQFA+ + A+
Sbjct: 34 NKKLFVGGLSFDTNEKVLRDAFSLYGEILEVRVIINRASGLSKGFGFVQFASETDAVNAL 93
Query: 109 NGV-GHTMEGKFMMV 122
+ G +++G+ + V
Sbjct: 94 KEMDGQSLDGRNIRV 108
>gi|224097146|ref|XP_002310851.1| predicted protein [Populus trichocarpa]
gi|222853754|gb|EEE91301.1| predicted protein [Populus trichocarpa]
Length = 289
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%), Gaps = 6/50 (12%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANS 101
IFVGGLD + T+EDLR+ F + GE+ V++ KG FV+FAN
Sbjct: 28 IFVGGLDRDATEEDLRKVFEKIGEVVEVRLHKNLSTNRNKGYAFVKFANK 77
>gi|6754222|ref|NP_034578.1| heterogeneous nuclear ribonucleoprotein A/B isoform 2 [Mus
musculus]
gi|729000|sp|Q99020.1|ROAA_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein A/B;
Short=hnRNP A/B; AltName: Full=CArG-binding factor-A;
Short=CBF-A
gi|220363|dbj|BAA14181.1| CArG-binding factor-A [Mus musculus]
gi|840648|gb|AAA92146.1| CArG box-binding factor [Mus musculus]
gi|12850708|dbj|BAB28821.1| unnamed protein product [Mus musculus]
gi|89275692|gb|ABD66225.1| S1 protein D2 [Mus musculus]
gi|148701716|gb|EDL33663.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_c [Mus
musculus]
Length = 285
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 13/73 (17%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANSLGQIMAINGV 111
IFVGGL+P T+E +R+ F Q+GEI ++++P+ +G F+ F + V
Sbjct: 161 IFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEE-------DPV 213
Query: 112 GHTMEGKFMMVMG 124
+E KF V G
Sbjct: 214 KKVLEKKFHTVSG 226
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 40 NGAPG-QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKG 92
NGA G Q S+ + +FVGGL + + +DL+ F+++GE+ I + +G
Sbjct: 58 NGAEGDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRG 117
Query: 93 CGFVQFANSLGQIMAINGVGHTMEGKFM 120
GF+ F +S ++ H ++G+ +
Sbjct: 118 FGFILFKDSSSVEKVLDQKEHRLDGRVI 145
>gi|388583029|gb|EIM23332.1| hypothetical protein WALSEDRAFT_27430 [Wallemia sebi CBS 633.66]
Length = 1094
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTME 116
++++GGLD T ++L F+ YG I S+++ K CGFV F + A + V H +
Sbjct: 319 SLWIGGLDSRTTAQELMHVFAPYGAIESLRLLTDKECGFVNFVEKSDALRARDDVMHRLG 378
Query: 117 GKF 119
G+
Sbjct: 379 GRI 381
>gi|26345118|dbj|BAC36208.1| unnamed protein product [Mus musculus]
Length = 285
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 13/73 (17%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANSLGQIMAINGV 111
IFVGGL+P T+E +R+ F Q+GEI ++++P+ +G F+ F + V
Sbjct: 161 IFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEE-------DPV 213
Query: 112 GHTMEGKFMMVMG 124
+E KF V G
Sbjct: 214 KKVLEKKFHTVSG 226
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 40 NGAPG-QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKG 92
NGA G Q S+ + +FVGGL + + +DL+ F+++GE+ I + +G
Sbjct: 58 NGAEGDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRG 117
Query: 93 CGFVQFANSLGQIMAINGVGHTMEGKFM 120
GF+ F +S ++ H ++G+ +
Sbjct: 118 FGFILFKDSSSVEKVLDQKEHRLDGRVI 145
>gi|387593127|gb|EIJ88151.1| hypothetical protein NEQG_01595 [Nematocida parisii ERTm3]
gi|387596161|gb|EIJ93783.1| hypothetical protein NEPG_01355 [Nematocida parisii ERTm1]
Length = 316
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 33/48 (68%), Gaps = 6/48 (12%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQF 98
TIF+ GL+ + T+EDLR+ F ++G+I V+IP GKG G+V+F
Sbjct: 91 TIFIKGLNFSATEEDLRELFGKFGDIVEVRIPRSRDGPGGKGFGYVEF 138
>gi|148231899|ref|NP_001080776.1| pre-mRNA-splicing factor RBM22 [Xenopus laevis]
gi|82241534|sp|Q7ZXB5.1|RBM22_XENLA RecName: Full=Pre-mRNA-splicing factor RBM22; AltName:
Full=RNA-binding motif protein 22
gi|28280011|gb|AAH45067.1| Cg14641-prov protein [Xenopus laevis]
Length = 417
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 32/48 (66%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D S TT++VGGL +++ +LR F Q+GEI ++ + + C F+QFA
Sbjct: 228 DKSITTLYVGGLGDTISESELRNHFYQFGEIRTITVVQRQQCAFIQFA 275
>gi|86608641|ref|YP_477403.1| RNA-binding protein [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557183|gb|ABD02140.1| putative RNA-binding protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 94
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANSLGQIMAING 110
TIFVG L ++EDLR F++YG + +K+PV +G FV+ N + AI+
Sbjct: 2 TIFVGNLSFKASEEDLRLVFAEYGTVKQIKLPVDRETGRKRGFAFVELENEADEQKAIDE 61
Query: 111 V-GHTMEGKFMMVMGMLFRH 129
+ G T G+ + V L R
Sbjct: 62 LDGATWMGRDLRVNKALPRQ 81
>gi|4378711|gb|AAD19638.1| nucleic acid binding factor pRM10 [Rattus norvegicus]
Length = 298
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 13/73 (17%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANSLGQIMAINGV 111
IFVGGL+P T+E +R+ F Q+GEI ++++P+ +G F+ F + V
Sbjct: 174 IFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEE-------DPV 226
Query: 112 GHTMEGKFMMVMG 124
+E KF V G
Sbjct: 227 KKVLEKKFHTVSG 239
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 60/128 (46%), Gaps = 10/128 (7%)
Query: 3 EMNGVY-CSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQ---SEGDSSNTTI 58
E+ V+ CSS + + R Q++ +G S G+G Q S+ + +
Sbjct: 31 EVEAVFRCSSSELPNWSCDYRLKVPNQKKNGGRGSRPSGNQNGEGDQINASKNEEDAGKM 90
Query: 59 FVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANSLGQIMAINGVG 112
FVGGL + + +DL+ F+++GE+ I + +G GF+ F +S ++
Sbjct: 91 FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQKE 150
Query: 113 HTMEGKFM 120
H ++G+ +
Sbjct: 151 HRLDGRVI 158
>gi|12850804|dbj|BAB28857.1| unnamed protein product [Mus musculus]
Length = 203
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 29 QQYSSQG-GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI 87
QQ SSQ G + + P + + T +FVG L P++T+E++R+ F +YG+ V I
Sbjct: 48 QQASSQNEGLTIDLKNFRKPGEKTFTQRTRLFVGNLPPDITEEEMRKLFEKYGKAGEVFI 107
Query: 88 PVGKGCGFVQF-ANSLGQIMAINGVGHTMEGKFMMV 122
KG GF+ +L +I + + GK + V
Sbjct: 108 HKDKGFGFINLETRTLAEIAKVELDNMPLRGKQLRV 143
>gi|293334069|ref|NP_001168848.1| uncharacterized protein LOC100382653 [Zea mays]
gi|392351175|ref|XP_003750865.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like isoform
2 [Rattus norvegicus]
gi|6562845|emb|CAB62553.1| heterogeneous nuclear ribonucleoprotein [Rattus norvegicus]
gi|149052496|gb|EDM04313.1| rCG34663, isoform CRA_a [Rattus norvegicus]
gi|223973327|gb|ACN30851.1| unknown [Zea mays]
Length = 332
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 13/73 (17%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANSLGQIMAINGV 111
IFVGGL+P T+E +R+ F Q+GEI ++++P+ +G F+ F + V
Sbjct: 161 IFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEE-------DPV 213
Query: 112 GHTMEGKFMMVMG 124
+E KF V G
Sbjct: 214 KKVLEKKFHTVSG 226
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 40 NGAPG-QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKG 92
NGA G Q S+ + +FVGGL + + +DL+ F+++GE+ I + +G
Sbjct: 58 NGAEGDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRG 117
Query: 93 CGFVQFANSLGQIMAINGVGHTMEGKFM 120
GF+ F +S ++ H ++G+ +
Sbjct: 118 FGFILFKDSSSVEKVLDQKEHRLDGRVI 145
>gi|125586872|gb|EAZ27536.1| hypothetical protein OsJ_11491 [Oryza sativa Japonica Group]
Length = 257
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 29/39 (74%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYAS 39
MTEMNG YCSSRPMRIG A+ +K+ G QQQ S + + S
Sbjct: 219 MTEMNGQYCSSRPMRIGPASNKKNIGGQQQPSGKAFFHS 257
>gi|30584547|gb|AAP36526.1| Homo sapiens non-POU domain containing, octamer-binding [synthetic
construct]
gi|60652579|gb|AAX28984.1| non-POU domain containing octamer-binding [synthetic construct]
Length = 472
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 29 QQYSSQG-GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI 87
QQ SSQ G + + P + + + +FVG L P++T+E++R+ F +YG+ V I
Sbjct: 46 QQASSQNEGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFI 105
Query: 88 PVGKGCGFVQF-ANSLGQIMAINGVGHTMEGKFMMV 122
KG GF++ +L +I + + GK + V
Sbjct: 106 HKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRV 141
>gi|426396354|ref|XP_004064412.1| PREDICTED: non-POU domain-containing octamer-binding protein-like
[Gorilla gorilla gorilla]
Length = 217
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 29 QQYSSQG-GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI 87
QQ SSQ G + + P + + + +FVG L P++T+E++R+ F +YG+ V I
Sbjct: 46 QQASSQNEGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFI 105
Query: 88 PVGKGCGFVQF-ANSLGQIMAINGVGHTMEGKFMMV 122
KG GF++ +L +I + + GK + V
Sbjct: 106 HKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRV 141
>gi|140971918|ref|NP_112620.2| heterogeneous nuclear ribonucleoprotein A/B [Rattus norvegicus]
gi|392351173|ref|XP_003750864.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like isoform
1 [Rattus norvegicus]
gi|6911221|gb|AAF31437.1|AF216753_1 CArG-binding factor A [Rattus norvegicus]
gi|6562847|emb|CAB62554.1| heterogeneous nuclear ribonucleoprotein [Rattus norvegicus]
gi|44890256|gb|AAH66664.1| Hnrpab protein [Rattus norvegicus]
gi|149052497|gb|EDM04314.1| rCG34663, isoform CRA_b [Rattus norvegicus]
Length = 285
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 13/73 (17%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANSLGQIMAINGV 111
IFVGGL+P T+E +R+ F Q+GEI ++++P+ +G F+ F + V
Sbjct: 161 IFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEE-------DPV 213
Query: 112 GHTMEGKFMMVMG 124
+E KF V G
Sbjct: 214 KKVLEKKFHTVSG 226
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 40 NGAPG-QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKG 92
NGA G Q S+ + +FVGGL + + +DL+ F+++GE+ I + +G
Sbjct: 58 NGAEGDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRG 117
Query: 93 CGFVQFANSLGQIMAINGVGHTMEGKFM 120
GF+ F +S ++ H ++G+ +
Sbjct: 118 FGFILFKDSSSVEKVLDQKEHRLDGRVI 145
>gi|410900504|ref|XP_003963736.1| PREDICTED: nucleolysin TIAR-like isoform 1 [Takifugu rubripes]
Length = 386
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P++T ED+R F+ +G I+ ++ KG
Sbjct: 82 NWATSPSCQKKDTSNHFHVFVGDLSPDITTEDIRAAFAPFGHISDARVLKDMATGKSKGY 141
Query: 94 GFVQFANSLGQIMAINGV-GHTMEGK 118
GFV F N L AI+ + G ++G+
Sbjct: 142 GFVSFYNKLDAENAISKMAGQWLQGR 167
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV-GH 113
N T++ GG+ +T+ ++Q FS +G+I +++ KG FV+F++ AI V G
Sbjct: 205 NCTVYCGGIQSGLTEHLMQQTFSPFGQIMEIRVFPDKGYSFVRFSSHDSAAHAIVSVNGT 264
Query: 114 TMEGKFM 120
+EG +
Sbjct: 265 VIEGNLV 271
>gi|444523963|gb|ELV13665.1| U2 snRNP-associated SURP motif-containing protein [Tupaia
chinensis]
Length = 708
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R++ + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 231 RRNMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 288
Query: 82 IASVKI---------PVGKGCGFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
+ASVKI + CGFV F N A+ + M F M +G
Sbjct: 289 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLG 340
>gi|358336337|dbj|GAA54876.1| heterogeneous nuclear ribonucleoprotein D0 [Clonorchis sinensis]
Length = 395
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG------FVQFANSLGQIMAINGV 111
+FVGG+DP+VT+E +R+ FS +G++ S+ +P G FV FA AI
Sbjct: 83 VFVGGIDPDVTEEQIREYFSSFGKVESLDLPFDAQKGRRKHYIFVSFATEAAARKAIALE 142
Query: 112 GHTMEGKFMMVMGMLFRHQMTQACTLQQL 140
+ G+ V + R Q ++ L+Q
Sbjct: 143 RQEIFGRQCDVRVAVTREQASRQKALKQW 171
>gi|77166221|ref|YP_344746.1| RNA-binding protein, RNP-1 [Nitrosococcus oceani ATCC 19707]
gi|254435869|ref|ZP_05049376.1| RNA-binding protein [Nitrosococcus oceani AFC27]
gi|76884535|gb|ABA59216.1| RNA-binding protein, RNP-1 [Nitrosococcus oceani ATCC 19707]
gi|207088980|gb|EDZ66252.1| RNA-binding protein [Nitrosococcus oceani AFC27]
Length = 119
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANSLGQIMAI 108
I+VG L VTDEDLR F YGE++S K+ V KG GFV+ A+ AI
Sbjct: 18 VNIYVGNLSYQVTDEDLRAAFENYGEVSSAKVIVDKFSNRSKGFGFVEMASKEDAEAAI 76
>gi|114053303|ref|NP_001040019.1| non-POU domain-containing octamer-binding protein [Bos taurus]
gi|86821913|gb|AAI05533.1| Non-POU domain containing, octamer-binding [Bos taurus]
gi|296470811|tpg|DAA12926.1| TPA: non-POU domain containing, octamer-binding [Bos taurus]
gi|440901881|gb|ELR52747.1| Non-POU domain-containing octamer-binding protein [Bos grunniens
mutus]
Length = 470
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 29 QQYSSQG-GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI 87
QQ SSQ G + + P + + + +FVG L P++T+E++R+ F +YG+ V I
Sbjct: 45 QQASSQNEGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFI 104
Query: 88 PVGKGCGFVQF-ANSLGQIMAINGVGHTMEGKFMMV 122
KG GF++ +L +I + + GK + V
Sbjct: 105 HKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRV 140
>gi|432875366|ref|XP_004072806.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Oryzias latipes]
Length = 386
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 61/122 (50%), Gaps = 11/122 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ M G + R +R AT RK + Y S + S + S+ SN T++
Sbjct: 153 IQHMGGQWLGGRQIRTNWAT-RKPPAPKTTYESNSKHLSF----EEVMSQSSPSNCTVYC 207
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF---ANSLGQIMAINGV---GHT 114
GG+ +T++ +RQ FS +G+I V++ KG FV+F ++ I+++NG GH
Sbjct: 208 GGVSSGLTEQLMRQTFSAFGQIMEVRVFPDKGYSFVRFNSHESAAHAIVSVNGTSIDGHV 267
Query: 115 ME 116
++
Sbjct: 268 VK 269
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANS 101
Q + S++ +FVG L P +T ED++ F+ +G I+ ++ KG GFV F N
Sbjct: 87 QKKDTSNHFHVFVGDLSPEITTEDVKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNK 146
Query: 102 LGQIMAINGVG 112
AI +G
Sbjct: 147 WDAENAIQHMG 157
>gi|395526496|ref|XP_003765398.1| PREDICTED: splicing factor, proline- and glutamine-rich
[Sarcophilus harrisii]
Length = 492
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 36 GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGF 95
G+ +N + + P + + +FVG L ++TDED ++ F++YGE V I GKG GF
Sbjct: 64 GFKANLSLLRRPGEKTYTQRCRLFVGNLPADITDEDFKRLFAKYGEPGEVFINKGKGFGF 123
Query: 96 VQF-ANSLGQIMAINGVGHTMEGKFMMV 122
++ + +L +I M G+ + V
Sbjct: 124 IKLESRALAEIAKAELDDTPMRGRQLRV 151
>gi|348570524|ref|XP_003471047.1| PREDICTED: non-POU domain-containing octamer-binding protein-like
[Cavia porcellus]
Length = 490
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 29 QQYSSQG-GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI 87
QQ SSQ G + + P + + + +FVG L P++T+E++R+ F +YG+ V I
Sbjct: 65 QQASSQNEGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFI 124
Query: 88 PVGKGCGFVQF-ANSLGQIMAINGVGHTMEGKFMMV 122
KG GF++ +L +I + + GK + V
Sbjct: 125 HKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRV 160
>gi|3377279|dbj|BAA32032.1| AlF-C1 [Rattus norvegicus]
Length = 331
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 13/88 (14%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANSLGQIMAINGV 111
IFVGGL+P T+E +R+ F Q+GEI ++++P+ +G F+ F + V
Sbjct: 160 IFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEE-------DPV 212
Query: 112 GHTMEGKFMMVMGMLFRHQMTQACTLQQ 139
+E KF V G ++ Q + Q
Sbjct: 213 KKVLEKKFHTVSGSKCEIKVAQPKEVYQ 240
Score = 38.9 bits (89), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 40 NGAPG-QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKG 92
NGA G Q S+ + +FVGGL + + +DL+ F+++GE+ I + +G
Sbjct: 57 NGAEGDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRG 116
Query: 93 CGFVQFANSLGQIMAINGVGHTMEGKFM 120
GF+ F +S ++ H ++G+ +
Sbjct: 117 FGFILFKDSSSVEKVLDQKEHRLDGRVI 144
>gi|331237853|ref|XP_003331583.1| hypothetical protein PGTG_13383 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309310573|gb|EFP87164.1| hypothetical protein PGTG_13383 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 351
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 12/88 (13%)
Query: 45 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-------PVG--KGCGF 95
+GP EG+ S T +FV L +VTDE L++ FS Y ++AS + VG KG GF
Sbjct: 237 KGP-PEGEPSQTLLFVANLPFDVTDEKLKEFFSSY-QVASAHVVCRRYGSSVGKSKGFGF 294
Query: 96 VQFANSLGQIMAINGV-GHTMEGKFMMV 122
V+F N Q+ A+ + G ++G+ + V
Sbjct: 295 VEFVNEENQLKALEEIQGKELDGRALHV 322
>gi|74007632|ref|XP_849110.1| PREDICTED: non-POU domain-containing octamer-binding protein
isoform 2 [Canis lupus familiaris]
gi|149758497|ref|XP_001492850.1| PREDICTED: non-POU domain-containing octamer-binding protein
isoform 1 [Equus caballus]
gi|149758499|ref|XP_001492904.1| PREDICTED: non-POU domain-containing octamer-binding protein
isoform 3 [Equus caballus]
gi|149758501|ref|XP_001492878.1| PREDICTED: non-POU domain-containing octamer-binding protein
isoform 2 [Equus caballus]
gi|301787371|ref|XP_002929099.1| PREDICTED: non-POU domain-containing octamer-binding protein-like
[Ailuropoda melanoleuca]
gi|335310107|ref|XP_003361890.1| PREDICTED: non-POU domain-containing octamer-binding protein [Sus
scrofa]
gi|410988796|ref|XP_004000663.1| PREDICTED: non-POU domain-containing octamer-binding protein
isoform 1 [Felis catus]
gi|417515897|gb|JAA53753.1| non-POU domain-containing octamer-binding protein [Sus scrofa]
Length = 470
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 29 QQYSSQG-GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI 87
QQ SSQ G + + P + + + +FVG L P++T+E++R+ F +YG+ V I
Sbjct: 45 QQASSQNEGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFI 104
Query: 88 PVGKGCGFVQF-ANSLGQIMAINGVGHTMEGKFMMV 122
KG GF++ +L +I + + GK + V
Sbjct: 105 HKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRV 140
>gi|74141990|dbj|BAE41058.1| unnamed protein product [Mus musculus]
Length = 528
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 29 QQYSSQG-GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI 87
QQ SSQ G + + P + + + +FVG L P++T+E++R+ F +YG+ V I
Sbjct: 103 QQASSQNEGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFI 162
Query: 88 PVGKGCGFVQF-ANSLGQIMAINGVGHTMEGKFMMV 122
KG GF++ +L +I + + GK + V
Sbjct: 163 HKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRV 198
>gi|34932414|ref|NP_031389.3| non-POU domain-containing octamer-binding protein isoform 1 [Homo
sapiens]
gi|197102787|ref|NP_001124612.1| non-POU domain-containing octamer-binding protein [Pongo abelii]
gi|224028244|ref|NP_001138880.1| non-POU domain-containing octamer-binding protein isoform 1 [Homo
sapiens]
gi|224028246|ref|NP_001138881.1| non-POU domain-containing octamer-binding protein isoform 1 [Homo
sapiens]
gi|109131161|ref|XP_001091069.1| PREDICTED: non-POU domain-containing octamer-binding protein-like
isoform 3 [Macaca mulatta]
gi|109131163|ref|XP_001091198.1| PREDICTED: non-POU domain-containing octamer-binding protein-like
isoform 4 [Macaca mulatta]
gi|109131165|ref|XP_001091316.1| PREDICTED: non-POU domain-containing octamer-binding protein-like
isoform 5 [Macaca mulatta]
gi|114689043|ref|XP_001136666.1| PREDICTED: non-POU domain-containing octamer-binding protein
isoform 4 [Pan troglodytes]
gi|114689045|ref|XP_001137135.1| PREDICTED: non-POU domain-containing octamer-binding protein
isoform 8 [Pan troglodytes]
gi|296235735|ref|XP_002763022.1| PREDICTED: non-POU domain-containing octamer-binding protein
isoform 1 [Callithrix jacchus]
gi|332247208|ref|XP_003272746.1| PREDICTED: non-POU domain-containing octamer-binding protein
isoform 1 [Nomascus leucogenys]
gi|332247210|ref|XP_003272747.1| PREDICTED: non-POU domain-containing octamer-binding protein
isoform 2 [Nomascus leucogenys]
gi|332247212|ref|XP_003272748.1| PREDICTED: non-POU domain-containing octamer-binding protein
isoform 3 [Nomascus leucogenys]
gi|390479908|ref|XP_003735807.1| PREDICTED: non-POU domain-containing octamer-binding protein
isoform 2 [Callithrix jacchus]
gi|397498845|ref|XP_003820184.1| PREDICTED: non-POU domain-containing octamer-binding protein
isoform 1 [Pan paniscus]
gi|397498847|ref|XP_003820185.1| PREDICTED: non-POU domain-containing octamer-binding protein
isoform 2 [Pan paniscus]
gi|397498849|ref|XP_003820186.1| PREDICTED: non-POU domain-containing octamer-binding protein
isoform 3 [Pan paniscus]
gi|402910484|ref|XP_003917906.1| PREDICTED: non-POU domain-containing octamer-binding protein-like
isoform 1 [Papio anubis]
gi|402910486|ref|XP_003917907.1| PREDICTED: non-POU domain-containing octamer-binding protein-like
isoform 2 [Papio anubis]
gi|67460768|sp|Q5RFL9.3|NONO_PONAB RecName: Full=Non-POU domain-containing octamer-binding protein;
Short=NonO protein
gi|67469924|sp|Q15233.4|NONO_HUMAN RecName: Full=Non-POU domain-containing octamer-binding protein;
Short=NonO protein; AltName: Full=54 kDa nuclear RNA-
and DNA-binding protein; AltName: Full=55 kDa nuclear
protein; AltName: Full=DNA-binding p52/p100 complex, 52
kDa subunit; AltName: Full=NMT55; AltName:
Full=p54(nrb); Short=p54nrb
gi|1895081|gb|AAC51852.1| nuclear matrix protein 55 [Homo sapiens]
gi|12803121|gb|AAH02364.1| Non-POU domain containing, octamer-binding [Homo sapiens]
gi|13111917|gb|AAH03129.1| NONO protein [Homo sapiens]
gi|15082448|gb|AAH12141.1| NONO protein [Homo sapiens]
gi|20271432|gb|AAH28299.1| Non-POU domain containing, octamer-binding [Homo sapiens]
gi|46854868|gb|AAH69616.1| Non-POU domain containing, octamer-binding [Homo sapiens]
gi|46854873|gb|AAH69639.1| Non-POU domain containing, octamer-binding [Homo sapiens]
gi|48145639|emb|CAG33042.1| NONO [Homo sapiens]
gi|55725143|emb|CAH89438.1| hypothetical protein [Pongo abelii]
gi|119625703|gb|EAX05298.1| non-POU domain containing, octamer-binding, isoform CRA_a [Homo
sapiens]
gi|119625704|gb|EAX05299.1| non-POU domain containing, octamer-binding, isoform CRA_a [Homo
sapiens]
gi|119625705|gb|EAX05300.1| non-POU domain containing, octamer-binding, isoform CRA_a [Homo
sapiens]
gi|208965286|dbj|BAG72657.1| non-POU domain containing, octamer-binding protein [synthetic
construct]
gi|355704910|gb|EHH30835.1| Non-POU domain-containing octamer-binding protein [Macaca mulatta]
gi|355757454|gb|EHH60979.1| Non-POU domain-containing octamer-binding protein [Macaca
fascicularis]
gi|380784065|gb|AFE63908.1| non-POU domain-containing octamer-binding protein isoform 1 [Macaca
mulatta]
gi|410213274|gb|JAA03856.1| non-POU domain containing, octamer-binding [Pan troglodytes]
gi|410213276|gb|JAA03857.1| non-POU domain containing, octamer-binding [Pan troglodytes]
gi|410213278|gb|JAA03858.1| non-POU domain containing, octamer-binding [Pan troglodytes]
gi|410265006|gb|JAA20469.1| non-POU domain containing, octamer-binding [Pan troglodytes]
gi|410265008|gb|JAA20470.1| non-POU domain containing, octamer-binding [Pan troglodytes]
gi|410265010|gb|JAA20471.1| non-POU domain containing, octamer-binding [Pan troglodytes]
gi|410265012|gb|JAA20472.1| non-POU domain containing, octamer-binding [Pan troglodytes]
gi|410265014|gb|JAA20473.1| non-POU domain containing, octamer-binding [Pan troglodytes]
Length = 471
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 29 QQYSSQG-GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI 87
QQ SSQ G + + P + + + +FVG L P++T+E++R+ F +YG+ V I
Sbjct: 46 QQASSQNEGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFI 105
Query: 88 PVGKGCGFVQF-ANSLGQIMAINGVGHTMEGKFMMV 122
KG GF++ +L +I + + GK + V
Sbjct: 106 HKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRV 141
>gi|432096328|gb|ELK27089.1| Non-POU domain-containing octamer-binding protein [Myotis davidii]
Length = 470
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 29 QQYSSQG-GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI 87
QQ SSQ G + + P + + + +FVG L P++T+E++R+ F +YG+ V I
Sbjct: 45 QQASSQNEGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFI 104
Query: 88 PVGKGCGFVQF-ANSLGQIMAINGVGHTMEGKFMMV 122
KG GF++ +L +I + + GK + V
Sbjct: 105 HKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRV 140
>gi|426257202|ref|XP_004022221.1| PREDICTED: non-POU domain-containing octamer-binding protein
isoform 1 [Ovis aries]
gi|426257204|ref|XP_004022222.1| PREDICTED: non-POU domain-containing octamer-binding protein
isoform 2 [Ovis aries]
Length = 470
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 29 QQYSSQG-GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI 87
QQ SSQ G + + P + + + +FVG L P++T+E++R+ F +YG+ V I
Sbjct: 45 QQASSQNEGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFI 104
Query: 88 PVGKGCGFVQF-ANSLGQIMAINGVGHTMEGKFMMV 122
KG GF++ +L +I + + GK + V
Sbjct: 105 HKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRV 140
>gi|291414362|ref|XP_002723429.1| PREDICTED: non-POU domain containing, octamer-binding-like
[Oryctolagus cuniculus]
Length = 470
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 29 QQYSSQG-GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI 87
QQ SSQ G + + P + + + +FVG L P++T+E++R+ F +YG+ V I
Sbjct: 45 QQASSQNEGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFI 104
Query: 88 PVGKGCGFVQF-ANSLGQIMAINGVGHTMEGKFMMV 122
KG GF++ +L +I + + GK + V
Sbjct: 105 HKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRV 140
>gi|343961801|dbj|BAK62488.1| non-POU domain-containing octamer-binding protein [Pan troglodytes]
Length = 471
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 29 QQYSSQG-GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI 87
QQ SSQ G + + P + + + +FVG L P++T+E++R+ F +YG+ V I
Sbjct: 46 QQASSQNEGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFI 105
Query: 88 PVGKGCGFVQF-ANSLGQIMAINGVGHTMEGKFMMV 122
KG GF++ +L +I + + GK + V
Sbjct: 106 HKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRV 141
>gi|74145658|dbj|BAE36217.1| unnamed protein product [Mus musculus]
Length = 473
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 29 QQYSSQG-GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI 87
QQ SSQ G + + P + + + +FVG L P++T+E++R+ F +YG+ V I
Sbjct: 48 QQASSQNEGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFI 107
Query: 88 PVGKGCGFVQF-ANSLGQIMAINGVGHTMEGKFMMV 122
KG GF++ +L +I + + GK + V
Sbjct: 108 HKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRV 143
>gi|410900508|ref|XP_003963738.1| PREDICTED: nucleolysin TIAR-like isoform 3 [Takifugu rubripes]
Length = 395
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P++T ED+R F+ +G I+ ++ KG
Sbjct: 80 NWATSPSCQKKDTSNHFHVFVGDLSPDITTEDIRAAFAPFGHISDARVLKDMATGKSKGY 139
Query: 94 GFVQFANSLGQIMAINGV-GHTMEGK 118
GFV F N L AI+ + G ++G+
Sbjct: 140 GFVSFYNKLDAENAISKMAGQWLQGR 165
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV-GH 113
N T++ GG+ +T+ ++Q FS +G+I +++ KG FV+F++ AI V G
Sbjct: 203 NCTVYCGGIQSGLTEHLMQQTFSPFGQIMEIRVFPDKGYSFVRFSSHDSAAHAIVSVNGT 262
Query: 114 TMEGKFM 120
+EG +
Sbjct: 263 VIEGNLV 269
>gi|67970671|dbj|BAE01678.1| unnamed protein product [Macaca fascicularis]
Length = 471
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 29 QQYSSQG-GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI 87
QQ SSQ G + + P + + + +FVG L P++T+E++R+ F +YG+ V I
Sbjct: 46 QQASSQNEGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRRLFEKYGKAGEVFI 105
Query: 88 PVGKGCGFVQF-ANSLGQIMAINGVGHTMEGKFMMV 122
KG GF++ +L +I + + GK + V
Sbjct: 106 HKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRV 141
>gi|222824844|emb|CAM12246.2| RNA binding protein 4 [Danio rerio]
Length = 99
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 44/94 (46%), Gaps = 12/94 (12%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEG 117
IFVG L PN T E++R FSQYG+I+ I K GFV + AI + H M
Sbjct: 4 IFVGNLSPNTTAEEIRSLFSQYGKISECDIV--KNFGFVHMDSKSEADEAIQNLHHYMLN 61
Query: 118 KFMMVMGM----------LFRHQMTQACTLQQLR 141
M + M L ++ +CT Q+LR
Sbjct: 62 GMAMNVEMSKGKPKTSTKLHVGNISSSCTNQELR 95
>gi|348239|gb|AAC37578.1| unnamed protein product [Homo sapiens]
Length = 471
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 29 QQYSSQG-GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI 87
QQ SSQ G + + P + + + +FVG L P++T+E++R+ F +YG+ V I
Sbjct: 46 QQASSQNEGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFI 105
Query: 88 PVGKGCGFVQF-ANSLGQIMAINGVGHTMEGKFMMV 122
KG GF++ +L +I + + GK + V
Sbjct: 106 HKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRV 141
>gi|350396366|ref|XP_003484530.1| PREDICTED: RNA-binding protein squid-like isoform 2 [Bombus
impatiens]
Length = 362
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 43/85 (50%), Gaps = 12/85 (14%)
Query: 35 GGYASNGAPGQGPQSEG---DSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG 90
G A NG Q +S G DS N +FVGGL TD++LR F YG+I S+ +
Sbjct: 29 GDAAENGQESQEDRSTGGNQDSLNDRKLFVGGLSWETTDKELRDHFGTYGDIESINVKTD 88
Query: 91 ------KGCGFVQF--ANSLGQIMA 107
+G F+ F A SL +IMA
Sbjct: 89 PNTGRSRGFAFIVFAKAESLDKIMA 113
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 24/34 (70%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK 91
+FVGGL ++D+D++ FSQ+G I V++P K
Sbjct: 136 VFVGGLSTELSDDDIKHFFSQFGTIVEVEMPFDK 169
>gi|398406192|ref|XP_003854562.1| hypothetical protein MYCGRDRAFT_69454 [Zymoseptoria tritici IPO323]
gi|339474445|gb|EGP89538.1| hypothetical protein MYCGRDRAFT_69454 [Zymoseptoria tritici IPO323]
Length = 780
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 32/65 (49%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEG 117
++VG LD + ++ LRQ F +YG+I V K C FV F N I AI V E
Sbjct: 458 VYVGNLDESWNEDRLRQDFQEYGDIELVNTLREKSCAFVNFTNIANAIKAIEAVRGKEEY 517
Query: 118 KFMMV 122
K V
Sbjct: 518 KRFKV 522
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMA 107
Q G S N +++G L T++++R+ S++G I +VK+ K GFV F + I A
Sbjct: 225 QQSGASRN--VYLGNLPEETTEDEIREDLSKFGPIDTVKLVREKSIGFVHFLSIGNAIKA 282
Query: 108 I 108
+
Sbjct: 283 V 283
>gi|74203206|dbj|BAE26278.1| unnamed protein product [Mus musculus]
Length = 475
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 29 QQYSSQG-GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI 87
QQ SSQ G + + P + + + +FVG L P++T+E++R+ F +YG+ V I
Sbjct: 50 QQASSQNEGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFI 109
Query: 88 PVGKGCGFVQF-ANSLGQIMAINGVGHTMEGKFMMV 122
KG GF++ +L +I + + GK + V
Sbjct: 110 HKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRV 145
>gi|255958247|ref|NP_075633.2| non-POU domain-containing octamer-binding protein [Mus musculus]
gi|357394934|ref|NP_001239447.1| non-POU domain-containing octamer-binding protein [Mus musculus]
gi|67460966|sp|Q99K48.3|NONO_MOUSE RecName: Full=Non-POU domain-containing octamer-binding protein;
Short=NonO protein
gi|13529479|gb|AAH05465.1| Non-POU-domain-containing, octamer binding protein [Mus musculus]
gi|26390393|dbj|BAC25890.1| unnamed protein product [Mus musculus]
gi|53237043|gb|AAH83074.1| Non-POU-domain-containing, octamer binding protein [Mus musculus]
gi|71059811|emb|CAJ18449.1| Nono [Mus musculus]
gi|74191141|dbj|BAE39402.1| unnamed protein product [Mus musculus]
Length = 473
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 29 QQYSSQG-GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI 87
QQ SSQ G + + P + + + +FVG L P++T+E++R+ F +YG+ V I
Sbjct: 48 QQASSQNEGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFI 107
Query: 88 PVGKGCGFVQF-ANSLGQIMAINGVGHTMEGKFMMV 122
KG GF++ +L +I + + GK + V
Sbjct: 108 HKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRV 143
>gi|313240136|emb|CBY32488.1| unnamed protein product [Oikopleura dioica]
Length = 552
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 47 PQSEGDSSNTT----IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSL 102
P+ E S +T +FVGGL +T E +RQ F ++GE+ V IP GK F++ N +
Sbjct: 102 PEKEEGSQESTGQSRLFVGGLPEAITQEQVRQMFQKFGEVKEVYIPQGKTFAFIKMTNRM 161
Query: 103 GQIMAINGV-GHTMEGK 118
A G+ G T+ G+
Sbjct: 162 QADQAKYGLSGKTIAGQ 178
>gi|452821825|gb|EME28851.1| glycine-rich RNA binding protein isoform 1 [Galdieria sulphuraria]
Length = 149
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 50/86 (58%), Gaps = 11/86 (12%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFA--NSLGQ- 104
+ +FVGGL +V ++DLR+ FS+YGE+ ++ V +G GFV +A +S+ +
Sbjct: 5 EDNRVFVGGLPWSVGEDDLRETFSKYGEVVDARVVVERETGRSRGFGFVSYAEGSSVEEC 64
Query: 105 IMAINGVGHTMEGKFMMVMGMLFRHQ 130
I A++ G M+G+ + V + R Q
Sbjct: 65 IAALD--GQDMQGRTIRVNKAMSREQ 88
>gi|313225133|emb|CBY20926.1| unnamed protein product [Oikopleura dioica]
Length = 552
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 47 PQSEGDSSNTT----IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSL 102
P+ E S +T +FVGGL +T E +RQ F ++GE+ V IP GK F++ N +
Sbjct: 102 PEKEEGSQESTGQSRLFVGGLPEAITQEQVRQMFQKFGEVKEVYIPQGKTFAFIKMTNRM 161
Query: 103 GQIMAINGV-GHTMEGK 118
A G+ G T+ G+
Sbjct: 162 QADQAKYGLSGKTIAGQ 178
>gi|395858895|ref|XP_003801790.1| PREDICTED: non-POU domain-containing octamer-binding protein
isoform 1 [Otolemur garnettii]
gi|395858897|ref|XP_003801791.1| PREDICTED: non-POU domain-containing octamer-binding protein
isoform 2 [Otolemur garnettii]
gi|395858899|ref|XP_003801792.1| PREDICTED: non-POU domain-containing octamer-binding protein
isoform 3 [Otolemur garnettii]
Length = 470
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 29 QQYSSQG-GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI 87
QQ SSQ G + + P + + + +FVG L P++T+E++R+ F +YG+ V I
Sbjct: 45 QQASSQNEGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFI 104
Query: 88 PVGKGCGFVQF-ANSLGQIMAINGVGHTMEGKFMMV 122
KG GF++ +L +I + + GK + V
Sbjct: 105 HKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRV 140
>gi|344282028|ref|XP_003412777.1| PREDICTED: non-POU domain-containing octamer-binding protein-like
[Loxodonta africana]
Length = 472
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 29 QQYSSQG-GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI 87
QQ SSQ G + + P + + + +FVG L P++T+E++R+ F +YG+ V I
Sbjct: 47 QQASSQNEGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFI 106
Query: 88 PVGKGCGFVQF-ANSLGQIMAINGVGHTMEGKFMMV 122
KG GF++ +L +I + + GK + V
Sbjct: 107 HKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRV 142
>gi|300113043|ref|YP_003759618.1| RNP-1 like RNA-binding protein [Nitrosococcus watsonii C-113]
gi|299538980|gb|ADJ27297.1| RNP-1 like RNA-binding protein [Nitrosococcus watsonii C-113]
Length = 118
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANSLGQIMAI 108
I+VG L VTDEDLR F YGE++S K+ V KG GFV+ A+ AI
Sbjct: 18 VNIYVGNLSYQVTDEDLRAAFENYGEVSSAKVIVDKFSNRSKGFGFVEMASKEDAETAI 76
>gi|351710568|gb|EHB13487.1| Non-POU domain-containing octamer-binding protein [Heterocephalus
glaber]
Length = 471
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 29 QQYSSQG-GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI 87
QQ SSQ G + + P + + + +FVG L P++T+E++R+ F +YG+ V I
Sbjct: 46 QQASSQNEGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFI 105
Query: 88 PVGKGCGFVQF-ANSLGQIMAINGVGHTMEGKFMMV 122
KG GF++ +L +I + + GK + V
Sbjct: 106 HKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRV 141
>gi|189197841|ref|XP_001935258.1| CCCH zinc finger and RRM domain containing protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187981206|gb|EDU47832.1| CCCH zinc finger and RRM domain containing protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 612
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 33/106 (31%), Positives = 48/106 (45%), Gaps = 6/106 (5%)
Query: 18 AATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGL-DPNVTDEDLRQPF 76
A P S Q S++GG A P D SNTT+ V + +PN +E +R F
Sbjct: 293 AVKPNGSKARGQHRSTRGGKARTKFP-----PSQDPSNTTLVVDHIPEPNCNEESVRSYF 347
Query: 77 SQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEGKFMMV 122
S++G I V++ K V+FA+ A N E +F+ V
Sbjct: 348 SEFGSILEVEMHADKHLAIVKFADRPAAKRAKNSPKAVFENRFVKV 393
>gi|123455020|ref|XP_001315258.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121897929|gb|EAY03035.1| hypothetical protein TVAG_143350 [Trichomonas vaginalis G3]
Length = 156
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG-----KGCGFVQFANSLGQIM 106
D + T++VG L + ++ L+ F +YG I SV+IP KG GFV+F N
Sbjct: 22 DKTKCTVYVGSLSWSTNEDGLKAVFEKYGNITSVRIPRNDRDQSKGFGFVEFENEEDAKK 81
Query: 107 AINGVGHTMEGKFMMV 122
A G +EG+ + V
Sbjct: 82 ACEMDGTELEGRALKV 97
>gi|59891440|ref|NP_001012356.1| non-POU domain-containing octamer-binding protein [Rattus
norvegicus]
gi|67460593|sp|Q5FVM4.3|NONO_RAT RecName: Full=Non-POU domain-containing octamer-binding protein;
Short=NonO protein
gi|58476510|gb|AAH89880.1| Non-POU domain containing, octamer-binding [Rattus norvegicus]
gi|149042186|gb|EDL95893.1| rCG36231, isoform CRA_b [Rattus norvegicus]
Length = 476
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 29 QQYSSQG-GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI 87
QQ SSQ G + + P + + + +FVG L P++T+E++R+ F +YG+ V I
Sbjct: 51 QQASSQNEGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFI 110
Query: 88 PVGKGCGFVQF-ANSLGQIMAINGVGHTMEGKFMMV 122
KG GF++ +L +I + + GK + V
Sbjct: 111 HKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRV 146
>gi|328865488|gb|EGG13874.1| CCCH-type zinc finger-containing protein [Dictyostelium
fasciculatum]
Length = 389
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 32 SSQGGYASNG---APGQGPQSEGDSSNTTIFVGGLDPN-VTDEDLRQPFSQYGEIASVKI 87
+ GG A NG P+ D S +T+F+ +DP+ VT+ DLR F +G I S+K+
Sbjct: 198 TDNGGGALNGDGTRTKTAPRPPADRSISTLFLANVDPDQVTESDLRSSFLSFGNIRSIKL 257
Query: 88 PVGKGCGFVQF 98
K C FV F
Sbjct: 258 LHDKKCAFVVF 268
>gi|110758129|ref|XP_392465.3| PREDICTED: RNA-binding protein squid-like isoform 1 [Apis
mellifera]
Length = 358
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 43/85 (50%), Gaps = 12/85 (14%)
Query: 35 GGYASNGAPGQGPQSEG---DSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG 90
G A NG Q +S G DS N +FVGGL TD++LR F YG+I S+ +
Sbjct: 29 GDAAENGQESQEERSTGGNQDSLNDRKLFVGGLSWETTDKELRDHFGTYGDIESINVKTD 88
Query: 91 ------KGCGFVQF--ANSLGQIMA 107
+G F+ F A SL +IMA
Sbjct: 89 PNTGRSRGFAFIVFAKAESLDKIMA 113
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK 91
IFVGGL ++D+D++ FSQ+G I V++P K
Sbjct: 136 IFVGGLSTELSDDDIKNFFSQFGTIVEVEMPFDK 169
>gi|403305174|ref|XP_003943145.1| PREDICTED: non-POU domain-containing octamer-binding protein
isoform 1 [Saimiri boliviensis boliviensis]
gi|403305176|ref|XP_003943146.1| PREDICTED: non-POU domain-containing octamer-binding protein
isoform 2 [Saimiri boliviensis boliviensis]
Length = 471
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 29 QQYSSQG-GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI 87
QQ SSQ G + + P + + + +FVG L P++T+E++R+ F +YG+ V I
Sbjct: 46 QQASSQNEGLTIDLKNFRKPGEKTFTQQSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFI 105
Query: 88 PVGKGCGFVQF-ANSLGQIMAINGVGHTMEGKFMMV 122
KG GF++ +L +I + + GK + V
Sbjct: 106 HKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRV 141
>gi|365986018|ref|XP_003669841.1| hypothetical protein NDAI_0D02840 [Naumovozyma dairenensis CBS 421]
gi|343768610|emb|CCD24598.1| hypothetical protein NDAI_0D02840 [Naumovozyma dairenensis CBS 421]
Length = 426
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 53/117 (45%), Gaps = 20/117 (17%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ EM G RP+ + +T + + GG G P D T+F+
Sbjct: 229 IQEMQGKEIDGRPINVDMSTSKPA----------GGNDRAKKFGDVPSEPSD----TLFL 274
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANSLGQIMAINGV 111
G L N +++ + FS+YGEI SV+IP KG G+VQF+N A+ G+
Sbjct: 275 GNLSFNADKDNIYETFSKYGEIISVRIPTHPETEQPKGFGYVQFSNIEDAKKALEGL 331
>gi|62511030|sp|Q6IQ97.1|RBM41_DANRE RecName: Full=RNA-binding protein 4.1; AltName: Full=RNA-binding
motif protein 4.1
gi|47940417|gb|AAH71513.1| RNA binding motif protein 4.1 [Danio rerio]
gi|160774000|gb|AAI55176.1| RNA binding motif protein 4.1 [Danio rerio]
Length = 419
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 44/94 (46%), Gaps = 12/94 (12%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEG 117
IFVG L PN T E++R FSQYG+I+ I K GFV + AI + H M
Sbjct: 4 IFVGNLSPNTTAEEIRSLFSQYGKISECDIV--KNFGFVHMDSKSEADEAIQNLHHYMLN 61
Query: 118 KFMMVMGM----------LFRHQMTQACTLQQLR 141
M + M L ++ +CT Q+LR
Sbjct: 62 GMAMNVEMSKGKPKTSTKLHVGNISSSCTNQELR 95
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGH 113
++T + VG + + T+++LR F +YG + V+ + K FV + AI+G+ +
Sbjct: 76 TSTKLHVGNISSSCTNQELRAKFEEYGPV--VECDIVKDYAFVHMERVEDAMEAISGLDN 133
Query: 114 T-MEGKFMMV 122
T +GK M V
Sbjct: 134 TAFQGKLMSV 143
>gi|407038416|gb|EKE39116.1| RNA-binding protein TIA-1, putative [Entamoeba nuttalli P19]
Length = 306
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 10/108 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
M MNG R +++ T +S +Q S +E S N T+++
Sbjct: 187 MQMMNGEKLEGRNIKVNWVTSNIASKTEQPKRSYDEI----------NNETSSQNCTVYI 236
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
G + NV +DL+Q ++YG I V++ KG F++F+ AI
Sbjct: 237 GNIPKNVESDDLKQLLAEYGSIEEVRLNKDKGYAFIKFSKHESATSAI 284
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANSLGQIMAI 108
N IFVGGL P V D+ L + F ++G + ++ KG GFV F A+
Sbjct: 128 NYKIFVGGLQPEVNDDLLYKTFQKFGRVTDARVLKFTQTGKSKGYGFVTFIRKEDAETAM 187
Query: 109 NGV-GHTMEGKFMMV 122
+ G +EG+ + V
Sbjct: 188 QMMNGEKLEGRNIKV 202
>gi|403177108|ref|XP_003335681.2| hypothetical protein PGTG_17119 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375172734|gb|EFP91262.2| hypothetical protein PGTG_17119 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 477
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 58 IFVGGLDPNVTDED--LRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTM 115
+++G +D T ++ +RQ FSQYGEI V + K C FV F N I AI G+
Sbjct: 320 VYIGQIDDMETFDEARIRQDFSQYGEIELVNLLKEKNCAFVNFTNIANSIKAIEGIKQNE 379
Query: 116 E-GKFMMVMG 124
E KF + G
Sbjct: 380 EYSKFKIAYG 389
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF 98
Q G + N +++G L+ VT++ LR S+YG I VKI K GFV F
Sbjct: 99 QQNGATRN--VYLGNLEETVTEQSLRDDLSRYGPIDQVKIVRDKNIGFVHF 147
>gi|358349448|ref|XP_003638749.1| RNA-binding protein [Medicago truncatula]
gi|355504684|gb|AES85887.1| RNA-binding protein [Medicago truncatula]
Length = 371
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 43/93 (46%), Gaps = 18/93 (19%)
Query: 25 SGYQQQYSSQGGYASNGAP----------GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQ 74
S Y + YA+ GAP G+G + G S IFVG L P T EDLR
Sbjct: 187 SAYSTYIPASTRYAALGAPTMYDRPSSIYGRGEPARGISKK--IFVGRLPPEATTEDLRL 244
Query: 75 PFSQYGEIASVKIPVG------KGCGFVQFANS 101
F ++G I V IP +G GFV FA+S
Sbjct: 245 YFGRFGHILDVYIPRDVKRPGHRGFGFVTFADS 277
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 6/52 (11%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANS 101
T IFV + P+VT+E R F +YG+I + +P +G GF+ FA +
Sbjct: 92 TRIFVARIAPSVTEETFRSHFEKYGDITDLYMPKDRGSKTHRGIGFITFATA 143
>gi|294884882|gb|ADF47449.1| TIA1-like protein [Dugesia japonica]
Length = 383
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 14/111 (12%)
Query: 1 MTEMNGVYCSSRPMRIGAAT---PRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTT 57
+ +MNG + +R +R A P+ Q+ +A++ SN T
Sbjct: 171 LNKMNGKFLGTRQIRTNWAIRRPPQPPGKDQKPLDYNEVFAASS-----------ESNCT 219
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
I+VGG+ + +E LR+ F ++G+I V+I KG FV+F + G AI
Sbjct: 220 IYVGGITNGLCEELLRESFKEFGDILEVRIFKEKGYAFVRFDSHEGATQAI 270
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 11/86 (12%)
Query: 42 APGQGPQSEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCG 94
AP ++ D+SN IFVG + P + + LR+ FS +G + KI KG G
Sbjct: 98 APINNISTQEDTSNHYHIFVGDIAPEIETQFLRERFSLFGRVTECKIIKDMHTQKPKGYG 157
Query: 95 FVQFANSLGQIMAINGVGHTMEGKFM 120
FV +A A+N M GKF+
Sbjct: 158 FVAYATKEEAEEALN----KMNGKFL 179
>gi|407308|gb|AAA03427.1| 54 kDa protein [Homo sapiens]
gi|2808511|emb|CAA72157.1| p54nrb [Homo sapiens]
Length = 471
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 29 QQYSSQG-GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI 87
QQ SSQ G + + P + + + +FVG L P++T+E++R+ F +YG+ V I
Sbjct: 46 QQASSQNEGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFI 105
Query: 88 PVGKGCGFVQF-ANSLGQIMAINGVGHTMEGKFMMV 122
KG GF++ +L +I + + GK + V
Sbjct: 106 HKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRV 141
>gi|74141807|dbj|BAE40976.1| unnamed protein product [Mus musculus]
Length = 473
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 29 QQYSSQG-GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI 87
QQ SSQ G + + P + + + +FVG L P++T+E++R+ F +YG+ V I
Sbjct: 48 QQASSQNEGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFI 107
Query: 88 PVGKGCGFVQF-ANSLGQIMAINGVGHTMEGKFMMV 122
KG GF++ +L +I + + GK + V
Sbjct: 108 HKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRV 143
>gi|218192062|gb|EEC74489.1| hypothetical protein OsI_09957 [Oryza sativa Indica Group]
Length = 191
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 7/66 (10%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANSLGQIMAINGV 111
+FVGG+ P DEDLR+ F Q+G +ASV +P+ + G F+QF L ++
Sbjct: 9 MFVGGIGPYTGDEDLRRHFQQFGYVASVHMPIDRHTGRHHGFAFIQF-TCLEHLINALAY 67
Query: 112 GHTMEG 117
HT+ G
Sbjct: 68 RHTIHG 73
>gi|67465872|ref|XP_649094.1| RNA-binding protein TIA-1 [Entamoeba histolytica HM-1:IMSS]
gi|56465456|gb|EAL43711.1| RNA-binding protein TIA-1, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449705857|gb|EMD45818.1| RNA-binding protein TIA-1, putative [Entamoeba histolytica KU27]
Length = 306
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 10/108 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
M MNG R +++ T +S +Q S +E S N T+++
Sbjct: 187 MQMMNGEKLEGRNIKVNWVTSNIASKTEQPKRSYDEI----------NNETSSQNCTVYI 236
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
G + NV +DL+Q ++YG I V++ KG F++F+ AI
Sbjct: 237 GNIPKNVESDDLKQLLAEYGSIEEVRLNKDKGYAFIKFSKHESATSAI 284
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANSLGQIMAI 108
N IFVGGL P V D+ L + F ++G + ++ KG GFV F A+
Sbjct: 128 NYKIFVGGLQPEVNDDLLYKTFQKFGRVTDARVLKFTQTGKSKGYGFVTFIRKEDAETAM 187
Query: 109 NGV-GHTMEGKFMMV 122
+ G +EG+ + V
Sbjct: 188 QMMNGEKLEGRNIKV 202
>gi|241044154|ref|XP_002407174.1| proline and glutamine-rich splicing factor (SFPQ), putative [Ixodes
scapularis]
gi|215492126|gb|EEC01767.1| proline and glutamine-rich splicing factor (SFPQ), putative [Ixodes
scapularis]
Length = 670
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 42 APGQG---PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF 98
+P QG PQ + + +FVG L P++T+E+ R+ FS YGE+ V + KG GF+++
Sbjct: 270 SPQQGMAPPQPKRSGARCRLFVGNLAPSMTEEEFRKLFSAYGELVEVFLHSQKGFGFIKY 329
>gi|356541820|ref|XP_003539370.1| PREDICTED: DAZ-associated protein 1-like [Glycine max]
Length = 365
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 43/88 (48%), Gaps = 13/88 (14%)
Query: 27 YQQQYSSQGGYASNGAP----GQGP-QSEGDSSNTT--IFVGGLDPNVTDEDLRQPFSQY 79
Y S+ YA+ GAP GP GD+ T+ IFVG L P T +DLRQ F ++
Sbjct: 195 YNAYISAATRYAALGAPTLYDHPGPIYGRGDARRTSKKIFVGRLPPEATSDDLRQYFGRF 254
Query: 80 GEIASVKIPVG------KGCGFVQFANS 101
G I V +P +G GFV FA
Sbjct: 255 GRILDVYVPRDPKRAGHRGFGFVTFAED 282
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 6/52 (11%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANS 101
T IFV + +VT+ R F +YGEI + +P + +G GF+ FA++
Sbjct: 92 TRIFVARIPQSVTEATFRSHFEKYGEITDLYMPKDQGSKMHRGIGFITFASA 143
>gi|299753873|ref|XP_002911923.1| pumilio/RRM domain-containing protein [Coprinopsis cinerea
okayama7#130]
gi|298410502|gb|EFI28429.1| pumilio/RRM domain-containing protein [Coprinopsis cinerea
okayama7#130]
Length = 1304
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTME 116
++++G LD +VT E L F+ YG I S+++ K CGFV F + I A V + +
Sbjct: 466 SLWIGNLDSSVTSEQLIHIFAPYGAIESLRLLPEKECGFVNFVDQADAIRAKEDVLNRLG 525
Query: 117 GKFMMVMGMLFR 128
G M G R
Sbjct: 526 GNIGMPNGQTVR 537
>gi|440803127|gb|ELR24039.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 384
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANS---LGQIM 106
+GD TTIFVGGL +V + DL + FS++G I ++++ K GF++F I+
Sbjct: 168 DGDYYPTTIFVGGLADDVEERDLERVFSRFGPIDAIRLISNKNFGFIKFRTPDACQASIL 227
Query: 107 AING 110
+NG
Sbjct: 228 GMNG 231
>gi|432906488|ref|XP_004077556.1| PREDICTED: nucleolysin TIAR-like [Oryzias latipes]
Length = 382
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 10/87 (11%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L+P+++ ED+R F+ +G+I+ ++ KG
Sbjct: 80 NWATTPSSQKKDTSNHFHVFVGDLNPDISTEDVRAAFTPFGKISDARVVKDLTTGKSKGY 139
Query: 94 GFVQFANSLGQIMAINGVGHTMEGKFM 120
GFV F N L A N + H M G+++
Sbjct: 140 GFVSFYNKLD---AENAIVH-MAGQWL 162
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV-GH 113
N T++ GG+ +++ +RQ FS +G+I +++ KG F++F++ AI V G
Sbjct: 203 NCTVYCGGIQSELSEHLMRQTFSPFGQIMEIRVFPEKGYSFIRFSSHDSAAHAIVSVNGT 262
Query: 114 TMEG 117
++EG
Sbjct: 263 SIEG 266
>gi|449440159|ref|XP_004137852.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Cucumis sativus]
gi|449521207|ref|XP_004167621.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Cucumis sativus]
Length = 640
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFANSLGQIMAIN 109
+ ++V +D +VTDE+LR+ FSQ+G I S K+ + KG GFV F+N A+N
Sbjct: 296 SNVYVKNIDDDVTDEELRERFSQFGTITSSKLMRDDKGINKGFGFVCFSNPDEAKRAVN 354
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 14/107 (13%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFANSLGQIM 106
D T ++V LDP + +E L++ FS++G+I+S+ I V +G GF+ F NS
Sbjct: 189 DIKYTNLYVKNLDPEIGEEHLQEKFSEFGKISSMIISRDENGVSRGFGFINFENSDDAKR 248
Query: 107 AINGVGHTMEGKFMMVMGM---------LFRHQMTQACTLQQLRPMG 144
A+ + + G ++ + + R + C Q L+ G
Sbjct: 249 ALETLNGSQLGSKVIYIARAQKKTEREEVLRRHYEEKCKEQVLKYKG 295
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI----PVGKGC--GFVQFANS 101
Q +S +++VG L P+VTD L FS + +ASV+I G+ G+V F +
Sbjct: 6 QPTAHASPASLYVGDLHPDVTDGQLFDAFSGFKSLASVRICRDSSTGRSLSYGYVNFISP 65
Query: 102 LGQIMAINGVGHTM-EGKFMMVM 123
AI + H+M G+ + VM
Sbjct: 66 QDATNAIEVMNHSMLNGRAIRVM 88
>gi|413952999|gb|AFW85648.1| pre-mRNA-splicing factor SLT11 [Zea mays]
Length = 493
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 9/69 (13%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF---------ANSL 102
D + T+++GGLD +T++DLR F +GEI S+++ + + FV + A L
Sbjct: 224 DETIRTLYIGGLDSRITEQDLRDQFYAHGEIESIRMVLQRAIAFVTYTTREGAEKAAEEL 283
Query: 103 GQIMAINGV 111
+ I GV
Sbjct: 284 ANKLVIKGV 292
>gi|384491350|gb|EIE82546.1| hypothetical protein RO3G_07251 [Rhizopus delemar RA 99-880]
Length = 348
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 57/125 (45%), Gaps = 28/125 (22%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQ-------SEGDS 53
+ MNG + +RP+R AT Q G + AP G Q + +
Sbjct: 175 IATMNGEWLGTRPIRCNWAT-------------QKGQTAMPAPQPGQQLPYEVVVQQTPA 221
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF------ANSLGQI-- 105
T+I+VG + NV+ DL QPF ++G + VK +G FV+ AN++ +
Sbjct: 222 YVTSIYVGNIPLNVSQNDLVQPFQRFGYVQEVKFQADRGFAFVKMDTHENAANAIVHLQN 281
Query: 106 MAING 110
M+ING
Sbjct: 282 MSING 286
Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 8/60 (13%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVK-IPVGK-------GCGFVQFAN 100
+E + TTI+VG LD VTD L + F+ G++ SVK I V K GFV+FA+
Sbjct: 11 AETTNPATTIYVGNLDQRVTDTMLNEIFTTVGQVVSVKIISVRKHNNFGAVNYGFVEFAD 70
>gi|147856399|emb|CAN82467.1| hypothetical protein VITISV_002664 [Vitis vinifera]
Length = 461
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 54/107 (50%), Gaps = 6/107 (5%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+ SG + S+G + P+++ + T+F + T+ D+ + FS+ G+
Sbjct: 62 RRRSGRDGERESKGRRFKDKKEAVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGK 121
Query: 82 IASVKIPV------GKGCGFVQFANSLGQIMAINGVGHTMEGKFMMV 122
+ V++ + KG G+++F +++ MAI GH + G+ +MV
Sbjct: 122 VRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGHLLHGQPVMV 168
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 6/52 (11%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFAN 100
+ ++VG L N+T+ LRQ F +G + V++P+ KG GFVQFA
Sbjct: 198 DRKLYVGNLHFNMTELQLRQIFEPFGRVELVQLPLDLETGQCKGFGFVQFAE 249
>gi|443692084|gb|ELT93758.1| hypothetical protein CAPTEDRAFT_170758 [Capitella teleta]
Length = 238
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 32/55 (58%)
Query: 37 YASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK 91
+ N P + G IFVGGLDP V ++++RQ FS+YG++ V++P +
Sbjct: 129 HGKNIDPKRAKARPGREPVKKIFVGGLDPEVPEDEIRQHFSKYGKVEEVELPFDR 183
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 6/97 (6%)
Query: 28 QQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI 87
QQ+ QG ++ Q S D + IFVGGL T +D++ FS++GE+ +
Sbjct: 35 QQEMPEQGMESAELGGSQHAGSCEDEESRKIFVGGLSWETTVKDMKDYFSKFGEVTDATL 94
Query: 88 PV------GKGCGFVQFANSLGQIMAINGVGHTMEGK 118
+G GFV F +S I HT+ GK
Sbjct: 95 KTDQNTGRSRGFGFVTFVDSTCVNRVIEQTQHTLHGK 131
>gi|32564504|ref|NP_495123.2| Protein TIAR-1, isoform e [Caenorhabditis elegans]
gi|373219013|emb|CCD65018.1| Protein TIAR-1, isoform e [Caenorhabditis elegans]
Length = 305
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 8/108 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +MNG + R +R AT + G Q++ S Y Q+ GD NT+++V
Sbjct: 90 IEQMNGQWLGRRTIRTNWAT--RKPGDQEKPSH---YNEKSYDEIYNQTSGD--NTSVYV 142
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
G + ++T++++RQ F+ +G I V+I +G FV+F N AI
Sbjct: 143 GNI-ASLTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAI 189
>gi|442621495|ref|NP_001263032.1| CG34362, isoform E [Drosophila melanogaster]
gi|440217978|gb|AGB96412.1| CG34362, isoform E [Drosophila melanogaster]
Length = 509
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 16/119 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQ--SEGDSSNTTI 58
+T MNG + SR +R AT RK ++ N P + ++ SN T+
Sbjct: 224 ITAMNGQWLGSRSIRTNWAT-RKPPASKE----------NIKPLTFDEVYNQSSPSNCTV 272
Query: 59 FVGGLDPNVT---DEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHT 114
+VGG++ +T +E L++ F+ YG I +++ KG FV+F+ AI GV +T
Sbjct: 273 YVGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKDKGYAFVRFSTKEAATHAIVGVHNT 331
>gi|392595910|gb|EIW85233.1| hypothetical protein CONPUDRAFT_79901 [Coniophora puteana
RWD-64-598 SS2]
Length = 1277
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTME 116
++++G LD VT E L F+ YG I S+++ K CGFV F + I A + V + +
Sbjct: 431 SLWIGNLDSAVTSEQLIHVFAPYGAIESLRLLPEKECGFVNFVDQADAIRAKDDVLNRLG 490
Query: 117 GKFMMVMGMLFR 128
G M G R
Sbjct: 491 GNIGMPNGQTVR 502
>gi|302765773|ref|XP_002966307.1| hypothetical protein SELMODRAFT_439636 [Selaginella moellendorffii]
gi|300165727|gb|EFJ32334.1| hypothetical protein SELMODRAFT_439636 [Selaginella moellendorffii]
Length = 289
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 9/73 (12%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFANSLGQIMA 107
S T+++VGGL +VT++ +R F ++GEI VKI +G GF+ FA S A
Sbjct: 4 SDQTSVYVGGLAYDVTEDLIRSTFEEFGEIDKVKIIQDHDGQSRGYGFITFATS----EA 59
Query: 108 INGVGHTMEGKFM 120
NG + M GK +
Sbjct: 60 ANGAIYGMNGKVV 72
>gi|195449393|ref|XP_002072055.1| GK22641 [Drosophila willistoni]
gi|194168140|gb|EDW83041.1| GK22641 [Drosophila willistoni]
Length = 521
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 16/119 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQ--SEGDSSNTTI 58
+T MNG + SR +R AT RK ++ N P + ++ SN T+
Sbjct: 239 ITAMNGQWLGSRSIRTNWAT-RKPPASKE----------NVKPLTFDEVYNQSSPSNCTV 287
Query: 59 FVGGLDPNVT---DEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHT 114
+VGG++ +T +E L++ F+ YG I +++ KG FV+F+ AI GV +T
Sbjct: 288 YVGGVNSALTALSEEILQKTFTPYGAIQEIRVFKDKGYAFVRFSTKEAATHAIVGVHNT 346
>gi|380487237|emb|CCF38170.1| hypothetical protein CH063_09326 [Colletotrichum higginsianum]
Length = 206
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Query: 24 SSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIA 83
+S Y++Q +G Y P + D S +FV +V +DL + FS+YGE+
Sbjct: 71 ASHYERQERGRGAYKK---PFEKRTPRVDPSEHVVFVQNYSFDVKPDDLTEAFSKYGEVV 127
Query: 84 SVKIPVGKGCGFVQFANSLGQIMAINGVGHTM 115
V +P K FV F + + A+ V T
Sbjct: 128 GVSMPPKKTYCFVYFKDLESSVAAVENVNGTF 159
>gi|24650782|ref|NP_651609.1| CG34362, isoform A [Drosophila melanogaster]
gi|21464374|gb|AAM51990.1| RE10833p [Drosophila melanogaster]
gi|23172487|gb|AAF56774.2| CG34362, isoform A [Drosophila melanogaster]
gi|220947934|gb|ACL86510.1| CG34362-PA [synthetic construct]
gi|220957166|gb|ACL91126.1| CG34362-PA [synthetic construct]
Length = 505
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 16/119 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQ--SEGDSSNTTI 58
+T MNG + SR +R AT RK ++ N P + ++ SN T+
Sbjct: 224 ITAMNGQWLGSRSIRTNWAT-RKPPASKE----------NIKPLTFDEVYNQSSPSNCTV 272
Query: 59 FVGGLDPNVT---DEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHT 114
+VGG++ +T +E L++ F+ YG I +++ KG FV+F+ AI GV +T
Sbjct: 273 YVGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKDKGYAFVRFSTKEAATHAIVGVHNT 331
>gi|17554534|ref|NP_497856.1| Protein SUP-26, isoform a [Caenorhabditis elegans]
gi|3879058|emb|CAA90772.1| Protein SUP-26, isoform a [Caenorhabditis elegans]
Length = 357
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 31 YSSQGGYASNGAPGQGPQSEGDS---SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI 87
+ + GY AP +G Q DS S+T +++ GL PN D+ LR+ S+YG IAS K
Sbjct: 54 FGNSNGYGRYTAP-RGDQQHHDSTPLSSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKA 112
Query: 88 PVG------KGCGFVQFANSLGQIMAINGV 111
+ KG GFV F + A++G+
Sbjct: 113 IMDKATNNCKGYGFVDFESPQAAAAAVDGL 142
>gi|7446337|pir||T15542 hypothetical protein C18A3.5 - Caenorhabditis elegans
Length = 448
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 8/108 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +MNG + R +R AT + G Q++ S Y Q+ GD NT+++V
Sbjct: 233 IEQMNGQWLGRRTIRTNWAT--RKPGDQEKPSH---YNEKSYDEIYNQTSGD--NTSVYV 285
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
G + ++T++++RQ F+ +G I V+I +G FV+F N AI
Sbjct: 286 GNI-ASLTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAI 332
>gi|195500854|ref|XP_002097552.1| GE24427 [Drosophila yakuba]
gi|194183653|gb|EDW97264.1| GE24427 [Drosophila yakuba]
Length = 430
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PV---GKGCGFVQFANS 101
+ +GD IF+GGL T + LR+ FSQ+G +A + PV +G GFV + +
Sbjct: 24 KDDGDEHLRKIFIGGLSTQTTMDTLREFFSQFGSVADAVVMRDPVNNHSRGFGFVTYVDP 83
Query: 102 LGQIMAINGVGHTMEGKFMMVMGMLFRHQMTQA 134
+ HT++ K + L RH+ +A
Sbjct: 84 KSIEIVQKARPHTIDNKAVETKPALPRHEFNRA 116
>gi|50548795|ref|XP_501867.1| YALI0C15400p [Yarrowia lipolytica]
gi|49647734|emb|CAG82180.1| YALI0C15400p [Yarrowia lipolytica CLIB122]
Length = 784
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 30/59 (50%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTME 116
+++G +D N + LR FS++G+I + K C FV F N I AI G+ E
Sbjct: 426 VYIGDIDDNWPESKLRADFSEFGDIEQINFLKEKSCAFVNFTNLANAIKAIEGIKQKSE 484
>gi|241710461|ref|XP_002403460.1| RNA-binding protein, putative [Ixodes scapularis]
gi|215505106|gb|EEC14600.1| RNA-binding protein, putative [Ixodes scapularis]
Length = 566
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV 111
D S TT++VG L +T++DLR F QYGEI + + C FVQF + +A +
Sbjct: 228 DGSITTLYVGNLGERLTEKDLRDHFYQYGEIRQITMLARHQCAFVQFTSRTSAELAADKT 287
Query: 112 GHT--MEGKFMMVM--GMLFRHQMTQACTLQQLRPM 143
+ + G+ +++ L R + A T Q RP+
Sbjct: 288 FNKLILAGRRLVIKWGRALARSEPAIAPTPSQSRPL 323
>gi|71027799|ref|XP_763543.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350496|gb|EAN31260.1| nucleic acid binding factor, putative [Theileria parva]
Length = 421
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 56/115 (48%), Gaps = 12/115 (10%)
Query: 15 RIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQ 74
R + TPR S + YS SNG+ ++ D S +FVG + + LR
Sbjct: 302 RTFSDTPRTYSDAPKTYSDGSRTYSNGS-----RNGRDRSIPKLFVGRIAFETSVHSLRT 356
Query: 75 PFSQYGEIASVKIP------VGKGCGFVQFANSLGQIMAIN-GVGHTMEGKFMMV 122
FSQ+GE+ V IP GKG GF+ FAN A++ + H ++G+ ++V
Sbjct: 357 YFSQFGEVIDVYIPKDPHTQKGKGFGFITFANKNSIHSALDPSLKHVVDGREIIV 411
>gi|226480630|emb|CAX73412.1| TIA1 cytotoxic granule-associated RNA binding protein [Schistosoma
japonicum]
Length = 651
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVG 112
++NTTI+VGG+ +T++ L+ F Q+GEI ++I KG FV+F + + AI
Sbjct: 259 AANTTIYVGGITNELTEKLLQDSFKQFGEIKEIRIFKDKGFSFVRFDSHVAATQAIV--- 315
Query: 113 HTMEGKFM 120
TM GK +
Sbjct: 316 -TMHGKIV 322
Score = 38.1 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 33/86 (38%), Positives = 37/86 (43%), Gaps = 12/86 (13%)
Query: 24 SSGYQQQYSSQG----GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQY 79
S Q Q+SS G N SE DS + IFVG L P V DE L FS +
Sbjct: 123 SESDQSQHSSNSKINHGTTDNVTSTTRSLSEDDSFH--IFVGDLAPEVQDETLLAAFSNF 180
Query: 80 GEIASVKI------PVGKGCGFVQFA 99
G I KI KG GFV +A
Sbjct: 181 GTITECKIIKDMHTQKPKGYGFVAYA 206
>gi|170055835|ref|XP_001863758.1| nucleolysin tia-1 [Culex quinquefasciatus]
gi|167875726|gb|EDS39109.1| nucleolysin tia-1 [Culex quinquefasciatus]
Length = 456
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 32/123 (26%)
Query: 4 MNGVYCSSRPMRIGAAT-----PR---------KSSGYQQQYSSQGGYASNGAPGQGPQS 49
MNG + SR +R +T PR K+ G+++ Y++ G
Sbjct: 157 MNGQWLGSRSIRTNWSTRKPPAPRENTKGIKSGKTPGFEEIYNNTG-------------- 202
Query: 50 EGDSSNTTIFVGGLDPN-VTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
+NTT++ GG PN ++D ++ F Q+G I V++ KG F++F + AI
Sbjct: 203 ---PTNTTVYCGGFPPNTISDNLIKTHFGQFGSIHDVRVFKDKGYAFIKFISKEAAARAI 259
Query: 109 NGV 111
G
Sbjct: 260 EGT 262
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 10/78 (12%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 95
+PG P+++ S + IFVG L P + E LR+ F+ +GEI++ +I KG F
Sbjct: 83 SPGNQPKTD-TSQHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTLKSKGYAF 141
Query: 96 VQF---ANSLGQIMAING 110
V F A + I +NG
Sbjct: 142 VSFVKKAEAENAIQMMNG 159
>gi|333381249|ref|ZP_08472931.1| hypothetical protein HMPREF9455_01097 [Dysgonomonas gadei ATCC
BAA-286]
gi|332830219|gb|EGK02847.1| hypothetical protein HMPREF9455_01097 [Dysgonomonas gadei ATCC
BAA-286]
Length = 107
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 9/65 (13%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFA-NSLGQ--IMAI 108
IF+ GL ++ D DL+ FS+YGEI S K+ + KG GFV+ A N+ GQ I +
Sbjct: 3 IFIAGLSYSINDNDLKDLFSEYGEITSAKVIMDKATGRSKGYGFVELADNAAGQKAIEEL 62
Query: 109 NGVGH 113
NG +
Sbjct: 63 NGAEY 67
>gi|147902038|ref|NP_001087561.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
laevis]
gi|51261513|gb|AAH80105.1| MGC84540 protein [Xenopus laevis]
Length = 389
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 6/121 (4%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M G + R +R AT RK + Y S + + ++ SN T++
Sbjct: 164 IAQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESNAKQLTY----EEVVNQSSPSNCTVYC 218
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV-GHTMEGKF 119
GG+ +T++ +RQ FS +G+I V++ KG FV+F++ AI V G T+EG
Sbjct: 219 GGVTSGLTEQLMRQTFSPFGQIMEVRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHV 278
Query: 120 M 120
+
Sbjct: 279 V 279
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANSLGQIMAINGV 111
+FVG L P +T +D++ F+ +G I+ ++ KG GFV F N AI +
Sbjct: 108 VFVGDLSPEITTDDIKAAFAPFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQM 167
Query: 112 G 112
G
Sbjct: 168 G 168
>gi|198451107|ref|XP_002137227.1| GA26680 [Drosophila pseudoobscura pseudoobscura]
gi|198131338|gb|EDY67785.1| GA26680 [Drosophila pseudoobscura pseudoobscura]
Length = 503
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 16/119 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQ--SEGDSSNTTI 58
+T MNG + SR +R AT RK ++ N P + ++ SN T+
Sbjct: 230 ITAMNGQWLGSRSIRTNWAT-RKPPASKE----------NIKPLTFDEVYNQSSPSNCTV 278
Query: 59 FVGGLDPNVT---DEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHT 114
+VGG++ +T +E L++ F+ YG I +++ KG FV+F+ AI GV +T
Sbjct: 279 YVGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKDKGYAFVRFSTKEAATHAIVGVHNT 337
>gi|195143945|ref|XP_002012957.1| GL23648 [Drosophila persimilis]
gi|194101900|gb|EDW23943.1| GL23648 [Drosophila persimilis]
Length = 503
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 16/119 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQ--SEGDSSNTTI 58
+T MNG + SR +R AT RK ++ N P + ++ SN T+
Sbjct: 230 ITAMNGQWLGSRSIRTNWAT-RKPPASKE----------NIKPLTFDEVYNQSSPSNCTV 278
Query: 59 FVGGLDPNVT---DEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHT 114
+VGG++ +T +E L++ F+ YG I +++ KG FV+F+ AI GV +T
Sbjct: 279 YVGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKDKGYAFVRFSTKEAATHAIVGVHNT 337
>gi|442621497|ref|NP_001263033.1| CG34362, isoform F [Drosophila melanogaster]
gi|440217979|gb|AGB96413.1| CG34362, isoform F [Drosophila melanogaster]
Length = 498
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 16/119 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQ--SEGDSSNTTI 58
+T MNG + SR +R AT RK ++ N P + ++ SN T+
Sbjct: 224 ITAMNGQWLGSRSIRTNWAT-RKPPASKE----------NIKPLTFDEVYNQSSPSNCTV 272
Query: 59 FVGGLDPNVT---DEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHT 114
+VGG++ +T +E L++ F+ YG I +++ KG FV+F+ AI GV +T
Sbjct: 273 YVGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKDKGYAFVRFSTKEAATHAIVGVHNT 331
>gi|8778484|gb|AAF79492.1|AC022492_36 F1L3.2 [Arabidopsis thaliana]
Length = 575
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 14/117 (11%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ-------GGYASNGAP---GQGPQSEGDS 53
+G + SR +R AT +SG +Q S G + +G G+ P E ++
Sbjct: 325 FSGKWLGSRQIRCNWATKGATSGEDKQSSDSKSVVELTSGVSEDGKDTTNGEAP--ENNA 382
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGE--IASVKIPVGKGCGFVQFANSLGQIMAI 108
TT++VG L P V+ DL + F G I V++ KG GFV+++ + +AI
Sbjct: 383 QYTTVYVGNLAPEVSQVDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHVEAALAI 439
>gi|195574475|ref|XP_002105214.1| GD21364 [Drosophila simulans]
gi|194201141|gb|EDX14717.1| GD21364 [Drosophila simulans]
Length = 496
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 16/119 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQ--SEGDSSNTTI 58
+T MNG + SR +R AT RK ++ N P + ++ SN T+
Sbjct: 222 ITAMNGQWLGSRSIRTNWAT-RKPPASKE----------NIKPLTFDEVYNQSSPSNCTV 270
Query: 59 FVGGLDPNVT---DEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHT 114
+VGG++ +T +E L++ F+ YG I +++ KG FV+F+ AI GV +T
Sbjct: 271 YVGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKDKGYAFVRFSTKEAATHAIVGVHNT 329
>gi|194907035|ref|XP_001981474.1| GG11588 [Drosophila erecta]
gi|190656112|gb|EDV53344.1| GG11588 [Drosophila erecta]
Length = 502
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 16/119 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQ--SEGDSSNTTI 58
+T MNG + SR +R AT RK ++ N P + ++ SN T+
Sbjct: 228 ITAMNGQWLGSRSIRTNWAT-RKPPASKE----------NIKPLTFDEVYNQSSPSNCTV 276
Query: 59 FVGGLDPNVT---DEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHT 114
+VGG++ +T +E L++ F+ YG I +++ KG FV+F+ AI GV +T
Sbjct: 277 YVGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKDKGYAFVRFSTKEAATHAIVGVHNT 335
>gi|17531965|ref|NP_495121.1| Protein TIAR-1, isoform a [Caenorhabditis elegans]
gi|373219010|emb|CCD65015.1| Protein TIAR-1, isoform a [Caenorhabditis elegans]
Length = 408
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 8/108 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +MNG + R +R AT + G Q++ S Y Q+ GD NT+++V
Sbjct: 193 IEQMNGQWLGRRTIRTNWAT--RKPGDQEKPSH---YNEKSYDEIYNQTSGD--NTSVYV 245
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
G + ++T++++RQ F+ +G I V+I +G FV+F N AI
Sbjct: 246 GNI-ASLTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAI 292
>gi|392894644|ref|NP_001254898.1| Protein SUP-26, isoform r [Caenorhabditis elegans]
gi|293324786|emb|CBK55602.1| Protein SUP-26, isoform r [Caenorhabditis elegans]
Length = 424
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 31 YSSQGGYASNGAPGQGPQSEGDS---SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI 87
+ + GY AP +G Q DS S+T +++ GL PN D+ LR+ S+YG IAS K
Sbjct: 121 FGNSNGYGRYTAP-RGDQQHHDSTPLSSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKA 179
Query: 88 PVG------KGCGFVQFANSLGQIMAINGV 111
+ KG GFV F + A++G+
Sbjct: 180 IMDKATNNCKGYGFVDFESPQAAAAAVDGL 209
>gi|392894649|ref|NP_001254900.1| Protein SUP-26, isoform f [Caenorhabditis elegans]
gi|293324773|emb|CBK55589.1| Protein SUP-26, isoform f [Caenorhabditis elegans]
Length = 354
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 31 YSSQGGYASNGAPGQGPQSEGDS---SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI 87
+ + GY AP +G Q DS S+T +++ GL PN D+ LR+ S+YG IAS K
Sbjct: 54 FGNSNGYGRYTAP-RGDQQHHDSTPLSSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKA 112
Query: 88 PVG------KGCGFVQFANSLGQIMAINGV 111
+ KG GFV F + A++G+
Sbjct: 113 IMDKATNNCKGYGFVDFESPQAAAAAVDGL 142
>gi|226509868|ref|NP_001151426.1| LOC100285059 [Zea mays]
gi|195646758|gb|ACG42847.1| pre-mRNA-splicing factor SLT11 [Zea mays]
Length = 490
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 9/69 (13%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF---------ANSL 102
D + T+++GGLD +T++DLR F +GEI S+++ + + FV + A L
Sbjct: 224 DETIRTLYIGGLDSRITEQDLRDQFYAHGEIESIRMVLQRAIAFVTYTTREGAEKAAEEL 283
Query: 103 GQIMAINGV 111
+ I GV
Sbjct: 284 ANKLVIKGV 292
>gi|12836308|dbj|BAB23598.1| unnamed protein product [Mus musculus]
Length = 257
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 29 QQYSSQG-GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI 87
QQ SSQ G + + P + + + +FVG L P++T+E++R+ F +YG+ V I
Sbjct: 48 QQASSQNEGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFI 107
Query: 88 PVGKGCGFVQF-ANSLGQIMAINGVGHTMEGKFMMV 122
KG GF++ +L +I + + GK + V
Sbjct: 108 HKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRV 143
>gi|29654256|ref|NP_819948.1| RNA binding protein [Coxiella burnetii RSA 493]
gi|153207639|ref|ZP_01946303.1| glycine rich RNA binding protein [Coxiella burnetii 'MSU Goat
Q177']
gi|154706606|ref|YP_001424503.1| RNA binding protein [Coxiella burnetii Dugway 5J108-111]
gi|165918878|ref|ZP_02218964.1| glycine rich RNA binding protein [Coxiella burnetii Q321]
gi|212212620|ref|YP_002303556.1| RNA binding protein [Coxiella burnetii CbuG_Q212]
gi|212218487|ref|YP_002305274.1| RNA binding protein [Coxiella burnetii CbuK_Q154]
gi|29541522|gb|AAO90462.1| RNA binding protein [Coxiella burnetii RSA 493]
gi|120576458|gb|EAX33082.1| glycine rich RNA binding protein [Coxiella burnetii 'MSU Goat
Q177']
gi|154355892|gb|ABS77354.1| RNA binding protein [Coxiella burnetii Dugway 5J108-111]
gi|165917426|gb|EDR36030.1| glycine rich RNA binding protein [Coxiella burnetii Q321]
gi|212011030|gb|ACJ18411.1| RNA binding protein [Coxiella burnetii CbuG_Q212]
gi|212012749|gb|ACJ20129.1| RNA binding protein [Coxiella burnetii CbuK_Q154]
Length = 129
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 11/90 (12%)
Query: 44 GQGPQSEGDSS-----NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKG 92
G+G DSS N I+VG L +V + DL Q FS++G I SVKI KG
Sbjct: 27 GRGKDRLDDSSWKSDNNDQIYVGNLPYHVVENDLHQYFSRFGAIESVKIVRNFRTGRSKG 86
Query: 93 CGFVQFANSLGQIMAINGVGHTMEGKFMMV 122
FV + + A++ G ++G+ ++V
Sbjct: 87 YAFVTYVTPKQAVKALDAHGKDLQGRSLVV 116
>gi|223974935|gb|ACN31655.1| unknown [Zea mays]
gi|413952998|gb|AFW85647.1| hypothetical protein ZEAMMB73_699245 [Zea mays]
Length = 441
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 9/69 (13%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF---------ANSL 102
D + T+++GGLD +T++DLR F +GEI S+++ + + FV + A L
Sbjct: 224 DETIRTLYIGGLDSRITEQDLRDQFYAHGEIESIRMVLQRAIAFVTYTTREGAEKAAEEL 283
Query: 103 GQIMAINGV 111
+ I GV
Sbjct: 284 ANKLVIKGV 292
>gi|224077836|ref|XP_002305429.1| predicted protein [Populus trichocarpa]
gi|118481826|gb|ABK92850.1| unknown [Populus trichocarpa]
gi|222848393|gb|EEE85940.1| predicted protein [Populus trichocarpa]
Length = 165
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 59 FVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANSLGQIMAINGV- 111
FVGGL TD+ L++ FSQYGEI KI +G GFV F N AI+G+
Sbjct: 10 FVGGLAWATTDQSLQEAFSQYGEIIDSKIINDRETGRSRGFGFVTFNNEKAMRDAIDGMN 69
Query: 112 GHTMEGKFMMV 122
G ++G+ + V
Sbjct: 70 GQDLDGRNITV 80
>gi|301110582|ref|XP_002904371.1| U2-associated splicing factor, putative [Phytophthora infestans
T30-4]
gi|262096497|gb|EEY54549.1| U2-associated splicing factor, putative [Phytophthora infestans
T30-4]
Length = 907
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 9/64 (14%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCG 94
+G GD T ++VG L P VT+E L+ F +YGE+ SVKI + CG
Sbjct: 168 AKGSFDNGDPETTNLYVGNLAPTVTEEVLQAEFGRYGEVYSVKIMWPRSEEERARKRNCG 227
Query: 95 FVQF 98
FV F
Sbjct: 228 FVSF 231
>gi|1546894|emb|CAA69250.1| ssRNA-binding protein [Dictyostelium discoideum]
Length = 291
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 9/77 (11%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGK--GCGFVQFANSLG 103
+E D ++ IFVG L +VT+E LRQ F +Y K+ VGK G GFV F++S
Sbjct: 193 AEWDPNDFRIFVGDLGNDVTEEMLRQAFLKYPTFLKAKVIFDKVGKSRGFGFVSFSDSSD 252
Query: 104 QIMAINGVGHTMEGKFM 120
I A N TM GK++
Sbjct: 253 YISAFN----TMNGKYI 265
>gi|345108301|emb|CBZ41969.1| deleted in azoospermia (Daz)-associated protein 1 [Botryllus
schlosseri]
Length = 333
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANSL 102
SEGD IFVGGL TD+ LRQ FS YGEI + + +G GFV++A++
Sbjct: 2 SEGDEVGK-IFVGGLTRETTDDMLRQHFSNYGEIVECIVMRDKLTQMSRGFGFVKYADAG 60
Query: 103 GQIMAINGVGHTMEGK 118
+ HT++ K
Sbjct: 61 AVAEVLKNRPHTLDNK 76
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANSLGQIMAINGV 111
IF+GGL N T+E+++ FSQYG + V + KG GFV F + A+
Sbjct: 105 IFIGGLAQNATEEEVKAYFSQYGSVTEVVFVINKEENRHKGFGFVTFESESAVDQAVGKH 164
Query: 112 GHTMEGK 118
H + GK
Sbjct: 165 FHEICGK 171
>gi|392894632|ref|NP_001254892.1| Protein SUP-26, isoform q [Caenorhabditis elegans]
gi|293324785|emb|CBK55601.1| Protein SUP-26, isoform q [Caenorhabditis elegans]
Length = 476
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 31 YSSQGGYASNGAPGQGPQSEGDS---SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI 87
+ + GY AP +G Q DS S+T +++ GL PN D+ LR+ S+YG IAS K
Sbjct: 121 FGNSNGYGRYTAP-RGDQQHHDSTPLSSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKA 179
Query: 88 PVG------KGCGFVQFANSLGQIMAINGV 111
+ KG GFV F + A++G+
Sbjct: 180 IMDKATNNCKGYGFVDFESPQAAAAAVDGL 209
>gi|281340177|gb|EFB15761.1| hypothetical protein PANDA_019197 [Ailuropoda melanoleuca]
Length = 420
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF-ANSLGQIMAINGV 111
+ + +FVG L P++T+E++R+ F +YG+ V I KG GF++ +L +I +
Sbjct: 20 TQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEIAKVELD 79
Query: 112 GHTMEGKFMMV 122
+ GK + V
Sbjct: 80 NMPLRGKQLRV 90
>gi|354497987|ref|XP_003511098.1| PREDICTED: non-POU domain-containing octamer-binding protein
[Cricetulus griseus]
Length = 426
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF-ANSLGQIMAINGV 111
+ + +FVG L P++T+E++R+ F +YG+ V I KG GF++ +L +I +
Sbjct: 26 TQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEIAKVELD 85
Query: 112 GHTMEGKFMMV 122
+ GK + V
Sbjct: 86 NMPLRGKQLRV 96
>gi|195503598|ref|XP_002098718.1| GE23777 [Drosophila yakuba]
gi|194184819|gb|EDW98430.1| GE23777 [Drosophila yakuba]
Length = 543
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 16/119 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQ--SEGDSSNTTI 58
+T MNG + SR +R AT RK ++ N P + ++ SN T+
Sbjct: 269 ITAMNGQWLGSRSIRTNWAT-RKPPASKE----------NIKPLTFDEVYNQSSPSNCTV 317
Query: 59 FVGGLDPNVT---DEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHT 114
+VGG++ +T +E L++ F+ YG I +++ KG FV+F+ AI GV +T
Sbjct: 318 YVGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKDKGYAFVRFSTKEAATHAIVGVHNT 376
>gi|225441084|ref|XP_002264613.1| PREDICTED: probable polyadenylate-binding protein At2g36660 [Vitis
vinifera]
gi|297740018|emb|CBI30200.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 8/68 (11%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQF---ANSLG 103
D+ T +++ LDP+VT+E LR+ F ++G+IAS+ I + +G GFV F ++
Sbjct: 187 DAKYTNLYIKNLDPDVTEEALREKFFEFGKIASLVISKDENGMSRGFGFVNFESPEDAKR 246
Query: 104 QIMAINGV 111
+ A+NG+
Sbjct: 247 ALEALNGL 254
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI----PVGKGC--GFVQFANSLGQIMAIN 109
+++VG L P++TD L FS++ +ASV+I G+ G+V F + AI
Sbjct: 12 ASLYVGDLHPDITDGLLFDAFSEFKSLASVRICRDSSSGRSLCYGYVNFISPQDASHAIE 71
Query: 110 GVGHTM-EGKFMMVM 123
HTM GK + VM
Sbjct: 72 AKNHTMLHGKVIRVM 86
>gi|195123969|ref|XP_002006474.1| GI21069 [Drosophila mojavensis]
gi|193911542|gb|EDW10409.1| GI21069 [Drosophila mojavensis]
Length = 936
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 13/85 (15%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD + T +++G L+P ++++ L + F +YG +AS+KI G+ CGFV
Sbjct: 184 GSFDTGDPNTTNLYLGNLNPKISEQQLMEIFGRYGPLASIKIMWPRSEEEKQRGRNCGFV 243
Query: 97 QFANSLGQIMAINGVGHTMEGKFMM 121
+ + A+ T+ G+++M
Sbjct: 244 AYMSRKDAERAL----RTLNGRYIM 264
>gi|195353012|ref|XP_002043004.1| GM16370 [Drosophila sechellia]
gi|194127069|gb|EDW49112.1| GM16370 [Drosophila sechellia]
Length = 504
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 16/119 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQ--SEGDSSNTTI 58
+T MNG + SR +R AT RK ++ N P + ++ SN T+
Sbjct: 223 ITAMNGQWLGSRSIRTNWAT-RKPPANKE----------NIKPLTFDEVYNQSSPSNCTV 271
Query: 59 FVGGLDPNVT---DEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHT 114
+VGG++ +T +E L++ F+ YG I +++ KG FV+F+ AI GV +T
Sbjct: 272 YVGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKDKGYAFVRFSTKEAATHAIVGVHNT 330
>gi|431914405|gb|ELK15662.1| Non-POU domain-containing octamer-binding protein [Pteropus alecto]
Length = 299
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 29 QQYSSQG-GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI 87
QQ SSQ G + + P + + + +FVG L P++T+E++R+ F +YG+ V I
Sbjct: 76 QQASSQNEGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFI 135
Query: 88 PVGKGCGFVQF-ANSLGQIMAINGVGHTMEGKFMMV 122
KG GF++ +L +I + + GK + V
Sbjct: 136 HKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRV 171
>gi|392894638|ref|NP_001254895.1| Protein SUP-26, isoform n [Caenorhabditis elegans]
gi|293324779|emb|CBK55595.1| Protein SUP-26, isoform n [Caenorhabditis elegans]
Length = 412
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 31 YSSQGGYASNGAPGQGPQSEGDS---SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI 87
+ + GY AP +G Q DS S+T +++ GL PN D+ LR+ S+YG IAS K
Sbjct: 54 FGNSNGYGRYTAP-RGDQQHHDSTPLSSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKA 112
Query: 88 PVG------KGCGFVQFANSLGQIMAINGV 111
+ KG GFV F + A++G+
Sbjct: 113 IMDKATNNCKGYGFVDFESPQAAAAAVDGL 142
>gi|195486673|ref|XP_002091605.1| GE12157 [Drosophila yakuba]
gi|194177706|gb|EDW91317.1| GE12157 [Drosophila yakuba]
Length = 960
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 13/85 (15%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD + T +++G L+P ++++ L + F +YG +AS+KI G+ CGFV
Sbjct: 205 GSFDTGDPNTTNLYLGNLNPKISEQQLMEIFGRYGPLASIKIMWPRSEEEKQRGRNCGFV 264
Query: 97 QFANSLGQIMAINGVGHTMEGKFMM 121
+ + A+ T+ G+++M
Sbjct: 265 AYMSRKDAERAL----RTLNGRYIM 285
>gi|17531963|ref|NP_495120.1| Protein TIAR-1, isoform b [Caenorhabditis elegans]
gi|373219011|emb|CCD65016.1| Protein TIAR-1, isoform b [Caenorhabditis elegans]
Length = 376
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 8/108 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +MNG + R +R AT + G Q++ S Y Q+ GD NT+++V
Sbjct: 161 IEQMNGQWLGRRTIRTNWAT--RKPGDQEKPSH---YNEKSYDEIYNQTSGD--NTSVYV 213
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
G + ++T++++RQ F+ +G I V+I +G FV+F N AI
Sbjct: 214 GNI-ASLTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAI 260
>gi|356496896|ref|XP_003517301.1| PREDICTED: DAZ-associated protein 1-like [Glycine max]
Length = 362
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 42/89 (47%), Gaps = 14/89 (15%)
Query: 27 YQQQYSSQGGYASNGAPG----QGP-QSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQ 78
Y S+ YA+ GAP GP GD S T IFVG L P T +DLRQ F +
Sbjct: 192 YNAYISAATRYAALGAPTLYDQPGPIYGRGDPSRRTSKKIFVGRLPPEATSDDLRQYFGR 251
Query: 79 YGEIASVKIPVG------KGCGFVQFANS 101
+G I V +P +G GFV FA
Sbjct: 252 FGRILDVYVPRDPKRTGHRGFGFVTFAED 280
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 6/52 (11%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANS 101
T IFV + +VT+ R F +YGEI + +P + +G GF+ FA++
Sbjct: 92 TRIFVARIPQSVTEATFRSHFEKYGEITDLYMPKDQGSKMHRGIGFITFASA 143
>gi|194746386|ref|XP_001955661.1| GF18875 [Drosophila ananassae]
gi|190628698|gb|EDV44222.1| GF18875 [Drosophila ananassae]
Length = 495
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 16/119 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQ--SEGDSSNTTI 58
+T MNG + SR +R AT RK ++ N P + ++ SN T+
Sbjct: 222 ITAMNGQWLGSRSIRTNWAT-RKPPASKE----------NIKPLTFDEVYNQSSPSNCTV 270
Query: 59 FVGGLDPNVT---DEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHT 114
+VGG++ +T +E L++ F+ YG I +++ KG FV+F+ AI GV +T
Sbjct: 271 YVGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKDKGYAFVRFSTKEAATHAIVGVHNT 329
>gi|401886800|gb|EJT50818.1| hypothetical protein A1Q1_08031 [Trichosporon asahii var. asahii
CBS 2479]
Length = 310
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 37/60 (61%), Gaps = 6/60 (10%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANSLGQIMAINGV 111
I+VGGL P++++ D+ FSQ+GEIA + +P K G GFV + + ++A++ +
Sbjct: 13 IYVGGLHPDLSEGDVITIFSQWGEIADINMPRDKETGASRGFGFVMYMDQRSTVLAVDNM 72
>gi|157131270|ref|XP_001655847.1| gar2, putative [Aedes aegypti]
gi|108871595|gb|EAT35820.1| AAEL012045-PA, partial [Aedes aegypti]
Length = 954
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD + T +++G L+P +++++L + F +YG +AS+KI G+ CGFV
Sbjct: 185 GSFDNGDPNTTNLYLGNLNPKISEQELMELFGKYGPLASIKIMWPRSEEERARGRNCGFV 244
Query: 97 QFANSLGQIMAINGVGHTMEGKFMMVMG 124
+ + A+ + ++M +G
Sbjct: 245 AYMSRRDAERALRALNGKEVMNYLMKLG 272
>gi|125777509|ref|XP_001359630.1| GA13140 [Drosophila pseudoobscura pseudoobscura]
gi|195156856|ref|XP_002019312.1| GL12337 [Drosophila persimilis]
gi|54639378|gb|EAL28780.1| GA13140 [Drosophila pseudoobscura pseudoobscura]
gi|194115903|gb|EDW37946.1| GL12337 [Drosophila persimilis]
Length = 422
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF 98
D + TT++VG L +T+ +LR F QYGEI S+ + + C FVQ+
Sbjct: 228 DRNITTLYVGNLPEEITEPELRDQFYQYGEIRSIALVPRQQCAFVQY 274
>gi|425767749|gb|EKV06311.1| hypothetical protein PDIP_80220 [Penicillium digitatum Pd1]
gi|425769522|gb|EKV08014.1| hypothetical protein PDIG_70900 [Penicillium digitatum PHI26]
Length = 353
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 10/90 (11%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANSLG 103
E D ++ +FVG L VTDE L + FS+Y + ++ K G GFV F+ S
Sbjct: 215 EWDPAHFRLFVGNLAGEVTDESLLKAFSRYTSVQKARVVREKRTQKSQGYGFVSFSGSDD 274
Query: 104 QIMAINGVGHTMEGKFMMVMGMLFRHQMTQ 133
A G M+GK++ +L R MT+
Sbjct: 275 YFKA----GREMQGKYIGSHPILLRRAMTE 300
>gi|410914854|ref|XP_003970902.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Takifugu rubripes]
Length = 307
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANSLGQIMAINGV 111
IFVGGL P T+E++R+ F +YGEI ++++P+ +G F+ + +
Sbjct: 142 IFVGGLIPEATEENIREYFGEYGEIENIELPLDPKSNKRRGFIFITYKEEASAKKCLENK 201
Query: 112 GHTMEG 117
HT+EG
Sbjct: 202 FHTIEG 207
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANSL 102
++GD +FVGGL + + +DL+ F+++GE++ I +G GFV F +
Sbjct: 49 TKGDEDTGKMFVGGLSWDTSKKDLKDYFTKFGEVSDCTIKFDSDSGRSRGFGFVLFKDPS 108
Query: 103 GQIMAINGVGHTMEGKFM 120
+ H ++G+ +
Sbjct: 109 SVEKVLEQKEHRLDGRLI 126
>gi|242066226|ref|XP_002454402.1| hypothetical protein SORBIDRAFT_04g030200 [Sorghum bicolor]
gi|241934233|gb|EES07378.1| hypothetical protein SORBIDRAFT_04g030200 [Sorghum bicolor]
Length = 491
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 9/69 (13%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF---------ANSL 102
D + T+++GGLD +T++DLR F +GEI S+++ + + FV + A L
Sbjct: 224 DETIRTLYIGGLDNRITEQDLRDQFYAHGEIESIRMVLQRAIAFVTYTTREGAEKAAEEL 283
Query: 103 GQIMAINGV 111
+ I GV
Sbjct: 284 ANKLVIKGV 292
>gi|195055815|ref|XP_001994808.1| GH17439 [Drosophila grimshawi]
gi|193892571|gb|EDV91437.1| GH17439 [Drosophila grimshawi]
Length = 520
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 16/119 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQ--SEGDSSNTTI 58
+T MNG + SR +R AT RK ++ N P + ++ SN T+
Sbjct: 236 ITAMNGQWLGSRSIRTNWAT-RKPPASKE----------NIKPLTFDEVYNQSSPSNCTV 284
Query: 59 FVGGLDPNVT---DEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHT 114
+VGG++ +T +E L++ F+ YG I +++ KG FV+F+ AI GV +T
Sbjct: 285 YVGGVNSALTALSEEILQKTFALYGAIQEIRVFKDKGYAFVRFSTKEAATHAIVGVHNT 343
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 9/62 (14%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQF---ANSLGQIMAI 108
IFVG L + + LR+ F+ +GEI+ ++ KG GFV F + + I A+
Sbjct: 180 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 239
Query: 109 NG 110
NG
Sbjct: 240 NG 241
>gi|326918801|ref|XP_003205675.1| PREDICTED: non-POU domain-containing octamer-binding protein-like
[Meleagris gallopavo]
Length = 516
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF-ANSLGQIMAINGV 111
+ + +FVG L P++T+E++R+ F +YG+ V I KG GF++ +L +I +
Sbjct: 114 TQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEIAKVELD 173
Query: 112 GHTMEGKFMMV 122
+ GK + V
Sbjct: 174 NMPLRGKQLRV 184
>gi|27819958|gb|AAL39666.2| LD23810p, partial [Drosophila melanogaster]
Length = 958
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 13/80 (16%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFVQFANS 101
GD + T +++G L+P ++++ L + F +YG +AS+KI G+ CGFV + +
Sbjct: 211 GDPNTTNLYLGNLNPKISEQQLMEIFGRYGPLASIKIMWPRSEEEKQRGRNCGFVAYMSR 270
Query: 102 LGQIMAINGVGHTMEGKFMM 121
A+ T+ G+++M
Sbjct: 271 KDAERALK----TLNGRYIM 286
>gi|19922658|ref|NP_611535.1| CG9346 [Drosophila melanogaster]
gi|7291222|gb|AAF46654.1| CG9346 [Drosophila melanogaster]
gi|220947134|gb|ACL86110.1| CG9346-PA [synthetic construct]
gi|220956694|gb|ACL90890.1| CG9346-PA [synthetic construct]
Length = 957
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 13/80 (16%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFVQFANS 101
GD + T +++G L+P ++++ L + F +YG +AS+KI G+ CGFV + +
Sbjct: 210 GDPNTTNLYLGNLNPKISEQQLMEIFGRYGPLASIKIMWPRSEEEKQRGRNCGFVAYMSR 269
Query: 102 LGQIMAINGVGHTMEGKFMM 121
A+ T+ G+++M
Sbjct: 270 KDAERALK----TLNGRYIM 285
>gi|224098664|ref|XP_002190377.1| PREDICTED: non-POU domain-containing octamer-binding protein
isoform 1 [Taeniopygia guttata]
Length = 469
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF-ANSLGQIMAINGV 111
+ + +FVG L P++T+E++R+ F +YG+ V I KG GF++ +L +I +
Sbjct: 67 TQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEIAKVELD 126
Query: 112 GHTMEGKFMMV 122
+ GK + V
Sbjct: 127 NMPLRGKQLRV 137
>gi|195585268|ref|XP_002082411.1| GD11555 [Drosophila simulans]
gi|194194420|gb|EDX07996.1| GD11555 [Drosophila simulans]
Length = 989
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 13/80 (16%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFVQFANS 101
GD + T +++G L+P ++++ L + F +YG +AS+KI G+ CGFV + +
Sbjct: 210 GDPNTTNLYLGNLNPKISEQQLMEIFGRYGPLASIKIMWPRSEEEKQRGRNCGFVAYMSR 269
Query: 102 LGQIMAINGVGHTMEGKFMM 121
A+ T+ G+++M
Sbjct: 270 KDAERALK----TLNGRYIM 285
>gi|195346271|ref|XP_002039689.1| GM15794 [Drosophila sechellia]
gi|194135038|gb|EDW56554.1| GM15794 [Drosophila sechellia]
Length = 957
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 13/80 (16%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFVQFANS 101
GD + T +++G L+P ++++ L + F +YG +AS+KI G+ CGFV + +
Sbjct: 210 GDPNTTNLYLGNLNPKISEQQLMEIFGRYGPLASIKIMWPRSEEEKQRGRNCGFVAYMSR 269
Query: 102 LGQIMAINGVGHTMEGKFMM 121
A+ T+ G+++M
Sbjct: 270 KDAERALK----TLNGRYIM 285
>gi|32564506|ref|NP_871980.1| Protein TIAR-1, isoform f [Caenorhabditis elegans]
gi|373219014|emb|CCD65019.1| Protein TIAR-1, isoform f [Caenorhabditis elegans]
Length = 295
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 8/108 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +MNG + R +R AT + G Q++ S Y Q+ GD NT+++V
Sbjct: 80 IEQMNGQWLGRRTIRTNWAT--RKPGDQEKPSH---YNEKSYDEIYNQTSGD--NTSVYV 132
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAI 108
G + ++T++++RQ F+ +G I V+I +G FV+F N AI
Sbjct: 133 GNI-ASLTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAI 179
>gi|195455607|ref|XP_002074793.1| GK22959 [Drosophila willistoni]
gi|194170878|gb|EDW85779.1| GK22959 [Drosophila willistoni]
Length = 929
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 13/85 (15%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD + T +++G L+P ++++ L + F +YG +AS+KI G+ CGFV
Sbjct: 210 GSFDTGDPNTTNLYLGNLNPKISEQQLMEIFGRYGPLASIKIMWPRSEEEKQRGRNCGFV 269
Query: 97 QFANSLGQIMAINGVGHTMEGKFMM 121
+ + A+ T+ G+++M
Sbjct: 270 AYMSRKDAERAL----RTLNGRYVM 290
>gi|388493798|gb|AFK34965.1| unknown [Medicago truncatula]
Length = 185
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 10/72 (13%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANSLGQIMAI 108
N +FV GL+ T E LR+ F ++GE+ V++ KG G+V++A S I
Sbjct: 43 NEIVFVTGLNKRTTSETLREAFKKFGEVKQVRVVADRVSGYSKGFGYVRYATSEDAAKGI 102
Query: 109 NGVGHTMEGKFM 120
G M+GKF+
Sbjct: 103 QG----MDGKFL 110
>gi|168040006|ref|XP_001772487.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676284|gb|EDQ62769.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 428
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 9/69 (13%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF---------ANSL 102
D S T++VGGL VT+EDL+ YGEI S+++ + C FV + A+ L
Sbjct: 214 DMSIKTLYVGGLIDRVTEEDLKVQSYSYGEIESIRMVRQRACAFVTYTTREGAEEAADHL 273
Query: 103 GQIMAINGV 111
+ ING+
Sbjct: 274 ANKLVINGL 282
>gi|47087353|ref|NP_998557.1| heterogeneous nuclear ribonucleoprotein D-like [Danio rerio]
gi|33416353|gb|AAH55525.1| Heterogeneous nuclear ribonucleoprotein D-like [Danio rerio]
Length = 296
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFV 96
P + +G +FVGGL P++T+E LR+ F YGEI S+++P +G FV
Sbjct: 102 PKRAKAIKGKEPPKKVFVGGLSPDITEEQLREYFGVYGEIESIELPTDTKTNERRGFCFV 161
Query: 97 QFA 99
FA
Sbjct: 162 TFA 164
>gi|334326768|ref|XP_001373196.2| PREDICTED: DAZ-associated protein 1-like [Monodelphis domestica]
Length = 452
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 10/83 (12%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQ 97
G G + + +FVGGLD + T E LR FSQYGE+ I K G GFV+
Sbjct: 44 GHGEDRDSPPGSRKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVK 103
Query: 98 FA--NSLGQIMAINGVGHTMEGK 118
F N +G ++A HT++G+
Sbjct: 104 FKDPNCVGTVLASR--PHTLDGR 124
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Query: 45 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQF 98
+GP+S+ + SN IFVGG+ N + +LR+ F ++G + V + +G GF+ F
Sbjct: 149 KGPRSDNNKSNK-IFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITF 207
Query: 99 ANSLGQIMAINGVGHTMEGKFMMVMGMLFRHQMTQ 133
+ A+N H + GK + V R +Q
Sbjct: 208 EDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQ 242
>gi|260802618|ref|XP_002596189.1| hypothetical protein BRAFLDRAFT_118019 [Branchiostoma floridae]
gi|229281443|gb|EEN52201.1| hypothetical protein BRAFLDRAFT_118019 [Branchiostoma floridae]
Length = 1520
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANS 101
GP + +FVGGL TD ++ F+ +GEI S+ + GK G FV+F +
Sbjct: 10 GPSKHNGTDTYDVFVGGLPDTATDRLVKTRFNTFGEIHSIAVFKGKYPGTKVAFVRFFSK 69
Query: 102 LG---QIMAINGVGHTMEGKFMMVMGMLFRHQ 130
L +M N G T +GKF+MV R Q
Sbjct: 70 LDADKAVMETN--GETFDGKFLMVRRTQVREQ 99
>gi|195391718|ref|XP_002054507.1| GJ22768 [Drosophila virilis]
gi|194152593|gb|EDW68027.1| GJ22768 [Drosophila virilis]
Length = 504
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 16/119 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQ--SEGDSSNTTI 58
+T MNG + SR +R AT RK ++ N P + ++ SN T+
Sbjct: 229 ITAMNGQWLGSRSIRTNWAT-RKPPASKE----------NIKPLTFDEVYNQSSPSNCTV 277
Query: 59 FVGGLDPNVT---DEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHT 114
+VGG++ +T +E L++ F+ YG I +++ KG FV+F+ AI GV +T
Sbjct: 278 YVGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKDKGYAFVRFSTKEAATHAIVGVHNT 336
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 9/62 (14%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQF---ANSLGQIMAI 108
IFVG L + + LR+ F+ +GEI+ ++ KG GFV F + + I A+
Sbjct: 173 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 232
Query: 109 NG 110
NG
Sbjct: 233 NG 234
>gi|449664731|ref|XP_002156267.2| PREDICTED: nucleolysin TIA-1 isoform p40-like [Hydra
magnipapillata]
Length = 361
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 6/90 (6%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANSLGQIMA 107
++ TIFVG LD ++TD +LRQ F +GEI + K+ K GF+ F N A
Sbjct: 69 ASITIFVGDLDDDLTDSELRQAFEPFGEILNAKVVRDAATEKSKNYGFISFTNKPDAERA 128
Query: 108 INGVGHTMEGKFMMVMGMLFRHQMTQACTL 137
I + M + + R+Q ++ L
Sbjct: 129 IRDMHGAMLKRRPIKTNWATRNQNSKPSQL 158
>gi|88603697|ref|YP_503875.1| RNA recognition motif-containing protein [Methanospirillum hungatei
JF-1]
gi|88189159|gb|ABD42156.1| RNA-binding region RNP-1 (RNA recognition motif) [Methanospirillum
hungatei JF-1]
Length = 105
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTM-E 116
++VG L +V ++ L+ FSQYG++ SVKI KG GFV+ S A++ + T+ E
Sbjct: 6 LYVGNLTYSVKEDQLKDLFSQYGDVVSVKIIEQKGFGFVEMGTSEEAQAAMDALNQTVFE 65
Query: 117 GKFMMV 122
G+ M +
Sbjct: 66 GRTMRI 71
>gi|71895845|ref|NP_001026703.1| non-POU domain-containing octamer-binding protein [Gallus gallus]
gi|53134059|emb|CAG32298.1| hypothetical protein RCJMB04_22g22 [Gallus gallus]
Length = 473
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF-ANSLGQIMAINGV 111
+ + +FVG L P++T+E++R+ F +YG+ V I KG GF++ +L +I +
Sbjct: 71 TQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEIAKVELD 130
Query: 112 GHTMEGKFMMV 122
+ GK + V
Sbjct: 131 NMPLRGKQLRV 141
>gi|118489085|gb|ABK96349.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 171
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 59 FVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANSLGQIMAINGV- 111
FVGGL TD+ L++ FSQYGEI KI +G GFV F N AI+G+
Sbjct: 10 FVGGLAWATTDQVLQEAFSQYGEIIDSKIINDRETGRSRGFGFVTFGNEKAMRDAIDGMN 69
Query: 112 GHTMEGKFMMV 122
G ++G+ + V
Sbjct: 70 GQDLDGRNITV 80
>gi|118481677|gb|ABK92779.1| unknown [Populus trichocarpa]
gi|118481702|gb|ABK92791.1| unknown [Populus trichocarpa]
gi|118482754|gb|ABK93295.1| unknown [Populus trichocarpa]
gi|118483202|gb|ABK93505.1| unknown [Populus trichocarpa]
Length = 170
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 59 FVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANSLGQIMAINGV- 111
FVGGL TD+ L++ FSQYGEI KI +G GFV F N AI+G+
Sbjct: 10 FVGGLAWATTDQVLQEAFSQYGEIIDSKIINDRETGRSRGFGFVTFGNEKAMRDAIDGMN 69
Query: 112 GHTMEGKFMMV 122
G ++G+ + V
Sbjct: 70 GQDLDGRNITV 80
>gi|15222009|ref|NP_175322.1| nucleolin [Arabidopsis thaliana]
gi|75334377|sp|Q9FVQ1.1|NUCL1_ARATH RecName: Full=Nucleolin 1; AltName: Full=Protein NUCLEOLIN LIKE 1;
Short=AtNUC-L1; AltName: Full=Protein PARALLEL 1;
Short=AtPARL1
gi|11094815|gb|AAG29744.1|AC084414_12 nuM1 protein, putative [Arabidopsis thaliana]
gi|28973759|gb|AAO64195.1| putative nucleolin [Arabidopsis thaliana]
gi|332194246|gb|AEE32367.1| nucleolin [Arabidopsis thaliana]
Length = 557
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 62/131 (47%), Gaps = 20/131 (15%)
Query: 3 EMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGG 62
E +G R +R+ A R G + ++ Q G +G G GD IFV G
Sbjct: 356 EFHGRPLLGREIRLDIAQERGERGERPAFTPQSGNFRSGGDG------GDEKK--IFVKG 407
Query: 63 LDPNVTDED----LRQPFSQYGEIASVKIPV------GKGCGFVQFANSLGQIMAINGVG 112
D +++++D LR+ FS GEI +V +P+ KG +++F+ + + +N G
Sbjct: 408 FDASLSEDDIKNTLREHFSSCGEIKNVSVPIDRDTGNSKGIAYLEFSEGKEKALELN--G 465
Query: 113 HTMEGKFMMVM 123
M G F +V+
Sbjct: 466 SDMGGGFYLVV 476
>gi|444727510|gb|ELW67998.1| Non-POU domain-containing octamer-binding protein [Tupaia
chinensis]
Length = 310
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF-ANSLGQIMAINGV 111
+ + +FVG L P++T+E++R+ F +YG+ V I KG GF++ +L +I +
Sbjct: 62 TQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEIAKVELD 121
Query: 112 GHTMEGKFMMV 122
+ GK + V
Sbjct: 122 NMPLRGKQLRV 132
>gi|395333318|gb|EJF65695.1| hypothetical protein DICSQDRAFT_77386 [Dichomitus squalens LYAD-421
SS1]
Length = 1299
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Query: 47 PQSEGDSS-----NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANS 101
P+SE S+ ++++G LD + T E L F+ YG I S+++ K CGFV F +
Sbjct: 435 PKSENSSTQMQTPTRSLWIGNLDSSFTSEQLIHVFAPYGAIESLRLLPEKECGFVNFVDQ 494
Query: 102 LGQIMAINGVGHTMEGKFMMVMGMLFR 128
I A V + + G M G R
Sbjct: 495 ADAIRAKEDVLNRLGGDIGMPNGQTVR 521
>gi|388567211|ref|ZP_10153648.1| putative RNA-binding protein rbpB [Hydrogenophaga sp. PBC]
gi|388265594|gb|EIK91147.1| putative RNA-binding protein rbpB [Hydrogenophaga sp. PBC]
Length = 97
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 7/74 (9%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANSLGQIMAIN 109
+ ++VG L +V D+ LR FS++G +AS K+ KG GFV+ A+ AIN
Sbjct: 3 SKLYVGNLPYSVNDDSLRHNFSEFGNVASAKVMTDRDSGRSKGFGFVEMASEAEAQAAIN 62
Query: 110 GV-GHTMEGKFMMV 122
G+ G +++G+ ++V
Sbjct: 63 GLNGQSVDGRQIVV 76
>gi|380258957|pdb|3SDE|B Chain B, Crystal Structure Of A Paraspeckle-Protein Heterodimer,
Pspc1NONO
Length = 261
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF-ANSLGQIMAINGV 111
+ + +FVG L P++T+E++R+ F +YG+ V I KG GF++ +L +I +
Sbjct: 20 TQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEIAKVELD 79
Query: 112 GHTMEGKFMMV 122
+ GK + V
Sbjct: 80 NMPLRGKQLRV 90
>gi|449499204|ref|XP_004176528.1| PREDICTED: non-POU domain-containing octamer-binding protein
[Taeniopygia guttata]
Length = 460
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF-ANSLGQIMAINGV 111
+ + +FVG L P++T+E++R+ F +YG+ V I KG GF++ +L +I +
Sbjct: 58 TQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEIAKVELD 117
Query: 112 GHTMEGKFMMV 122
+ GK + V
Sbjct: 118 NMPLRGKQLRV 128
>gi|405118731|gb|AFR93505.1| cytoplasmic protein [Cryptococcus neoformans var. grubii H99]
Length = 713
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHTMEG 117
+FVG LDP ++DLR S++G I VKI K GF+ F S+ M + G T +G
Sbjct: 345 VFVGNLDPETNEQDLRNELSRFGPIDQVKIVRDKNIGFIHFL-SISTAMKVVGTLPTEQG 403
>gi|108383479|gb|ABF85732.1| IP09238p [Drosophila melanogaster]
Length = 791
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 12/117 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+T MNG + SR +R AT + + + N + SN T++V
Sbjct: 510 ITAMNGQWLGSRSIRTNWATRKPPASKENIKPLTFDEVYN---------QSSPSNCTVYV 560
Query: 61 GGLDPNVT---DEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHT 114
GG++ +T +E L++ F+ YG I +++ KG FV+F+ AI GV +T
Sbjct: 561 GGVNSALTALSEEVLQKTFAPYGAIQEIRVFKDKGYAFVRFSTKEAATHAIVGVHNT 617
>gi|442621493|ref|NP_001163754.2| CG34362, isoform D, partial [Drosophila melanogaster]
gi|440217977|gb|ACZ95048.2| CG34362, isoform D, partial [Drosophila melanogaster]
Length = 799
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 12/117 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+T MNG + SR +R AT + + + N + SN T++V
Sbjct: 518 ITAMNGQWLGSRSIRTNWATRKPPASKENIKPLTFDEVYN---------QSSPSNCTVYV 568
Query: 61 GGLDPNVT---DEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHT 114
GG++ +T +E L++ F+ YG I +++ KG FV+F+ AI GV +T
Sbjct: 569 GGVNSALTALSEEVLQKTFAPYGAIQEIRVFKDKGYAFVRFSTKEAATHAIVGVHNT 625
>gi|340729952|ref|XP_003403257.1| PREDICTED: RNA-binding protein squid-like isoform 1 [Bombus
terrestris]
Length = 362
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 47/104 (45%), Gaps = 20/104 (19%)
Query: 24 SSGYQQQYSSQGGYASNG---APGQGPQSEGDSS---------NTTIFVGGLDPNVTDED 71
S Q Q G A NG A G +S+ D S + +FVGGL TD++
Sbjct: 10 SEDIADQNFEQNGEAENGGGDATENGQESQEDRSTGGNQDSLNDRKLFVGGLSWETTDKE 69
Query: 72 LRQPFSQYGEIASVKIPVG------KGCGFVQF--ANSLGQIMA 107
LR F YG+I S+ + +G F+ F A SL +IMA
Sbjct: 70 LRDHFGTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKIMA 113
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 24/34 (70%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK 91
+FVGGL ++D+D++ FSQ+G I V++P K
Sbjct: 136 VFVGGLSTELSDDDIKHFFSQFGTIVEVEMPFDK 169
>gi|340372441|ref|XP_003384752.1| PREDICTED: pre-mRNA-splicing factor RBM22-like [Amphimedon
queenslandica]
Length = 412
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
D S T++++GGL ++++ DLR F Q+GEI + + + C F+ F
Sbjct: 228 DKSITSLYIGGLSDDISERDLRDHFYQFGEIEDINVIHKQNCAFITFT 275
>gi|281212020|gb|EFA86181.1| hypothetical protein PPL_00743 [Polysphondylium pallidum PN500]
Length = 602
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 9/67 (13%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFA---NSLG 103
S++ ++V L+P VT EDL + FS++GE+ KI V + GFV F+ N+L
Sbjct: 236 STHANLYVNRLEPQVTKEDLAEAFSKFGEVVETKILVDPNTGSSRCVGFVHFSARRNALT 295
Query: 104 QIMAING 110
+ A+NG
Sbjct: 296 ALSAMNG 302
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANSLGQIMAIN 109
T + + + + + EDLR F+ +GEI S K+ + G GFV++A G AI
Sbjct: 153 TNLIINNIPKHFSSEDLRDMFANFGEIVSYKVVTKRGNSKNMGYGFVKYATPEGATAAIE 212
Query: 110 GV-GHTMEGKFMMV 122
+ GH+++ KF+ V
Sbjct: 213 QMNGHSIDLKFLKV 226
>gi|429329604|gb|AFZ81363.1| RNA recognition motif domain-containing protein [Babesia equi]
Length = 494
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANSLGQI 105
DS I++G LDP+V +ED+R FS +GEI +++P KG FV++
Sbjct: 148 DSQQCRIYIGSLDPDVKEEDIRTIFSSFGEITCIEMPRDPSTNKSKGYCFVEYRKKESAD 207
Query: 106 MAI 108
+AI
Sbjct: 208 VAI 210
>gi|350396363|ref|XP_003484529.1| PREDICTED: RNA-binding protein squid-like isoform 1 [Bombus
impatiens]
Length = 314
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 43/85 (50%), Gaps = 12/85 (14%)
Query: 35 GGYASNGAPGQGPQSEG---DSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG 90
G A NG Q +S G DS N +FVGGL TD++LR F YG+I S+ +
Sbjct: 29 GDAAENGQESQEDRSTGGNQDSLNDRKLFVGGLSWETTDKELRDHFGTYGDIESINVKTD 88
Query: 91 ------KGCGFVQF--ANSLGQIMA 107
+G F+ F A SL +IMA
Sbjct: 89 PNTGRSRGFAFIVFAKAESLDKIMA 113
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 24/34 (70%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK 91
+FVGGL ++D+D++ FSQ+G I V++P K
Sbjct: 136 VFVGGLSTELSDDDIKHFFSQFGTIVEVEMPFDK 169
>gi|147838149|emb|CAN74140.1| hypothetical protein VITISV_008914 [Vitis vinifera]
Length = 544
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 8/68 (11%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQF---ANSLG 103
D+ T +++ LDP+VT+E LR+ F ++G+IAS+ I + +G GFV F ++
Sbjct: 207 DAKYTNLYIKNLDPDVTEEALREKFFEFGKIASLVISKDENGMSRGFGFVNFESPEDAKR 266
Query: 104 QIMAINGV 111
+ A+NG+
Sbjct: 267 ALEALNGL 274
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI----PVGKGC--GFVQFANSLGQIM 106
++ +++VG L P++TD L FS++ +ASV+I G+ G+V F +
Sbjct: 9 AAPASLYVGDLHPDITDGLLFDAFSEFKSLASVRICRDSSSGRSLCYGYVNFISPQDASH 68
Query: 107 AINGVGHTM-EGKFMMVM 123
AI HTM GK + VM
Sbjct: 69 AIEAKNHTMLHGKVIRVM 86
>gi|119223939|gb|AAI26843.1| TIAL1 protein [Bos taurus]
Length = 279
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 49 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 108
Query: 94 GFVQFANSLGQIMAINGVG 112
GFV F N L AI +G
Sbjct: 109 GFVSFYNKLDAENAIVHMG 127
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV-GH 113
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ AI V G
Sbjct: 172 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 231
Query: 114 TMEG 117
T+EG
Sbjct: 232 TIEG 235
>gi|449488366|ref|XP_004158014.1| PREDICTED: polyadenylate-binding protein RBP45B-like [Cucumis
sativus]
Length = 260
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/29 (72%), Positives = 24/29 (82%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQ 29
MTEMNGV+CSSRPMRIG A + +SG QQ
Sbjct: 216 MTEMNGVHCSSRPMRIGPAANKNTSGSQQ 244
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 10/76 (13%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQF 98
G + + DS + TIFVG L +VTD L++ F ++Y + K+ + KG GFV+F
Sbjct: 147 GEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVKF 206
Query: 99 ANSLGQIMA---INGV 111
+ QI A +NGV
Sbjct: 207 GDESEQIRAMTEMNGV 222
>gi|115477340|ref|NP_001062266.1| Os08g0520300 [Oryza sativa Japonica Group]
gi|42408523|dbj|BAD09702.1| putative oligouridylate binding protein [Oryza sativa Japonica
Group]
gi|42409171|dbj|BAD10437.1| putative oligouridylate binding protein [Oryza sativa Japonica
Group]
gi|113624235|dbj|BAF24180.1| Os08g0520300 [Oryza sativa Japonica Group]
gi|215697677|dbj|BAG91671.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222640879|gb|EEE69011.1| hypothetical protein OsJ_27962 [Oryza sativa Japonica Group]
Length = 447
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 13/121 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGA---PG-QGPQSEGDSSN- 55
+TEM G + SR +R AT + Q+ + +NG+ PG + Q G N
Sbjct: 216 ITEMTGKWLGSRQIRCNWATKNNAEEKQETDNHNAVVLTNGSSSNPGMEASQDTGSKENP 275
Query: 56 ------TTIFVGGLDPNVTDEDLRQPFSQY--GEIASVKIPVGKGCGFVQFANSLGQIMA 107
TT++VG L V ++L + F G I V++ KG GFV+++N +A
Sbjct: 276 ENNPDCTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQDKGFGFVRYSNHGEAALA 335
Query: 108 I 108
I
Sbjct: 336 I 336
>gi|71993749|ref|NP_502014.2| Protein T11G6.8 [Caenorhabditis elegans]
gi|30145708|emb|CAA93419.2| Protein T11G6.8 [Caenorhabditis elegans]
Length = 408
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 6/62 (9%)
Query: 41 GAPGQGPQSEGDSSNTTIFVGGLDPN----VTDEDLRQPFSQYGEIASVKIPVGKGCGFV 96
AP P + D++ TT+++G L P+ VT++DL F QYG+I +++ KGC F+
Sbjct: 222 AAPTLSPPA--DTTITTLYIGNLGPSGAQQVTEKDLNDFFYQYGDIRCLRVLTEKGCAFI 279
Query: 97 QF 98
+F
Sbjct: 280 EF 281
>gi|2281006|dbj|BAA21559.1| T-cluster binding protein [Homo sapiens]
gi|119569770|gb|EAW49385.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_a [Homo sapiens]
Length = 265
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 42 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 101
Query: 94 GFVQFANSLGQIMAINGVG 112
GFV F N L AI +G
Sbjct: 102 GFVSFYNKLDAENAIVHMG 120
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 10/120 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAAT--PRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTI 58
+ M G + R +R AT P Q+ + Q + + ++ N T+
Sbjct: 116 IVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRF-------EDVVNQSSPKNCTV 168
Query: 59 FVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGV-GHTMEG 117
+ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ AI V G T+EG
Sbjct: 169 YCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEG 228
>gi|156083280|ref|XP_001609124.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP) domain containing
protein [Babesia bovis T2Bo]
gi|154796374|gb|EDO05556.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP) domain containing
protein [Babesia bovis]
Length = 244
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-------VGKGCGFVQFANSLGQIMAING 110
IF+ L T DL+ FSQ+G I + IP V KG GFV F N + A+N
Sbjct: 147 IFISKLAYEATHNDLQSYFSQFGNITDIHIPRYSGNPAVNKGYGFVSFDNEASLVKALNV 206
Query: 111 VGHTMEGKFMMV 122
H + G+ +++
Sbjct: 207 SSHIILGREVVL 218
>gi|125591601|gb|EAZ31951.1| hypothetical protein OsJ_16124 [Oryza sativa Japonica Group]
Length = 867
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 55/103 (53%), Gaps = 11/103 (10%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG----KGCGFVQFA 99
GQ ++E D S+T + V + T++DLRQ FS +G+I S+++P+ +G FV+F
Sbjct: 732 GQTKKNEKDKSSTKLLVRNVAFEATEKDLRQLFSPFGQIKSLRLPMKFGSHRGFAFVEFV 791
Query: 100 NSLGQIMAINGVGHT-MEGKFMMVMGMLFRHQMTQACTLQQLR 141
A+ + T + G+ +++ + + TL++LR
Sbjct: 792 TKQEAQNALQALASTHLYGRHLVI------ERAKEGETLEELR 828
>gi|125549686|gb|EAY95508.1| hypothetical protein OsI_17353 [Oryza sativa Indica Group]
Length = 904
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 55/103 (53%), Gaps = 11/103 (10%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG----KGCGFVQFA 99
GQ ++E D S+T + V + T++DLRQ FS +G+I S+++P+ +G FV+F
Sbjct: 769 GQTKKNEKDKSSTKLLVRNVAFEATEKDLRQLFSPFGQIKSLRLPMKFGSHRGFAFVEFV 828
Query: 100 NSLGQIMAINGVGHT-MEGKFMMVMGMLFRHQMTQACTLQQLR 141
A+ + T + G+ +++ + + TL++LR
Sbjct: 829 TKQEAQNALQALASTHLYGRHLVI------ERAKEGETLEELR 865
>gi|115460478|ref|NP_001053839.1| Os04g0611500 [Oryza sativa Japonica Group]
gi|113565410|dbj|BAF15753.1| Os04g0611500, partial [Oryza sativa Japonica Group]
Length = 536
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 55/103 (53%), Gaps = 11/103 (10%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG----KGCGFVQFA 99
GQ ++E D S+T + V + T++DLRQ FS +G+I S+++P+ +G FV+F
Sbjct: 401 GQTKKNEKDKSSTKLLVRNVAFEATEKDLRQLFSPFGQIKSLRLPMKFGSHRGFAFVEFV 460
Query: 100 NSLGQIMAINGVGHT-MEGKFMMVMGMLFRHQMTQACTLQQLR 141
A+ + T + G+ +++ + + TL++LR
Sbjct: 461 TKQEAQNALQALASTHLYGRHLVI------ERAKEGETLEELR 497
>gi|38345802|emb|CAE03574.2| OSJNBa0085I10.19 [Oryza sativa Japonica Group]
gi|38568013|emb|CAE05198.3| OSJNBa0070C17.5 [Oryza sativa Japonica Group]
Length = 904
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 55/103 (53%), Gaps = 11/103 (10%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG----KGCGFVQFA 99
GQ ++E D S+T + V + T++DLRQ FS +G+I S+++P+ +G FV+F
Sbjct: 769 GQTKKNEKDKSSTKLLVRNVAFEATEKDLRQLFSPFGQIKSLRLPMKFGSHRGFAFVEFV 828
Query: 100 NSLGQIMAINGVGHT-MEGKFMMVMGMLFRHQMTQACTLQQLR 141
A+ + T + G+ +++ + + TL++LR
Sbjct: 829 TKQEAQNALQALASTHLYGRHLVI------ERAKEGETLEELR 865
>gi|442621490|ref|NP_001097951.2| CG34362, isoform B, partial [Drosophila melanogaster]
gi|440217976|gb|AAF56772.4| CG34362, isoform B, partial [Drosophila melanogaster]
Length = 792
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 12/117 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+T MNG + SR +R AT + + + N + SN T++V
Sbjct: 518 ITAMNGQWLGSRSIRTNWATRKPPASKENIKPLTFDEVYN---------QSSPSNCTVYV 568
Query: 61 GGLDPNVT---DEDLRQPFSQYGEIASVKIPVGKGCGFVQFANSLGQIMAINGVGHT 114
GG++ +T +E L++ F+ YG I +++ KG FV+F+ AI GV +T
Sbjct: 569 GGVNSALTALSEEVLQKTFAPYGAIQEIRVFKDKGYAFVRFSTKEAATHAIVGVHNT 625
>gi|307719265|ref|YP_003874797.1| RNA-binding region RNP-1 [Spirochaeta thermophila DSM 6192]
gi|386347364|ref|YP_006045613.1| RNP-1 like RNA-binding protein [Spirochaeta thermophila DSM 6578]
gi|306532990|gb|ADN02524.1| RNA-binding region RNP-1 [Spirochaeta thermophila DSM 6192]
gi|339412331|gb|AEJ61896.1| RNP-1 like RNA-binding protein [Spirochaeta thermophila DSM 6578]
Length = 101
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 7/72 (9%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANSLGQIMAINGV 111
I+ G L+ T++ LRQ F QYGE+ SVKI KG GFV+ A+ AI+ +
Sbjct: 5 IYAGNLNYQTTEDTLRQLFEQYGEVESVKIITDRDSGFSKGFGFVEMASEEAGEAAISAL 64
Query: 112 G-HTMEGKFMMV 122
H ++G+ + V
Sbjct: 65 NQHEVDGRQLRV 76
>gi|242011910|ref|XP_002426686.1| pre-mRNA-splicing factor SLT11, putative [Pediculus humanus
corporis]
gi|212510857|gb|EEB13948.1| pre-mRNA-splicing factor SLT11, putative [Pediculus humanus
corporis]
Length = 457
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF 98
D S TT++VG + +T+++L+ F QYGEI S+ + + C F+QF
Sbjct: 228 DKSVTTLYVGNVSDRITEKELQDHFYQYGEIRSITVLAKQQCAFIQF 274
>gi|449549543|gb|EMD40508.1| hypothetical protein CERSUDRAFT_44938, partial [Ceriporiopsis
subvermispora B]
Length = 151
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 6/60 (10%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANSLGQIMAINGV 111
IFVGGL+P +T+ D+ FSQYGE+ V +P KG GF+ + + ++A++ +
Sbjct: 32 IFVGGLNPELTEGDVITIFSQYGEVMDVNLPRHKDTGKTKGFGFLMYEDQRSTVLAVDNL 91
>gi|427796663|gb|JAA63783.1| Hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 965
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 9/91 (9%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGC 93
P G GD + T +++G L+P +T+++L + F +YG +ASVKI + C
Sbjct: 183 PSLGSFDTGDPNTTNLYLGNLNPKMTEQELCEIFGRYGPLASVKIMWPRSQEERQRKRNC 242
Query: 94 GFVQFANSLGQIMAINGVGHTMEGKFMMVMG 124
GFV + N AI + F M MG
Sbjct: 243 GFVAYMNRKDGERAIKHLSGQEVMGFEMKMG 273
>gi|395546211|ref|XP_003774983.1| PREDICTED: non-POU domain-containing octamer-binding protein
isoform 2 [Sarcophilus harrisii]
Length = 486
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF-ANSLGQIMAINGV 111
+ + +FVG L P++T+E++R+ F +YG+ V I KG GF++ +L +I +
Sbjct: 86 TQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEIAKVELD 145
Query: 112 GHTMEGKFMMV 122
+ GK + V
Sbjct: 146 NMPLRGKQLRV 156
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.132 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,468,662,848
Number of Sequences: 23463169
Number of extensions: 98107129
Number of successful extensions: 315076
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4227
Number of HSP's successfully gapped in prelim test: 6814
Number of HSP's that attempted gapping in prelim test: 300889
Number of HSP's gapped (non-prelim): 20006
length of query: 155
length of database: 8,064,228,071
effective HSP length: 117
effective length of query: 38
effective length of database: 9,614,004,594
effective search space: 365332174572
effective search space used: 365332174572
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 71 (32.0 bits)