Query 031686
Match_columns 155
No_of_seqs 113 out of 789
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 05:47:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031686.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031686hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bj5_A Protein disulfide-isome 99.9 1.4E-25 4.7E-30 160.0 13.2 121 34-154 7-133 (147)
2 4f9z_D Endoplasmic reticulum r 99.9 3.7E-24 1.3E-28 161.8 14.2 131 20-150 88-227 (227)
3 3ec3_A Protein disulfide-isome 99.9 1.2E-23 4.2E-28 161.2 14.3 130 20-154 93-234 (250)
4 2h8l_A Protein disulfide-isome 99.9 6.4E-24 2.2E-28 162.8 12.6 131 19-154 91-236 (252)
5 3us3_A Calsequestrin-1; calciu 99.9 1.7E-20 5.9E-25 150.9 15.1 132 20-154 206-354 (367)
6 3uem_A Protein disulfide-isome 99.8 1.6E-19 5.5E-24 144.0 17.1 135 20-154 96-236 (361)
7 2djk_A PDI, protein disulfide- 99.8 5.6E-20 1.9E-24 128.1 11.5 116 38-155 3-122 (133)
8 2r2j_A Thioredoxin domain-cont 99.8 1.1E-19 3.7E-24 146.7 10.8 131 20-154 197-335 (382)
9 1sji_A Calsequestrin 2, calseq 99.8 6.8E-19 2.3E-23 140.4 15.1 130 20-152 204-350 (350)
10 3f8u_A Protein disulfide-isome 99.8 1.1E-18 3.9E-23 144.0 13.5 130 20-154 196-340 (481)
11 2b5e_A Protein disulfide-isome 99.8 2.7E-18 9.1E-23 142.7 11.4 134 18-154 194-346 (504)
12 3apo_A DNAJ homolog subfamily 99.3 5.8E-11 2E-15 103.2 14.1 125 19-151 418-545 (780)
13 3ed3_A Protein disulfide-isome 99.0 2.7E-08 9.1E-13 77.7 14.8 122 19-145 121-264 (298)
14 1sji_A Calsequestrin 2, calseq 98.9 2.5E-08 8.6E-13 79.1 12.4 122 20-149 102-226 (350)
15 3idv_A Protein disulfide-isome 98.8 1.1E-07 3.7E-12 70.8 13.9 122 21-148 103-237 (241)
16 3us3_A Calsequestrin-1; calciu 98.8 3.2E-08 1.1E-12 79.2 11.2 120 20-147 104-226 (367)
17 3apo_A DNAJ homolog subfamily 98.7 1.1E-07 3.6E-12 82.7 12.5 127 20-150 522-658 (780)
18 3tco_A Thioredoxin (TRXA-1); d 98.7 1.5E-07 5.1E-12 61.3 10.3 103 40-147 3-108 (109)
19 2yzu_A Thioredoxin; redox prot 98.6 3.5E-07 1.2E-11 59.4 9.6 101 43-149 3-107 (109)
20 2trx_A Thioredoxin; electron t 98.6 1.2E-06 4E-11 57.1 12.1 100 42-147 3-107 (108)
21 1thx_A Thioredoxin, thioredoxi 98.6 1.4E-06 4.7E-11 57.2 12.3 103 41-149 7-114 (115)
22 3die_A Thioredoxin, TRX; elect 98.6 7.8E-07 2.7E-11 57.6 10.8 98 42-146 4-105 (106)
23 1nsw_A Thioredoxin, TRX; therm 98.6 4.5E-07 1.5E-11 58.8 9.4 99 43-147 2-104 (105)
24 2e0q_A Thioredoxin; electron t 98.6 7.7E-07 2.6E-11 57.1 10.3 99 43-148 1-103 (104)
25 2dml_A Protein disulfide-isome 98.6 1.7E-06 5.9E-11 58.3 12.4 104 41-148 17-124 (130)
26 3gnj_A Thioredoxin domain prot 98.6 6.7E-07 2.3E-11 58.5 9.7 100 43-148 6-110 (111)
27 3p2a_A Thioredoxin 2, putative 98.6 1.7E-06 5.8E-11 59.9 12.2 103 42-150 39-145 (148)
28 2dj1_A Protein disulfide-isome 98.6 2.1E-06 7E-11 58.7 12.4 107 41-153 17-129 (140)
29 3f8u_A Protein disulfide-isome 98.6 8.9E-07 3.1E-11 72.7 12.2 123 19-149 88-218 (481)
30 2i4a_A Thioredoxin; acidophIle 98.6 1.5E-06 5.3E-11 56.2 11.1 99 42-146 3-106 (107)
31 2voc_A Thioredoxin; electron t 98.5 1.5E-06 5.1E-11 57.4 11.1 101 43-150 3-107 (112)
32 2o8v_B Thioredoxin 1; disulfid 98.5 1.6E-06 5.3E-11 59.1 11.2 99 43-147 24-127 (128)
33 1x5d_A Protein disulfide-isome 98.5 1.6E-06 5.4E-11 58.5 11.1 107 41-152 7-121 (133)
34 1v98_A Thioredoxin; oxidoreduc 98.5 1.3E-06 4.6E-11 59.9 10.6 104 41-150 33-140 (140)
35 2ppt_A Thioredoxin-2; thiredox 98.5 1.3E-06 4.5E-11 61.5 10.3 102 43-150 49-154 (155)
36 1w4v_A Thioredoxin, mitochondr 98.5 1.8E-06 6.2E-11 57.7 10.4 103 39-147 11-118 (119)
37 3hxs_A Thioredoxin, TRXP; elec 98.5 1.9E-06 6.4E-11 59.0 10.3 105 40-149 21-140 (141)
38 1fb6_A Thioredoxin M; electron 98.5 2.6E-06 8.8E-11 55.0 10.4 99 43-147 2-105 (105)
39 3hz4_A Thioredoxin; NYSGXRC, P 98.5 1.2E-06 4.1E-11 60.4 9.2 102 41-148 6-112 (140)
40 3h79_A Thioredoxin-like protei 98.5 5.8E-06 2E-10 55.7 12.5 103 40-146 14-126 (127)
41 1dby_A Chloroplast thioredoxin 98.5 2.3E-06 7.8E-11 55.6 10.0 100 43-147 3-106 (107)
42 1x5e_A Thioredoxin domain cont 98.4 3.7E-06 1.3E-10 56.5 11.0 106 40-153 6-115 (126)
43 1t00_A Thioredoxin, TRX; redox 98.4 4.6E-06 1.6E-10 54.6 11.0 101 42-148 6-111 (112)
44 3ga4_A Dolichyl-diphosphooligo 98.4 1.1E-05 3.8E-10 58.6 13.8 116 31-150 8-155 (178)
45 2l5l_A Thioredoxin; structural 98.4 4.6E-06 1.6E-10 57.0 10.8 104 42-150 10-128 (136)
46 2l57_A Uncharacterized protein 98.4 5.8E-06 2E-10 55.5 11.1 104 43-150 6-119 (126)
47 2i1u_A Thioredoxin, TRX, MPT46 98.4 2.7E-06 9.2E-11 56.5 9.2 106 38-149 9-119 (121)
48 1mek_A Protein disulfide isome 98.4 3.4E-06 1.2E-10 55.5 9.5 102 42-149 8-118 (120)
49 3dxb_A Thioredoxin N-terminall 98.4 7.2E-06 2.5E-10 60.8 12.3 108 40-153 11-123 (222)
50 1xwb_A Thioredoxin; dimerizati 98.3 7.6E-06 2.6E-10 52.8 10.1 97 43-146 2-105 (106)
51 1oaz_A Thioredoxin 1; immune s 98.3 1.8E-06 6.1E-11 58.4 7.3 100 43-147 5-122 (123)
52 3apq_A DNAJ homolog subfamily 98.3 6.6E-06 2.2E-10 60.4 10.9 107 41-152 97-206 (210)
53 3aps_A DNAJ homolog subfamily 98.3 3.9E-06 1.3E-10 55.9 8.4 102 43-149 5-114 (122)
54 1ep7_A Thioredoxin CH1, H-type 98.3 7.1E-06 2.4E-10 53.6 9.4 99 43-148 4-111 (112)
55 3qfa_C Thioredoxin; protein-pr 98.3 5.9E-06 2E-10 55.0 9.1 99 41-146 12-115 (116)
56 3uvt_A Thioredoxin domain-cont 98.3 1.6E-05 5.6E-10 51.6 11.0 98 42-145 6-109 (111)
57 3idv_A Protein disulfide-isome 98.3 2.4E-05 8.3E-10 57.8 12.9 105 41-151 15-125 (241)
58 1r26_A Thioredoxin; redox-acti 98.3 1.3E-05 4.4E-10 54.3 10.5 100 42-149 20-124 (125)
59 2r2j_A Thioredoxin domain-cont 98.2 1.2E-05 4E-10 64.4 11.6 119 21-149 98-219 (382)
60 2ywm_A Glutaredoxin-like prote 98.2 5.5E-06 1.9E-10 61.3 9.0 120 20-148 95-220 (229)
61 2vim_A Thioredoxin, TRX; thior 98.2 1.5E-05 5.1E-10 51.1 9.9 96 44-147 2-104 (104)
62 2j23_A Thioredoxin; immune pro 98.2 1.3E-05 4.3E-10 53.7 9.6 101 40-147 14-120 (121)
63 3uem_A Protein disulfide-isome 98.2 2.1E-05 7.2E-10 62.0 12.4 117 24-146 214-355 (361)
64 2l4c_A Endoplasmic reticulum r 98.2 5.5E-06 1.9E-10 56.7 7.7 102 35-145 13-121 (124)
65 2dj3_A Protein disulfide-isome 98.2 1.2E-05 4.3E-10 54.2 9.4 109 40-152 6-122 (133)
66 3m9j_A Thioredoxin; oxidoreduc 98.2 1.4E-05 4.8E-10 51.5 9.1 98 43-147 2-105 (105)
67 3ul3_B Thioredoxin, thioredoxi 98.2 9.7E-06 3.3E-10 54.7 8.6 101 40-145 24-127 (128)
68 2vlu_A Thioredoxin, thioredoxi 98.2 1.8E-05 6E-10 52.6 9.6 102 40-149 12-121 (122)
69 1a8l_A Protein disulfide oxido 98.2 1.3E-05 4.3E-10 59.1 9.6 123 20-147 93-225 (226)
70 2djj_A PDI, protein disulfide- 98.2 4.2E-05 1.4E-09 50.6 11.2 102 41-150 7-119 (121)
71 4euy_A Uncharacterized protein 98.2 9.8E-06 3.4E-10 52.7 7.7 94 47-147 7-104 (105)
72 3qou_A Protein YBBN; thioredox 98.1 3.2E-05 1.1E-09 59.1 11.5 103 39-147 5-113 (287)
73 2xc2_A Thioredoxinn; oxidoredu 98.1 4.8E-05 1.6E-09 50.2 10.5 95 43-146 15-116 (117)
74 2h8l_A Protein disulfide-isome 98.1 2.3E-05 7.7E-10 59.3 9.8 103 37-147 2-112 (252)
75 2qsi_A Putative hydrogenase ex 98.1 4.8E-05 1.6E-09 53.0 10.6 105 35-148 12-123 (137)
76 1syr_A Thioredoxin; SGPP, stru 98.1 2.3E-05 7.9E-10 51.5 8.5 98 42-147 10-111 (112)
77 2pu9_C TRX-F, thioredoxin F-ty 98.1 0.00015 5.1E-09 47.2 12.3 103 40-148 4-111 (111)
78 3ec3_A Protein disulfide-isome 98.1 1.6E-05 5.4E-10 60.2 8.4 102 38-147 3-114 (250)
79 3f3q_A Thioredoxin-1; His TAG, 98.1 3.6E-05 1.2E-09 50.4 9.1 94 46-146 12-108 (109)
80 2es7_A Q8ZP25_salty, putative 98.0 1.5E-05 5.3E-10 55.5 7.2 102 42-150 18-127 (142)
81 3d6i_A Monothiol glutaredoxin- 98.0 9.3E-05 3.2E-09 48.3 10.5 99 43-148 2-109 (112)
82 2qc7_A ERP31, ERP28, endoplasm 98.0 9.2E-05 3.1E-09 56.1 11.5 106 41-146 5-117 (240)
83 1gh2_A Thioredoxin-like protei 98.0 0.0002 6.9E-09 46.3 11.2 97 43-147 3-106 (107)
84 3ed3_A Protein disulfide-isome 97.9 8.7E-05 3E-09 57.6 10.7 108 39-148 15-142 (298)
85 2qgv_A Hydrogenase-1 operon pr 97.9 3.2E-05 1.1E-09 54.0 7.3 101 43-149 19-126 (140)
86 2l6c_A Thioredoxin; oxidoreduc 97.9 6.4E-05 2.2E-09 49.3 8.5 99 44-149 6-107 (110)
87 2wz9_A Glutaredoxin-3; protein 97.9 0.00011 3.8E-09 51.1 10.2 105 40-151 11-121 (153)
88 2b5e_A Protein disulfide-isome 97.9 0.00014 4.7E-09 60.0 12.2 104 41-149 14-123 (504)
89 1ti3_A Thioredoxin H, PTTRXH1; 97.9 5E-05 1.7E-09 49.4 7.8 98 43-148 6-112 (113)
90 2c0g_A ERP29 homolog, windbeut 97.9 0.00029 9.8E-09 53.6 13.0 106 41-147 16-131 (248)
91 1xfl_A Thioredoxin H1; AT3G510 97.9 9.4E-05 3.2E-09 49.7 9.2 99 41-147 16-123 (124)
92 2vm1_A Thioredoxin, thioredoxi 97.9 0.00011 3.8E-09 48.1 9.3 101 41-149 6-115 (118)
93 2kuc_A Putative disulphide-iso 97.9 0.00012 4.1E-09 49.0 9.5 106 43-150 8-123 (130)
94 2yj7_A LPBCA thioredoxin; oxid 97.1 1.9E-06 6.5E-11 55.4 0.0 99 43-146 3-105 (106)
95 1faa_A Thioredoxin F; electron 97.8 0.00033 1.1E-08 46.5 11.0 101 40-147 17-123 (124)
96 2oe3_A Thioredoxin-3; electron 97.8 8.5E-05 2.9E-09 49.2 7.2 95 43-145 14-113 (114)
97 3d22_A TRXH4, thioredoxin H-ty 97.8 0.00028 9.7E-09 47.8 9.7 101 43-151 26-135 (139)
98 1fo5_A Thioredoxin; disulfide 97.7 0.00039 1.3E-08 42.7 9.0 77 61-146 5-84 (85)
99 3fk8_A Disulphide isomerase; A 97.7 0.0003 1E-08 47.3 9.0 90 56-147 27-132 (133)
100 2b5x_A YKUV protein, TRXY; thi 97.7 0.0011 3.6E-08 44.7 11.5 102 46-149 17-146 (148)
101 1zma_A Bacterocin transport ac 97.7 0.00029 9.8E-09 46.5 8.3 101 41-144 12-117 (118)
102 3emx_A Thioredoxin; structural 97.7 0.00017 5.9E-09 49.0 7.3 99 43-150 18-128 (135)
103 2av4_A Thioredoxin-like protei 97.6 0.00086 2.9E-08 47.7 10.8 101 43-149 23-140 (160)
104 2f51_A Thioredoxin; electron t 97.6 0.00033 1.1E-08 46.4 8.2 102 41-148 3-113 (118)
105 3q6o_A Sulfhydryl oxidase 1; p 97.6 0.002 6.8E-08 48.0 13.2 107 42-151 13-130 (244)
106 2dj0_A Thioredoxin-related tra 97.6 5.4E-05 1.9E-09 51.5 4.1 79 41-121 7-95 (137)
107 3zzx_A Thioredoxin; oxidoreduc 97.6 0.00084 2.9E-08 44.0 9.6 96 43-146 2-104 (105)
108 1wou_A Thioredoxin -related pr 97.6 0.0002 6.8E-09 47.9 6.6 98 42-145 6-122 (123)
109 3cxg_A Putative thioredoxin; m 97.5 0.00061 2.1E-08 46.2 8.5 102 42-150 21-131 (133)
110 1nho_A Probable thioredoxin; b 97.5 0.00047 1.6E-08 42.4 7.3 77 62-147 5-84 (85)
111 3gix_A Thioredoxin-like protei 97.5 0.00052 1.8E-08 47.7 8.2 98 47-149 10-122 (149)
112 3t58_A Sulfhydryl oxidase 1; o 97.5 0.0016 5.6E-08 54.4 12.6 107 42-150 13-129 (519)
113 1wmj_A Thioredoxin H-type; str 97.5 7.5E-05 2.6E-09 49.9 3.6 105 41-153 14-127 (130)
114 2hls_A Protein disulfide oxido 97.4 0.0045 1.5E-07 46.4 12.6 121 20-150 97-228 (243)
115 1qgv_A Spliceosomal protein U5 97.4 0.0016 5.5E-08 44.8 9.3 96 48-149 11-122 (142)
116 2fwh_A Thiol:disulfide interch 97.4 0.0014 4.6E-08 44.3 8.7 105 40-147 10-127 (134)
117 2lja_A Putative thiol-disulfid 97.4 0.0054 1.9E-07 41.6 11.8 93 58-152 30-147 (152)
118 1zzo_A RV1677; thioredoxin fol 97.3 0.0041 1.4E-07 41.0 10.7 88 57-148 24-135 (136)
119 3or5_A Thiol:disulfide interch 97.3 0.0065 2.2E-07 41.7 12.0 93 57-151 33-154 (165)
120 3raz_A Thioredoxin-related pro 97.3 0.0074 2.5E-07 41.1 12.2 96 57-152 23-144 (151)
121 1lu4_A Soluble secreted antige 97.3 0.0058 2E-07 40.4 11.1 87 57-147 23-135 (136)
122 2f9s_A Thiol-disulfide oxidore 97.2 0.0036 1.2E-07 42.6 9.5 93 57-151 25-141 (151)
123 3erw_A Sporulation thiol-disul 97.2 0.0029 1E-07 42.3 8.6 86 57-144 33-145 (145)
124 2lst_A Thioredoxin; structural 96.2 7.5E-05 2.6E-09 50.1 0.0 98 51-150 12-118 (130)
125 3evi_A Phosducin-like protein 97.1 0.0041 1.4E-07 41.7 8.7 98 40-145 2-111 (118)
126 2hls_A Protein disulfide oxido 97.1 0.0032 1.1E-07 47.2 8.6 90 51-148 17-117 (243)
127 2l5o_A Putative thioredoxin; s 97.0 0.011 3.7E-07 40.1 10.6 94 57-152 27-145 (153)
128 4f9z_D Endoplasmic reticulum r 97.0 0.0026 8.9E-08 47.0 7.7 95 44-147 12-111 (227)
129 1a8l_A Protein disulfide oxido 97.0 0.0037 1.3E-07 45.6 8.2 96 50-148 11-113 (226)
130 3fkf_A Thiol-disulfide oxidore 96.9 0.019 6.5E-07 38.4 11.0 88 57-149 32-147 (148)
131 2dbc_A PDCL2, unnamed protein 96.9 0.008 2.7E-07 40.7 8.7 99 39-146 8-119 (135)
132 2ju5_A Thioredoxin disulfide i 96.9 0.0095 3.2E-07 41.2 9.2 90 57-149 46-153 (154)
133 2lrn_A Thiol:disulfide interch 96.9 0.028 9.5E-07 38.2 11.5 91 58-153 29-146 (152)
134 2ywm_A Glutaredoxin-like prote 96.9 0.011 3.7E-07 43.2 10.0 93 51-148 11-115 (229)
135 4evm_A Thioredoxin family prot 96.8 0.022 7.6E-07 37.2 10.2 88 57-146 21-137 (138)
136 3ia1_A THIO-disulfide isomeras 96.8 0.0088 3E-07 40.6 8.4 89 59-151 31-147 (154)
137 3gl3_A Putative thiol:disulfid 96.7 0.026 8.8E-07 38.1 10.3 93 58-152 28-146 (152)
138 3ha9_A Uncharacterized thiored 96.7 0.03 1E-06 38.5 10.8 88 57-149 36-165 (165)
139 3kcm_A Thioredoxin family prot 96.7 0.023 7.8E-07 38.4 9.9 96 57-154 27-149 (154)
140 3iv4_A Putative oxidoreductase 96.6 0.0035 1.2E-07 42.0 5.1 94 44-143 9-111 (112)
141 3lwa_A Secreted thiol-disulfid 96.5 0.029 1E-06 39.3 9.8 92 58-149 59-182 (183)
142 3lor_A Thiol-disulfide isomera 96.3 0.063 2.2E-06 36.4 10.4 91 58-150 30-157 (160)
143 2trc_P Phosducin, MEKA, PP33; 96.3 0.0072 2.5E-07 44.7 5.8 99 40-146 98-211 (217)
144 3qcp_A QSOX from trypanosoma b 96.3 0.051 1.7E-06 44.9 11.1 106 41-150 23-154 (470)
145 2h30_A Thioredoxin, peptide me 96.2 0.011 3.6E-07 40.6 6.1 106 41-148 21-156 (164)
146 3f9u_A Putative exported cytoc 96.2 0.036 1.2E-06 38.5 8.9 99 46-148 31-166 (172)
147 2ywi_A Hypothetical conserved 96.2 0.074 2.5E-06 37.5 10.5 89 61-151 49-177 (196)
148 3q6o_A Sulfhydryl oxidase 1; p 96.2 0.1 3.5E-06 38.5 11.5 115 22-147 110-239 (244)
149 1a0r_P Phosducin, MEKA, PP33; 96.1 0.033 1.1E-06 42.0 8.6 99 40-146 111-224 (245)
150 3hcz_A Possible thiol-disulfid 96.0 0.09 3.1E-06 34.9 9.8 85 57-146 30-141 (148)
151 3fw2_A Thiol-disulfide oxidore 95.9 0.21 7.1E-06 33.6 11.5 86 58-148 33-148 (150)
152 1sen_A Thioredoxin-like protei 95.8 0.011 3.8E-07 41.4 4.6 96 51-148 39-148 (164)
153 1kng_A Thiol:disulfide interch 95.7 0.076 2.6E-06 35.8 8.5 87 58-148 42-152 (156)
154 2cvb_A Probable thiol-disulfid 95.7 0.11 3.8E-06 36.5 9.5 93 58-152 33-163 (188)
155 1jfu_A Thiol:disulfide interch 95.5 0.19 6.6E-06 35.0 10.3 94 58-151 60-183 (186)
156 3u5r_E Uncharacterized protein 95.4 0.28 9.5E-06 35.6 11.0 93 58-152 58-191 (218)
157 2dlx_A UBX domain-containing p 95.4 0.051 1.7E-06 38.0 6.6 67 79-148 69-136 (153)
158 3t58_A Sulfhydryl oxidase 1; o 95.3 0.27 9.3E-06 40.9 11.9 94 21-123 108-215 (519)
159 3eyt_A Uncharacterized protein 95.2 0.21 7.2E-06 33.7 9.3 91 58-150 28-154 (158)
160 3hdc_A Thioredoxin family prot 95.2 0.35 1.2E-05 32.7 10.4 86 57-144 40-148 (158)
161 1ilo_A Conserved hypothetical 94.8 0.18 6.1E-06 29.7 7.2 57 74-143 18-76 (77)
162 2b1k_A Thiol:disulfide interch 94.7 0.16 5.3E-06 34.8 7.6 87 57-148 50-160 (168)
163 2hyx_A Protein DIPZ; thioredox 94.0 0.4 1.4E-05 37.9 9.4 89 58-148 82-199 (352)
164 2ggt_A SCO1 protein homolog, m 94.0 0.53 1.8E-05 31.8 9.0 89 58-148 23-161 (164)
165 2bmx_A Alkyl hydroperoxidase C 93.6 0.69 2.4E-05 32.6 9.3 97 58-154 45-176 (195)
166 3ewl_A Uncharacterized conserv 93.5 0.48 1.6E-05 31.2 8.0 85 58-147 27-140 (142)
167 2lrt_A Uncharacterized protein 93.3 1.2 4E-05 30.0 9.9 88 58-150 35-147 (152)
168 2rli_A SCO2 protein homolog, m 92.9 1.4 4.9E-05 29.8 9.9 91 58-148 26-164 (171)
169 2v1m_A Glutathione peroxidase; 92.0 1.4 4.9E-05 29.7 8.9 37 114-150 133-169 (169)
170 3kh7_A Thiol:disulfide interch 91.6 0.69 2.4E-05 32.1 7.0 45 102-148 123-167 (176)
171 3s9f_A Tryparedoxin; thioredox 91.4 2 6.7E-05 29.4 9.1 64 58-123 48-138 (165)
172 1hyu_A AHPF, alkyl hydroperoxi 91.3 2.8 9.7E-05 34.4 11.4 113 21-145 77-197 (521)
173 3dwv_A Glutathione peroxidase- 91.3 1.8 6.2E-05 30.2 9.0 35 116-150 151-185 (187)
174 2vup_A Glutathione peroxidase- 91.2 2.8 9.5E-05 29.3 10.3 93 57-149 47-186 (190)
175 2p5q_A Glutathione peroxidase 91.0 2.5 8.4E-05 28.5 9.6 92 58-149 32-169 (170)
176 1i5g_A Tryparedoxin II; electr 90.8 2.2 7.6E-05 28.0 8.7 64 58-123 28-119 (144)
177 1o8x_A Tryparedoxin, TRYX, TXN 90.7 2.5 8.5E-05 27.9 9.1 64 58-123 28-119 (146)
178 1o73_A Tryparedoxin; electron 90.5 2.5 8.5E-05 27.6 9.1 64 58-123 28-119 (144)
179 4fo5_A Thioredoxin-like protei 90.3 1.8 6.1E-05 28.5 7.9 83 58-145 32-142 (143)
180 3eur_A Uncharacterized protein 90.0 2.8 9.7E-05 27.4 8.8 82 58-144 31-141 (142)
181 2k6v_A Putative cytochrome C o 89.8 1.3 4.3E-05 30.0 6.9 88 58-146 35-171 (172)
182 3dml_A Putative uncharacterize 89.4 0.4 1.4E-05 31.9 3.8 58 88-148 53-110 (116)
183 1zof_A Alkyl hydroperoxide-red 88.7 1.4 5E-05 31.0 6.7 96 58-153 33-170 (198)
184 2fgx_A Putative thioredoxin; N 88.6 0.77 2.6E-05 30.0 4.7 72 62-143 32-106 (107)
185 1we0_A Alkyl hydroperoxide red 88.5 2.4 8.1E-05 29.5 7.7 91 58-148 31-157 (187)
186 1ttz_A Conserved hypothetical 87.8 2.4 8.3E-05 26.2 6.6 50 90-149 29-78 (87)
187 1z6n_A Hypothetical protein PA 87.6 1.2 3.9E-05 31.3 5.5 88 60-150 56-149 (167)
188 3drn_A Peroxiredoxin, bacterio 87.3 5 0.00017 27.0 9.4 87 61-147 32-148 (161)
189 3cmi_A Peroxiredoxin HYR1; thi 87.2 5.2 0.00018 27.1 9.3 33 116-148 136-168 (171)
190 2obi_A PHGPX, GPX-4, phospholi 85.9 2.5 8.5E-05 29.2 6.5 32 114-145 150-181 (183)
191 1xzo_A BSSCO, hypothetical pro 85.7 6.2 0.00021 26.5 8.4 38 113-150 135-174 (174)
192 2ls5_A Uncharacterized protein 85.7 0.16 5.5E-06 34.4 0.0 50 103-153 104-153 (159)
193 2p31_A CL683, glutathione pero 85.3 3.6 0.00012 28.4 7.1 90 58-147 49-180 (181)
194 3ira_A Conserved protein; meth 84.5 1.8 6E-05 30.7 5.2 72 48-123 29-114 (173)
195 3ph9_A Anterior gradient prote 83.8 3.5 0.00012 28.3 6.4 56 87-147 79-141 (151)
196 3kp8_A Vkorc1/thioredoxin doma 83.6 2.6 8.9E-05 26.9 5.3 71 62-144 16-91 (106)
197 1un2_A DSBA, thiol-disulfide i 81.9 0.36 1.2E-05 34.8 0.6 41 101-148 40-81 (197)
198 3kij_A Probable glutathione pe 80.6 11 0.00039 25.7 9.1 38 58-95 38-79 (180)
199 2gs3_A PHGPX, GPX-4, phospholi 80.4 7.6 0.00026 26.8 7.3 33 114-146 152-184 (185)
200 1xvw_A Hypothetical protein RV 77.7 13 0.00043 24.6 7.5 87 60-146 38-158 (160)
201 1wjk_A C330018D20RIK protein; 75.5 6.6 0.00022 24.6 5.2 55 86-148 42-96 (100)
202 1uul_A Tryparedoxin peroxidase 74.8 19 0.00064 25.1 8.4 90 58-147 36-164 (202)
203 1zye_A Thioredoxin-dependent p 73.5 20 0.00069 25.6 8.0 91 58-148 56-185 (220)
204 2ec4_A FAS-associated factor 1 72.8 22 0.00074 25.0 9.6 36 112-147 129-167 (178)
205 2h01_A 2-Cys peroxiredoxin; th 70.4 23 0.00079 24.3 8.1 90 58-147 31-158 (192)
206 2b7k_A SCO1 protein; metalloch 70.4 9.9 0.00034 26.7 5.7 35 115-149 146-180 (200)
207 1qmv_A Human thioredoxin perox 70.0 24 0.00083 24.4 7.9 90 58-147 34-162 (197)
208 2k8s_A Thioredoxin; dimer, str 67.3 6.7 0.00023 23.0 3.7 43 74-119 19-61 (80)
209 2f8a_A Glutathione peroxidase 66.5 31 0.0011 24.3 9.7 34 115-148 174-207 (208)
210 3gha_A Disulfide bond formatio 63.2 10 0.00034 27.0 4.5 44 103-154 155-198 (202)
211 2i81_A 2-Cys peroxiredoxin; st 60.3 42 0.0014 23.7 9.2 90 58-147 52-179 (213)
212 2lus_A Thioredoxion; CR-Trp16, 63.6 2 6.7E-05 28.0 0.0 20 102-123 99-118 (143)
213 2jsy_A Probable thiol peroxida 52.0 48 0.0017 21.8 10.5 89 58-147 44-166 (167)
214 1ego_A Glutaredoxin; electron 51.8 32 0.0011 19.8 5.2 65 72-146 15-82 (85)
215 3gyk_A 27KDA outer membrane pr 46.1 63 0.0022 21.5 8.1 38 103-148 136-173 (175)
216 3kp9_A Vkorc1/thioredoxin doma 42.7 34 0.0012 26.1 4.7 59 74-144 216-276 (291)
217 3me7_A Putative uncharacterize 36.6 94 0.0032 20.7 9.0 35 114-148 127-162 (170)
218 3ztl_A Thioredoxin peroxidase; 34.5 1.2E+02 0.0041 21.3 8.3 91 57-147 68-197 (222)
219 3a2v_A Probable peroxiredoxin; 30.8 1.6E+02 0.0054 21.6 8.0 47 102-148 107-162 (249)
220 1v58_A Thiol:disulfide interch 30.4 39 0.0013 24.5 3.1 45 102-149 190-234 (241)
221 1fme_A FSD-EY peptide; beta-BE 29.3 32 0.0011 16.1 1.6 13 135-147 14-26 (28)
222 3p7x_A Probable thiol peroxida 29.2 1.2E+02 0.0042 19.9 9.6 43 102-144 113-164 (166)
223 2a2p_A Selenoprotein M, SELM p 24.1 98 0.0033 20.7 3.9 32 114-145 56-88 (129)
224 1t3b_A Thiol:disulfide interch 23.9 54 0.0019 23.1 2.8 39 101-146 171-209 (211)
225 1xvq_A Thiol peroxidase; thior 23.8 1.6E+02 0.0056 19.5 7.7 88 58-147 44-164 (175)
226 2lqo_A Putative glutaredoxin R 23.0 1.4E+02 0.0046 18.2 4.6 55 87-147 28-83 (92)
227 2rqw_B 24-meric peptide from s 21.6 22 0.00076 16.9 0.2 10 4-13 2-11 (26)
228 3r8n_P 30S ribosomal protein S 20.8 68 0.0023 19.7 2.4 39 4-42 26-68 (82)
229 1eej_A Thiol:disulfide interch 20.6 58 0.002 23.0 2.4 40 101-147 171-210 (216)
230 4hhu_A OR280; engineered prote 20.2 2E+02 0.0068 19.1 5.2 40 53-92 76-119 (170)
231 3bci_A Disulfide bond protein 20.1 1.4E+02 0.0047 20.1 4.3 42 102-151 140-181 (186)
232 1xg8_A Hypothetical protein SA 20.0 1.9E+02 0.0064 18.7 5.9 69 75-148 32-109 (111)
No 1
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=99.93 E-value=1.4e-25 Score=160.04 Aligned_cols=121 Identities=26% Similarity=0.479 Sum_probs=98.8
Q ss_pred HHHhCCCCCeEecCCCchhhhhcCCCceEEE-EeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCC
Q 031686 34 FISLNKIPPMITYSRETTPLILNSPLKLLWL-FAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGV 109 (155)
Q Consensus 34 fI~~~~~P~v~e~~~~~~~~i~~~~~~~v~l-f~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl 109 (155)
-++.+++|+|+++|.+|+.+|++++.+.+++ |...+ +.+. ++.++++|++|+++++|+++|++...+.+.+++||+
T Consensus 7 ~~~~~~~PLV~e~t~en~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkgki~Fv~vd~~~~~~~~~l~~fGl 86 (147)
T 3bj5_A 7 HMKHNQLPLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFAFIDSDHTDNQRILEFFGL 86 (147)
T ss_dssp --------CEEECCTTTHHHHHSSSCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTTTCEEEEECTTCGGGHHHHHHTTC
T ss_pred chhhccCCeeEEeccccHHHHhcCCCceEEEEEecCCcHhHHHHHHHHHHHHHHcCCceEEEEEecchHhHHHHHHHcCC
Confidence 4678999999999999999999999998544 55433 3567 899999999999999999999954347789999999
Q ss_pred CCCCcceEEEEec-CCCeeecCC-CCCCHHHHHHHHHHHHcCCCccC
Q 031686 110 TCYTSRVIAVASI-RKRKKYVLN-GELTLSNVKSFALDFLGDKLRNQ 154 (155)
Q Consensus 110 ~~~~~P~v~i~~~-~~~~kY~~~-~~~t~~~I~~Fi~~f~~Gkl~p~ 154 (155)
+++++|+++|++. ..++||.++ +++|.++|++|+++|++|||+||
T Consensus 87 ~~~~~P~v~i~~~~~~~~Ky~~~~~~~t~~~i~~Fv~d~l~GkL~p~ 133 (147)
T 3bj5_A 87 KKEECPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIKPH 133 (147)
T ss_dssp CGGGCSEEEEEECSSSCEEECCSCCCCCHHHHHHHHHHHHTTCSCEE
T ss_pred CcccCCEEEEEecccccccCCCCcccCCHHHHHHHHHHHHcCCcccc
Confidence 9888999999987 556799886 68999999999999999999997
No 2
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.92 E-value=3.7e-24 Score=161.76 Aligned_cols=131 Identities=22% Similarity=0.355 Sum_probs=114.7
Q ss_pred EeccC----CcCHHHHHHHHHhCCCCCeEecCCCchhhhhcCCCce-EEEEeecC--ChhH-HHHHHHHHHhhcCceEEE
Q 031686 20 IFSDV----SFTISVIDDFISLNKIPPMITYSRETTPLILNSPLKL-LWLFAAVH--DSEA-KSIFQETARAFKGKLLFV 91 (155)
Q Consensus 20 ~~y~g----~~~~~~l~~fI~~~~~P~v~e~~~~~~~~i~~~~~~~-v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~ 91 (155)
..|+| +++.++|.+||+.+++|+|+++|++|+..+++.+.|. +++|.+.. +.+. .+.++++|+++++++.|+
T Consensus 88 ~~~~~~~~g~~~~~~l~~fi~~~~~plv~e~t~~n~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~~i~F~ 167 (227)
T 4f9z_D 88 LNLEDEDIESIDATKLSRFIEINSLHMVTEYNPVTVIGLFNSVIQIHLLLIMNKASPEYEENMHRYQKAAKLFQGKILFI 167 (227)
T ss_dssp EEECHHHHHTCCHHHHHHHHHHHCCCSEEECCHHHHHHHHHSSCCEEEEEEECTTSTTHHHHHHHHHHHHHHTTTTCEEE
T ss_pred ccccccccCCCCHHHHHHHHHHhCCCceeecCcccHHHHhccCCceEEEEEEcCCcchHHHHHHHHHHHHHHhhCCEEEE
Confidence 56774 7999999999999999999999999999999999888 45565643 4566 899999999999999999
Q ss_pred EEeCCCcchhhhhhhhCCCCCCcceEEEEecCCCeeecCC-CCCCHHHHHHHHHHHHcCC
Q 031686 92 YSQIYPKLKGQIFDYFGVTCYTSRVIAVASIRKRKKYVLN-GELTLSNVKSFALDFLGDK 150 (155)
Q Consensus 92 ~vd~~~~~~~~~~~~~gl~~~~~P~v~i~~~~~~~kY~~~-~~~t~~~I~~Fi~~f~~Gk 150 (155)
|+|++...+.+++++||+++.++|+++|++...+.+|.++ +++|.++|.+|+++|++||
T Consensus 168 ~vd~~~~~~~~~l~~fgl~~~~~P~~~i~~~~~~~ky~~~~~~~t~~~i~~Fv~~~~~Gk 227 (227)
T 4f9z_D 168 LVDSGMKENGKVISFFKLKESQLPALAIYQTLDDEWDTLPTAEVSVEHVQNFCDGFLSGK 227 (227)
T ss_dssp EEETTSGGGHHHHHHTTCCGGGCSEEEEEESSSCCEEEETTCCCCHHHHHHHHHHHHTTC
T ss_pred EeCCccHhHHHHHHHcCCCcccCCEEEEEECCCCccccCCcCCCCHHHHHHHHHHHhCCC
Confidence 9999854477899999998778999999998766678776 6899999999999999997
No 3
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=99.91 E-value=1.2e-23 Score=161.20 Aligned_cols=130 Identities=16% Similarity=0.219 Sum_probs=110.5
Q ss_pred Eecc--CCcCHHHHHHHHHhCCCCCeEecCCCchhhhhcCCCceEEEEeecC-------ChhH-HHHHHHHHHhhcCceE
Q 031686 20 IFSD--VSFTISVIDDFISLNKIPPMITYSRETTPLILNSPLKLLWLFAAVH-------DSEA-KSIFQETARAFKGKLL 89 (155)
Q Consensus 20 ~~y~--g~~~~~~l~~fI~~~~~P~v~e~~~~~~~~i~~~~~~~v~lf~~~~-------~~~~-~~~~~~vA~~~~~~i~ 89 (155)
..|+ |+++.++|.+||+.+++|+|+++|.+|+..++. +.|++++|...+ +.+. ++.++++|++|| +++
T Consensus 93 ~~y~g~~~~~~~~l~~fi~~~~~Plv~e~t~~n~~~~~~-~~~l~~~~~~~d~~~~~~~~~~~~~~~~~~vAk~~k-ki~ 170 (250)
T 3ec3_A 93 HVMDVQGSTEASAIKDYVVKHALPLVGHRKTSNDAKRYS-KRPLVVVYYSVDFSFDYRTATQFWRNKVLEVAKDFP-EYT 170 (250)
T ss_dssp EEEECCTTSCHHHHHHHHHHHSSCTEEEECTTTHHHHSC-SSSEEEEEECCCCSTTTHHHHHHHHHHHHHHHTTCT-TSE
T ss_pred eeccCCCCCCHHHHHHHHHHcCCCceeecCccchhhhhc-cCccEEEEEecccccccchhHHHHHHHHHHHHHhhc-cee
Confidence 4677 579999999999999999999999999999985 678876776421 2355 789999999999 999
Q ss_pred EEEEeCCCcchhhhhhhhCCCCCCc-ceEEEEecCCCeeecCC-CCCCHHHHHHHHHHHHcCCCccC
Q 031686 90 FVYSQIYPKLKGQIFDYFGVTCYTS-RVIAVASIRKRKKYVLN-GELTLSNVKSFALDFLGDKLRNQ 154 (155)
Q Consensus 90 F~~vd~~~~~~~~~~~~~gl~~~~~-P~v~i~~~~~~~kY~~~-~~~t~~~I~~Fi~~f~~Gkl~p~ 154 (155)
|+|+|++. +.+.+++||+++... |.+++++ ..+.||.++ +++|.++|.+|+++|++||++|+
T Consensus 171 F~~~d~~~--~~~~l~~fgl~~~~~~p~~~~~~-~~~~ky~~~~~~~t~~~i~~Fv~~~~~Gkl~p~ 234 (250)
T 3ec3_A 171 FAIADEED--YATEVKDLGLSESGGDVNAAILD-ESGKKFAMEPEEFDSDALREFVMAFKKGKLKPV 234 (250)
T ss_dssp EEEEETTT--THHHHHHTTCSSCSCSCEEEEEC-TTSCEEECCCCSCCHHHHHHHHHHHHTTCCCCC
T ss_pred EEEEcHHH--HHHHHHHcCCCccCCCcEEEEEc-CCCceecCCcccCCHHHHHHHHHHHHCCCccce
Confidence 99999986 678899999986544 5787777 446799987 68999999999999999999997
No 4
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=99.91 E-value=6.4e-24 Score=162.79 Aligned_cols=131 Identities=21% Similarity=0.283 Sum_probs=111.8
Q ss_pred EEec-cCCcCHHHHHHHHHhCCCCCeEecCCCchhhhhcCCCceEEEEeec--CC----hhH-HHHHHHHHHhhcCc---
Q 031686 19 FIFS-DVSFTISVIDDFISLNKIPPMITYSRETTPLILNSPLKLLWLFAAV--HD----SEA-KSIFQETARAFKGK--- 87 (155)
Q Consensus 19 ~~~y-~g~~~~~~l~~fI~~~~~P~v~e~~~~~~~~i~~~~~~~v~lf~~~--~~----~~~-~~~~~~vA~~~~~~--- 87 (155)
.+.| +|+++.++|.+||..+++|+|+++|.+|+..+++. |++++|+.. .. .+. ++.++++|++++++
T Consensus 91 ~~~y~~g~~~~~~l~~fi~~~~~Plv~e~t~~n~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k~~~ 168 (252)
T 2h8l_A 91 TVAYTEQKMTSGKIKKFIQENIFGICPHMTEDNKDLIQGK--DLLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHK 168 (252)
T ss_dssp EEECCCSSCCHHHHHHHHHHHSSCSSCEECTTTHHHHSSS--SEEEEEECCBTTTBHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred ccccCCCCcCHHHHHHHHHhcccCCeeecccccHhhhcCC--CeEEEEeecchhhcchhHHHHHHHHHHHHHHccccCce
Confidence 4678 99999999999999999999999999999998655 454455432 21 335 78899999999987
Q ss_pred eEEEEEeCCCcchhhhhhhhCC--CCCCcceEEEEecCCCeeecCCCCCCHHH--HHHHHHHHHcCCCccC
Q 031686 88 LLFVYSQIYPKLKGQIFDYFGV--TCYTSRVIAVASIRKRKKYVLNGELTLSN--VKSFALDFLGDKLRNQ 154 (155)
Q Consensus 88 i~F~~vd~~~~~~~~~~~~~gl--~~~~~P~v~i~~~~~~~kY~~~~~~t~~~--I~~Fi~~f~~Gkl~p~ 154 (155)
+.|+|+|++. +.+++++||+ +..++|+++|++. .+.+|.+++++|.++ |.+|+++|++|+++|+
T Consensus 169 ~~F~~~d~~~--~~~~~~~fgl~~~~~~~P~v~i~~~-~~~ky~~~~~~t~~~~~i~~F~~~~~~Gkl~~~ 236 (252)
T 2h8l_A 169 LNFAVASRKT--FSHELSDFGLESTAGEIPVVAIRTA-KGEKFVMQEEFSRDGKALERFLQDYFDGNLKRY 236 (252)
T ss_dssp CEEEEEETTT--THHHHGGGTCCCCSCSSCEEEEECT-TSCEEECCSCCCTTSHHHHHHHHHHHHTCSCCC
T ss_pred EEEEEEchHH--HHHHHHHcCCCCccCCCCEEEEEeC-cCcEecCCcccCcchHHHHHHHHHHHCCCcccc
Confidence 9999999986 6789999999 5578999999986 467998888899998 9999999999999997
No 5
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.85 E-value=1.7e-20 Score=150.89 Aligned_cols=132 Identities=11% Similarity=0.097 Sum_probs=110.5
Q ss_pred EeccCC-cCHHHHHHHHHhCCCCCeEecCCCchhhhhcCC--CceEEEEeecCC--hhH-HHHHHHHHHhhcC--ceEEE
Q 031686 20 IFSDVS-FTISVIDDFISLNKIPPMITYSRETTPLILNSP--LKLLWLFAAVHD--SEA-KSIFQETARAFKG--KLLFV 91 (155)
Q Consensus 20 ~~y~g~-~~~~~l~~fI~~~~~P~v~e~~~~~~~~i~~~~--~~~v~lf~~~~~--~~~-~~~~~~vA~~~~~--~i~F~ 91 (155)
..|+|. ++.++|.+||..+++|+|+++|++|+.+++.++ .+.+++|++.++ .+. .+.|+++|++|++ ++.|+
T Consensus 206 ~~y~g~~~~~~~l~~fi~~~~~p~v~elt~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~l~~vA~~~~~~~ki~F~ 285 (367)
T 3us3_A 206 VTIPDKPNSEEEIVNFVEEHRRSTLRKLKPESMYETWEDDMDGIHIVAFAEEADPDGYEFLEILKSVAQDNTDNPDLSII 285 (367)
T ss_dssp EECSSSSCCHHHHHHHHHHTCSCSEEECCGGGHHHHHHSCBTTEEEEEECCTTSHHHHHHHHHHHHHHHHTTTCTTCCEE
T ss_pred eecCCCCCCHHHHHHHHHHcCccceeecChhhHHHHHhhccCCcEEEEEEcCCChhHHHHHHHHHHHHHHcCCCCceEEE
Confidence 578884 899999999999999999999999998888864 245777887543 456 8889999999998 79999
Q ss_pred EEeCCCcchhhhhh----hhCCCCCCcceEEEEecCCC--eeecCCC---CCCHHHHHHHHHHHHcCCCccC
Q 031686 92 YSQIYPKLKGQIFD----YFGVTCYTSRVIAVASIRKR--KKYVLNG---ELTLSNVKSFALDFLGDKLRNQ 154 (155)
Q Consensus 92 ~vd~~~~~~~~~~~----~~gl~~~~~P~v~i~~~~~~--~kY~~~~---~~t~~~I~~Fi~~f~~Gkl~p~ 154 (155)
|+|.+. +.+.++ .||++ .++|+++|++..++ ++|.+++ ++|.++|.+|+++|++||++|.
T Consensus 286 ~id~~~--~~~~l~~~~~~fgl~-~~~P~~~i~~~~~~~~~~y~~~~~~~~~t~~~i~~F~~~~~~Gkl~p~ 354 (367)
T 3us3_A 286 WIDPDD--FPLLVPYWEKTFDID-LSAPQIGVVNVTDADSVWMEMDDEEDLPSAEELEDWLEDVLEGEINTE 354 (367)
T ss_dssp EECGGG--CTTTHHHHHHHHTCC-TTSCEEEEEETTTCCEEECCCCTTSCCCCHHHHHHHHHHHHHTSSCC-
T ss_pred EECCcc--chhHHHHHHHhcCCC-CCCCeEEEEecccccceeecCCcccccCCHHHHHHHHHHHHcCCcCcc
Confidence 999996 555554 59998 46999999998655 4777764 6999999999999999999985
No 6
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.83 E-value=1.6e-19 Score=143.99 Aligned_cols=135 Identities=26% Similarity=0.455 Sum_probs=117.2
Q ss_pred EeccCCcCHHHHHHHHHhCCCCCeEecCCCchhhhhcCCCce-EEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeC
Q 031686 20 IFSDVSFTISVIDDFISLNKIPPMITYSRETTPLILNSPLKL-LWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQI 95 (155)
Q Consensus 20 ~~y~g~~~~~~l~~fI~~~~~P~v~e~~~~~~~~i~~~~~~~-v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~ 95 (155)
..|+|+++.++|.+||+.+..|+|.+++++++.+++..+.+. +++|+... +... ...++++|+++++++.|+++|.
T Consensus 96 ~~~~g~~~~~~i~~fi~~~~~p~v~~~~~~~~~~~~~~~~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~i~f~~vd~ 175 (361)
T 3uem_A 96 NNFEGEVTKENLLDFIKHNQLPLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFIFIDS 175 (361)
T ss_dssp EECCSCCCHHHHHHHHHHHSSCSEEECSTTTHHHHHSCSCCEEEEEECCSSSSSHHHHHHHHHHHHGGGTTTCEEEEECT
T ss_pred cccCCcCCHHHHHHHHHHcCCCcceecCcccHHHHhcCCCCcEEEEEEeCCchhHHHHHHHHHHHHHHccCceEEEEecC
Confidence 467899999999999999999999999999999999988776 66777653 4567 8899999999999999999999
Q ss_pred CCcchhhhhhhhCCCCCCcceEEEEec-CCCeeecCC-CCCCHHHHHHHHHHHHcCCCccC
Q 031686 96 YPKLKGQIFDYFGVTCYTSRVIAVASI-RKRKKYVLN-GELTLSNVKSFALDFLGDKLRNQ 154 (155)
Q Consensus 96 ~~~~~~~~~~~~gl~~~~~P~v~i~~~-~~~~kY~~~-~~~t~~~I~~Fi~~f~~Gkl~p~ 154 (155)
+...+.+++++||++..++|++++++. ....+|.++ +.++.++|.+|++++++|+++|+
T Consensus 176 ~~~~~~~~~~~fgi~~~~~P~~~~~~~~~~~~ky~~~~~~~~~~~l~~fi~~~l~g~~~~~ 236 (361)
T 3uem_A 176 DHTDNQRILEFFGLKKEECPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIKPH 236 (361)
T ss_dssp TSGGGHHHHHHTTCCTTTCSEEEEEECC--CCEECCSSCCCCHHHHHHHHHHHHTTCSCCC
T ss_pred ChHHHHHHHHHcCCCccCCccEEEEEcCCcccccCCCccccCHHHHHHHHHHHhcCCCccc
Confidence 843378999999999778999999987 334688876 58999999999999999999885
No 7
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.83 E-value=5.6e-20 Score=128.12 Aligned_cols=116 Identities=18% Similarity=0.264 Sum_probs=101.5
Q ss_pred CCCCCeEecCCCchhhhhcCCCceEEEEeec-CChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCcc
Q 031686 38 NKIPPMITYSRETTPLILNSPLKLLWLFAAV-HDSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTSR 115 (155)
Q Consensus 38 ~~~P~v~e~~~~~~~~i~~~~~~~v~lf~~~-~~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~P 115 (155)
.++|+|.++|.+|+.++++++.|+++.|... ..... ...|.++|++|++++.|+++|.+. +.++++.||+..+++|
T Consensus 3 c~~plv~~~t~~~f~~~~~~~~pv~v~f~a~~~~c~~~~p~l~~~A~~~~gk~~f~~vd~d~--~~~~a~~~gi~~~~iP 80 (133)
T 2djk_A 3 LGSPLIGEIGPETYSDYMSAGIPLAYIFAETAEERKELSDKLKPIAEAQRGVINFGTIDAKA--FGAHAGNLNLKTDKFP 80 (133)
T ss_dssp CSCCCSEECCHHHHHHHHHTTSCEEEEECSCSSSHHHHHHHHHHHHHSSTTTSEEEEECTTT--TGGGTTTTTCCSSSSS
T ss_pred cccCceeccChHHHHHHhcCCCCEEEEEecChhhHHHHHHHHHHHHHHhCCeEEEEEEchHH--hHHHHHHcCCCcccCC
Confidence 5789999999999999998888888777755 33455 789999999999999999999996 6789999999987899
Q ss_pred eEEEEecCCCeeecCC--CCCCHHHHHHHHHHHHcCCCccCC
Q 031686 116 VIAVASIRKRKKYVLN--GELTLSNVKSFALDFLGDKLRNQK 155 (155)
Q Consensus 116 ~v~i~~~~~~~kY~~~--~~~t~~~I~~Fi~~f~~Gkl~p~~ 155 (155)
++++++..++++|.+. |.++.++|++|++++++|+|+||.
T Consensus 81 tl~i~~~~~g~~~~~~~~g~~~~~~l~~fi~~~l~Gkl~p~~ 122 (133)
T 2djk_A 81 AFAIQEVAKNQKFPFDQEKEITFEAIKAFVDDFVAGKIEPSI 122 (133)
T ss_dssp EEEEECTTTCCBCCCCSSSCCCHHHHHHHHHHHHHTCCCCSS
T ss_pred EEEEEecCcCcccCCCCccccCHHHHHHHHHHHHcCCcCccc
Confidence 9999986446788875 889999999999999999999983
No 8
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.81 E-value=1.1e-19 Score=146.69 Aligned_cols=131 Identities=21% Similarity=0.217 Sum_probs=111.4
Q ss_pred EeccCCc-CHHHHHHHHHhCCCCCeEecCCCchhhhhcCCCceEEEEeecCC---hhH-HHHHHHHHHhhcCceEEEEEe
Q 031686 20 IFSDVSF-TISVIDDFISLNKIPPMITYSRETTPLILNSPLKLLWLFAAVHD---SEA-KSIFQETARAFKGKLLFVYSQ 94 (155)
Q Consensus 20 ~~y~g~~-~~~~l~~fI~~~~~P~v~e~~~~~~~~i~~~~~~~v~lf~~~~~---~~~-~~~~~~vA~~~~~~i~F~~vd 94 (155)
..|+|++ +.++|.+||..+++|+|.++|.+|+..++..+.+++++|+..++ .+. .+.+.++|.++++++.|+|+|
T Consensus 197 ~~y~g~~~~~~~l~~fi~~~~~p~v~elt~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~id 276 (382)
T 2r2j_A 197 MVYLGAMTNFDVTYNWIQDKCVPLVREITFENGEELTEEGLPFLILFHMKEDTESLEIFQNEVARQLISEKGTINFLHAD 276 (382)
T ss_dssp EECCSCTTCHHHHHHHHHHHHSCSSEECCHHHHHHHHTTCCCEEEEEECTTCCHHHHHHHHHHHHHTGGGTTTSEEEEEE
T ss_pred cccCCCCCCHHHHHHHHHhcccCceEecChhhHHHHhcCCCcEEEEEecCCchHHHHHHHHHHHHHHHHhCCeeEEEEEc
Confidence 5688988 89999999999999999999999999999999888888887643 233 566677788899999999999
Q ss_pred CCCcchhhhhhhhCCCCCCcceEEEEecCCCeeecCC---CCCCHHHHHHHHHHHHcCCCccC
Q 031686 95 IYPKLKGQIFDYFGVTCYTSRVIAVASIRKRKKYVLN---GELTLSNVKSFALDFLGDKLRNQ 154 (155)
Q Consensus 95 ~~~~~~~~~~~~~gl~~~~~P~v~i~~~~~~~kY~~~---~~~t~~~I~~Fi~~f~~Gkl~p~ 154 (155)
++. +.+.+++||+++.++|+++|.+.. ..|.++ +.+++++|.+|+++|++|+|+|+
T Consensus 277 ~~~--~~~~~~~~gl~~~~~P~i~i~~~~--~~y~~~~~~~~~~~~~i~~F~~d~~~Gkl~p~ 335 (382)
T 2r2j_A 277 CDK--FRHPLLHIQKTPADCPVIAIDSFR--HMYVFGDFKDVLIPGKLKQFVFDLHSGKLHRE 335 (382)
T ss_dssp TTT--THHHHHHTTCCGGGCSEEEEECSS--CEEECCCSGGGGSTTHHHHHHHHHHHTTTSSC
T ss_pred hHH--hHHHHHHcCCCccCCCEEEEEcch--hcCCCCccccccCHHHHHHHHHHHHCCCcccc
Confidence 996 778899999998789999998753 335543 35688999999999999999997
No 9
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.81 E-value=6.8e-19 Score=140.37 Aligned_cols=130 Identities=16% Similarity=0.177 Sum_probs=108.3
Q ss_pred EeccCC-cCHHHHHHHHHhCCCCCeEecCCCchhhhhcCCC-ce-EEEEeecCC--hhH-HHHHHHHHHhhcC--ceEEE
Q 031686 20 IFSDVS-FTISVIDDFISLNKIPPMITYSRETTPLILNSPL-KL-LWLFAAVHD--SEA-KSIFQETARAFKG--KLLFV 91 (155)
Q Consensus 20 ~~y~g~-~~~~~l~~fI~~~~~P~v~e~~~~~~~~i~~~~~-~~-v~lf~~~~~--~~~-~~~~~~vA~~~~~--~i~F~ 91 (155)
..|+|+ ++.++|.+||..++.|+|+++|.+|+..+++++. +. +++|.+..+ ... .+.++++|+++++ ++.|+
T Consensus 204 ~~y~g~~~~~~~l~~fi~~~~~p~v~elt~~~~~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vA~~~~~~~~~~f~ 283 (350)
T 1sji_A 204 IAIPDKPYTEEELVEFVKEHQRPTLRRLRPEDMFETWEDDLNGIHIVAFAERSDPDGYEFLEILKQVARDNTDNPDLSIV 283 (350)
T ss_dssp EECSSSSCCHHHHHHHHHHHCCCSEEECCTTTHHHHHHSCSSSEEEEEECCTTSHHHHHHHHHHHHHHHHGGGCSSCCEE
T ss_pred eecCCCCCCHHHHHHHHHHcCccchhhcChhhHHHHhcCCCCCcEEEEEEcCCCccHHHHHHHHHHHHHHhCCCCceEEE
Confidence 578887 8999999999999999999999999999998865 55 555655433 356 8899999999987 89999
Q ss_pred EEeCCCcchhhhh----hhhCCCCCCcceEEEEecCCCeeec--CC---CCCCHHHHHHHHHHHHcCCCc
Q 031686 92 YSQIYPKLKGQIF----DYFGVTCYTSRVIAVASIRKRKKYV--LN---GELTLSNVKSFALDFLGDKLR 152 (155)
Q Consensus 92 ~vd~~~~~~~~~~----~~~gl~~~~~P~v~i~~~~~~~kY~--~~---~~~t~~~I~~Fi~~f~~Gkl~ 152 (155)
|+|.+. +.+.+ +.||++ .+.|+++|++.+++.+|. ++ +++|.++|.+|++++++|+|+
T Consensus 284 ~id~~~--~~~~~~~~~~~~gi~-~~~P~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~F~~d~~~Gkl~ 350 (350)
T 1sji_A 284 WIDPDD--FPLLVAYWEKTFKID-LFKPQIGVVNVTDADSVWMEIPDDDDLPTAEELEDWIEDVLSGKIN 350 (350)
T ss_dssp EECGGG--CHHHHHHHHHHCCSC-TTSCEEEEEESSSSCEEESCSSCCSCCCCHHHHHHHHHHHHTSCC-
T ss_pred EECchh--hHHHHHHHHhhcCCC-ccCCcEEEEecccccccccCCCcccccCCHHHHHHHHHHHhcCccC
Confidence 999986 56777 789998 468999999986555665 44 379999999999999999985
No 10
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.79 E-value=1.1e-18 Score=143.95 Aligned_cols=130 Identities=20% Similarity=0.273 Sum_probs=109.9
Q ss_pred Eecc-CCcCHHHHHHHHHhCCCCCeEecCCCchhhhhcCCCceEEEEeecC--C----hhH-HHHHHHHHHhhcCc---e
Q 031686 20 IFSD-VSFTISVIDDFISLNKIPPMITYSRETTPLILNSPLKLLWLFAAVH--D----SEA-KSIFQETARAFKGK---L 88 (155)
Q Consensus 20 ~~y~-g~~~~~~l~~fI~~~~~P~v~e~~~~~~~~i~~~~~~~v~lf~~~~--~----~~~-~~~~~~vA~~~~~~---i 88 (155)
..|+ |.++.++|.+||+.+++|+|+++|.+|+..+++.+ .+++|...+ . .+. ++.++++|++++++ +
T Consensus 196 ~~y~~~~~~~~~l~~fi~~~~~p~v~e~t~~n~~~~~~~~--~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k~~~i 273 (481)
T 3f8u_A 196 VAYTEQKMTSGKIKKFIQENIFGICPHMTEDNKDLIQGKD--LLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKL 273 (481)
T ss_dssp EECCCSSCCHHHHHHHHHHHTTTTSCEECTTTHHHHTTSS--EEEEEECCCTTTCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred cccCCCCCCHHHHHHHHHHhCCCCccccChhHHHHhcCCC--ceEEEEecccccchhhHHHHHHHHHHHHHHhcCCCceE
Confidence 5677 78999999999999999999999999999998654 544444332 1 233 57789999999988 9
Q ss_pred EEEEEeCCCcchhhhhhhhCCC--CCCcceEEEEecCCCeeecCCCCCCHH--HHHHHHHHHHcCCCccC
Q 031686 89 LFVYSQIYPKLKGQIFDYFGVT--CYTSRVIAVASIRKRKKYVLNGELTLS--NVKSFALDFLGDKLRNQ 154 (155)
Q Consensus 89 ~F~~vd~~~~~~~~~~~~~gl~--~~~~P~v~i~~~~~~~kY~~~~~~t~~--~I~~Fi~~f~~Gkl~p~ 154 (155)
.|+++|.+. +.+.+++||++ ..+.|+++|.+ ..+.+|.+++++|.+ +|.+|++++++|+++|+
T Consensus 274 ~F~~~D~~~--~~~~l~~~gl~~~~~~~P~~~i~~-~~~~ky~~~~~~t~e~~~l~~f~~~~~~g~~~~~ 340 (481)
T 3f8u_A 274 NFAVASRKT--FSHELSDFGLESTAGEIPVVAIRT-AKGEKFVMQEEFSRDGKALERFLQDYFDGNLKRY 340 (481)
T ss_dssp EEEEEETTT--THHHHGGGTCCCCTTCSCEEEEEC-SSSCEEECCSCCCTTSHHHHHHHHHHHHTCCCCC
T ss_pred EEEEEcHHH--HHHHHHHcCCCcccCCCcEEEEEc-CCCcccCCCcccCccHHHHHHHHHHHhcCCcccc
Confidence 999999886 78899999998 45799999998 446799988889999 99999999999999986
No 11
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.76 E-value=2.7e-18 Score=142.67 Aligned_cols=134 Identities=19% Similarity=0.232 Sum_probs=118.4
Q ss_pred EEEeccCC-c---CHHHHHHHHHhCCCCCeEecCCCchhhhhcCCCceEEEEeecC-ChhH-HHHHHHHHHhhcCceEEE
Q 031686 18 CFIFSDVS-F---TISVIDDFISLNKIPPMITYSRETTPLILNSPLKLLWLFAAVH-DSEA-KSIFQETARAFKGKLLFV 91 (155)
Q Consensus 18 ~~~~y~g~-~---~~~~l~~fI~~~~~P~v~e~~~~~~~~i~~~~~~~v~lf~~~~-~~~~-~~~~~~vA~~~~~~i~F~ 91 (155)
....|+|+ + +.++|.+||..+.+|+++++|.+|+..+++.+.+++++|.+.. +.+. .+.++++|+++++++.|+
T Consensus 194 ~~~~~~g~~~~~~~~~~l~~fi~~~~~p~v~~~t~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~a~~~~~~i~F~ 273 (504)
T 2b5e_A 194 EPVVYNGKKADIADADVFEKWLQVEALPYFGEIDGSVFAQYVESGLPLGYLFYNDEEELEEYKPLFTELAKKNRGLMNFV 273 (504)
T ss_dssp EEEECCSCHHHHTSHHHHHHHHHHHSSCSSCBCCHHHHHHHHHTTSCEEEEEESSHHHHHHHHHHHHHHHHHTTTTCEEE
T ss_pred cccccCCcccccCCHHHHHHHHHhcccCCcccCCHhHHHHHhcCCCcEEEEEecCcccHHHHHHHHHHHHHhcCCeeEEE
Confidence 45578898 7 9999999999999999999999999999999988877777653 2355 889999999999999999
Q ss_pred EEeCCCcchhhhhhhhCCCCCCcceEEEEecCCCeeecCC--CC-----------CCHHHHHHHHHHHHcCCCccC
Q 031686 92 YSQIYPKLKGQIFDYFGVTCYTSRVIAVASIRKRKKYVLN--GE-----------LTLSNVKSFALDFLGDKLRNQ 154 (155)
Q Consensus 92 ~vd~~~~~~~~~~~~~gl~~~~~P~v~i~~~~~~~kY~~~--~~-----------~t~~~I~~Fi~~f~~Gkl~p~ 154 (155)
|+|.+. +.+++++||+ +.+.|+++|++...+.+|.++ ++ ++.+.|.+|+.++..|++.|+
T Consensus 274 ~id~~~--~~~~~~~~gl-~~~~P~v~i~~~~~~~ky~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~~~~g~~~p~ 346 (504)
T 2b5e_A 274 SIDARK--FGRHAGNLNM-KEQFPLFAIHDMTEDLKYGLPQLSEEAFDELSDKIVLESKAIESLVKDFLKGDASPI 346 (504)
T ss_dssp EEEHHH--HTTHHHHTTC-CSCSSEEEEEETTTTEEEECCCCCHHHHHTCCSCCCCCHHHHHHHHHHHHHTCCCCC
T ss_pred EEehhh--hHHHHHHcCC-cccCCEEEEEeCCcCcccCCCCCccchhhccccccccCHHHHHHHHHHHHcCCCChh
Confidence 999885 7789999999 778999999998667789876 55 899999999999999999886
No 12
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.28 E-value=5.8e-11 Score=103.17 Aligned_cols=125 Identities=12% Similarity=0.061 Sum_probs=105.4
Q ss_pred EEeccCCcCHHHHHHHHHhCCCCCeEecCCCchhhhhcCCCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeC
Q 031686 19 FIFSDVSFTISVIDDFISLNKIPPMITYSRETTPLILNSPLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQI 95 (155)
Q Consensus 19 ~~~y~g~~~~~~l~~fI~~~~~P~v~e~~~~~~~~i~~~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~ 95 (155)
+..|+|+++.++|.+|+..+..|+|.++|.+++..+ .+.++++.|...- .-.. ...+.++|+++++++.|+.+|.
T Consensus 418 ~~~~~g~~~~~~i~~f~~~~~~~~v~~l~~~~~~~~--~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~~v~~~~vd~ 495 (780)
T 3apo_A 418 YEIHHGKKILYDILAFAKESVNSHVTTLGPQNFPAS--DKEPWLVDFFAPWSPPSRALLPELRKASTLLYGQLKVGTLDC 495 (780)
T ss_dssp EEECCSCCCHHHHHHHHHHHHTSCEEECCTTTSCTT--CCSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEET
T ss_pred eeecccHhhHHHHHHHhhhccCCCCEecCHHHHHHc--CCCeEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEeC
Confidence 566889999999999999999999999999999987 5556766676542 2345 7889999999999999999999
Q ss_pred CCcchhhhhhhhCCCCCCcceEEEEecCCCeeecCCCCCCHHHHHHHHHHHHcCCC
Q 031686 96 YPKLKGQIFDYFGVTCYTSRVIAVASIRKRKKYVLNGELTLSNVKSFALDFLGDKL 151 (155)
Q Consensus 96 ~~~~~~~~~~~~gl~~~~~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~~Gkl 151 (155)
+. ...+++.||++. +|++++++. +++|.+.|..+.++|.+|++++++..+
T Consensus 496 ~~--~~~~~~~~~v~~--~Pt~~~~~~--g~~~~~~g~~~~~~l~~fi~~~~~~~v 545 (780)
T 3apo_A 496 TI--HEGLCNMYNIQA--YPTTVVFNQ--SSIHEYEGHHSAEQILEFIEDLRNPSV 545 (780)
T ss_dssp TT--CHHHHHHTTCCS--SSEEEEEET--TEEEEECSCSCHHHHHHHHHHHHSCSE
T ss_pred CC--CHHHHHHcCCCc--CCeEEEEcC--CceeeecCcccHHHHHHHHHhhcccce
Confidence 86 578899999985 999999864 566777888999999999999987543
No 13
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=98.96 E-value=2.7e-08 Score=77.73 Aligned_cols=122 Identities=16% Similarity=0.118 Sum_probs=91.4
Q ss_pred EEeccCCcCHHHHHHHHHhCCCCCeEecC-CCchhhhhcCC-CceEEEEeecCChhH-HHHHHHHHHhhcCceEEEEEeC
Q 031686 19 FIFSDVSFTISVIDDFISLNKIPPMITYS-RETTPLILNSP-LKLLWLFAAVHDSEA-KSIFQETARAFKGKLLFVYSQI 95 (155)
Q Consensus 19 ~~~y~g~~~~~~l~~fI~~~~~P~v~e~~-~~~~~~i~~~~-~~~v~lf~~~~~~~~-~~~~~~vA~~~~~~i~F~~vd~ 95 (155)
...|.|.++.+.|.+|+....-|.+.+++ .+.++.+.... .+.+++| +..+ . ...|+++|..+++++.|+.++.
T Consensus 121 ~~~y~G~r~~~~i~~fl~~~~~~~v~~i~~~~~l~~~l~~~~~~~vi~f-s~~~--~~~~~f~~~A~~~~~~~~F~~v~~ 197 (298)
T 3ed3_A 121 NEVYSGARTLAPIVDFSLSRIRSYVKKFVRIDTLGSLLRKSPKLSVVLF-SKQD--KISPVYKSIALDWLGKFDFYSISN 197 (298)
T ss_dssp EEECCSCCSHHHHHHHHHTTCCCCEEECSCGGGHHHHHTSCSSEEEEEE-ESSS--SCCHHHHHHHHHTBTTEEEEEEEG
T ss_pred ceeecCCcCHHHHHHHHHHhcccccEEcCCHHHHHHHHhcCCceEEEEE-cCCC--cchHHHHHHHHHhhcCcEEEEEcc
Confidence 56899999999999999999999999995 46788877764 3446665 3322 3 5689999999999999999987
Q ss_pred CCcchhhhh--hhhCC----------------CCCCcceEEEEecCCCeeecCCC-CCCHHHHHHHHHH
Q 031686 96 YPKLKGQIF--DYFGV----------------TCYTSRVIAVASIRKRKKYVLNG-ELTLSNVKSFALD 145 (155)
Q Consensus 96 ~~~~~~~~~--~~~gl----------------~~~~~P~v~i~~~~~~~kY~~~~-~~t~~~I~~Fi~~ 145 (155)
+.. .... +.|+. .....|++++++...++.+.+++ .++.+.|.+||.+
T Consensus 198 ~~~--a~~~~~~~~~~~~p~i~~~~~~~~~~~~~~~~P~lv~~~~~~~~~~~y~g~~~~~~~i~~fi~~ 264 (298)
T 3ed3_A 198 KKL--KQLTDMNPTYEKTPEIFKYLQKVIPEQRQSDKSKLVVFDADKDKFWEYEGNSINKNDISKFLRD 264 (298)
T ss_dssp GGC--CCCCTTCTTSTTCHHHHHHHHHHHHHHTTCSSCEEEEEETTTTEEEECCCSSCCHHHHHHHHHH
T ss_pred hHh--hhhhhhhhhcccCcchhhhhhcccccccccCCCeEEEEcCCCCceEEeccccCCHHHHHHHHHh
Confidence 641 2222 23331 11458999999876565667775 7999999999985
No 14
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=98.88 E-value=2.5e-08 Score=79.06 Aligned_cols=122 Identities=14% Similarity=0.084 Sum_probs=94.2
Q ss_pred EeccCCcCHHHHHHHHHhCCCCCeEecC-CCchhhhhc-CCCceEEEEeecCChhHHHHHHHHHHhhcCceEEEEEeCCC
Q 031686 20 IFSDVSFTISVIDDFISLNKIPPMITYS-RETTPLILN-SPLKLLWLFAAVHDSEAKSIFQETARAFKGKLLFVYSQIYP 97 (155)
Q Consensus 20 ~~y~g~~~~~~l~~fI~~~~~P~v~e~~-~~~~~~i~~-~~~~~v~lf~~~~~~~~~~~~~~vA~~~~~~i~F~~vd~~~ 97 (155)
..|.|.++.+.|.+||.+...|.+.+++ .+++..+.+ .....++.|+...+......|.++|+.+++++.|+.+..
T Consensus 102 ~~~~G~~~~~~l~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~vv~ff~~~~~~~~~~~~~~A~~~~~~~~f~~~~~-- 179 (350)
T 1sji_A 102 IEFDGEFAADVLVEFLLDLIEDPVEIINSKLEVQAFERIEDQIKLIGFFKSEESEYYKAFEEAAEHFQPYIKFFATFD-- 179 (350)
T ss_dssp EEECSCCCHHHHHHHHHTTSSCSEEECCSHHHHHHHHHCCSSCEEEEECSCTTSHHHHHHHHHHHHTTTTSEEEEECC--
T ss_pred EEecCCCCHHHHHHHHHHhcCCcceeccchHHHHHHhccCCCcEEEEEECCCCcHHHHHHHHHHHhhccCcEEEEECC--
Confidence 3789999999999999999999999996 567777766 454556777665332226789999999999999998743
Q ss_pred cchhhhhhhhCCCCCCcceEEEEecCCCeeecCCCC-CCHHHHHHHHHHHHcC
Q 031686 98 KLKGQIFDYFGVTCYTSRVIAVASIRKRKKYVLNGE-LTLSNVKSFALDFLGD 149 (155)
Q Consensus 98 ~~~~~~~~~~gl~~~~~P~v~i~~~~~~~kY~~~~~-~t~~~I~~Fi~~f~~G 149 (155)
+.+.+.+|++ .|++++..........++|+ ++.++|.+|++...-.
T Consensus 180 ---~~~~~~~~v~---~p~i~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p 226 (350)
T 1sji_A 180 ---KGVAKKLSLK---MNEVDFYEPFMDEPIAIPDKPYTEEELVEFVKEHQRP 226 (350)
T ss_dssp ---HHHHHHHTCC---TTCEEEECTTCSSCEECSSSSCCHHHHHHHHHHHCCC
T ss_pred ---HHHHHHcCCC---CCcEEEEeCCCCCceecCCCCCCHHHHHHHHHHcCcc
Confidence 3578889997 79999988633333345675 8999999999986443
No 15
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=98.84 E-value=1.1e-07 Score=70.76 Aligned_cols=122 Identities=13% Similarity=0.140 Sum_probs=97.3
Q ss_pred eccCCcCHHHHHHHHHhCCCC-------CeEecCCCchhhhhcCCCceEEEEeecC--ChhH-HHHHHHHHHhhcCc---
Q 031686 21 FSDVSFTISVIDDFISLNKIP-------PMITYSRETTPLILNSPLKLLWLFAAVH--DSEA-KSIFQETARAFKGK--- 87 (155)
Q Consensus 21 ~y~g~~~~~~l~~fI~~~~~P-------~v~e~~~~~~~~i~~~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~--- 87 (155)
.|.|.++.++|.+|+....-| .+..++.+++..+...+.+.++.|...- .-.. ...+.++|++++++
T Consensus 103 ~~~g~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~ 182 (241)
T 3idv_A 103 DYEGSRTQEEIVAKVREVSQPDWTPPPEVTLVLTKENFDEVVNDADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPP 182 (241)
T ss_dssp ECCSCSCHHHHHHHHHHHHSTTCCCCCCSSEECCTTTHHHHHHHCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSC
T ss_pred cccCcccHHHHHHHHhhccCcccccccccceeccHHHHHHhhccCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCc
Confidence 478999999999999987655 4777889999998887766677776543 2234 66888999998765
Q ss_pred eEEEEEeCCCcchhhhhhhhCCCCCCcceEEEEecCCCeeecCCCCCCHHHHHHHHHHHHc
Q 031686 88 LLFVYSQIYPKLKGQIFDYFGVTCYTSRVIAVASIRKRKKYVLNGELTLSNVKSFALDFLG 148 (155)
Q Consensus 88 i~F~~vd~~~~~~~~~~~~~gl~~~~~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~~ 148 (155)
+.|+.+|.+. ...+.+.||+.. +|++++++. |+...+.|..+.++|.+|+++...
T Consensus 183 v~~~~vd~~~--~~~l~~~~~v~~--~Pt~~~~~~--g~~~~~~g~~~~~~l~~~l~~~~~ 237 (241)
T 3idv_A 183 IPLAKVDATA--ETDLAKRFDVSG--YPTLKIFRK--GRPYDYNGPREKYGIVDYMIEQSG 237 (241)
T ss_dssp CCEEEEETTT--CHHHHHHTTCCS--SSEEEEEET--TEEEECCSCCSHHHHHHHHHHHTT
T ss_pred EEEEEEECCC--CHHHHHHcCCcc--cCEEEEEEC--CeEEEecCCCCHHHHHHHHHhhhC
Confidence 9999999986 578899999974 899999874 455556788999999999998754
No 16
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=98.83 E-value=3.2e-08 Score=79.19 Aligned_cols=120 Identities=14% Similarity=0.082 Sum_probs=93.0
Q ss_pred EeccCCcCHHHHHHHHHhCCCCCeEecC-CCchhhhhc-CCCceEEEEeecCChhHHHHHHHHHHhhcCceEEEEEeCCC
Q 031686 20 IFSDVSFTISVIDDFISLNKIPPMITYS-RETTPLILN-SPLKLLWLFAAVHDSEAKSIFQETARAFKGKLLFVYSQIYP 97 (155)
Q Consensus 20 ~~y~g~~~~~~l~~fI~~~~~P~v~e~~-~~~~~~i~~-~~~~~v~lf~~~~~~~~~~~~~~vA~~~~~~i~F~~vd~~~ 97 (155)
..|.|.++.+.|.+||.++..|.+.+++ .+++..+.. .....+++|+...+......|.++|..+++++.|+.+...
T Consensus 104 ~~y~G~~~~~~i~~~i~~~~~~~v~~i~~~~~~~~~~~~~~~~~vv~ff~~~~~~~~~~f~~~A~~~~~~~~F~~~~~~- 182 (367)
T 3us3_A 104 IEYDGEFSADTLVEFLLDVLEDPVELIEGERELQAFENIEDEIKLIGYFKNKDSEHYKAFKEAAEEFHPYIPFFATFDS- 182 (367)
T ss_dssp EECCSCCSHHHHHHHHHHHHSCSEEECCSHHHHHHHHHCCSSCEEEEECSCTTCHHHHHHHHHHHHHTTTSCEEEECCH-
T ss_pred EEeCCCCCHHHHHHHHHHhcCCCcEEcCCHHHHHHHhccCCCcEEEEEECCCCchHHHHHHHHHHhhcCCcEEEEECCH-
Confidence 4799999999999999999999999996 477888777 4444577776553322267899999999999999987543
Q ss_pred cchhhhhhhhCCCCCCcceEEEEecCCCeeecCCC-CCCHHHHHHHHHHHH
Q 031686 98 KLKGQIFDYFGVTCYTSRVIAVASIRKRKKYVLNG-ELTLSNVKSFALDFL 147 (155)
Q Consensus 98 ~~~~~~~~~~gl~~~~~P~v~i~~~~~~~kY~~~~-~~t~~~I~~Fi~~f~ 147 (155)
.+++.+|++ .|++++.....+....++| .++.+.|.+||+.-.
T Consensus 183 ----~~~~~~~v~---~p~i~lf~~~~~~~~~y~g~~~~~~~l~~fi~~~~ 226 (367)
T 3us3_A 183 ----KVAKKLTLK---LNEIDFYEAFMEEPVTIPDKPNSEEEIVNFVEEHR 226 (367)
T ss_dssp ----HHHHHHTCC---TTCEEEECTTCSSCEECSSSSCCHHHHHHHHHHTC
T ss_pred ----HHHHHcCCC---CCeEEEEcCCCCCCeecCCCCCCHHHHHHHHHHcC
Confidence 578889997 4999988763333344566 489999999998754
No 17
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=98.74 E-value=1.1e-07 Score=82.67 Aligned_cols=127 Identities=16% Similarity=0.133 Sum_probs=100.3
Q ss_pred EeccCCcCHHHHHHHHHhCCCCCeEecCCCchhhhhcCC---CceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEE
Q 031686 20 IFSDVSFTISVIDDFISLNKIPPMITYSRETTPLILNSP---LKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYS 93 (155)
Q Consensus 20 ~~y~g~~~~~~l~~fI~~~~~P~v~e~~~~~~~~i~~~~---~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~v 93 (155)
..|.|.++.++|.+||+...-|.|.+++.+++..+.... .+.++.|..+. .-.. ...+.++|+++++++.|+.+
T Consensus 522 ~~~~g~~~~~~l~~fi~~~~~~~v~~l~~~~f~~~v~~~~~~~~~lv~F~ap~C~~c~~~~p~~~~lA~~~~~~v~~~~v 601 (780)
T 3apo_A 522 HEYEGHHSAEQILEFIEDLRNPSVVSLTPSTFNELVKQRKHDEVWMVDFYSPWSHPSQVLMPEWKRMARTLTGLINVGSV 601 (780)
T ss_dssp EEECSCSCHHHHHHHHHHHHSCSEEECCHHHHHHHTTTCCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEE
T ss_pred eeecCcccHHHHHHHHHhhcccceeecCcccHHHHhhccCCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCCeEEEEE
Confidence 467899999999999999999999999999999877652 23366665543 2245 77899999999999999999
Q ss_pred eCCCcchhhhhhhhCCCCCCcceEEEEecCCCe--ee-cCCC-CCCHHHHHHHHHHHHcCC
Q 031686 94 QIYPKLKGQIFDYFGVTCYTSRVIAVASIRKRK--KY-VLNG-ELTLSNVKSFALDFLGDK 150 (155)
Q Consensus 94 d~~~~~~~~~~~~~gl~~~~~P~v~i~~~~~~~--kY-~~~~-~~t~~~I~~Fi~~f~~Gk 150 (155)
|.+. +..+.+.+|++. .|++++....... +| .++| ..+.++|.+|+++...+.
T Consensus 602 d~~~--~~~l~~~~~v~~--~Pti~~~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~~~ 658 (780)
T 3apo_A 602 DCGQ--YHSFCTQENVQR--YPEIRFYPQKSSKAYQYHSYNGWNRDAYSLRSWGLGFLPQA 658 (780)
T ss_dssp ETTT--THHHHHHTTCCS--SSEEEEECCCSSSCCSCEECCCSCCSHHHHHHHHHTTSCCC
T ss_pred ECcc--hHHHHHHcCCCC--CCeEEEEcCCCcCccchhhcCCCCCCHHHHHHHHhhhcccc
Confidence 9986 567788999975 8999998763221 23 3677 789999999999886543
No 18
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.73 E-value=1.5e-07 Score=61.28 Aligned_cols=103 Identities=16% Similarity=0.148 Sum_probs=81.0
Q ss_pred CCCeEecCCCchhhhhcCCCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCcce
Q 031686 40 IPPMITYSRETTPLILNSPLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTSRV 116 (155)
Q Consensus 40 ~P~v~e~~~~~~~~i~~~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~P~ 116 (155)
-+.+..++.+++......+.+.++.|.... .-.. ...+.++++++.+++.|+.+|.+. ...+.+.||+.. .|+
T Consensus 3 ~~~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~i~~--~Pt 78 (109)
T 3tco_A 3 EDVTLVLTEENFDEVIRNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVDE--NQKIADKYSVLN--IPT 78 (109)
T ss_dssp CCCCEECCTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTT--CHHHHHHTTCCS--SSE
T ss_pred CCeEEEecHHHHHHHHhcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCCceEEEEcccc--CHHHHHhcCccc--CCE
Confidence 366888999999999888877777777653 2344 678899999999899999999986 578889999974 899
Q ss_pred EEEEecCCCeeecCCCCCCHHHHHHHHHHHH
Q 031686 117 IAVASIRKRKKYVLNGELTLSNVKSFALDFL 147 (155)
Q Consensus 117 v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~ 147 (155)
++++. ++...+.+.|..+.+.|.+|+++++
T Consensus 79 ~~~~~-~g~~~~~~~g~~~~~~l~~~l~~~l 108 (109)
T 3tco_A 79 TLIFV-NGQLVDSLVGAVDEDTLESTVNKYL 108 (109)
T ss_dssp EEEEE-TTEEEEEEESCCCHHHHHHHHHHHC
T ss_pred EEEEc-CCcEEEeeeccCCHHHHHHHHHHHh
Confidence 99884 3222344567789999999999875
No 19
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=98.63 E-value=3.5e-07 Score=59.41 Aligned_cols=101 Identities=18% Similarity=0.132 Sum_probs=77.0
Q ss_pred eEecCCCchhhhhcCCCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCcceEEE
Q 031686 43 MITYSRETTPLILNSPLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTSRVIAV 119 (155)
Q Consensus 43 v~e~~~~~~~~i~~~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~P~v~i 119 (155)
+.+++.+++......+.+.++.|.... .-.. ...+.++++++.+++.|+.+|.+. ...+.+.||+.. .|++++
T Consensus 3 v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~--~Pt~~~ 78 (109)
T 2yzu_A 3 PIEVTDQNFDETLGQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGKLLVAKLDVDE--NPKTAMRYRVMS--IPTVIL 78 (109)
T ss_dssp CEECCTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTT--CHHHHHHTTCCS--SSEEEE
T ss_pred ceEccHhHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCceEEEEEECCC--CHhHHHhCCCCc--CCEEEE
Confidence 578899999888877777777777553 2244 678899999999889999999986 567889999874 899998
Q ss_pred EecCCCe-eecCCCCCCHHHHHHHHHHHHcC
Q 031686 120 ASIRKRK-KYVLNGELTLSNVKSFALDFLGD 149 (155)
Q Consensus 120 ~~~~~~~-kY~~~~~~t~~~I~~Fi~~f~~G 149 (155)
+. .|+ .+.+.|..+.+.|.+|+++.+..
T Consensus 79 ~~--~g~~~~~~~g~~~~~~l~~~l~~~l~~ 107 (109)
T 2yzu_A 79 FK--DGQPVEVLVGAQPKRNYQAKIEKHLPA 107 (109)
T ss_dssp EE--TTEEEEEEESCCCHHHHHHHHHTTC--
T ss_pred Ee--CCcEeeeEeCCCCHHHHHHHHHHHhhh
Confidence 84 243 33455778899999999987653
No 20
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=98.62 E-value=1.2e-06 Score=57.07 Aligned_cols=100 Identities=18% Similarity=0.175 Sum_probs=75.1
Q ss_pred CeEecCCCchhhh-hcCCCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCcceE
Q 031686 42 PMITYSRETTPLI-LNSPLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTSRVI 117 (155)
Q Consensus 42 ~v~e~~~~~~~~i-~~~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~P~v 117 (155)
.|.+++.+++... ...+++.++.|.... .-.. ...+.++|+++.+++.|+.+|.+. ...+.+.+|+.. .|++
T Consensus 3 ~v~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~--~Pt~ 78 (108)
T 2trx_A 3 KIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQ--NPGTAPKYGIRG--IPTL 78 (108)
T ss_dssp TEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTT--CTTHHHHTTCCS--SSEE
T ss_pred cceecchhhHHHHHHhcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCCcEEEEEECCC--CHHHHHHcCCcc--cCEE
Confidence 4778999998854 455556676776553 1244 677889999998889999999986 567889999874 8999
Q ss_pred EEEecCCCe-eecCCCCCCHHHHHHHHHHHH
Q 031686 118 AVASIRKRK-KYVLNGELTLSNVKSFALDFL 147 (155)
Q Consensus 118 ~i~~~~~~~-kY~~~~~~t~~~I~~Fi~~f~ 147 (155)
+++. .|+ .+.+.|..+.+.|.+|++..+
T Consensus 79 ~~~~--~G~~~~~~~G~~~~~~l~~~l~~~l 107 (108)
T 2trx_A 79 LLFK--NGEVAATKVGALSKGQLKEFLDANL 107 (108)
T ss_dssp EEEE--TTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEEe--CCEEEEEEecCCCHHHHHHHHHHhh
Confidence 9884 343 334557789999999999875
No 21
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=98.61 E-value=1.4e-06 Score=57.23 Aligned_cols=103 Identities=15% Similarity=0.165 Sum_probs=77.9
Q ss_pred CCeEecCCCchhhhh-cCCCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCcce
Q 031686 41 PPMITYSRETTPLIL-NSPLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTSRV 116 (155)
Q Consensus 41 P~v~e~~~~~~~~i~-~~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~P~ 116 (155)
..+.+++.+++.... ..+.+.++.|.... .-.. ...+.++++++.+++.|+.+|.+. ...+.+.+|+.. .|+
T Consensus 7 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~--~~~~~~~~~v~~--~Pt 82 (115)
T 1thx_A 7 KGVITITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDP--NPTTVKKYKVEG--VPA 82 (115)
T ss_dssp CSEEECCGGGHHHHTTTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEESTT--CHHHHHHTTCCS--SSE
T ss_pred CceEEeeccchhhHhhcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCcEEEEEEEcCC--CHHHHHHcCCCc--eeE
Confidence 348889999988654 45556677776653 2345 778899999998889999999986 567889999874 899
Q ss_pred EEEEecCCCe-eecCCCCCCHHHHHHHHHHHHcC
Q 031686 117 IAVASIRKRK-KYVLNGELTLSNVKSFALDFLGD 149 (155)
Q Consensus 117 v~i~~~~~~~-kY~~~~~~t~~~I~~Fi~~f~~G 149 (155)
++++. .|+ .+.+.|..+.+.|.+|++..+.+
T Consensus 83 ~~~~~--~G~~~~~~~g~~~~~~l~~~l~~~l~~ 114 (115)
T 1thx_A 83 LRLVK--GEQILDSTEGVISKDKLLSFLDTHLNN 114 (115)
T ss_dssp EEEEE--TTEEEEEEESCCCHHHHHHHHHHHHC-
T ss_pred EEEEc--CCEEEEEecCCCCHHHHHHHHHHHhcC
Confidence 99884 343 33455778999999999998764
No 22
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=98.60 E-value=7.8e-07 Score=57.57 Aligned_cols=98 Identities=11% Similarity=0.047 Sum_probs=76.0
Q ss_pred CeEecCCCchhhhhcCCCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCcceEE
Q 031686 42 PMITYSRETTPLILNSPLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTSRVIA 118 (155)
Q Consensus 42 ~v~e~~~~~~~~i~~~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~P~v~ 118 (155)
.+.+++.+++.... .+.+.++.|.... .-.. ...+.++++++.+++.|+.+|.+. ...+.+.||+.. .|+++
T Consensus 4 ~v~~l~~~~~~~~~-~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~--~Pt~~ 78 (106)
T 3die_A 4 AIVKVTDADFDSKV-ESGVQLVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVDE--NPSTAAKYEVMS--IPTLI 78 (106)
T ss_dssp CCEECCTTTHHHHS-CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTTCEEEEEETTT--CHHHHHHTTCCS--BSEEE
T ss_pred ceEECCHHHHHHHh-cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCCcEEEEEECCc--CHHHHHhCCCcc--cCEEE
Confidence 47788999999888 5656677776553 2345 778899999999889999999986 578889999974 89999
Q ss_pred EEecCCCe-eecCCCCCCHHHHHHHHHHH
Q 031686 119 VASIRKRK-KYVLNGELTLSNVKSFALDF 146 (155)
Q Consensus 119 i~~~~~~~-kY~~~~~~t~~~I~~Fi~~f 146 (155)
+++ .|+ ...+.|..+.++|.+|+++.
T Consensus 79 ~~~--~G~~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 3die_A 79 VFK--DGQPVDKVVGFQPKENLAEVLDKH 105 (106)
T ss_dssp EEE--TTEEEEEEESCCCHHHHHHHHHTT
T ss_pred EEe--CCeEEEEEeCCCCHHHHHHHHHHh
Confidence 886 343 33455778999999999864
No 23
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=98.59 E-value=4.5e-07 Score=58.81 Aligned_cols=99 Identities=14% Similarity=0.116 Sum_probs=75.8
Q ss_pred eEecCCCchhhhhcCCCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCcceEEE
Q 031686 43 MITYSRETTPLILNSPLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTSRVIAV 119 (155)
Q Consensus 43 v~e~~~~~~~~i~~~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~P~v~i 119 (155)
|.+++.+++......+++.++.|.... .-.. ...+.++++++.+++.|+.+|.+. ...+.+.+|+.. .|++++
T Consensus 2 v~~l~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~--~~~~~~~~~v~~--~Pt~~~ 77 (105)
T 1nsw_A 2 TMTLTDANFQQAIQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDE--NPETTSQFGIMS--IPTLIL 77 (105)
T ss_dssp CEEECTTTHHHHHSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTTCEEEEEETTT--CHHHHHHTTCCS--SSEEEE
T ss_pred ceeccHHhHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCcEEEEEECcC--CHHHHHHcCCcc--ccEEEE
Confidence 568899999988887777777777553 1244 667889999998889999999986 567889999974 899998
Q ss_pred EecCCCe-eecCCCCCCHHHHHHHHHHHH
Q 031686 120 ASIRKRK-KYVLNGELTLSNVKSFALDFL 147 (155)
Q Consensus 120 ~~~~~~~-kY~~~~~~t~~~I~~Fi~~f~ 147 (155)
+. + |+ .+.+.|..+.+.+.+|+++.+
T Consensus 78 ~~-~-G~~~~~~~G~~~~~~l~~~l~~~l 104 (105)
T 1nsw_A 78 FK-G-GRPVKQLIGYQPKEQLEAQLADVL 104 (105)
T ss_dssp EE-T-TEEEEEEESCCCHHHHHHHTTTTT
T ss_pred Ee-C-CeEEEEEecCCCHHHHHHHHHHHh
Confidence 84 2 43 334457778899999987654
No 24
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=98.59 E-value=7.7e-07 Score=57.13 Aligned_cols=99 Identities=15% Similarity=0.096 Sum_probs=75.7
Q ss_pred eEecCCCchhhhhcCCCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCcceEEE
Q 031686 43 MITYSRETTPLILNSPLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTSRVIAV 119 (155)
Q Consensus 43 v~e~~~~~~~~i~~~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~P~v~i 119 (155)
|.+++.+++......+.+.++.|.... .-.. ...+.++++++.+ +.|+.+|.+. ...+.+.+|+.. .|++.+
T Consensus 1 V~~l~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~v~~~~--~~~~~~~~~v~~--~Pt~~~ 75 (104)
T 2e0q_A 1 VIHLDSKNFDSFLASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ-VGFGKLNSDE--NPDIAARYGVMS--LPTVIF 75 (104)
T ss_dssp CEECCTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTT--CHHHHHHTTCCS--SCEEEE
T ss_pred CeecCHHHHHHHHhcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC-ceEEEEECCC--CHHHHHhCCccc--cCEEEE
Confidence 467889999888877766677776553 2244 6788899999887 9999999986 567889999874 899998
Q ss_pred EecCCCe-eecCCCCCCHHHHHHHHHHHHc
Q 031686 120 ASIRKRK-KYVLNGELTLSNVKSFALDFLG 148 (155)
Q Consensus 120 ~~~~~~~-kY~~~~~~t~~~I~~Fi~~f~~ 148 (155)
+. .|+ .+.+.|..+.+.+.+|++..+.
T Consensus 76 ~~--~g~~~~~~~g~~~~~~l~~~l~~~l~ 103 (104)
T 2e0q_A 76 FK--DGEPVDEIIGAVPREEIEIRIKNLLG 103 (104)
T ss_dssp EE--TTEEEEEEESCCCHHHHHHHHHHHHT
T ss_pred EE--CCeEhhhccCCCCHHHHHHHHHHHhc
Confidence 84 243 3344577889999999998764
No 25
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.58 E-value=1.7e-06 Score=58.30 Aligned_cols=104 Identities=17% Similarity=0.092 Sum_probs=78.9
Q ss_pred CCeEecCCCchhh-hhcCCCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCcce
Q 031686 41 PPMITYSRETTPL-ILNSPLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTSRV 116 (155)
Q Consensus 41 P~v~e~~~~~~~~-i~~~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~P~ 116 (155)
+.+.+++.+++.. +...+++.++.|.... .-.. ...+.++|+++++.+.|+.+|.+. ...+.+.||+.. +|+
T Consensus 17 ~~v~~l~~~~f~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~--~~~l~~~~~v~~--~Pt 92 (130)
T 2dml_A 17 DDVIELTPSNFNREVIQSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVNADK--HQSLGGQYGVQG--FPT 92 (130)
T ss_dssp SSSEECCTTTHHHHTTTCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTTSEEEEEETTT--CHHHHHHHTCCS--SSE
T ss_pred CCcEECCHHHHHHHHhcCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCceEEEEEeCCC--CHHHHHHcCCCc--cCE
Confidence 3478899999887 4455666677776553 2244 678899999998889999999986 567889999874 899
Q ss_pred EEEEecCCCeeecCCCCCCHHHHHHHHHHHHc
Q 031686 117 IAVASIRKRKKYVLNGELTLSNVKSFALDFLG 148 (155)
Q Consensus 117 v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~~ 148 (155)
+++++......+.+.|..+.++|.+|+.+.+.
T Consensus 93 ~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~l~ 124 (130)
T 2dml_A 93 IKIFGANKNKPEDYQGGRTGEAIVDAALSALR 124 (130)
T ss_dssp EEEESSCTTSCEECCSCCSHHHHHHHHHHHHH
T ss_pred EEEEeCCCCeEEEeecCCCHHHHHHHHHHHHh
Confidence 99998532224556677899999999988763
No 26
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=98.57 E-value=6.7e-07 Score=58.48 Aligned_cols=100 Identities=14% Similarity=0.231 Sum_probs=77.3
Q ss_pred eEecCCCchhhhh-cCCCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCcceEE
Q 031686 43 MITYSRETTPLIL-NSPLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTSRVIA 118 (155)
Q Consensus 43 v~e~~~~~~~~i~-~~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~P~v~ 118 (155)
+.+++.+++.... ..+.+.++.|.... .-.. ...+.++++++.+++.|+.+|.+. ...+.+.||+.. +|+++
T Consensus 6 v~~l~~~~~~~~~~~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~--~Pt~~ 81 (111)
T 3gnj_A 6 LEKLDTNTFEQLIYDEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEESFGFYYVDVEE--EKTLFQRFSLKG--VPQIL 81 (111)
T ss_dssp SEECCHHHHHHHHTTSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTT--CHHHHHHTTCCS--SCEEE
T ss_pred ceecCHHHHHHHHHhcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCceEEEEEECCc--ChhHHHhcCCCc--CCEEE
Confidence 6678888888877 56666677776553 2244 678899999999889999999996 678889999974 89999
Q ss_pred EEecCCCe-eecCCCCCCHHHHHHHHHHHHc
Q 031686 119 VASIRKRK-KYVLNGELTLSNVKSFALDFLG 148 (155)
Q Consensus 119 i~~~~~~~-kY~~~~~~t~~~I~~Fi~~f~~ 148 (155)
++. .|+ ...+.|..+.+.|.+|+++.+.
T Consensus 82 ~~~--~g~~~~~~~g~~~~~~l~~~l~~~l~ 110 (111)
T 3gnj_A 82 YFK--DGEYKGKMAGDVEDDEVEQMIADVLE 110 (111)
T ss_dssp EEE--TTEEEEEEESSCCHHHHHHHHHHHHH
T ss_pred EEE--CCEEEEEEeccCCHHHHHHHHHHHhc
Confidence 885 243 3345577899999999998764
No 27
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=98.56 E-value=1.7e-06 Score=59.95 Aligned_cols=103 Identities=22% Similarity=0.243 Sum_probs=81.6
Q ss_pred CeEecCCCchhhhhcCCCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCcceEE
Q 031686 42 PMITYSRETTPLILNSPLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTSRVIA 118 (155)
Q Consensus 42 ~v~e~~~~~~~~i~~~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~P~v~ 118 (155)
.+..++.+++......+++.++.|.... .-.. ...+.++++++.+++.|+.+|.+. ...+.+.||+.. +|+++
T Consensus 39 ~v~~l~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~--~~~l~~~~~v~~--~Pt~~ 114 (148)
T 3p2a_A 39 EVINATAETLDKLLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGKVRFVKVNTEA--EPALSTRFRIRS--IPTIM 114 (148)
T ss_dssp CCEECCTTTHHHHTTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTCEEEEEETTT--CHHHHHHTTCCS--SSEEE
T ss_pred CceecCHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCceEEEEEECcC--CHHHHHHCCCCc--cCEEE
Confidence 4778899999988877777777777553 2244 678999999998899999999986 678889999974 89999
Q ss_pred EEecCCCe-eecCCCCCCHHHHHHHHHHHHcCC
Q 031686 119 VASIRKRK-KYVLNGELTLSNVKSFALDFLGDK 150 (155)
Q Consensus 119 i~~~~~~~-kY~~~~~~t~~~I~~Fi~~f~~Gk 150 (155)
+++ .|+ ...+.|..+.+.|.+|+++.+...
T Consensus 115 ~~~--~G~~~~~~~G~~~~~~l~~~l~~~l~~~ 145 (148)
T 3p2a_A 115 LYR--NGKMIDMLNGAVPKAPFDNWLDEQLSRD 145 (148)
T ss_dssp EEE--TTEEEEEESSCCCHHHHHHHHHHHHHSC
T ss_pred EEE--CCeEEEEEeCCCCHHHHHHHHHHHhccc
Confidence 886 243 344567889999999999988653
No 28
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.56 E-value=2.1e-06 Score=58.66 Aligned_cols=107 Identities=10% Similarity=0.072 Sum_probs=82.5
Q ss_pred CCeEecCCCchhhhhcCCCceEEEEeecC--ChhH-HHHHHHHHHhhcCc---eEEEEEeCCCcchhhhhhhhCCCCCCc
Q 031686 41 PPMITYSRETTPLILNSPLKLLWLFAAVH--DSEA-KSIFQETARAFKGK---LLFVYSQIYPKLKGQIFDYFGVTCYTS 114 (155)
Q Consensus 41 P~v~e~~~~~~~~i~~~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~---i~F~~vd~~~~~~~~~~~~~gl~~~~~ 114 (155)
..+.+++.+++......+++.++.|.... .-.. ...+.+++++++++ +.|+.+|.+. ...+.+.||+.. +
T Consensus 17 ~~v~~l~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~--~~~~~~~~~v~~--~ 92 (140)
T 2dj1_A 17 NGVWVLNDGNFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATS--ASMLASKFDVSG--Y 92 (140)
T ss_dssp TTEEECCTTTHHHHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTT--CHHHHHHTTCCS--S
T ss_pred CCCEEcChHhHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcc--cHHHHHHCCCCc--c
Confidence 35788899999988887766677776553 1234 66788899988775 9999999986 567889999874 8
Q ss_pred ceEEEEecCCCeeecCCCCCCHHHHHHHHHHHHcCCCcc
Q 031686 115 RVIAVASIRKRKKYVLNGELTLSNVKSFALDFLGDKLRN 153 (155)
Q Consensus 115 P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~~Gkl~p 153 (155)
|+++++. .|+...+.|..+.+.|.+|++..+.....+
T Consensus 93 Pt~~~~~--~G~~~~~~g~~~~~~l~~~l~~~~~~~~~~ 129 (140)
T 2dj1_A 93 PTIKILK--KGQAVDYDGSRTQEEIVAKVREVSQPDWTP 129 (140)
T ss_dssp SEEEEEE--TTEEEECCSCCCHHHHHHHHHHHHSSSCCC
T ss_pred CeEEEEE--CCcEEEcCCCCCHHHHHHHHHHhcCCCCCC
Confidence 9999885 344445667889999999999998765543
No 29
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=98.55 E-value=8.9e-07 Score=72.65 Aligned_cols=123 Identities=15% Similarity=0.072 Sum_probs=91.7
Q ss_pred EEeccCCcCHHHHHHHHHhCCCCCeEecC-CCchhhhhcCCCceEEEEeecCChhHHHHHHHHHHhhcCceEEEEEeCCC
Q 031686 19 FIFSDVSFTISVIDDFISLNKIPPMITYS-RETTPLILNSPLKLLWLFAAVHDSEAKSIFQETARAFKGKLLFVYSQIYP 97 (155)
Q Consensus 19 ~~~y~g~~~~~~l~~fI~~~~~P~v~e~~-~~~~~~i~~~~~~~v~lf~~~~~~~~~~~~~~vA~~~~~~i~F~~vd~~~ 97 (155)
...|.|.++.+.|.+|+.+...|.+.+++ .+.+..+.+.....+++|+...+.+..+.|.++|..+++++.|+.+...
T Consensus 88 ~~~~~G~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~f~~~a~~~~~~~~F~~~~~~- 166 (481)
T 3f8u_A 88 AGAYDGPRTADGIVSHLKKQAGPASVPLRTEEEFKKFISDKDASIVGFFDDSFSEAHSEFLKAASNLRDNYRFAHTNVE- 166 (481)
T ss_dssp EEECCSCSSHHHHHHHHHHHTSCSEEEECSHHHHHHHTTSSSCEEEEEESCTTCHHHHHHHHHHHHHTTTSCEEEECCH-
T ss_pred eeeecCccCHHHHHHHHHhhcccCceecCCHHHHHHHHhcCCcEEEEEECCCccchHHHHHHHHHHhccCceEEEECCH-
Confidence 35789999999999999999999999995 5667777666655566676543322278999999999999999987443
Q ss_pred cchhhhhhhhCCCCCCcceEEEEec------CCCeeecCC-CCCCHHHHHHHHHHHHcC
Q 031686 98 KLKGQIFDYFGVTCYTSRVIAVASI------RKRKKYVLN-GELTLSNVKSFALDFLGD 149 (155)
Q Consensus 98 ~~~~~~~~~~gl~~~~~P~v~i~~~------~~~~kY~~~-~~~t~~~I~~Fi~~f~~G 149 (155)
.+++.+|++. |.+++..+ ..+....++ +.++.+.|.+||+.-.-.
T Consensus 167 ----~~~~~~~v~~---~~i~~~~p~~~~~~~~~~~~~y~~~~~~~~~l~~fi~~~~~p 218 (481)
T 3f8u_A 167 ----SLVNEYDDNG---EGIILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFG 218 (481)
T ss_dssp ----HHHHHHCSSS---EEEEEECCGGGCBTTBCSEEECCCSSCCHHHHHHHHHHHTTT
T ss_pred ----HHHHHhCCCC---CcEEEEecccccCccCCcccccCCCCCCHHHHHHHHHHhCCC
Confidence 5778899874 44666662 122344566 678999999999886543
No 30
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=98.55 E-value=1.5e-06 Score=56.24 Aligned_cols=99 Identities=15% Similarity=0.104 Sum_probs=74.1
Q ss_pred CeEecCCCchhhhh-cCCCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCcceE
Q 031686 42 PMITYSRETTPLIL-NSPLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTSRVI 117 (155)
Q Consensus 42 ~v~e~~~~~~~~i~-~~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~P~v 117 (155)
.+.+++.+++.... ..+.+.++.|.... .-.. ...+.++++++.+++.|+.+|.+. ...+.+.+|+.. .|++
T Consensus 3 ~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~--~Pt~ 78 (107)
T 2i4a_A 3 HTLAVSDSSFDQDVLKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDD--NPETPNAYQVRS--IPTL 78 (107)
T ss_dssp CEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTSEEEEEEETTT--CCHHHHHTTCCS--SSEE
T ss_pred ceeecchhhhhHHHHhCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCCcEEEEEEECCC--CHHHHHhcCCCc--cCEE
Confidence 47788999987654 45556677776553 1244 677889999998889999999986 567889999864 8999
Q ss_pred EEEecCCCe-eecCCCCCCHHHHHHHHHHH
Q 031686 118 AVASIRKRK-KYVLNGELTLSNVKSFALDF 146 (155)
Q Consensus 118 ~i~~~~~~~-kY~~~~~~t~~~I~~Fi~~f 146 (155)
+++. .|+ .+.+.|..+.+.|.+|+++.
T Consensus 79 ~~~~--~G~~~~~~~G~~~~~~l~~~l~~~ 106 (107)
T 2i4a_A 79 MLVR--DGKVIDKKVGALPKSQLKAWVESA 106 (107)
T ss_dssp EEEE--TTEEEEEEESCCCHHHHHHHHHHT
T ss_pred EEEe--CCEEEEEecCCCCHHHHHHHHHhc
Confidence 9884 343 33455778999999999875
No 31
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=98.55 E-value=1.5e-06 Score=57.40 Aligned_cols=101 Identities=14% Similarity=0.085 Sum_probs=76.9
Q ss_pred eEecCCCchhhhhcCCCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCcceEEE
Q 031686 43 MITYSRETTPLILNSPLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTSRVIAV 119 (155)
Q Consensus 43 v~e~~~~~~~~i~~~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~P~v~i 119 (155)
+.+++.+++.... .+++.++.|.... .-.. ...+.++|+++++++.|+.+|.+. ...+.+.||+.. .|++++
T Consensus 3 v~~l~~~~~~~~~-~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~--~Pt~~~ 77 (112)
T 2voc_A 3 IVKATDQSFSAET-SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDE--NQETAGKYGVMS--IPTLLV 77 (112)
T ss_dssp CEECCTTTHHHHH-SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTTTCEEEEEETTT--CCSHHHHTTCCS--BSEEEE
T ss_pred eEEecHHHHHHHh-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCcEEEEEECCC--CHHHHHHcCCCc--ccEEEE
Confidence 5678999998877 6666676776543 2244 677889999998889999999986 567889999874 899998
Q ss_pred EecCCCe-eecCCCCCCHHHHHHHHHHHHcCC
Q 031686 120 ASIRKRK-KYVLNGELTLSNVKSFALDFLGDK 150 (155)
Q Consensus 120 ~~~~~~~-kY~~~~~~t~~~I~~Fi~~f~~Gk 150 (155)
+. + |+ .+.+.|..+.++|.+|+++.....
T Consensus 78 ~~-~-G~~~~~~~G~~~~~~l~~~l~~~~~~~ 107 (112)
T 2voc_A 78 LK-D-GEVVETSVGFKPKEALQELVNKHLLEH 107 (112)
T ss_dssp EE-T-TEEEEEEESCCCHHHHHHHHHTTSCSC
T ss_pred Ee-C-CEEEEEEeCCCCHHHHHHHHHHHHHhh
Confidence 84 3 43 344567789999999998876544
No 32
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=98.53 E-value=1.6e-06 Score=59.07 Aligned_cols=99 Identities=18% Similarity=0.182 Sum_probs=74.4
Q ss_pred eEecCCCchhhh-hcCCCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCcceEE
Q 031686 43 MITYSRETTPLI-LNSPLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTSRVIA 118 (155)
Q Consensus 43 v~e~~~~~~~~i-~~~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~P~v~ 118 (155)
|.+++.+++... .+.+++.++.|.... .-.. ...+.++++++.+++.|+.+|.+. ...+.+.||+.. +|+++
T Consensus 24 v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~--~Pt~~ 99 (128)
T 2o8v_B 24 IIHLTDDSFDTDVLKADGAILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQ--NPGTAPKYGIRG--IPTLL 99 (128)
T ss_dssp SEEECTTTHHHHTTTCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTTEEEEEEETTT--CCTTSGGGTCCS--SSEEE
T ss_pred cEecChhhHHHHHHhcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCC--CHHHHHHcCCCc--cCEEE
Confidence 677888888854 455556666676553 1244 678899999998889999999986 567888899874 89999
Q ss_pred EEecCCCe-eecCCCCCCHHHHHHHHHHHH
Q 031686 119 VASIRKRK-KYVLNGELTLSNVKSFALDFL 147 (155)
Q Consensus 119 i~~~~~~~-kY~~~~~~t~~~I~~Fi~~f~ 147 (155)
++. .|+ .+.+.|..+.+.|.+|+++.+
T Consensus 100 ~~~--~G~~~~~~~G~~~~~~l~~~l~~~l 127 (128)
T 2o8v_B 100 LFK--NGEVAATKVGALSKGQLKEFLDANL 127 (128)
T ss_dssp EEE--TTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEe--CCEEEEEEcCCCCHHHHHHHHHHhh
Confidence 884 343 344567789999999999876
No 33
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.53 E-value=1.6e-06 Score=58.54 Aligned_cols=107 Identities=17% Similarity=0.158 Sum_probs=79.7
Q ss_pred CCeEecCCCchhhhh-cCCCceEEEEeecC--ChhH-HHHHHHHHHhhc----CceEEEEEeCCCcchhhhhhhhCCCCC
Q 031686 41 PPMITYSRETTPLIL-NSPLKLLWLFAAVH--DSEA-KSIFQETARAFK----GKLLFVYSQIYPKLKGQIFDYFGVTCY 112 (155)
Q Consensus 41 P~v~e~~~~~~~~i~-~~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~----~~i~F~~vd~~~~~~~~~~~~~gl~~~ 112 (155)
..+.+++.+++.... ..+.+.++.|.... .-.. ...+.++|++++ +++.|+.+|.+. ...+.+.||+..
T Consensus 7 ~~v~~l~~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~--~~~l~~~~~v~~- 83 (133)
T 1x5d_A 7 GDVIELTDDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATV--NQVLASRYGIRG- 83 (133)
T ss_dssp CSCEECCTTHHHHHTTTSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTT--CCHHHHHHTCCS-
T ss_pred CcCEEcCHhhHHHHHhcCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCC--CHHHHHhCCCCe-
Confidence 347889999988765 45555566676553 1234 667888898887 789999999986 567889999974
Q ss_pred CcceEEEEecCCCeeecCCCCCCHHHHHHHHHHHHcCCCc
Q 031686 113 TSRVIAVASIRKRKKYVLNGELTLSNVKSFALDFLGDKLR 152 (155)
Q Consensus 113 ~~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~~Gkl~ 152 (155)
+|++++++. ......+.|..+.++|.+|+++.+.....
T Consensus 84 -~Pt~~~~~~-g~~~~~~~G~~~~~~l~~~l~~~~~~~~~ 121 (133)
T 1x5d_A 84 -FPTIKIFQK-GESPVDYDGGRTRSDIVSRALDLFSDNAP 121 (133)
T ss_dssp -SSEEEEEET-TEEEEEECSCCSHHHHHHHHHHHHHHHSC
T ss_pred -eCeEEEEeC-CCceEEecCCCCHHHHHHHHHHHhhccCC
Confidence 899999985 22334556778999999999998876443
No 34
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=98.52 E-value=1.3e-06 Score=59.90 Aligned_cols=104 Identities=14% Similarity=0.127 Sum_probs=66.1
Q ss_pred CCeEecCCCchhhhhcCCCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCcceE
Q 031686 41 PPMITYSRETTPLILNSPLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTSRVI 117 (155)
Q Consensus 41 P~v~e~~~~~~~~i~~~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~P~v 117 (155)
+.+.+++.+++........+.++.|.... .-.. ...+.++++++.+++.|+.+|.+. ...+.+.||+.. +|++
T Consensus 33 ~~v~~l~~~~~~~~~~~~~~vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~--~Pt~ 108 (140)
T 1v98_A 33 PWVVEADEKGFAQEVAGAPLTLVDFFAPWCGPCRLVSPILEELARDHAGRLKVVKVNVDE--HPGLAARYGVRS--VPTL 108 (140)
T ss_dssp ----------------CCCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTT--CHHHHHHTTCCS--SSEE
T ss_pred CccccCCHHHHHHHHHcCCCEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCC--CHHHHHHCCCCc--cCEE
Confidence 56778888888876555444555565443 1244 678889999998889999999986 567888999864 8999
Q ss_pred EEEecCCCe-eecCCCCCCHHHHHHHHHHHHcCC
Q 031686 118 AVASIRKRK-KYVLNGELTLSNVKSFALDFLGDK 150 (155)
Q Consensus 118 ~i~~~~~~~-kY~~~~~~t~~~I~~Fi~~f~~Gk 150 (155)
+++. .|+ .+.+.|..+.+.|.+|++.++.|+
T Consensus 109 ~~~~--~G~~~~~~~G~~~~~~l~~~i~~~l~~~ 140 (140)
T 1v98_A 109 VLFR--RGAPVATWVGASPRRVLEERLRPYLEGR 140 (140)
T ss_dssp EEEE--TTEEEEEEESCCCHHHHHHHHHHHHTCC
T ss_pred EEEe--CCcEEEEEeCCCCHHHHHHHHHHHHccC
Confidence 9885 343 334557788999999999999874
No 35
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=98.50 E-value=1.3e-06 Score=61.54 Aligned_cols=102 Identities=15% Similarity=0.099 Sum_probs=77.9
Q ss_pred eEecCCCchhhhhcCCCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCcceEEE
Q 031686 43 MITYSRETTPLILNSPLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTSRVIAV 119 (155)
Q Consensus 43 v~e~~~~~~~~i~~~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~P~v~i 119 (155)
+.+++.+++......+.+.++.|.... .-.. ...|.++|+++.+++.|+.+|.+. ...+.+.||+.. +|++++
T Consensus 49 ~~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~~~--~~~l~~~~~i~~--~Pt~~~ 124 (155)
T 2ppt_A 49 VAGIDPAILARAERDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQVRLAKIDTQA--HPAVAGRHRIQG--IPAFIL 124 (155)
T ss_dssp EEECCHHHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTT--STHHHHHTTCCS--SSEEEE
T ss_pred CccCCHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCCEEEEEEeCCc--cHHHHHHcCCCc--CCEEEE
Confidence 677888888887766667777777553 2244 678899999999889999999986 567889999974 899998
Q ss_pred EecCCCe-eecCCCCCCHHHHHHHHHHHHcCC
Q 031686 120 ASIRKRK-KYVLNGELTLSNVKSFALDFLGDK 150 (155)
Q Consensus 120 ~~~~~~~-kY~~~~~~t~~~I~~Fi~~f~~Gk 150 (155)
+. .|+ .+.+.|..+.+.|.+|++..+..+
T Consensus 125 ~~--~G~~~~~~~G~~~~~~l~~~l~~~l~~~ 154 (155)
T 2ppt_A 125 FH--KGRELARAAGARPASELVGFVRGKLGAR 154 (155)
T ss_dssp EE--TTEEEEEEESCCCHHHHHHHHHHHHC--
T ss_pred Ee--CCeEEEEecCCCCHHHHHHHHHHHhccC
Confidence 85 243 334567789999999999988653
No 36
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=98.49 E-value=1.8e-06 Score=57.67 Aligned_cols=103 Identities=10% Similarity=0.051 Sum_probs=76.6
Q ss_pred CCCCeEecCCCchhhh-hcCCCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCc
Q 031686 39 KIPPMITYSRETTPLI-LNSPLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTS 114 (155)
Q Consensus 39 ~~P~v~e~~~~~~~~i-~~~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~ 114 (155)
.-+.+...+.+++.+. .+.+++.++.|.... .-.. ...+.++++++.+++.|+.+|.+. ...+.+.||+.. .
T Consensus 11 ~~~~~~~~~~~~f~~~v~~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~v~~~~vd~d~--~~~l~~~~~v~~--~ 86 (119)
T 1w4v_A 11 GSTTFNIQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDD--HTDLAIEYEVSA--V 86 (119)
T ss_dssp CCSEEECCSHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEETTT--THHHHHHTTCCS--S
T ss_pred CceEEEecChhhHHHHHHcCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCCC--CHHHHHHcCCCc--c
Confidence 3456778888888764 455566677776553 1244 667889999998889999999986 567889999974 8
Q ss_pred ceEEEEecCCCe-eecCCCCCCHHHHHHHHHHHH
Q 031686 115 RVIAVASIRKRK-KYVLNGELTLSNVKSFALDFL 147 (155)
Q Consensus 115 P~v~i~~~~~~~-kY~~~~~~t~~~I~~Fi~~f~ 147 (155)
|+++++. .|+ .+.+.|..+.+.|.+|+++++
T Consensus 87 Pt~~~~~--~G~~~~~~~G~~~~~~l~~~l~~~l 118 (119)
T 1w4v_A 87 PTVLAMK--NGDVVDKFVGIKDEDQLEAFLKKLI 118 (119)
T ss_dssp SEEEEEE--TTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred cEEEEEe--CCcEEEEEcCCCCHHHHHHHHHHHh
Confidence 9999884 343 334557779999999999875
No 37
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=98.47 E-value=1.9e-06 Score=59.01 Aligned_cols=105 Identities=15% Similarity=0.180 Sum_probs=77.8
Q ss_pred CCCeEecCCCchhhhhcC------------CCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhh
Q 031686 40 IPPMITYSRETTPLILNS------------PLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIF 104 (155)
Q Consensus 40 ~P~v~e~~~~~~~~i~~~------------~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~ 104 (155)
-+.+.+++.+++...... +.+.++.|.... .-.. ...+.++++++.+++.|+.+|.+. ...+.
T Consensus 21 ~~~v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~ 98 (141)
T 3hxs_A 21 QSGTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVDK--EPELA 98 (141)
T ss_dssp --CCEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEETTT--CHHHH
T ss_pred CCCcccccHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCceEEEEEECCC--CHHHH
Confidence 345777887777765554 556677776553 2344 778899999999899999999986 57889
Q ss_pred hhhCCCCCCcceEEEEecCCCeeecCCCCCCHHHHHHHHHHHHcC
Q 031686 105 DYFGVTCYTSRVIAVASIRKRKKYVLNGELTLSNVKSFALDFLGD 149 (155)
Q Consensus 105 ~~~gl~~~~~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~~G 149 (155)
+.||+.. +|++++++.. ++...+.|..+.+.|.+||+.++..
T Consensus 99 ~~~~v~~--~Pt~~~~~~~-g~~~~~~G~~~~~~l~~~l~~~l~k 140 (141)
T 3hxs_A 99 RDFGIQS--IPTIWFVPMK-GEPQVNMGALSKEQLKGYIDKVLLK 140 (141)
T ss_dssp HHTTCCS--SSEEEEECSS-SCCEEEESCCCHHHHHHHHHHTTC-
T ss_pred HHcCCCC--cCEEEEEeCC-CCEEEEeCCCCHHHHHHHHHHHHcc
Confidence 9999974 8999999754 3333445778999999999988754
No 38
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=98.47 E-value=2.6e-06 Score=54.96 Aligned_cols=99 Identities=12% Similarity=0.135 Sum_probs=73.0
Q ss_pred eEecCCCchhhhh-cCCCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCcceEE
Q 031686 43 MITYSRETTPLIL-NSPLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTSRVIA 118 (155)
Q Consensus 43 v~e~~~~~~~~i~-~~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~P~v~ 118 (155)
|..++.+++.... ..+.+.++.|.... .-.. ...+.++++++++++.|+.+|.+. ...+.+.+|+.. .|+++
T Consensus 2 v~~~~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~--~Pt~~ 77 (105)
T 1fb6_A 2 VQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDE--APGIATQYNIRS--IPTVL 77 (105)
T ss_dssp CEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTT--CHHHHHHTTCCS--SSEEE
T ss_pred ceechhhhHHHHHhcCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCceEEEEEcCcc--hHHHHHhCCCCc--ccEEE
Confidence 4678888888754 44556677776553 1244 677889999998889999999986 567889999874 89998
Q ss_pred EEecCCCe-eecCCCCCCHHHHHHHHHHHH
Q 031686 119 VASIRKRK-KYVLNGELTLSNVKSFALDFL 147 (155)
Q Consensus 119 i~~~~~~~-kY~~~~~~t~~~I~~Fi~~f~ 147 (155)
+.. .|+ ...+.|..+.+.+.+++++++
T Consensus 78 ~~~--~g~~~~~~~G~~~~~~l~~~l~~~l 105 (105)
T 1fb6_A 78 FFK--NGERKESIIGAVPKSTLTDSIEKYL 105 (105)
T ss_dssp EEE--TTEEEEEEEECCCHHHHHHHHHHHC
T ss_pred EEe--CCeEEEEEecCCCHHHHHHHHHhhC
Confidence 875 243 334456788999999998763
No 39
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=98.46 E-value=1.2e-06 Score=60.35 Aligned_cols=102 Identities=17% Similarity=0.202 Sum_probs=78.6
Q ss_pred CCeEecCCCchh-hhhcCCCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCcce
Q 031686 41 PPMITYSRETTP-LILNSPLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTSRV 116 (155)
Q Consensus 41 P~v~e~~~~~~~-~i~~~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~P~ 116 (155)
+.+.+++.+++. .+...+.+.++.|.... .-.. ...+.++|+++.+++.|+.+|.+. ...+.+.||+.. +|+
T Consensus 6 ~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~--~Pt 81 (140)
T 3hz4_A 6 SSIIEFEDMTWSQQVEDSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSSAVFGRINIAT--NPWTAEKYGVQG--TPT 81 (140)
T ss_dssp TTEEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTT--CHHHHHHHTCCE--ESE
T ss_pred cceEEcchHhHHHHHHhCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECCc--CHhHHHHCCCCc--CCE
Confidence 468889988888 56666666677776553 2244 678899999999999999999986 578889999974 899
Q ss_pred EEEEecCCCe-eecCCCCCCHHHHHHHHHHHHc
Q 031686 117 IAVASIRKRK-KYVLNGELTLSNVKSFALDFLG 148 (155)
Q Consensus 117 v~i~~~~~~~-kY~~~~~~t~~~I~~Fi~~f~~ 148 (155)
++++.. |+ .+.+.|..+.+.|.+|++.++.
T Consensus 82 ~~~~~~--G~~~~~~~G~~~~~~l~~~l~~~l~ 112 (140)
T 3hz4_A 82 FKFFCH--GRPVWEQVGQIYPSILKNAVRDMLQ 112 (140)
T ss_dssp EEEEET--TEEEEEEESSCCHHHHHHHHHHHHH
T ss_pred EEEEeC--CcEEEEEcCCCCHHHHHHHHHHHhc
Confidence 998852 43 3345677899999999998874
No 40
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=98.46 E-value=5.8e-06 Score=55.70 Aligned_cols=103 Identities=13% Similarity=0.105 Sum_probs=76.5
Q ss_pred CCCeEecCCCchhhhhc-CCCceEEEEeecC--ChhH-HHHHHHHHHhhc-----CceEEEEEeCCCcchhhhhhhhCCC
Q 031686 40 IPPMITYSRETTPLILN-SPLKLLWLFAAVH--DSEA-KSIFQETARAFK-----GKLLFVYSQIYPKLKGQIFDYFGVT 110 (155)
Q Consensus 40 ~P~v~e~~~~~~~~i~~-~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~-----~~i~F~~vd~~~~~~~~~~~~~gl~ 110 (155)
-+.|.+++.+++..... .+.+.++.|...- .-.. ...+.++|+++. +.+.|+.+|.+. +..+.+.||+.
T Consensus 14 ~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~--~~~l~~~~~v~ 91 (127)
T 3h79_A 14 PSRVVELTDETFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEK--YPDVIERMRVS 91 (127)
T ss_dssp CCCCEECCTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTT--CHHHHHHTTCC
T ss_pred CCceEECChhhHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccc--cHhHHHhcCCc
Confidence 34588999999998775 4556677776543 2234 667888887653 569999999996 67888999997
Q ss_pred CCCcceEEEEecCCC-eeecCCCCCCHHHHHHHHHHH
Q 031686 111 CYTSRVIAVASIRKR-KKYVLNGELTLSNVKSFALDF 146 (155)
Q Consensus 111 ~~~~P~v~i~~~~~~-~kY~~~~~~t~~~I~~Fi~~f 146 (155)
. +|++.+++.... ..+.+.|..+.++|.+||++.
T Consensus 92 ~--~Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 92 G--FPTMRYYTRIDKQEPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp S--SSEEEEECSSCSSSCEECCSCCCHHHHHHHHHHH
T ss_pred c--CCEEEEEeCCCCCCceEecCCccHHHHHHHHHhc
Confidence 4 899999975321 124567889999999999864
No 41
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=98.46 E-value=2.3e-06 Score=55.58 Aligned_cols=100 Identities=17% Similarity=0.167 Sum_probs=73.2
Q ss_pred eEecCCCchhhhh-cCCCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCcceEE
Q 031686 43 MITYSRETTPLIL-NSPLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTSRVIA 118 (155)
Q Consensus 43 v~e~~~~~~~~i~-~~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~P~v~ 118 (155)
|.+++.+++.... ..+++.++.|.... .-.. ...+.++++++.+++.|+.+|.+. ...+.+.+|+.. .|+++
T Consensus 3 v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~--~Pt~~ 78 (107)
T 1dby_A 3 AGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDE--SPNVASEYGIRS--IPTIM 78 (107)
T ss_dssp CEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTT--CHHHHHHHTCCS--SCEEE
T ss_pred cEeccHHHHHHHHhcCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCceEEEEEECCC--CHHHHHHCCCCc--CCEEE
Confidence 5667877877744 45556676776543 1244 677889999998889999999986 567889999874 89988
Q ss_pred EEecCCCeeecCCCCCCHHHHHHHHHHHH
Q 031686 119 VASIRKRKKYVLNGELTLSNVKSFALDFL 147 (155)
Q Consensus 119 i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~ 147 (155)
+.. ++...+.+.|..+.+.+.+++++++
T Consensus 79 ~~~-~G~~~~~~~G~~~~~~l~~~l~~~l 106 (107)
T 1dby_A 79 VFK-GGKKCETIIGAVPKATIVQTVEKYL 106 (107)
T ss_dssp EES-SSSEEEEEESCCCHHHHHHHHHHHC
T ss_pred EEe-CCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 874 2223344557788999999999875
No 42
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.44 E-value=3.7e-06 Score=56.47 Aligned_cols=106 Identities=10% Similarity=0.016 Sum_probs=80.3
Q ss_pred CCCeEecCCCchhhhhcCCCceEEEEeecC--ChhH-HHHHHHHHHhhcC-ceEEEEEeCCCcchhhhhhhhCCCCCCcc
Q 031686 40 IPPMITYSRETTPLILNSPLKLLWLFAAVH--DSEA-KSIFQETARAFKG-KLLFVYSQIYPKLKGQIFDYFGVTCYTSR 115 (155)
Q Consensus 40 ~P~v~e~~~~~~~~i~~~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~-~i~F~~vd~~~~~~~~~~~~~gl~~~~~P 115 (155)
-..+.+++.+++.++... +.++.|.... .-.. ...+.++|+++.+ ++.|+.+|.+. ...+.+.||+.. +|
T Consensus 6 ~~~v~~l~~~~f~~~~~~--~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~--~~~~~~~~~v~~--~P 79 (126)
T 1x5e_A 6 SGNVRVITDENWRELLEG--DWMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTE--QPGLSGRFIINA--LP 79 (126)
T ss_dssp CCSEEECCTTTHHHHTSS--EEEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTT--CHHHHHHTTCCS--SS
T ss_pred CCccEEecHHHHHHHhCC--CEEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcC--CHHHHHHcCCcc--cC
Confidence 345888999999987654 3555665443 2244 6778889998886 79999999986 567889999864 89
Q ss_pred eEEEEecCCCeeecCCCCCCHHHHHHHHHHHHcCCCcc
Q 031686 116 VIAVASIRKRKKYVLNGELTLSNVKSFALDFLGDKLRN 153 (155)
Q Consensus 116 ~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~~Gkl~p 153 (155)
+++++. .|+...+.|..+.+.|.+|+++.+...++|
T Consensus 80 t~~~~~--~G~~~~~~G~~~~~~l~~~l~~~~~~~~~~ 115 (126)
T 1x5e_A 80 TIYHCK--DGEFRRYQGPRTKKDFINFISDKEWKSIEP 115 (126)
T ss_dssp EEEEEE--TTEEEECCSCCCHHHHHHHHHTCGGGGSCE
T ss_pred EEEEEe--CCeEEEeecCCCHHHHHHHHHHHhhccCCC
Confidence 999884 355555677889999999999988766665
No 43
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=98.43 E-value=4.6e-06 Score=54.63 Aligned_cols=101 Identities=14% Similarity=0.130 Sum_probs=75.1
Q ss_pred CeEecCCCchhh-hhcCCCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCcceE
Q 031686 42 PMITYSRETTPL-ILNSPLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTSRVI 117 (155)
Q Consensus 42 ~v~e~~~~~~~~-i~~~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~P~v 117 (155)
.|.+++.+++.. +...+++.++.|.... .-.. ...+.++++++.+++.|+.+|.+. ...+.+.||+.. .|++
T Consensus 6 ~v~~l~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~--~Pt~ 81 (112)
T 1t00_A 6 TLKHVTDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDE--NPGTAAKYGVMS--IPTL 81 (112)
T ss_dssp CCEEECTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTT--CHHHHHHTTCCS--SSEE
T ss_pred eEEecchhhHHHHHhhCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCCeEEEEEEcCC--CHHHHHhCCCCc--ccEE
Confidence 367888888865 4455556677776553 1244 667889999998889999999986 567889999874 8999
Q ss_pred EEEecCCCe-eecCCCCCCHHHHHHHHHHHHc
Q 031686 118 AVASIRKRK-KYVLNGELTLSNVKSFALDFLG 148 (155)
Q Consensus 118 ~i~~~~~~~-kY~~~~~~t~~~I~~Fi~~f~~ 148 (155)
++.. .|+ .+.+.|..+.+.|.+|++.+++
T Consensus 82 ~~~~--~G~~~~~~~G~~~~~~l~~~l~~~l~ 111 (112)
T 1t00_A 82 NVYQ--GGEVAKTIVGAKPKAAIVRDLEDFIA 111 (112)
T ss_dssp EEEE--TTEEEEEEESCCCHHHHHHHTHHHHC
T ss_pred EEEe--CCEEEEEEeCCCCHHHHHHHHHHHhh
Confidence 8875 343 3445677889999999998865
No 44
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=98.42 E-value=1.1e-05 Score=58.57 Aligned_cols=116 Identities=15% Similarity=0.171 Sum_probs=85.5
Q ss_pred HHHHHHhCCCCCeEecCCCchhhhhcCC--CceEEEEeec---C--C----hhH-HHHHHHHHHhhc-----CceEEEEE
Q 031686 31 IDDFISLNKIPPMITYSRETTPLILNSP--LKLLWLFAAV---H--D----SEA-KSIFQETARAFK-----GKLLFVYS 93 (155)
Q Consensus 31 l~~fI~~~~~P~v~e~~~~~~~~i~~~~--~~~v~lf~~~---~--~----~~~-~~~~~~vA~~~~-----~~i~F~~v 93 (155)
+.+.+....-..|.++|.+|+.++...+ .++++.|... . . =.. .-.|.++|+++. +++.|+.+
T Consensus 8 ~~~l~~l~~~~~vi~lt~~nF~~~v~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kv 87 (178)
T 3ga4_A 8 IDDILQLKDDTGVITVTADNYPLLSRGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTV 87 (178)
T ss_dssp CHHHHTTCCTTSEEECCTTTHHHHTTCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEE
T ss_pred HHHHHHhhccCCCEECCHHHHHHHHcccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEE
Confidence 4455555556679999999999987543 3456666651 1 1 134 678999999998 88999999
Q ss_pred eCCCcchhhhhhhhCCCCCCcceEEEEecCCCe-------------eecCC-C-CCCHHHHHHHHHHHHcCC
Q 031686 94 QIYPKLKGQIFDYFGVTCYTSRVIAVASIRKRK-------------KYVLN-G-ELTLSNVKSFALDFLGDK 150 (155)
Q Consensus 94 d~~~~~~~~~~~~~gl~~~~~P~v~i~~~~~~~-------------kY~~~-~-~~t~~~I~~Fi~~f~~Gk 150 (155)
|.++ ++.+.+.||+.. +|++.++....+. .|.+. + ..+++.|.+||.+-..-+
T Consensus 88 D~d~--~~~la~~~~I~s--iPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~t~~~ 155 (178)
T 3ga4_A 88 DVNE--VPQLVKDLKLQN--VPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKILNIS 155 (178)
T ss_dssp ETTT--CHHHHHHTTCCS--SCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHHHTCC
T ss_pred ECcc--CHHHHHHcCCCC--CCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHhcCCC
Confidence 9997 789999999974 8999999864221 34444 4 688999999999865533
No 45
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=98.40 E-value=4.6e-06 Score=57.02 Aligned_cols=104 Identities=15% Similarity=0.196 Sum_probs=76.3
Q ss_pred CeEecCCCchhhhhc------------CCCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhh
Q 031686 42 PMITYSRETTPLILN------------SPLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDY 106 (155)
Q Consensus 42 ~v~e~~~~~~~~i~~------------~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~ 106 (155)
.+.+++.+++..... .+++.++.|.... .-.. ...+.++|+++++++.|+.+|.+. ...+.+.
T Consensus 10 ~v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~--~~~l~~~ 87 (136)
T 2l5l_A 10 KVIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQIVIYKVDTEK--EQELAGA 87 (136)
T ss_dssp SEEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTTCEEEEEETTT--CHHHHHH
T ss_pred ceEEecchHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCEEEEEEeCCC--CHHHHHH
Confidence 466677777766544 3456676776553 2244 677889999998889999999986 5678899
Q ss_pred hCCCCCCcceEEEEecCCCeeecCCCCCCHHHHHHHHHHHHcCC
Q 031686 107 FGVTCYTSRVIAVASIRKRKKYVLNGELTLSNVKSFALDFLGDK 150 (155)
Q Consensus 107 ~gl~~~~~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~~Gk 150 (155)
||+.. +|++++++.+ |+...+.|..+.+.|.+||+......
T Consensus 88 ~~v~~--~Pt~~~~~~~-G~~~~~~G~~~~~~l~~~l~~~~~~~ 128 (136)
T 2l5l_A 88 FGIRS--IPSILFIPME-GKPEMAQGAMPKASFKKAIDEFLLKK 128 (136)
T ss_dssp TTCCS--SCEEEEECSS-SCCEEEESCCCHHHHHHHHHHHHTSC
T ss_pred cCCCC--CCEEEEECCC-CcEEEEeCCCCHHHHHHHHHHHhhcc
Confidence 99874 8999999654 33323456789999999999987653
No 46
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=98.39 E-value=5.8e-06 Score=55.50 Aligned_cols=104 Identities=9% Similarity=0.071 Sum_probs=74.6
Q ss_pred eEecCCCchh-----hhhcCCCceEEEEeecC-C-hhH-HHHHHHHHHhhcCceEEEEEe--CCCcchhhhhhhhCCCCC
Q 031686 43 MITYSRETTP-----LILNSPLKLLWLFAAVH-D-SEA-KSIFQETARAFKGKLLFVYSQ--IYPKLKGQIFDYFGVTCY 112 (155)
Q Consensus 43 v~e~~~~~~~-----~i~~~~~~~v~lf~~~~-~-~~~-~~~~~~vA~~~~~~i~F~~vd--~~~~~~~~~~~~~gl~~~ 112 (155)
+..++.+++. .....+++.++.|.... . -.. ...+.++++++++++.|+.+| .+. ...+.+.||+..
T Consensus 6 ~~~l~~~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~d~--~~~~~~~~~v~~- 82 (126)
T 2l57_A 6 IKQINFQSINVVENLEEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREGKFNIYYARLEEEK--NIDLAYKYDANI- 82 (126)
T ss_dssp SSCTTTTCCSEESSTTTCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSSSCEEEEEETTSSH--HHHHHHHTTCCS-
T ss_pred cCCCCccccchhHHHHHHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcCCeEEEEEeCCCCc--hHHHHHHcCCcc-
Confidence 4555655555 44455666676676543 1 234 667889999998889999999 664 567889999864
Q ss_pred CcceEEEEecCCCeeecCCCCCCHHHHHHHHHHHHcCC
Q 031686 113 TSRVIAVASIRKRKKYVLNGELTLSNVKSFALDFLGDK 150 (155)
Q Consensus 113 ~~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~~Gk 150 (155)
+|++++++.++...+.+.|..+.+.|.++++......
T Consensus 83 -~Pt~~~~~~~G~~~~~~~G~~~~~~l~~~l~~~~~~~ 119 (126)
T 2l57_A 83 -VPTTVFLDKEGNKFYVHQGLMRKNNIETILNSLGVKE 119 (126)
T ss_dssp -SSEEEEECTTCCEEEEEESCCCHHHHHHHHHHHCCCC
T ss_pred -eeEEEEECCCCCEEEEecCCCCHHHHHHHHHHHhccc
Confidence 8999999854333444567789999999999987554
No 47
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=98.39 E-value=2.7e-06 Score=56.45 Aligned_cols=106 Identities=12% Similarity=0.054 Sum_probs=76.7
Q ss_pred CCCCCeEecCCCchhhh-hcCCCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCC
Q 031686 38 NKIPPMITYSRETTPLI-LNSPLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYT 113 (155)
Q Consensus 38 ~~~P~v~e~~~~~~~~i-~~~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~ 113 (155)
..-..+.+++.+++... ...+.+.++.|.... .-.. ...+.++|+++.+++.|+.+|.+. ...+.+.+|+..
T Consensus 9 ~~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~i~~-- 84 (121)
T 2i1u_A 9 SEKSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDT--NPETARNFQVVS-- 84 (121)
T ss_dssp ---CCSEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTT--CHHHHHHTTCCS--
T ss_pred hhcccceecCHHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEECCC--CHHHHHhcCCCc--
Confidence 33455788999888754 455666677776553 2244 677899999998889999999986 567889999874
Q ss_pred cceEEEEecCCCe-eecCCCCCCHHHHHHHHHHHHcC
Q 031686 114 SRVIAVASIRKRK-KYVLNGELTLSNVKSFALDFLGD 149 (155)
Q Consensus 114 ~P~v~i~~~~~~~-kY~~~~~~t~~~I~~Fi~~f~~G 149 (155)
.|+++++. .|+ .+.+.|..+.+.|.+|++..+.+
T Consensus 85 ~Pt~~~~~--~g~~~~~~~G~~~~~~l~~~l~~~l~~ 119 (121)
T 2i1u_A 85 IPTLILFK--DGQPVKRIVGAKGKAALLRELSDVVPN 119 (121)
T ss_dssp SSEEEEEE--TTEEEEEEESCCCHHHHHHHTCSCCCC
T ss_pred CCEEEEEE--CCEEEEEecCCCCHHHHHHHHHHHHhh
Confidence 89998886 343 33455778899999999876543
No 48
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=98.38 E-value=3.4e-06 Score=55.51 Aligned_cols=102 Identities=12% Similarity=0.104 Sum_probs=77.4
Q ss_pred CeEecCCCchhhhhcCCCceEEEEeecC--ChhH-HHHHHHHHHhhc---CceEEEEEeCCCcchhhhhhhhCCCCCCcc
Q 031686 42 PMITYSRETTPLILNSPLKLLWLFAAVH--DSEA-KSIFQETARAFK---GKLLFVYSQIYPKLKGQIFDYFGVTCYTSR 115 (155)
Q Consensus 42 ~v~e~~~~~~~~i~~~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~---~~i~F~~vd~~~~~~~~~~~~~gl~~~~~P 115 (155)
.+.+++.+++......+.+.++.|.... .-.. ...+.+++++++ ..+.|+.+|.+. ...+.+.+|+.. .|
T Consensus 8 ~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~--~~~~~~~~~v~~--~P 83 (120)
T 1mek_A 8 HVLVLRKSNFAEALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATE--ESDLAQQYGVRG--YP 83 (120)
T ss_dssp TEEECCTTTHHHHHHHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTT--CCSSHHHHTCCS--SS
T ss_pred CcEEechhhHHHHHccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCC--CHHHHHHCCCCc--cc
Confidence 4788999999998887777777776653 2234 677888998886 368999999986 457888999874 89
Q ss_pred eEEEEecCCCee---ecCCCCCCHHHHHHHHHHHHcC
Q 031686 116 VIAVASIRKRKK---YVLNGELTLSNVKSFALDFLGD 149 (155)
Q Consensus 116 ~v~i~~~~~~~k---Y~~~~~~t~~~I~~Fi~~f~~G 149 (155)
+++++.. |+. ..+.|..+.+.|.+|+++.++.
T Consensus 84 t~~~~~~--g~~~~~~~~~g~~~~~~l~~~l~~~~~~ 118 (120)
T 1mek_A 84 TIKFFRN--GDTASPKEYTAGREADDIVNWLKKRTGP 118 (120)
T ss_dssp EEEEEES--SCSSSCEECCCCSSHHHHHHHHHTTSCC
T ss_pred EEEEEeC--CCcCCcccccCccCHHHHHHHHHhccCC
Confidence 9998853 322 4556778999999999887654
No 49
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=98.38 E-value=7.2e-06 Score=60.84 Aligned_cols=108 Identities=17% Similarity=0.160 Sum_probs=83.4
Q ss_pred CCCeEecCCCchhh-hhcCCCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCcc
Q 031686 40 IPPMITYSRETTPL-ILNSPLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTSR 115 (155)
Q Consensus 40 ~P~v~e~~~~~~~~-i~~~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~P 115 (155)
-+.+..+|.+++.. +..++++.++.|...- .-.. ...+.++|+++++++.|+.+|.+. ...+.+.||+.. +|
T Consensus 11 ~~~~~~lt~~~f~~~v~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~--~~~l~~~~~v~~--~P 86 (222)
T 3dxb_A 11 SDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQ--NPGTAPKYGIRG--IP 86 (222)
T ss_dssp SCCCEECCTTTHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTT--CTTTGGGGTCCS--BS
T ss_pred CCCceeCCHHHHHHHHHhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCcEEEEEECCC--CHHHHHHcCCCc--CC
Confidence 35678899999987 5666666777777553 2244 778999999999889999999986 567889999974 89
Q ss_pred eEEEEecCCCe-eecCCCCCCHHHHHHHHHHHHcCCCcc
Q 031686 116 VIAVASIRKRK-KYVLNGELTLSNVKSFALDFLGDKLRN 153 (155)
Q Consensus 116 ~v~i~~~~~~~-kY~~~~~~t~~~I~~Fi~~f~~Gkl~p 153 (155)
++++++. |+ ...+.|..+.+.|.+|+++.+.+...+
T Consensus 87 t~~~~~~--G~~~~~~~G~~~~~~l~~~l~~~l~~~~~~ 123 (222)
T 3dxb_A 87 TLLLFKN--GEVAATKVGALSKGQLKEFLDANLAGSAME 123 (222)
T ss_dssp EEEEEET--TEEEEEEESCCCHHHHHHHHHHHSCCSCCB
T ss_pred EEEEEEC--CeEEEEeccccChHHHHHHHHhhccccccc
Confidence 9999862 43 334457789999999999999876543
No 50
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=98.33 E-value=7.6e-06 Score=52.77 Aligned_cols=97 Identities=8% Similarity=0.027 Sum_probs=71.2
Q ss_pred eEecCC-Cchhhhhc--CCCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCcce
Q 031686 43 MITYSR-ETTPLILN--SPLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTSRV 116 (155)
Q Consensus 43 v~e~~~-~~~~~i~~--~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~P~ 116 (155)
|.+++. +++..... .+.+.++.|.... .-.. ...+.++++++++++.|+.+|.+. ...+.+.+|+.. .|+
T Consensus 2 v~~l~~~~~~~~~l~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~--~Pt 77 (106)
T 1xwb_A 2 VYQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDE--CEDIAMEYNISS--MPT 77 (106)
T ss_dssp EEECCSHHHHHHHHHHHTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTT--CHHHHHHTTCCS--SSE
T ss_pred ceecCCHHHHHHHHHhcCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCCCeEEEEEeccc--hHHHHHHcCCCc--ccE
Confidence 566776 77777776 5556676776653 2244 677889999998889999999986 567889999874 899
Q ss_pred EEEEecCCCe-eecCCCCCCHHHHHHHHHHH
Q 031686 117 IAVASIRKRK-KYVLNGELTLSNVKSFALDF 146 (155)
Q Consensus 117 v~i~~~~~~~-kY~~~~~~t~~~I~~Fi~~f 146 (155)
+++.. .|+ ...+.| .+.+.|.+|++++
T Consensus 78 ~~~~~--~G~~~~~~~g-~~~~~l~~~i~~~ 105 (106)
T 1xwb_A 78 FVFLK--NGVKVEEFAG-ANAKRLEDVIKAN 105 (106)
T ss_dssp EEEEE--TTEEEEEEES-CCHHHHHHHHHHT
T ss_pred EEEEc--CCcEEEEEcC-CCHHHHHHHHHHh
Confidence 88875 243 233445 6889999999875
No 51
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=98.33 E-value=1.8e-06 Score=58.42 Aligned_cols=100 Identities=18% Similarity=0.187 Sum_probs=67.0
Q ss_pred eEecCCCchhh-hhcCCCceEEEEeec--C--------------ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhh
Q 031686 43 MITYSRETTPL-ILNSPLKLLWLFAAV--H--------------DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIF 104 (155)
Q Consensus 43 v~e~~~~~~~~-i~~~~~~~v~lf~~~--~--------------~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~ 104 (155)
+.+++.+++.. +...+++.++.|... . .-.. ...+.++++++.+++.|+.+|.+. ...+.
T Consensus 5 v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~~~~~~vd~d~--~~~l~ 82 (123)
T 1oaz_A 5 IIHLTDDSFDTDVLKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGKLTVAKLNIDQ--NPGTA 82 (123)
T ss_dssp CEECCSTTHHHHTTSCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC-------CEEEEEETTS--CTTTG
T ss_pred cEecChhhHHHHHHhCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCCeEEEEEECCC--CHHHH
Confidence 67889899874 445666667777654 2 2233 567888888888889999999986 56788
Q ss_pred hhhCCCCCCcceEEEEecCCCeeecCCCCCCHHHHHHHHHHHH
Q 031686 105 DYFGVTCYTSRVIAVASIRKRKKYVLNGELTLSNVKSFALDFL 147 (155)
Q Consensus 105 ~~~gl~~~~~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~ 147 (155)
+.+|+.. +|+++++. ++.....+.|..+.++|.+|++..+
T Consensus 83 ~~~~v~~--~Pt~~~~~-~G~~~~~~~G~~~~~~l~~~l~~~l 122 (123)
T 1oaz_A 83 PKYGIRG--IPTLLLFK-NGEVAATKVGALSKGQLKEFLDANL 122 (123)
T ss_dssp GGGTCCB--SSEEEEEE-SSSEEEEEESCCCHHHHHHHHTTTC
T ss_pred HHcCCCc--cCEEEEEE-CCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 9999975 89999884 3222334567788999999997653
No 52
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=98.33 E-value=6.6e-06 Score=60.43 Aligned_cols=107 Identities=16% Similarity=0.160 Sum_probs=82.4
Q ss_pred CCeEecCCCchhhhhcCCCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCcceE
Q 031686 41 PPMITYSRETTPLILNSPLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTSRVI 117 (155)
Q Consensus 41 P~v~e~~~~~~~~i~~~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~P~v 117 (155)
+.+..++.+++......+.+.++.|...- .-.. ...+.++|+++.+++.|+.+|.+. ...+.+.+|+.. +|++
T Consensus 97 ~~v~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~--~Pt~ 172 (210)
T 3apq_A 97 PEIITLERREFDAAVNSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGLLRIGAVNCGD--DRMLCRMKGVNS--YPSL 172 (210)
T ss_dssp TTSEECCHHHHHHHHHHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTT--CHHHHHHTTCCS--SSEE
T ss_pred CceEEecHHHHHHHHccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcCceEEEEEECCc--cHHHHHHcCCCc--CCeE
Confidence 45778888888877777777777777653 2244 678899999999889999999986 567889999974 8999
Q ss_pred EEEecCCCeeecCCCCCCHHHHHHHHHHHHcCCCc
Q 031686 118 AVASIRKRKKYVLNGELTLSNVKSFALDFLGDKLR 152 (155)
Q Consensus 118 ~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~~Gkl~ 152 (155)
+++. .+.....+.|..+.+.|.+|++..+...+.
T Consensus 173 ~~~~-~G~~~~~~~G~~~~~~l~~~i~~~l~~~~~ 206 (210)
T 3apq_A 173 FIFR-SGMAAVKYNGDRSKESLVAFAMQHVRSTVT 206 (210)
T ss_dssp EEEC-TTSCCEECCSCCCHHHHHHHHHHHHHCCSS
T ss_pred EEEE-CCCceeEecCCCCHHHHHHHHHHhCcccce
Confidence 9883 222234566788999999999999877654
No 53
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=98.30 E-value=3.9e-06 Score=55.87 Aligned_cols=102 Identities=16% Similarity=0.096 Sum_probs=75.3
Q ss_pred eEecCCCchh-hhhcCCCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCcceEE
Q 031686 43 MITYSRETTP-LILNSPLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTSRVIA 118 (155)
Q Consensus 43 v~e~~~~~~~-~i~~~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~P~v~ 118 (155)
+.+++.+++. .+...+.+.++.|.... .-.. ...+.++|+++.+++.|+.+|.+. ...+.+.||+.. +|+++
T Consensus 5 v~~l~~~~f~~~~~~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~--~~~~~~~~~v~~--~Pt~~ 80 (122)
T 3aps_A 5 SIDLTPQTFNEKVLQGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDCQA--YPQTCQKAGIKA--YPSVK 80 (122)
T ss_dssp SEECCHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTT--CHHHHHHTTCCS--SSEEE
T ss_pred hhcCCHHHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCcC--CHHHHHHcCCCc--cceEE
Confidence 6778888884 46666666777776553 2244 678889999999889999999986 567889999974 89999
Q ss_pred EEecCCCeeecCCC----CCCHHHHHHHHHHHHcC
Q 031686 119 VASIRKRKKYVLNG----ELTLSNVKSFALDFLGD 149 (155)
Q Consensus 119 i~~~~~~~kY~~~~----~~t~~~I~~Fi~~f~~G 149 (155)
+++.. +....+.| ..+.+.|.+|++..++.
T Consensus 81 ~~~~~-~~~~~~~g~~~~~~~~~~l~~~l~~~l~~ 114 (122)
T 3aps_A 81 LYQYE-RAKKSIWEEQINSRDAKTIAALIYGKLET 114 (122)
T ss_dssp EEEEE-GGGTEEEEEEECCSCHHHHHHHHHHHHHC
T ss_pred EEeCC-CccceeeccccCcCCHHHHHHHHHHHHHh
Confidence 98753 22222223 37999999999998753
No 54
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=98.29 E-value=7.1e-06 Score=53.59 Aligned_cols=99 Identities=15% Similarity=0.221 Sum_probs=72.1
Q ss_pred eEec-CCCchhhhhcC----CCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCc
Q 031686 43 MITY-SRETTPLILNS----PLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTS 114 (155)
Q Consensus 43 v~e~-~~~~~~~i~~~----~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~ 114 (155)
+.++ +.+++...... +++.++.|.... .-.. ...+.++++++.+++.|+.+|.+. ...+.+.||+.. +
T Consensus 4 v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~--~~~~~~~~~v~~--~ 79 (112)
T 1ep7_A 4 VIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDA--VAAVAEAAGITA--M 79 (112)
T ss_dssp EEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTT--THHHHHHHTCCB--S
T ss_pred EEEecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCCCeEEEEEECCc--hHHHHHHcCCCc--c
Confidence 5566 34667766654 566677776553 1244 667889999998889999999986 567889999874 8
Q ss_pred ceEEEEecCCCe-eecCCCCCCHHHHHHHHHHHHc
Q 031686 115 RVIAVASIRKRK-KYVLNGELTLSNVKSFALDFLG 148 (155)
Q Consensus 115 P~v~i~~~~~~~-kY~~~~~~t~~~I~~Fi~~f~~ 148 (155)
|++++.. .|+ .+.+.|. +.+.|.+|++.+++
T Consensus 80 Pt~~~~~--~G~~~~~~~G~-~~~~l~~~l~~~l~ 111 (112)
T 1ep7_A 80 PTFHVYK--DGVKADDLVGA-SQDKLKALVAKHAA 111 (112)
T ss_dssp SEEEEEE--TTEEEEEEESC-CHHHHHHHHHHHHC
T ss_pred cEEEEEE--CCeEEEEEcCC-CHHHHHHHHHHHhc
Confidence 9988775 243 3344566 89999999998875
No 55
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=98.29 E-value=5.9e-06 Score=55.00 Aligned_cols=99 Identities=11% Similarity=0.120 Sum_probs=72.7
Q ss_pred CCeEecCCCchhhhhc--CCCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCcc
Q 031686 41 PPMITYSRETTPLILN--SPLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTSR 115 (155)
Q Consensus 41 P~v~e~~~~~~~~i~~--~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~P 115 (155)
+.....+.+++.++.. .+++.++.|...- .-.. ...+.++|+++.+ +.|+.+|.+. ...+.+.||+.. +|
T Consensus 12 ~~~~~~t~~~f~~~l~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-v~~~~vd~d~--~~~l~~~~~v~~--~P 86 (116)
T 3qfa_C 12 SVKQIESKTAFQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN-VIFLEVDVDD--CQDVASECEVKS--MP 86 (116)
T ss_dssp CCBCCCCHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT-SEEEEEETTT--THHHHHHTTCCS--SS
T ss_pred cccCCCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCC--CHHHHHHcCCcc--cc
Confidence 4455566777888777 6666777776553 2244 6788899999877 9999999986 678889999974 89
Q ss_pred eEEEEecCCCeeecCCCCCCHHHHHHHHHHH
Q 031686 116 VIAVASIRKRKKYVLNGELTLSNVKSFALDF 146 (155)
Q Consensus 116 ~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f 146 (155)
+++++. .+.....+.|. +.+.|.++++++
T Consensus 87 t~~~~~-~G~~~~~~~G~-~~~~l~~~l~~~ 115 (116)
T 3qfa_C 87 TFQFFK-KGQKVGEFSGA-NKEKLEATINEL 115 (116)
T ss_dssp EEEEES-SSSEEEEEESC-CHHHHHHHHHHH
T ss_pred EEEEEe-CCeEEEEEcCC-CHHHHHHHHHHh
Confidence 999884 22233344566 899999999875
No 56
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=98.28 E-value=1.6e-05 Score=51.55 Aligned_cols=98 Identities=10% Similarity=0.077 Sum_probs=73.6
Q ss_pred CeEecCCCchhhhhcCCCceEEEEeecC--ChhH-HHHHHHHHHhhc---CceEEEEEeCCCcchhhhhhhhCCCCCCcc
Q 031686 42 PMITYSRETTPLILNSPLKLLWLFAAVH--DSEA-KSIFQETARAFK---GKLLFVYSQIYPKLKGQIFDYFGVTCYTSR 115 (155)
Q Consensus 42 ~v~e~~~~~~~~i~~~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~---~~i~F~~vd~~~~~~~~~~~~~gl~~~~~P 115 (155)
.+.++|.+++..... +.+.++.|.... .-.. ...+.++|+++. ..+.|+.+|.+. ...+.+.||+.. +|
T Consensus 6 ~v~~l~~~~~~~~~~-~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~--~~~l~~~~~v~~--~P 80 (111)
T 3uvt_A 6 TVLALTENNFDDTIA-EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTA--ERNICSKYSVRG--YP 80 (111)
T ss_dssp CSEECCTTTHHHHHH-SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTT--CHHHHHHTTCCS--SS
T ss_pred cceEcChhhHHHHhc-CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccc--cHhHHHhcCCCc--cc
Confidence 478899999998887 446666676553 2244 678888998875 469999999986 578889999974 89
Q ss_pred eEEEEecCCCeeecCCCCCCHHHHHHHHHH
Q 031686 116 VIAVASIRKRKKYVLNGELTLSNVKSFALD 145 (155)
Q Consensus 116 ~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~ 145 (155)
+++++.. +.....+.|..+.+.|.+|+++
T Consensus 81 t~~~~~~-g~~~~~~~g~~~~~~l~~~l~~ 109 (111)
T 3uvt_A 81 TLLLFRG-GKKVSEHSGGRDLDSLHRFVLS 109 (111)
T ss_dssp EEEEEET-TEEEEEECSCCSHHHHHHHHHH
T ss_pred EEEEEeC-CcEEEeccCCcCHHHHHHHHHh
Confidence 9998853 2223445677899999999976
No 57
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=98.27 E-value=2.4e-05 Score=57.83 Aligned_cols=105 Identities=10% Similarity=0.073 Sum_probs=83.1
Q ss_pred CCeEecCCCchhhhhcCCCceEEEEeecC--ChhH-HHHHHHHHHhhcCc---eEEEEEeCCCcchhhhhhhhCCCCCCc
Q 031686 41 PPMITYSRETTPLILNSPLKLLWLFAAVH--DSEA-KSIFQETARAFKGK---LLFVYSQIYPKLKGQIFDYFGVTCYTS 114 (155)
Q Consensus 41 P~v~e~~~~~~~~i~~~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~---i~F~~vd~~~~~~~~~~~~~gl~~~~~ 114 (155)
..|.+++.+++......+.+.++.|...- .-.. ...+.++|+++++. +.|+.+|.+. ...+.+.||+.. +
T Consensus 15 ~~v~~l~~~~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~--~~~l~~~~~v~~--~ 90 (241)
T 3idv_A 15 NGVLVLNDANFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATS--ASVLASRFDVSG--Y 90 (241)
T ss_dssp TTEEEECTTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTT--CHHHHHHTTCCS--S
T ss_pred CCcEEecccCHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccC--CHHHHHhcCCCc--C
Confidence 45888999999998888877777776553 2244 67889999988876 9999999986 578889999974 8
Q ss_pred ceEEEEecCCCeeecCCCCCCHHHHHHHHHHHHcCCC
Q 031686 115 RVIAVASIRKRKKYVLNGELTLSNVKSFALDFLGDKL 151 (155)
Q Consensus 115 P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~~Gkl 151 (155)
|++++++. |+...+.|..+.+.|.+|+........
T Consensus 91 Pt~~~~~~--g~~~~~~g~~~~~~l~~~i~~~~~~~~ 125 (241)
T 3idv_A 91 PTIKILKK--GQAVDYEGSRTQEEIVAKVREVSQPDW 125 (241)
T ss_dssp SEEEEEET--TEEEECCSCSCHHHHHHHHHHHHSTTC
T ss_pred CEEEEEcC--CCcccccCcccHHHHHHHHhhccCccc
Confidence 99999873 444456678999999999999887643
No 58
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=98.27 E-value=1.3e-05 Score=54.31 Aligned_cols=100 Identities=15% Similarity=0.128 Sum_probs=75.3
Q ss_pred CeEecCC-CchhhhhcCCCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCcceE
Q 031686 42 PMITYSR-ETTPLILNSPLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTSRVI 117 (155)
Q Consensus 42 ~v~e~~~-~~~~~i~~~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~P~v 117 (155)
.+.+++. +++......+.+.++.|.... .-.. ...+.++++++. ++.|+.+|.+. ...+.+.||+.. +|++
T Consensus 20 mv~~l~~~~~f~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-~v~~~~vd~d~--~~~l~~~~~v~~--~Pt~ 94 (125)
T 1r26_A 20 SVVDVYSVEQFRNIMSEDILTVAWFTAVWCGPCKTIERPMEKIAYEFP-TVKFAKVDADN--NSEIVSKCRVLQ--LPTF 94 (125)
T ss_dssp CCEEECCHHHHHHHHHSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT-TSEEEEEETTT--CHHHHHHTTCCS--SSEE
T ss_pred ceEECCCHHHHHHHHccCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC-CCEEEEEECCC--CHHHHHHcCCCc--ccEE
Confidence 4788888 888888877777777777553 2244 667888999884 59999999986 567889999874 8998
Q ss_pred EEEecCCCe-eecCCCCCCHHHHHHHHHHHHcC
Q 031686 118 AVASIRKRK-KYVLNGELTLSNVKSFALDFLGD 149 (155)
Q Consensus 118 ~i~~~~~~~-kY~~~~~~t~~~I~~Fi~~f~~G 149 (155)
+++. .|+ ...+.| .+.+.|.+||+.++..
T Consensus 95 ~i~~--~G~~~~~~~G-~~~~~l~~~l~~~l~~ 124 (125)
T 1r26_A 95 IIAR--SGKMLGHVIG-ANPGMLRQKLRDIIKD 124 (125)
T ss_dssp EEEE--TTEEEEEEES-SCHHHHHHHHHHHHHC
T ss_pred EEEe--CCeEEEEEeC-CCHHHHHHHHHHHhcC
Confidence 8874 243 233445 6889999999998753
No 59
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=98.25 E-value=1.2e-05 Score=64.45 Aligned_cols=119 Identities=12% Similarity=0.091 Sum_probs=74.6
Q ss_pred eccCCcCHHHHHHHHHhCCCCCeEecCC-CchhhhhcCCCceEEEEeecCChhHHHHHHHHHHhhcCceEEEEEeCCCcc
Q 031686 21 FSDVSFTISVIDDFISLNKIPPMITYSR-ETTPLILNSPLKLLWLFAAVHDSEAKSIFQETARAFKGKLLFVYSQIYPKL 99 (155)
Q Consensus 21 ~y~g~~~~~~l~~fI~~~~~P~v~e~~~-~~~~~i~~~~~~~v~lf~~~~~~~~~~~~~~vA~~~~~~i~F~~vd~~~~~ 99 (155)
.|.|.++.+.|.+||.+..-|.+.+++. +.+.. +....+.++.|+...+....+.|.++|..+++++.|+.+..+
T Consensus 98 ~~~G~~~~~~l~~~i~~~~~~~v~~l~~~~~l~~-l~~~~~~~v~ff~~~~~~~~~~f~~~A~~~~~~~~F~~~~~~--- 173 (382)
T 2r2j_A 98 EYRGQRSVKALADYIRQQKSDPIQEIRDLAEITT-LDRSKRNIIGYFEQKDSDNYRVFERVANILHDDCAFLSAFGD--- 173 (382)
T ss_dssp ECCSCCSHHHHHHHHHHHHSCCCEEC-------------CCEEEEEESCSSSHHHHHHHHHHHHHTTTCEEEEEESC---
T ss_pred eecCcchHHHHHHHHHHhccCCceecCCHHHHHH-hcCCCCEEEEEECCCCChhHHHHHHHHHHhhccceEEEEehh---
Confidence 5899999999999999999999999964 55666 555556566776554322267899999999999998887653
Q ss_pred hhhhhhhhCCCCCCcceEEEEecC-CCeeecCCCCC-CHHHHHHHHHHHHcC
Q 031686 100 KGQIFDYFGVTCYTSRVIAVASIR-KRKKYVLNGEL-TLSNVKSFALDFLGD 149 (155)
Q Consensus 100 ~~~~~~~~gl~~~~~P~v~i~~~~-~~~kY~~~~~~-t~~~I~~Fi~~f~~G 149 (155)
+.+.+|++. .| ++..... ......++|++ +.++|.+||+...-.
T Consensus 174 ---~~~~~~v~~--~p-i~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p 219 (382)
T 2r2j_A 174 ---VSKPERYSG--DN-IIYKPPGHSAPDMVYLGAMTNFDVTYNWIQDKCVP 219 (382)
T ss_dssp ---C----------CE-EEEECSSSSSCCEECCSCTTCHHHHHHHHHHHHSC
T ss_pred ---hHHhhCCCC--Cc-eEECCCCCCCcCcccCCCCCCHHHHHHHHHhcccC
Confidence 345566653 57 5444331 12234567788 899999999986543
No 60
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=98.24 E-value=5.5e-06 Score=61.32 Aligned_cols=120 Identities=11% Similarity=0.020 Sum_probs=89.9
Q ss_pred EeccCCcCHHHHHHHHHhCC--CCCeEecCCCchhhhhcCCCce-EEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEE
Q 031686 20 IFSDVSFTISVIDDFISLNK--IPPMITYSRETTPLILNSPLKL-LWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYS 93 (155)
Q Consensus 20 ~~y~g~~~~~~l~~fI~~~~--~P~v~e~~~~~~~~i~~~~~~~-v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~v 93 (155)
..|.|..+.+++.+|+.... -+.+.+++.+++..+...+.+. ++.|.... .-.. ...+.++|+++ +++.|+.+
T Consensus 95 ~~~~G~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~-~~v~~~~v 173 (229)
T 2ywm_A 95 IRYIGLPAGLEFTTLINGIFHVSQRKPQLSEKTLELLQVVDIPIEIWVFVTTSCGYCPSAAVMAWDFALAN-DYITSKVI 173 (229)
T ss_dssp EEEESCCCTTHHHHHHHHHHHHHTTCCSCCHHHHHHHTTCCSCEEEEEEECTTCTTHHHHHHHHHHHHHHC-TTEEEEEE
T ss_pred ceecCCccHHHHHHHHHHHHhccCCccCCCHHHHHHHHhcCCCeEEEEEECCCCcchHHHHHHHHHHHHHC-CCeEEEEE
Confidence 45778888899999988742 1346778888888877666677 55576553 2244 67888899988 57999999
Q ss_pred eCCCcchhhhhhhhCCCCCCcceEEEEecCCCeeecCCCCCCHHHHHHHHHHHHc
Q 031686 94 QIYPKLKGQIFDYFGVTCYTSRVIAVASIRKRKKYVLNGELTLSNVKSFALDFLG 148 (155)
Q Consensus 94 d~~~~~~~~~~~~~gl~~~~~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~~ 148 (155)
|.+. +..+.+.||+.. +|++++ + |+...+.|..+.+.|.+|++..+.
T Consensus 174 d~~~--~~~l~~~~~v~~--~Pt~~~-~---G~~~~~~G~~~~~~l~~~l~~~~~ 220 (229)
T 2ywm_A 174 DASE--NQDLAEQFQVVG--VPKIVI-N---KGVAEFVGAQPENAFLGYIMAVYE 220 (229)
T ss_dssp EGGG--CHHHHHHTTCCS--SSEEEE-G---GGTEEEESCCCHHHHHHHHHHHHH
T ss_pred ECCC--CHHHHHHcCCcc--cCEEEE-C---CEEEEeeCCCCHHHHHHHHHHHhh
Confidence 9986 577889999974 899988 3 333334577889999999998764
No 61
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=98.23 E-value=1.5e-05 Score=51.15 Aligned_cols=96 Identities=9% Similarity=0.066 Sum_probs=68.3
Q ss_pred EecCC-Cchhhhhc--CCCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCcceE
Q 031686 44 ITYSR-ETTPLILN--SPLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTSRVI 117 (155)
Q Consensus 44 ~e~~~-~~~~~i~~--~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~P~v 117 (155)
.+++. +++..... .+++.++.|.... .-.. ...+.++++++. ++.|+.+|.+. ...+.+.+|+.. .|++
T Consensus 2 ~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~--~~~~~~~~~v~~--~Pt~ 76 (104)
T 2vim_A 2 RVLATAADLEKLINENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP-EVEFAKVDVDQ--NEEAAAKYSVTA--MPTF 76 (104)
T ss_dssp EECCSHHHHHHHHHTTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTT--CHHHHHHTTCCS--SSEE
T ss_pred eecCCHHHHHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC-CCEEEEEeccC--CHHHHHHcCCcc--ccEE
Confidence 45555 66777776 4556666676553 2244 667888998886 69999999986 567889999864 8999
Q ss_pred EEEecCCCe-eecCCCCCCHHHHHHHHHHHH
Q 031686 118 AVASIRKRK-KYVLNGELTLSNVKSFALDFL 147 (155)
Q Consensus 118 ~i~~~~~~~-kY~~~~~~t~~~I~~Fi~~f~ 147 (155)
++.+ .|+ .....| .+.+.|.+|+++++
T Consensus 77 ~~~~--~g~~~~~~~G-~~~~~l~~~l~~~l 104 (104)
T 2vim_A 77 VFIK--DGKEVDRFSG-ANETKLRETITRHK 104 (104)
T ss_dssp EEEE--TTEEEEEEES-SCHHHHHHHHHHHC
T ss_pred EEEe--CCcEEEEEeC-CCHHHHHHHHHhhC
Confidence 8886 243 233445 68999999998763
No 62
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=98.22 E-value=1.3e-05 Score=53.69 Aligned_cols=101 Identities=11% Similarity=0.090 Sum_probs=74.6
Q ss_pred CCCeEecCC-CchhhhhcCCCceEEEEeecC--ChhH-HHHHHHHHHhhcCc-eEEEEEeCCCcchhhhhhhhCCCCCCc
Q 031686 40 IPPMITYSR-ETTPLILNSPLKLLWLFAAVH--DSEA-KSIFQETARAFKGK-LLFVYSQIYPKLKGQIFDYFGVTCYTS 114 (155)
Q Consensus 40 ~P~v~e~~~-~~~~~i~~~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~-i~F~~vd~~~~~~~~~~~~~gl~~~~~ 114 (155)
.+.+.+++. +++....+.+++.++.|.... .-.. ...+.++++++.++ +.|+.+|.+. ...+.+.+|+.. +
T Consensus 14 ~~~~~~i~~~~~f~~~l~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~--~~~~~~~~~v~~--~ 89 (121)
T 2j23_A 14 RGSVQVISSYDQFKQVTGGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDE--QSQIAQEVGIRA--M 89 (121)
T ss_dssp CCCEEECCSHHHHHHHHSSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTT--CHHHHHHHTCCS--S
T ss_pred CcceEEcCCHHHHHHHHcCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcC--CHHHHHHcCCCc--c
Confidence 345666765 778888877777777776553 2344 67788899988876 9999999986 567889999874 8
Q ss_pred ceEEEEecCCCe-eecCCCCCCHHHHHHHHHHHH
Q 031686 115 RVIAVASIRKRK-KYVLNGELTLSNVKSFALDFL 147 (155)
Q Consensus 115 P~v~i~~~~~~~-kY~~~~~~t~~~I~~Fi~~f~ 147 (155)
|+++++. .|+ .+.+.|. +.+.|.+|+++.+
T Consensus 90 Pt~~~~~--~G~~~~~~~G~-~~~~l~~~l~~~l 120 (121)
T 2j23_A 90 PTFVFFK--NGQKIDTVVGA-DPSKLQAAITQHS 120 (121)
T ss_dssp SEEEEEE--TTEEEEEEESS-CHHHHHHHHHHHT
T ss_pred cEEEEEE--CCeEEeeEcCC-CHHHHHHHHHHhh
Confidence 9998885 243 3344555 8999999999875
No 63
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=98.22 E-value=2.1e-05 Score=62.04 Aligned_cols=117 Identities=14% Similarity=0.122 Sum_probs=86.2
Q ss_pred CCcCHHHHHHHHHhCC------------------CCCeEecCCCchhhhh-cCCCceEEEEeecC--ChhH-HHHHHHHH
Q 031686 24 VSFTISVIDDFISLNK------------------IPPMITYSRETTPLIL-NSPLKLLWLFAAVH--DSEA-KSIFQETA 81 (155)
Q Consensus 24 g~~~~~~l~~fI~~~~------------------~P~v~e~~~~~~~~i~-~~~~~~v~lf~~~~--~~~~-~~~~~~vA 81 (155)
|.++.++|.+|++... -..|..++.+++..+. ..+++.++.|...- .-.. ...+.++|
T Consensus 214 ~~~~~~~l~~fi~~~l~g~~~~~~~s~~~p~~~~~~~v~~l~~~~f~~~~~~~~k~~lv~f~a~wC~~C~~~~p~~~~la 293 (361)
T 3uem_A 214 EELTAERITEFCHRFLEGKIKPHLMSQELPEDWDKQPVKVLVGKNFEDVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLG 293 (361)
T ss_dssp CCCCHHHHHHHHHHHHTTCSCCCCBCCCCCTTTTTSSSEEECTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHHHhcCCCcccccCCCCCcccccCCcEEeecCchhhhcccCCCcEEEEEecCcCHhHHHHHHHHHHHH
Confidence 7899999999998731 1237788888988876 35555577776553 2344 67899999
Q ss_pred HhhcCc--eEEEEEeCCCcchhhhhhhhCCCCCCcceEEEEecCCC-eeecCCCCCCHHHHHHHHHHH
Q 031686 82 RAFKGK--LLFVYSQIYPKLKGQIFDYFGVTCYTSRVIAVASIRKR-KKYVLNGELTLSNVKSFALDF 146 (155)
Q Consensus 82 ~~~~~~--i~F~~vd~~~~~~~~~~~~~gl~~~~~P~v~i~~~~~~-~kY~~~~~~t~~~I~~Fi~~f 146 (155)
++++++ +.|+.+|.+.. . .+.+|+.+ +|++.++...++ ....+.|..+.+.|.+||++-
T Consensus 294 ~~~~~~~~v~~~~vd~~~~--~--~~~~~v~~--~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~ 355 (361)
T 3uem_A 294 ETYKDHENIVIAKMDSTAN--E--VEAVKVHS--FPTLKFFPASADRTVIDYNGERTLDGFKKFLESG 355 (361)
T ss_dssp HHTTTCSSEEEEEEETTTC--B--CSSCCCCS--SSEEEEECSSSSCCCEECCSCSSHHHHHHHHTTT
T ss_pred HHhccCCcEEEEEEECCcc--c--hhhcCCcc--cCeEEEEECCCCcceeEecCCCCHHHHHHHHHhc
Confidence 999875 99999999852 2 56778864 899999964323 235567889999999999754
No 64
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=98.21 E-value=5.5e-06 Score=56.68 Aligned_cols=102 Identities=11% Similarity=0.080 Sum_probs=73.9
Q ss_pred HHhCCCCCeEe--cC-CCchhhhhcCCCceEEEEeecCChhHHHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCC
Q 031686 35 ISLNKIPPMIT--YS-RETTPLILNSPLKLLWLFAAVHDSEAKSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTC 111 (155)
Q Consensus 35 I~~~~~P~v~e--~~-~~~~~~i~~~~~~~v~lf~~~~~~~~~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~ 111 (155)
+++.+.|.... ++ .+.++.+.+.....++.|+...+.+..+.|.++|+.+ +++.|+.++.. .+++.+|++
T Consensus 13 m~kq~gP~~~~~~i~s~~e~e~fi~~~~v~VVGfF~~~~~~~~~~F~~~A~~~-~d~~F~~t~~~-----~v~~~~~v~- 85 (124)
T 2l4c_A 13 SSDGPGAAQEPTWLTDVPAAMEFIAATEVAVIGFFQDLEIPAVPILHSMVQKF-PGVSFGISTDS-----EVLTHYNIT- 85 (124)
T ss_dssp SCCCSCCSCCCEECCSHHHHHHHHHTSSEEEEEECSCTTSTHHHHHHHHHHHC-TTSEEEEECCH-----HHHHHTTCC-
T ss_pred HHhccCCCCcceEcCCHHHHHHHHhcCCCEEEEEECCCCChhHHHHHHHHHhC-CCceEEEEChH-----HHHHHcCCC-
Confidence 34667788755 64 4567777776655588888664433377899999999 88999988543 578889987
Q ss_pred CCcceEEEEecCCCeeecCCC----CCCHHHHHHHHHH
Q 031686 112 YTSRVIAVASIRKRKKYVLNG----ELTLSNVKSFALD 145 (155)
Q Consensus 112 ~~~P~v~i~~~~~~~kY~~~~----~~t~~~I~~Fi~~ 145 (155)
.|+++++..-...+-.+++ +++.+.|.+||+.
T Consensus 86 --~~~vvlfkkfde~~~~~~g~~~~~~~~~~L~~FI~~ 121 (124)
T 2l4c_A 86 --GNTICLFRLVDNEQLNLEDEDIESIDATKLSRFIEI 121 (124)
T ss_dssp --SSCEEEEETTTTEEEEECHHHHTTCCHHHHHHHHHH
T ss_pred --CCeEEEEEcCCCCceeecCcccCCCCHHHHHHHHHH
Confidence 6889999863323333454 6899999999985
No 65
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.20 E-value=1.2e-05 Score=54.17 Aligned_cols=109 Identities=16% Similarity=0.179 Sum_probs=78.1
Q ss_pred CCCeEecCCCchhhhhcC-CCceEEEEeecC-C-hhH-HHHHHHHHHhhc--CceEEEEEeCCCcchhhhhhhhCCCCCC
Q 031686 40 IPPMITYSRETTPLILNS-PLKLLWLFAAVH-D-SEA-KSIFQETARAFK--GKLLFVYSQIYPKLKGQIFDYFGVTCYT 113 (155)
Q Consensus 40 ~P~v~e~~~~~~~~i~~~-~~~~v~lf~~~~-~-~~~-~~~~~~vA~~~~--~~i~F~~vd~~~~~~~~~~~~~gl~~~~ 113 (155)
-+.|.+++.+++...... +.+.++.|.... . -.. ...|.++|++++ +++.|+.+|.+. ...+.+.||+..
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~--~~~~~~~~~v~~-- 81 (133)
T 2dj3_A 6 SGPVKVVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATA--NDITNDQYKVEG-- 81 (133)
T ss_dssp SCSSEECCTTTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTT--SCCCCSSCCCSS--
T ss_pred CCceEEEcCCCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCc--CHHHHhhcCCCc--
Confidence 456888999888876654 555566776543 2 244 667899999987 569999999885 456667788864
Q ss_pred cceEEEEecCCC-eeecCC-CCCCHHHHHHHHHHHHcCCCc
Q 031686 114 SRVIAVASIRKR-KKYVLN-GELTLSNVKSFALDFLGDKLR 152 (155)
Q Consensus 114 ~P~v~i~~~~~~-~kY~~~-~~~t~~~I~~Fi~~f~~Gkl~ 152 (155)
+|++++++.... ....+. +..+.+.|.+||+..+.....
T Consensus 82 ~Pt~~~~~~g~~~~~~~~~gg~~~~~~l~~~l~~~~~~~~~ 122 (133)
T 2dj3_A 82 FPTIYFAPSGDKKNPIKFEGGNRDLEHLSKFIDEHATKRSR 122 (133)
T ss_dssp SSEEEEECTTCTTSCEECCSSCCSTTHHHHHHHHHSSSCSS
T ss_pred CCEEEEEeCCCcccceEecCCCcCHHHHHHHHHHhcccccC
Confidence 899999875321 122345 568999999999998876543
No 66
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=98.19 E-value=1.4e-05 Score=51.47 Aligned_cols=98 Identities=9% Similarity=0.113 Sum_probs=69.2
Q ss_pred eEecC-CCchhhhhc--CCCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCcce
Q 031686 43 MITYS-RETTPLILN--SPLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTSRV 116 (155)
Q Consensus 43 v~e~~-~~~~~~i~~--~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~P~ 116 (155)
+.+++ .+++..... .+++.++.|.... .-.. ...+.++|+++.+ +.|+.+|.+. ...+.+.+|+.. .|+
T Consensus 2 v~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~vd~~~--~~~~~~~~~v~~--~Pt 76 (105)
T 3m9j_A 2 VKQIESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN-VIFLEVDVDD--CQDVASESEVKS--MPT 76 (105)
T ss_dssp CEECCSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT-SEEEEEETTT--CHHHHHHTTCCB--SSE
T ss_pred eEEcCCHHHHHHHHHhcCCCeEEEEEECCCChhhHHHHHHHHHHHHHccC-eEEEEEEhhh--hHHHHHHcCCCc--CcE
Confidence 34453 456666666 5556676776553 2344 6788899999876 9999999986 578889999974 899
Q ss_pred EEEEecCCCeeecCCCCCCHHHHHHHHHHHH
Q 031686 117 IAVASIRKRKKYVLNGELTLSNVKSFALDFL 147 (155)
Q Consensus 117 v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~ 147 (155)
++++.. +.....+.|. +.+.|.+|+++.+
T Consensus 77 ~~~~~~-g~~~~~~~g~-~~~~l~~~l~~~l 105 (105)
T 3m9j_A 77 FQFFKK-GQKVGEFSGA-NKEKLEATINELV 105 (105)
T ss_dssp EEEEET-TEEEEEEESS-CHHHHHHHHHHHC
T ss_pred EEEEEC-CeEEEEEeCC-CHHHHHHHHHHhC
Confidence 999853 2223334556 8999999998753
No 67
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=98.19 E-value=9.7e-06 Score=54.71 Aligned_cols=101 Identities=7% Similarity=0.074 Sum_probs=71.6
Q ss_pred CCCeEecCCCchhhhhcCCCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCcce
Q 031686 40 IPPMITYSRETTPLILNSPLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTSRV 116 (155)
Q Consensus 40 ~P~v~e~~~~~~~~i~~~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~P~ 116 (155)
.|.+...+.+........+++.++.|...- .-.. ...+.++++++++++.|+.+|.+. ...+.+.||+.. +|+
T Consensus 24 ~~~~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~vd~d~--~~~l~~~~~v~~--~Pt 99 (128)
T 3ul3_B 24 VPRLQQNGSNIINGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKRIYLLKVDLDK--NESLARKFSVKS--LPT 99 (128)
T ss_dssp --CCCCCCCSSSSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGEEEEEEEGGG--CHHHHHHTTCCS--SSE
T ss_pred CCccccCCccHHHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCC--CHHHHHHcCCCC--cCE
Confidence 444544555555555566666677776553 2244 678899999998889999999986 578889999974 899
Q ss_pred EEEEecCCCeeecCCCCCCHHHHHHHHHH
Q 031686 117 IAVASIRKRKKYVLNGELTLSNVKSFALD 145 (155)
Q Consensus 117 v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~ 145 (155)
+++++ ++.....+.|..+.++|.+|+++
T Consensus 100 ~~~~~-~G~~~~~~~G~~~~~~l~~~l~~ 127 (128)
T 3ul3_B 100 IILLK-NKTMLARKDHFVSSNDLIALIKK 127 (128)
T ss_dssp EEEEE-TTEEEEEESSCCCHHHHHHHHTT
T ss_pred EEEEE-CCEEEEEecCCCCHHHHHHHHHh
Confidence 99985 22223445677899999999864
No 68
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=98.18 E-value=1.8e-05 Score=52.62 Aligned_cols=102 Identities=13% Similarity=0.118 Sum_probs=74.1
Q ss_pred CCCeEecCCCchhhhhcC----CCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCC
Q 031686 40 IPPMITYSRETTPLILNS----PLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCY 112 (155)
Q Consensus 40 ~P~v~e~~~~~~~~i~~~----~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~ 112 (155)
.|.+...+.+++...... +++.++.|.... .-.. ...+.++++++.+ +.|+.+|.+. ...+.+.||+..
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~vd~~~--~~~~~~~~~v~~- 87 (122)
T 2vlu_A 12 AEVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN-AVFLKVDVDE--LKPIAEQFSVEA- 87 (122)
T ss_dssp CCCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTT--CHHHHHHTTCCS-
T ss_pred CcceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-cEEEEEECCC--CHHHHHHcCCCc-
Confidence 456677777777776653 556677776543 1234 6678899999887 9999999986 567889999874
Q ss_pred CcceEEEEecCCCe-eecCCCCCCHHHHHHHHHHHHcC
Q 031686 113 TSRVIAVASIRKRK-KYVLNGELTLSNVKSFALDFLGD 149 (155)
Q Consensus 113 ~~P~v~i~~~~~~~-kY~~~~~~t~~~I~~Fi~~f~~G 149 (155)
+|++++.. .|+ .+.+.|.. .+.|.+|++..+.+
T Consensus 88 -~Pt~~~~~--~G~~~~~~~G~~-~~~l~~~l~~~l~~ 121 (122)
T 2vlu_A 88 -MPTFLFMK--EGDVKDRVVGAI-KEELTAKVGLHAAA 121 (122)
T ss_dssp -SSEEEEEE--TTEEEEEEESSC-HHHHHHHHHHHHSC
T ss_pred -ccEEEEEe--CCEEEEEEeCcC-HHHHHHHHHHHhcc
Confidence 89988874 343 33445655 99999999998764
No 69
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=98.18 E-value=1.3e-05 Score=59.08 Aligned_cols=123 Identities=13% Similarity=-0.006 Sum_probs=89.2
Q ss_pred EeccCCcCHHHHHHHHHhCCC--CCeEecCCCchhhhhcCCCce-EEEEeecC--ChhH-HHHHHHHHHhhc----CceE
Q 031686 20 IFSDVSFTISVIDDFISLNKI--PPMITYSRETTPLILNSPLKL-LWLFAAVH--DSEA-KSIFQETARAFK----GKLL 89 (155)
Q Consensus 20 ~~y~g~~~~~~l~~fI~~~~~--P~v~e~~~~~~~~i~~~~~~~-v~lf~~~~--~~~~-~~~~~~vA~~~~----~~i~ 89 (155)
..|.|..+.+++.+|+..... .....++.+++..+...+.+. ++.|...- .-.. ...+.++|+++. +++.
T Consensus 93 ~~~~G~~~~~~l~~~l~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~ 172 (226)
T 1a8l_A 93 VRYFGLPAGHEFAAFLEDIVDVSREETNLMDETKQAIRNIDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKIL 172 (226)
T ss_dssp EEEESCCCTTHHHHHHHHHHHHHHTCCCCCHHHHHHHTTCCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEE
T ss_pred EEEeccCcHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHhcCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEE
Confidence 456777778888998876321 124567777777776677777 77776553 2244 677888999887 6899
Q ss_pred EEEEeCCCcchhhhhhhhCCCCCCcceEEEEecCCCeeecCCCCCCHHHHHHHHHHHH
Q 031686 90 FVYSQIYPKLKGQIFDYFGVTCYTSRVIAVASIRKRKKYVLNGELTLSNVKSFALDFL 147 (155)
Q Consensus 90 F~~vd~~~~~~~~~~~~~gl~~~~~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~ 147 (155)
|+.+|.+. +..+.+.||+.. +|+++++.. +.....+.|..+.+.|.+|++..+
T Consensus 173 ~~~vd~~~--~~~l~~~~~v~~--~Pt~~~~~~-G~~~~~~~G~~~~~~l~~~l~~~l 225 (226)
T 1a8l_A 173 GDMVEAIE--YPEWADQYNVMA--VPKIVIQVN-GEDRVEFEGAYPEKMFLEKLLSAL 225 (226)
T ss_dssp EEEEEGGG--CHHHHHHTTCCS--SCEEEEEET-TEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEEEEccc--CHHHHHhCCCcc--cCeEEEEeC-CceeEEEcCCCCHHHHHHHHHHhh
Confidence 99999986 567889999974 899988762 222334567788999999998875
No 70
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=98.17 E-value=4.2e-05 Score=50.56 Aligned_cols=102 Identities=14% Similarity=0.155 Sum_probs=74.6
Q ss_pred CCeEecCCCchhhhh-cCCCceEEEEeecC--ChhH-HHHHHHHHHhhcC-----ceEEEEEeCCCcchhhhhhhhCCCC
Q 031686 41 PPMITYSRETTPLIL-NSPLKLLWLFAAVH--DSEA-KSIFQETARAFKG-----KLLFVYSQIYPKLKGQIFDYFGVTC 111 (155)
Q Consensus 41 P~v~e~~~~~~~~i~-~~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~-----~i~F~~vd~~~~~~~~~~~~~gl~~ 111 (155)
+.|.+++.+++.... ..+.+.++.|...- .-.. ...+.++|+++++ .+.|+.+|.+.. .+.+ ++.
T Consensus 7 ~~v~~l~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~---~~~~--~v~- 80 (121)
T 2djj_A 7 GPVTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAN---DVPD--EIQ- 80 (121)
T ss_dssp CSSEECCTTTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTS---CCSS--CCS-
T ss_pred CCeEEecccCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECccc---cccc--ccC-
Confidence 457889999988764 55666677776553 2344 6788999999987 799999999852 2334 664
Q ss_pred CCcceEEEEecCCCe--eecCCCCCCHHHHHHHHHHHHcCC
Q 031686 112 YTSRVIAVASIRKRK--KYVLNGELTLSNVKSFALDFLGDK 150 (155)
Q Consensus 112 ~~~P~v~i~~~~~~~--kY~~~~~~t~~~I~~Fi~~f~~Gk 150 (155)
.+|++++++.. ++ ...+.|..+.+.|.+|+++....+
T Consensus 81 -~~Pt~~~~~~~-~~~~~~~~~G~~~~~~l~~~i~~~~~~~ 119 (121)
T 2djj_A 81 -GFPTIKLYPAG-AKGQPVTYSGSRTVEDLIKFIAENGKYK 119 (121)
T ss_dssp -SSSEEEEECSS-CTTSCCCCCCCSCHHHHHHHHHHTSSSC
T ss_pred -cCCeEEEEeCc-CCCCceEecCCCCHHHHHHHHHhccCcC
Confidence 48999999853 22 445567889999999999876543
No 71
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=98.15 E-value=9.8e-06 Score=52.66 Aligned_cols=94 Identities=9% Similarity=0.016 Sum_probs=59.8
Q ss_pred CCCchhhhhcCCCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCcceEEEEecC
Q 031686 47 SRETTPLILNSPLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTSRVIAVASIR 123 (155)
Q Consensus 47 ~~~~~~~i~~~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~P~v~i~~~~ 123 (155)
|.+++......+.+.++.|...- .-.. ...+.++|+++ +++.|+.+|.+. ...+.+.||+.. +|++++++
T Consensus 7 ~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~-~~~~~~~vd~~~--~~~l~~~~~v~~--~Pt~~~~~-- 79 (105)
T 4euy_A 7 TIEELATYIEEQQLVLLFIKTENCGVCDVMLRKVNYVLENY-NYVEKIEILLQD--MQEIAGRYAVFT--GPTVLLFY-- 79 (105)
T ss_dssp ---CCSSSTTCSSEEEEEEEESSCHHHHHHHHHHHHHHHTC-TTEEEEEEEECC--C---------CC--CCEEEEEE--
T ss_pred CHHHHHHHHhcCCCEEEEEeCCCCcchHHHHHHHHHHHHHc-CCceEEEEECCC--CHHHHHhcCCCC--CCEEEEEe--
Confidence 34566666666666677776653 2244 67888999988 479999999986 567888999874 89999986
Q ss_pred CCe-eecCCCCCCHHHHHHHHHHHH
Q 031686 124 KRK-KYVLNGELTLSNVKSFALDFL 147 (155)
Q Consensus 124 ~~~-kY~~~~~~t~~~I~~Fi~~f~ 147 (155)
.|+ ...+.|..+.+.|.++++.++
T Consensus 80 ~G~~~~~~~g~~~~~~l~~~l~~~~ 104 (105)
T 4euy_A 80 NGKEILRESRFISLENLERTIQLFE 104 (105)
T ss_dssp TTEEEEEEESSCCHHHHHHHHHTTC
T ss_pred CCeEEEEEeCCcCHHHHHHHHHHhh
Confidence 243 334456779999999998764
No 72
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.14 E-value=3.2e-05 Score=59.07 Aligned_cols=103 Identities=11% Similarity=0.209 Sum_probs=79.2
Q ss_pred CCCCeEecCCCchhhhhcC--CCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCC
Q 031686 39 KIPPMITYSRETTPLILNS--PLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYT 113 (155)
Q Consensus 39 ~~P~v~e~~~~~~~~i~~~--~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~ 113 (155)
..|.|.++|.+++..+... ++++++.|...- .-.. ...+.++++++.+++.|+.+|.+. ...+.+.||+..
T Consensus 5 ~~~~v~~~~~~~f~~~~~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~--~~~~~~~~~v~~-- 80 (287)
T 3qou_A 5 SVENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDA--EQMIAAQFGLRA-- 80 (287)
T ss_dssp -CTTEEECCTTTHHHHHTTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSSSEEEEEETTT--CHHHHHTTTCCS--
T ss_pred CCCccEECCHHHHHHHHHhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCCeEEEEEeCcc--CHHHHHHcCCCC--
Confidence 3577999999999998864 566677776552 2344 678899999999899999999986 578889999974
Q ss_pred cceEEEEecCCCe-eecCCCCCCHHHHHHHHHHHH
Q 031686 114 SRVIAVASIRKRK-KYVLNGELTLSNVKSFALDFL 147 (155)
Q Consensus 114 ~P~v~i~~~~~~~-kY~~~~~~t~~~I~~Fi~~f~ 147 (155)
+|++.++. .|+ ...+.|..+.+.+.+|+...+
T Consensus 81 ~Pt~~~~~--~G~~~~~~~g~~~~~~l~~~l~~~l 113 (287)
T 3qou_A 81 IPTVYLFQ--NGQPVDGFQGPQPEEAIRALLDXVL 113 (287)
T ss_dssp SSEEEEEE--TTEEEEEEESCCCHHHHHHHHHHHS
T ss_pred CCeEEEEE--CCEEEEEeeCCCCHHHHHHHHHHHc
Confidence 89999885 243 223456778999999998875
No 73
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=98.11 E-value=4.8e-05 Score=50.19 Aligned_cols=95 Identities=12% Similarity=0.202 Sum_probs=69.7
Q ss_pred eEecCC-Cchhhhhc--CCCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCcce
Q 031686 43 MITYSR-ETTPLILN--SPLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTSRV 116 (155)
Q Consensus 43 v~e~~~-~~~~~i~~--~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~P~ 116 (155)
+.+++. +++..... .+++.++.|.... .-.. ...+.++|+++ ++.|+.+|.+. ...+.+.+|+.. +|+
T Consensus 15 v~~l~~~~~~~~~l~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~--~~~~~~vd~~~--~~~~~~~~~v~~--~Pt 88 (117)
T 2xc2_A 15 LIELKQDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY--DAIFVKVDVDK--LEETARKYNISA--MPT 88 (117)
T ss_dssp EEECCSTTHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS--SSEEEEEETTT--SHHHHHHTTCCS--SSE
T ss_pred eEEeCCHHHHHHHHHhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc--CcEEEEEECCc--cHHHHHHcCCCc--cce
Confidence 778887 88887777 5666676676553 2244 66788888888 79999999986 567889999874 899
Q ss_pred EEEEecCCCe-eecCCCCCCHHHHHHHHHHH
Q 031686 117 IAVASIRKRK-KYVLNGELTLSNVKSFALDF 146 (155)
Q Consensus 117 v~i~~~~~~~-kY~~~~~~t~~~I~~Fi~~f 146 (155)
+++.. .|+ ...+.| .+.+.|.++++++
T Consensus 89 ~~~~~--~G~~~~~~~G-~~~~~l~~~l~~~ 116 (117)
T 2xc2_A 89 FIAIK--NGEKVGDVVG-ASIAKVEDMIKKF 116 (117)
T ss_dssp EEEEE--TTEEEEEEES-SCHHHHHHHHHHH
T ss_pred EEEEe--CCcEEEEEeC-CCHHHHHHHHHHh
Confidence 88875 243 233345 6889999999875
No 74
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=98.10 E-value=2.3e-05 Score=59.27 Aligned_cols=103 Identities=15% Similarity=0.151 Sum_probs=73.0
Q ss_pred hCCCCCeEecC-CCchhhhhcCCCceEEEEeecCChhHHHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCcc
Q 031686 37 LNKIPPMITYS-RETTPLILNSPLKLLWLFAAVHDSEAKSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTSR 115 (155)
Q Consensus 37 ~~~~P~v~e~~-~~~~~~i~~~~~~~v~lf~~~~~~~~~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~P 115 (155)
.++.|.+.+++ .+.+..+.+.....++.|+...+.+..+.|.++|..+|+++.|+.+.. ..+++.++++ .|
T Consensus 2 ~~~gP~v~~l~s~~~~~~~l~~~~v~vvgff~~~~~~~~~~f~~~A~~lr~~~~F~~~~~-----~~v~~~~~~~---~p 73 (252)
T 2h8l_A 2 PLGSPASVPLRTEEEFKKFISDKDASIVGFFDDSFSEAHSEFLKAASNLRDNYRFAHTNV-----ESLVNEYDDN---GE 73 (252)
T ss_dssp ----CCEEECCSHHHHHHHHTSSSCEEEEEESCTTSHHHHHHHHHHHHTTTTSCEEEECC-----HHHHHHHCSS---SE
T ss_pred CcCCCCceeecCHHHHHHHhhcCCeEEEEEECCCCChHHHHHHHHHHhcccCcEEEEECh-----HHHHHHhCCC---CC
Confidence 35689999996 466777776665557777765432336799999999999999988743 3578888987 39
Q ss_pred eEEEEecC------CCeeecC-CCCCCHHHHHHHHHHHH
Q 031686 116 VIAVASIR------KRKKYVL-NGELTLSNVKSFALDFL 147 (155)
Q Consensus 116 ~v~i~~~~------~~~kY~~-~~~~t~~~I~~Fi~~f~ 147 (155)
++++.... ......+ +|+++.+.|.+||+.-.
T Consensus 74 ~i~~fk~~~~~~kf~e~~~~y~~g~~~~~~l~~fi~~~~ 112 (252)
T 2h8l_A 74 GIILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENI 112 (252)
T ss_dssp EEEEECCGGGCCTTSCSEEECCCSSCCHHHHHHHHHHHS
T ss_pred cEEEEcchhhcccccccccccCCCCcCHHHHHHHHHhcc
Confidence 99888742 1223345 77899999999999854
No 75
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=98.09 E-value=4.8e-05 Score=52.95 Aligned_cols=105 Identities=15% Similarity=0.135 Sum_probs=74.8
Q ss_pred HHhCCCCCeEecCCCchhhhhcCCC-ceEEEEeecC----ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhC
Q 031686 35 ISLNKIPPMITYSRETTPLILNSPL-KLLWLFAAVH----DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFG 108 (155)
Q Consensus 35 I~~~~~P~v~e~~~~~~~~i~~~~~-~~v~lf~~~~----~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~g 108 (155)
+.++.+| ++|.+++........ |.++.|...- .-.. .-.+.++|++|.+++.|+.+|.++ +..+...||
T Consensus 12 ~~~~g~~---~vt~~~F~~~v~~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~v~~~KVdvDe--~~~la~~yg 86 (137)
T 2qsi_A 12 ARPNAPT---LVDEATVDDFIAHSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPGRLVAAEVAAEA--ERGLMARFG 86 (137)
T ss_dssp -----CE---EECTTTHHHHHHTSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTTEEEEEECGGG--HHHHHHHHT
T ss_pred HHhcCCc---ccCHhHHHHHHhcCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccCCcEEEEEECCC--CHHHHHHcC
Confidence 3444444 678888887665554 6666665432 1233 557889999999999999999996 788999999
Q ss_pred CCCCCcceEEEEecCCCe-eecCCCCCCHHHHHHHHHHHHc
Q 031686 109 VTCYTSRVIAVASIRKRK-KYVLNGELTLSNVKSFALDFLG 148 (155)
Q Consensus 109 l~~~~~P~v~i~~~~~~~-kY~~~~~~t~~~I~~Fi~~f~~ 148 (155)
+.. +|+++++.. |+ .-.+.|-.+.+.|.++|+.+++
T Consensus 87 V~s--iPTlilFkd--G~~v~~~vG~~~k~~l~~~l~~~l~ 123 (137)
T 2qsi_A 87 VAV--CPSLAVVQP--ERTLGVIAKIQDWSSYLAQIGAMLA 123 (137)
T ss_dssp CCS--SSEEEEEEC--CEEEEEEESCCCHHHHHHHHHHHHH
T ss_pred Ccc--CCEEEEEEC--CEEEEEEeCCCCHHHHHHHHHHHhc
Confidence 974 899999973 42 2234466788899999998773
No 76
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=98.08 E-value=2.3e-05 Score=51.45 Aligned_cols=98 Identities=14% Similarity=0.176 Sum_probs=71.7
Q ss_pred CeEecCCCchhhhhcCCCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCcceEE
Q 031686 42 PMITYSRETTPLILNSPLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTSRVIA 118 (155)
Q Consensus 42 ~v~e~~~~~~~~i~~~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~P~v~ 118 (155)
.....+.+++......+++.++.|.... .-.. ...+.++++++. ++.|+.+|.+. ...+.+.+|+.. +|+++
T Consensus 10 ~~~~~~~~~f~~~~~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~-~v~~~~vd~~~--~~~~~~~~~v~~--~Pt~~ 84 (112)
T 1syr_A 10 VKIVTSQAEFDSIISQNELVIVDFFAEWCGPCKRIAPFYEECSKTYT-KMVFIKVDVDE--VSEVTEKENITS--MPTFK 84 (112)
T ss_dssp CEEECSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTT--THHHHHHTTCCS--SSEEE
T ss_pred EEEECCHHHHHHHHccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC-CCEEEEEECCC--CHHHHHHcCCCc--ccEEE
Confidence 3455677888888877766777776553 2244 677888998886 49999999986 567888999864 89988
Q ss_pred EEecCCCe-eecCCCCCCHHHHHHHHHHHH
Q 031686 119 VASIRKRK-KYVLNGELTLSNVKSFALDFL 147 (155)
Q Consensus 119 i~~~~~~~-kY~~~~~~t~~~I~~Fi~~f~ 147 (155)
+.. .|+ .+.+.|. +.+.|.+|+++++
T Consensus 85 ~~~--~G~~~~~~~G~-~~~~l~~~l~~~l 111 (112)
T 1syr_A 85 VYK--NGSSVDTLLGA-NDSALKQLIEKYA 111 (112)
T ss_dssp EEE--TTEEEEEEESC-CHHHHHHHHHTTC
T ss_pred EEE--CCcEEEEEeCC-CHHHHHHHHHHhh
Confidence 875 243 3344566 8999999998754
No 77
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=98.07 E-value=0.00015 Score=47.22 Aligned_cols=103 Identities=8% Similarity=0.093 Sum_probs=71.9
Q ss_pred CCCeEecCCCchhhhhcC--CCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCc
Q 031686 40 IPPMITYSRETTPLILNS--PLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTS 114 (155)
Q Consensus 40 ~P~v~e~~~~~~~~i~~~--~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~ 114 (155)
...|.+++.+++...... +++.++.|.... .-.. ...+.++++++.+ +.|+.+|.+.. ...+.+.||+.. +
T Consensus 4 ~~~v~~l~~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~-v~~~~vd~~~~-~~~~~~~~~v~~--~ 79 (111)
T 2pu9_C 4 VGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLD-VIFLKLDCNQE-NKTLAKELGIRV--V 79 (111)
T ss_dssp TTSEEEECTTTHHHHHTTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEECSST-THHHHHHHCCSB--S
T ss_pred cCccEEechHHHHHHHHhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCCC-eEEEEEecCcc-hHHHHHHcCCCe--e
Confidence 345888999999887763 556666676543 2244 6678889998875 99999998731 567889999974 8
Q ss_pred ceEEEEecCCCeeecCCCCCCHHHHHHHHHHHHc
Q 031686 115 RVIAVASIRKRKKYVLNGELTLSNVKSFALDFLG 148 (155)
Q Consensus 115 P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~~ 148 (155)
|++++.. ++.....+.|. +.+.|.++++++++
T Consensus 80 Pt~~~~~-~G~~~~~~~G~-~~~~l~~~l~~~~~ 111 (111)
T 2pu9_C 80 PTFKILK-ENSVVGEVTGA-KYDKLLEAIQAARS 111 (111)
T ss_dssp SEEEEES-SSSEEEEEESS-CHHHHHHHHHHHHC
T ss_pred eEEEEEe-CCcEEEEEcCC-CHHHHHHHHHHhhC
Confidence 9976653 22222333443 58899999998753
No 78
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=98.07 E-value=1.6e-05 Score=60.18 Aligned_cols=102 Identities=12% Similarity=0.137 Sum_probs=72.6
Q ss_pred CCCCCeEecCC-CchhhhhcC-CCceEEEEeecCChhHHHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCcc
Q 031686 38 NKIPPMITYSR-ETTPLILNS-PLKLLWLFAAVHDSEAKSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTSR 115 (155)
Q Consensus 38 ~~~P~v~e~~~-~~~~~i~~~-~~~~v~lf~~~~~~~~~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~P 115 (155)
.+.|.|.+++. +.++.+.+. ....++.|+...+.+..+.|.++|..+|+++.|+.+... .+++.+|++. |
T Consensus 3 ~~gP~v~~l~s~~~~~~~~~~~~~v~vVgff~~~~~~~~~~F~~~A~~lr~~~~F~~t~~~-----~v~~~~~v~~---p 74 (250)
T 3ec3_A 3 LGSPPSKEILTLKQVQEFLKDGDDVVILGVFQGVGDPGYLQYQDAANTLREDYKFHHTFST-----EIAKFLKVSL---G 74 (250)
T ss_dssp --CCSSEECCCHHHHHHHHHHCSSCEEEEECSCTTCHHHHHHHHHHHHHTTTCCEEEECCH-----HHHHHHTCCS---S
T ss_pred CCCCCceecCCHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHHHHHHhhhcCcEEEEECcH-----HHHHHcCCCC---C
Confidence 46799999965 777777666 544577777654433378999999999999999987433 5677888864 9
Q ss_pred eEEEEecC------CCeeecCC--CCCCHHHHHHHHHHHH
Q 031686 116 VIAVASIR------KRKKYVLN--GELTLSNVKSFALDFL 147 (155)
Q Consensus 116 ~v~i~~~~------~~~kY~~~--~~~t~~~I~~Fi~~f~ 147 (155)
+|++..+. ......++ ++++.+.|.+||+.-.
T Consensus 75 ~ivlfk~~~~~~kfde~~~~y~g~~~~~~~~l~~fi~~~~ 114 (250)
T 3ec3_A 75 KLVLMQPEKFQSKYEPRMHVMDVQGSTEASAIKDYVVKHA 114 (250)
T ss_dssp EEEEECCGGGCCTTSCSCEEEECCTTSCHHHHHHHHHHHS
T ss_pred eEEEEecchhhccccccceeccCCCCCCHHHHHHHHHHcC
Confidence 99988752 11122334 4689999999998753
No 79
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=98.06 E-value=3.6e-05 Score=50.45 Aligned_cols=94 Identities=7% Similarity=0.028 Sum_probs=68.0
Q ss_pred cCCCchhhhhcCCCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCcceEEEEec
Q 031686 46 YSRETTPLILNSPLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTSRVIAVASI 122 (155)
Q Consensus 46 ~~~~~~~~i~~~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~P~v~i~~~ 122 (155)
-+.+++......+++.++.|...- .-.. ...+.++++++.+ +.|+.+|.+. ...+.+.+|+.. +|++++++
T Consensus 12 ~~~~~f~~~~~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~-~~~~~vd~~~--~~~l~~~~~v~~--~Pt~~~~~- 85 (109)
T 3f3q_A 12 KTASEFDSAIAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ-ADFYKLDVDE--LGDVAQKNEVSA--MPTLLLFK- 85 (109)
T ss_dssp CSHHHHHHHTTSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTT--CHHHHHHTTCCS--SSEEEEEE-
T ss_pred CCHHHHHHHHhcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC-CEEEEEECCC--CHHHHHHcCCCc--cCEEEEEE-
Confidence 345667777777777777776553 2244 6788889998865 8999999986 578889999974 89999987
Q ss_pred CCCeeecCCCCCCHHHHHHHHHHH
Q 031686 123 RKRKKYVLNGELTLSNVKSFALDF 146 (155)
Q Consensus 123 ~~~~kY~~~~~~t~~~I~~Fi~~f 146 (155)
.+.....+.|. +++.|+++|+++
T Consensus 86 ~G~~~~~~~G~-~~~~l~~~i~~~ 108 (109)
T 3f3q_A 86 NGKEVAKVVGA-NPAAIKQAIAAN 108 (109)
T ss_dssp TTEEEEEEESS-CHHHHHHHHHHH
T ss_pred CCEEEEEEeCC-CHHHHHHHHHhh
Confidence 32222333444 789999999875
No 80
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=98.03 E-value=1.5e-05 Score=55.47 Aligned_cols=102 Identities=13% Similarity=0.075 Sum_probs=66.2
Q ss_pred CeEecCCCchhhhhcCCCceEEEEeecC----ChhH-HHHHHHHHHhhcCceE--EEEEeCCCcchhhhhhhhCCCCCCc
Q 031686 42 PMITYSRETTPLILNSPLKLLWLFAAVH----DSEA-KSIFQETARAFKGKLL--FVYSQIYPKLKGQIFDYFGVTCYTS 114 (155)
Q Consensus 42 ~v~e~~~~~~~~i~~~~~~~v~lf~~~~----~~~~-~~~~~~vA~~~~~~i~--F~~vd~~~~~~~~~~~~~gl~~~~~ 114 (155)
-+.+++.+++..........++.|.... .-.. ...+.++|+++ +++. |+.+|.+. ...+.+.||+.. +
T Consensus 18 ~~~~l~~~~f~~~i~~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~~v~~~~~~Vd~d~--~~~la~~~~V~~--i 92 (142)
T 2es7_A 18 GWQPVEASTVDDWIKRVGDGVILLSSDPRRTPEVSDNPVMIAELLREF-PQFDWQVAVADLEQ--SEAIGDRFNVRR--F 92 (142)
T ss_dssp TCEECCCC--------CCSEEEEECCCSCC----CCHHHHHHHHHHTC-TTSCCEEEEECHHH--HHHHHHTTTCCS--S
T ss_pred cCcccccccHHHHHHhCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-cccceeEEEEECCC--CHHHHHhcCCCc--C
Confidence 4678888999888776655555554221 1123 56788999999 8888 99999885 678889999974 8
Q ss_pred ceEEEEecCCCe-eecCCCCCCHHHHHHHHHHHHcCC
Q 031686 115 RVIAVASIRKRK-KYVLNGELTLSNVKSFALDFLGDK 150 (155)
Q Consensus 115 P~v~i~~~~~~~-kY~~~~~~t~~~I~~Fi~~f~~Gk 150 (155)
|+++++. .|+ ...+.|..+.+.|.+|++..++..
T Consensus 93 PT~~~fk--~G~~v~~~~G~~~~~~l~~~i~~~l~~~ 127 (142)
T 2es7_A 93 PATLVFT--DGKLRGALSGIHPWAELLTLMRSIVDTP 127 (142)
T ss_dssp SEEEEES--CC----CEESCCCHHHHHHHHHHHHC--
T ss_pred CeEEEEe--CCEEEEEEeCCCCHHHHHHHHHHHhccc
Confidence 9999984 343 334456778999999999988653
No 81
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=98.02 E-value=9.3e-05 Score=48.26 Aligned_cols=99 Identities=14% Similarity=0.190 Sum_probs=69.9
Q ss_pred eEecCC-CchhhhhcC---CCceEEEEeecC--ChhH-HHHHHHHHHhhc-CceEEEEEeCCCcchhhhhhhhCCCCCCc
Q 031686 43 MITYSR-ETTPLILNS---PLKLLWLFAAVH--DSEA-KSIFQETARAFK-GKLLFVYSQIYPKLKGQIFDYFGVTCYTS 114 (155)
Q Consensus 43 v~e~~~-~~~~~i~~~---~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~-~~i~F~~vd~~~~~~~~~~~~~gl~~~~~ 114 (155)
|.+++. +++...... +++.++.|.... .-.. ...+.+++++++ .++.|+.+|.+. ...+.+.+|+.. +
T Consensus 2 v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~--~~~~~~~~~v~~--~ 77 (112)
T 3d6i_A 2 VIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADE--NSEISELFEISA--V 77 (112)
T ss_dssp EEEECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTT--CHHHHHHTTCCS--S
T ss_pred ccccCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEeccc--CHHHHHHcCCCc--c
Confidence 566776 778877765 556666676553 2344 677888998853 459999999986 567888999864 8
Q ss_pred ceEEEEecCCCe-eecCCCCCCHHHHHHHHHHHHc
Q 031686 115 RVIAVASIRKRK-KYVLNGELTLSNVKSFALDFLG 148 (155)
Q Consensus 115 P~v~i~~~~~~~-kY~~~~~~t~~~I~~Fi~~f~~ 148 (155)
|+++++. .|+ ...+.|. +.+.|.+++++++.
T Consensus 78 Pt~~~~~--~G~~~~~~~G~-~~~~l~~~l~~~~~ 109 (112)
T 3d6i_A 78 PYFIIIH--KGTILKELSGA-DPKEYVSLLEDCKN 109 (112)
T ss_dssp SEEEEEE--TTEEEEEECSC-CHHHHHHHHHHHHH
T ss_pred cEEEEEE--CCEEEEEecCC-CHHHHHHHHHHHHh
Confidence 9998885 343 2334444 55679999998764
No 82
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=98.00 E-value=9.2e-05 Score=56.09 Aligned_cols=106 Identities=11% Similarity=0.065 Sum_probs=76.8
Q ss_pred CCeEecCCCchhhhhcCCCceEEEEeecCChh-HHHHHHHHHHhhc--CceEEEEEeCCC---cchhhhhhhhCCCCCCc
Q 031686 41 PPMITYSRETTPLILNSPLKLLWLFAAVHDSE-AKSIFQETARAFK--GKLLFVYSQIYP---KLKGQIFDYFGVTCYTS 114 (155)
Q Consensus 41 P~v~e~~~~~~~~i~~~~~~~v~lf~~~~~~~-~~~~~~~vA~~~~--~~i~F~~vd~~~---~~~~~~~~~~gl~~~~~ 114 (155)
..|.+++.+++..+.....+.++.|+...++= ....|.++|+.++ +++.|+.+|.+. ..+..+.+.||+.++.+
T Consensus 5 ~~v~~Lt~~nF~~~i~~~~~vlV~FyA~~pWCgl~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~V~~~~~ 84 (240)
T 2qc7_A 5 KGALPLDTVTFYKVIPKSKFVLVKFDTQYPYGEKQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKLDKESY 84 (240)
T ss_dssp TTCEECCTTHHHHHGGGCSEEEEEECCSSCCSHHHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTTCCGGGC
T ss_pred CCceECCHHHHHHHHcCCCCEEEEEeCCCCCCcchHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcCCCCCCC
Confidence 45788999999988877766677776511111 2457888999886 469999999542 12578899999974359
Q ss_pred ceEEEEecCC-CeeecCCCCCCHHHHHHHHHHH
Q 031686 115 RVIAVASIRK-RKKYVLNGELTLSNVKSFALDF 146 (155)
Q Consensus 115 P~v~i~~~~~-~~kY~~~~~~t~~~I~~Fi~~f 146 (155)
|++.++.... .....+.|..+.++|.+||+..
T Consensus 85 PTl~~f~~G~~~~~~~y~G~~~~~~L~~fi~~~ 117 (240)
T 2qc7_A 85 PVFYLFRDGDFENPVPYTGAVKVGAIQRWLKGQ 117 (240)
T ss_dssp SEEEEEETTCSSCCEECCSCSCHHHHHHHHHHT
T ss_pred CEEEEEeCCCcCcceeecCCCCHHHHHHHHHHh
Confidence 9999987422 1134556788999999999987
No 83
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=97.96 E-value=0.0002 Score=46.27 Aligned_cols=97 Identities=7% Similarity=-0.008 Sum_probs=68.0
Q ss_pred eEec-CCCchhhhh--cCCCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCcce
Q 031686 43 MITY-SRETTPLIL--NSPLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTSRV 116 (155)
Q Consensus 43 v~e~-~~~~~~~i~--~~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~P~ 116 (155)
+.++ +.+++.... ..+++.++.|.... .-.. ...+.++|+++ +++.|+.+|.+. ...+.+.||+.. +|+
T Consensus 3 v~~i~~~~~~~~~~~~~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~-~~~~~~~vd~~~--~~~~~~~~~v~~--~Pt 77 (107)
T 1gh2_A 3 VKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKY-PQAVFLEVDVHQ--CQGTAATNNISA--TPT 77 (107)
T ss_dssp EEEECSGGGHHHHHHHTTTSCEEEEEECSSCHHHHHHHHHHHHHHHHC-TTSEEEEEETTT--SHHHHHHTTCCS--SSE
T ss_pred eEEecCHHHHHHHHHhCCCCEEEEEEECCCChhhHHHHHHHHHHHHHC-CCcEEEEEECcc--CHHHHHhcCCCc--ccE
Confidence 4455 457787777 45666676776553 2244 67788899998 569999999986 567888999874 899
Q ss_pred EEEEecCCCe-eecCCCCCCHHHHHHHHHHHH
Q 031686 117 IAVASIRKRK-KYVLNGELTLSNVKSFALDFL 147 (155)
Q Consensus 117 v~i~~~~~~~-kY~~~~~~t~~~I~~Fi~~f~ 147 (155)
++++.. |+ ...+.| .+.++|.+|+++.+
T Consensus 78 ~~~~~~--G~~~~~~~G-~~~~~l~~~l~~~l 106 (107)
T 1gh2_A 78 FQFFRN--KVRIDQYQG-ADAVGLEEKIKQHL 106 (107)
T ss_dssp EEEEET--TEEEEEEES-SCHHHHHHHHHHHH
T ss_pred EEEEEC--CeEEEEEeC-CCHHHHHHHHHHhc
Confidence 988852 43 223344 45566999998875
No 84
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=97.94 E-value=8.7e-05 Score=57.65 Aligned_cols=108 Identities=16% Similarity=0.170 Sum_probs=80.5
Q ss_pred CCCCeEecCCCchhhhhc-CCCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCc
Q 031686 39 KIPPMITYSRETTPLILN-SPLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTS 114 (155)
Q Consensus 39 ~~P~v~e~~~~~~~~i~~-~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~ 114 (155)
.-+.|.++|.+++..... .+.++++.|...- .-.. ...+.++|+++.+.+.++.++.+......+++.||+.. +
T Consensus 15 ~~~~vv~lt~~~f~~~i~~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~d~~~~~~l~~~~~I~~--~ 92 (298)
T 3ed3_A 15 SDPHISELTPKSFDKAIHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKNKALCAKYDVNG--F 92 (298)
T ss_dssp SCTTCEECCHHHHHHHHTSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTSTTTHHHHHHTTCCB--S
T ss_pred CCCCeEEeCHHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCCcEEEEEEccCccCHHHHHhCCCCc--c
Confidence 346689999999998874 4556677776553 2244 67889999999988889999887433678889999974 8
Q ss_pred ceEEEEecCC----------------CeeecCCCCCCHHHHHHHHHHHHc
Q 031686 115 RVIAVASIRK----------------RKKYVLNGELTLSNVKSFALDFLG 148 (155)
Q Consensus 115 P~v~i~~~~~----------------~~kY~~~~~~t~~~I~~Fi~~f~~ 148 (155)
|++.++.... .....+.|..+.+.|.+|+.+...
T Consensus 93 Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~~ 142 (298)
T 3ed3_A 93 PTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRIR 142 (298)
T ss_dssp SEEEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTCC
T ss_pred ceEEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhcc
Confidence 9999988532 013455778899999999987653
No 85
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=97.94 E-value=3.2e-05 Score=54.02 Aligned_cols=101 Identities=14% Similarity=0.069 Sum_probs=75.6
Q ss_pred eEecCCCchhhhhcCCCceEEEEeecC----ChhH-HHHHHHHHHhhcCc-eEEEEEeCCCcchhhhhhhhCCCCCCcce
Q 031686 43 MITYSRETTPLILNSPLKLLWLFAAVH----DSEA-KSIFQETARAFKGK-LLFVYSQIYPKLKGQIFDYFGVTCYTSRV 116 (155)
Q Consensus 43 v~e~~~~~~~~i~~~~~~~v~lf~~~~----~~~~-~~~~~~vA~~~~~~-i~F~~vd~~~~~~~~~~~~~gl~~~~~P~ 116 (155)
+.++|.++++....++.++++.|.-.- .-.. .-.+.++|++|.++ +.|+.+|.|+ +..+...||+.. +|+
T Consensus 19 ~~~~t~~~F~~~v~~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvDe--~~~lA~~ygV~s--IPT 94 (140)
T 2qgv_A 19 WTPVSESRLDDWLTQAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQ--SEAIGDRFGAFR--FPA 94 (140)
T ss_dssp CEECCHHHHHHHHHTCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHH--HHHHHHHHTCCS--SSE
T ss_pred CccCCHHHHHHHHhCCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCC--CHHHHHHcCCcc--CCE
Confidence 447788888877766667766554221 1123 56888999999999 9999999996 788999999974 899
Q ss_pred EEEEecCCCe-eecCCCCCCHHHHHHHHHHHHcC
Q 031686 117 IAVASIRKRK-KYVLNGELTLSNVKSFALDFLGD 149 (155)
Q Consensus 117 v~i~~~~~~~-kY~~~~~~t~~~I~~Fi~~f~~G 149 (155)
++++.. |+ .-...|-.+.+.|.++|+.+++.
T Consensus 95 lilFk~--G~~v~~~~G~~~k~~l~~~i~~~l~~ 126 (140)
T 2qgv_A 95 TLVFTG--GNYRGVLNGIHPWAELINLMRGLVEP 126 (140)
T ss_dssp EEEEET--TEEEEEEESCCCHHHHHHHHHHHHC-
T ss_pred EEEEEC--CEEEEEEecCCCHHHHHHHHHHHhcC
Confidence 999974 43 22344667889999999998854
No 86
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=97.94 E-value=6.4e-05 Score=49.28 Aligned_cols=99 Identities=4% Similarity=0.052 Sum_probs=68.6
Q ss_pred EecCCCchhhhhcCCCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCcceEEEE
Q 031686 44 ITYSRETTPLILNSPLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTSRVIAVA 120 (155)
Q Consensus 44 ~e~~~~~~~~i~~~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~P~v~i~ 120 (155)
..++.+++ .....+.+.++.|.... .-.. ...+.++++++. ++.|+.+|.+. ...+.+.+|+.. +|+++++
T Consensus 6 ~~~~~~~f-~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~-~v~~~~vd~~~--~~~l~~~~~v~~--~Pt~~~~ 79 (110)
T 2l6c_A 6 DITTEAGM-AHFEGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP-QVAISSVDSEA--RPELMKELGFER--VPTLVFI 79 (110)
T ss_dssp BCGGGCSH-HHHTTCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT-TSCEEEEEGGG--CHHHHHHTTCCS--SCEEEEE
T ss_pred ecCCHHHH-HHHHcCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC-CcEEEEEcCcC--CHHHHHHcCCcc--cCEEEEE
Confidence 45667788 44555656666776553 2344 677888888875 68899999875 567888999874 8999988
Q ss_pred ecCCCeeecCCCCCCHHHHHHHHHHHHcC
Q 031686 121 SIRKRKKYVLNGELTLSNVKSFALDFLGD 149 (155)
Q Consensus 121 ~~~~~~kY~~~~~~t~~~I~~Fi~~f~~G 149 (155)
. ++.....+.|..+++.|.++++.+..+
T Consensus 80 ~-~G~~v~~~~G~~~~~~l~~~~~~~~~~ 107 (110)
T 2l6c_A 80 R-DGKVAKVFSGIMNPRELQALYASIHHH 107 (110)
T ss_dssp E-SSSEEEEEESCCCHHHHHHHHHTC---
T ss_pred E-CCEEEEEEcCCCCHHHHHHHHHHHhhh
Confidence 4 222233445778999999999988654
No 87
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=97.93 E-value=0.00011 Score=51.10 Aligned_cols=105 Identities=10% Similarity=0.081 Sum_probs=73.7
Q ss_pred CCCeEecC-CCchhhhhcC--CCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCC
Q 031686 40 IPPMITYS-RETTPLILNS--PLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYT 113 (155)
Q Consensus 40 ~P~v~e~~-~~~~~~i~~~--~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~ 113 (155)
...+.+++ .+++..+... +.+.++.|.... .-.. ...+.++++++ +++.|+.+|.+. ...+.+.||+..
T Consensus 11 ~~~v~~l~~~~~~~~~~~~~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~-~~v~~~~vd~~~--~~~l~~~~~v~~-- 85 (153)
T 2wz9_A 11 VAAVEEVGSAGQFEELLRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKEL-PQVSFVKLEAEG--VPEVSEKYEISS-- 85 (153)
T ss_dssp -CCSEEECSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTT--SHHHHHHTTCCS--
T ss_pred cCCeEEcCCHHHHHHHHHhcCCCeEEEEEECCCCHhHHHHHHHHHHHHHHc-CCeEEEEEECCC--CHHHHHHcCCCC--
Confidence 34466665 4677777766 666677776553 2244 66788888887 469999999986 567889999874
Q ss_pred cceEEEEecCCCeeecCCCCCCHHHHHHHHHHHHcCCC
Q 031686 114 SRVIAVASIRKRKKYVLNGELTLSNVKSFALDFLGDKL 151 (155)
Q Consensus 114 ~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~~Gkl 151 (155)
+|++++++ ++.....+.| .+.+.|.+||++++...-
T Consensus 86 ~Pt~~~~~-~G~~~~~~~G-~~~~~l~~~i~~~l~~~~ 121 (153)
T 2wz9_A 86 VPTFLFFK-NSQKIDRLDG-AHAPELTKKVQRHASSGS 121 (153)
T ss_dssp SSEEEEEE-TTEEEEEEES-SCHHHHHHHHHHHSCTTS
T ss_pred CCEEEEEE-CCEEEEEEeC-CCHHHHHHHHHHHhcccc
Confidence 89999998 3222223344 578899999999987643
No 88
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=97.92 E-value=0.00014 Score=59.99 Aligned_cols=104 Identities=9% Similarity=0.046 Sum_probs=82.2
Q ss_pred CCeEecCCCchhhhhcCCCceEEEEeecC--ChhH-HHHHHHHHHhhcCc-eEEEEEeCCCcchhhhhhhhCCCCCCcce
Q 031686 41 PPMITYSRETTPLILNSPLKLLWLFAAVH--DSEA-KSIFQETARAFKGK-LLFVYSQIYPKLKGQIFDYFGVTCYTSRV 116 (155)
Q Consensus 41 P~v~e~~~~~~~~i~~~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~-i~F~~vd~~~~~~~~~~~~~gl~~~~~P~ 116 (155)
..|.++|.+++......+.+.++.|...- .-.. ...+.++|+++++. +.|+.+|.+. ...+.+.||+.+ +|+
T Consensus 14 ~~v~~l~~~~f~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~--~Pt 89 (504)
T 2b5e_A 14 SAVVKLATDSFNEYIQSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTE--NQDLCMEHNIPG--FPS 89 (504)
T ss_dssp SSCEECCTTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTT--CHHHHHHTTCCS--SSE
T ss_pred CCcEECCHHHHHHHHhcCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCC--CHHHHHhcCCCc--CCE
Confidence 35888999999998887766677777653 2244 67899999999985 9999999986 578889999975 899
Q ss_pred EEEEecCCCe--eecCCCCCCHHHHHHHHHHHHcC
Q 031686 117 IAVASIRKRK--KYVLNGELTLSNVKSFALDFLGD 149 (155)
Q Consensus 117 v~i~~~~~~~--kY~~~~~~t~~~I~~Fi~~f~~G 149 (155)
+.++... .. ...+.|..+.+.|.+|+.+....
T Consensus 90 ~~~~~~g-~~~~~~~~~G~~~~~~l~~~l~~~~~~ 123 (504)
T 2b5e_A 90 LKIFKNS-DVNNSIDYEGPRTAEAIVQFMIKQSQP 123 (504)
T ss_dssp EEEEETT-CTTCEEECCSCCSHHHHHHHHHHHTSC
T ss_pred EEEEeCC-ccccceeecCCCCHHHHHHHHHHhcCC
Confidence 9998742 22 45567888999999999987754
No 89
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=97.92 E-value=5e-05 Score=49.42 Aligned_cols=98 Identities=13% Similarity=0.134 Sum_probs=68.3
Q ss_pred eEec-CCCchhhhhcC----CCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCc
Q 031686 43 MITY-SRETTPLILNS----PLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTS 114 (155)
Q Consensus 43 v~e~-~~~~~~~i~~~----~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~ 114 (155)
+.++ +.+++...... +.+.++.|.... .-.. ...+.++++++. ++.|+.+|.+. ...+.+.||+.. .
T Consensus 6 v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~~--~~~~~~~~~v~~--~ 80 (113)
T 1ti3_A 6 VIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP-NVTFLKVDVDE--LKAVAEEWNVEA--M 80 (113)
T ss_dssp EEEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS-SEEEEEEETTT--CHHHHHHHHCSS--T
T ss_pred eeEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC-CcEEEEEEccc--cHHHHHhCCCCc--c
Confidence 4555 44666665553 555566666553 2244 667888998886 69999999986 567888999874 8
Q ss_pred ceEEEEecCCCe-eecCCCCCCHHHHHHHHHHHHc
Q 031686 115 RVIAVASIRKRK-KYVLNGELTLSNVKSFALDFLG 148 (155)
Q Consensus 115 P~v~i~~~~~~~-kY~~~~~~t~~~I~~Fi~~f~~ 148 (155)
|+++++. .|+ .+.+.| .+.+.|.+++++++.
T Consensus 81 Pt~~~~~--~G~~~~~~~g-~~~~~l~~~l~~~~~ 112 (113)
T 1ti3_A 81 PTFIFLK--DGKLVDKTVG-ADKDGLPTLVAKHAT 112 (113)
T ss_dssp TEEEEEE--TTEEEEEEEC-CCTTHHHHHHHHHHH
T ss_pred cEEEEEe--CCEEEEEEec-CCHHHHHHHHHHhhc
Confidence 9998885 343 233345 688899999998874
No 90
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=97.92 E-value=0.00029 Score=53.62 Aligned_cols=106 Identities=12% Similarity=0.043 Sum_probs=76.4
Q ss_pred CCeEecCCCchhhhhcCCCceEEEEeecCChh-HHHHHHHHHHhhc---CceEEEEEeCCC---cchhhhhhhhCCCCCC
Q 031686 41 PPMITYSRETTPLILNSPLKLLWLFAAVHDSE-AKSIFQETARAFK---GKLLFVYSQIYP---KLKGQIFDYFGVTCYT 113 (155)
Q Consensus 41 P~v~e~~~~~~~~i~~~~~~~v~lf~~~~~~~-~~~~~~~vA~~~~---~~i~F~~vd~~~---~~~~~~~~~~gl~~~~ 113 (155)
+.|.+++.+|+..+.....++++.|+....+= ....|.++|+++. +++.|+.+|.+. ..+..+.+.||+.++.
T Consensus 16 ~~v~~Lt~~nF~~vi~~~~~vlV~Fy~~ApWCgl~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~~V~~~~ 95 (248)
T 2c0g_A 16 TGCVDLDELSFEKTVERFPYSVVKFDIASPYGEKHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRYKVDDKN 95 (248)
T ss_dssp TTCEECCTTTHHHHHTTSSEEEEEEEESSCCSHHHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHTTCCTTS
T ss_pred CCcEECCHHHHHHHHhcCCCEEEEEECCCCCCccHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHHhCCCcCC
Confidence 45788999999998877766676776211111 2457888898884 479999999764 1256788999998445
Q ss_pred cceEEEEecCC-CeeecC--CCCCCHHHHHHHHHHHH
Q 031686 114 SRVIAVASIRK-RKKYVL--NGELTLSNVKSFALDFL 147 (155)
Q Consensus 114 ~P~v~i~~~~~-~~kY~~--~~~~t~~~I~~Fi~~f~ 147 (155)
+|++.++. .. .....+ .|..+.++|.+||+...
T Consensus 96 ~PTl~~F~-G~~~~~~~y~~~G~~~~~~L~~fi~~~~ 131 (248)
T 2c0g_A 96 FPSIFLFK-GNADEYVQLPSHVDVTLDNLKAFVSANT 131 (248)
T ss_dssp CCEEEEES-SSSSSEEECCTTSCCCHHHHHHHHHHHS
T ss_pred CCeEEEEe-CCcCcceeecccCCCCHHHHHHHHHHhh
Confidence 99999987 32 112334 67889999999999874
No 91
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=97.91 E-value=9.4e-05 Score=49.69 Aligned_cols=99 Identities=14% Similarity=0.122 Sum_probs=69.0
Q ss_pred CCeEec-CCCchhhhhcC----CCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCC
Q 031686 41 PPMITY-SRETTPLILNS----PLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCY 112 (155)
Q Consensus 41 P~v~e~-~~~~~~~i~~~----~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~ 112 (155)
..|.++ +.+++...... +++.++.|.... .-.. ...+.++++++. ++.|+.+|.+. ...+.+.||+..
T Consensus 16 ~~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~vd~d~--~~~l~~~~~v~~- 91 (124)
T 1xfl_A 16 GQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP-NVLFLKVDTDE--LKSVASDWAIQA- 91 (124)
T ss_dssp SCCEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS-SEEEEEEETTT--SHHHHHHTTCCS-
T ss_pred CcEEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CcEEEEEECcc--CHHHHHHcCCCc-
Confidence 345666 44666665553 555666666543 1234 667888999886 69999999986 567889999874
Q ss_pred CcceEEEEecCCCe-eecCCCCCCHHHHHHHHHHHH
Q 031686 113 TSRVIAVASIRKRK-KYVLNGELTLSNVKSFALDFL 147 (155)
Q Consensus 113 ~~P~v~i~~~~~~~-kY~~~~~~t~~~I~~Fi~~f~ 147 (155)
+|+++++. .|+ .+.+.| .+.+.|.++|++++
T Consensus 92 -~Pt~~~~~--~G~~~~~~~G-~~~~~l~~~l~~~l 123 (124)
T 1xfl_A 92 -MPTFMFLK--EGKILDKVVG-AKKDELQSTIAKHL 123 (124)
T ss_dssp -SSEEEEEE--TTEEEEEEES-CCHHHHHHHHHHHC
T ss_pred -cCEEEEEE--CCEEEEEEeC-CCHHHHHHHHHHhc
Confidence 89998874 343 333445 58999999998875
No 92
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=97.91 E-value=0.00011 Score=48.07 Aligned_cols=101 Identities=11% Similarity=0.183 Sum_probs=70.7
Q ss_pred CCeEec-CCCchhhhhcC----CCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCC
Q 031686 41 PPMITY-SRETTPLILNS----PLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCY 112 (155)
Q Consensus 41 P~v~e~-~~~~~~~i~~~----~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~ 112 (155)
..+.++ +.+++...... +++.++.|.... .-.. ...+.++++++. ++.|+.+|.+. ...+.+.||+..
T Consensus 6 ~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~--~~~~~~~~~v~~- 81 (118)
T 2vm1_A 6 GAVIACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP-GAIFLKVDVDE--LKDVAEAYNVEA- 81 (118)
T ss_dssp CCEEECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTT--SHHHHHHTTCCS-
T ss_pred CceEEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC-CcEEEEEEccc--CHHHHHHcCCCc-
Confidence 345666 35666666654 556676676553 1244 677888999887 69999999986 567889999874
Q ss_pred CcceEEEEecCCCe-eecCCCCCCHHHHHHHHHHHHcC
Q 031686 113 TSRVIAVASIRKRK-KYVLNGELTLSNVKSFALDFLGD 149 (155)
Q Consensus 113 ~~P~v~i~~~~~~~-kY~~~~~~t~~~I~~Fi~~f~~G 149 (155)
.|+++++. .|+ ...+.| .+.+.|.++++.+++.
T Consensus 82 -~Pt~~~~~--~g~~~~~~~g-~~~~~l~~~l~~~~~~ 115 (118)
T 2vm1_A 82 -MPTFLFIK--DGEKVDSVVG-GRKDDIHTKIVALMGS 115 (118)
T ss_dssp -BSEEEEEE--TTEEEEEEES-CCHHHHHHHHHHHHC-
T ss_pred -CcEEEEEe--CCeEEEEecC-CCHHHHHHHHHHHhcc
Confidence 89998875 243 233345 5889999999998764
No 93
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=97.89 E-value=0.00012 Score=49.00 Aligned_cols=106 Identities=10% Similarity=0.034 Sum_probs=71.3
Q ss_pred eEecCCCchhhhhc----CCCceEEEEeecC-C-hhH-HHHH---HHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCC
Q 031686 43 MITYSRETTPLILN----SPLKLLWLFAAVH-D-SEA-KSIF---QETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCY 112 (155)
Q Consensus 43 v~e~~~~~~~~i~~----~~~~~v~lf~~~~-~-~~~-~~~~---~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~ 112 (155)
...++..++..... .+++.++.|.... . -.. ...+ .++++.+...+.++.+|.+......+.+.||+..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~- 86 (130)
T 2kuc_A 8 GIAFRELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRHFVNLKMDMEKGEGVELRKKYGVHA- 86 (130)
T ss_dssp CCCCBCCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHHSEEEEECSSSTTHHHHHHHTTCCS-
T ss_pred CCCcccCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcCeEEEEEecCCcchHHHHHHcCCCC-
Confidence 34456667766552 4556677776543 1 122 3344 4555555567889999887433567889999874
Q ss_pred CcceEEEEecCCCeeecCCCCCCHHHHHHHHHHHHcCC
Q 031686 113 TSRVIAVASIRKRKKYVLNGELTLSNVKSFALDFLGDK 150 (155)
Q Consensus 113 ~~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~~Gk 150 (155)
.|++++++.+....+.+.|..+.+.|.+|++..+.+.
T Consensus 87 -~Pt~~~~d~~G~~~~~~~G~~~~~~l~~~l~~~~~~~ 123 (130)
T 2kuc_A 87 -YPTLLFINSSGEVVYRLVGAEDAPELLKKVKLGVESE 123 (130)
T ss_dssp -SCEEEEECTTSCEEEEEESCCCHHHHHHHHHHHHSCC
T ss_pred -CCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHHhc
Confidence 8999999754333445567778999999999998764
No 94
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=97.09 E-value=1.9e-06 Score=55.43 Aligned_cols=99 Identities=17% Similarity=0.142 Sum_probs=68.4
Q ss_pred eEecCCCchhhh-hcCCCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCcceEE
Q 031686 43 MITYSRETTPLI-LNSPLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTSRVIA 118 (155)
Q Consensus 43 v~e~~~~~~~~i-~~~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~P~v~ 118 (155)
+.+++.+++... ...+++.++.|.... .-.. ...+.++++++.+++.|+.+|.+. ...+.+.+|+.. .|+++
T Consensus 3 v~~l~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~--~Pt~~ 78 (106)
T 2yj7_A 3 VIEVTDENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVDE--NPNTAAQYGIRS--IPTLL 78 (106)
Confidence 456777777643 345556666666543 2234 667888899888889999999885 567788888864 89998
Q ss_pred EEecCCCeeecCCCCCCHHHHHHHHHHH
Q 031686 119 VASIRKRKKYVLNGELTLSNVKSFALDF 146 (155)
Q Consensus 119 i~~~~~~~kY~~~~~~t~~~I~~Fi~~f 146 (155)
++. ++...+.+.|..+.+++.+|++..
T Consensus 79 ~~~-~g~~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 79 LFK-NGQVVDRLVGAQPKEALKERIDKH 105 (106)
Confidence 874 222233445667888899988764
No 95
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=97.85 E-value=0.00033 Score=46.46 Aligned_cols=101 Identities=7% Similarity=0.092 Sum_probs=71.4
Q ss_pred CCCeEecCCCchhhhhc--CCCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCc
Q 031686 40 IPPMITYSRETTPLILN--SPLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTS 114 (155)
Q Consensus 40 ~P~v~e~~~~~~~~i~~--~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~ 114 (155)
...+.+++.+++..... .+++.++.|.... .-.. ...+.++++++.+ +.|+.+|.+.. ...+.+.+|+.. .
T Consensus 17 ~~~v~~l~~~~~~~~~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~-~~~~~vd~~~~-~~~~~~~~~v~~--~ 92 (124)
T 1faa_A 17 VGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLD-VIFLKLDCNQE-NKTLAKELGIRV--V 92 (124)
T ss_dssp TTSEEEECTTTHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEECSST-THHHHHHHCCSS--S
T ss_pred CCceEEecchhHHHHHHhcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCCC-CEEEEEecCcc-hHHHHHHcCCCe--e
Confidence 45688899999887766 4556676776543 2244 6678889998874 89999998732 567888999974 8
Q ss_pred ceEEEEecCCCe-eecCCCCCCHHHHHHHHHHHH
Q 031686 115 RVIAVASIRKRK-KYVLNGELTLSNVKSFALDFL 147 (155)
Q Consensus 115 P~v~i~~~~~~~-kY~~~~~~t~~~I~~Fi~~f~ 147 (155)
|++++.. .|+ ...+.|. ..+.|.++++.++
T Consensus 93 Pt~~~~~--~G~~~~~~~G~-~~~~l~~~i~~~~ 123 (124)
T 1faa_A 93 PTFKILK--ENSVVGEVTGA-KYDKLLEAIQAAR 123 (124)
T ss_dssp SEEEEEE--TTEEEEEEESS-CHHHHHHHHHHHT
T ss_pred eEEEEEe--CCcEEEEEcCC-CHHHHHHHHHHhh
Confidence 9987765 243 2233443 4889999998875
No 96
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=97.79 E-value=8.5e-05 Score=49.18 Aligned_cols=95 Identities=13% Similarity=0.097 Sum_probs=67.0
Q ss_pred eEecCC-CchhhhhcCCCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCcceEE
Q 031686 43 MITYSR-ETTPLILNSPLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTSRVIA 118 (155)
Q Consensus 43 v~e~~~-~~~~~i~~~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~P~v~ 118 (155)
+.+++. +.+..+.+.+++.++.|.... .-.. ...+.++++++.+ +.|+.+|.+. ...+.+.+|+.. +|+++
T Consensus 14 ~~~~~~~~~~~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~-v~~~~vd~~~--~~~l~~~~~v~~--~Pt~~ 88 (114)
T 2oe3_A 14 ITKLTNLTEFRNLIKQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD-VRFVKCDVDE--SPDIAKECEVTA--MPTFV 88 (114)
T ss_dssp SCBCCSHHHHHHHHHHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT-SEEEEEETTT--CHHHHHHTTCCS--BSEEE
T ss_pred eeecCCHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCC--CHHHHHHCCCCc--ccEEE
Confidence 445543 556677777767777776543 2244 6678899999877 9999999986 567889999874 89998
Q ss_pred EEecCCCe-eecCCCCCCHHHHHHHHHH
Q 031686 119 VASIRKRK-KYVLNGELTLSNVKSFALD 145 (155)
Q Consensus 119 i~~~~~~~-kY~~~~~~t~~~I~~Fi~~ 145 (155)
+.. .|+ ...+.|.. .+.|.+++++
T Consensus 89 ~~~--~G~~~~~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 89 LGK--DGQLIGKIIGAN-PTALEKGIKD 113 (114)
T ss_dssp EEE--TTEEEEEEESSC-HHHHHHHHHT
T ss_pred EEe--CCeEEEEEeCCC-HHHHHHHHHh
Confidence 874 243 23344545 8899999874
No 97
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=97.76 E-value=0.00028 Score=47.81 Aligned_cols=101 Identities=12% Similarity=0.101 Sum_probs=71.1
Q ss_pred eEec-CCCchhhhhc----CCCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCc
Q 031686 43 MITY-SRETTPLILN----SPLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTS 114 (155)
Q Consensus 43 v~e~-~~~~~~~i~~----~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~ 114 (155)
+.++ +.+++..... .+++.++.|.... .-.. ...+.++++++. ++.|+.+|.+. ...+.+.||+.. +
T Consensus 26 ~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~v~~~~--~~~~~~~~~v~~--~ 100 (139)
T 3d22_A 26 VHLITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYP-SLMFLVIDVDE--LSDFSASWEIKA--T 100 (139)
T ss_dssp CEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTT--SHHHHHHTTCCE--E
T ss_pred EEEeCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CCEEEEEeCcc--cHHHHHHcCCCc--c
Confidence 4445 4567766553 3556666676543 2234 667888998884 69999999986 578889999974 8
Q ss_pred ceEEEEecCCCe-eecCCCCCCHHHHHHHHHHHHcCCC
Q 031686 115 RVIAVASIRKRK-KYVLNGELTLSNVKSFALDFLGDKL 151 (155)
Q Consensus 115 P~v~i~~~~~~~-kY~~~~~~t~~~I~~Fi~~f~~Gkl 151 (155)
|+++++. .|+ .+.+.|. +.+.|.++++.++.+..
T Consensus 101 Pt~~~~~--~G~~~~~~~G~-~~~~l~~~l~~~~~~~~ 135 (139)
T 3d22_A 101 PTFFFLR--DGQQVDKLVGA-NKPELHKKITAILDSLP 135 (139)
T ss_dssp SEEEEEE--TTEEEEEEESC-CHHHHHHHHHHHHHTSC
T ss_pred cEEEEEc--CCeEEEEEeCC-CHHHHHHHHHHHhccCC
Confidence 9998874 243 3334455 88999999999988753
No 98
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=97.71 E-value=0.00039 Score=42.73 Aligned_cols=77 Identities=16% Similarity=0.151 Sum_probs=57.3
Q ss_pred eEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCcceEEEEecCCCeeecCCCCCCHH
Q 031686 61 LLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTSRVIAVASIRKRKKYVLNGELTLS 137 (155)
Q Consensus 61 ~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~P~v~i~~~~~~~kY~~~~~~t~~ 137 (155)
.++.|.... .-.. ...+.++++++.+++.|+.+|.+. ...+.+.+|+.. .|++++ + |+. .+.|..+.+
T Consensus 5 ~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~--~~~~~~~~~v~~--~Pt~~~-~---G~~-~~~G~~~~~ 75 (85)
T 1fo5_A 5 KIELFTSPMCPHCPAAKRVVEEVANEMPDAVEVEYINVME--NPQKAMEYGIMA--VPTIVI-N---GDV-EFIGAPTKE 75 (85)
T ss_dssp EEEEEECCCSSCCCTHHHHHHHHHHHCSSSEEEEEEESSS--SCCTTTSTTTCC--SSEEEE-T---TEE-ECCSSSSSH
T ss_pred EEEEEeCCCCCchHHHHHHHHHHHHHcCCceEEEEEECCC--CHHHHHHCCCcc--cCEEEE-C---CEE-eeecCCCHH
Confidence 355665543 2234 678889999998889999999986 457788888864 899988 3 443 455667899
Q ss_pred HHHHHHHHH
Q 031686 138 NVKSFALDF 146 (155)
Q Consensus 138 ~I~~Fi~~f 146 (155)
.|.+++++.
T Consensus 76 ~l~~~l~~~ 84 (85)
T 1fo5_A 76 ALVEAIKKR 84 (85)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999999875
No 99
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=97.70 E-value=0.0003 Score=47.34 Aligned_cols=90 Identities=12% Similarity=0.171 Sum_probs=62.9
Q ss_pred cCCCceEEEEeecC--ChhH-HHHHH--HHHHhhcCceEEEEEeC---CCcchhhhhhhhCCCC-CCcceEEEEecCCCe
Q 031686 56 NSPLKLLWLFAAVH--DSEA-KSIFQ--ETARAFKGKLLFVYSQI---YPKLKGQIFDYFGVTC-YTSRVIAVASIRKRK 126 (155)
Q Consensus 56 ~~~~~~v~lf~~~~--~~~~-~~~~~--~vA~~~~~~i~F~~vd~---~~~~~~~~~~~~gl~~-~~~P~v~i~~~~~~~ 126 (155)
..++++++.|...- .-.. ...|. ++++++++++.|+.+|. +. ...+.+.||+.. ..+|++++++.++..
T Consensus 27 ~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~~~vd~~~~~~--~~~l~~~~~v~~~~~~Pt~~~~d~~G~~ 104 (133)
T 3fk8_A 27 RTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKHFEVVKIDVGNFDR--NLELSQAYGDPIQDGIPAVVVVNSDGKV 104 (133)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHHCEEEEEECTTTTS--SHHHHHHTTCGGGGCSSEEEEECTTSCE
T ss_pred hcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCCEEEEEEeCCcccc--hHHHHHHhCCccCCccceEEEECCCCCE
Confidence 34566666666442 1233 55677 88888877899999998 54 678889999921 248999999765433
Q ss_pred eecCCC-------CCCHHHHHHHHHHHH
Q 031686 127 KYVLNG-------ELTLSNVKSFALDFL 147 (155)
Q Consensus 127 kY~~~~-------~~t~~~I~~Fi~~f~ 147 (155)
.+...+ ..+.++|.+|++.+.
T Consensus 105 ~~~~~g~~~~~~~~~~~~~l~~~l~~l~ 132 (133)
T 3fk8_A 105 RYTTKGGELANARKMSDQGIYDFFAKIT 132 (133)
T ss_dssp EEECCSCTTTTGGGSCHHHHHHHHHHHH
T ss_pred EEEecCCcccccccCCHHHHHHHHHHhc
Confidence 444444 478999999999875
No 100
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=97.67 E-value=0.0011 Score=44.71 Aligned_cols=102 Identities=13% Similarity=0.043 Sum_probs=67.9
Q ss_pred cCCCchhhhhcCCCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCC-------------------------
Q 031686 46 YSRETTPLILNSPLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYP------------------------- 97 (155)
Q Consensus 46 ~~~~~~~~i~~~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~------------------------- 97 (155)
++.+++..---.+++.++.|.... .-.. ...+.++++++.+++.|+.++.+.
T Consensus 17 ~~g~~~~~~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (148)
T 2b5x_A 17 LNGEVTREQLIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHDITQPIFV 96 (148)
T ss_dssp ESCCCCHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEECCCSTTTSSHHHHHHHHHHTTCCSCEEE
T ss_pred ccCcccchhhcCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCCcEEEEEEcCCCccccCHHHHHHHHHHcCCCcceEE
Confidence 344443332224556676776543 1234 677888888988778888887542
Q ss_pred cchhhhhhhhCCCCCCcceEEEEecCCCeeecCCCCCCHHHHHHHHHHHHcC
Q 031686 98 KLKGQIFDYFGVTCYTSRVIAVASIRKRKKYVLNGELTLSNVKSFALDFLGD 149 (155)
Q Consensus 98 ~~~~~~~~~~gl~~~~~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~~G 149 (155)
.....+.+.||+.. .|++++++.+....+...|..+.+.+.++|+..+++
T Consensus 97 d~~~~~~~~~~v~~--~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~~ 146 (148)
T 2b5x_A 97 DSDHALTDAFENEY--VPAYYVFDKTGQLRHFQAGGSGMKMLEKRVNRVLAE 146 (148)
T ss_dssp CSSCHHHHHTCCCC--SSEEEEECTTCBEEEEEESCSTTHHHHHHHHHHHTT
T ss_pred CCchhHHHHhCCCC--CCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHhc
Confidence 11346778888864 899999986533344455667899999999998875
No 101
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=97.66 E-value=0.00029 Score=46.47 Aligned_cols=101 Identities=8% Similarity=0.050 Sum_probs=68.6
Q ss_pred CCeEecCCCchhhhhcCCCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCC--cchhhhhhhhCCCCCCcc
Q 031686 41 PPMITYSRETTPLILNSPLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYP--KLKGQIFDYFGVTCYTSR 115 (155)
Q Consensus 41 P~v~e~~~~~~~~i~~~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~--~~~~~~~~~~gl~~~~~P 115 (155)
..+..++.+++......+.+.++.|...- .-.. ...+.++++++..++.++-++... .....+.+.+|+.. .|
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~--~P 89 (118)
T 1zma_A 12 KDLEVTTVVRAQEALDKKETATFFIGRKTCPYCRKFAGTLSGVVAETKAHIYFINSEEPSQLNDLQAFRSRYGIPT--VP 89 (118)
T ss_dssp TTSEECCHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCCCCEEEETTCGGGHHHHHHHHHHHTCCS--SC
T ss_pred hhhhcCCHHHHHHHHhCCCeEEEEEECCCCccHHHHHHHHHHHHHhcCCeEEEEECCCcCcHHHHHHHHHHcCCCC--CC
Confidence 44667788888887777777777776553 2234 667888898887677666544332 11346678899974 89
Q ss_pred eEEEEecCCCeeecCCCCCCHHHHHHHHH
Q 031686 116 VIAVASIRKRKKYVLNGELTLSNVKSFAL 144 (155)
Q Consensus 116 ~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~ 144 (155)
+++++.. +.....+.|..+.+.|.+|++
T Consensus 90 t~~~~~~-G~~~~~~~G~~~~~~l~~~l~ 117 (118)
T 1zma_A 90 GFVHITD-GQINVRCDSSMSAQEIKDFAG 117 (118)
T ss_dssp EEEEEET-TEEEEECCTTCCHHHHHHHHT
T ss_pred eEEEEEC-CEEEEEecCCCCHHHHHHHhh
Confidence 9998862 222334567889999999985
No 102
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=97.66 E-value=0.00017 Score=49.02 Aligned_cols=99 Identities=12% Similarity=0.057 Sum_probs=70.4
Q ss_pred eEecCCCchhhhhcCCCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeC---------CCcchhhhhhhhCCC
Q 031686 43 MITYSRETTPLILNSPLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQI---------YPKLKGQIFDYFGVT 110 (155)
Q Consensus 43 v~e~~~~~~~~i~~~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~---------~~~~~~~~~~~~gl~ 110 (155)
+.+++.+++...... +.++.|...- .-.. ...+.++++++. +.|+.+|. +. ...+.+.||+.
T Consensus 18 v~~l~~~~~~~~~~~--~vlv~F~a~wC~~C~~~~p~l~~l~~~~~--v~~~~vd~~~~~~~~~~d~--~~~l~~~~~v~ 91 (135)
T 3emx_A 18 LIYITPEEFRQLLQG--DAILAVYSKTCPHCHRDWPQLIQASKEVD--VPIVMFIWGSLIGERELSA--ARLEMNKAGVE 91 (135)
T ss_dssp EEECCHHHHHHHHTS--SEEEEEEETTCHHHHHHHHHHHHHHTTCC--SCEEEEEECTTCCHHHHHH--HHHHHHHHTCC
T ss_pred eeecCHHHHHHHhCC--cEEEEEECCcCHhhhHhChhHHHHHHHCC--CEEEEEECCCchhhhhhhh--hHHHHHHcCCc
Confidence 667777777777765 6676776553 2234 667888888886 88888888 43 66778899997
Q ss_pred CCCcceEEEEecCCCeeecCCCCCCHHHHHHHHHHHHcCC
Q 031686 111 CYTSRVIAVASIRKRKKYVLNGELTLSNVKSFALDFLGDK 150 (155)
Q Consensus 111 ~~~~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~~Gk 150 (155)
. +|++++++ .+.....+.|..+.+.+.++++...++.
T Consensus 92 ~--~Pt~~~~~-~G~~v~~~~G~~~~~~~~~~i~~~~~~~ 128 (135)
T 3emx_A 92 G--TPTLVFYK-EGRIVDKLVGATPWSLKVEKAREIYGGE 128 (135)
T ss_dssp S--SSEEEEEE-TTEEEEEEESCCCHHHHHHHHHHHC---
T ss_pred e--eCeEEEEc-CCEEEEEEeCCCCHHHHHHHHHHHhCCC
Confidence 4 89999988 3223344567789999999999988663
No 103
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=97.64 E-value=0.00086 Score=47.70 Aligned_cols=101 Identities=7% Similarity=0.010 Sum_probs=70.3
Q ss_pred eEecCC-Cchhhhh--cCCCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCcce
Q 031686 43 MITYSR-ETTPLIL--NSPLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTSRV 116 (155)
Q Consensus 43 v~e~~~-~~~~~i~--~~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~P~ 116 (155)
+.+++. +++++.. +++.++++=|...- .=.. ...|.++|+++.+++.|+.+|.++ ++.+.+.||+. ..|+
T Consensus 23 v~~l~t~~~f~~~v~~~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~v~f~kVDVDe--~~e~a~~y~V~--siPT 98 (160)
T 2av4_A 23 LQHLNSGWAVDQAIVNEDERLVCIRFGHDYDPDCMKMDELLYKVADDIKNFCVIYLVDITE--VPDFNTMYELY--DPVS 98 (160)
T ss_dssp CEECCSHHHHHHHHHHCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTT--CCTTTTTTTCC--SSEE
T ss_pred hhccCCHHHHHHHHHhcCCCEEEEEEECCCChhHHHHHHHHHHHHHHccCCcEEEEEECCC--CHHHHHHcCCC--CCCE
Confidence 556654 5665444 35556666665442 1234 668999999999999999999997 78899999997 4899
Q ss_pred EEEEecCCCeee----------cCCCCCC-HHHHHHHHHHHHcC
Q 031686 117 IAVASIRKRKKY----------VLNGELT-LSNVKSFALDFLGD 149 (155)
Q Consensus 117 v~i~~~~~~~kY----------~~~~~~t-~~~I~~Fi~~f~~G 149 (155)
+.++.. |+.- .+.|-.+ .+.|.++|+.++.|
T Consensus 99 ~~fFk~--G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~~r~ 140 (160)
T 2av4_A 99 VMFFYR--NKHMMIDLGTGNNNKINWPMNNKQEFIDIVETIFRG 140 (160)
T ss_dssp EEEEET--TEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHHHHH
T ss_pred EEEEEC--CEEEEEecCCCCcCeEEeecCCHHHHHHHHHHHHHH
Confidence 987763 3322 2334455 88888888777654
No 104
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=97.62 E-value=0.00033 Score=46.45 Aligned_cols=102 Identities=20% Similarity=0.237 Sum_probs=68.0
Q ss_pred CCeEec--CCCchh-hhhcCCCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCc
Q 031686 41 PPMITY--SRETTP-LILNSPLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTS 114 (155)
Q Consensus 41 P~v~e~--~~~~~~-~i~~~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~ 114 (155)
|.+..+ +.+++. .+.+.+.+.++.|.... .-.. ...+.++|+++ +++.|+.+|.+. ...+.+.||+.. +
T Consensus 3 ~~v~~~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~~v~~~~vd~~~--~~~~~~~~~i~~--~ 77 (118)
T 2f51_A 3 DPIVHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEAN-KDVTFIKVDVDK--NGNAADAYGVSS--I 77 (118)
T ss_dssp CCSEEECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTT--CHHHHHHTTCCS--S
T ss_pred CcceEecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-CCeEEEEEECCC--CHHHHHhcCCCC--C
Confidence 345566 345665 44455666677776553 2244 66788899988 789999999986 567889999874 8
Q ss_pred ceEEEEecC--CCe-eecCCCCCCHHHHHHHHHHHHc
Q 031686 115 RVIAVASIR--KRK-KYVLNGELTLSNVKSFALDFLG 148 (155)
Q Consensus 115 P~v~i~~~~--~~~-kY~~~~~~t~~~I~~Fi~~f~~ 148 (155)
|++++++.. .|+ ...+.| ...+.|++.+..+..
T Consensus 78 Pt~~~~~~~~~~G~~~~~~~G-~~~~~l~~~~~~~~~ 113 (118)
T 2f51_A 78 PALFFVKKEGNEIKTLDQFVG-ADVSRIKADIEKFKH 113 (118)
T ss_dssp SEEEEEEEETTEEEEEEEEES-CCHHHHHHHHHHHC-
T ss_pred CEEEEEeCCCCcceEEEeecC-CCHHHHHHHHHHhhh
Confidence 999988741 132 222333 345679999887753
No 105
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=97.61 E-value=0.002 Score=47.98 Aligned_cols=107 Identities=11% Similarity=0.087 Sum_probs=77.4
Q ss_pred CeEecCCCchhhhhcC-CCceEEEEeecC--ChhH-HHHHHHHHHhhcC---ceEEEEEeCCCcchhhhhhhhCCCCCCc
Q 031686 42 PMITYSRETTPLILNS-PLKLLWLFAAVH--DSEA-KSIFQETARAFKG---KLLFVYSQIYPKLKGQIFDYFGVTCYTS 114 (155)
Q Consensus 42 ~v~e~~~~~~~~i~~~-~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~---~i~F~~vd~~~~~~~~~~~~~gl~~~~~ 114 (155)
.|.+++.+++...... +.+.++.|...- .-.. ...+.++|+++++ .+.|+.+|.+...+..+.+.||+.. +
T Consensus 13 ~v~~l~~~~f~~~i~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~v~~--~ 90 (244)
T 3q6o_A 13 PLTLLQADTVRGAVLGSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIPG--F 90 (244)
T ss_dssp SSEEECTTTHHHHHSSCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTTCCS--S
T ss_pred CceeCChhhHHHHHhhCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcCCCc--c
Confidence 4788999998875544 455566676543 2244 6789999999887 7999999985434678899999974 8
Q ss_pred ceEEEEecCC----CeeecCCCCCCHHHHHHHHHHHHcCCC
Q 031686 115 RVIAVASIRK----RKKYVLNGELTLSNVKSFALDFLGDKL 151 (155)
Q Consensus 115 P~v~i~~~~~----~~kY~~~~~~t~~~I~~Fi~~f~~Gkl 151 (155)
|++++++... +..+.+.| .+.+.|.+|+.+++....
T Consensus 91 Pt~~~~~~g~~~~~g~~~~~~g-~~~~~l~~~i~~~l~~~~ 130 (244)
T 3q6o_A 91 PTVRFFXAFTXNGSGAVFPVAG-ADVQTLRERLIDALESHH 130 (244)
T ss_dssp SEEEEECTTCCSSSCEECCCTT-CCHHHHHHHHHHHHHTCT
T ss_pred CEEEEEeCCCcCCCCeeEecCC-CCHHHHHHHHHHHHHhcc
Confidence 9999998521 22233334 589999999999886543
No 106
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.60 E-value=5.4e-05 Score=51.55 Aligned_cols=79 Identities=11% Similarity=0.088 Sum_probs=58.8
Q ss_pred CCeEecCCCchhhhhcCCC--ceEEEEeecC--ChhH-HHHHHHHHHhhcC-ceEEEEEeCCCcchhhhhhhhCCCC---
Q 031686 41 PPMITYSRETTPLILNSPL--KLLWLFAAVH--DSEA-KSIFQETARAFKG-KLLFVYSQIYPKLKGQIFDYFGVTC--- 111 (155)
Q Consensus 41 P~v~e~~~~~~~~i~~~~~--~~v~lf~~~~--~~~~-~~~~~~vA~~~~~-~i~F~~vd~~~~~~~~~~~~~gl~~--- 111 (155)
..+.+++.+++........ +.++.|...- .-.. ...+.++|+++++ ++.|+.+|.+. ...+.+.|++..
T Consensus 7 ~~v~~l~~~~f~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~--~~~~~~~~~v~~~~~ 84 (137)
T 2dj0_A 7 GYIKYFNDKTIDEELERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGR--YTDVSTRYKVSTSPL 84 (137)
T ss_dssp SCCEECCTTHHHHHHHHSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTT--CHHHHHHTTCCCCSS
T ss_pred ceEEEccHhhHHHHHhcCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCcc--CHHHHHHccCcccCC
Confidence 3578889999887776554 4566666542 2244 6788999999986 79999999986 577889999861
Q ss_pred -CCcceEEEEe
Q 031686 112 -YTSRVIAVAS 121 (155)
Q Consensus 112 -~~~P~v~i~~ 121 (155)
..+|+++++.
T Consensus 85 ~~~~Pt~~~~~ 95 (137)
T 2dj0_A 85 TKQLPTLILFQ 95 (137)
T ss_dssp SSCSSEEEEES
T ss_pred cCCCCEEEEEE
Confidence 1489999885
No 107
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=97.58 E-value=0.00084 Score=43.98 Aligned_cols=96 Identities=11% Similarity=0.111 Sum_probs=64.4
Q ss_pred eEecC-CCchhhhhcC--CCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCcce
Q 031686 43 MITYS-RETTPLILNS--PLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTSRV 116 (155)
Q Consensus 43 v~e~~-~~~~~~i~~~--~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~P~ 116 (155)
|.+++ .+++.+.... ++++++-|...- .-.. ...+.++|+++. ++.|+.+|.+. ++.+.+.||+.. +|+
T Consensus 2 V~~i~~~~~f~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~-~~~~~~vd~d~--~~~l~~~~~V~~--~PT 76 (105)
T 3zzx_A 2 VYQVKDQEDFTKQLNEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMS-DVVFLKVDVDE--CEDIAQDNQIAC--MPT 76 (105)
T ss_dssp CEECCSHHHHHHHHHHTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCT-TEEEEEEETTT--CHHHHHHTTCCB--SSE
T ss_pred eEEeCCHHHHHHHHHhcCCCEEEEEEECCCCCCccCCCcchhhhhhccC-CeEEEEEeccc--CHHHHHHcCCCe--ecE
Confidence 34454 3556665543 334455555432 2244 667888888875 58899999986 678999999975 899
Q ss_pred EEEEecCCCe-eecCCCCCCHHHHHHHHHHH
Q 031686 117 IAVASIRKRK-KYVLNGELTLSNVKSFALDF 146 (155)
Q Consensus 117 v~i~~~~~~~-kY~~~~~~t~~~I~~Fi~~f 146 (155)
++++.. |+ ...+.| .+++.|.+||++.
T Consensus 77 ~~~~~~--G~~v~~~~G-~~~~~l~~~i~k~ 104 (105)
T 3zzx_A 77 FLFMKN--GQKLDSLSG-ANYDKLLELVEKN 104 (105)
T ss_dssp EEEEET--TEEEEEEES-CCHHHHHHHHHHH
T ss_pred EEEEEC--CEEEEEEeC-cCHHHHHHHHHhc
Confidence 998863 43 333445 4789999999864
No 108
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=97.58 E-value=0.0002 Score=47.94 Aligned_cols=98 Identities=14% Similarity=0.160 Sum_probs=66.2
Q ss_pred CeEecCCCchhhhhcC--CCceEEEEeec-------C--ChhH-HHHHHHHHHhhcCceEEEEEeC-------CCcchhh
Q 031686 42 PMITYSRETTPLILNS--PLKLLWLFAAV-------H--DSEA-KSIFQETARAFKGKLLFVYSQI-------YPKLKGQ 102 (155)
Q Consensus 42 ~v~e~~~~~~~~i~~~--~~~~v~lf~~~-------~--~~~~-~~~~~~vA~~~~~~i~F~~vd~-------~~~~~~~ 102 (155)
.+...+.+++...... +.++++.|... - .-.. ...+.++++++.+++.|+.+|. +. ...
T Consensus 6 ~v~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~~~d~--~~~ 83 (123)
T 1wou_A 6 EVSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGCVFIYCQVGEKPYWKDP--NND 83 (123)
T ss_dssp EEEEESHHHHHHHHHTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTTEEEEEEECCCHHHHHCT--TCH
T ss_pred eEEeccHHHHHHHHHHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCCCcEEEEEECCCchhhhch--hHH
Confidence 3445566667666654 55666667655 2 1234 6678889999988899999998 43 567
Q ss_pred hhhhhCCCCCCcceEEEEecCCCeeecCCCCCCHHHHHHHHHH
Q 031686 103 IFDYFGVTCYTSRVIAVASIRKRKKYVLNGELTLSNVKSFALD 145 (155)
Q Consensus 103 ~~~~~gl~~~~~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~ 145 (155)
+.+.||+.. +|++++++. +.+..-....+++.|++|+++
T Consensus 84 ~~~~~~i~~--~Pt~~~~~~--~~~~~g~~~~~~~~l~~~i~~ 122 (123)
T 1wou_A 84 FRKNLKVTA--VPTLLKYGT--PQKLVESECLQANLVEMLFSE 122 (123)
T ss_dssp HHHHHCCCS--SSEEEETTS--SCEEEGGGGGCHHHHHHHHHC
T ss_pred HHHHCCCCe--eCEEEEEcC--CceEeccccCCHHHHHHHHhc
Confidence 788899974 899998875 323221112578889998863
No 109
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=97.52 E-value=0.00061 Score=46.22 Aligned_cols=102 Identities=11% Similarity=0.144 Sum_probs=68.3
Q ss_pred CeEecCC-CchhhhhcCC--CceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCcc
Q 031686 42 PMITYSR-ETTPLILNSP--LKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTSR 115 (155)
Q Consensus 42 ~v~e~~~-~~~~~i~~~~--~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~P 115 (155)
.+.+++. +++..+.... ++.++.|...- .-.. ...+.++++++ ++.|+.+|.+. ...+.+.||+.. +|
T Consensus 21 ~v~~l~~~~~~~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~--~v~~~~vd~~~--~~~l~~~~~v~~--~P 94 (133)
T 3cxg_A 21 IYIELKNTGSLNQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY--YVTLVDIDVDI--HPKLNDQHNIKA--LP 94 (133)
T ss_dssp EEEECCCTTHHHHHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE--ECEEEEEETTT--CHHHHHHTTCCS--SS
T ss_pred cEEEecChhHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc--CEEEEEEeccc--hHHHHHhcCCCC--CC
Confidence 4667764 7777777654 34566665543 1234 56677777776 58999999886 567888999864 89
Q ss_pred eEEEEe-cCCC--eeecCCCCCCHHHHHHHHHHHHcCC
Q 031686 116 VIAVAS-IRKR--KKYVLNGELTLSNVKSFALDFLGDK 150 (155)
Q Consensus 116 ~v~i~~-~~~~--~kY~~~~~~t~~~I~~Fi~~f~~Gk 150 (155)
+++++. .++. ....+.|. +.+.|.++|+.++..+
T Consensus 95 t~~~~~~~~g~g~~~~~~~G~-~~~~l~~~l~~~l~~~ 131 (133)
T 3cxg_A 95 TFEFYFNLNNEWVLVHTVEGA-NQNDIEKAFQKYCLEK 131 (133)
T ss_dssp EEEEEEEETTEEEEEEEEESC-CHHHHHHHHHHHSEEC
T ss_pred EEEEEEecCCCeEEEEEEcCC-CHHHHHHHHHHHHHhh
Confidence 999883 2211 22333454 8999999999987543
No 110
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=97.52 E-value=0.00047 Score=42.36 Aligned_cols=77 Identities=13% Similarity=0.104 Sum_probs=56.8
Q ss_pred EEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCcceEEEEecCCCeeecCCCCCCHHH
Q 031686 62 LWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTSRVIAVASIRKRKKYVLNGELTLSN 138 (155)
Q Consensus 62 v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~P~v~i~~~~~~~kY~~~~~~t~~~ 138 (155)
++.|.... .-.. ...+.++++++.+++.|+.+|.+. ...+.+.+|+.. .|++++ + |+. .+.|..+.+.
T Consensus 5 vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~--~~~~~~~~~v~~--~Pt~~~-~---G~~-~~~G~~~~~~ 75 (85)
T 1nho_A 5 IEVFTSPTCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMV--DREKAIEYGLMA--VPAIAI-N---GVV-RFVGAPSREE 75 (85)
T ss_dssp EEEESCSSSCCSTTHHHHHHHHHHHHCSSCCEEEECTTT--CGGGGGGTCSSC--SSEEEE-T---TTE-EEECSSCCHH
T ss_pred EEEEECCCCcchHHHHHHHHHHHHHhcCCeEEEEEECCC--CHHHHHhCCcee--eCEEEE-C---CEE-EEccCCCHHH
Confidence 45565442 2234 668889999998889999999986 567888899864 899988 3 333 3345568899
Q ss_pred HHHHHHHHH
Q 031686 139 VKSFALDFL 147 (155)
Q Consensus 139 I~~Fi~~f~ 147 (155)
|.+++++.+
T Consensus 76 l~~~l~~~l 84 (85)
T 1nho_A 76 LFEAINDEM 84 (85)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHHh
Confidence 999998765
No 111
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=97.51 E-value=0.00052 Score=47.71 Aligned_cols=98 Identities=9% Similarity=0.038 Sum_probs=68.4
Q ss_pred CCCchhhhh--cCCCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCcceEEEEe
Q 031686 47 SRETTPLIL--NSPLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTSRVIAVAS 121 (155)
Q Consensus 47 ~~~~~~~i~--~~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~P~v~i~~ 121 (155)
+.+++.... +.+.++++-|...- .-.. ...+.++|+++.+++.|+.+|.+. ...+.+.||+.. +|++++..
T Consensus 10 ~~~~~~~~i~~~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~~~~~~vd~d~--~~~l~~~~~v~~--~Pt~~~~~ 85 (149)
T 3gix_A 10 SKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYLVDVDQ--TAVYTQYFDISY--IPSTVFFF 85 (149)
T ss_dssp SHHHHHHHHHHCCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTTEEEEEEETTT--CCHHHHHTTCCS--SSEEEEEE
T ss_pred CHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCc--CHHHHHHcCCCc--cCeEEEEE
Confidence 345566555 34556666665442 2234 668889999998889999999986 678889999974 89998665
Q ss_pred cCCCee---------ecCCC-CCCHHHHHHHHHHHHcC
Q 031686 122 IRKRKK---------YVLNG-ELTLSNVKSFALDFLGD 149 (155)
Q Consensus 122 ~~~~~k---------Y~~~~-~~t~~~I~~Fi~~f~~G 149 (155)
. .... ..+.| ..+.+.|.++++.+..|
T Consensus 86 ~-G~~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~~~~ 122 (149)
T 3gix_A 86 N-GQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVIYRG 122 (149)
T ss_dssp T-TEEEEEECSSSCCSCEESCCSSHHHHHHHHHHHHHH
T ss_pred C-CeEEEeecCCCCCCeEeeecCCHHHHHHHHHHHHHH
Confidence 3 2222 33345 57889999999988654
No 112
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=97.51 E-value=0.0016 Score=54.37 Aligned_cols=107 Identities=11% Similarity=0.092 Sum_probs=77.7
Q ss_pred CeEecCCCchhhhh-cCCCceEEEEeecC--ChhH-HHHHHHHHHhhcC---ceEEEEEeCCCcchhhhhhhhCCCCCCc
Q 031686 42 PMITYSRETTPLIL-NSPLKLLWLFAAVH--DSEA-KSIFQETARAFKG---KLLFVYSQIYPKLKGQIFDYFGVTCYTS 114 (155)
Q Consensus 42 ~v~e~~~~~~~~i~-~~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~---~i~F~~vd~~~~~~~~~~~~~gl~~~~~ 114 (155)
.|.+++.+++.... +++++.++.|...- .-.. ...+.++|+++++ .+.|+.+|.+......+.+.||+.. +
T Consensus 13 ~V~~Lt~~~f~~~v~~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V~~--~ 90 (519)
T 3t58_A 13 PLTLLDADSVRPTVLGSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNIAG--F 90 (519)
T ss_dssp SSEEECTTTHHHHHSSCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTCCS--B
T ss_pred CcEECChHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCCcc--c
Confidence 47889999988755 44455566676542 2244 6788999999887 7999999986434678899999974 8
Q ss_pred ceEEEEecC--CCe-eecCCCCCCHHHHHHHHHHHHcCC
Q 031686 115 RVIAVASIR--KRK-KYVLNGELTLSNVKSFALDFLGDK 150 (155)
Q Consensus 115 P~v~i~~~~--~~~-kY~~~~~~t~~~I~~Fi~~f~~Gk 150 (155)
|++++++.. .|+ .....+..+.+.|.+||.+++...
T Consensus 91 PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~~~ 129 (519)
T 3t58_A 91 PTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALESH 129 (519)
T ss_dssp SEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHTTC
T ss_pred CEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHHhhc
Confidence 999999851 121 122234579999999999988653
No 113
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=97.50 E-value=7.5e-05 Score=49.88 Aligned_cols=105 Identities=10% Similarity=0.161 Sum_probs=71.3
Q ss_pred CCeEec-CCCchhhhhcC----CCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCC
Q 031686 41 PPMITY-SRETTPLILNS----PLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCY 112 (155)
Q Consensus 41 P~v~e~-~~~~~~~i~~~----~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~ 112 (155)
+.+.++ +.+++...... +++.++.|.... .-.. ...+.+++++++ ++.|+.+|.+. ...+.+.||+..
T Consensus 14 ~~~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~~--~~~~~~~~~v~~- 89 (130)
T 1wmj_A 14 GVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP-GAVFLKVDVDE--LKEVAEKYNVEA- 89 (130)
T ss_dssp SSSBCCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT-TBCCEECCTTT--SGGGHHHHTCCS-
T ss_pred cceEEcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-CCEEEEEeccc--hHHHHHHcCCCc-
Confidence 345566 34666665553 555666666542 2234 667888998886 68999999886 567889999874
Q ss_pred CcceEEEEecCCCe-eecCCCCCCHHHHHHHHHHHHcCCCcc
Q 031686 113 TSRVIAVASIRKRK-KYVLNGELTLSNVKSFALDFLGDKLRN 153 (155)
Q Consensus 113 ~~P~v~i~~~~~~~-kY~~~~~~t~~~I~~Fi~~f~~Gkl~p 153 (155)
.|+++++. .|+ ...+.| .+.+.|.+|+++++...-.+
T Consensus 90 -~Pt~~~~~--~g~~~~~~~g-~~~~~l~~~l~~~~~~~~~~ 127 (130)
T 1wmj_A 90 -MPTFLFIK--DGAEADKVVG-ARKDDLQNTIVKHVGATAAS 127 (130)
T ss_dssp -SCCCCBCT--TTTCCBCCCT-TCTTTHHHHHHHHTSSSCSS
T ss_pred -cceEEEEe--CCeEEEEEeC-CCHHHHHHHHHHHHhccCCC
Confidence 89988763 232 233445 57889999999998765443
No 114
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=97.38 E-value=0.0045 Score=46.39 Aligned_cols=121 Identities=11% Similarity=-0.022 Sum_probs=81.3
Q ss_pred EeccCCcCHHHHHHHHHhC---CCCCeEecCCCchhhhhcCCCce-EEEEeecC--ChhH-HHHHHHHHHhhc----Cce
Q 031686 20 IFSDVSFTISVIDDFISLN---KIPPMITYSRETTPLILNSPLKL-LWLFAAVH--DSEA-KSIFQETARAFK----GKL 88 (155)
Q Consensus 20 ~~y~g~~~~~~l~~fI~~~---~~P~v~e~~~~~~~~i~~~~~~~-v~lf~~~~--~~~~-~~~~~~vA~~~~----~~i 88 (155)
..|.|..+.+++.+|+... ..+. ..+++++.+.+-+...+. ++.|.... .-.. ...+.++|.+++ +++
T Consensus 97 ~~~~G~~~~~~l~~fv~~~l~~~~~~-~~l~~~~~~~~~~~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v 175 (243)
T 2hls_A 97 VRWTGIPAGEEIRALVEVIMRLSEDE-SGLEDATKEALKSLKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVI 175 (243)
T ss_dssp EEEESCCCTTHHHHHHHHHHHHHTTC-CCCCHHHHHHHHHCCSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCE
T ss_pred eeEcCCCcHHHHHHHHHHHHhccCCC-CCCCHHHHHHHHHcCCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcE
Confidence 3466766677888887653 1111 234555555554444455 55566543 2345 778888998883 579
Q ss_pred EEEEEeCCCcchhhhhhhhCCCCCCcceEEEEecCCCeeecCCCCCCHHHHHHHHHHHHcCC
Q 031686 89 LFVYSQIYPKLKGQIFDYFGVTCYTSRVIAVASIRKRKKYVLNGELTLSNVKSFALDFLGDK 150 (155)
Q Consensus 89 ~F~~vd~~~~~~~~~~~~~gl~~~~~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~~Gk 150 (155)
.+..+|.+. +..+.+.+|+.. +|++.+ + |+. .+.|..+.+.|.+|+...+...
T Consensus 176 ~~~~vd~~~--~~~~~~~~~V~~--vPt~~i-~---G~~-~~~G~~~~~~l~~~l~~~~~~~ 228 (243)
T 2hls_A 176 LSEAVEAYE--NPDIADKYGVMS--VPSIAI-N---GYL-VFVGVPYEEDFLDYVKSAAEGR 228 (243)
T ss_dssp EEEEEETTT--CHHHHHHTTCCS--SSEEEE-T---TEE-EEESCCCHHHHHHHHHHHHTTC
T ss_pred EEEEEECcc--CHHHHHHcCCee--eCeEEE-C---CEE-EEeCCCCHHHHHHHHHHHhhcc
Confidence 999999986 567788899864 899987 3 332 2457788999999999987643
No 115
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=97.38 E-value=0.0016 Score=44.78 Aligned_cols=96 Identities=8% Similarity=-0.002 Sum_probs=66.0
Q ss_pred CCchhh-hhc-CCCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCcceEEEEec
Q 031686 48 RETTPL-ILN-SPLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTSRVIAVASI 122 (155)
Q Consensus 48 ~~~~~~-i~~-~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~P~v~i~~~ 122 (155)
.+++.. +.. ++.++++.|...- .-.. ...+.++|+++++++.|+.+|.+. ...+.+.||+.. +|+++++..
T Consensus 11 ~~~~~~~v~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~--~~~~~~~~~i~~--~Pt~~~~~~ 86 (142)
T 1qgv_A 11 GWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITE--VPDFNKMYELYD--PCTVMFFFR 86 (142)
T ss_dssp HHHHHHHHHTCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTT--CCTTTTSSCSCS--SCEEEEEET
T ss_pred HHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCeEEEEEcccc--CHHHHHHcCCCC--CCEEEEEEC
Confidence 455554 333 4556666666542 2234 667889999998889999999986 567888899874 899988863
Q ss_pred CCCeee----------cCCCCCC-HHHHHHHHHHHHcC
Q 031686 123 RKRKKY----------VLNGELT-LSNVKSFALDFLGD 149 (155)
Q Consensus 123 ~~~~kY----------~~~~~~t-~~~I~~Fi~~f~~G 149 (155)
|+.- .+.+.++ .+.+.++++.+++|
T Consensus 87 --G~~v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~~~~ 122 (142)
T 1qgv_A 87 --NKHIMIDLGTGNNNKINWAMEDKQEMVDIIETVYRG 122 (142)
T ss_dssp --TEEEEEECC------CCSCCSCHHHHHHHHHHHHHH
T ss_pred --CcEEEEecCCCCcceeeeecCcHHHHHHHHHHHHHH
Confidence 3221 2233454 88999999998876
No 116
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=97.37 E-value=0.0014 Score=44.34 Aligned_cols=105 Identities=7% Similarity=-0.004 Sum_probs=68.1
Q ss_pred CCCeEecC-CCchhhhhcC--CCceEEEEeecC-C-hhH-HHHH---HHHHHhhcCceEEEEEeCCCc--chhhhhhhhC
Q 031686 40 IPPMITYS-RETTPLILNS--PLKLLWLFAAVH-D-SEA-KSIF---QETARAFKGKLLFVYSQIYPK--LKGQIFDYFG 108 (155)
Q Consensus 40 ~P~v~e~~-~~~~~~i~~~--~~~~v~lf~~~~-~-~~~-~~~~---~~vA~~~~~~i~F~~vd~~~~--~~~~~~~~~g 108 (155)
.|.+..++ .+++...... ++++++.|...- . -.. ...+ .++++++++ +.|+.+|.+.. ....+.+.||
T Consensus 10 ~~~f~~~~~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~~-~~~~~vd~~~~~~~~~~l~~~~~ 88 (134)
T 2fwh_A 10 HLNFTQIKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALAD-TVLLQANVTANDAQDVALLKHLN 88 (134)
T ss_dssp CCCCEECCSHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTTT-SEEEEEECTTCCHHHHHHHHHTT
T ss_pred CCCcEEecCHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC-cEEEEEeCCCCcchHHHHHHHcC
Confidence 45555443 3444444432 556666676542 1 122 3344 677888775 99999998531 2567788999
Q ss_pred CCCCCcceEEEEecCCCee--ecCCCCCCHHHHHHHHHHHH
Q 031686 109 VTCYTSRVIAVASIRKRKK--YVLNGELTLSNVKSFALDFL 147 (155)
Q Consensus 109 l~~~~~P~v~i~~~~~~~k--Y~~~~~~t~~~I~~Fi~~f~ 147 (155)
+.. +|++++++.++... +.+.|..+.+.|.++++...
T Consensus 89 v~~--~Pt~~~~d~~G~~v~~~~~~G~~~~~~l~~~l~~~~ 127 (134)
T 2fwh_A 89 VLG--LPTILFFDGQGQEHPQARVTGFMDAETFSAHLRDRQ 127 (134)
T ss_dssp CCS--SSEEEEECTTSCBCGGGCBCSCCCHHHHHHHHHHC-
T ss_pred CCC--CCEEEEECCCCCEeeeeeeeeccCHHHHHHHHHhcC
Confidence 974 89999997643222 55678889999999998764
No 117
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=97.35 E-value=0.0054 Score=41.58 Aligned_cols=93 Identities=9% Similarity=-0.019 Sum_probs=64.5
Q ss_pred CCceEEEEeecC--ChhH-HHHHHHHHHhhcC-ceEEEEEeCCCcc---------------------hhhhhhhhCCCCC
Q 031686 58 PLKLLWLFAAVH--DSEA-KSIFQETARAFKG-KLLFVYSQIYPKL---------------------KGQIFDYFGVTCY 112 (155)
Q Consensus 58 ~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~-~i~F~~vd~~~~~---------------------~~~~~~~~gl~~~ 112 (155)
++++++.|.... .-.. ...+.++++++.+ .+.|+.++.+... ...+.+.||+.
T Consensus 30 gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~-- 107 (152)
T 2lja_A 30 GKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYLIN-- 107 (152)
T ss_dssp TSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTTCC--
T ss_pred CCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcCcC--
Confidence 445666666442 2244 6778888888876 4888888776421 12566778876
Q ss_pred CcceEEEEecCCCeeecCCCCCCHHHHHHHHHHHHcCCCc
Q 031686 113 TSRVIAVASIRKRKKYVLNGELTLSNVKSFALDFLGDKLR 152 (155)
Q Consensus 113 ~~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~~Gkl~ 152 (155)
..|++++++.+....+...+..+.+.|.++|+...++.=+
T Consensus 108 ~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~~~~ 147 (152)
T 2lja_A 108 GIPRFILLDRDGKIISANMTRPSDPKTAEKFNELLGLEGH 147 (152)
T ss_dssp SSCCEEEECTTSCEEESSCCCTTCHHHHHHHHHHHTCCSS
T ss_pred CCCEEEEECCCCeEEEccCCCCCHHHHHHHHHHHhccccc
Confidence 4899999996543455556778899999999999877544
No 118
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=97.33 E-value=0.0041 Score=41.01 Aligned_cols=88 Identities=15% Similarity=0.194 Sum_probs=59.2
Q ss_pred CCCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCc---------------------chhhhhhhhCCCCC
Q 031686 57 SPLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPK---------------------LKGQIFDYFGVTCY 112 (155)
Q Consensus 57 ~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~---------------------~~~~~~~~~gl~~~ 112 (155)
.+++.++.|.... .-.. ...+.++++++. ++.|+.++.+.. ....+.+.||+.
T Consensus 24 ~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~-- 100 (136)
T 1zzo_A 24 LGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP-EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVT-- 100 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTCHHHHHTTCC--
T ss_pred CCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC-CeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCCcHHHHHcCCC--
Confidence 4456666676443 1244 677888888887 788888886531 134566777875
Q ss_pred CcceEEEEecCCCeeecCCCCCCHHHHHHHHHHHHc
Q 031686 113 TSRVIAVASIRKRKKYVLNGELTLSNVKSFALDFLG 148 (155)
Q Consensus 113 ~~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~~ 148 (155)
..|++++++.++... .+.|..+.+.|.++++..++
T Consensus 101 ~~P~~~~id~~g~i~-~~~g~~~~~~l~~~l~~~l~ 135 (136)
T 1zzo_A 101 QQPAYAFVDPHGNVD-VVRGRMSQDELTRRVTALTS 135 (136)
T ss_dssp SSSEEEEECTTCCEE-EEESCCCHHHHHHHHHHHC-
T ss_pred CCceEEEECCCCCEE-EEecCCCHHHHHHHHHHHhc
Confidence 489999998653222 34567789999999988753
No 119
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=97.32 E-value=0.0065 Score=41.70 Aligned_cols=93 Identities=14% Similarity=0.109 Sum_probs=59.7
Q ss_pred CCCceEEEEeecC--ChhH-HHHHHHHHHhhcCc-eEEEEEeCCCcc--hhhhhhhh-----------------------
Q 031686 57 SPLKLLWLFAAVH--DSEA-KSIFQETARAFKGK-LLFVYSQIYPKL--KGQIFDYF----------------------- 107 (155)
Q Consensus 57 ~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~-i~F~~vd~~~~~--~~~~~~~~----------------------- 107 (155)
.++++++.|.... .-.. ...+.+++++++++ +.|+.++.+... ..+.++.+
T Consensus 33 ~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (165)
T 3or5_A 33 KGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKNYMKTQGIIYPVMMATPELIRAFNGYIDG 112 (165)
T ss_dssp TTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHHHHHHHHHTCCSCEEECCHHHHHHHHTTSTT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCCceEecCHHHHHHHhhhhcc
Confidence 3455666666442 1234 66788888898875 888888876421 22222222
Q ss_pred CCCCCCcceEEEEecCCCeeecCCCCCCHHHHHHHHHHHHcCCC
Q 031686 108 GVTCYTSRVIAVASIRKRKKYVLNGELTLSNVKSFALDFLGDKL 151 (155)
Q Consensus 108 gl~~~~~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~~Gkl 151 (155)
|+. ..|++++++.+....+.+.|..+.+.+.++|+..+...-
T Consensus 113 ~i~--~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~~~~ 154 (165)
T 3or5_A 113 GIT--GIPTSFVIDASGNVSGVIVGPRSKADFDRIVKMALGAKA 154 (165)
T ss_dssp CSC--SSSEEEEECTTSBEEEEECSCCCHHHHHHHHHHHHC---
T ss_pred CCC--CCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHhhhc
Confidence 443 489999998754334555677899999999999987543
No 120
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=97.32 E-value=0.0074 Score=41.09 Aligned_cols=96 Identities=9% Similarity=-0.030 Sum_probs=63.6
Q ss_pred CCCceEEEEeecC--ChhH-HHHHHHHHHhhcC-ceEEEEEeCCCc----------------------chhhhhhhhCCC
Q 031686 57 SPLKLLWLFAAVH--DSEA-KSIFQETARAFKG-KLLFVYSQIYPK----------------------LKGQIFDYFGVT 110 (155)
Q Consensus 57 ~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~-~i~F~~vd~~~~----------------------~~~~~~~~~gl~ 110 (155)
.++++++.|.... .-.. ...+.++++++++ .+.++.++.+.. ....+.+.||..
T Consensus 23 ~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (151)
T 3raz_A 23 KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYGNT 102 (151)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTTCC
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhCCc
Confidence 3445566666442 1234 6678888888854 588888776521 123455667732
Q ss_pred CCCcceEEEEecCCCeeecCCCCCCHHHHHHHHHHHHcCCCc
Q 031686 111 CYTSRVIAVASIRKRKKYVLNGELTLSNVKSFALDFLGDKLR 152 (155)
Q Consensus 111 ~~~~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~~Gkl~ 152 (155)
-..+|++.+++.+....+.+.|..+.+.|.++|+...+++-+
T Consensus 103 v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l~~~~~~ 144 (151)
T 3raz_A 103 VGVLPFTVVEAPKCGYRQTITGEVNEKSLTDAVKLAHSKCRE 144 (151)
T ss_dssp SCCSSEEEEEETTTTEEEECCSCCCHHHHHHHHHHHHTC---
T ss_pred cCCCCEEEEECCCCcEEEEECCCCCHHHHHHHHHHHHHHhhc
Confidence 345899999997644466677888999999999999988644
No 121
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=97.29 E-value=0.0058 Score=40.40 Aligned_cols=87 Identities=11% Similarity=0.092 Sum_probs=59.0
Q ss_pred CCCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCc--------------------chhhhhhhhCCCCCC
Q 031686 57 SPLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPK--------------------LKGQIFDYFGVTCYT 113 (155)
Q Consensus 57 ~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~--------------------~~~~~~~~~gl~~~~ 113 (155)
.+++.++.|.... .-.. ...+.++++++. ++.|+.++.+.. ....+.+.||+..
T Consensus 23 ~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~-- 99 (136)
T 1lu4_A 23 QGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP-AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYNVPW-- 99 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTTCCS--
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHCC-CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHhcCCCC--
Confidence 4456676776443 1234 667888888887 788888877641 1245667788764
Q ss_pred cceEEEEecCCCeeecCC---CCCCHHHHHHHHHHHH
Q 031686 114 SRVIAVASIRKRKKYVLN---GELTLSNVKSFALDFL 147 (155)
Q Consensus 114 ~P~v~i~~~~~~~kY~~~---~~~t~~~I~~Fi~~f~ 147 (155)
.|++.+++.++... .+. |..+.+.|.+++++++
T Consensus 100 ~P~~~lid~~G~i~-~~~~~~g~~~~~~l~~~l~~ll 135 (136)
T 1lu4_A 100 QPAFVFYRADGTST-FVNNPTAAMSQDELSGRVAALT 135 (136)
T ss_dssp SSEEEEECTTSCEE-EECCSSSCCCHHHHHHHHHHC-
T ss_pred CCEEEEECCCCcEE-EEEcCCCccCHHHHHHHHHHHh
Confidence 89999998653323 344 6789999999998765
No 122
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=97.21 E-value=0.0036 Score=42.60 Aligned_cols=93 Identities=12% Similarity=0.102 Sum_probs=61.7
Q ss_pred CCCceEEEEeecC-C-hhH-HHHHHHHHHhhcC-ceEEEEEeCCCcc--------------------hhhhhhhhCCCCC
Q 031686 57 SPLKLLWLFAAVH-D-SEA-KSIFQETARAFKG-KLLFVYSQIYPKL--------------------KGQIFDYFGVTCY 112 (155)
Q Consensus 57 ~~~~~v~lf~~~~-~-~~~-~~~~~~vA~~~~~-~i~F~~vd~~~~~--------------------~~~~~~~~gl~~~ 112 (155)
.++++++.|.... . -.. ...+.++++++.+ .+.|+.++.+... ...+.+.||+..
T Consensus 25 ~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~- 103 (151)
T 2f9s_A 25 KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSP- 103 (151)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTCCS-
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCCCC-
Confidence 3455666666442 1 234 6678888888876 4777777665311 235667788864
Q ss_pred CcceEEEEecCCCeeecCCCCCCHHHHHHHHHHHHcCCC
Q 031686 113 TSRVIAVASIRKRKKYVLNGELTLSNVKSFALDFLGDKL 151 (155)
Q Consensus 113 ~~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~~Gkl 151 (155)
.|++++++.+....+.+.|..+.+.|.++|+..+++.-
T Consensus 104 -~P~~~lid~~G~i~~~~~G~~~~~~l~~~l~~ll~~~~ 141 (151)
T 2f9s_A 104 -LPTTFLINPEGKVVKVVTGTMTESMIHDYMNLIKPGET 141 (151)
T ss_dssp -SCEEEEECTTSEEEEEEESCCCHHHHHHHHHHHSCC--
T ss_pred -CCeEEEECCCCcEEEEEeCCCCHHHHHHHHHHHHhhhh
Confidence 89999998653334445577899999999999988764
No 123
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=97.16 E-value=0.0029 Score=42.30 Aligned_cols=86 Identities=13% Similarity=0.119 Sum_probs=58.8
Q ss_pred CCCceEEEEeecC--ChhH-HHHHHHHHHhhc-CceEEEEEeCCC-----------------------cchhhhhhhhCC
Q 031686 57 SPLKLLWLFAAVH--DSEA-KSIFQETARAFK-GKLLFVYSQIYP-----------------------KLKGQIFDYFGV 109 (155)
Q Consensus 57 ~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~-~~i~F~~vd~~~-----------------------~~~~~~~~~~gl 109 (155)
.++++++.|.... .-.. ...+.+++++++ .++.|+.++.+. .....+.+.||+
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 112 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKEYHI 112 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchhHHHhcCc
Confidence 4556666676443 1244 678888999987 568888887753 113466788888
Q ss_pred CCCCcceEEEEecCCCeeecCCCCCCHHHHHHHHH
Q 031686 110 TCYTSRVIAVASIRKRKKYVLNGELTLSNVKSFAL 144 (155)
Q Consensus 110 ~~~~~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~ 144 (155)
.. .|++++++.+....+.+.|..+.+.|.++|+
T Consensus 113 ~~--~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~ 145 (145)
T 3erw_A 113 IT--IPTSFLLNEKGEIEKTKIGPMTAEQLKEWTE 145 (145)
T ss_dssp CE--ESEEEEECTTCCEEEEEESCCCHHHHHHHHC
T ss_pred Cc--cCeEEEEcCCCcEEEEEcCCcCHHHHHHhhC
Confidence 64 8999999875333445567789999998873
No 124
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=96.18 E-value=7.5e-05 Score=50.10 Aligned_cols=98 Identities=7% Similarity=0.011 Sum_probs=64.6
Q ss_pred hhhhhcCCCceEEEEeecC--ChhH-HHHH---HHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCcceEEEEecCC
Q 031686 51 TPLILNSPLKLLWLFAAVH--DSEA-KSIF---QETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTSRVIAVASIRK 124 (155)
Q Consensus 51 ~~~i~~~~~~~v~lf~~~~--~~~~-~~~~---~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~P~v~i~~~~~ 124 (155)
+......++++++.|...- .-.. ...+ .++++.+.+++.|+.+|.+......+.+.||+.. +|++++++...
T Consensus 12 ~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~--~Pt~~~~d~~~ 89 (130)
T 2lst_A 12 LALAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEARFVVASVSVDTPEGQELARRYRVPG--TPTFVFLVPKA 89 (130)
Confidence 3333344555565665442 1122 3445 6777777777889988885433567788899864 89999997543
Q ss_pred Cee---ecCCCCCCHHHHHHHHHHHHcCC
Q 031686 125 RKK---YVLNGELTLSNVKSFALDFLGDK 150 (155)
Q Consensus 125 ~~k---Y~~~~~~t~~~I~~Fi~~f~~Gk 150 (155)
|+. ..+.|..+.+.|.++++.++++.
T Consensus 90 G~~~~~~~~~G~~~~~~l~~~l~~~~~~~ 118 (130)
T 2lst_A 90 GAWEEVGRLFGSRPRAEFLKELRQVCVKG 118 (130)
Confidence 432 34556778899999999987654
No 125
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=97.10 E-value=0.0041 Score=41.68 Aligned_cols=98 Identities=12% Similarity=0.030 Sum_probs=66.3
Q ss_pred CCCeEecCCCchhhhhcC-CC--ceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCC
Q 031686 40 IPPMITYSRETTPLILNS-PL--KLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYT 113 (155)
Q Consensus 40 ~P~v~e~~~~~~~~i~~~-~~--~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~ 113 (155)
+..+.++|.+++...... +. ++++-|.... .-.. ...+.++|++|. ++.|+.+|.+. . .+.|++. .
T Consensus 2 ~G~v~~it~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~-~v~f~kvd~d~--~---~~~~~v~--~ 73 (118)
T 3evi_A 2 FGELREISGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFP-ETKFVKAIVNS--C---IQHYHDN--C 73 (118)
T ss_dssp CCSCEECCGGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCT-TSEEEEEEGGG--T---STTCCGG--G
T ss_pred CcceEEeCHHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCC-CCEEEEEEhHH--h---HHHCCCC--C
Confidence 456788888888775543 32 4566665543 2344 678899999986 59999999985 2 4667775 4
Q ss_pred cceEEEEecCCC-eee-cCC---C-CCCHHHHHHHHHH
Q 031686 114 SRVIAVASIRKR-KKY-VLN---G-ELTLSNVKSFALD 145 (155)
Q Consensus 114 ~P~v~i~~~~~~-~kY-~~~---~-~~t~~~I~~Fi~~ 145 (155)
+|++.++..... .++ -.. + +++.++|+.++..
T Consensus 74 ~PT~~~fk~G~~v~~~~G~~~~gg~~~~~~~le~~L~~ 111 (118)
T 3evi_A 74 LPTIFVYKNGQIEAKFIGIIECGGINLKLEELEWKLAE 111 (118)
T ss_dssp CSEEEEEETTEEEEEEESTTTTTCSSCCHHHHHHHHHT
T ss_pred CCEEEEEECCEEEEEEeChhhhCCCCCCHHHHHHHHHH
Confidence 899999884210 122 121 2 6899999999975
No 126
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=97.05 E-value=0.0032 Score=47.25 Aligned_cols=90 Identities=11% Similarity=0.082 Sum_probs=61.2
Q ss_pred hhhhhcC-CCce-EEEEeec--C-ChhH-HHHHHHHHHh---hcCc--eEEEEEeCCCcchhhhhhhhCCCCCCcceEEE
Q 031686 51 TPLILNS-PLKL-LWLFAAV--H-DSEA-KSIFQETARA---FKGK--LLFVYSQIYPKLKGQIFDYFGVTCYTSRVIAV 119 (155)
Q Consensus 51 ~~~i~~~-~~~~-v~lf~~~--~-~~~~-~~~~~~vA~~---~~~~--i~F~~vd~~~~~~~~~~~~~gl~~~~~P~v~i 119 (155)
+..+++. +.|+ +.+|.+. . .... ...+.++|+. ++++ +.|+.+|.+. ++++.+.||++ ..|++.+
T Consensus 17 l~~~~~~~~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~--~~~~~~~~gv~--~~Pt~~i 92 (243)
T 2hls_A 17 LRETLAEMVNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRES--DSDKFSEFKVE--RVPTVAF 92 (243)
T ss_dssp HHHHHTTCCSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTT--THHHHHHTTCC--SSSEEEE
T ss_pred HHHHHHhCCCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCc--CHHHHHhcCCC--cCCEEEE
Confidence 4445543 2455 4444443 2 2455 7788899988 5555 9999999886 67889999998 5899998
Q ss_pred EecCCCeeecCCCCCCHHHHHHHHHHHHc
Q 031686 120 ASIRKRKKYVLNGELTLSNVKSFALDFLG 148 (155)
Q Consensus 120 ~~~~~~~kY~~~~~~t~~~I~~Fi~~f~~ 148 (155)
.+. ..+|. |.-+.+.+..|+..+++
T Consensus 93 ~~g--~~~~~--G~~~~~~l~~fv~~~l~ 117 (243)
T 2hls_A 93 LGG--EVRWT--GIPAGEEIRALVEVIMR 117 (243)
T ss_dssp TTT--TEEEE--SCCCTTHHHHHHHHHHH
T ss_pred ECC--ceeEc--CCCcHHHHHHHHHHHHh
Confidence 742 44562 22355788899888775
No 127
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=97.04 E-value=0.011 Score=40.10 Aligned_cols=94 Identities=11% Similarity=-0.035 Sum_probs=61.9
Q ss_pred CCCceEEEEeecC--ChhH-HHHHHHHHHhhcCc-eEEEEEeCCC---------------------cchhhhhhhhCCCC
Q 031686 57 SPLKLLWLFAAVH--DSEA-KSIFQETARAFKGK-LLFVYSQIYP---------------------KLKGQIFDYFGVTC 111 (155)
Q Consensus 57 ~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~-i~F~~vd~~~---------------------~~~~~~~~~~gl~~ 111 (155)
.+++.++.|.... .-.. ...+.++++++.++ +.++.++.+. .....+.+.||+..
T Consensus 27 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~ 106 (153)
T 2l5o_A 27 QGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQAFGTQV 106 (153)
T ss_dssp TTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCHHHHHHTCCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHHHHHHcCCCc
Confidence 3455666666442 2234 66788888888754 7776655220 01345677888864
Q ss_pred CCcceEEEEecCCCeeecCCCCCCHHHHHHHHHHHHcCCCc
Q 031686 112 YTSRVIAVASIRKRKKYVLNGELTLSNVKSFALDFLGDKLR 152 (155)
Q Consensus 112 ~~~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~~Gkl~ 152 (155)
.|++++++.+....+.+.|..+.+.|.++|+..+.+.-.
T Consensus 107 --~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~~~~~ 145 (153)
T 2l5o_A 107 --YPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTAWRNSDA 145 (153)
T ss_dssp --SSEEEEECSSSCCCEEEESSCCHHHHHHHHHHHHHCCSS
T ss_pred --cCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHHhhhh
Confidence 899999986533334445678899999999999887644
No 128
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=97.00 E-value=0.0026 Score=47.01 Aligned_cols=95 Identities=11% Similarity=0.097 Sum_probs=64.7
Q ss_pred Eec-CCCchhhhhcCCCceEEEEeecCChhHHHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCcceEEEEec
Q 031686 44 ITY-SRETTPLILNSPLKLLWLFAAVHDSEAKSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTSRVIAVASI 122 (155)
Q Consensus 44 ~e~-~~~~~~~i~~~~~~~v~lf~~~~~~~~~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~P~v~i~~~ 122 (155)
.++ |.++++.+.+.....++.|+...+.+..+.|.++|+.++ ++.|+.+.. ..+++.+|++ .|+|++...
T Consensus 12 ~~l~s~~~~~~~l~~~~v~vVgff~~~~~~~~~~f~~~A~~l~-~~~F~~t~~-----~~v~~~~~v~---~p~i~lfk~ 82 (227)
T 4f9z_D 12 TWLTDVPAAMEFIAATEVAVIGFFQDLEIPAVPILHSMVQKFP-GVSFGISTD-----SEVLTHYNIT---GNTICLFRL 82 (227)
T ss_dssp EECCSHHHHHHHHHTSSEEEEEECSCSCSTHHHHHHHHTTTCT-TSEEEEECC-----HHHHHHTTCC---SSEEEEEET
T ss_pred eeeCCHHHHHHHHhcCCeEEEEEecCCCchhHHHHHHHHHhCC-CceEEEECC-----HHHHHHcCCC---CCeEEEEEe
Confidence 344 446777766665444777776543222778999999995 788988643 3577888886 399998885
Q ss_pred CCCeeecCC----CCCCHHHHHHHHHHHH
Q 031686 123 RKRKKYVLN----GELTLSNVKSFALDFL 147 (155)
Q Consensus 123 ~~~~kY~~~----~~~t~~~I~~Fi~~f~ 147 (155)
.....-.++ +.++.+.|.+||+.-.
T Consensus 83 ~~~~~~~~~~~~~g~~~~~~l~~fi~~~~ 111 (227)
T 4f9z_D 83 VDNEQLNLEDEDIESIDATKLSRFIEINS 111 (227)
T ss_dssp TTTEEEEECHHHHHTCCHHHHHHHHHHHC
T ss_pred cCcccccccccccCCCCHHHHHHHHHHhC
Confidence 332222334 3689999999998753
No 129
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=96.97 E-value=0.0037 Score=45.60 Aligned_cols=96 Identities=13% Similarity=0.109 Sum_probs=62.7
Q ss_pred chhhhh-c-CCCce-EEEEeec-C-C-hhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCcceEEEEec
Q 031686 50 TTPLIL-N-SPLKL-LWLFAAV-H-D-SEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTSRVIAVASI 122 (155)
Q Consensus 50 ~~~~i~-~-~~~~~-v~lf~~~-~-~-~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~P~v~i~~~ 122 (155)
.+..++ . ...++ ++.|... . . -.. ...+.++|+. .+++.|+.+|.+.+++.++.+.||+. ..|+++++..
T Consensus 11 ~~~~~~~~~~~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~-~~~v~~~~vd~~~~~~~~~~~~~~v~--~~Pt~~~~~~ 87 (226)
T 1a8l_A 11 VIKEEFFSKMVNPVKLIVFVRKDHCQYCDQLKQLVQELSEL-TDKLSYEIVDFDTPEGKELAKRYRID--RAPATTITQD 87 (226)
T ss_dssp HHHHHTGGGCCSCEEEEEEECSSSCTTHHHHHHHHHHHHTT-CTTEEEEEEETTSHHHHHHHHHTTCC--SSSEEEEEET
T ss_pred HHHHHHHHhcCCCeEEEEEecCCCCchhHHHHHHHHHHHhh-CCceEEEEEeCCCcccHHHHHHcCCC--cCceEEEEcC
Confidence 344555 2 23455 4566554 3 2 345 6778888865 67899999998853357889999997 4899999864
Q ss_pred CCCeeecCCCCCCHHHHHHHHHHHHc
Q 031686 123 RKRKKYVLNGELTLSNVKSFALDFLG 148 (155)
Q Consensus 123 ~~~~kY~~~~~~t~~~I~~Fi~~f~~ 148 (155)
.......+.|..+.+.+.+|+..++.
T Consensus 88 g~~~~~~~~G~~~~~~l~~~l~~~l~ 113 (226)
T 1a8l_A 88 GKDFGVRYFGLPAGHEFAAFLEDIVD 113 (226)
T ss_dssp TBCCSEEEESCCCTTHHHHHHHHHHH
T ss_pred CceeeEEEeccCcHHHHHHHHHHHHh
Confidence 21111223345567788999888764
No 130
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=96.92 E-value=0.019 Score=38.36 Aligned_cols=88 Identities=10% Similarity=0.020 Sum_probs=58.8
Q ss_pred CCCceEEEEeecC--ChhH-HHHHHHHHHhh-cCc-eEEEEEeCCCcc-----------------------hhhhhhhhC
Q 031686 57 SPLKLLWLFAAVH--DSEA-KSIFQETARAF-KGK-LLFVYSQIYPKL-----------------------KGQIFDYFG 108 (155)
Q Consensus 57 ~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~-~~~-i~F~~vd~~~~~-----------------------~~~~~~~~g 108 (155)
.++++++.|.... .-.. ...+.++++++ .++ +.++.++.+... ...+.+.||
T Consensus 32 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 111 (148)
T 3fkf_A 32 RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQYA 111 (148)
T ss_dssp TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTT
T ss_pred CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhcC
Confidence 3455666666442 2344 67888899998 664 888888766422 236678888
Q ss_pred CCCCCcceEEEEecCCCeeecCCCCCCHHHHHHHHHHHHcC
Q 031686 109 VTCYTSRVIAVASIRKRKKYVLNGELTLSNVKSFALDFLGD 149 (155)
Q Consensus 109 l~~~~~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~~G 149 (155)
+. .+|++++++.+....+.. .+.+.+.++++.+++.
T Consensus 112 v~--~~P~~~lid~~G~i~~~~---~~~~~l~~~l~~ll~~ 147 (148)
T 3fkf_A 112 IL--TLPTNILLSPTGKILARD---IQGEALTGKLKELLKT 147 (148)
T ss_dssp CC--SSSEEEEECTTSBEEEES---CCHHHHHHHHHHHC--
T ss_pred CC--CcCEEEEECCCCeEEEec---CCHHHHHHHHHHHHcc
Confidence 86 489999998753333432 2889999999988754
No 131
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=96.87 E-value=0.008 Score=40.68 Aligned_cols=99 Identities=13% Similarity=0.040 Sum_probs=65.5
Q ss_pred CCCCeEecCCCchhhhhcCC---CceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCC
Q 031686 39 KIPPMITYSRETTPLILNSP---LKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCY 112 (155)
Q Consensus 39 ~~P~v~e~~~~~~~~i~~~~---~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~ 112 (155)
....+.+++.+++....... +++++.|...- .-.. ...+.++|+++. ++.|+.+|.+. . .+.|++.
T Consensus 8 ~~g~v~~i~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~-~v~~~~vd~~~--~---~~~~~i~-- 79 (135)
T 2dbc_A 8 KFGELREISGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP-ETKFVKAIVNS--C---IEHYHDN-- 79 (135)
T ss_dssp CCCSCEECCHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS-SEEEEEECCSS--S---CSSCCSS--
T ss_pred CCCceEEcCHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC-CcEEEEEEhhc--C---cccCCCC--
Confidence 45567778877777655432 34566665442 2244 667888999885 59999999885 2 2567776
Q ss_pred CcceEEEEecCCCeeecCCC-------CCCHHHHHHHHHHH
Q 031686 113 TSRVIAVASIRKRKKYVLNG-------ELTLSNVKSFALDF 146 (155)
Q Consensus 113 ~~P~v~i~~~~~~~kY~~~~-------~~t~~~I~~Fi~~f 146 (155)
.+|++++++. ......+.| +++.+.|++++...
T Consensus 80 ~~Pt~~~~~~-G~~v~~~~G~~~~~~~~~~~~~l~~~l~~~ 119 (135)
T 2dbc_A 80 CLPTIFVYKN-GQIEGKFIGIIECGGINLKLEELEWKLSEV 119 (135)
T ss_dssp CCSEEEEESS-SSCSEEEESTTTTTCTTCCHHHHHHHHHHH
T ss_pred CCCEEEEEEC-CEEEEEEEeEEeeCCCcCCHHHHHHHHHHc
Confidence 4899998873 211111111 46899999999986
No 132
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=96.86 E-value=0.0095 Score=41.19 Aligned_cols=90 Identities=11% Similarity=-0.062 Sum_probs=59.8
Q ss_pred CCCceEEEEe-ecC-C-hhH-HHHH---HHHHHhhcCceEEEEEeCCCc---------chhhhhhhhCCCCCCcceEEEE
Q 031686 57 SPLKLLWLFA-AVH-D-SEA-KSIF---QETARAFKGKLLFVYSQIYPK---------LKGQIFDYFGVTCYTSRVIAVA 120 (155)
Q Consensus 57 ~~~~~v~lf~-~~~-~-~~~-~~~~---~~vA~~~~~~i~F~~vd~~~~---------~~~~~~~~~gl~~~~~P~v~i~ 120 (155)
.++++++.|. ..- . -.. ...+ .++++....++.++.+|.+.. ....+.+.||+.. +|+++++
T Consensus 46 ~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~v~~--~Pt~~~~ 123 (154)
T 2ju5_A 46 DHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGVHLHMVEVDFPQKNHQPEEQRQKNQELKAQYKVTG--FPELVFI 123 (154)
T ss_dssp HCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEECCSSCCCCHHHHHHHHHHHHHTTCCS--SSEEEEE
T ss_pred CCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcCcEEEEEecCccccCCChhhHhhHHHHHHHcCCCC--CCEEEEE
Confidence 3556666665 332 1 122 3333 455555555789999998752 1246778899875 8999999
Q ss_pred ecCCCeeecCCCCC--CHHHHHHHHHHHHcC
Q 031686 121 SIRKRKKYVLNGEL--TLSNVKSFALDFLGD 149 (155)
Q Consensus 121 ~~~~~~kY~~~~~~--t~~~I~~Fi~~f~~G 149 (155)
+.++...+.. |.. +.+.+.++++.++..
T Consensus 124 d~~G~~~~~~-G~~~~~~~~l~~~l~~~l~~ 153 (154)
T 2ju5_A 124 DAEGKQLARM-GFEPGGGAAYVSKVKSALKL 153 (154)
T ss_dssp CTTCCEEEEE-CCCTTCHHHHHHHHHHHHTC
T ss_pred cCCCCEEEEe-cCCCCCHHHHHHHHHHHHhc
Confidence 8654445556 755 899999999998764
No 133
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=96.86 E-value=0.028 Score=38.17 Aligned_cols=91 Identities=11% Similarity=0.004 Sum_probs=61.5
Q ss_pred CCceEEEEeecC--ChhH-HHHHHHHHHhhcCc-eEEEEEeCCCcc-----------------------hhhhhhhhCCC
Q 031686 58 PLKLLWLFAAVH--DSEA-KSIFQETARAFKGK-LLFVYSQIYPKL-----------------------KGQIFDYFGVT 110 (155)
Q Consensus 58 ~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~-i~F~~vd~~~~~-----------------------~~~~~~~~gl~ 110 (155)
++++++.|.... .-.. ...+.++++++.++ +.++.++.+... ...+.+.||+.
T Consensus 29 gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~ 108 (152)
T 2lrn_A 29 GKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYCIV 108 (152)
T ss_dssp TSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTTCC
T ss_pred CCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHhCCC
Confidence 445666666442 2234 66788888888765 888888776411 24566788886
Q ss_pred CCCcceEEEEecCCCeeecCCCCCCHHHHHHHHHHHHcCCCcc
Q 031686 111 CYTSRVIAVASIRKRKKYVLNGELTLSNVKSFALDFLGDKLRN 153 (155)
Q Consensus 111 ~~~~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~~Gkl~p 153 (155)
. .|++++++.+....+.. ++.+.|.++++.++++..+.
T Consensus 109 ~--~P~~~lid~~G~i~~~~---~~~~~l~~~l~~l~~~~~~~ 146 (152)
T 2lrn_A 109 G--FPHIILVDPEGKIVAKE---LRGDDLYNTVEKFVNGAKEG 146 (152)
T ss_dssp S--SCEEEEECTTSEEEEEC---CCTTHHHHHHHHHHTSSSSC
T ss_pred c--CCeEEEECCCCeEEEee---CCHHHHHHHHHHHHhhcccc
Confidence 4 89999998653323332 46789999999998876654
No 134
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=96.86 E-value=0.011 Score=43.21 Aligned_cols=93 Identities=11% Similarity=0.039 Sum_probs=62.6
Q ss_pred hhhhh--cCCCce-EEEEeec--CC----hhH-HHHHHHHHHhh--cCceEEEEEeCCCcchhhhhhhhCCCCCCcceEE
Q 031686 51 TPLIL--NSPLKL-LWLFAAV--HD----SEA-KSIFQETARAF--KGKLLFVYSQIYPKLKGQIFDYFGVTCYTSRVIA 118 (155)
Q Consensus 51 ~~~i~--~~~~~~-v~lf~~~--~~----~~~-~~~~~~vA~~~--~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~P~v~ 118 (155)
+..++ +...|+ +++|.+. .. -.. ...+.++|+++ .+++.|+.+|.+. ...+.+.||++. .|++.
T Consensus 11 l~~~~~~~~~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~--~Ptl~ 86 (229)
T 2ywm_A 11 LKELAQKEFKEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFT--HKEETEKYGVDR--VPTIV 86 (229)
T ss_dssp HHHHHHHHCCSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTT--CHHHHHHTTCCB--SSEEE
T ss_pred HHHHHHHhccCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCcc--cHHHHHHcCCCc--CcEEE
Confidence 34445 344566 4555443 22 233 56677788777 6789999999886 678899999974 89999
Q ss_pred EEecCCCeeecCCCCCCHHHHHHHHHHHHc
Q 031686 119 VASIRKRKKYVLNGELTLSNVKSFALDFLG 148 (155)
Q Consensus 119 i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~~ 148 (155)
+... +.....+.|..+.+.+.+|+.....
T Consensus 87 ~~~~-~~~~~~~~G~~~~~~l~~~~~~~~~ 115 (229)
T 2ywm_A 87 IEGD-KDYGIRYIGLPAGLEFTTLINGIFH 115 (229)
T ss_dssp EESS-SCCCEEEESCCCTTHHHHHHHHHHH
T ss_pred EECC-CcccceecCCccHHHHHHHHHHHHh
Confidence 9863 1222334566677889999888753
No 135
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=96.78 E-value=0.022 Score=37.19 Aligned_cols=88 Identities=13% Similarity=0.038 Sum_probs=57.8
Q ss_pred CCCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCC--------------------------cchhhhhhhh
Q 031686 57 SPLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYP--------------------------KLKGQIFDYF 107 (155)
Q Consensus 57 ~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~--------------------------~~~~~~~~~~ 107 (155)
.++++++.|.... .-.. ...+.++++++.+++.++.++... .....+.+.|
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 100 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLPDTDEIAKEAGDDYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLLETY 100 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTTTEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTTCHHHHHT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCCCcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcchHHHHHc
Confidence 3455666666442 1234 667888888877788888884211 0023466778
Q ss_pred CCCCCCcceEEEEecCCCeeecCCCCCCHHHHHHHHHHH
Q 031686 108 GVTCYTSRVIAVASIRKRKKYVLNGELTLSNVKSFALDF 146 (155)
Q Consensus 108 gl~~~~~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f 146 (155)
|+.. .|++++++.++.-.+...|..+.+.+.++++.+
T Consensus 101 ~v~~--~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 137 (138)
T 4evm_A 101 GVRS--YPTQAFIDKEGKLVKTHPGFMEKDAILQTLKEL 137 (138)
T ss_dssp TCCS--SSEEEEECTTCCEEEEEESCCCHHHHHHHHHHC
T ss_pred Cccc--CCeEEEECCCCcEEEeecCCCcHHHHHHHHHhh
Confidence 8754 899999987543344555778899999998764
No 136
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=96.77 E-value=0.0088 Score=40.64 Aligned_cols=89 Identities=12% Similarity=-0.036 Sum_probs=59.7
Q ss_pred CceEEEEeecC-C-hhH-HHHHHHHHHhhcCceEEEEEeCC--C-----------------------cchhhhhhhhCCC
Q 031686 59 LKLLWLFAAVH-D-SEA-KSIFQETARAFKGKLLFVYSQIY--P-----------------------KLKGQIFDYFGVT 110 (155)
Q Consensus 59 ~~~v~lf~~~~-~-~~~-~~~~~~vA~~~~~~i~F~~vd~~--~-----------------------~~~~~~~~~~gl~ 110 (155)
+++++.|.... . -.. ...+.++++++ ++.|+.++.+ . .....+.+.||+.
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~--~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~ 108 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET--GVPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRPHEVAARFKVL 108 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH--CCCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCHHHHHTTSSBC
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc--CCeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccchHHHHHHhCCC
Confidence 45666666443 1 234 66788888888 5666666661 1 0145667788886
Q ss_pred CCCcceEEEEecCCCeeecCCCCCCHHHHHHHHHHHHcCCC
Q 031686 111 CYTSRVIAVASIRKRKKYVLNGELTLSNVKSFALDFLGDKL 151 (155)
Q Consensus 111 ~~~~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~~Gkl 151 (155)
..|++++++.+....+...|..+.+.|.++|++...+.=
T Consensus 109 --~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~~~ 147 (154)
T 3ia1_A 109 --GQPWTFVVDREGKVVALFAGRAGREALLDALLLAGADLE 147 (154)
T ss_dssp --SSCEEEEECTTSEEEEEEESBCCHHHHHHHHHHTTCCC-
T ss_pred --cccEEEEECCCCCEEEEEcCCCCHHHHHHHHHhccCccc
Confidence 489999998653334455677899999999999887653
No 137
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=96.69 E-value=0.026 Score=38.08 Aligned_cols=93 Identities=15% Similarity=0.089 Sum_probs=58.9
Q ss_pred CCceEEEEeecC-C-hhH-HHHHHHHHHhhcCc-eEEEEEeCCCcc--h------------------hhhhhhhCCCCCC
Q 031686 58 PLKLLWLFAAVH-D-SEA-KSIFQETARAFKGK-LLFVYSQIYPKL--K------------------GQIFDYFGVTCYT 113 (155)
Q Consensus 58 ~~~~v~lf~~~~-~-~~~-~~~~~~vA~~~~~~-i~F~~vd~~~~~--~------------------~~~~~~~gl~~~~ 113 (155)
++++++.|.... . -.. ...+.+++++++++ +.++.++.+... . ..+.+.||+. .
T Consensus 28 gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~--~ 105 (152)
T 3gl3_A 28 GSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYGVK--G 105 (152)
T ss_dssp TSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTTCC--S
T ss_pred CCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcCCC--C
Confidence 445566666442 2 234 66788888888875 788887766421 0 1455668886 4
Q ss_pred cceEEEEecCCCeeecCCC--CCCHHHHHHHHHHHHcCCCc
Q 031686 114 SRVIAVASIRKRKKYVLNG--ELTLSNVKSFALDFLGDKLR 152 (155)
Q Consensus 114 ~P~v~i~~~~~~~kY~~~~--~~t~~~I~~Fi~~f~~Gkl~ 152 (155)
.|++++++.+....+...+ ..+.+.|.++|++.+.+.=.
T Consensus 106 ~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i~~~~~~~~~ 146 (152)
T 3gl3_A 106 MPTSFLIDRNGKVLLQHVGFRPADKEALEQQILAALGGNEG 146 (152)
T ss_dssp SSEEEEECTTSBEEEEEESCCTTTHHHHHHHHHHHTC----
T ss_pred CCeEEEECCCCCEEEEEccCCCcCHHHHHHHHHHHHccccc
Confidence 8999999875333344333 35678999999998877543
No 138
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=96.69 E-value=0.03 Score=38.47 Aligned_cols=88 Identities=13% Similarity=0.241 Sum_probs=58.1
Q ss_pred CCCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCC------------------Ccc--h-------------
Q 031686 57 SPLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIY------------------PKL--K------------- 100 (155)
Q Consensus 57 ~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~------------------~~~--~------------- 100 (155)
.+++.++.|.... .-.. ...+.++++++. ++.|+.++.+ ... .
T Consensus 36 ~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~-~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (165)
T 3ha9_A 36 GGDVVILWFMAAWCPSCVYMADLLDRLTEKYR-EISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDPSWI 114 (165)
T ss_dssp CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT-TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTTSE
T ss_pred CCCEEEEEEECCCCcchhhhHHHHHHHHHHcC-CcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCCCee
Confidence 3455666676543 2244 678888889988 7888888776 210 1
Q ss_pred -----hhhhhhhCCCCCCcceEEEEecCCCeeecCCCCC-CHHHHHHHHHHHHcC
Q 031686 101 -----GQIFDYFGVTCYTSRVIAVASIRKRKKYVLNGEL-TLSNVKSFALDFLGD 149 (155)
Q Consensus 101 -----~~~~~~~gl~~~~~P~v~i~~~~~~~kY~~~~~~-t~~~I~~Fi~~f~~G 149 (155)
..+.+.||+. ..|++++++.+....+ .+.. +.+.|.++|+..+.|
T Consensus 115 ~~~d~~~~~~~~~v~--~~P~~~lid~~G~i~~--~g~~~~~~~l~~~l~~l~~g 165 (165)
T 3ha9_A 115 MVMDDGSLVEKFNVR--SIDYIVIMDKSSNVLY--AGTTPSLGELESVIKSVQGG 165 (165)
T ss_dssp EEECCSHHHHHTTCC--SSSEEEEEETTCCEEE--EEESCCHHHHHHHHHHC---
T ss_pred EEeChHHHHHHhCCC--CceEEEEEcCCCcEEE--eCCCCCHHHHHHHHHHHhcC
Confidence 2455667765 4899999997533344 5556 899999999998876
No 139
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=96.66 E-value=0.023 Score=38.45 Aligned_cols=96 Identities=14% Similarity=0.045 Sum_probs=58.4
Q ss_pred CCCceEEEEeecC-C-hhH-HHHHHHHHHhhcC-ceEEEEEeCCCcc---------------------hhhhhhhhCCCC
Q 031686 57 SPLKLLWLFAAVH-D-SEA-KSIFQETARAFKG-KLLFVYSQIYPKL---------------------KGQIFDYFGVTC 111 (155)
Q Consensus 57 ~~~~~v~lf~~~~-~-~~~-~~~~~~vA~~~~~-~i~F~~vd~~~~~---------------------~~~~~~~~gl~~ 111 (155)
.++++++.|.... . -.. ...+.++++++.+ .+.++.++.+... ...+.+.||+..
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 106 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYGTTG 106 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHHTCCS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHhCCCC
Confidence 3455666666443 1 234 6678888889876 5777777776420 123667788864
Q ss_pred CCcceEEEEecCCCeeecCCC--CCCHHHHHHHHHHHHcCCCccC
Q 031686 112 YTSRVIAVASIRKRKKYVLNG--ELTLSNVKSFALDFLGDKLRNQ 154 (155)
Q Consensus 112 ~~~P~v~i~~~~~~~kY~~~~--~~t~~~I~~Fi~~f~~Gkl~p~ 154 (155)
.|++++++.+..-.+.+.+ +.+.+.+.++|+.+..+.-.++
T Consensus 107 --~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l~~~~~~~~ 149 (154)
T 3kcm_A 107 --VPETFVIDRHGVILKKVVGAMEWDHPEVIAFLNNELSKAREGH 149 (154)
T ss_dssp --BCEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTC--------
T ss_pred --CCeEEEECCCCcEEEEEcCCCccccHHHHHHHHHHHHHhhhcc
Confidence 8999999875333444444 4578899999999877655443
No 140
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=96.60 E-value=0.0035 Score=41.95 Aligned_cols=94 Identities=12% Similarity=0.022 Sum_probs=63.2
Q ss_pred EecC-CCchhhhhcCCCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhh----hhhhhCCCCCCcc
Q 031686 44 ITYS-RETTPLILNSPLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQ----IFDYFGVTCYTSR 115 (155)
Q Consensus 44 ~e~~-~~~~~~i~~~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~----~~~~~gl~~~~~P 115 (155)
.+++ .+.++.+.+.+.|.++.|...- .... ...|.+.+.+ +++.|+.+|.+. ++. +.+.||+.. ..|
T Consensus 9 ~~i~s~e~f~~ii~~~~~vvi~khatwCgpc~~~~~~~e~~~~~--~~v~~~~vdVde--~r~~Sn~IA~~~~V~h-~sP 83 (112)
T 3iv4_A 9 IKLSSIDQFEQVIEENKYVFVLKHSETCPISANAYDQFNKFLYE--RDMDGYYLIVQQ--ERDLSDYIAKKTNVKH-ESP 83 (112)
T ss_dssp EECCSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHH--HTCCEEEEEGGG--GHHHHHHHHHHHTCCC-CSS
T ss_pred eecCCHHHHHHHHhcCCCEEEEEECCcCHhHHHHHHHHHHHhcc--CCceEEEEEeec--CchhhHHHHHHhCCcc-CCC
Confidence 3443 3557777777666666665542 2444 6677777774 578999999986 433 789999973 379
Q ss_pred eEEEEecCCCeeecCC-CCCCHHHHHHHH
Q 031686 116 VIAVASIRKRKKYVLN-GELTLSNVKSFA 143 (155)
Q Consensus 116 ~v~i~~~~~~~kY~~~-~~~t~~~I~~Fi 143 (155)
++.++.. +...|.-. +.++.+.|.+++
T Consensus 84 q~il~k~-G~~v~~~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 84 QAFYFVN-GEMVWNRDHGDINVSSLAQAE 111 (112)
T ss_dssp EEEEEET-TEEEEEEEGGGCSHHHHHHHT
T ss_pred eEEEEEC-CEEEEEeeccccCHHHHHHhh
Confidence 9999874 22345422 579999988765
No 141
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=96.51 E-value=0.029 Score=39.35 Aligned_cols=92 Identities=11% Similarity=0.049 Sum_probs=58.4
Q ss_pred CCceEEEEeecC--ChhH-HHHHHHHHHhhcCc-e------EEEEEeCCC-c--chhhhhhhhCC---------------
Q 031686 58 PLKLLWLFAAVH--DSEA-KSIFQETARAFKGK-L------LFVYSQIYP-K--LKGQIFDYFGV--------------- 109 (155)
Q Consensus 58 ~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~-i------~F~~vd~~~-~--~~~~~~~~~gl--------------- 109 (155)
++++++.|.... .-.. ...+.+++++++++ + .|+.++.+. . ...++++.+|+
T Consensus 59 gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 138 (183)
T 3lwa_A 59 NQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRDIAQDFVTDNGLDYPSIYDPPFMTAAS 138 (183)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHHHHHHHHHHTTCCSCEEECTTCGGGGG
T ss_pred CCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHHHHHHHHHHcCCCccEEECCcchHHHH
Confidence 445566666432 1234 66788888888754 6 888887764 1 12333333343
Q ss_pred ----CCCCcceEEEEecCCCeeecCCCCCCHHHHHHHHHHHHcC
Q 031686 110 ----TCYTSRVIAVASIRKRKKYVLNGELTLSNVKSFALDFLGD 149 (155)
Q Consensus 110 ----~~~~~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~~G 149 (155)
....+|..++++.+....+.+.+..+.+.|.++|+.+++.
T Consensus 139 ~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~~ 182 (183)
T 3lwa_A 139 LGGVPASVIPTTIVLDKQHRPAAVFLREVTSKDVLDVALPLVDE 182 (183)
T ss_dssp TTTCCTTCCSEEEEECTTSCEEEEECSCCCHHHHHHHHHHHHHC
T ss_pred hccCCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHhc
Confidence 2235899889987543455556778999999999988753
No 142
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=96.30 E-value=0.063 Score=36.40 Aligned_cols=91 Identities=9% Similarity=0.030 Sum_probs=59.1
Q ss_pred CCceEEEEeecC-C--hhH-HHHHHHHHHhhcCc-eEEEEEeCC-------C-------------------cchhh----
Q 031686 58 PLKLLWLFAAVH-D--SEA-KSIFQETARAFKGK-LLFVYSQIY-------P-------------------KLKGQ---- 102 (155)
Q Consensus 58 ~~~~v~lf~~~~-~--~~~-~~~~~~vA~~~~~~-i~F~~vd~~-------~-------------------~~~~~---- 102 (155)
++++++.|.... . ..+ ...+.+++++++++ +.|+.++.+ . .....
T Consensus 30 gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 109 (160)
T 3lor_A 30 GKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAVDMPREGQRI 109 (160)
T ss_dssp TSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCTTCSS
T ss_pred CCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEECCccccchh
Confidence 445566665442 1 232 45677788888764 777777642 0 00112
Q ss_pred --hhhhhCCCCCCcceEEEEecCCCeeecCCCCCCHHHHHHHHHHHHcCC
Q 031686 103 --IFDYFGVTCYTSRVIAVASIRKRKKYVLNGELTLSNVKSFALDFLGDK 150 (155)
Q Consensus 103 --~~~~~gl~~~~~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~~Gk 150 (155)
+.+.||+.. .|++.+++.+..-.+.+.|..+.+.|.+.|+..++.+
T Consensus 110 ~~~~~~~~v~~--~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~~ 157 (160)
T 3lor_A 110 PSTMKKYRLEG--TPSIILADRKGRIRQVQFGQVDDFVLGLLLGSLLSET 157 (160)
T ss_dssp CHHHHHTTCCS--SSEEEEECTTSBEEEEEESCCCHHHHHHHHHHHHTCC
T ss_pred hhHHHhcccCc--cceEEEECCCCcEEEEecCcCCHHHHHHHHHHHHhcc
Confidence 667788764 8999999875433555567789999999999998753
No 143
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=96.30 E-value=0.0072 Score=44.69 Aligned_cols=99 Identities=11% Similarity=0.038 Sum_probs=68.4
Q ss_pred CCCeEec-CCCchhhhhcCC---CceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCC
Q 031686 40 IPPMITY-SRETTPLILNSP---LKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCY 112 (155)
Q Consensus 40 ~P~v~e~-~~~~~~~i~~~~---~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~ 112 (155)
+..|.++ +.+++....... .++++.|+... .-.. ...+.++|++|. .+.|+.+|.+ ...+.+.|++..
T Consensus 98 ~g~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~-~v~f~~vd~~---~~~l~~~~~i~~- 172 (217)
T 2trc_P 98 YGFVYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYP-MVKFCKIRAS---NTGAGDRFSSDV- 172 (217)
T ss_dssp CCSEEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT-TSEEEEEEHH---HHTCSTTSCGGG-
T ss_pred CCeEEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCC-CeEEEEEECC---cHHHHHHCCCCC-
Confidence 4567888 677777766433 45666666553 2345 778899999985 7999999987 356777788764
Q ss_pred CcceEEEEecCCCe-eecCC-------CCCCHHHHHHHHHHH
Q 031686 113 TSRVIAVASIRKRK-KYVLN-------GELTLSNVKSFALDF 146 (155)
Q Consensus 113 ~~P~v~i~~~~~~~-kY~~~-------~~~t~~~I~~Fi~~f 146 (155)
+|+++++.. |+ ...+. .+++.+.|.+|+...
T Consensus 173 -~PTl~~~~~--G~~v~~~~G~~~~~g~~~~~~~Le~~L~~~ 211 (217)
T 2trc_P 173 -LPTLLVYKG--GELISNFISVAEQFAEDFFAADVESFLNEY 211 (217)
T ss_dssp -CSEEEEEET--TEEEEEETTGGGGSCSSCCHHHHHHHHHTT
T ss_pred -CCEEEEEEC--CEEEEEEeCCcccCcccCCHHHHHHHHHHc
Confidence 899998873 32 11121 157789999999864
No 144
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=96.26 E-value=0.051 Score=44.87 Aligned_cols=106 Identities=11% Similarity=0.099 Sum_probs=73.1
Q ss_pred CCeEecCCCchhhhhcCC--CceEEEEeecC--ChhH-HHHHHHHHHhhc---C-----ceEEEEEeCCCcchhhhhhhh
Q 031686 41 PPMITYSRETTPLILNSP--LKLLWLFAAVH--DSEA-KSIFQETARAFK---G-----KLLFVYSQIYPKLKGQIFDYF 107 (155)
Q Consensus 41 P~v~e~~~~~~~~i~~~~--~~~v~lf~~~~--~~~~-~~~~~~vA~~~~---~-----~i~F~~vd~~~~~~~~~~~~~ 107 (155)
..|.+++.+++..+.... +++++.|...- .-.. ...+.++|+++. + ++.|+.+|.+. +..+.+.|
T Consensus 23 ~~V~~Lt~~~F~~~l~~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~--~~~la~~y 100 (470)
T 3qcp_A 23 SSVVDLSGDDFSRVHRVAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCAS--EVDLCRKY 100 (470)
T ss_dssp TTEEECSCSCGGGTCTTGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTT--CHHHHHHT
T ss_pred CCcEECCHHHHHHHHHhCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCC--CHHHHHHc
Confidence 358899999999887654 45666666542 1234 668899999987 2 59999999986 57889999
Q ss_pred CCCCCCcceEEEEecCCC-eeecCCC------------CCCHHHHHHHHHHHHcCC
Q 031686 108 GVTCYTSRVIAVASIRKR-KKYVLNG------------ELTLSNVKSFALDFLGDK 150 (155)
Q Consensus 108 gl~~~~~P~v~i~~~~~~-~kY~~~~------------~~t~~~I~~Fi~~f~~Gk 150 (155)
|+.. +|++++++...+ ....+.| .++.+.+++-++.+++.+
T Consensus 101 ~V~~--~PTlilf~~gg~~~~~~y~G~r~~e~L~fI~k~l~~~eLe~~~e~Link~ 154 (470)
T 3qcp_A 101 DINF--VPRLFFFYPRDSCRSNEECGTSSLEHVAFENSHLEVDELESEVRRLVNKH 154 (470)
T ss_dssp TCCS--SCEEEEEEESSCCCTTSCCCCCCEEEEECSCTTCCHHHHHHHHHHHHHHH
T ss_pred CCCc--cCeEEEEECCCceEEEEeeCCCCHHHHHHHHHhcCHHHHHHHHHHHhhhc
Confidence 9974 899999875322 1112222 256777777777665443
No 145
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=96.24 E-value=0.011 Score=40.60 Aligned_cols=106 Identities=11% Similarity=0.008 Sum_probs=63.8
Q ss_pred CCeEecCCCchhhhhcCCCceEEEEeecC--ChhH-HHHHHHHHHhhcC-ceEEEEEeCCC-------------------
Q 031686 41 PPMITYSRETTPLILNSPLKLLWLFAAVH--DSEA-KSIFQETARAFKG-KLLFVYSQIYP------------------- 97 (155)
Q Consensus 41 P~v~e~~~~~~~~i~~~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~-~i~F~~vd~~~------------------- 97 (155)
|.+...+.+.+...-..+++.++.|.... .-.. ...+.+++++++. .+.++.+..+.
T Consensus 21 p~l~~~~g~~~~~~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~ 100 (164)
T 2h30_A 21 STMKTADNRPASVYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWYAGLNY 100 (164)
T ss_dssp TTCEETTSSBGGGGCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTTSCC
T ss_pred CccCCCCCCEeeHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHHHHhCCC
Confidence 34455555555443334556666666432 1233 5677778877642 35554444210
Q ss_pred -------cchhhhhhhhCCCCCCcceEEEEecCCCeeecCCCCCCHHHHHHHHHHHHc
Q 031686 98 -------KLKGQIFDYFGVTCYTSRVIAVASIRKRKKYVLNGELTLSNVKSFALDFLG 148 (155)
Q Consensus 98 -------~~~~~~~~~~gl~~~~~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~~ 148 (155)
.....+.+.||+. .+|++++++.+....+.+.|..+.+.|.++|+..+.
T Consensus 101 ~~~~~~~d~~~~~~~~~~v~--~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~~~~ 156 (164)
T 2h30_A 101 PKLPVVTDNGGTIAQNLNIS--VYPSWALIGKDGDVQRIVKGSINEAQALALIRNPNA 156 (164)
T ss_dssp TTSCEEECTTCHHHHHTTCC--SSSEEEEECTTSCEEEEEESCCCHHHHHHHHHCTTC
T ss_pred CcceEEEcCchHHHHHcCCC--ccceEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 0023556677775 389999998754344555677899999999998875
No 146
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=96.22 E-value=0.036 Score=38.55 Aligned_cols=99 Identities=8% Similarity=0.021 Sum_probs=59.0
Q ss_pred cCCCchhhhh----cCCCceEEEEeecC-C--hhH-HHHH--HHHHHhhcCceEEEEEeCCCcchhhh------------
Q 031686 46 YSRETTPLIL----NSPLKLLWLFAAVH-D--SEA-KSIF--QETARAFKGKLLFVYSQIYPKLKGQI------------ 103 (155)
Q Consensus 46 ~~~~~~~~i~----~~~~~~v~lf~~~~-~--~~~-~~~~--~~vA~~~~~~i~F~~vd~~~~~~~~~------------ 103 (155)
.+..++...+ ..++++++-|...- . ... ...+ .++++.+++++.|+.+|.+.. ..+
T Consensus 31 ~~~~~~~~~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~~~~~v~v~~d~~--~~~~~~~~~~~~~~~ 108 (172)
T 3f9u_A 31 AKFDDYDLGMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINNDYVLITLYVDNK--TPLTEPVKIMENGTE 108 (172)
T ss_dssp CCBSCHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEETTCC--CEEEEEEEEEETTEE
T ss_pred cchhhHHHHHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCCEEEEEEecCcc--cccchhhhhhhcchh
Confidence 3444555444 45666666665432 1 111 1111 445555555799999998752 222
Q ss_pred --------------hhhhCCCCCCcceEEEEecCCCeeecCCCCCC-HHHHHHHHHHHHc
Q 031686 104 --------------FDYFGVTCYTSRVIAVASIRKRKKYVLNGELT-LSNVKSFALDFLG 148 (155)
Q Consensus 104 --------------~~~~gl~~~~~P~v~i~~~~~~~kY~~~~~~t-~~~I~~Fi~~f~~ 148 (155)
.+.||+.. +|++++++.+....+...|..+ .+.+.++++..++
T Consensus 109 ~~~~~~~~~~~~~~~~~~~v~~--~Pt~~lid~~G~~~~~~~G~~~~~~~l~~~l~~~l~ 166 (172)
T 3f9u_A 109 RTLRTVGDKWSYLQRVKFGANA--QPFYVLIDNEGNPLNKSYAYDEDISKYINFLQTGLE 166 (172)
T ss_dssp EEEEEHHHHHHHHHHHHHSCCC--SSEEEEECTTSCBSSCCBCSCCCHHHHHHHHHHHHH
T ss_pred hhhhhhhhhhhHHHHHHcCCCC--cceEEEECCCCCEEeeccCCCCCHHHHHHHHHHHHH
Confidence 57788874 8999999875333444457667 8888888877653
No 147
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=96.17 E-value=0.074 Score=37.52 Aligned_cols=89 Identities=10% Similarity=0.065 Sum_probs=58.3
Q ss_pred eEEEEeecC-C-hhH-HHHHHHHHHhhcCc-eEEEEEeCCCc---------------------------chhhhhhhhCC
Q 031686 61 LLWLFAAVH-D-SEA-KSIFQETARAFKGK-LLFVYSQIYPK---------------------------LKGQIFDYFGV 109 (155)
Q Consensus 61 ~v~lf~~~~-~-~~~-~~~~~~vA~~~~~~-i~F~~vd~~~~---------------------------~~~~~~~~~gl 109 (155)
+++.|.... . -.. ...+.+++++++++ +.++.++.+.. ....+.+.||+
T Consensus 49 vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 128 (196)
T 2ywi_A 49 TVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDETQEVAKAYDA 128 (196)
T ss_dssp EEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSCHHHHHHTC
T ss_pred EEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCchHHHHHhCC
Confidence 566665432 1 233 66777888888764 77777776310 12355667777
Q ss_pred CCCCcceEEEEecCCCeeec---------CCCCCCHHHHHHHHHHHHcCCC
Q 031686 110 TCYTSRVIAVASIRKRKKYV---------LNGELTLSNVKSFALDFLGDKL 151 (155)
Q Consensus 110 ~~~~~P~v~i~~~~~~~kY~---------~~~~~t~~~I~~Fi~~f~~Gkl 151 (155)
. ..|++.+++.+..-.|. +.+..+.+.|.+.|+..++++-
T Consensus 129 ~--~~P~~~lid~~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~ll~~~~ 177 (196)
T 2ywi_A 129 A--CTPDFYIFDRDLKCVYRGQLDDSRPNNGIPVTGESIRAALDALLEGRP 177 (196)
T ss_dssp C--EESEEEEEETTCBEEEEECSSSCCTTTCCCCCCHHHHHHHHHHHHTCC
T ss_pred C--CCCeEEEEcCCCeEEEccccCcccccccCccCHHHHHHHHHHHHcCCC
Confidence 5 37999999875333443 3456789999999999998754
No 148
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=96.16 E-value=0.1 Score=38.51 Aligned_cols=115 Identities=10% Similarity=-0.021 Sum_probs=68.1
Q ss_pred ccCCcCHHHHHHHHHhC----C------CCCeEecCCCchhhhhcCC--CceEEEEeecCChhHHHHHHHHHHhhc--Cc
Q 031686 22 SDVSFTISVIDDFISLN----K------IPPMITYSRETTPLILNSP--LKLLWLFAAVHDSEAKSIFQETARAFK--GK 87 (155)
Q Consensus 22 y~g~~~~~~l~~fI~~~----~------~P~v~e~~~~~~~~i~~~~--~~~v~lf~~~~~~~~~~~~~~vA~~~~--~~ 87 (155)
+.| .+.+.|.+||.+. . .|.+...+.+++..++... .+++++|.+.+. ...++++..+. ..
T Consensus 110 ~~g-~~~~~l~~~i~~~l~~~~~~~p~~~p~l~~~~~~~l~~~~~~~~~~~~al~f~~~~~----~~~~~~~~d~~~~~~ 184 (244)
T 3q6o_A 110 VAG-ADVQTLRERLIDALESHHDTWPPACPPLEPAXLEEIDGFFARNNEEYLALIFEXGGS----YLAREVALDLSQHKG 184 (244)
T ss_dssp CTT-CCHHHHHHHHHHHHHTCTTSCCTTSCCCSCCCHHHHHTHHHHCCCSEEEEEEECTTC----CHHHHHHHHTTTCTT
T ss_pred cCC-CCHHHHHHHHHHHHHhccccCCCCCCCcccccHHHHHHHhhcCCCceEEEEEEECCc----chHHHHHHHhccCCc
Confidence 444 5778777776553 2 1233444556666666433 344566655432 13444555555 45
Q ss_pred eEEEEEeCCCcchhhhhhhhCCCCCCcceEEEEecCCCeeecCC-CCCCHHHHHHHHHHHH
Q 031686 88 LLFVYSQIYPKLKGQIFDYFGVTCYTSRVIAVASIRKRKKYVLN-GELTLSNVKSFALDFL 147 (155)
Q Consensus 88 i~F~~vd~~~~~~~~~~~~~gl~~~~~P~v~i~~~~~~~kY~~~-~~~t~~~I~~Fi~~f~ 147 (155)
+.+..++..+ ..+++.||++. +|++++++.. ++.-.+. ..-+.+-+..|++.+.
T Consensus 185 i~v~~~~~~~---~~l~~~f~v~~--~Pslvl~~~~-g~~~~~~~~~~~r~~~~~~l~~~~ 239 (244)
T 3q6o_A 185 VAVRRVLNTE---ANVVRKFGVTD--FPSCYLLFRN-GSVSRVPVLMESRSFYTAYLQRLS 239 (244)
T ss_dssp EEEEEEETTC---HHHHHHHTCCC--SSEEEEEETT-SCEEECCCSSSSHHHHHHHHHTC-
T ss_pred eEEEEEeCch---HHHHHHcCCCC--CCeEEEEeCC-CCeEeeccccccHHHHHHHHHhCC
Confidence 7777777663 57899999985 8999999964 3322222 2345666777666553
No 149
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=96.10 E-value=0.033 Score=42.03 Aligned_cols=99 Identities=13% Similarity=0.017 Sum_probs=68.2
Q ss_pred CCCeEec-CCCchhhhhcC---CCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCC
Q 031686 40 IPPMITY-SRETTPLILNS---PLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCY 112 (155)
Q Consensus 40 ~P~v~e~-~~~~~~~i~~~---~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~ 112 (155)
...|.++ +.+++...... +.++++.|+..- .-.. ...|.++|++|.+ +.|+.+|.+. ..+.+.|++.
T Consensus 111 ~G~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~-v~f~kVd~d~---~~l~~~~~I~-- 184 (245)
T 1a0r_P 111 YGFVYELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYPM-VKFCKIKASN---TGAGDRFSSD-- 184 (245)
T ss_dssp CCSEEECCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCTT-SEEEEEEHHH---HCCTTSSCTT--
T ss_pred CCeEEEeCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCC-CEEEEEeCCc---HHHHHHCCCC--
Confidence 4467888 67777776643 445566666542 2345 6788999999875 9999999874 4567778876
Q ss_pred CcceEEEEecCCCee-ecCC------C-CCCHHHHHHHHHHH
Q 031686 113 TSRVIAVASIRKRKK-YVLN------G-ELTLSNVKSFALDF 146 (155)
Q Consensus 113 ~~P~v~i~~~~~~~k-Y~~~------~-~~t~~~I~~Fi~~f 146 (155)
.+|+++++.. |+. ..+. + +++.+.|..|+...
T Consensus 185 ~~PTll~~~~--G~~v~~~vG~~~~~g~~~~~e~Le~~L~~~ 224 (245)
T 1a0r_P 185 VLPTLLVYKG--GELLSNFISVTEQLAEEFFTGDVESFLNEY 224 (245)
T ss_dssp TCSEEEEEET--TEEEEEETTGGGGSCTTCCHHHHHHHHHTT
T ss_pred CCCEEEEEEC--CEEEEEEeCCcccccccccHHHHHHHHHHc
Confidence 4899998873 322 1111 2 47889999999875
No 150
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=96.02 E-value=0.09 Score=34.92 Aligned_cols=85 Identities=12% Similarity=0.057 Sum_probs=51.1
Q ss_pred CCCceEEEEeecC--ChhH-HHHHHHHHHhhcCc-eEEEEEeCCCcch--hh---------------------hhhhhCC
Q 031686 57 SPLKLLWLFAAVH--DSEA-KSIFQETARAFKGK-LLFVYSQIYPKLK--GQ---------------------IFDYFGV 109 (155)
Q Consensus 57 ~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~-i~F~~vd~~~~~~--~~---------------------~~~~~gl 109 (155)
.++++++.|.... .-.. ...+.+++++++++ +.|+.++.+.... .. +.+.||+
T Consensus 30 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i 109 (148)
T 3hcz_A 30 QAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKDEEWLKFIRSKKIGGWLNVRDSKNHTDFKITYDI 109 (148)
T ss_dssp CCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSHHHHHHHHHHTCTTSEEEECTTCCCCHHHHHCC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCHHHHHHHHHHcCCCCceEEeccccchhHHHhcCc
Confidence 3455666666442 2233 66788888888775 8888887774211 11 6667777
Q ss_pred CCCCcceEEEEecCCCeeecCCCCCCHHHHHHHHHHH
Q 031686 110 TCYTSRVIAVASIRKRKKYVLNGELTLSNVKSFALDF 146 (155)
Q Consensus 110 ~~~~~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f 146 (155)
. ..|++++++.+....+...+. +++.++++.+
T Consensus 110 ~--~~P~~~lid~~G~i~~~~~g~---~~~~~~l~~l 141 (148)
T 3hcz_A 110 Y--ATPVLYVLDKNKVIIAKRIGY---ENLDDFLVQY 141 (148)
T ss_dssp C--SSCEEEEECTTCBEEEESCCG---GGHHHHHHHH
T ss_pred C--CCCEEEEECCCCcEEEecCCH---HHHHHHHHHH
Confidence 5 389999998754334444333 4455555444
No 151
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=95.93 E-value=0.21 Score=33.58 Aligned_cols=86 Identities=13% Similarity=0.062 Sum_probs=57.8
Q ss_pred CCceEEEEeecC--C--hhH-HHHHHHHHHhh-cCc-eEEEEEeCCCcc-----------------------hhhhhhhh
Q 031686 58 PLKLLWLFAAVH--D--SEA-KSIFQETARAF-KGK-LLFVYSQIYPKL-----------------------KGQIFDYF 107 (155)
Q Consensus 58 ~~~~v~lf~~~~--~--~~~-~~~~~~vA~~~-~~~-i~F~~vd~~~~~-----------------------~~~~~~~~ 107 (155)
++++++.|.... . -.. ...+.++++++ +++ +.++.++.+... ...+.+.|
T Consensus 33 gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 112 (150)
T 3fw2_A 33 QKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVAKQY 112 (150)
T ss_dssp TSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHT
T ss_pred CCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHHHHc
Confidence 455666666542 4 355 77888999998 654 888887776421 12566778
Q ss_pred CCCCCCcceEEEEecCCCeeecCCCCCCHHHHHHHHHHHHc
Q 031686 108 GVTCYTSRVIAVASIRKRKKYVLNGELTLSNVKSFALDFLG 148 (155)
Q Consensus 108 gl~~~~~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~~ 148 (155)
|+. ..|++.+++.+..-.+.. .+.+.+.+.|+.+++
T Consensus 113 ~v~--~~P~~~lid~~G~i~~~~---~~~~~l~~~l~~ll~ 148 (150)
T 3fw2_A 113 SIY--KIPANILLSSDGKILAKN---LRGEELKKKIENIVE 148 (150)
T ss_dssp TCC--SSSEEEEECTTSBEEEES---CCHHHHHHHHHHHHH
T ss_pred CCC--ccCeEEEECCCCEEEEcc---CCHHHHHHHHHHHHh
Confidence 876 489999998753333432 378889888887764
No 152
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=95.82 E-value=0.011 Score=41.39 Aligned_cols=96 Identities=13% Similarity=-0.015 Sum_probs=55.9
Q ss_pred hhhhhcCCCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhh-hhhhhCCCCCCcceEEEEecCCCe
Q 031686 51 TPLILNSPLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQ-IFDYFGVTCYTSRVIAVASIRKRK 126 (155)
Q Consensus 51 ~~~i~~~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~-~~~~~gl~~~~~P~v~i~~~~~~~ 126 (155)
+......++++++.|...- .-.. ...|.++++.+...+.|+.++.+. ... ....+++....+|++++++.+...
T Consensus 39 ~~~~~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~~~~~~v~~d~--~~~~~~~~~~~~~~~~Pt~~~~d~~G~~ 116 (164)
T 1sen_A 39 KKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLED--EEEPKDEDFSPDGGYIPRILFLDPSGKV 116 (164)
T ss_dssp HHHHHHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHHTTSEEEEEEG--GGSCSCGGGCTTCSCSSEEEEECTTSCB
T ss_pred HHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCeEEEEEecC--CchHHHHHhcccCCcCCeEEEECCCCCE
Confidence 3344445667776676442 1123 445666555544445566666553 223 566777765569999999754322
Q ss_pred eecCCC----------CCCHHHHHHHHHHHHc
Q 031686 127 KYVLNG----------ELTLSNVKSFALDFLG 148 (155)
Q Consensus 127 kY~~~~----------~~t~~~I~~Fi~~f~~ 148 (155)
...+.| ..+.+.|.++|+..++
T Consensus 117 ~~~~~G~~~~~~~~~~~~~~~~l~~~l~~~l~ 148 (164)
T 1sen_A 117 HPEIINENGNPSYKYFYVSAEQVVQGMKEAQE 148 (164)
T ss_dssp CTTCCCTTSCTTSTTCCCSHHHHHHHHHHHHH
T ss_pred EEEEeCCCCccchhcccCCHHHHHHHHHHHHH
Confidence 333333 2678888888887764
No 153
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=95.72 E-value=0.076 Score=35.75 Aligned_cols=87 Identities=17% Similarity=0.090 Sum_probs=53.7
Q ss_pred CCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCc---------------------chhhhhhhhCCCCCC
Q 031686 58 PLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPK---------------------LKGQIFDYFGVTCYT 113 (155)
Q Consensus 58 ~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~---------------------~~~~~~~~~gl~~~~ 113 (155)
+++.++.|.... .-.. ...+.+++++ +++.|+.++.+.. ....+.+.||+..
T Consensus 42 gk~~ll~f~~~~C~~C~~~~~~l~~l~~~--~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~-- 117 (156)
T 1kng_A 42 GKVSLVNVWASWCVPCHDEAPLLTELGKD--KRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWGVYG-- 117 (156)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHTTC--TTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTTCCS--
T ss_pred CCEEEEEEEcccCHhHHHHHHHHHHHHhc--CCeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcCcCc--
Confidence 456666666543 1233 5556666655 4577777664321 0234566778763
Q ss_pred cceEEEEecCCCeeecCCCCCCHHHHHHHHHHHHc
Q 031686 114 SRVIAVASIRKRKKYVLNGELTLSNVKSFALDFLG 148 (155)
Q Consensus 114 ~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~~ 148 (155)
+|++.+++.+....+.+.|..+.+.+.++++..++
T Consensus 118 ~P~~~~id~~G~i~~~~~g~~~~~~l~~~l~~~l~ 152 (156)
T 1kng_A 118 VPETFVVGREGTIVYKLVGPITPDNLRSVLLPQME 152 (156)
T ss_dssp SCEEEEECTTSBEEEEEESCCCHHHHHHTHHHHHH
T ss_pred cCeEEEEcCCCCEEEEEeCCCCHHHHHHHHHHHHH
Confidence 89888888653334445577889999999988764
No 154
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=95.68 E-value=0.11 Score=36.46 Aligned_cols=93 Identities=12% Similarity=0.124 Sum_probs=58.9
Q ss_pred CCceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCc---------------------------chhhhhhhh
Q 031686 58 PLKLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPK---------------------------LKGQIFDYF 107 (155)
Q Consensus 58 ~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~---------------------------~~~~~~~~~ 107 (155)
++++++.|.... .-.. ...+.++++++++++.++.++.+.. ....+.+.|
T Consensus 33 gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 112 (188)
T 2cvb_A 33 EPLLAVVFMCNHCPYVKGSIGELVALAERYRGKVAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDETQEVAKAY 112 (188)
T ss_dssp SSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTTEEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSSHHHHHT
T ss_pred CCEEEEEEECCCCccHHHHHHHHHHHHHHhhcCeEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCcchHHHHc
Confidence 345566666432 1233 6678888888887677777776310 123456677
Q ss_pred CCCCCCcceEEEEecCCCeeec--C------CCCCCHHHHHHHHHHHHcCCCc
Q 031686 108 GVTCYTSRVIAVASIRKRKKYV--L------NGELTLSNVKSFALDFLGDKLR 152 (155)
Q Consensus 108 gl~~~~~P~v~i~~~~~~~kY~--~------~~~~t~~~I~~Fi~~f~~Gkl~ 152 (155)
|+. ..|++.+++.+..-.|. . .+..+.+.|.+.|+..++|+-.
T Consensus 113 ~v~--~~P~~~lid~~G~i~~~g~~~~~~~~~g~~~~~~l~~~i~~ll~~~~~ 163 (188)
T 2cvb_A 113 RAL--RTPEVFLFDERRLLRYHGRVNDNPKDPSKVQSHDLEAAIEALLRGEEP 163 (188)
T ss_dssp TCC--EESEEEEECTTCBEEEEECSSSCTTCGGGCCCCHHHHHHHHHHTTCCC
T ss_pred CCC--CCCeEEEECCCCcEEEEEecCCccccccccCHHHHHHHHHHHHcCCCC
Confidence 775 37999999865333343 1 1234788999999999988643
No 155
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=95.52 E-value=0.19 Score=35.02 Aligned_cols=94 Identities=11% Similarity=0.006 Sum_probs=58.6
Q ss_pred CCceEEEEeecC-C-hhH-HHHHHHHHHhhc-CceEEEEEeCCCc---chhhhhhhhCCCC-------------------
Q 031686 58 PLKLLWLFAAVH-D-SEA-KSIFQETARAFK-GKLLFVYSQIYPK---LKGQIFDYFGVTC------------------- 111 (155)
Q Consensus 58 ~~~~v~lf~~~~-~-~~~-~~~~~~vA~~~~-~~i~F~~vd~~~~---~~~~~~~~~gl~~------------------- 111 (155)
++++++.|.... . -.. ...+.+++++++ ..+.++.++.+.. ....+++.+|++.
T Consensus 60 gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 139 (186)
T 1jfu_A 60 GKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAIG 139 (186)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHHTTT
T ss_pred CCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHhcccc
Confidence 445566666432 1 234 667888888887 4577777766532 1345566666630
Q ss_pred --CCcceEEEEecCCCeeecCCC--CCCHHHHHHHHHHHHcCCC
Q 031686 112 --YTSRVIAVASIRKRKKYVLNG--ELTLSNVKSFALDFLGDKL 151 (155)
Q Consensus 112 --~~~P~v~i~~~~~~~kY~~~~--~~t~~~I~~Fi~~f~~Gkl 151 (155)
..+|++.+++.+..-.+.+.| +.+.+.+.++|+..+.++.
T Consensus 140 ~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll~~~a 183 (186)
T 1jfu_A 140 RALGMPTSVLVDPQGCEIATIAGPAEWASEDALKLIRAATGKAA 183 (186)
T ss_dssp CCSSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHHHHHC---
T ss_pred ccCCCCEEEEECCCCCEEEEEecCCccCHHHHHHHHHHHhcccc
Confidence 158999999875433444444 3468899999999988753
No 156
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=95.37 E-value=0.28 Score=35.62 Aligned_cols=93 Identities=15% Similarity=0.183 Sum_probs=61.4
Q ss_pred CCc-eEEEEeecC-C-hhH-HHHHHHHHHhhcCc-eEEEEEeCCCc---------------------------chhhhhh
Q 031686 58 PLK-LLWLFAAVH-D-SEA-KSIFQETARAFKGK-LLFVYSQIYPK---------------------------LKGQIFD 105 (155)
Q Consensus 58 ~~~-~v~lf~~~~-~-~~~-~~~~~~vA~~~~~~-i~F~~vd~~~~---------------------------~~~~~~~ 105 (155)
+++ +++.|.... . -.. ...+.+++++++++ +.|+.++.+.. ....+.+
T Consensus 58 gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 137 (218)
T 3u5r_E 58 DSPALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDASQSVAK 137 (218)
T ss_dssp TCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTTCHHHH
T ss_pred CCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECCccHHHH
Confidence 344 455565432 1 234 67888899999875 88887777411 1245667
Q ss_pred hhCCCCCCcceEEEEecCCCeeec--CC-------CCCCHHHHHHHHHHHHcCCCc
Q 031686 106 YFGVTCYTSRVIAVASIRKRKKYV--LN-------GELTLSNVKSFALDFLGDKLR 152 (155)
Q Consensus 106 ~~gl~~~~~P~v~i~~~~~~~kY~--~~-------~~~t~~~I~~Fi~~f~~Gkl~ 152 (155)
.||+.. .|++.+++.+..-.|. ++ +..+.+.|++.|+.+++|+-.
T Consensus 138 ~~~v~~--~P~~~liD~~G~i~~~g~~d~~~~~~~~~~~~~~l~~~i~~ll~~~~~ 191 (218)
T 3u5r_E 138 AYGAAC--TPDFFLYDRERRLVYHGQFDDARPGNGKDVTGADLRAAVDAVLKGKDV 191 (218)
T ss_dssp HHTCCE--ESEEEEECTTCBEEEEECSSSCCTTSCCCCCCHHHHHHHHHHHTTCCC
T ss_pred HcCCCC--CCeEEEECCCCcEEEeccccccccccccccCHHHHHHHHHHHHcCCCC
Confidence 788763 7999999875333442 11 246789999999999998643
No 157
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=95.36 E-value=0.051 Score=38.02 Aligned_cols=67 Identities=10% Similarity=0.144 Sum_probs=48.7
Q ss_pred HHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCcceEEEEecCCCe-eecCCCCCCHHHHHHHHHHHHc
Q 031686 79 ETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTSRVIAVASIRKRK-KYVLNGELTLSNVKSFALDFLG 148 (155)
Q Consensus 79 ~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~P~v~i~~~~~~~-kY~~~~~~t~~~I~~Fi~~f~~ 148 (155)
+|++..+.+++++.+|.+..+...+++.|++.. .|++++++..+++ ...+.+ ++++.+.++++.+++
T Consensus 69 ~V~~~l~~~fv~v~~d~~~~~~~~l~~~y~v~~--~P~~~fld~~~G~~l~~~~g-~~~~~fl~~L~~~l~ 136 (153)
T 2dlx_A 69 AVKNIIREHFIFWQVYHDSEEGQRYIQFYKLGD--FPYVSILDPRTGQKLVEWHQ-LDVSSFLDQVTGFLG 136 (153)
T ss_dssp HHHHHHHHTEEEEEEESSSHHHHHHHHHHTCCS--SSEEEEECTTTCCCCEEESS-CCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCeEEEEEecCCHhHHHHHHHcCCCC--CCEEEEEeCCCCcEeeecCC-CCHHHHHHHHHHHHH
Confidence 455444457899999997655667889999864 8999999986442 222345 899998888888864
No 158
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=95.30 E-value=0.27 Score=40.90 Aligned_cols=94 Identities=10% Similarity=0.039 Sum_probs=60.3
Q ss_pred eccCCcCHHHHHHHHHhC----C------CCCeEecCCCchhhhhcCCC--ceEEEEeecCChhHHHHHHHHHHhhc--C
Q 031686 21 FSDVSFTISVIDDFISLN----K------IPPMITYSRETTPLILNSPL--KLLWLFAAVHDSEAKSIFQETARAFK--G 86 (155)
Q Consensus 21 ~y~g~~~~~~l~~fI~~~----~------~P~v~e~~~~~~~~i~~~~~--~~v~lf~~~~~~~~~~~~~~vA~~~~--~ 86 (155)
.+.|..+.++|.+||.+. . .|.+..++.+++..++.... +++++|.+.+. ...++++..+. .
T Consensus 108 ~~~g~~~~~~L~~~l~~~l~~~~~~~P~~~p~l~~it~~~l~~~l~~~~~~~vallF~~~~s----~~~~~~~ldl~~~~ 183 (519)
T 3t58_A 108 LPGAGANVQTLRMRLIDALESHRDTWPPACPPLEPAKLNDIDGFFTRNKADYLALVFEREDS----YLGREVTLDLSQYH 183 (519)
T ss_dssp ECCSSCCHHHHHHHHHHHHTTCCSCCCTTCCCCSBCCHHHHTTGGGSCCCSEEEEEEECTTC----CHHHHHHHHTTTCT
T ss_pred EecCCCCHHHHHHHHHHHHhhccccCCCCCCccCcCCHHHHHHHhccCCCCeEEEEecCCch----HHHHHHHHHhhccC
Confidence 345667888888777553 2 23345566667777776543 33555554432 13455666665 3
Q ss_pred ceEEEEEeCCCcchhhhhhhhCCCCCCcceEEEEecC
Q 031686 87 KLLFVYSQIYPKLKGQIFDYFGVTCYTSRVIAVASIR 123 (155)
Q Consensus 87 ~i~F~~vd~~~~~~~~~~~~~gl~~~~~P~v~i~~~~ 123 (155)
.+.+..++..+ ..+++.||++. +|++++++..
T Consensus 184 ~v~v~~v~~~~---~~l~~kfgV~~--~Pslvl~~~n 215 (519)
T 3t58_A 184 AVAVRRVLNTE---SDLVNKFGVTD--FPSCYLLLRN 215 (519)
T ss_dssp TEEEEEEETTC---HHHHHHHTCCC--SSEEEEEETT
T ss_pred CeeEEEecCch---HHHHHHcCCCC--CCeEEEEeCC
Confidence 47777776653 57889999984 8999999864
No 159
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=95.18 E-value=0.21 Score=33.66 Aligned_cols=91 Identities=9% Similarity=0.019 Sum_probs=58.2
Q ss_pred CCceEEEEeecC-C--hhH-HHHHHHHHHhhcC-ceEEEEEeCCCc--------------------------chh-----
Q 031686 58 PLKLLWLFAAVH-D--SEA-KSIFQETARAFKG-KLLFVYSQIYPK--------------------------LKG----- 101 (155)
Q Consensus 58 ~~~~v~lf~~~~-~--~~~-~~~~~~vA~~~~~-~i~F~~vd~~~~--------------------------~~~----- 101 (155)
++++++.|.... . ... ...+.++++++++ .+.|+.++.+.. ...
T Consensus 28 gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 107 (158)
T 3eyt_A 28 GKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQPGDGAMP 107 (158)
T ss_dssp TSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCSSSSC
T ss_pred CCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCccchhhH
Confidence 445555565432 1 222 4567777888874 477777664200 001
Q ss_pred hhhhhhCCCCCCcceEEEEecCCCeeecCCCCCCHHHHHHHHHHHHcCC
Q 031686 102 QIFDYFGVTCYTSRVIAVASIRKRKKYVLNGELTLSNVKSFALDFLGDK 150 (155)
Q Consensus 102 ~~~~~~gl~~~~~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~~Gk 150 (155)
.+.+.||+.. .|++.+++.+..-.+...|..+.+.|.+.|+..++.+
T Consensus 108 ~~~~~~~v~~--~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~~ 154 (158)
T 3eyt_A 108 RTMAAYQMRG--TPSLLLIDKAGDLRAHHFGDVSELLLGAEIATLLGEA 154 (158)
T ss_dssp HHHHHTTCCS--SSEEEEECTTSEEEEEEESCCCHHHHHHHHHHHHTSC
T ss_pred HHHHHcCCCC--CCEEEEECCCCCEEEEEeCCCCHHHHHHHHHHHhccC
Confidence 4677888754 8999999875333455557789999999999998764
No 160
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=95.15 E-value=0.35 Score=32.73 Aligned_cols=86 Identities=15% Similarity=0.179 Sum_probs=54.3
Q ss_pred CCCceEEEEeecC-C-hhH-HHHHHHHHHhhc-CceEEEEEeCCCc-----------------chhhhhhhhCCCCCCcc
Q 031686 57 SPLKLLWLFAAVH-D-SEA-KSIFQETARAFK-GKLLFVYSQIYPK-----------------LKGQIFDYFGVTCYTSR 115 (155)
Q Consensus 57 ~~~~~v~lf~~~~-~-~~~-~~~~~~vA~~~~-~~i~F~~vd~~~~-----------------~~~~~~~~~gl~~~~~P 115 (155)
.++++++.|.... . -.. ...+.++++++. ..+.|+.++.+.. ....+.+.||+.. .|
T Consensus 40 ~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~--~P 117 (158)
T 3hdc_A 40 RGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYGANR--LP 117 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHTTCCS--SS
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHhCCCC--cc
Confidence 3456666676443 1 234 677888999987 5688888887641 1246678888864 89
Q ss_pred eEEEEecCCCeeecCCC--CCCHHHHHHHHH
Q 031686 116 VIAVASIRKRKKYVLNG--ELTLSNVKSFAL 144 (155)
Q Consensus 116 ~v~i~~~~~~~kY~~~~--~~t~~~I~~Fi~ 144 (155)
++++++.+..-.+.+.| +.+..++.+.+.
T Consensus 118 ~~~lid~~G~i~~~~~G~~~~~~~~~~~~~~ 148 (158)
T 3hdc_A 118 DTFIVDRKGIIRQRVTGGIEWDAPKVVSYLK 148 (158)
T ss_dssp EEEEECTTSBEEEEEESCCCTTSHHHHHHHH
T ss_pred eEEEEcCCCCEEEEEeCCCccchHHHHHHHH
Confidence 99999875433444444 345555555444
No 161
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=94.81 E-value=0.18 Score=29.74 Aligned_cols=57 Identities=14% Similarity=0.083 Sum_probs=43.3
Q ss_pred HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCcceEEEEecCCCee-ecCCCCC-CHHHHHHHH
Q 031686 74 KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTSRVIAVASIRKRKK-YVLNGEL-TLSNVKSFA 143 (155)
Q Consensus 74 ~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~P~v~i~~~~~~~k-Y~~~~~~-t~~~I~~Fi 143 (155)
...+.++++++.+++.++.+| + ..+.+.+|+.. .|++++ + |+. +. |.. +.+.|.+++
T Consensus 18 ~~~l~~~~~~~~~~~~~~~v~-~----~~~~~~~~v~~--~Pt~~~-~---G~~~~~--G~~~~~~~l~~~l 76 (77)
T 1ilo_A 18 EKNAREAVKELGIDAEFEKIK-E----MDQILEAGLTA--LPGLAV-D---GELKIM--GRVASKEEIKKIL 76 (77)
T ss_dssp HHHHHHHHHHTTCCEEEEEEC-S----HHHHHHHTCSS--SSCEEE-T---TEEEEC--SSCCCHHHHHHHC
T ss_pred HHHHHHHHHHcCCceEEEEec-C----HHHHHHCCCCc--CCEEEE-C---CEEEEc--CCCCCHHHHHHHh
Confidence 677889999998889999988 2 46778899874 899988 3 432 32 665 888888875
No 162
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=94.70 E-value=0.16 Score=34.85 Aligned_cols=87 Identities=11% Similarity=-0.028 Sum_probs=51.8
Q ss_pred CCCceEEEEeecC-C-hhH-HHHHHHHHHhhcCceEEEEEeCCC---------------------cchhhhhhhhCCCCC
Q 031686 57 SPLKLLWLFAAVH-D-SEA-KSIFQETARAFKGKLLFVYSQIYP---------------------KLKGQIFDYFGVTCY 112 (155)
Q Consensus 57 ~~~~~v~lf~~~~-~-~~~-~~~~~~vA~~~~~~i~F~~vd~~~---------------------~~~~~~~~~~gl~~~ 112 (155)
.++++++.|.... . -.. ...+.+++++ ++.++.++.+. .....+.+.||+..
T Consensus 50 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~---~v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~- 125 (168)
T 2b1k_A 50 QGKPVLLNVWATWCPTCRAEHQYLNQLSAQ---GIRVVGMNYKDDRQKAISWLKELGNPYALSLFDGDGMLGLDLGVYG- 125 (168)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT---TCCEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTCHHHHHHTCCS-
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHC---CCEEEEEECCCChHHHHHHHHHcCCCCceeeECcchHHHHHcCccc-
Confidence 4556666666432 1 123 5556666665 45555554221 01235667778764
Q ss_pred CcceEEEEecCCCeeecCCCCCCHHHHHHHHHHHHc
Q 031686 113 TSRVIAVASIRKRKKYVLNGELTLSNVKSFALDFLG 148 (155)
Q Consensus 113 ~~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~~ 148 (155)
.|+..+++.+....+.+.|..+.+.+.++++..++
T Consensus 126 -~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 160 (168)
T 2b1k_A 126 -APETFLIDGNGIIRYRHAGDLNPRVWEEEIKPLWE 160 (168)
T ss_dssp -SSEEEEECTTSBEEEEEESCCCHHHHHHTTHHHHH
T ss_pred -cCEEEEECCCCeEEEEEeCCCCHHHHHHHHHHHHH
Confidence 89888888653334555567888888888887654
No 163
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=94.00 E-value=0.4 Score=37.90 Aligned_cols=89 Identities=10% Similarity=-0.020 Sum_probs=59.1
Q ss_pred CCceEEEEeecC--ChhH-HHHHHHHHHhhcC-ceEEEEEeCCCc-------------------------chhhhhhhhC
Q 031686 58 PLKLLWLFAAVH--DSEA-KSIFQETARAFKG-KLLFVYSQIYPK-------------------------LKGQIFDYFG 108 (155)
Q Consensus 58 ~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~-~i~F~~vd~~~~-------------------------~~~~~~~~~g 108 (155)
++++++.|.... .-.. ...+.++++++++ .+.++.++.+.. ....+.+.||
T Consensus 82 GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~yg 161 (352)
T 2hyx_A 82 GKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWTNYR 161 (352)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHHHTT
T ss_pred CCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHHHHcC
Confidence 455666666432 1234 6678888999876 488888765320 0134566677
Q ss_pred CCCCCcceEEEEecCCCeeecCCCCCCHHHHHHHHHHHHc
Q 031686 109 VTCYTSRVIAVASIRKRKKYVLNGELTLSNVKSFALDFLG 148 (155)
Q Consensus 109 l~~~~~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~~ 148 (155)
+. ..|++.+++.+....+.+.+..+.+.|.++|+..+.
T Consensus 162 V~--~~Pt~~lID~~G~Iv~~~~G~~~~~~l~~~I~~lL~ 199 (352)
T 2hyx_A 162 NR--YWPAEYLIDATGTVRHIKFGEGDYNVTETLVRQLLN 199 (352)
T ss_dssp CC--EESEEEEECTTSBEEEEEESBCCHHHHHHHHHHHHH
T ss_pred CC--ccCEEEEEeCCCeEEEEEcCCCCHHHHHHHHHHHHh
Confidence 75 379999998754334555566789999999998875
No 164
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=93.96 E-value=0.53 Score=31.77 Aligned_cols=89 Identities=12% Similarity=0.086 Sum_probs=52.7
Q ss_pred CCceEEEEeecC--C-hhH-HHHHHHHHHhhcC-----ceEEEEEeCCCc-c-------------------------hhh
Q 031686 58 PLKLLWLFAAVH--D-SEA-KSIFQETARAFKG-----KLLFVYSQIYPK-L-------------------------KGQ 102 (155)
Q Consensus 58 ~~~~v~lf~~~~--~-~~~-~~~~~~vA~~~~~-----~i~F~~vd~~~~-~-------------------------~~~ 102 (155)
++++++.|.... . -.. ...+.++++++++ ++.++.++.+.. + ...
T Consensus 23 gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~~ 102 (164)
T 2ggt_A 23 GQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTREEVDQ 102 (164)
T ss_dssp TCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEEECCHHHHHH
T ss_pred CCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHHH
Confidence 345555555432 2 234 6667777777653 566666555421 0 113
Q ss_pred hhhhhCCCCCCcc---------------eEEEEecCCCeeecCCCCCCHHHHHHHHHHHHc
Q 031686 103 IFDYFGVTCYTSR---------------VIAVASIRKRKKYVLNGELTLSNVKSFALDFLG 148 (155)
Q Consensus 103 ~~~~~gl~~~~~P---------------~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~~ 148 (155)
+.+.||+.. .| ++.+++.+..-.+.+.+..+.+.|.+.|+..+.
T Consensus 103 ~~~~~~v~~--~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 161 (164)
T 2ggt_A 103 VARAYRVYY--SPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIAASIATHMR 161 (164)
T ss_dssp HHHTTTCCE--EEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTCCHHHHHHHHHHHHG
T ss_pred HHHhcCeEE--EecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 556677653 46 788888754334444566788999999988764
No 165
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=93.57 E-value=0.69 Score=32.64 Aligned_cols=97 Identities=13% Similarity=0.094 Sum_probs=55.4
Q ss_pred CCceEEEEe-ecC--ChhH-HHHHHHHHHhhcC-ceEEEEEeCCCcc-----------------------hhhhhhhhCC
Q 031686 58 PLKLLWLFA-AVH--DSEA-KSIFQETARAFKG-KLLFVYSQIYPKL-----------------------KGQIFDYFGV 109 (155)
Q Consensus 58 ~~~~v~lf~-~~~--~~~~-~~~~~~vA~~~~~-~i~F~~vd~~~~~-----------------------~~~~~~~~gl 109 (155)
++++++.|. ... .-.. ...+.++++++++ .+.++.++.+... ...+.+.||+
T Consensus 45 gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 124 (195)
T 2bmx_A 45 GKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAAGV 124 (195)
T ss_dssp TCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHHTC
T ss_pred CCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHHhCC
Confidence 345566665 322 1233 6677777777765 4777776665310 1245566777
Q ss_pred CC---CCcceEEEEecCCCeeecCCC----CCCHHHHHHHHHHHHcCCCccC
Q 031686 110 TC---YTSRVIAVASIRKRKKYVLNG----ELTLSNVKSFALDFLGDKLRNQ 154 (155)
Q Consensus 110 ~~---~~~P~v~i~~~~~~~kY~~~~----~~t~~~I~~Fi~~f~~Gkl~p~ 154 (155)
.. ...|++.+++.+..-.+...+ +-+.+.|.+.|+.+..|...|-
T Consensus 125 ~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~~~~~p~ 176 (195)
T 2bmx_A 125 LNADGVADRVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDALQSDELCAS 176 (195)
T ss_dssp BCTTSSBCEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHC------
T ss_pred cccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHHhhCCCcCc
Confidence 51 147999999875332333322 2378999999999998877663
No 166
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=93.52 E-value=0.48 Score=31.19 Aligned_cols=85 Identities=9% Similarity=0.086 Sum_probs=47.9
Q ss_pred CCceEEEEeecC-C-hhH-HHHHHH---HHHhhcC-ceEEEEEeCCCcc--hhhh--------------------hhhhC
Q 031686 58 PLKLLWLFAAVH-D-SEA-KSIFQE---TARAFKG-KLLFVYSQIYPKL--KGQI--------------------FDYFG 108 (155)
Q Consensus 58 ~~~~v~lf~~~~-~-~~~-~~~~~~---vA~~~~~-~i~F~~vd~~~~~--~~~~--------------------~~~~g 108 (155)
++++++.|.... . -.. ...+.+ +++++++ .+.++.++.+... .... .+.||
T Consensus 27 gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 106 (142)
T 3ewl_A 27 AQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREEWATKAVYMPQGWIVGWNKAGDIRTRQLYD 106 (142)
T ss_dssp CSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHHHHHHHTTSCTTCEEEECTTCHHHHTTCSC
T ss_pred CCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHHHHHHHHHcCCCcceeeCCccchhhHHHcC
Confidence 445566665432 1 122 333444 6777654 3777777766321 1111 22566
Q ss_pred CCCCCcceEEEEecCCCeeecCCCCCCHHHHHHHHHHHH
Q 031686 109 VTCYTSRVIAVASIRKRKKYVLNGELTLSNVKSFALDFL 147 (155)
Q Consensus 109 l~~~~~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~ 147 (155)
+. ..|++.+++.+..-.+ +..+.++|++++++..
T Consensus 107 v~--~~P~~~lid~~G~i~~---~~~~~~~l~~~l~~~~ 140 (142)
T 3ewl_A 107 IR--ATPTIYLLDGRKRVIL---KDTSMEQLIDYLATQA 140 (142)
T ss_dssp CC--SSSEEEEECTTCBEEE---CSCCHHHHHHHHHC--
T ss_pred CC--CCCeEEEECCCCCEEe---cCCCHHHHHHHHHHHc
Confidence 65 4899999986532233 3578999999998754
No 167
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=93.31 E-value=1.2 Score=30.00 Aligned_cols=88 Identities=10% Similarity=0.040 Sum_probs=53.0
Q ss_pred CCceEEEEeecC--ChhH-HHHHHHHHHhhcCc-eEEEEEeCCCcch------------------h---hhhhhhCCCCC
Q 031686 58 PLKLLWLFAAVH--DSEA-KSIFQETARAFKGK-LLFVYSQIYPKLK------------------G---QIFDYFGVTCY 112 (155)
Q Consensus 58 ~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~-i~F~~vd~~~~~~------------------~---~~~~~~gl~~~ 112 (155)
++++++.|.... .-.. ...+.+++++++++ +.++.++.+.... . .+.+.||+..
T Consensus 35 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~- 113 (152)
T 2lrt_A 35 GKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYISLYNVTN- 113 (152)
T ss_dssp GSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHHHHHTCCS-
T ss_pred CCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHHHHcCccc-
Confidence 345666666442 1234 67788888888765 8888887764210 0 1667788863
Q ss_pred CcceEEEEecCCCeeecCCCCCCHHHHHHHHHHHHcCC
Q 031686 113 TSRVIAVASIRKRKKYVLNGELTLSNVKSFALDFLGDK 150 (155)
Q Consensus 113 ~~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~~Gk 150 (155)
.|++++++.+..-.+...|..+ +++-+..-++|.
T Consensus 114 -~P~~~lid~~G~i~~~~~g~~~---~e~~~~~~~~~~ 147 (152)
T 2lrt_A 114 -LPSVFLVNRNNELSARGENIKD---LDEAIKKLLEGH 147 (152)
T ss_dssp -CSEEEEEETTTEEEEETTTCSC---HHHHHHHHHGGG
T ss_pred -CceEEEECCCCeEEEecCCHHH---HHHHHHHHHhcc
Confidence 8999999975333444444333 444445555553
No 168
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=92.93 E-value=1.4 Score=29.79 Aligned_cols=91 Identities=12% Similarity=0.058 Sum_probs=54.6
Q ss_pred CCceEEEEeecC--C-hhH-HHHHHHHHHhhc-----CceEEEEEeCCCc-c-------------------------hhh
Q 031686 58 PLKLLWLFAAVH--D-SEA-KSIFQETARAFK-----GKLLFVYSQIYPK-L-------------------------KGQ 102 (155)
Q Consensus 58 ~~~~v~lf~~~~--~-~~~-~~~~~~vA~~~~-----~~i~F~~vd~~~~-~-------------------------~~~ 102 (155)
++++++.|.... . -.. ...+.+++++++ .++.++.++.+.. + ...
T Consensus 26 gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 105 (171)
T 2rli_A 26 GQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGSTKQVAQ 105 (171)
T ss_dssp TSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCEEECCHHHHHH
T ss_pred CCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHHH
Confidence 345555555442 2 244 667788888774 3677776665520 0 124
Q ss_pred hhhhhCCCCC-------------CcceEEEEecCCCeeecCCCCCCHHHHHHHHHHHHc
Q 031686 103 IFDYFGVTCY-------------TSRVIAVASIRKRKKYVLNGELTLSNVKSFALDFLG 148 (155)
Q Consensus 103 ~~~~~gl~~~-------------~~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~~ 148 (155)
+.+.||+... ..|++.+++.+..-.+.+.+..+.+.|.+.|+..+.
T Consensus 106 ~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 164 (171)
T 2rli_A 106 ASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSRSAEQISDSVRRHMA 164 (171)
T ss_dssp HHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSCCHHHHHHHHHHHHH
T ss_pred HHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 5667777521 123888888754334444566788889888888765
No 169
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=92.03 E-value=1.4 Score=29.65 Aligned_cols=37 Identities=5% Similarity=-0.015 Sum_probs=27.4
Q ss_pred cceEEEEecCCCeeecCCCCCCHHHHHHHHHHHHcCC
Q 031686 114 SRVIAVASIRKRKKYVLNGELTLSNVKSFALDFLGDK 150 (155)
Q Consensus 114 ~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~~Gk 150 (155)
.|...+++.+..-.+.+.+..+++.|.+.|+..+++|
T Consensus 133 ~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~k 169 (169)
T 2v1m_A 133 NFSKFLVDRQGQPVKRYSPTTAPYDIEGDIMELLEKK 169 (169)
T ss_dssp TTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHHHCC
T ss_pred cceEEEECCCCCEEEEcCCCCCHHHHHHHHHHHhccC
Confidence 4788888875433455566778899999999988764
No 170
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=91.63 E-value=0.69 Score=32.12 Aligned_cols=45 Identities=7% Similarity=-0.083 Sum_probs=32.2
Q ss_pred hhhhhhCCCCCCcceEEEEecCCCeeecCCCCCCHHHHHHHHHHHHc
Q 031686 102 QIFDYFGVTCYTSRVIAVASIRKRKKYVLNGELTLSNVKSFALDFLG 148 (155)
Q Consensus 102 ~~~~~~gl~~~~~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~~ 148 (155)
.+.+.||+. ..|+..+++.+..-.+.+.+..+.+.+.+++..+++
T Consensus 123 ~~~~~~~v~--~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 167 (176)
T 3kh7_A 123 TLGLDLGVY--GAPETYLIDKQGIIRHKIVGVVDQKVWREQLAPLYQ 167 (176)
T ss_dssp HHHHHHTCC--SSCEEEEECTTCBEEEEEESCCCHHHHHHHTHHHHH
T ss_pred hHHHHcCCC--CCCeEEEECCCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 455667775 379999998754345555667888888888888765
No 171
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=91.39 E-value=2 Score=29.42 Aligned_cols=64 Identities=6% Similarity=0.074 Sum_probs=42.9
Q ss_pred CCceEEEEeecC--ChhH-HHHHHHHHHhhcC--ceEEEEEeCCCcch----------------------hhhhhhhCCC
Q 031686 58 PLKLLWLFAAVH--DSEA-KSIFQETARAFKG--KLLFVYSQIYPKLK----------------------GQIFDYFGVT 110 (155)
Q Consensus 58 ~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~--~i~F~~vd~~~~~~----------------------~~~~~~~gl~ 110 (155)
++++++.|...- .-.. ...+.++++++++ ++.++.++.+.... ..+.+.||+.
T Consensus 48 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~ 127 (165)
T 3s9f_A 48 GKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYSVE 127 (165)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTCC
T ss_pred CCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcCCC
Confidence 455666666432 1234 6778889999875 67777776654211 4667788886
Q ss_pred CCCcceEEEEecC
Q 031686 111 CYTSRVIAVASIR 123 (155)
Q Consensus 111 ~~~~P~v~i~~~~ 123 (155)
.+|++++++.+
T Consensus 128 --~~Pt~~lid~~ 138 (165)
T 3s9f_A 128 --SIPTLIGLNAD 138 (165)
T ss_dssp --SSSEEEEEETT
T ss_pred --CCCEEEEEeCC
Confidence 48999999964
No 172
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=91.30 E-value=2.8 Score=34.42 Aligned_cols=113 Identities=9% Similarity=-0.050 Sum_probs=73.4
Q ss_pred eccCCcCHHHHHHHHHh----CCCCCeEecCCCchhhhhcCCCce-EEEEeecC--ChhH-HHHHHHHHHhhcCceEEEE
Q 031686 21 FSDVSFTISVIDDFISL----NKIPPMITYSRETTPLILNSPLKL-LWLFAAVH--DSEA-KSIFQETARAFKGKLLFVY 92 (155)
Q Consensus 21 ~y~g~~~~~~l~~fI~~----~~~P~v~e~~~~~~~~i~~~~~~~-v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~ 92 (155)
.|.|-=.-.++..||.. ...| ..+++++.+++-+...+. +.+|.... .=.. ...+.++|.++. ++.|..
T Consensus 77 ~f~g~p~g~e~~s~~~~l~~~~~~~--~~~~~~~~~~i~~~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~-~v~~~~ 153 (521)
T 1hyu_A 77 RFAGSPLGHEFTSLVLALLWTGGHP--SKEAQSLLEQIRDIDGDFEFETYYSLSCHNCPDVVQALNLMAVLNP-RIKHTA 153 (521)
T ss_dssp EEESCCCGGGHHHHHHHHHHHTTCC--CCSCHHHHHHHHHCCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT-TEEEEE
T ss_pred EEeccCcchhHHHHHHHHHhhcCCC--CCCCHHHHHHHHhcCCCcceEEEECCCCcCcHHHHHHHHHHHhHcC-ceEEEE
Confidence 44442223344444433 4445 567778888876655566 66665543 2234 667888888876 799999
Q ss_pred EeCCCcchhhhhhhhCCCCCCcceEEEEecCCCeeecCCCCCCHHHHHHHHHH
Q 031686 93 SQIYPKLKGQIFDYFGVTCYTSRVIAVASIRKRKKYVLNGELTLSNVKSFALD 145 (155)
Q Consensus 93 vd~~~~~~~~~~~~~gl~~~~~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~ 145 (155)
+|.+. ++++.+.+|+.. .|++.+ + ++.. ..|..+.+.|.+++..
T Consensus 154 vd~~~--~~~~~~~~~i~s--vPt~~i-~---g~~~-~~G~~~~~~l~~~l~~ 197 (521)
T 1hyu_A 154 IDGGT--FQNEITERNVMG--VPAVFV-N---GKEF-GQGRMTLTEIVAKVDT 197 (521)
T ss_dssp EETTT--CHHHHHHTTCCS--SSEEEE-T---TEEE-EESCCCHHHHHHHHCC
T ss_pred Eechh--hHHHHHHhCCCc--cCEEEE-C---CEEE-ecCCCCHHHHHHHHhh
Confidence 99986 688899999864 899977 3 3222 1256788888888754
No 173
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=91.25 E-value=1.8 Score=30.24 Aligned_cols=35 Identities=6% Similarity=0.043 Sum_probs=24.7
Q ss_pred eEEEEecCCCeeecCCCCCCHHHHHHHHHHHHcCC
Q 031686 116 VIAVASIRKRKKYVLNGELTLSNVKSFALDFLGDK 150 (155)
Q Consensus 116 ~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~~Gk 150 (155)
+..+++.+..-.+.+.+..+++.|.+.|+..++|.
T Consensus 151 ~~~liD~~G~i~~~~~g~~~~~~l~~~i~~lL~~~ 185 (187)
T 3dwv_A 151 TSFLIDRDGVPVERFSPGASVKDIEEKLIPLLGSA 185 (187)
T ss_dssp CEEEECTTSCEEEEECTTCCHHHHHHHHHHHC---
T ss_pred eEEEECCCCCEEEEECCCCCHHHHHHHHHHHHhcC
Confidence 88888875433455566788999999999988763
No 174
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=91.15 E-value=2.8 Score=29.26 Aligned_cols=93 Identities=6% Similarity=0.003 Sum_probs=55.4
Q ss_pred CCCceEEEEeecC--ChhH-HHHHHHHHHhhcCc-eEEEEEeCCC--------c-chhhhh-hhhCCC------------
Q 031686 57 SPLKLLWLFAAVH--DSEA-KSIFQETARAFKGK-LLFVYSQIYP--------K-LKGQIF-DYFGVT------------ 110 (155)
Q Consensus 57 ~~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~-i~F~~vd~~~--------~-~~~~~~-~~~gl~------------ 110 (155)
.++++++.|.... .-.. ...+.+++++++++ +.++.++.+. . ....++ +.++++
T Consensus 47 ~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~D~~~~ 126 (190)
T 2vup_A 47 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGE 126 (190)
T ss_dssp TTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCBSSST
T ss_pred CCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCCCCCCCHHHHHHHHHHhcCCCeEEEeecccCcc
Confidence 3456666665432 2234 67788888888765 7777776541 0 122233 333221
Q ss_pred ---------------CCCcc------eEEEEecCCCeeecCCCCCCHHHHHHHHHHHHcC
Q 031686 111 ---------------CYTSR------VIAVASIRKRKKYVLNGELTLSNVKSFALDFLGD 149 (155)
Q Consensus 111 ---------------~~~~P------~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~~G 149 (155)
....| +..+++.+..-.+.+.+..+.+.|.+.|+..++.
T Consensus 127 ~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~ 186 (190)
T 2vup_A 127 NAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEKKLIPLLES 186 (190)
T ss_dssp TBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHHHHC
T ss_pred cccHHHHHHHhhcCCcCCCccccccceEEEECCCCcEEEEECCCCCHHHHHHHHHHHHhh
Confidence 01256 7888886543345556677899999999988764
No 175
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=91.04 E-value=2.5 Score=28.46 Aligned_cols=92 Identities=8% Similarity=-0.080 Sum_probs=55.5
Q ss_pred CCceEEEEeecC--ChhH-HHHHHHHHHhhcCc-eEEEEEeCCC--------c-chhhhhh-hhCCC-------------
Q 031686 58 PLKLLWLFAAVH--DSEA-KSIFQETARAFKGK-LLFVYSQIYP--------K-LKGQIFD-YFGVT------------- 110 (155)
Q Consensus 58 ~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~-i~F~~vd~~~--------~-~~~~~~~-~~gl~------------- 110 (155)
++++++.|.... .-.. ...+.+++++++++ +.++.++.+. . ....+++ .++++
T Consensus 32 gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 111 (170)
T 2p5q_A 32 GKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEEPGTNDQITDFVCTRFKSEFPIFDKIDVNGEN 111 (170)
T ss_dssp TSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHHHHTCCCSCBBCCCBSSSTT
T ss_pred CCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCCCCCCHHHHHHHHHHhcCCCceeEeeeccCCCc
Confidence 455566665432 2234 67788888888765 7777776531 0 1222333 33321
Q ss_pred ----------------CCCcc---eEEEEecCCCeeecCCCCCCHHHHHHHHHHHHcC
Q 031686 111 ----------------CYTSR---VIAVASIRKRKKYVLNGELTLSNVKSFALDFLGD 149 (155)
Q Consensus 111 ----------------~~~~P---~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~~G 149 (155)
...+| +..+++.+..-.+.+.+..+++.|.+.|+..++.
T Consensus 112 ~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~ 169 (170)
T 2p5q_A 112 ASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVDRYYPTTSPLSLERDIKQLLEI 169 (170)
T ss_dssp BCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHTTC
T ss_pred hHHHHHHHHhcCCCccCCcccccccEEEECCCCCEEEeeCCCCCHHHHHHHHHHHhhc
Confidence 02367 8888887543345556677888999999887653
No 176
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=90.83 E-value=2.2 Score=28.00 Aligned_cols=64 Identities=11% Similarity=0.046 Sum_probs=42.4
Q ss_pred CCceEEEEeecC--ChhH-HHHHHHHHHhhc--CceEEEEEeCCCcc----------------------hhhhhhhhCCC
Q 031686 58 PLKLLWLFAAVH--DSEA-KSIFQETARAFK--GKLLFVYSQIYPKL----------------------KGQIFDYFGVT 110 (155)
Q Consensus 58 ~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~--~~i~F~~vd~~~~~----------------------~~~~~~~~gl~ 110 (155)
++++++.|...- .-.. ...+.+++++++ +++.++.++.+... ...+.+.||+.
T Consensus 28 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 107 (144)
T 1i5g_A 28 GKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLTTGFDVK 107 (144)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTCC
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHHHHcCCC
Confidence 445566665442 1234 667888889887 46777777766411 24566788886
Q ss_pred CCCcceEEEEe-cC
Q 031686 111 CYTSRVIAVAS-IR 123 (155)
Q Consensus 111 ~~~~P~v~i~~-~~ 123 (155)
.+|++++++ .+
T Consensus 108 --~~P~~~lid~~~ 119 (144)
T 1i5g_A 108 --SIPTLVGVEADS 119 (144)
T ss_dssp --SSSEEEEEETTT
T ss_pred --CCCEEEEEECCC
Confidence 489999998 54
No 177
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=90.67 E-value=2.5 Score=27.86 Aligned_cols=64 Identities=11% Similarity=0.095 Sum_probs=42.2
Q ss_pred CCceEEEEeecC--ChhH-HHHHHHHHHhhc--CceEEEEEeCCCcc----------------------hhhhhhhhCCC
Q 031686 58 PLKLLWLFAAVH--DSEA-KSIFQETARAFK--GKLLFVYSQIYPKL----------------------KGQIFDYFGVT 110 (155)
Q Consensus 58 ~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~--~~i~F~~vd~~~~~----------------------~~~~~~~~gl~ 110 (155)
++++++.|...- .-.. ...+.+++++++ +++.++.++.+... ...+.+.||+.
T Consensus 28 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 107 (146)
T 1o8x_A 28 GKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFNVE 107 (146)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTTCC
T ss_pred CCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhCCC
Confidence 445566665432 1234 667888899887 46777777766421 24567788886
Q ss_pred CCCcceEEEEe-cC
Q 031686 111 CYTSRVIAVAS-IR 123 (155)
Q Consensus 111 ~~~~P~v~i~~-~~ 123 (155)
. +|++++++ .+
T Consensus 108 ~--~Pt~~lid~~~ 119 (146)
T 1o8x_A 108 S--IPTLIGVDADS 119 (146)
T ss_dssp S--SSEEEEEETTT
T ss_pred C--CCEEEEEECCC
Confidence 4 89999999 54
No 178
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=90.54 E-value=2.5 Score=27.63 Aligned_cols=64 Identities=11% Similarity=0.087 Sum_probs=41.8
Q ss_pred CCceEEEEeecC--ChhH-HHHHHHHHHhhc--CceEEEEEeCCCcc----------------------hhhhhhhhCCC
Q 031686 58 PLKLLWLFAAVH--DSEA-KSIFQETARAFK--GKLLFVYSQIYPKL----------------------KGQIFDYFGVT 110 (155)
Q Consensus 58 ~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~--~~i~F~~vd~~~~~----------------------~~~~~~~~gl~ 110 (155)
++++++.|.... .-.. ...+.+++++++ +++.++.++.+... ...+.+.||+.
T Consensus 28 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 107 (144)
T 1o73_A 28 GKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFGVE 107 (144)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHTCC
T ss_pred CCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcCCC
Confidence 445566665432 1234 667888888887 46777777766421 23566778886
Q ss_pred CCCcceEEEEe-cC
Q 031686 111 CYTSRVIAVAS-IR 123 (155)
Q Consensus 111 ~~~~P~v~i~~-~~ 123 (155)
. +|++++++ .+
T Consensus 108 ~--~Pt~~lid~~~ 119 (144)
T 1o73_A 108 S--IPTLITINADT 119 (144)
T ss_dssp S--SSEEEEEETTT
T ss_pred C--CCEEEEEECCC
Confidence 4 89999999 44
No 179
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=90.32 E-value=1.8 Score=28.48 Aligned_cols=83 Identities=11% Similarity=0.029 Sum_probs=49.2
Q ss_pred CCceEEEEeecC--ChhH-HHHHHHHHHhhcC-ceEEEEEeCCCcc--h----------------------hhhhhhhCC
Q 031686 58 PLKLLWLFAAVH--DSEA-KSIFQETARAFKG-KLLFVYSQIYPKL--K----------------------GQIFDYFGV 109 (155)
Q Consensus 58 ~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~-~i~F~~vd~~~~~--~----------------------~~~~~~~gl 109 (155)
++++++.|...- .-.. ...+.++++++++ .+.++.++.+... . ..+.+.||+
T Consensus 32 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v 111 (143)
T 4fo5_A 32 GRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKKYDL 111 (143)
T ss_dssp CCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHHTTG
T ss_pred CCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHHHHcCC
Confidence 345565665442 1234 6678888888874 4777777665311 1 234455666
Q ss_pred CCCCcceEEEEecCCCeeecCCCCCCHHHHHHHHHH
Q 031686 110 TCYTSRVIAVASIRKRKKYVLNGELTLSNVKSFALD 145 (155)
Q Consensus 110 ~~~~~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~ 145 (155)
. ..|+..+++.+..-.+. ..+.+++++++++
T Consensus 112 ~--~~P~~~lid~~G~i~~~---~~~~~~l~~~l~~ 142 (143)
T 4fo5_A 112 R--KGFKNFLINDEGVIIAA---NVTPEKLTEILKA 142 (143)
T ss_dssp G--GCCCEEEECTTSBEEEE---SCCHHHHHHHHTC
T ss_pred C--CCCcEEEECCCCEEEEc---cCCHHHHHHHHHh
Confidence 5 37988888865322333 2567888887753
No 180
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=89.96 E-value=2.8 Score=27.42 Aligned_cols=82 Identities=10% Similarity=0.004 Sum_probs=47.7
Q ss_pred CCceEEEEeecC-C-hhH-HHHHHH---HHHhhcC-ceEEEEEeCCCcc--hhh--------------------hhhhhC
Q 031686 58 PLKLLWLFAAVH-D-SEA-KSIFQE---TARAFKG-KLLFVYSQIYPKL--KGQ--------------------IFDYFG 108 (155)
Q Consensus 58 ~~~~v~lf~~~~-~-~~~-~~~~~~---vA~~~~~-~i~F~~vd~~~~~--~~~--------------------~~~~~g 108 (155)
++++++.|.... . -.. ...+.+ +++++++ .+.++.++.+... ..+ +.+.||
T Consensus 31 gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 110 (142)
T 3eur_A 31 AEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELDEWKKHRNDFAKEWTNGYDKELVIKNKNLYD 110 (142)
T ss_dssp CSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHHHHHHGGGSCTTSEEEECTTCHHHHTTCSC
T ss_pred CCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHHHHHHHHhcccccccccCccchhhhhhhcC
Confidence 345566665432 1 133 556777 7777754 5777777776421 111 244555
Q ss_pred CCCCCcceEEEEecCCCeeecCCCCCCHHHHHHHHH
Q 031686 109 VTCYTSRVIAVASIRKRKKYVLNGELTLSNVKSFAL 144 (155)
Q Consensus 109 l~~~~~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~ 144 (155)
+. .+|++.+++.+..-.+. ..+.+.|++|++
T Consensus 111 v~--~~P~~~lid~~G~i~~~---~~~~~~l~~~l~ 141 (142)
T 3eur_A 111 LR--AIPTLYLLDKNKTVLLK---DATLQKVEQYLA 141 (142)
T ss_dssp CT--TCSEEEEECTTCBEEEE---EECHHHHHHHHH
T ss_pred CC--cCCeEEEECCCCcEEec---CCCHHHHHHHHh
Confidence 54 47999999864322332 246888998885
No 181
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=89.81 E-value=1.3 Score=30.05 Aligned_cols=88 Identities=11% Similarity=0.131 Sum_probs=52.7
Q ss_pred CCceEEEEeecC--C-hhH-HHHHHHHHHhhcC----ceEEEEEeCCCc-c----h---------------------hhh
Q 031686 58 PLKLLWLFAAVH--D-SEA-KSIFQETARAFKG----KLLFVYSQIYPK-L----K---------------------GQI 103 (155)
Q Consensus 58 ~~~~v~lf~~~~--~-~~~-~~~~~~vA~~~~~----~i~F~~vd~~~~-~----~---------------------~~~ 103 (155)
++++++.|.... . -.. ...+.++++++++ ++.++.++.+.. + . ..+
T Consensus 35 gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d~~~~~~~~ 114 (172)
T 2k6v_A 35 DKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSGSPEAVREA 114 (172)
T ss_dssp TSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECCCHHHHHHH
T ss_pred CCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeCCHHHHHHH
Confidence 445566665442 2 244 6778888888773 577777776521 0 0 234
Q ss_pred hhhhCCCC-------------CCcceEEEEecCCCeeecCCCCC--CHHHHHHHHHHH
Q 031686 104 FDYFGVTC-------------YTSRVIAVASIRKRKKYVLNGEL--TLSNVKSFALDF 146 (155)
Q Consensus 104 ~~~~gl~~-------------~~~P~v~i~~~~~~~kY~~~~~~--t~~~I~~Fi~~f 146 (155)
.+.||+.. ...|++.+++ +..-.+.+.+.. +.+.|.+.|+..
T Consensus 115 ~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid-~G~i~~~~~g~~~~~~~~l~~~l~~l 171 (172)
T 2k6v_A 115 AQTFGVFYQKSQYRGPGEYLVDHTATTFVVK-EGRLVLLYSPDKAEATDRVVADLQAL 171 (172)
T ss_dssp HHHHTCCEEEEEEEETTEEEEEECCCEEEEE-TTEEEEEECHHHHTCHHHHHHHHHHC
T ss_pred HHhcCeEEEeccCCCCCCceEecCCEEEEEE-CCEEEEEECCCCCCCHHHHHHHHHHh
Confidence 45566421 2369999999 533344444444 888898888764
No 182
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=89.42 E-value=0.4 Score=31.90 Aligned_cols=58 Identities=12% Similarity=-0.056 Sum_probs=40.5
Q ss_pred eEEEEEeCCCcchhhhhhhhCCCCCCcceEEEEecCCCeeecCCCCCCHHHHHHHHHHHHc
Q 031686 88 LLFVYSQIYPKLKGQIFDYFGVTCYTSRVIAVASIRKRKKYVLNGELTLSNVKSFALDFLG 148 (155)
Q Consensus 88 i~F~~vd~~~~~~~~~~~~~gl~~~~~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~~ 148 (155)
+.++.+|.+......+...+++. ..|++++++ +..+...+.|-..++.+.++++..+.
T Consensus 53 ~~l~~vdv~~~~~~~la~~~~V~--g~PT~i~f~-~G~ev~Ri~G~~~~~~f~~~L~~~l~ 110 (116)
T 3dml_A 53 APVQRLQMRDPLPPGLELARPVT--FTPTFVLMA-GDVESGRLEGYPGEDFFWPMLARLIG 110 (116)
T ss_dssp SCEEEEETTSCCCTTCBCSSCCC--SSSEEEEEE-TTEEEEEEECCCCHHHHHHHHHHHHH
T ss_pred ceEEEEECCCCCchhHHHHCCCC--CCCEEEEEE-CCEEEeeecCCCCHHHHHHHHHHHHh
Confidence 66777777752233555666775 489999998 33344556677899999999988764
No 183
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=88.71 E-value=1.4 Score=30.95 Aligned_cols=96 Identities=8% Similarity=0.022 Sum_probs=54.8
Q ss_pred CCceEEEEe-ecC--ChhH-HHHHHHHHHhhcC-ceEEEEEeCCCcc--------------------------hhhhhhh
Q 031686 58 PLKLLWLFA-AVH--DSEA-KSIFQETARAFKG-KLLFVYSQIYPKL--------------------------KGQIFDY 106 (155)
Q Consensus 58 ~~~~v~lf~-~~~--~~~~-~~~~~~vA~~~~~-~i~F~~vd~~~~~--------------------------~~~~~~~ 106 (155)
++++++.|. ... .-.. ...+.++++++++ .+.++.++.+... ...+.+.
T Consensus 33 gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 112 (198)
T 1zof_A 33 KNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSISRD 112 (198)
T ss_dssp SSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHHHHH
T ss_pred CCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEECCchHHHHH
Confidence 345566666 221 1123 5567777777754 3666666655310 1345566
Q ss_pred hCCCCC---CcceEEEEecCCCeeecCCC----CCCHHHHHHHHHHHH----cCCCcc
Q 031686 107 FGVTCY---TSRVIAVASIRKRKKYVLNG----ELTLSNVKSFALDFL----GDKLRN 153 (155)
Q Consensus 107 ~gl~~~---~~P~v~i~~~~~~~kY~~~~----~~t~~~I~~Fi~~f~----~Gkl~p 153 (155)
||+... ..|+..+++.+..-.+...+ ..+.+.|.+.|+... .|...|
T Consensus 113 ~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~~~~~~~~~p 170 (198)
T 1zof_A 113 YDVLFEEAIALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDALLHFEEHGEVCP 170 (198)
T ss_dssp TTCEETTTEECEEEEEEETTTEEEEEEEESSSCCCHHHHHHHHHHHHHHHHSSCCCCC
T ss_pred hCCcccCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHHHhhccCCccC
Confidence 776511 47999999975322333322 236788999998887 455444
No 184
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=88.60 E-value=0.77 Score=29.99 Aligned_cols=72 Identities=8% Similarity=0.058 Sum_probs=48.0
Q ss_pred EEEEeecC-C-hhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCcceEEEEecCCCeeecCCCCCCHHH
Q 031686 62 LWLFAAVH-D-SEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTSRVIAVASIRKRKKYVLNGELTLSN 138 (155)
Q Consensus 62 v~lf~~~~-~-~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~P~v~i~~~~~~~kY~~~~~~t~~~ 138 (155)
+++|.... . =.. ...+.++|.++. +.|..+|.+. ...+.+.+|+. +|++++.. +|+. ...+.++++.
T Consensus 32 vv~y~~~~C~~C~~a~~~L~~l~~e~~--i~~~~vDId~--d~~l~~~ygv~---VP~l~~~~--dG~~-v~~g~~~~~~ 101 (107)
T 2fgx_A 32 LVVYGREGCHLCEEMIASLRVLQKKSW--FELEVINIDG--NEHLTRLYNDR---VPVLFAVN--EDKE-LCHYFLDSDV 101 (107)
T ss_dssp EEEEECSSCHHHHHHHHHHHHHHHHSC--CCCEEEETTT--CHHHHHHSTTS---CSEEEETT--TTEE-EECSSCCCHH
T ss_pred EEEEeCCCChhHHHHHHHHHHHHHhcC--CeEEEEECCC--CHHHHHHhCCC---CceEEEEE--CCEE-EEecCCCHHH
Confidence 55665443 1 134 667778887764 8888999985 45677888873 89886543 2332 2235688899
Q ss_pred HHHHH
Q 031686 139 VKSFA 143 (155)
Q Consensus 139 I~~Fi 143 (155)
|++|+
T Consensus 102 L~~~L 106 (107)
T 2fgx_A 102 IGAYL 106 (107)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99887
No 185
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=88.54 E-value=2.4 Score=29.46 Aligned_cols=91 Identities=10% Similarity=-0.117 Sum_probs=54.3
Q ss_pred CCceEEEEe-ecC--ChhH-HHHHHHHHHhhcC-ceEEEEEeCCCcc-----------------------hhhhhhhhCC
Q 031686 58 PLKLLWLFA-AVH--DSEA-KSIFQETARAFKG-KLLFVYSQIYPKL-----------------------KGQIFDYFGV 109 (155)
Q Consensus 58 ~~~~v~lf~-~~~--~~~~-~~~~~~vA~~~~~-~i~F~~vd~~~~~-----------------------~~~~~~~~gl 109 (155)
++++++.|. ... .-.. ...+.++++++++ .+.++.++.+... ...+.+.||+
T Consensus 31 gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 110 (187)
T 1we0_A 31 GKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQTISRQFDV 110 (187)
T ss_dssp SSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTCHHHHHTTC
T ss_pred CCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCchHHHHHhCC
Confidence 445566666 321 1233 6677777777764 4677776665310 2345567777
Q ss_pred CCC----CcceEEEEecCCCeeecCCC----CCCHHHHHHHHHHHHc
Q 031686 110 TCY----TSRVIAVASIRKRKKYVLNG----ELTLSNVKSFALDFLG 148 (155)
Q Consensus 110 ~~~----~~P~v~i~~~~~~~kY~~~~----~~t~~~I~~Fi~~f~~ 148 (155)
... ..|++.+++.+..-.+...+ +-+.+.|.+.|+.+..
T Consensus 111 ~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~ 157 (187)
T 1we0_A 111 LNEETGLADRGTFIIDPDGVIQAIEINADGIGRDASTLINKVKAAQY 157 (187)
T ss_dssp EETTTTEECEEEEEECTTSBEEEEEEECTTSCCCTTHHHHHHHHHHH
T ss_pred CcCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHhh
Confidence 511 47999999875332333222 2367888888888775
No 186
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=87.76 E-value=2.4 Score=26.23 Aligned_cols=50 Identities=8% Similarity=0.067 Sum_probs=34.9
Q ss_pred EEEEeCCCcchhhhhhhhCCCCCCcceEEEEecCCCeeecCCCCCCHHHHHHHHHHHHcC
Q 031686 90 FVYSQIYPKLKGQIFDYFGVTCYTSRVIAVASIRKRKKYVLNGELTLSNVKSFALDFLGD 149 (155)
Q Consensus 90 F~~vd~~~~~~~~~~~~~gl~~~~~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~~G 149 (155)
|..+|.+. .+.+.+.+|+. +|++.+ . +|+.. .+.++++.|+++++.++..
T Consensus 29 ~~~vdid~--~~~l~~~~g~~---vPtl~~--~-~G~~v--~g~~~~~~L~~~l~~~~~~ 78 (87)
T 1ttz_A 29 FFSVFIDD--DAALESAYGLR---VPVLRD--P-MGREL--DWPFDAPRLRAWLDAAPHA 78 (87)
T ss_dssp EEEEECTT--CHHHHHHHTTT---CSEEEC--T-TCCEE--ESCCCHHHHHHHHHTCC--
T ss_pred eEEEECCC--CHHHHHHhCCC---cCeEEE--E-CCEEE--eCCCCHHHHHHHHHHHHHH
Confidence 67788885 46788888873 898876 2 23322 1568899999999876654
No 187
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=87.57 E-value=1.2 Score=31.27 Aligned_cols=88 Identities=7% Similarity=-0.050 Sum_probs=49.2
Q ss_pred ceEEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCC-CCCcceEEEEecCCCe--eecCCCC
Q 031686 60 KLLWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVT-CYTSRVIAVASIRKRK--KYVLNGE 133 (155)
Q Consensus 60 ~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~-~~~~P~v~i~~~~~~~--kY~~~~~ 133 (155)
+.++.|...- +-.. ...+.++|+++. ++.|+.++.+. ...+++.|+-. ...+|++++++..... .+.....
T Consensus 56 ~vvv~F~A~WC~pC~~~~P~l~~l~~~~~-~v~~~~v~~d~--~~~~~~~~~~~~v~~iPt~i~~~~~G~~~~~~g~~p~ 132 (167)
T 1z6n_A 56 YRLLVAGEMWCPDCQINLAALDFAQRLQP-NIELAIISKGR--AEDDLRQRLALERIAIPLVLVLDEEFNLLGRFVERPQ 132 (167)
T ss_dssp EEEEEECCTTCHHHHHHHHHHHHHHHHCT-TEEEEEECHHH--HHHHTTTTTTCSSCCSSEEEEECTTCCEEEEEESSCH
T ss_pred EEEEEEECCCChhHHHHHHHHHHHHHHCC-CcEEEEEECCC--CHHHHHHHHHcCCCCcCeEEEECCCCCEEEEEcCCCH
Confidence 3355554331 2234 667888888875 68899998875 45666666511 1358999999853221 2211011
Q ss_pred CCHHHHHHHHHHHHcCC
Q 031686 134 LTLSNVKSFALDFLGDK 150 (155)
Q Consensus 134 ~t~~~I~~Fi~~f~~Gk 150 (155)
-..+.+.++...|.+|.
T Consensus 133 ~~~~~i~~~~~~~~~~~ 149 (167)
T 1z6n_A 133 AVLDGGPQALAAYKAGD 149 (167)
T ss_dssp HHHHHCHHHHHHHHTTT
T ss_pred HHHHhHHHHHHHHHccc
Confidence 11234445566666664
No 188
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=87.32 E-value=5 Score=26.98 Aligned_cols=87 Identities=11% Similarity=0.112 Sum_probs=49.2
Q ss_pred eEEEEe-ecC-C-hhH-HHHHHHHHHhhcCc-eEEEEEeCCCc-------------------chhhhhhhhCCCC--CCc
Q 031686 61 LLWLFA-AVH-D-SEA-KSIFQETARAFKGK-LLFVYSQIYPK-------------------LKGQIFDYFGVTC--YTS 114 (155)
Q Consensus 61 ~v~lf~-~~~-~-~~~-~~~~~~vA~~~~~~-i~F~~vd~~~~-------------------~~~~~~~~~gl~~--~~~ 114 (155)
+++.|. ... . -.. ...+.+++++++++ +.++.++.+.. ....+.+.||+.+ ...
T Consensus 32 vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~~~ 111 (161)
T 3drn_A 32 IVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDDINSHKRFKEKYKLPFILVSDPDKKIRELYGAKGFILPA 111 (161)
T ss_dssp EEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCCCSSSCC
T ss_pred EEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHcCCCCcCccc
Confidence 566665 222 1 233 66777788888754 66766666521 1235667788763 237
Q ss_pred ceEEEEecCCCeeecCCC----CCCHHHHHHHHHHHH
Q 031686 115 RVIAVASIRKRKKYVLNG----ELTLSNVKSFALDFL 147 (155)
Q Consensus 115 P~v~i~~~~~~~kY~~~~----~~t~~~I~~Fi~~f~ 147 (155)
|+..+++.+..-.+...+ +-..+.+.+.++...
T Consensus 112 P~~~lid~~G~i~~~~~g~~~~~~~~~~il~~l~~l~ 148 (161)
T 3drn_A 112 RITFVIDKKGIIRHIYNSQMNPANHVNEALKALKQIK 148 (161)
T ss_dssp CEEEEECTTSBEEEEEECSSCTTHHHHHHHHHHHHHH
T ss_pred ceEEEECCCCEEEEEEecCCCCCcCHHHHHHHHHHhh
Confidence 999999975333333333 223445666665554
No 189
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=87.24 E-value=5.2 Score=27.13 Aligned_cols=33 Identities=6% Similarity=-0.080 Sum_probs=24.6
Q ss_pred eEEEEecCCCeeecCCCCCCHHHHHHHHHHHHc
Q 031686 116 VIAVASIRKRKKYVLNGELTLSNVKSFALDFLG 148 (155)
Q Consensus 116 ~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~~ 148 (155)
+..+++.+..-.+.+.+..+.+.|.+.|+..++
T Consensus 136 ~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 168 (171)
T 3cmi_A 136 EKFLVDKKGKVYERYSSLTKPSSLSETIEELLK 168 (171)
T ss_dssp CEEEECSSSCEEEEECTTSCGGGGHHHHHHHHT
T ss_pred eEEEECCCCCEEEEeCCCCCHHHHHHHHHHHHH
Confidence 888888754334555667788999999988875
No 190
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=85.88 E-value=2.5 Score=29.23 Aligned_cols=32 Identities=0% Similarity=-0.347 Sum_probs=21.8
Q ss_pred cceEEEEecCCCeeecCCCCCCHHHHHHHHHH
Q 031686 114 SRVIAVASIRKRKKYVLNGELTLSNVKSFALD 145 (155)
Q Consensus 114 ~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~ 145 (155)
.|+..+++.+..-.+.+.+..+++.|.+.|+.
T Consensus 150 ~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ 181 (183)
T 2obi_A 150 NFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPH 181 (183)
T ss_dssp TTCEEEECTTSCEEEEECTTSCTHHHHTTSGG
T ss_pred cceEEEECCCCCEEEEeCCCCCHHHHHHHHHH
Confidence 48888998754334555666778888776654
No 191
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=85.68 E-value=6.2 Score=26.53 Aligned_cols=38 Identities=11% Similarity=-0.080 Sum_probs=25.1
Q ss_pred CcceEEEEecCCCeeecCCCC--CCHHHHHHHHHHHHcCC
Q 031686 113 TSRVIAVASIRKRKKYVLNGE--LTLSNVKSFALDFLGDK 150 (155)
Q Consensus 113 ~~P~v~i~~~~~~~kY~~~~~--~t~~~I~~Fi~~f~~Gk 150 (155)
..|+..+++.+..-.+.+.+. .+.+.|.+.|+..++.|
T Consensus 135 ~~p~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll~~k 174 (174)
T 1xzo_A 135 HQSSFYLVGPDGKVLKDYNGVENTPYDDIISDVKSASTLK 174 (174)
T ss_dssp SCCEEEEECTTSEEEEEEESSSSCCHHHHHHHHHHHTCCC
T ss_pred eeeEEEEECCCCeEEEEEcCCCCCCHHHHHHHHHHHHhcC
Confidence 368888888653323333332 35889999999887654
No 192
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=85.69 E-value=0.16 Score=34.45 Aligned_cols=50 Identities=6% Similarity=-0.083 Sum_probs=31.0
Q ss_pred hhhhhCCCCCCcceEEEEecCCCeeecCCCCCCHHHHHHHHHHHHcCCCcc
Q 031686 103 IFDYFGVTCYTSRVIAVASIRKRKKYVLNGELTLSNVKSFALDFLGDKLRN 153 (155)
Q Consensus 103 ~~~~~gl~~~~~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~~Gkl~p 153 (155)
+.+.||+....+|++++++.+....+...+ .+++++.++++.+.++.-++
T Consensus 104 ~~~~~~~~~~~~P~~~lid~~G~i~~~~~g-~~~~~l~~~l~~l~~~~~~~ 153 (159)
T 2ls5_A 104 IFAKYALRDAGITRNVLIDREGKIVKLTRL-YNEEEFASLVQQINEMLKEG 153 (159)
Confidence 344455433348999988864322333333 56778999998887765544
No 193
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=85.31 E-value=3.6 Score=28.40 Aligned_cols=90 Identities=10% Similarity=-0.010 Sum_probs=52.8
Q ss_pred CCceEEEEeecC--ChhH-HHHHHHHHHhhcCc-eEEEEEeCCC---------cchhhhhhh-hCCC----------C--
Q 031686 58 PLKLLWLFAAVH--DSEA-KSIFQETARAFKGK-LLFVYSQIYP---------KLKGQIFDY-FGVT----------C-- 111 (155)
Q Consensus 58 ~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~-i~F~~vd~~~---------~~~~~~~~~-~gl~----------~-- 111 (155)
++++++.|.... .-.. ...|.+++++++++ +.++.++.+. ....++++. +|++ +
T Consensus 49 Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~g~~ 128 (181)
T 2p31_A 49 GSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDSNKEIESFARRTYSVSFPMFSKIAVTGTG 128 (181)
T ss_dssp TSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSSTT
T ss_pred CCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcCCCCCCCCCHHHHHHHHHhhcCCCceeEeecccCCcc
Confidence 445566665432 2233 66788899998765 7777776542 012233343 4422 0
Q ss_pred ---------CCcc-------eEEEEecCCCeeecCCCCCCHHHHHHHHHHHH
Q 031686 112 ---------YTSR-------VIAVASIRKRKKYVLNGELTLSNVKSFALDFL 147 (155)
Q Consensus 112 ---------~~~P-------~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~ 147 (155)
...| +..+++.+..-.+.+.+..+++.|.+.|+..+
T Consensus 129 ~~~~~~~~~~~~P~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 180 (181)
T 2p31_A 129 AHPAFKYLAQTSGKEPTWNFWKYLVAPDGKVVGAWDPTVSVEEVRPQITALV 180 (181)
T ss_dssp SCHHHHHHHHHHSCCCCSTTCEEEECTTSCEEEEECTTSCHHHHHHHHHTTC
T ss_pred chhhhhhhhhcCCCccccceeEEEEcCCCCEEEEeCCCCCHHHHHHHHHHHh
Confidence 1246 77788865433445556778899998887654
No 194
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=84.54 E-value=1.8 Score=30.67 Aligned_cols=72 Identities=8% Similarity=0.016 Sum_probs=44.7
Q ss_pred CCchhhhhcCCCceEEEEeecC-Ch-hH--HHHH--HHHHHhhcCceEEEEEeCCCcchhhhhhhh--------CCCCCC
Q 031686 48 RETTPLILNSPLKLLWLFAAVH-DS-EA--KSIF--QETARAFKGKLLFVYSQIYPKLKGQIFDYF--------GVTCYT 113 (155)
Q Consensus 48 ~~~~~~i~~~~~~~v~lf~~~~-~~-~~--~~~~--~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~--------gl~~~~ 113 (155)
.+.+......++|+++-|.-.- .. .. .+.| .++|+.+.++++++.+|.+. ...+.+.+ |+.+
T Consensus 29 ~ea~~~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~fv~ikVD~de--~~~l~~~y~~~~q~~~gv~g-- 104 (173)
T 3ira_A 29 EEAFEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEAFVSIKVDREE--RPDIDNIYMTVCQIILGRGG-- 104 (173)
T ss_dssp HHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHHCEEEEEETTT--CHHHHHHHHHHHHHHHSCCC--
T ss_pred HHHHHHHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHhcCceeeeCCcc--cCcHHHHHHHHHHHHcCCCC--
Confidence 4556666666777766665331 10 11 2222 35666666679999999985 34554444 7754
Q ss_pred cceEEEEecC
Q 031686 114 SRVIAVASIR 123 (155)
Q Consensus 114 ~P~v~i~~~~ 123 (155)
.|++++++.+
T Consensus 105 ~Pt~v~l~~d 114 (173)
T 3ira_A 105 WPLNIIMTPG 114 (173)
T ss_dssp SSEEEEECTT
T ss_pred CcceeeECCC
Confidence 8999999865
No 195
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=83.82 E-value=3.5 Score=28.28 Aligned_cols=56 Identities=5% Similarity=-0.110 Sum_probs=31.4
Q ss_pred ceEEEEEeCCCcchhhhhhhhCCCCCCcceEEEEecCCCeeecCCCC-------CCHHHHHHHHHHHH
Q 031686 87 KLLFVYSQIYPKLKGQIFDYFGVTCYTSRVIAVASIRKRKKYVLNGE-------LTLSNVKSFALDFL 147 (155)
Q Consensus 87 ~i~F~~vd~~~~~~~~~~~~~gl~~~~~P~v~i~~~~~~~kY~~~~~-------~t~~~I~~Fi~~f~ 147 (155)
.++.+-+|.+. ......+++. .+|++++++.++...+...|. .+++++.++++...
T Consensus 79 ~fv~V~vD~e~---~~~~~~~~v~--~~PT~~f~~~~G~~v~~~~G~~~~~~~~~~~~~~~~ll~~~~ 141 (151)
T 3ph9_A 79 KFIMLNLMHET---TDKNLSPDGQ--YVPRIMFVDPSLTVRADIAGRYSNRLYTYEPRDLPLLIENMK 141 (151)
T ss_dssp TCEEEEESSCC---SCGGGCTTCC--CSSEEEEECTTSCBCTTCCCSCTTSTTCCCGGGHHHHHHHHH
T ss_pred CeEEEEecCCc---hhhHhhcCCC--CCCEEEEECCCCCEEEEEeCCcCCcccccchhhHHHHHHHHH
Confidence 45555555332 2344555654 489999998643334444342 55666666666554
No 196
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=83.63 E-value=2.6 Score=26.87 Aligned_cols=71 Identities=14% Similarity=0.142 Sum_probs=43.7
Q ss_pred EEEEeecC--ChhH-HHHHHHHHHhhcCceEEEEEeCCCc--chhhhhhhhCCCCCCcceEEEEecCCCeeecCCCCCCH
Q 031686 62 LWLFAAVH--DSEA-KSIFQETARAFKGKLLFVYSQIYPK--LKGQIFDYFGVTCYTSRVIAVASIRKRKKYVLNGELTL 136 (155)
Q Consensus 62 v~lf~~~~--~~~~-~~~~~~vA~~~~~~i~F~~vd~~~~--~~~~~~~~~gl~~~~~P~v~i~~~~~~~kY~~~~~~t~ 136 (155)
++.|...- .-.. ...|.++|+++. ++-++.+.. ....+.+.||+.. +|++++ + |+.| .|..+.
T Consensus 16 vV~F~A~WC~~C~~~~p~~~~~a~~~~----~v~~~~~~~~~~~~~l~~~~~V~~--~PT~~i-~---G~~~--~G~~~~ 83 (106)
T 3kp8_A 16 GTMYGAYWCPHCQDQKELFGAAFDQVP----YVECSPNGPGTPQAQECTEAGITS--YPTWII-N---GRTY--TGVRSL 83 (106)
T ss_dssp CEEEECTTCHHHHHHHHHHGGGGGGSC----EEESCTTCTTSCCCHHHHHTTCCS--SSEEEE-T---TEEE--ESCCCH
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHhCC----EEEEecccccchhHHHHHHcCCeE--eCEEEE-C---CEEe--cCCCCH
Confidence 55555432 1233 556666666553 444443321 2567889999974 899887 3 4443 577889
Q ss_pred HHHHHHHH
Q 031686 137 SNVKSFAL 144 (155)
Q Consensus 137 ~~I~~Fi~ 144 (155)
+.|.+|+.
T Consensus 84 ~~l~~~~~ 91 (106)
T 3kp8_A 84 EALAVASG 91 (106)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHhC
Confidence 99998863
No 197
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=81.88 E-value=0.36 Score=34.82 Aligned_cols=41 Identities=20% Similarity=0.241 Sum_probs=29.1
Q ss_pred hhhhhhhCCCCCCcceEEEEecCCCeeecCC-CCCCHHHHHHHHHHHHc
Q 031686 101 GQIFDYFGVTCYTSRVIAVASIRKRKKYVLN-GELTLSNVKSFALDFLG 148 (155)
Q Consensus 101 ~~~~~~~gl~~~~~P~v~i~~~~~~~kY~~~-~~~t~~~I~~Fi~~f~~ 148 (155)
.+.++.+|+++ .|+++| + + +|.++ ++++.+++.+|+++|++
T Consensus 40 ~~~a~~~gi~g--vP~fvi-n---g-k~~~~~~~~~~~~~~~f~~~~~~ 81 (197)
T 1un2_A 40 EKAAADVQLRG--VPAMFV-N---G-KYQLNPQGMDTSNMDVFVQQYAD 81 (197)
T ss_dssp HHHHHHTTCCS--SSEEEE-T---T-TEEECGGGSCCSSHHHHHHHHHH
T ss_pred HHHHHHcCCCc--CCEEEE-c---c-eEecCccccccccHHHHHHHHHH
Confidence 45578889986 899976 2 3 66555 45777778888887765
No 198
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=80.60 E-value=11 Score=25.70 Aligned_cols=38 Identities=11% Similarity=-0.059 Sum_probs=23.5
Q ss_pred CCceEEEEeecC--ChhH-HHHHHHHHHhhcCc-eEEEEEeC
Q 031686 58 PLKLLWLFAAVH--DSEA-KSIFQETARAFKGK-LLFVYSQI 95 (155)
Q Consensus 58 ~~~~v~lf~~~~--~~~~-~~~~~~vA~~~~~~-i~F~~vd~ 95 (155)
++++++.|...- .-.. ...+.+++++++++ +.++.+..
T Consensus 38 Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~ 79 (180)
T 3kij_A 38 GKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPC 79 (180)
T ss_dssp TSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEEC
T ss_pred CCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEEC
Confidence 445555555432 2234 66788899998875 77776653
No 199
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=80.41 E-value=7.6 Score=26.78 Aligned_cols=33 Identities=0% Similarity=-0.285 Sum_probs=21.6
Q ss_pred cceEEEEecCCCeeecCCCCCCHHHHHHHHHHH
Q 031686 114 SRVIAVASIRKRKKYVLNGELTLSNVKSFALDF 146 (155)
Q Consensus 114 ~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f 146 (155)
.|+..+++.+..-.+.+.+..+++.|.+.|+..
T Consensus 152 ~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~l 184 (185)
T 2gs3_A 152 NFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPHY 184 (185)
T ss_dssp SCCEEEECTTSCEEEEECTTSCGGGGGGGHHHH
T ss_pred cceEEEECCCCCEEEeeCCCCCHHHHHHHHHHh
Confidence 378888886543345455666777777777654
No 200
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=77.69 E-value=13 Score=24.60 Aligned_cols=87 Identities=9% Similarity=0.047 Sum_probs=48.3
Q ss_pred ceEEEEe-ecC-C-hhH-HHHHHHHHHhhcC-ceEEEEEeCCCcc---------------------hhhhhhhhCCCC--
Q 031686 60 KLLWLFA-AVH-D-SEA-KSIFQETARAFKG-KLLFVYSQIYPKL---------------------KGQIFDYFGVTC-- 111 (155)
Q Consensus 60 ~~v~lf~-~~~-~-~~~-~~~~~~vA~~~~~-~i~F~~vd~~~~~---------------------~~~~~~~~gl~~-- 111 (155)
++++.|. ... . -.. ...+.++++++++ .+.++.++.+... ...+.+.||+..
T Consensus 38 ~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~~~ 117 (160)
T 1xvw_A 38 NVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPHGAVSQAYGVFNEQ 117 (160)
T ss_dssp EEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTTTHHHHHTTCEETT
T ss_pred CEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcChHHHHHcCCcccc
Confidence 5566665 332 1 233 5677777788764 4777766655310 235667788751
Q ss_pred CCcc--eEEEEecCCCeeecCCCC----CCHHHHHHHHHHH
Q 031686 112 YTSR--VIAVASIRKRKKYVLNGE----LTLSNVKSFALDF 146 (155)
Q Consensus 112 ~~~P--~v~i~~~~~~~kY~~~~~----~t~~~I~~Fi~~f 146 (155)
..+| +..+++.+..-.+...+. -..+.+.+.++.+
T Consensus 118 ~~~p~~~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l 158 (160)
T 1xvw_A 118 AGIANRGTFVVDRSGIIRFAEMKQPGEVRDQRLWTDALAAL 158 (160)
T ss_dssp TTEECSEEEEECTTSBEEEEEECCTTCCCCHHHHHHHHHHT
T ss_pred CCCeeeeEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 1467 888888753323333332 2455666666543
No 201
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=75.53 E-value=6.6 Score=24.55 Aligned_cols=55 Identities=7% Similarity=0.090 Sum_probs=36.4
Q ss_pred CceEEEEEeCCCcchhhhhhhhCCCCCCcceEEEEecCCCeeecCCCCCCHHHHHHHHHHHHc
Q 031686 86 GKLLFVYSQIYPKLKGQIFDYFGVTCYTSRVIAVASIRKRKKYVLNGELTLSNVKSFALDFLG 148 (155)
Q Consensus 86 ~~i~F~~vd~~~~~~~~~~~~~gl~~~~~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~~ 148 (155)
.++.|..+|.+......+.+.+| . .+|++. .+ ++.. .-+.++.+.|+++++.++.
T Consensus 42 ~~i~~~~vdi~~~~~~el~~~~g-~--~vP~l~-~~---g~~~-~~~g~~~~~l~~~l~~~~~ 96 (100)
T 1wjk_A 42 DRFILQEVDITLPENSTWYERYK-F--DIPVFH-LN---GQFL-MMHRVNTSKLEKQLRKLSG 96 (100)
T ss_dssp SSSEEEEEETTSSTTHHHHHHSS-S--SCSEEE-ES---SSEE-EESSCCHHHHHHHHHSSSC
T ss_pred hCCeEEEEECCCcchHHHHHHHC-C--CCCEEE-EC---CEEE-EecCCCHHHHHHHHHHHHh
Confidence 34889999988322567778888 4 489774 33 3221 1234789999999987653
No 202
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=74.75 E-value=19 Score=25.13 Aligned_cols=90 Identities=10% Similarity=0.107 Sum_probs=52.7
Q ss_pred CCceEEEEeecC--C-hhH-HHHHHHHHHhhcC-ceEEEEEeCCCcc--------------------------hhhhhhh
Q 031686 58 PLKLLWLFAAVH--D-SEA-KSIFQETARAFKG-KLLFVYSQIYPKL--------------------------KGQIFDY 106 (155)
Q Consensus 58 ~~~~v~lf~~~~--~-~~~-~~~~~~vA~~~~~-~i~F~~vd~~~~~--------------------------~~~~~~~ 106 (155)
++++++.|.... . -.. ...|.++++++++ .+.++.++.+... ...+.+.
T Consensus 36 gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ 115 (202)
T 1uul_A 36 GKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCIMKS 115 (202)
T ss_dssp TSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHHHHH
T ss_pred CCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEECCchHHHHH
Confidence 345566666232 1 133 5667777888865 4777776665310 1245566
Q ss_pred hCCCCC----CcceEEEEecCCCeeecC----CCCCCHHHHHHHHHHHH
Q 031686 107 FGVTCY----TSRVIAVASIRKRKKYVL----NGELTLSNVKSFALDFL 147 (155)
Q Consensus 107 ~gl~~~----~~P~v~i~~~~~~~kY~~----~~~~t~~~I~~Fi~~f~ 147 (155)
||+... ..|+..+++.+..-.+.. +..-+.+.|.+.++.+.
T Consensus 116 ygv~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~ell~~l~~l~ 164 (202)
T 1uul_A 116 YGVLKEEDGVAYRGLFIIDPKQNLRQITVNDLPVGRDVDEALRLVKAFQ 164 (202)
T ss_dssp HTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred cCCccCCCCceeeEEEEECCCCEEEEEEeCCCCCCCCHHHHHHHHHHhh
Confidence 776411 479999998753323332 11346788888888876
No 203
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=73.46 E-value=20 Score=25.59 Aligned_cols=91 Identities=14% Similarity=0.083 Sum_probs=54.3
Q ss_pred CCceEEEEeecC---ChhH-HHHHHHHHHhhcC-ceEEEEEeCCCcc--------------------------hhhhhhh
Q 031686 58 PLKLLWLFAAVH---DSEA-KSIFQETARAFKG-KLLFVYSQIYPKL--------------------------KGQIFDY 106 (155)
Q Consensus 58 ~~~~v~lf~~~~---~~~~-~~~~~~vA~~~~~-~i~F~~vd~~~~~--------------------------~~~~~~~ 106 (155)
++++++.|.... .-.. ...|.++++++++ .+.++.++.+... ...+.+.
T Consensus 56 Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i~~~ 135 (220)
T 1zye_A 56 GKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISRD 135 (220)
T ss_dssp TSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHHH
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEECCcHHHHHH
Confidence 355666666332 1234 6677888888853 4666666655310 1245566
Q ss_pred hCCCCC----CcceEEEEecCCCeeecC----CCCCCHHHHHHHHHHHHc
Q 031686 107 FGVTCY----TSRVIAVASIRKRKKYVL----NGELTLSNVKSFALDFLG 148 (155)
Q Consensus 107 ~gl~~~----~~P~v~i~~~~~~~kY~~----~~~~t~~~I~~Fi~~f~~ 148 (155)
||+... ..|++.|++.+..-.|.. +...+.++|.+.|+.++.
T Consensus 136 ygv~~~~~g~~~P~~~liD~~G~I~~~~~g~~~~~~~~~ell~~l~~l~~ 185 (220)
T 1zye_A 136 YGVLLEGPGLALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAFQF 185 (220)
T ss_dssp TTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHH
T ss_pred hCCeecCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHhhh
Confidence 776411 479999998753323322 223577889999988874
No 204
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=72.83 E-value=22 Score=24.99 Aligned_cols=36 Identities=8% Similarity=0.092 Sum_probs=23.0
Q ss_pred CCcceEEEEecCCCe---eecCCCCCCHHHHHHHHHHHH
Q 031686 112 YTSRVIAVASIRKRK---KYVLNGELTLSNVKSFALDFL 147 (155)
Q Consensus 112 ~~~P~v~i~~~~~~~---kY~~~~~~t~~~I~~Fi~~f~ 147 (155)
..+|.++++....+. -..+.|..+++++.+-++.+.
T Consensus 129 ~~~P~l~ii~~~~~~~~vl~~~~G~~~~~~ll~~L~~~~ 167 (178)
T 2ec4_A 129 DQFPLFLIIMGKRSSNEVLNVIQGNTTVDELMMRLMAAM 167 (178)
T ss_dssp TTCSEEEEECCCSSCCCEEEEECSCCCHHHHHHHHHHHH
T ss_pred CCCCeEEEEEcCCCceEEEEEEeCCCCHHHHHHHHHHHH
Confidence 459999999865321 123467788877665555443
No 205
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=70.43 E-value=23 Score=24.32 Aligned_cols=90 Identities=10% Similarity=0.109 Sum_probs=50.1
Q ss_pred CCceEEEEeecC---ChhH-HHHHHHHHHhhcC-ceEEEEEeCCCcc--------------------------hhhhhhh
Q 031686 58 PLKLLWLFAAVH---DSEA-KSIFQETARAFKG-KLLFVYSQIYPKL--------------------------KGQIFDY 106 (155)
Q Consensus 58 ~~~~v~lf~~~~---~~~~-~~~~~~vA~~~~~-~i~F~~vd~~~~~--------------------------~~~~~~~ 106 (155)
++++++.|.... .-.. ...|.++++++++ .+.++.++.+... ...+.+.
T Consensus 31 gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ 110 (192)
T 2h01_A 31 KKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSIARS 110 (192)
T ss_dssp TCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHHH
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEECCcHHHHHH
Confidence 345566665222 1123 5567777777753 4666666554210 1245566
Q ss_pred hCCC---CCCcceEEEEecCCCeeecCCC----CCCHHHHHHHHHHHH
Q 031686 107 FGVT---CYTSRVIAVASIRKRKKYVLNG----ELTLSNVKSFALDFL 147 (155)
Q Consensus 107 ~gl~---~~~~P~v~i~~~~~~~kY~~~~----~~t~~~I~~Fi~~f~ 147 (155)
||+. +...|++.|++.+..-.|...+ ..+.+.|.+.|+.+.
T Consensus 111 ~gv~~~~g~~~P~~~liD~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 158 (192)
T 2h01_A 111 YDVLFNESVALRAFVLIDKQGVVQHLLVNNLALGRSVDEILRLIDALQ 158 (192)
T ss_dssp TTCEETTTEECCEEEEECTTSBEEEEEEGGGSSGGGHHHHHHHHHHHH
T ss_pred hCCcCcCCceeeEEEEEcCCCEEEEEEeCCCCCCCCHHHHHHHHHHHh
Confidence 7775 1137999999875332333222 245778888888776
No 206
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=70.42 E-value=9.9 Score=26.66 Aligned_cols=35 Identities=3% Similarity=-0.114 Sum_probs=21.4
Q ss_pred ceEEEEecCCCeeecCCCCCCHHHHHHHHHHHHcC
Q 031686 115 RVIAVASIRKRKKYVLNGELTLSNVKSFALDFLGD 149 (155)
Q Consensus 115 P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~~G 149 (155)
|++.+++.+..-.+.+.+..+.+.+.+-|...++.
T Consensus 146 ~~~~liD~~G~i~~~~~g~~~~~~~~~~i~~~l~~ 180 (200)
T 2b7k_A 146 IFFYLMDPEGQFVDALGRNYDEKTGVDKIVEHVKS 180 (200)
T ss_dssp CCEEEECTTSCEEEEECTTCCTTHHHHHHHHHHHH
T ss_pred ceEEEECCCCcEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 47788887543344445556666666666666543
No 207
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=69.98 E-value=24 Score=24.37 Aligned_cols=90 Identities=9% Similarity=0.096 Sum_probs=52.3
Q ss_pred CCceEEEEeecC--C-hhH-HHHHHHHHHhhcC-ceEEEEEeCCCcc--------------------------hhhhhhh
Q 031686 58 PLKLLWLFAAVH--D-SEA-KSIFQETARAFKG-KLLFVYSQIYPKL--------------------------KGQIFDY 106 (155)
Q Consensus 58 ~~~~v~lf~~~~--~-~~~-~~~~~~vA~~~~~-~i~F~~vd~~~~~--------------------------~~~~~~~ 106 (155)
++++++.|.... . -.. ...|.++++++++ .+.++.++.+... ...+.+.
T Consensus 34 gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ 113 (197)
T 1qmv_A 34 GKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLSED 113 (197)
T ss_dssp TSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTCHHHHH
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEECCcHHHHHH
Confidence 445566666232 1 233 5677777888765 4777777665310 1245566
Q ss_pred hCCCCC----CcceEEEEecCCCeeecCCC----CCCHHHHHHHHHHHH
Q 031686 107 FGVTCY----TSRVIAVASIRKRKKYVLNG----ELTLSNVKSFALDFL 147 (155)
Q Consensus 107 ~gl~~~----~~P~v~i~~~~~~~kY~~~~----~~t~~~I~~Fi~~f~ 147 (155)
||+... ..|+..+++.+..-.+...+ .-+.+.+.+.++...
T Consensus 114 ~gv~~~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~e~l~~l~~l~ 162 (197)
T 1qmv_A 114 YGVLKTDEGIAYRGLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQAFQ 162 (197)
T ss_dssp TTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred cCCccCCCCceeeEEEEECCCCcEEEEEeCCCCCCCCHHHHHHHHHhcc
Confidence 776411 37999999875332332222 346788888888765
No 208
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=67.35 E-value=6.7 Score=23.05 Aligned_cols=43 Identities=9% Similarity=-0.015 Sum_probs=27.3
Q ss_pred HHHHHHHHHhhcCceEEEEEeCCCcchhhhhhhhCCCCCCcceEEE
Q 031686 74 KSIFQETARAFKGKLLFVYSQIYPKLKGQIFDYFGVTCYTSRVIAV 119 (155)
Q Consensus 74 ~~~~~~vA~~~~~~i~F~~vd~~~~~~~~~~~~~gl~~~~~P~v~i 119 (155)
...+.++++++..++.++-+|.+. ....+++.+|+. .+|++.+
T Consensus 19 ~~~l~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~gv~--~vPt~~i 61 (80)
T 2k8s_A 19 EQAVANAIDPSKYTVEIVHLGTDK-ARIAEAEKAGVK--SVPALVI 61 (80)
T ss_dssp HHHHHHHSCTTTEEEEEEETTTCS-STHHHHHHHTCC--EEEEEEE
T ss_pred HHHHHHHHHhcCCeEEEEEecCCh-hhHHHHHHcCCC--cCCEEEE
Confidence 556666776665455555555431 145667788886 4899876
No 209
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=66.54 E-value=31 Score=24.35 Aligned_cols=34 Identities=3% Similarity=-0.150 Sum_probs=23.3
Q ss_pred ceEEEEecCCCeeecCCCCCCHHHHHHHHHHHHc
Q 031686 115 RVIAVASIRKRKKYVLNGELTLSNVKSFALDFLG 148 (155)
Q Consensus 115 P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~~ 148 (155)
|+..+++.+..-.+.+.+..+++.|.+.|+..++
T Consensus 174 p~tflID~~G~i~~~~~g~~~~~~l~~~I~~ll~ 207 (208)
T 2f8a_A 174 FEKFLVGPDGVPLRRYSRRFQTIDIEPDIEALLS 207 (208)
T ss_dssp TCEEEECTTSCEEEEECTTSCGGGGHHHHHHHHC
T ss_pred ceEEEEcCCCcEEEEeCCCCCHHHHHHHHHHHhh
Confidence 7778888653334445566778888888887764
No 210
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=63.18 E-value=10 Score=26.99 Aligned_cols=44 Identities=16% Similarity=0.178 Sum_probs=31.1
Q ss_pred hhhhhCCCCCCcceEEEEecCCCeeecCCCCCCHHHHHHHHHHHHcCCCccC
Q 031686 103 IFDYFGVTCYTSRVIAVASIRKRKKYVLNGELTLSNVKSFALDFLGDKLRNQ 154 (155)
Q Consensus 103 ~~~~~gl~~~~~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~~Gkl~p~ 154 (155)
..+.+|+.+ .|+++| + | +| +.|..+.+.+.+.|+..+.|||+-+
T Consensus 155 ~a~~~gV~g--tPtfvv-n---G-~~-~~G~~~~e~l~~~i~~~~~~~~~~~ 198 (202)
T 3gha_A 155 LNQKMNIQA--TPTIYV-N---D-KV-IKNFADYDEIKETIEKELKGKLEHH 198 (202)
T ss_dssp HHHHTTCCS--SCEEEE-T---T-EE-CSCTTCHHHHHHHHHHHHHHC----
T ss_pred HHHHcCCCc--CCEEEE-C---C-EE-ecCCCCHHHHHHHHHHHHHhhhhhc
Confidence 345678875 799987 2 4 34 4566789999999999999999754
No 211
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=60.29 E-value=42 Score=23.71 Aligned_cols=90 Identities=10% Similarity=0.096 Sum_probs=50.6
Q ss_pred CCceEEEEeecC--C-hhH-HHHHHHHHHhhc-CceEEEEEeCCCcc--------------------------hhhhhhh
Q 031686 58 PLKLLWLFAAVH--D-SEA-KSIFQETARAFK-GKLLFVYSQIYPKL--------------------------KGQIFDY 106 (155)
Q Consensus 58 ~~~~v~lf~~~~--~-~~~-~~~~~~vA~~~~-~~i~F~~vd~~~~~--------------------------~~~~~~~ 106 (155)
++++++.|.... . -.. ...|.+++++++ ..+.++.+..+... ...+.+.
T Consensus 52 gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ 131 (213)
T 2i81_A 52 KKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSISKD 131 (213)
T ss_dssp TCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEECTTSHHHHH
T ss_pred CCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEECCchHHHHH
Confidence 345566666332 1 133 556777777775 34666666554310 1234556
Q ss_pred hCCC---CCCcceEEEEecCCCeeecCCC----CCCHHHHHHHHHHHH
Q 031686 107 FGVT---CYTSRVIAVASIRKRKKYVLNG----ELTLSNVKSFALDFL 147 (155)
Q Consensus 107 ~gl~---~~~~P~v~i~~~~~~~kY~~~~----~~t~~~I~~Fi~~f~ 147 (155)
||+. +...|+..|++.+..-.|...+ .-+.+.|.+.|+.++
T Consensus 132 ygv~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~ell~~l~~l~ 179 (213)
T 2i81_A 132 YNVLFDDSVSLRAFVLIDMNGIVQHLLVNNLAIGRSVDEILRIIDAIQ 179 (213)
T ss_dssp TTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred hCCccccCCcccEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 6664 1137889999875333343211 246788888888776
No 212
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=63.58 E-value=2 Score=27.99 Aligned_cols=20 Identities=10% Similarity=0.278 Sum_probs=14.2
Q ss_pred hhhhhhCCCCCCcceEEEEecC
Q 031686 102 QIFDYFGVTCYTSRVIAVASIR 123 (155)
Q Consensus 102 ~~~~~~gl~~~~~P~v~i~~~~ 123 (155)
.+.+.||+. ..|++++++.+
T Consensus 99 ~~~~~~~v~--~~P~~~lid~~ 118 (143)
T 2lus_A 99 NVTAKYGIT--GIPALVIVKKD 118 (143)
Confidence 456667765 37999988864
No 213
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=52.01 E-value=48 Score=21.85 Aligned_cols=89 Identities=13% Similarity=0.054 Sum_probs=51.5
Q ss_pred CCceEEEEeecC--C-hhH-HHHHHHHHHhhcCceEEEEEeCCCcc---------------------hhhhhhhhCCCCC
Q 031686 58 PLKLLWLFAAVH--D-SEA-KSIFQETARAFKGKLLFVYSQIYPKL---------------------KGQIFDYFGVTCY 112 (155)
Q Consensus 58 ~~~~v~lf~~~~--~-~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~---------------------~~~~~~~~gl~~~ 112 (155)
+++.++.|.... . -.. ...+.++++++ .++.++.++.+... ...+.+.||+...
T Consensus 44 gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~v~~~ 122 (167)
T 2jsy_A 44 GKVTIISVIPSIDTGVCDAQTRRFNEEAAKL-GDVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFGEAFGVYIK 122 (167)
T ss_dssp TSCEEEEECSCSTTSHHHHTHHHHHHHHHHH-SSCEEEEEECSSGGGTSCCGGGSSCTTEEEEEGGGTCHHHHHTTCBBT
T ss_pred CCeEEEEEecCCCCCchHHHHHHHHHHHHHc-CCCEEEEEECCCHHHHHHHHHhcCCCCceEeeCCchhHHHHHhCCccc
Confidence 456666666543 2 234 66788888888 66777776665311 1233455665431
Q ss_pred C----cceEEEEecCCCeeecCC-----CCCCHHHHHHHHHHHH
Q 031686 113 T----SRVIAVASIRKRKKYVLN-----GELTLSNVKSFALDFL 147 (155)
Q Consensus 113 ~----~P~v~i~~~~~~~kY~~~-----~~~t~~~I~~Fi~~f~ 147 (155)
. .|+..+++.+..-.|... .+.+.+.|.+.++..+
T Consensus 123 ~~g~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~~l~~~l~~ll 166 (167)
T 2jsy_A 123 ELRLLARSVFVLDENGKVVYAEYVSEATNHPNYEKPIEAAKALV 166 (167)
T ss_dssp TTCSBCCEEEEECTTSCEEEEEECSBTTSCCCSHHHHHHHHHHH
T ss_pred cCCceeeEEEEEcCCCcEEEEEecCCcCCCCCHHHHHHHHHHhh
Confidence 1 488999987533233321 2345678888887764
No 214
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=51.80 E-value=32 Score=19.80 Aligned_cols=65 Identities=12% Similarity=0.127 Sum_probs=39.3
Q ss_pred hH-HHHHHHHHHhhcCceEEEEEeCCCcc--hhhhhhhhCCCCCCcceEEEEecCCCeeecCCCCCCHHHHHHHHHHH
Q 031686 72 EA-KSIFQETARAFKGKLLFVYSQIYPKL--KGQIFDYFGVTCYTSRVIAVASIRKRKKYVLNGELTLSNVKSFALDF 146 (155)
Q Consensus 72 ~~-~~~~~~vA~~~~~~i~F~~vd~~~~~--~~~~~~~~gl~~~~~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f 146 (155)
.. ...|.+++.++++ +.|..+|.+... ...+.+.+|..-..+|++.+ + ++... ..+.|.+++++-
T Consensus 15 ~~~~~~l~~l~~~~~~-i~~~~vdi~~~~~~~~~l~~~~~~~~~~vP~i~~-~---g~~i~-----~~~~l~~~~~~~ 82 (85)
T 1ego_A 15 VRAKDLAEKLSNERDD-FQYQYVDIRAEGITKEDLQQKAGKPVETVPQIFV-D---QQHIG-----GYTDFAAWVKEN 82 (85)
T ss_dssp HHHHHHHHHHHHHHSS-CEEEEECHHHHTCCSHHHHHHTCCCSCCSCEEEE-T---TEEEE-----SSHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCC-ceEEEEecccChHHHHHHHHHhCCCCceeCeEEE-C---CEEEE-----CHHHHHHHHHHh
Confidence 44 6678888887664 888888876311 23566777732235899843 3 32211 136788877764
No 215
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=46.14 E-value=63 Score=21.51 Aligned_cols=38 Identities=11% Similarity=0.058 Sum_probs=26.4
Q ss_pred hhhhhCCCCCCcceEEEEecCCCeeecCCCCCCHHHHHHHHHHHHc
Q 031686 103 IFDYFGVTCYTSRVIAVASIRKRKKYVLNGELTLSNVKSFALDFLG 148 (155)
Q Consensus 103 ~~~~~gl~~~~~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~~ 148 (155)
..+.+|+.+ .|+++| + ++. +.|..+.+.+.+.|+..+.
T Consensus 136 ~a~~~gv~g--tPt~~i-~---g~~--~~G~~~~~~l~~~i~~~l~ 173 (175)
T 3gyk_A 136 LAQKLGFNG--TPSFVV-E---DAL--VPGFVEQSQLQDAVDRARK 173 (175)
T ss_dssp HHHHHTCCS--SSEEEE-T---TEE--ECSCCCHHHHHHHHHHHHH
T ss_pred HHHHcCCcc--CCEEEE-C---CEE--eeCCCCHHHHHHHHHHHHh
Confidence 345678765 799987 2 332 3566789999999987653
No 216
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=42.74 E-value=34 Score=26.06 Aligned_cols=59 Identities=15% Similarity=0.154 Sum_probs=38.3
Q ss_pred HHHHHHHHHhhcCceEEEEEeCCCc--chhhhhhhhCCCCCCcceEEEEecCCCeeecCCCCCCHHHHHHHHH
Q 031686 74 KSIFQETARAFKGKLLFVYSQIYPK--LKGQIFDYFGVTCYTSRVIAVASIRKRKKYVLNGELTLSNVKSFAL 144 (155)
Q Consensus 74 ~~~~~~vA~~~~~~i~F~~vd~~~~--~~~~~~~~~gl~~~~~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~ 144 (155)
...+.++|+++. ++-+|.++. .++++.+.+|+.. .|++.+ + |++| .|..+.++|.+|+.
T Consensus 216 ~p~le~lA~~l~----~Vd~d~~d~~~~~~~la~~~gI~~--vPT~~i-~---G~~~--~G~~~~~~L~~~l~ 276 (291)
T 3kp9_A 216 KELFGAAFDQVP----YVECSPNGPGTPQAQECTEAGITS--YPTWII-N---GRTY--TGVRSLEALAVASG 276 (291)
T ss_dssp HHHHGGGGGGSC----EEESCSSCSSSCCCHHHHTTTCCS--TTEEEE-T---TEEE--ESCCCHHHHHHHTC
T ss_pred HHHHHHHHHHcC----EEEEeecCchhhHHHHHHHcCCcc--cCeEEE-C---CEEe--cCCCCHHHHHHHHC
Confidence 556777776652 444442221 1567888899974 899765 3 4553 56778899998874
No 217
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=36.65 E-value=94 Score=20.74 Aligned_cols=35 Identities=17% Similarity=0.059 Sum_probs=22.9
Q ss_pred cceEEEEecCCCeeecCCC-CCCHHHHHHHHHHHHc
Q 031686 114 SRVIAVASIRKRKKYVLNG-ELTLSNVKSFALDFLG 148 (155)
Q Consensus 114 ~P~v~i~~~~~~~kY~~~~-~~t~~~I~~Fi~~f~~ 148 (155)
.|++.+++.+..-.+.+.+ ..++++|.+-|+....
T Consensus 127 ~~~~~lID~~G~i~~~~~g~~~~~~~i~~~l~~~~~ 162 (170)
T 3me7_A 127 PNVVVVLSPELQIKDYIYGVNYNYLEFVNALRLARG 162 (170)
T ss_dssp CCEEEEECTTSBEEEEEESSSCCHHHHHHHHHHHTT
T ss_pred CceEEEECCCCeEEEEEeCCCCCHHHHHHHHHHhhc
Confidence 5788888875332222233 5778999988887653
No 218
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=34.52 E-value=1.2e+02 Score=21.33 Aligned_cols=91 Identities=10% Similarity=0.068 Sum_probs=50.7
Q ss_pred CCCceEEEEee-cC-C-hhH-HHHHHHHHHhhcCc-eEEEEEeCCCcc--------------------------hhhhhh
Q 031686 57 SPLKLLWLFAA-VH-D-SEA-KSIFQETARAFKGK-LLFVYSQIYPKL--------------------------KGQIFD 105 (155)
Q Consensus 57 ~~~~~v~lf~~-~~-~-~~~-~~~~~~vA~~~~~~-i~F~~vd~~~~~--------------------------~~~~~~ 105 (155)
.++++++.|.. .- . -.. ...+.+++++++++ +.++.+..+... ...+.+
T Consensus 68 ~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 147 (222)
T 3ztl_A 68 RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISK 147 (222)
T ss_dssp TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEEECSSSHHHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhhccccccceeEEeCCchHHHH
Confidence 34556666663 32 2 233 66788888888754 777766665311 113445
Q ss_pred hhCCCC----CCcceEEEEecCCCeeecCCC----CCCHHHHHHHHHHHH
Q 031686 106 YFGVTC----YTSRVIAVASIRKRKKYVLNG----ELTLSNVKSFALDFL 147 (155)
Q Consensus 106 ~~gl~~----~~~P~v~i~~~~~~~kY~~~~----~~t~~~I~~Fi~~f~ 147 (155)
.||+.. ...|+..|++.+..-.|...+ +-..+++.+.++...
T Consensus 148 ~ygv~~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~~il~~l~~l~ 197 (222)
T 3ztl_A 148 AYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPVGRSVDETLRLLDAFQ 197 (222)
T ss_dssp HTTCBCTTTSSBCEEEEEECTTSEEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HcCCeecCCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHhh
Confidence 667641 147999999975322333221 234566666666543
No 219
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=30.78 E-value=1.6e+02 Score=21.58 Aligned_cols=47 Identities=11% Similarity=0.040 Sum_probs=30.1
Q ss_pred hhhhhhCCCCC-----CcceEEEEecCCCeeecCCC----CCCHHHHHHHHHHHHc
Q 031686 102 QIFDYFGVTCY-----TSRVIAVASIRKRKKYVLNG----ELTLSNVKSFALDFLG 148 (155)
Q Consensus 102 ~~~~~~gl~~~-----~~P~v~i~~~~~~~kY~~~~----~~t~~~I~~Fi~~f~~ 148 (155)
.+.+.||+... ..|++.|++.+..-++...+ .-+.+.|.+.|+.++.
T Consensus 107 ~ia~~ygv~~~~~g~~~~p~~fIID~dG~I~~~~~~~~~~gr~~~Ellr~I~alq~ 162 (249)
T 3a2v_A 107 TVARRLGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALKL 162 (249)
T ss_dssp HHHHHHTCCCTTCSSSCCEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHHH
T ss_pred HHHHHhCCccccCCCcccceEEEECCCCeEEEEEecCCcccchhHHHHHHHHHHHh
Confidence 56677887521 58999999975432332211 2367888888888763
No 220
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=30.40 E-value=39 Score=24.52 Aligned_cols=45 Identities=13% Similarity=0.072 Sum_probs=28.7
Q ss_pred hhhhhhCCCCCCcceEEEEecCCCeeecCCCCCCHHHHHHHHHHHHcC
Q 031686 102 QIFDYFGVTCYTSRVIAVASIRKRKKYVLNGELTLSNVKSFALDFLGD 149 (155)
Q Consensus 102 ~~~~~~gl~~~~~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~~G 149 (155)
++.+.+|+.+ .|++++.+.+ |+...+.|-.+.+.|.+.++...+.
T Consensus 190 ~l~~~~gv~g--tPt~vi~~~~-G~~~~~~G~~~~~~L~~~l~~~~~~ 234 (241)
T 1v58_A 190 KLMDDLGANV--TPAIYYMSKE-NTLQQAVGLPDQKTLNIIMGNKLQH 234 (241)
T ss_dssp HHHHHHTCCS--SCEEEEEETT-TEEEEEESSCCHHHHHHHTTC----
T ss_pred HHHHHcCCCC--CCEEEEECCC-CCEEEecCCCCHHHHHHHHHHHHHh
Confidence 4456788875 7999987642 4323445667889999888766543
No 221
>1fme_A FSD-EY peptide; beta-BETA-alpha, zinc finger, designed protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1fsd_A 1fsv_A 2k6r_A* 1psv_A
Probab=29.26 E-value=32 Score=16.14 Aligned_cols=13 Identities=15% Similarity=0.322 Sum_probs=11.2
Q ss_pred CHHHHHHHHHHHH
Q 031686 135 TLSNVKSFALDFL 147 (155)
Q Consensus 135 t~~~I~~Fi~~f~ 147 (155)
+...+++||+.|.
T Consensus 14 nekelrdfiekfk 26 (28)
T 1fme_A 14 NEKELRDFIEKFK 26 (28)
T ss_dssp CHHHHHHHHHHCC
T ss_pred cHHHHHHHHHHhc
Confidence 6789999999884
No 222
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=29.24 E-value=1.2e+02 Score=19.86 Aligned_cols=43 Identities=12% Similarity=0.054 Sum_probs=25.5
Q ss_pred hhhhhhCCCCC----CcceEEEEecCCCeeec-----CCCCCCHHHHHHHHH
Q 031686 102 QIFDYFGVTCY----TSRVIAVASIRKRKKYV-----LNGELTLSNVKSFAL 144 (155)
Q Consensus 102 ~~~~~~gl~~~----~~P~v~i~~~~~~~kY~-----~~~~~t~~~I~~Fi~ 144 (155)
.+.+.||+... ..|+..+++.+..-.|. ..++.+.+.+.+.++
T Consensus 113 ~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~il~~l~ 164 (166)
T 3p7x_A 113 SFGENYGVVMEELRLLARAVFVLDADNKVVYKEIVSEGTDFPDFDAALAAYK 164 (166)
T ss_dssp HHHHHHTCEETTTTEECCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHH
T ss_pred HHHHHhCCccccCCceeeEEEEECCCCeEEEEEEcCCcccCCCHHHHHHHHh
Confidence 56677776532 16999999975332332 122456677776665
No 223
>2a2p_A Selenoprotein M, SELM protein; redox enzyme, oxidoreductase; NMR {Mus musculus} SCOP: c.47.1.23
Probab=24.15 E-value=98 Score=20.72 Aligned_cols=32 Identities=6% Similarity=0.125 Sum_probs=21.3
Q ss_pred cceEEEEecCCCeeecCC-CCCCHHHHHHHHHH
Q 031686 114 SRVIAVASIRKRKKYVLN-GELTLSNVKSFALD 145 (155)
Q Consensus 114 ~P~v~i~~~~~~~kY~~~-~~~t~~~I~~Fi~~ 145 (155)
.|.+++.+.....+=.++ +.++.+.|.+|+++
T Consensus 56 ~P~LvL~D~~G~e~E~I~Iekw~~d~I~efL~e 88 (129)
T 2a2p_A 56 DPELVLLSRNYQELERIPLSQMTRDEINALVQE 88 (129)
T ss_dssp CCEEEEECSSSCCCEEEECSSSCHHHHHHHHHH
T ss_pred CCEEEEecCCCCEEEEeecccCCHHHHHHHHHH
Confidence 488888875422221222 46899999999986
No 224
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=23.90 E-value=54 Score=23.12 Aligned_cols=39 Identities=15% Similarity=0.163 Sum_probs=27.5
Q ss_pred hhhhhhhCCCCCCcceEEEEecCCCeeecCCCCCCHHHHHHHHHHH
Q 031686 101 GQIFDYFGVTCYTSRVIAVASIRKRKKYVLNGELTLSNVKSFALDF 146 (155)
Q Consensus 101 ~~~~~~~gl~~~~~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f 146 (155)
..+.+.+|+.+ .|++++.+ |+ .+.|-.+.+.|.++|+..
T Consensus 171 ~~l~~~~gV~g--TPt~vi~n---G~--~~~G~~~~~~l~~~l~~~ 209 (211)
T 1t3b_A 171 YELGIQFGVRG--TPSIVTST---GE--LIGGYLKPADLLRALEET 209 (211)
T ss_dssp HHHHHHHTCCS--SCEEECTT---SC--CCCSCCCHHHHHHHHHHC
T ss_pred HHHHHHcCCCc--CCEEEEeC---CE--EecCCCCHHHHHHHHHhc
Confidence 34557789875 79998733 43 345667899999998764
No 225
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=23.76 E-value=1.6e+02 Score=19.47 Aligned_cols=88 Identities=16% Similarity=0.085 Sum_probs=45.2
Q ss_pred CCceEEEEeecC--C-hhH-HHHHHHHHHhhcCceEEEEEeCCCcc--------------------hhhhhhhhCCCCC-
Q 031686 58 PLKLLWLFAAVH--D-SEA-KSIFQETARAFKGKLLFVYSQIYPKL--------------------KGQIFDYFGVTCY- 112 (155)
Q Consensus 58 ~~~~v~lf~~~~--~-~~~-~~~~~~vA~~~~~~i~F~~vd~~~~~--------------------~~~~~~~~gl~~~- 112 (155)
++++++.|.... . -.. ...+.+++++ .++.++.++.+... ...+.+.||+...
T Consensus 44 gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~--~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~ 121 (175)
T 1xvq_A 44 GKSVLLNIFPSVDTPVCATSVRTFDERAAA--SGATVLCVSKDLPFAQKRFCGAEGTENVMPASAFRDSFGEDYGVTIAD 121 (175)
T ss_dssp TSCEEEEECSCCCSSCCCHHHHHHHHHHHH--TTCEEEEEESSCHHHHTTCC------CEEEEECTTSSHHHHTTCBBCS
T ss_pred CCEEEEEEEeCCCCchHHHHHHHHHHHHhh--cCCEEEEEECCCHHHHHHHHHHcCCCCceEeeCCHHHHHHHhCCcccc
Confidence 446666665432 1 123 5566777666 45666666655210 1245566776432
Q ss_pred ------CcceEEEEecCCCeeecCC-CCC-CHHHHHHHHHHHH
Q 031686 113 ------TSRVIAVASIRKRKKYVLN-GEL-TLSNVKSFALDFL 147 (155)
Q Consensus 113 ------~~P~v~i~~~~~~~kY~~~-~~~-t~~~I~~Fi~~f~ 147 (155)
..|...+++.+..-.|... +.. ...++++.++.+.
T Consensus 122 ~~~~g~~~p~~~lid~~G~I~~~~~g~~~~~~~~~~~~l~~l~ 164 (175)
T 1xvq_A 122 GPMAGLLARAIVVIGADGNVAYTELVPEIAQEPNYEAALAALG 164 (175)
T ss_dssp STTTTSBCSEEEEECTTSBEEEEEECSBTTCCCCHHHHHHHHH
T ss_pred cccCCcccceEEEECCCCeEEEEEECCCcCCCCCHHHHHHHHH
Confidence 1388999987533334332 122 2334555555544
No 226
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=22.97 E-value=1.4e+02 Score=18.22 Aligned_cols=55 Identities=9% Similarity=0.046 Sum_probs=31.2
Q ss_pred ceEEEEEeCCCcc-hhhhhhhhCCCCCCcceEEEEecCCCeeecCCCCCCHHHHHHHHHHHH
Q 031686 87 KLLFVYSQIYPKL-KGQIFDYFGVTCYTSRVIAVASIRKRKKYVLNGELTLSNVKSFALDFL 147 (155)
Q Consensus 87 ~i~F~~vd~~~~~-~~~~~~~~gl~~~~~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~ 147 (155)
.+.|.++|.+... ..+.+....-....+|+|+|.+ +.... .++.+.|++.+....
T Consensus 28 gi~y~~idi~~d~~~~~~~~~~~~G~~tVP~I~i~D---g~~l~---~~~~~el~~~L~el~ 83 (92)
T 2lqo_A 28 RIAYDEVDIEHNRAAAEFVGSVNGGNRTVPTVKFAD---GSTLT---NPSADEVKAKLVKIA 83 (92)
T ss_dssp TCCCEEEETTTCHHHHHHHHHHSSSSSCSCEEEETT---SCEEE---SCCHHHHHHHHHHHH
T ss_pred CCceEEEEcCCCHHHHHHHHHHcCCCCEeCEEEEeC---CEEEe---CCCHHHHHHHHHHhc
Confidence 4778888887521 2222222211123589988744 22211 468889999888764
No 227
>2rqw_B 24-meric peptide from serine/threonine-protein KI STE20; BEM1P, STE20P, SH3CI, PRR, cytoplasm, cytoskeleton, SH3 DOMA cycle; NMR {Saccharomyces cerevisiae}
Probab=21.58 E-value=22 Score=16.89 Aligned_cols=10 Identities=50% Similarity=0.949 Sum_probs=6.5
Q ss_pred eccCCceeee
Q 031686 4 SASNGRFIHA 13 (155)
Q Consensus 4 ~~~~~~~~~~ 13 (155)
|++|++||-+
T Consensus 2 ~~~~eKFiPs 11 (26)
T 2rqw_B 2 SSANGKFIPS 11 (26)
T ss_dssp CCCCCSSCCS
T ss_pred cccccccccC
Confidence 5677777654
No 228
>3r8n_P 30S ribosomal protein S16; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 1p6g_P 1p87_P* 1vs7_P* 2avy_P 2aw7_P 1vs5_P 2i2u_P 2i2p_P* 2qan_P* 2qb9_P* 2qbb_P* 2qbd_P 2qbf_P 2qbh_P* 2qbj_P* 2qou_P* 2qow_P* 2qoy_P* 2qp0_P* 2vho_P ...
Probab=20.82 E-value=68 Score=19.70 Aligned_cols=39 Identities=26% Similarity=0.407 Sum_probs=27.9
Q ss_pred eccCCceeeeeeeeEEEeccC----CcCHHHHHHHHHhCCCCC
Q 031686 4 SASNGRFIHALSVFCFIFSDV----SFTISVIDDFISLNKIPP 42 (155)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~y~g----~~~~~~l~~fI~~~~~P~ 42 (155)
+..+||||--+|-.+-..=.+ .++.+-+..||..-..|.
T Consensus 26 ~~RdGr~IE~lG~YnP~~~~~~~~v~l~~eri~~Wl~~GAqpt 68 (82)
T 3r8n_P 26 NARNGRFIERVGFFNPIASEKEEGTRLDLDRIAHWVGQGATIS 68 (82)
T ss_dssp SCTTSCEEEEEEEECTTCCSSSCCCCCCHHHHHHHHHHTCEEC
T ss_pred CCCCCCceeeeeEEcCCCCCCcceEEEcHHHHHHHHHCCCccC
Confidence 456899998888655432211 367899999999987764
No 229
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=20.59 E-value=58 Score=22.97 Aligned_cols=40 Identities=13% Similarity=0.125 Sum_probs=27.3
Q ss_pred hhhhhhhCCCCCCcceEEEEecCCCeeecCCCCCCHHHHHHHHHHHH
Q 031686 101 GQIFDYFGVTCYTSRVIAVASIRKRKKYVLNGELTLSNVKSFALDFL 147 (155)
Q Consensus 101 ~~~~~~~gl~~~~~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~ 147 (155)
..+.+.+|+.+ .|++++.+ +.. +.|..+.+.|.++++...
T Consensus 171 ~~l~~~~gV~g--tPt~v~~d---G~~--~~G~~~~~~l~~~l~~~~ 210 (216)
T 1eej_A 171 YALGVQLGVSG--TPAVVLSN---GTL--VPGYQPPKEMKEFLDEHQ 210 (216)
T ss_dssp HHHHHHHTCCS--SSEEECTT---SCE--EESCCCHHHHHHHHHHHH
T ss_pred HHHHHHcCCCc--cCEEEEcC---CeE--ecCCCCHHHHHHHHHHhh
Confidence 34567788875 79986533 322 346678899999988764
No 230
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=20.19 E-value=2e+02 Score=19.06 Aligned_cols=40 Identities=25% Similarity=0.372 Sum_probs=23.7
Q ss_pred hhhcCCCceEEEEeecCChhH-HHHHHH---HHHhhcCceEEEE
Q 031686 53 LILNSPLKLLWLFAAVHDSEA-KSIFQE---TARAFKGKLLFVY 92 (155)
Q Consensus 53 ~i~~~~~~~v~lf~~~~~~~~-~~~~~~---vA~~~~~~i~F~~ 92 (155)
.++.++..++.+.+..+|.+. .+++++ -|++|.+.+++..
T Consensus 76 ~imgsgsgvm~i~f~gddlea~ekalkemirqarkfagtvtytl 119 (170)
T 4hhu_A 76 QIMGSGSGVMVIVFEGDDLEALEKALKEMIRQARKFAGTVTYTL 119 (170)
T ss_dssp EEECTTCCEEEEEEECSCHHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEeCCceEEEEEEecCcHHHHHHHHHHHHHHHHhhcceEEEEE
Confidence 366777777655555555444 445444 5667776555443
No 231
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=20.10 E-value=1.4e+02 Score=20.07 Aligned_cols=42 Identities=5% Similarity=-0.002 Sum_probs=25.8
Q ss_pred hhhhhhCCCCCCcceEEEEecCCCeeecCCCCCCHHHHHHHHHHHHcCCC
Q 031686 102 QIFDYFGVTCYTSRVIAVASIRKRKKYVLNGELTLSNVKSFALDFLGDKL 151 (155)
Q Consensus 102 ~~~~~~gl~~~~~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~f~~Gkl 151 (155)
...+.+|+.+ .|+++| + |+ + +.|..+.+.+.+.|+..+.+..
T Consensus 140 ~~a~~~gv~G--tPt~vv-n---G~-~-~~G~~~~~~l~~~i~~~~~~~~ 181 (186)
T 3bci_A 140 KIAKDNHIKT--TPTAFI-N---GE-K-VEDPYDYESYEKLLKDKIKLEH 181 (186)
T ss_dssp HHHHHTTCCS--SSEEEE-T---TE-E-CSCTTCHHHHHHHHHC------
T ss_pred HHHHHcCCCC--CCeEEE-C---CE-E-cCCCCCHHHHHHHHHHHHHhhh
Confidence 3456678875 799987 3 43 3 3566788999999988776653
No 232
>1xg8_A Hypothetical protein SA0798; structural genomics, protein structure initative, MCSG, PSI, protein structure initiative; 2.10A {Staphylococcus aureus subsp} SCOP: c.47.1.17
Probab=20.04 E-value=1.9e+02 Score=18.72 Aligned_cols=69 Identities=14% Similarity=0.218 Sum_probs=39.8
Q ss_pred HHHHHHH--HhhcC-ceEEEEEeCCCcc-h--h---hhhhhhCCCCCCcceEEEEecCCCeeecCCCCCCHHHHHHHHHH
Q 031686 75 SIFQETA--RAFKG-KLLFVYSQIYPKL-K--G---QIFDYFGVTCYTSRVIAVASIRKRKKYVLNGELTLSNVKSFALD 145 (155)
Q Consensus 75 ~~~~~vA--~~~~~-~i~F~~vd~~~~~-~--~---~~~~~~gl~~~~~P~v~i~~~~~~~kY~~~~~~t~~~I~~Fi~~ 145 (155)
-.+.++| |||.+ .+.|.++|...+. . . ++.+..--++--.|.|++- + .+.-+|......|-+++++
T Consensus 32 yEWLqAal~RKyp~~~f~~~YIDI~~~~~~l~d~~~~~ae~I~ede~FYPlV~in----d-eiVaEGnp~LK~I~~~ie~ 106 (111)
T 1xg8_A 32 YDWLQPLLKRKYPNISFKYTYIDITKDNDNLTDHDLQFIERIEQDELFYPLITMN----D-EYVADGYIQTKQITRFIDQ 106 (111)
T ss_dssp HHHHHHHHHHHCTTSCEEEEEEETTTC---CCHHHHHHHHHHHTTSSCSSEEEET----T-EEEEESSCCHHHHHHHHHH
T ss_pred HHHHHHHHhCcCCCCceEEEEEeccCCccchhHHHHHHHHHHhhccccceEEEEC----C-EEeecCCccHHHHHHHHHH
Confidence 3444444 66754 5999999986532 1 1 2333322222236877652 2 3444566788899999988
Q ss_pred HHc
Q 031686 146 FLG 148 (155)
Q Consensus 146 f~~ 148 (155)
.+.
T Consensus 107 ~~~ 109 (111)
T 1xg8_A 107 KLV 109 (111)
T ss_dssp HHH
T ss_pred Hhh
Confidence 753
Done!