BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031689
(155 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224134699|ref|XP_002327468.1| predicted protein [Populus trichocarpa]
gi|222836022|gb|EEE74443.1| predicted protein [Populus trichocarpa]
Length = 283
Score = 159 bits (402), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 76/137 (55%), Positives = 100/137 (72%), Gaps = 5/137 (3%)
Query: 14 FLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWI 73
FLAEIGAL ++D+ND CL LK+I++K++ E++GCSWELFEVY+HLKSLGY+VGRHGVPW
Sbjct: 83 FLAEIGALLVMDDNDECLALKDIHKKMSEERNGCSWELFEVYKHLKSLGYVVGRHGVPWS 142
Query: 74 VKIPKGRDINITSDPVSLQVTPKRHGVMDVEPKEESSLVALFYNIQINEVRPVFDVYLPN 133
+K + S P S Q T + + V VE + V + N+Q++E+R FDVYLPN
Sbjct: 143 MK-----GVENNSKPCSSQGTIQNNRVEGVEENSITCAVQMLSNLQVDELRLNFDVYLPN 197
Query: 134 RKFKKSCPGDPSFLLYL 150
KF+KS PGDP+FLL L
Sbjct: 198 SKFRKSSPGDPAFLLCL 214
>gi|225441894|ref|XP_002284389.1| PREDICTED: uncharacterized protein LOC100257347 [Vitis vinifera]
Length = 255
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/138 (55%), Positives = 96/138 (69%), Gaps = 7/138 (5%)
Query: 14 FLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWI 73
FLAE+GAL+LLD+ND+ + LK IY+K++ K GC WE FE YRHLKSLGYIVGRHG+PW
Sbjct: 79 FLAELGALHLLDDNDVPISLKGIYDKVSQGKCGCCWESFEAYRHLKSLGYIVGRHGIPWT 138
Query: 74 VKIPKGRDINITSDPVSLQVTPKRHGVMDVEPKEESSLVALFYNIQINEVRPVFDVYLPN 133
K K + S Q TP+ + D +EE+S + L N+ I EV+ +FDVYLPN
Sbjct: 139 SKGAK-------TCLDSHQGTPEGNSRTDEGSEEENSTIELVNNMHITEVKLLFDVYLPN 191
Query: 134 RKFKKSCPGDPSFLLYLT 151
KF+KS PGDPSF+L LT
Sbjct: 192 SKFRKSSPGDPSFVLCLT 209
>gi|297739626|emb|CBI29808.3| unnamed protein product [Vitis vinifera]
Length = 281
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/138 (55%), Positives = 96/138 (69%), Gaps = 7/138 (5%)
Query: 14 FLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWI 73
FLAE+GAL+LLD+ND+ + LK IY+K++ K GC WE FE YRHLKSLGYIVGRHG+PW
Sbjct: 105 FLAELGALHLLDDNDVPISLKGIYDKVSQGKCGCCWESFEAYRHLKSLGYIVGRHGIPWT 164
Query: 74 VKIPKGRDINITSDPVSLQVTPKRHGVMDVEPKEESSLVALFYNIQINEVRPVFDVYLPN 133
K K + S Q TP+ + D +EE+S + L N+ I EV+ +FDVYLPN
Sbjct: 165 SKGAK-------TCLDSHQGTPEGNSRTDEGSEEENSTIELVNNMHITEVKLLFDVYLPN 217
Query: 134 RKFKKSCPGDPSFLLYLT 151
KF+KS PGDPSF+L LT
Sbjct: 218 SKFRKSSPGDPSFVLCLT 235
>gi|147790314|emb|CAN74373.1| hypothetical protein VITISV_010199 [Vitis vinifera]
Length = 1843
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 75/138 (54%), Positives = 95/138 (68%), Gaps = 7/138 (5%)
Query: 14 FLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWI 73
FLAE+GAL+LLD+ D+ + LK IY+K++ K GC WE FE YRHLKSLGYIVGRHG+PW
Sbjct: 1108 FLAELGALHLLDDXDVPISLKGIYDKVSQGKCGCCWESFEAYRHLKSLGYIVGRHGIPW- 1166
Query: 74 VKIPKGRDINITSDPVSLQVTPKRHGVMDVEPKEESSLVALFYNIQINEVRPVFDVYLPN 133
KG + S Q TP+ + D +EE+S + L N+ I EV+ +FDVYLPN
Sbjct: 1167 --TSKGXKTCLDSH----QGTPEGNSRTDXGSEEENSTIELVNNMHITEVKLLFDVYLPN 1220
Query: 134 RKFKKSCPGDPSFLLYLT 151
KF+KS PGDPSF+L LT
Sbjct: 1221 SKFRKSSPGDPSFVLCLT 1238
>gi|356503431|ref|XP_003520512.1| PREDICTED: uncharacterized protein LOC100811412 [Glycine max]
Length = 264
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/140 (52%), Positives = 99/140 (70%), Gaps = 7/140 (5%)
Query: 14 FLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWI 73
+L E+GAL LLDN + L E YEK+A+ KSGC WELF+VYRHLKS+GYI+GRHGV W
Sbjct: 55 YLMELGALDLLDNGGRSISLTETYEKVASGKSGCCWELFDVYRHLKSIGYIIGRHGVAWS 114
Query: 74 VKIPKGRDINITSDPVSLQVTPKRHGVMDVEPKEESSL--VALFYNIQINEVRPVFDVYL 131
+K I + + + L+ + + D++ K E S+ + LF +Q+N++RP FDVYL
Sbjct: 115 LK-----SIKVPINLLLLKSQKEIEQLEDIDSKSELSINELWLFGEMQVNDLRPDFDVYL 169
Query: 132 PNRKFKKSCPGDPSFLLYLT 151
PN +F+KSCPGDPSFLLYL+
Sbjct: 170 PNSRFRKSCPGDPSFLLYLS 189
>gi|255572755|ref|XP_002527310.1| conserved hypothetical protein [Ricinus communis]
gi|223533310|gb|EEF35062.1| conserved hypothetical protein [Ricinus communis]
Length = 261
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/138 (55%), Positives = 96/138 (69%), Gaps = 9/138 (6%)
Query: 14 FLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWI 73
FLAE+GAL L+D+ CL LK++Y K+ +KSGC ELFEVYRHLKSLGYIVGRHGVPW
Sbjct: 85 FLAELGALVLMDDEGTCLSLKDLYGKMGYQKSGCCSELFEVYRHLKSLGYIVGRHGVPWS 144
Query: 74 VKIPKGRDINITSDPVSLQVTPKRHG-VMDVEPKEESSLVALFYNIQINEVRPVFDVYLP 132
+ KG SD T + +G V+D E KE +S+V N+Q++E+R FDVYLP
Sbjct: 145 M---KGVKSTCQSDS-----THENNGVVIDNEVKETASIVQRLRNLQVDELRLDFDVYLP 196
Query: 133 NRKFKKSCPGDPSFLLYL 150
N KF+KS PG+P+F L L
Sbjct: 197 NSKFRKSSPGEPAFFLCL 214
>gi|449449845|ref|XP_004142675.1| PREDICTED: uncharacterized protein LOC101210680 [Cucumis sativus]
gi|449525862|ref|XP_004169935.1| PREDICTED: uncharacterized LOC101210680 [Cucumis sativus]
Length = 267
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/142 (49%), Positives = 99/142 (69%), Gaps = 8/142 (5%)
Query: 14 FLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWI 73
FL E+GAL+LLD+++ L LK++Y+K+A +SG WE FEVYRHLKSLGYIVG+H VPW
Sbjct: 90 FLIEVGALHLLDHDNSSLSLKDVYKKVAEGRSGRLWEQFEVYRHLKSLGYIVGKHRVPWS 149
Query: 74 VKIPKGRDINITSD-PVSLQVTPKRHGVMDVEPKEESSLVALFYNIQINEVRPVFDVYLP 132
+K N+ +D +S + + G DV+ +E S+ L IQ++EV P+FDV+LP
Sbjct: 150 LK-------NVRNDCDISSPSSTENKGASDVKSDDEQSICRLLNAIQLDEVTPIFDVFLP 202
Query: 133 NRKFKKSCPGDPSFLLYLTCKY 154
+ KF+KS PGDP+F++ LT Y
Sbjct: 203 HNKFRKSSPGDPNFMVCLTRGY 224
>gi|356570446|ref|XP_003553398.1| PREDICTED: uncharacterized protein LOC100782940 [Glycine max]
Length = 272
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 70/141 (49%), Positives = 93/141 (65%), Gaps = 3/141 (2%)
Query: 14 FLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWI 73
+L E+GAL+L+DN + L E+YEK+A+ KSGC WELFEVYRHLKSLGYI+G HGV W
Sbjct: 87 YLMELGALHLVDNGGRSISLTEMYEKVASGKSGCCWELFEVYRHLKSLGYIIGCHGVAWS 146
Query: 74 VK--IPKGRDINITSDPVSLQVTPKRHGVMDVEPKEESSLV-ALFYNIQINEVRPVFDVY 130
+K I + + + D + + + S+ LF +QIN++RP FDVY
Sbjct: 147 LKKIIGEHKKSHRQHDFAHSNKSISHFSFLTNAFRALVSICHKLFGKLQINDLRPDFDVY 206
Query: 131 LPNRKFKKSCPGDPSFLLYLT 151
LPN +F+KS PGDPSFLLYL+
Sbjct: 207 LPNSRFRKSSPGDPSFLLYLS 227
>gi|238014748|gb|ACR38409.1| unknown [Zea mays]
Length = 212
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/143 (46%), Positives = 91/143 (63%), Gaps = 5/143 (3%)
Query: 8 LRRLCRFLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGR 67
L + CRFLAE+GAL LL++ D + +++IY K+A GCSW+ F+ Y+HLKSLGYIVGR
Sbjct: 28 LMKTCRFLAEMGALILLNDKDETIGIEDIYGKLAGGNYGCSWDTFQAYKHLKSLGYIVGR 87
Query: 68 HGVPWIVKIPKGRDINITSDPVSLQVTPKRHGVMDVEPKEESSLVALFYNIQINEVRPVF 127
GVPW +K G + + +++ T + +D + + L IQI+ + P F
Sbjct: 88 FGVPWTMK--HGGTHHTIAPQINILETDQSLNRVD---GASNDITKLLKEIQIDGICPSF 142
Query: 128 DVYLPNRKFKKSCPGDPSFLLYL 150
+VYLPN KFKKS PG PSFLL L
Sbjct: 143 EVYLPNSKFKKSSPGCPSFLLCL 165
>gi|240255663|ref|NP_191295.4| uncharacterized protein [Arabidopsis thaliana]
gi|50198814|gb|AAT70440.1| At3g57360 [Arabidopsis thaliana]
gi|51972142|gb|AAU15175.1| At3g57360 [Arabidopsis thaliana]
gi|332646125|gb|AEE79646.1| uncharacterized protein [Arabidopsis thaliana]
Length = 254
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 64/138 (46%), Positives = 89/138 (64%), Gaps = 19/138 (13%)
Query: 14 FLAEIGALYLLDN-NDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPW 72
+L+EIG L +L N +D+ +PLK++YEKIA EKSGCSWE +EVYR+LK LGYI+GRHGV W
Sbjct: 83 YLSEIGELQILGNEDDIVIPLKDLYEKIAEEKSGCSWENYEVYRYLKGLGYILGRHGVSW 142
Query: 73 IVKI---PKGRDINITSDPVSLQVTPKRHGVMDVEPKEESSLVALFYNIQINEVRPVFDV 129
+K P G + + + P + ++ L ++QI + + VFDV
Sbjct: 143 TLKDAARPNGEEESACAGEC---------------PADNDTVTKLLGDMQICDAKAVFDV 187
Query: 130 YLPNRKFKKSCPGDPSFL 147
YLPN +FKKS PG+PSF+
Sbjct: 188 YLPNSRFKKSSPGEPSFV 205
>gi|326499365|dbj|BAK06173.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 272
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/137 (48%), Positives = 83/137 (60%), Gaps = 5/137 (3%)
Query: 14 FLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWI 73
FLAE GAL LLD+ D+ + ++EIY KIA GCSW F+ Y+HLK LGYIVGR+GVPW
Sbjct: 94 FLAERGALVLLDDKDVTVGMEEIYRKIAGGSYGCSWLTFQAYKHLKLLGYIVGRYGVPWT 153
Query: 74 VKIPKGRDINITSDPVSLQVTPKRHGVMDVEPKEESSLVALFYNIQINEVRPVFDVYLPN 133
+K R +T P S+ T G D + + L I I+ + P F+V LPN
Sbjct: 154 IK--HSRSGEVTDSPESMDNTNLSFGRADA---ARNDITKLLKGIHIDRMYPSFEVRLPN 208
Query: 134 RKFKKSCPGDPSFLLYL 150
KFKKS PG PSFL+ L
Sbjct: 209 SKFKKSSPGAPSFLVCL 225
>gi|357159225|ref|XP_003578379.1| PREDICTED: uncharacterized protein LOC100839648 [Brachypodium
distachyon]
Length = 273
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/137 (46%), Positives = 85/137 (62%), Gaps = 5/137 (3%)
Query: 14 FLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWI 73
FLAE GAL LLDN D + +++IY+KIA GCSW+ F+ Y+HLK LGYI+GRHGVPW
Sbjct: 95 FLAERGALVLLDNKDETIGMQDIYKKIAGGNYGCSWDAFQAYKHLKLLGYIIGRHGVPWT 154
Query: 74 VKIPKGRDINITSDPVSLQVTPKRHGVMDVEPKEESSLVALFYNIQINEVRPVFDVYLPN 133
+K +I +S V+ D + + LF + I+++ P F+V+LPN
Sbjct: 155 LKHSCTSEITDSSKSVT-----DTDWSFDRANGACNDITKLFKEMHIDDIYPSFEVHLPN 209
Query: 134 RKFKKSCPGDPSFLLYL 150
KFKKS PG PSFLL L
Sbjct: 210 SKFKKSSPGLPSFLLCL 226
>gi|218202415|gb|EEC84842.1| hypothetical protein OsI_31942 [Oryza sativa Indica Group]
Length = 280
Score = 121 bits (304), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 63/137 (45%), Positives = 87/137 (63%), Gaps = 3/137 (2%)
Query: 14 FLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWI 73
FLAE GAL LLD + ++EIY KIA K GCSW+ F+ Y+HLK LGYI+GR+GVPW
Sbjct: 100 FLAERGALVLLDYEGETIGMEEIYGKIAGGKYGCSWDAFQAYKHLKLLGYIIGRYGVPWT 159
Query: 74 VKIPKGRDINITSDPVSLQVTPKRHGVMDVEPKEESSLVALFYNIQINEVRPVFDVYLPN 133
VK + ++T S+ T + + V+ + + L + I+++ P F+VYLPN
Sbjct: 160 VK--RSHTYSVTDASTSVVETDQIQSLNRVD-GASNDITKLLKEMCIDDMHPSFEVYLPN 216
Query: 134 RKFKKSCPGDPSFLLYL 150
KFKK+ PGDPSF+L L
Sbjct: 217 SKFKKTSPGDPSFVLCL 233
>gi|115480007|ref|NP_001063597.1| Os09g0504800 [Oryza sativa Japonica Group]
gi|113631830|dbj|BAF25511.1| Os09g0504800 [Oryza sativa Japonica Group]
gi|215706480|dbj|BAG93336.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222641873|gb|EEE70005.1| hypothetical protein OsJ_29924 [Oryza sativa Japonica Group]
Length = 280
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/137 (45%), Positives = 86/137 (62%), Gaps = 3/137 (2%)
Query: 14 FLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWI 73
FLAE GAL LLD + ++EIY KIA K GCSW+ F+ Y+HLK LGYI+GR+GVPW
Sbjct: 100 FLAERGALVLLDYEGETIGMEEIYGKIAGGKYGCSWDAFQAYKHLKLLGYIIGRYGVPWT 159
Query: 74 VKIPKGRDINITSDPVSLQVTPKRHGVMDVEPKEESSLVALFYNIQINEVRPVFDVYLPN 133
VK + ++T S+ T + + V + + L + I+++ P F+VYLPN
Sbjct: 160 VK--RSHTYSVTDASTSVVETDQIQSLNRV-GGASNDITKLLKEMCIDDMHPSFEVYLPN 216
Query: 134 RKFKKSCPGDPSFLLYL 150
KFKK+ PGDPSF+L L
Sbjct: 217 SKFKKTSPGDPSFVLCL 233
>gi|414589896|tpg|DAA40467.1| TPA: hypothetical protein ZEAMMB73_137888 [Zea mays]
Length = 205
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/137 (45%), Positives = 87/137 (63%), Gaps = 5/137 (3%)
Query: 14 FLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWI 73
FLAE+GAL LL++ D + +++IY K+A GCSW+ F+ Y+HLKSLGYIVGR GVPW
Sbjct: 72 FLAEMGALILLNDKDETIGIEDIYGKLAGGNYGCSWDTFQAYKHLKSLGYIVGRFGVPWT 131
Query: 74 VKIPKGRDINITSDPVSLQVTPKRHGVMDVEPKEESSLVALFYNIQINEVRPVFDVYLPN 133
+K G + + +++ T + +D + + L IQI+ + P F+VYLPN
Sbjct: 132 MK--HGGTHHTIAPQINILETDQSLNRVDGASND---ITKLLKEIQIDGICPSFEVYLPN 186
Query: 134 RKFKKSCPGDPSFLLYL 150
KFKKS PG PSFLL L
Sbjct: 187 SKFKKSSPGCPSFLLCL 203
>gi|414589893|tpg|DAA40464.1| TPA: hypothetical protein ZEAMMB73_137888 [Zea mays]
Length = 297
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/137 (45%), Positives = 87/137 (63%), Gaps = 5/137 (3%)
Query: 14 FLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWI 73
FLAE+GAL LL++ D + +++IY K+A GCSW+ F+ Y+HLKSLGYIVGR GVPW
Sbjct: 119 FLAEMGALILLNDKDETIGIEDIYGKLAGGNYGCSWDTFQAYKHLKSLGYIVGRFGVPWT 178
Query: 74 VKIPKGRDINITSDPVSLQVTPKRHGVMDVEPKEESSLVALFYNIQINEVRPVFDVYLPN 133
+K G + + +++ T + +D + + L IQI+ + P F+VYLPN
Sbjct: 179 MK--HGGTHHTIAPQINILETDQSLNRVD---GASNDITKLLKEIQIDGICPSFEVYLPN 233
Query: 134 RKFKKSCPGDPSFLLYL 150
KFKKS PG PSFLL L
Sbjct: 234 SKFKKSSPGCPSFLLCL 250
>gi|212723584|ref|NP_001131753.1| hypothetical protein [Zea mays]
gi|194692434|gb|ACF80301.1| unknown [Zea mays]
gi|414589895|tpg|DAA40466.1| TPA: hypothetical protein ZEAMMB73_137888 [Zea mays]
Length = 250
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 63/137 (45%), Positives = 87/137 (63%), Gaps = 5/137 (3%)
Query: 14 FLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWI 73
FLAE+GAL LL++ D + +++IY K+A GCSW+ F+ Y+HLKSLGYIVGR GVPW
Sbjct: 72 FLAEMGALILLNDKDETIGIEDIYGKLAGGNYGCSWDTFQAYKHLKSLGYIVGRFGVPWT 131
Query: 74 VKIPKGRDINITSDPVSLQVTPKRHGVMDVEPKEESSLVALFYNIQINEVRPVFDVYLPN 133
+K G + + +++ T + +D + + L IQI+ + P F+VYLPN
Sbjct: 132 MK--HGGTHHTIAPQINILETDQSLNRVD---GASNDITKLLKEIQIDGICPSFEVYLPN 186
Query: 134 RKFKKSCPGDPSFLLYL 150
KFKKS PG PSFLL L
Sbjct: 187 SKFKKSSPGCPSFLLCL 203
>gi|297817060|ref|XP_002876413.1| At3g57360 [Arabidopsis lyrata subsp. lyrata]
gi|297322251|gb|EFH52672.1| At3g57360 [Arabidopsis lyrata subsp. lyrata]
Length = 256
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 89/135 (65%), Gaps = 11/135 (8%)
Query: 14 FLAEIGALYLLDN-NDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPW 72
+L+EIG L +L N +D+ +PLK++YEK+A EKSGCSW+ +EVYR+LK LGYI+GR+G+ W
Sbjct: 83 YLSEIGELQILSNEDDIVIPLKDLYEKMAEEKSGCSWDNYEVYRYLKGLGYILGRNGISW 142
Query: 73 IVKIPKGRDINITSDPVSLQVTPKRHGVMDVEPKEESSLVALFYNIQINEVRPVFDVYLP 132
+K D IT + + D + ++ L ++QI + + VFDVYLP
Sbjct: 143 TLK-----DAAITRPNGEEESACAGECLED-----KDTVTKLLGDMQICDAKAVFDVYLP 192
Query: 133 NRKFKKSCPGDPSFL 147
N +FKKS PG+PSF+
Sbjct: 193 NSRFKKSSPGEPSFV 207
>gi|6957701|gb|AAF32445.1| hypothetical protein [Arabidopsis thaliana]
Length = 168
Score = 118 bits (295), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 84/136 (61%), Gaps = 11/136 (8%)
Query: 13 RFLAEIGALYLL-DNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVP 71
R+L+EIG L LL D +D+ + LK++Y +IA K GC WE +EVYR+LK LGYI+GRHGVP
Sbjct: 38 RYLSEIGELQLLGDEDDVVISLKDLYGEIAEGKYGCCWENYEVYRYLKGLGYILGRHGVP 97
Query: 72 WIVKIPKGRDINITSDPVSLQVTPKRHGVMDVEPKEESSLVALFYNIQINEVRPVFDVYL 131
W K +N T + ++ S+ L ++ I + RPVFDVYL
Sbjct: 98 WTTKYA----VNTTPSDEDESLCAAEF------FQDRDSVTKLLSDMHICDARPVFDVYL 147
Query: 132 PNRKFKKSCPGDPSFL 147
PN +FKKS PG+PSF+
Sbjct: 148 PNSQFKKSSPGEPSFV 163
>gi|297828688|ref|XP_002882226.1| hypothetical protein ARALYDRAFT_317116 [Arabidopsis lyrata subsp.
lyrata]
gi|297328066|gb|EFH58485.1| hypothetical protein ARALYDRAFT_317116 [Arabidopsis lyrata subsp.
lyrata]
Length = 252
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 62/140 (44%), Positives = 85/140 (60%), Gaps = 21/140 (15%)
Query: 14 FLAEIGALYLL-DNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPW 72
+L+EIG L LL D +D+ + LK++Y +IA K GC WE +EVYR+LK LGYI+GRHGVPW
Sbjct: 79 YLSEIGELQLLGDEDDVVISLKDLYREIAEGKCGCCWEDYEVYRYLKGLGYILGRHGVPW 138
Query: 73 IVK-----IPKGRDINITSDPVSLQVTPKRHGVMDVEPKEESSLVALFYNIQINEVRPVF 127
K P D ++ + S +++ S+ ++QI + RPVF
Sbjct: 139 TTKDVVNTTPSDEDESLCAGEFS---------------QDKDSITKRLSDMQICDARPVF 183
Query: 128 DVYLPNRKFKKSCPGDPSFL 147
DVYLPN FKKS PG+PSF+
Sbjct: 184 DVYLPNSHFKKSSPGEPSFV 203
>gi|242051745|ref|XP_002455018.1| hypothetical protein SORBIDRAFT_03g003060 [Sorghum bicolor]
gi|241926993|gb|EES00138.1| hypothetical protein SORBIDRAFT_03g003060 [Sorghum bicolor]
Length = 254
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/137 (43%), Positives = 80/137 (58%), Gaps = 15/137 (10%)
Query: 14 FLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWI 73
FLAEIGAL LL + D + ++ IYEK+ GCSW+ F+ Y+HLKSLGYIVGR GVPW
Sbjct: 86 FLAEIGALILLSDKDETIGIEGIYEKLVGGNFGCSWDTFQAYKHLKSLGYIVGRFGVPWT 145
Query: 74 VKIPKGRDINITSDPVSLQVTPKRHGVMDVEPKEESSLVALFYNIQINEVRPVFDVYLPN 133
+K D + + ++ + + L +QI+ + P F+VYLPN
Sbjct: 146 MKHSGTCDTDQS---------------LNRAGGASNDITKLLKEMQIDGITPSFEVYLPN 190
Query: 134 RKFKKSCPGDPSFLLYL 150
KFKKS PG P+FLL L
Sbjct: 191 SKFKKSSPGSPTFLLCL 207
>gi|79386899|ref|NP_186886.2| uncharacterized protein [Arabidopsis thaliana]
gi|332640277|gb|AEE73798.1| uncharacterized protein [Arabidopsis thaliana]
Length = 161
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 83/135 (61%), Gaps = 11/135 (8%)
Query: 14 FLAEIGALYLL-DNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPW 72
+L+EIG L LL D +D+ + LK++Y +IA K GC WE +EVYR+LK LGYI+GRHGVPW
Sbjct: 32 YLSEIGELQLLGDEDDVVISLKDLYGEIAEGKYGCCWENYEVYRYLKGLGYILGRHGVPW 91
Query: 73 IVKIPKGRDINITSDPVSLQVTPKRHGVMDVEPKEESSLVALFYNIQINEVRPVFDVYLP 132
K +N T + ++ S+ L ++ I + RPVFDVYLP
Sbjct: 92 TTKYA----VNTTPSDEDESLCAAEF------FQDRDSVTKLLSDMHICDARPVFDVYLP 141
Query: 133 NRKFKKSCPGDPSFL 147
N +FKKS PG+PSF+
Sbjct: 142 NSQFKKSSPGEPSFV 156
>gi|334185029|ref|NP_001189791.1| uncharacterized protein [Arabidopsis thaliana]
gi|332640278|gb|AEE73799.1| uncharacterized protein [Arabidopsis thaliana]
Length = 197
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 83/135 (61%), Gaps = 11/135 (8%)
Query: 14 FLAEIGALYLL-DNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPW 72
+L+EIG L LL D +D+ + LK++Y +IA K GC WE +EVYR+LK LGYI+GRHGVPW
Sbjct: 32 YLSEIGELQLLGDEDDVVISLKDLYGEIAEGKYGCCWENYEVYRYLKGLGYILGRHGVPW 91
Query: 73 IVKIPKGRDINITSDPVSLQVTPKRHGVMDVEPKEESSLVALFYNIQINEVRPVFDVYLP 132
K +N T + ++ S+ L ++ I + RPVFDVYLP
Sbjct: 92 TTKYA----VNTTPSDEDESLCAAEF------FQDRDSVTKLLSDMHICDARPVFDVYLP 141
Query: 133 NRKFKKSCPGDPSFL 147
N +FKKS PG+PSF+
Sbjct: 142 NSQFKKSSPGEPSFV 156
>gi|10092177|gb|AAG12596.1|AC068900_2 hypothetical protein; 15019-15869 [Arabidopsis thaliana]
Length = 213
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 83/135 (61%), Gaps = 11/135 (8%)
Query: 14 FLAEIGALYLL-DNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPW 72
+L+EIG L LL D +D+ + LK++Y +IA K GC WE +EVYR+LK LGYI+GRHGVPW
Sbjct: 84 YLSEIGELQLLGDEDDVVISLKDLYGEIAEGKYGCCWENYEVYRYLKGLGYILGRHGVPW 143
Query: 73 IVKIPKGRDINITSDPVSLQVTPKRHGVMDVEPKEESSLVALFYNIQINEVRPVFDVYLP 132
K +N T + ++ S+ L ++ I + RPVFDVYLP
Sbjct: 144 TTKYA----VNTTPSDEDESLCAAEF------FQDRDSVTKLLSDMHICDARPVFDVYLP 193
Query: 133 NRKFKKSCPGDPSFL 147
N +FKKS PG+PSF+
Sbjct: 194 NSQFKKSSPGEPSFV 208
>gi|242045232|ref|XP_002460487.1| hypothetical protein SORBIDRAFT_02g029155 [Sorghum bicolor]
gi|241923864|gb|EER97008.1| hypothetical protein SORBIDRAFT_02g029155 [Sorghum bicolor]
Length = 240
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/137 (43%), Positives = 82/137 (59%), Gaps = 11/137 (8%)
Query: 14 FLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWI 73
FLAE GAL LL + D + ++ IYEK+A GCSW+ F+ Y+ LKSLGYIVGR GVPW
Sbjct: 68 FLAERGALILLSDKDETIGIEGIYEKLAGGNYGCSWDTFQAYKQLKSLGYIVGRFGVPWT 127
Query: 74 VKIPKGRDINITSDPVSLQVTPKRHGVMDVEPKEESSLVALFYNIQINEVRPVFDVYLPN 133
+K T D ++ Q+ +++++ + +QI+ + P F+VYLPN
Sbjct: 128 MKHGS------TCDTIAPQMN-----ILEIDQSLNKTTEWSLKEMQIDGISPFFEVYLPN 176
Query: 134 RKFKKSCPGDPSFLLYL 150
KFKKS G PSFLL L
Sbjct: 177 SKFKKSSAGSPSFLLCL 193
>gi|326530256|dbj|BAJ97554.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 270
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 81/139 (58%), Gaps = 9/139 (6%)
Query: 14 FLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWI 73
FLAE GAL LD+ + ++EIY KIA K GCSW+ F+ Y+HLK LGYI+GR+GVPW
Sbjct: 92 FLAERGALIFLDDEGGTIGMEEIYGKIAGGKYGCSWDAFQAYKHLKLLGYIIGRYGVPWT 151
Query: 74 VK-IPKGRDIN-ITSDPVSLQVTPKRHGVMDVEPKEESSLVALFYNIQINEVRPVFDVYL 131
K P N + P + Q + GV + PK L + + + P ++VYL
Sbjct: 152 TKHSPTCETTNCLEGMPGTEQSFDRATGVHNGIPK-------LLNEVHTDGLSPSYEVYL 204
Query: 132 PNRKFKKSCPGDPSFLLYL 150
PN KF+KS PG P FLL +
Sbjct: 205 PNSKFRKSSPGAPCFLLSM 223
>gi|356523131|ref|XP_003530195.1| PREDICTED: uncharacterized protein LOC100799269 [Glycine max]
Length = 330
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 68/102 (66%), Gaps = 5/102 (4%)
Query: 14 FLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWI 73
+L E+GAL ++DN+ + L E+YEK+A+ KSGC WELFEVYRHLKSLGYI+GRHGV W
Sbjct: 87 YLMELGALDIVDNDGRSISLTEMYEKVASGKSGCCWELFEVYRHLKSLGYIIGRHGVAWS 146
Query: 74 VKIPKGRDINITSDPVSLQVTPKRHGVMDVEPKEESSLVALF 115
+K I + +++VT + + D + K E S+ L+
Sbjct: 147 LK-----SIKSSHKAAAVEVTEESKQLEDTDSKSELSINKLW 183
>gi|297739629|emb|CBI29811.3| unnamed protein product [Vitis vinifera]
Length = 230
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 47/57 (82%)
Query: 14 FLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGV 70
F+AE GAL+LLD+N++ + LK IY+K+A K GC WE FEVYRHLKSLGYIVG HG+
Sbjct: 160 FVAEQGALHLLDDNNVTISLKGIYDKVAQGKCGCFWESFEVYRHLKSLGYIVGPHGI 216
>gi|168030362|ref|XP_001767692.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681012|gb|EDQ67443.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 219
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 73/146 (50%), Gaps = 18/146 (12%)
Query: 14 FLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWI 73
F+ E G+L LL + + L E Y ++ GCSW ++VY +LK LGYIVGRH VPW
Sbjct: 42 FMVEQGSL-LLREGERVVDLLEAYSLVSTPSYGCSWNNYQVYSYLKKLGYIVGRHNVPWT 100
Query: 74 VK-----IPKGRDINIT-SDPVSLQVTPKRHGVMDVEPKEESSLVALFYNIQINEVRPVF 127
V +P + N S V + P +++ E SS + L Y
Sbjct: 101 VSKKRPPMPADEETNTACSQLVDSKSAPGFEVNTELQGSESSSEMKLMY----------- 149
Query: 128 DVYLPNRKFKKSCPGDPSFLLYLTCK 153
DV+LPN +FKKS PG P+F L T
Sbjct: 150 DVHLPNARFKKSNPGLPAFSLCTTSS 175
>gi|6735315|emb|CAB68142.1| hypothetical protein [Arabidopsis thaliana]
Length = 240
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 33/138 (23%)
Query: 14 FLAEIGALYLLDN-NDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPW 72
+L+EIG L +L N +D+ +PLK++YEKIA EKS +LG RHGV W
Sbjct: 83 YLSEIGELQILGNEDDIVIPLKDLYEKIAEEKS-------------VALGKTT-RHGVSW 128
Query: 73 IVKI---PKGRDINITSDPVSLQVTPKRHGVMDVEPKEESSLVALFYNIQINEVRPVFDV 129
+K P G + + + P + ++ L ++QI + + VFDV
Sbjct: 129 TLKDAARPNGEEESACAGEC---------------PADNDTVTKLLGDMQICDAKAVFDV 173
Query: 130 YLPNRKFKKSCPGDPSFL 147
YLPN +FKKS PG+PSF+
Sbjct: 174 YLPNSRFKKSSPGEPSFV 191
>gi|302756839|ref|XP_002961843.1| hypothetical protein SELMODRAFT_76410 [Selaginella moellendorffii]
gi|300170502|gb|EFJ37103.1| hypothetical protein SELMODRAFT_76410 [Selaginella moellendorffii]
Length = 196
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 65/135 (48%), Gaps = 31/135 (22%)
Query: 14 FLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWI 73
+L E G L +L + L E+ E + EK+GCS + + VY H K+LGY+V RH V W
Sbjct: 46 YLVEQGCL-ILTLQGRTMDLHEVLELLGVEKNGCSMDAYNVYSHFKALGYVVSRHNVDWT 104
Query: 74 VKIPKGRDINITSDPVSLQVTPKRHGVMDVEPKEESSLVALFYNIQINEVRPVFDVYLPN 133
K +P S+ D E + SS + ++ VFDVY PN
Sbjct: 105 AK----------EEPESI----------DRERDDHSS----------SSLKLVFDVYAPN 134
Query: 134 RKFKKSCPGDPSFLL 148
+F+K+ PG P F L
Sbjct: 135 SQFRKTSPGVPLFSL 149
>gi|302798096|ref|XP_002980808.1| hypothetical protein SELMODRAFT_113329 [Selaginella moellendorffii]
gi|300151347|gb|EFJ17993.1| hypothetical protein SELMODRAFT_113329 [Selaginella moellendorffii]
Length = 197
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 63/135 (46%), Gaps = 30/135 (22%)
Query: 14 FLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWI 73
+L E G L +L + L E+ E + EK+GCS + + VY H K+LGY+V RH V W
Sbjct: 46 YLVEQGCL-VLTLQGRTMDLHEVLELLGVEKNGCSMDAYNVYSHFKALGYVVSRHNVDWT 104
Query: 74 VKIPKGRDINITSDPVSLQVTPKRHGVMDVEPKEESSLVALFYNIQINEVRPVFDVYLPN 133
K + +D E + SS +L + VFDVY PN
Sbjct: 105 AK--------------------EELESIDRERDDHSSSSSL---------KLVFDVYAPN 135
Query: 134 RKFKKSCPGDPSFLL 148
+F+K+ PG P F L
Sbjct: 136 SQFRKTSPGVPLFSL 150
>gi|308813556|ref|XP_003084084.1| Predicted tRNA-splicing endonuclease subunit (ISS) [Ostreococcus
tauri]
gi|116055967|emb|CAL58500.1| Predicted tRNA-splicing endonuclease subunit (ISS) [Ostreococcus
tauri]
Length = 323
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 67/192 (34%), Gaps = 55/192 (28%)
Query: 12 CRFLAEIG--ALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHG 69
C FL E AL+ + + C ++ +Y +A ++G WE + Y HL+ LGY R G
Sbjct: 93 CAFLCETERLALFFDEREEECASVRAVYALMA--RTGVGWEEYLAYAHLRRLGYGCRRFG 150
Query: 70 VPWIVKIPKGRDINITSDPVS---------------LQVTP------KRHGV-------- 100
W V D + + ++V P KR V
Sbjct: 151 SAWTVDARSSDDWAKETGGIGRWGDGENGDGVKTGEVEVEPIAEPPVKRRRVEETRKKQR 210
Query: 101 ----------------------MDVEPKEESSLVALFYNIQINEVRPVFDVYLPNRKFKK 138
+D + + AL Y+ E R F VY PNR F K
Sbjct: 211 DLPSRRWWLAAGDDAHDWIGPEIDAAARARTESHALEYDESPVEARLTFQVYQPNRHFSK 270
Query: 139 SCPGDPSFLLYL 150
P SF +Y+
Sbjct: 271 KSPDPVSFYVYV 282
>gi|297739628|emb|CBI29810.3| unnamed protein product [Vitis vinifera]
Length = 64
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 33/48 (68%)
Query: 104 EPKEESSLVALFYNIQINEVRPVFDVYLPNRKFKKSCPGDPSFLLYLT 151
E K++ S++ L N+ I +V+ VFDVYLPN KF+KS GDPS ++
Sbjct: 5 ESKDKISIIELVNNVHITKVKLVFDVYLPNSKFRKSFSGDPSIPYFIN 52
>gi|145355706|ref|XP_001422092.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582332|gb|ABP00409.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 334
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 78/199 (39%), Gaps = 59/199 (29%)
Query: 12 CRFLAEIG--ALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHG 69
C FL E AL+ + ++ C ++ +Y +A + G S E + Y H+ LGY+ R G
Sbjct: 100 CAFLVETERLALFFSEKDERCASVRAVYRLMA--RVGVSREAYLAYAHVCRLGYVCRRFG 157
Query: 70 VPWIV--------------------KIPKGRDINITSD----------PVSLQV--TPKR 97
W + + +G D + D P + ++ TP++
Sbjct: 158 SAWTMEARASDADLVAATEGLGIWKRAREGEDGAVDDDRDAVKRRKIAPSTREIKKTPRQ 217
Query: 98 H-----------GVMDVE---PKEESSLVA---------LFYNIQINEVRPVFDVYLPNR 134
G ++ E P+ ++++ A L Y+ V P F VY PNR
Sbjct: 218 RELQSRRWWFASGAIEHEWIGPEIDAAIEANAKPPYAMTLEYDETPVRVAPTFQVYQPNR 277
Query: 135 KFKKSCPGDPSFLLYLTCK 153
F K P SF LY+ +
Sbjct: 278 NFSKKSPDPVSFYLYVASE 296
>gi|395532927|ref|XP_003768516.1| PREDICTED: tRNA-splicing endonuclease subunit Sen54 [Sarcophilus
harrisii]
Length = 542
Score = 39.3 bits (90), Expect = 0.58, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 14 FLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWI 73
+L E G++ L DL L ++E YE + + + S+ ++V+ HLK LGY+V R P +
Sbjct: 125 YLLECGSIQLF-YQDLPLSIQEAYEMLLAQGTR-SFLQYQVFSHLKRLGYVVRRFQ-PGL 181
Query: 74 VKIPKGRDINITS 86
V+ P R +N+ S
Sbjct: 182 VQSPYERQLNLES 194
>gi|449479344|ref|XP_002190299.2| PREDICTED: tRNA-splicing endonuclease subunit Sen54 [Taeniopygia
guttata]
Length = 459
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 14 FLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWI 73
+L E G++ L D+ L ++E YE + +++ S ++V+ HLK LGYIV R P
Sbjct: 53 YLLECGSVQLF-YRDVALSIQEAYETLLCQEA-MSLSHYQVFSHLKQLGYIVLRFD-PST 109
Query: 74 VKIPKGRDINITS 86
V P R +N+ S
Sbjct: 110 VPSPYERQLNLES 122
>gi|19114394|ref|NP_593482.1| exonuclease II Exo2 [Schizosaccharomyces pombe 972h-]
gi|729456|sp|P40383.1|XRN1_SCHPO RecName: Full=5'-3' exoribonuclease 1; AltName: Full=Exonuclease 2;
AltName: Full=Exonuclease II; Short=Exo II; AltName:
Full=p140
gi|531022|gb|AAB42181.1| deoxyribonuclease [Schizosaccharomyces pombe]
gi|2370486|emb|CAB11514.1| exonuclease II Exo2 [Schizosaccharomyces pombe]
Length = 1328
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 39/91 (42%), Gaps = 7/91 (7%)
Query: 46 GCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQVTPKR--HGVMDV 103
G W LF YR +S G+ H P I + KG D+ I TP R +M V
Sbjct: 525 GLQWVLFYYYRGCQSWGWYYNYHFAPKISDVLKGLDVKIDFK----MGTPFRPFEQLMAV 580
Query: 104 EPKEESSLV-ALFYNIQINEVRPVFDVYLPN 133
P +LV F ++ +N P+ D Y N
Sbjct: 581 LPARSQALVPPCFRDLMVNSESPIIDFYPEN 611
>gi|190686370|gb|ACE84048.1| hypothetical protein CJA_3034 [Cellvibrio japonicus Ueda107]
Length = 3113
Score = 38.1 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 61/139 (43%), Gaps = 24/139 (17%)
Query: 1 MERPTAQLRR----LCRFLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYR 56
++R AQ R+ L + ++E+G + +D IAN K+G S E +
Sbjct: 2265 LQRQLAQTRQAHTNLSKRMSEVGNMDAID--------------IANIKTGFS----ERPQ 2306
Query: 57 HLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQVTPKRHGVMDVEPKEESSLVALFY 116
L + + VK P DI I+ + V ++TP++H ++D P+ + +V
Sbjct: 2307 WLDQPARLFNKTESTETVKNPTDEDIRISREHVEKKITPEQHKILDQNPEHKKQVVQALA 2366
Query: 117 NIQINEVRPVFDVYLPNRK 135
+ + DVYL + K
Sbjct: 2367 EMSARGIN--VDVYLSHYK 2383
>gi|426239267|ref|XP_004013547.1| PREDICTED: tRNA-splicing endonuclease subunit Sen54 [Ovis aries]
Length = 603
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 14 FLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWI 73
+L E G++ L + DL L ++E Y+ + E + ++ ++V+ HLK LGY+V R P
Sbjct: 194 YLLECGSIQLF-HQDLPLSIQEAYQLLLTEDT-VTFLQYQVFSHLKRLGYVVRRFQ-PSS 250
Query: 74 VKIPKGRDINITSDPVSLQ 92
V P R +N+ S L+
Sbjct: 251 VLSPYERQLNLDSGAQCLE 269
>gi|444727836|gb|ELW68314.1| Lethal(2) giant larvae protein like protein 2 [Tupaia chinensis]
Length = 4077
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 14 FLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWI 73
+L E G+L L + DL L ++E Y+ + E + ++ ++V+ HLK LGY+V R P
Sbjct: 103 YLLECGSLQLF-HQDLPLSIQEAYQLLLTEDT-VTFLQYQVFSHLKRLGYVVRRFQ-PSS 159
Query: 74 VKIPKGRDINITSDPVSLQVTPKRHG 99
+ P R +N+ S Q HG
Sbjct: 160 ILSPYERQLNLAG---SAQYLKDGHG 182
>gi|395749454|ref|XP_003778946.1| PREDICTED: LOW QUALITY PROTEIN: tRNA-splicing endonuclease subunit
Sen54 [Pongo abelii]
Length = 622
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 14 FLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWI 73
+L E G+++L + DL L ++E Y+ + + + S+ ++V+ HLK LGY+V R P
Sbjct: 213 YLLECGSIHLF-HQDLPLSIQEAYQLLLTDHT-VSFLQYQVFSHLKRLGYVVRRFQ-PSS 269
Query: 74 VKIPKGRDINITS 86
V P R +N+ +
Sbjct: 270 VLSPYERQLNLDA 282
>gi|441644060|ref|XP_004093265.1| PREDICTED: LOW QUALITY PROTEIN: tRNA-splicing endonuclease subunit
Sen54 [Nomascus leucogenys]
Length = 282
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 14 FLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWI 73
+L E G+++L + DL L ++E Y+ + + + ++ ++V+ HLK LGY+V R P
Sbjct: 62 YLLECGSIHLF-HQDLPLSIQEAYQLLLTDHT-VTFLQYQVFSHLKRLGYVV-RRFQPSS 118
Query: 74 VKIPKGRDINITS 86
V P R +N+ +
Sbjct: 119 VLSPYERQLNLDA 131
>gi|417402385|gb|JAA48042.1| Putative trna-splicing endonuclease subunit sen54 [Desmodus
rotundus]
Length = 531
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 14 FLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWI 73
+L E G++ L DL L ++E Y+ + +E + ++ ++V+ HLK LGY+V R P
Sbjct: 119 YLLECGSIQLF-YQDLPLSIQEAYQLLLSEDT-VTFLQYQVFSHLKRLGYVVRRFQ-PSA 175
Query: 74 VKIPKGRDINITSDPVSLQVTPKRHG 99
+ P R +N+ S S Q + R G
Sbjct: 176 ILSPYERQLNLDS---SAQSSEDRSG 198
>gi|149034954|gb|EDL89674.1| rCG42534, isoform CRA_a [Rattus norvegicus]
Length = 238
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 9/64 (14%)
Query: 5 TAQLRRLCRFLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHL-KSLGY 63
+A R C+F+ + ALY L ++DL PL ++ E I SW +FE RHL K LG+
Sbjct: 172 SASPRFCCQFITSVTALYDLSSDDLIPPL-DLLEMIV------SW-IFEDPRHLGKDLGF 223
Query: 64 IVGR 67
I GR
Sbjct: 224 IRGR 227
>gi|193783579|dbj|BAG53490.1| unnamed protein product [Homo sapiens]
Length = 197
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 14 FLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWI 73
+L E G+++L + DL L ++E Y+ + + + ++ ++V+ HLK LGY+V R P
Sbjct: 18 YLLECGSIHLF-HQDLPLSIQEAYQLLLTDHT-VTFLQYQVFSHLKRLGYVV-RRFQPSS 74
Query: 74 VKIPKGRDINI 84
V P R +N+
Sbjct: 75 VLSPYERQLNL 85
>gi|449283034|gb|EMC89737.1| tRNA-splicing endonuclease subunit Sen54, partial [Columba livia]
Length = 438
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 9/74 (12%)
Query: 20 ALYLLDNN-------DLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPW 72
ALYLL+ DL L ++E YE + ++++ S ++V+ HLK LGYIV R P
Sbjct: 42 ALYLLECGYVQLFYRDLPLSVQEAYEILLSQEA-VSLPHYQVFSHLKQLGYIVLRFD-PS 99
Query: 73 IVKIPKGRDINITS 86
V P R +N+ S
Sbjct: 100 TVPSPYERQLNLES 113
>gi|410981822|ref|XP_003997265.1| PREDICTED: tRNA-splicing endonuclease subunit Sen54 [Felis catus]
Length = 529
Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 14 FLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWI 73
+L E G++ L + DL L ++E Y+ + E + ++ ++V+ HLK LGY+V R P
Sbjct: 117 YLLECGSIQLF-HQDLPLSIQEAYQLLLTEDT-MTFLQYQVFSHLKRLGYVVRRFQ-PSS 173
Query: 74 VKIPKGRDINITSDPVSLQ 92
+ P R +N+ + L+
Sbjct: 174 ILSPYERQLNLDGSALCLE 192
>gi|126308739|ref|XP_001377652.1| PREDICTED: tRNA-splicing endonuclease subunit Sen54 [Monodelphis
domestica]
Length = 549
Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 14 FLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWI 73
+L E G++ L DL L ++E YE + + + + ++V+ HLK LGY+V R P +
Sbjct: 129 YLLECGSIQLF-YQDLPLSIQEAYEMLLTQDT-IGFLQYQVFSHLKRLGYVVRRFQ-PSL 185
Query: 74 VKIPKGRDINITSDPVSLQVTPKRHG 99
V P R +N+ D + + + K HG
Sbjct: 186 VPSPYERQLNL--DCGNSRSSEKWHG 209
>gi|443688487|gb|ELT91160.1| hypothetical protein CAPTEDRAFT_229033 [Capitella teleta]
Length = 461
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 17/24 (70%)
Query: 123 VRPVFDVYLPNRKFKKSCPGDPSF 146
V PVFDV+LPN FKK+ PG P
Sbjct: 382 VSPVFDVHLPNANFKKTNPGTPDL 405
>gi|108389163|ref|NP_083833.1| tRNA-splicing endonuclease subunit Sen54 [Mus musculus]
gi|50401564|sp|Q8C2A2.2|SEN54_MOUSE RecName: Full=tRNA-splicing endonuclease subunit Sen54; AltName:
Full=tRNA-intron endonuclease Sen54
gi|12832975|dbj|BAB22335.1| unnamed protein product [Mus musculus]
Length = 525
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 14 FLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWI 73
+L E G++ L DL L ++E Y+ + E + S+ ++V+ HLK LGY+V R + +
Sbjct: 119 YLLECGSIQLF-YQDLPLSIQEAYQLLLTEDT-LSFLQYQVFSHLKRLGYVVRRFQLSSV 176
Query: 74 VKIPKGRDINI 84
V P R +N+
Sbjct: 177 VS-PYERQLNL 186
>gi|397484493|ref|XP_003813409.1| PREDICTED: tRNA-splicing endonuclease subunit Sen54 [Pan paniscus]
Length = 780
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 14 FLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWI 73
+L E G+++L + DL L ++E Y+ + + + ++ ++V+ HLK LGY+V R P
Sbjct: 374 YLLECGSIHLF-HQDLPLSIQEAYQLLLTDHT-VTFLQYQVFSHLKRLGYVVRRFQ-PSS 430
Query: 74 VKIPKGRDINITSDPVSLQ 92
V P R +N+ + L+
Sbjct: 431 VLSPYERQLNLDASVQHLE 449
>gi|148702576|gb|EDL34523.1| mCG6634, isoform CRA_b [Mus musculus]
Length = 543
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 14 FLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWI 73
+L E G++ L DL L ++E Y+ + E + S+ ++V+ HLK LGY+V R + +
Sbjct: 137 YLLECGSIQLF-YQDLPLSIQEAYQLLLTEDT-LSFLQYQVFSHLKRLGYVVRRFQLSSV 194
Query: 74 VKIPKGRDINI 84
V P R +N+
Sbjct: 195 VS-PYERQLNL 204
>gi|440895191|gb|ELR47452.1| tRNA-splicing endonuclease subunit Sen54, partial [Bos grunniens
mutus]
Length = 454
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 14 FLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWI 73
+L E G++ L + DL L ++E Y+ + E + ++ ++V+ HLK LGY+V R P
Sbjct: 45 YLLECGSIQLF-HQDLPLSIQEAYQLLLTEDT-VTFLQYQVFSHLKRLGYVV-RRFQPSS 101
Query: 74 VKIPKGRDINI 84
V P R +N+
Sbjct: 102 VLSPYERQLNL 112
>gi|148702575|gb|EDL34522.1| mCG6634, isoform CRA_a [Mus musculus]
Length = 483
Score = 36.6 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 14 FLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWI 73
+L E G++ L DL L ++E Y+ + E + S+ ++V+ HLK LGY+V R + +
Sbjct: 116 YLLECGSIQLF-YQDLPLSIQEAYQLLLTEDT-LSFLQYQVFSHLKRLGYVVRRFQLSSV 173
Query: 74 VKIPKGRDINI 84
V P R +N+
Sbjct: 174 VS-PYERQLNL 183
>gi|26354132|dbj|BAC40696.1| unnamed protein product [Mus musculus]
Length = 483
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 14 FLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWI 73
+L E G++ L DL L ++E Y+ + E + S+ ++V+ HLK LGY+V R + +
Sbjct: 116 YLLECGSIQLF-YQDLPLSIQEAYQLLLTEDT-LSFLQYQVFSHLKRLGYVVRRFQLSSV 173
Query: 74 VKIPKGRDINI 84
V P R +N+
Sbjct: 174 VS-PYERQLNL 183
>gi|387763180|ref|NP_001248477.1| tRNA-splicing endonuclease subunit Sen54 [Macaca mulatta]
gi|380789909|gb|AFE66830.1| tRNA-splicing endonuclease subunit Sen54 [Macaca mulatta]
gi|383410101|gb|AFH28264.1| tRNA-splicing endonuclease subunit Sen54 [Macaca mulatta]
Length = 526
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 14 FLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWI 73
+L E G+++L + DL L ++E Y+ + + + ++ ++V+ HLK LGY+V R P
Sbjct: 119 YLLECGSIHLF-HQDLPLSIQEAYQLLLTDDT-VTFLQYQVFSHLKRLGYVVRRFQ-PSS 175
Query: 74 VKIPKGRDINITS 86
V P R +N+ +
Sbjct: 176 VLSPYERQLNLDA 188
>gi|147902427|ref|NP_001086697.1| tRNA splicing endonuclease 54 homolog [Xenopus laevis]
gi|50414822|gb|AAH77322.1| MGC80279 protein [Xenopus laevis]
Length = 517
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 14 FLAEIGALYLLDNNDLCLPLKEIYEKI-ANEKSGCSWELFEVYRHLKSLGYIVGRHGVPW 72
+L E GA+ + D L ++E YE++ N+K ++VY HLK LGYIV R P
Sbjct: 103 YLLECGAVQIF-YRDSPLSVQEAYERLLGNQKFPVL--HYQVYSHLKRLGYIVTRFD-PS 158
Query: 73 IVKIPKGRDINITS 86
V+ P R +N+ S
Sbjct: 159 SVQSPYHRQLNLES 172
>gi|196000656|ref|XP_002110196.1| hypothetical protein TRIADDRAFT_53950 [Trichoplax adhaerens]
gi|190588320|gb|EDV28362.1| hypothetical protein TRIADDRAFT_53950 [Trichoplax adhaerens]
Length = 274
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 58/118 (49%), Gaps = 25/118 (21%)
Query: 52 FEVYRHLKSLGYIVGRHGVPWIVKIPKGR------DINITSD-PVSLQVTPKRHGVMDVE 104
++VY HL LG+IV RH +P K+ K D ++T D P+ L VTP MD E
Sbjct: 116 YQVYCHLLRLGFIVKRH-LPARFKVNKETKSKLQPDHDVTEDYPIPL-VTP-----MDAE 168
Query: 105 PKEES-SLVALFYNIQINEVRPV----------FDVYLPNRKFKKSCPGDPSFLLYLT 151
++ + + + + ++ EV FDVYLPN FKK G P+ + ++
Sbjct: 169 TTDKILNKLQVVKSTKMEEVTTKSGSKMEDTIDFDVYLPNANFKKVNFGLPNIAVKVS 226
>gi|31565520|gb|AAH53643.1| TSEN54 protein [Homo sapiens]
Length = 527
Score = 36.6 bits (83), Expect = 4.0, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 14 FLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWI 73
+L E G+++L + DL L ++E Y+ + + + ++ ++V+ HLK LGY+V R P
Sbjct: 120 YLLECGSIHLF-HQDLPLSIQEAYQLLLTDHT-VTFLQYQVFSHLKRLGYVVRRFQ-PSS 176
Query: 74 VKIPKGRDINITS 86
V P R +N+ +
Sbjct: 177 VLSPYERQLNLDA 189
>gi|317059068|ref|ZP_07923553.1| glutamyl-tRNA(Gln) amidotransferase subunit B [Fusobacterium sp.
3_1_5R]
gi|313684744|gb|EFS21579.1| glutamyl-tRNA(Gln) amidotransferase subunit B [Fusobacterium sp.
3_1_5R]
Length = 483
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 18/143 (12%)
Query: 4 PTAQLRRLCRF-----LAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHL 58
P ++ +L RF L E A L + +L +++ E N KS +W + EV RHL
Sbjct: 297 PESKAEKLVRFTKDYELPEYDAQVLTEEMELADYFEKVVEVSKNPKSSSNWIMTEVLRHL 356
Query: 59 KSLG-----YIVGRHGVPWIVKIPKGRDIN--ITSDPVSLQVTPKRHGVMDVEPK----- 106
K G + + + I+ + + I+ I + +L +T R M V+ K
Sbjct: 357 KETGKEIESFEISAENLGKIICLIDAKTISSKIAKEVFALSLTDSRDPEMIVKEKGLLQV 416
Query: 107 -EESSLVALFYNIQINEVRPVFD 128
+E +++++ + N + V D
Sbjct: 417 SDEGAIISMVEEVLANSTKMVED 439
>gi|426346868|ref|XP_004041091.1| PREDICTED: LOW QUALITY PROTEIN: tRNA-splicing endonuclease subunit
Sen54 [Gorilla gorilla gorilla]
Length = 573
Score = 36.6 bits (83), Expect = 4.0, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 14 FLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWI 73
+L E G+++L + DL L ++E Y+ + + + ++ ++V+ HLK LGY+V R P
Sbjct: 166 YLLECGSIHLF-HQDLPLSIQEAYQLLLTDHT-VTFLQYQVFSHLKRLGYVVRRFQ-PSS 222
Query: 74 VKIPKGRDINITS 86
V P R +N+ +
Sbjct: 223 VLSPYERQLNLDA 235
>gi|355568919|gb|EHH25200.1| hypothetical protein EGK_08980, partial [Macaca mulatta]
gi|355754379|gb|EHH58344.1| hypothetical protein EGM_08170, partial [Macaca fascicularis]
Length = 452
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 14 FLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWI 73
+L E G+++L + DL L ++E Y+ + + + ++ ++V+ HLK LGY+V R P
Sbjct: 45 YLLECGSIHLF-HQDLPLSIQEAYQLLLTDDT-VTFLQYQVFSHLKRLGYVV-RRFQPSS 101
Query: 74 VKIPKGRDINITS 86
V P R +N+ +
Sbjct: 102 VLSPYERQLNLDA 114
>gi|29126915|gb|AAH47793.1| TRNA splicing endonuclease 54 homolog (S. cerevisiae) [Homo
sapiens]
Length = 526
Score = 36.2 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 14 FLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWI 73
+L E G+++L + DL L ++E Y+ + + + ++ ++V+ HLK LGY+V R P
Sbjct: 119 YLLECGSIHLF-HQDLPLSIQEAYQLLLTDHT-VTFLQYQVFSHLKRLGYVVRRFQ-PSS 175
Query: 74 VKIPKGRDINITS 86
V P R +N+ +
Sbjct: 176 VLSPYERQLNLDA 188
>gi|296203185|ref|XP_002748826.1| PREDICTED: tRNA-splicing endonuclease subunit Sen54 [Callithrix
jacchus]
Length = 530
Score = 36.2 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 14 FLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWI 73
+L E G++ L + DL L ++E Y+ + + + ++ ++V+ HLK LGY+V R P
Sbjct: 123 YLLECGSIQLF-HQDLPLSIQEAYQLLLTDDT-VTFLQYQVFSHLKRLGYVVRRFQ-PSS 179
Query: 74 VKIPKGRDINI 84
V P R +N+
Sbjct: 180 VLFPYERQLNL 190
>gi|114670473|ref|XP_001143195.1| PREDICTED: tRNA-splicing endonuclease subunit Sen54 isoform 4 [Pan
troglodytes]
gi|410209566|gb|JAA02002.1| tRNA splicing endonuclease 54 homolog [Pan troglodytes]
gi|410300108|gb|JAA28654.1| tRNA splicing endonuclease 54 homolog [Pan troglodytes]
Length = 526
Score = 36.2 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 14 FLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWI 73
+L E G+++L + DL L ++E Y+ + + + ++ ++V+ HLK LGY+V R P
Sbjct: 119 YLLECGSIHLF-HQDLPLSIQEAYQLLLTDHT-VTFLQYQVFSHLKRLGYVVRRFQ-PSS 175
Query: 74 VKIPKGRDINITS 86
V P R +N+ +
Sbjct: 176 VLSPYERQLNLDA 188
>gi|108389176|ref|NP_997229.2| tRNA-splicing endonuclease subunit Sen54 [Homo sapiens]
gi|296452961|sp|Q7Z6J9.3|SEN54_HUMAN RecName: Full=tRNA-splicing endonuclease subunit Sen54; AltName:
Full=SEN54 homolog; Short=HsSEN54; AltName:
Full=tRNA-intron endonuclease Sen54
Length = 526
Score = 36.2 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 14 FLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWI 73
+L E G+++L + DL L ++E Y+ + + + ++ ++V+ HLK LGY+V R P
Sbjct: 119 YLLECGSIHLF-HQDLPLSIQEAYQLLLTDHT-VTFLQYQVFSHLKRLGYVVRRFQ-PSS 175
Query: 74 VKIPKGRDINITS 86
V P R +N+ +
Sbjct: 176 VLSPYERQLNLDA 188
>gi|157818699|ref|NP_001103046.1| tRNA-splicing endonuclease subunit Sen54 [Rattus norvegicus]
gi|149054798|gb|EDM06615.1| rCG32786, isoform CRA_b [Rattus norvegicus]
Length = 525
Score = 36.2 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 14 FLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWI 73
+L E G++ L DL L ++E Y+ + E + S+ ++V+ HLK LGY+V R + +
Sbjct: 119 YLLECGSIQLF-YQDLPLSIQEAYQLLLTEDT-LSFLQYQVFSHLKRLGYVVRRFQLSSV 176
Query: 74 VKIPKGRDINI 84
V P R +N+
Sbjct: 177 VS-PYERQLNL 186
>gi|329664214|ref|NP_001192620.1| tRNA-splicing endonuclease subunit Sen54 [Bos taurus]
gi|296476024|tpg|DAA18139.1| TPA: hypothetical protein BOS_19481 [Bos taurus]
Length = 528
Score = 35.8 bits (81), Expect = 6.4, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 14 FLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWI 73
+L E G++ L + DL L ++E Y+ + E + ++ ++V+ HLK LGY+V R P
Sbjct: 119 YLLECGSIQLF-HQDLPLSIQEAYQLLLTEDT-VTFLQYQVFSHLKRLGYVVRRFQ-PSS 175
Query: 74 VKIPKGRDINI 84
V P R +N+
Sbjct: 176 VLSPYERQLNL 186
>gi|345804620|ref|XP_540434.3| PREDICTED: tRNA-splicing endonuclease subunit Sen54 [Canis lupus
familiaris]
Length = 531
Score = 35.4 bits (80), Expect = 7.5, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 14 FLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWI 73
+L E G++ L + DL L ++E Y+ + E + ++ ++V+ HLK LGY+V R P
Sbjct: 119 YLLECGSIQLF-HQDLPLSIQEAYQLLLTEDA-VTFLQYQVFSHLKRLGYVVRRFQ-PGS 175
Query: 74 VKIPKGRDINITSDPVSLQ 92
+ P R +N+ L+
Sbjct: 176 ILSPYERQLNLDGSAQCLE 194
>gi|194216659|ref|XP_001916857.1| PREDICTED: tRNA-splicing endonuclease subunit Sen54-like [Equus
caballus]
Length = 537
Score = 35.4 bits (80), Expect = 7.7, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 14 FLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWI 73
+L E G++ L + DL L ++E Y+ + E + ++ ++V+ HLK LGY+V R P
Sbjct: 126 YLLECGSIQLF-HQDLPLSIQEAYQLLLTEDT-VTFLQYQVFSHLKRLGYVVRRFQ-PSS 182
Query: 74 VKIPKGRDINI 84
+ P R +N+
Sbjct: 183 ILSPYERQLNL 193
>gi|430814593|emb|CCJ28201.1| unnamed protein product [Pneumocystis jirovecii]
Length = 1318
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 42/98 (42%), Gaps = 3/98 (3%)
Query: 34 KEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKIPKGRDINITSDPVSLQV 93
K++ E N G W LF YR + S + H P + I KG N+ S +
Sbjct: 494 KKLKEMAENYIEGLQWVLFYYYRGVSSWSWFYKYHYSPKVSDIKKGFAANL-SFTLGTPF 552
Query: 94 TPKRHGVMDVEPKEESSLVAL-FYNIQINEVRPVFDVY 130
P +M V P+ LV F ++ +NE P+ D Y
Sbjct: 553 KPFEQ-LMAVLPERSKKLVPKPFADLMVNETSPIRDFY 589
>gi|431908774|gb|ELK12366.1| tRNA-splicing endonuclease subunit Sen54 [Pteropus alecto]
Length = 497
Score = 35.4 bits (80), Expect = 8.4, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 14 FLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWI 73
+L E G++ L + DL L ++E Y+ + E + ++ ++V+ HLK LGY+V R I
Sbjct: 119 YLLECGSIQLF-HQDLPLSIQEAYQLLLTEDT-VTFLQYQVFSHLKRLGYVVRRFQPRSI 176
Query: 74 VKIPKG 79
K P+
Sbjct: 177 NKKPRA 182
>gi|327265017|ref|XP_003217305.1| PREDICTED: tRNA-splicing endonuclease subunit Sen54-like [Anolis
carolinensis]
Length = 554
Score = 35.0 bits (79), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 14 FLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGR 67
+L E G++ L DL L ++E YE + +KS S ++V+ HLK LGYIV R
Sbjct: 135 YLLECGSIQLF-YKDLPLSIQEAYENLLTQKS-MSLLKYQVFCHLKRLGYIVLR 186
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.142 0.442
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,567,066,644
Number of Sequences: 23463169
Number of extensions: 102626104
Number of successful extensions: 190147
Number of sequences better than 100.0: 81
Number of HSP's better than 100.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 47
Number of HSP's that attempted gapping in prelim test: 190073
Number of HSP's gapped (non-prelim): 88
length of query: 155
length of database: 8,064,228,071
effective HSP length: 117
effective length of query: 38
effective length of database: 9,614,004,594
effective search space: 365332174572
effective search space used: 365332174572
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 71 (32.0 bits)