Query 031689
Match_columns 155
No_of_seqs 130 out of 191
Neff 5.0
Searched_HMMs 29240
Date Mon Mar 25 05:49:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031689.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031689hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iey_A TRNA-splicing endonucle 99.6 1.5E-16 5.2E-21 123.8 -0.4 69 6-76 16-87 (154)
2 2zyz_B TRNA-splicing endonucle 99.5 2.9E-15 1E-19 118.6 2.5 73 3-76 46-121 (183)
3 2cv8_A TRNA-splicing endonucle 99.5 7.6E-15 2.6E-19 116.0 2.1 72 3-76 44-118 (180)
4 1a79_A TRNA endonuclease; 2.28 99.4 1.9E-14 6.4E-19 112.9 2.5 71 4-75 34-107 (171)
5 3ajv_B TRNA-splicing endonucle 99.4 3.8E-14 1.3E-18 112.8 1.8 71 4-76 53-126 (186)
6 3iey_B NEQ261; protein heterod 99.0 6.9E-12 2.4E-16 97.4 -3.0 67 6-76 22-88 (153)
7 2ohc_A TRNA-splicing endonucle 99.0 4.2E-11 1.4E-15 101.4 1.5 59 6-76 37-95 (289)
8 4fz2_A TRNA intron endonucleas 98.9 2.3E-10 7.9E-15 100.5 1.9 65 6-76 170-237 (395)
9 1r0v_A ENDA, tRNA-intron endon 98.9 1.7E-10 5.9E-15 98.2 1.0 65 6-76 180-247 (305)
10 3ajv_A Putative uncharacterize 98.9 2.1E-10 7.1E-15 92.2 1.3 63 7-75 67-130 (190)
11 4fz2_A TRNA intron endonucleas 98.4 8.3E-08 2.9E-12 84.3 1.7 63 6-70 39-101 (395)
12 1r0v_A ENDA, tRNA-intron endon 98.2 6.2E-08 2.1E-12 82.4 -3.2 61 6-75 29-89 (305)
13 2ohc_A TRNA-splicing endonucle 97.7 4.1E-06 1.4E-10 70.9 0.1 25 52-76 203-230 (289)
14 2zyz_A Putative uncharacterize 93.0 0.01 3.4E-07 43.9 -1.3 21 47-67 21-41 (116)
15 1w4t_A Arylamine N-acetyltrans 43.7 1.8 6.1E-05 35.9 -2.7 41 27-67 71-113 (299)
16 2ija_A Arylamine N-acetyltrans 43.1 1.8 6.3E-05 35.6 -2.7 43 26-68 50-94 (295)
17 3d9w_A Putative acetyltransfer 39.6 2.3 7.9E-05 35.1 -2.6 42 27-68 60-103 (293)
18 1w5r_A Arylamine N-acetyltrans 39.2 2 7E-05 35.1 -3.0 42 27-68 50-94 (278)
19 2bsz_A Arylamine N-acetyltrans 38.9 2.1 7.1E-05 35.1 -3.0 42 27-68 51-94 (278)
20 2vfb_A Arylamine N-acetyltrans 37.7 2.2 7.6E-05 34.9 -3.0 42 27-68 47-91 (280)
21 3lnb_A N-acetyltransferase fam 32.3 3.3 0.00011 34.7 -2.8 42 27-68 77-120 (309)
22 2p5k_A Arginine repressor; DNA 32.2 15 0.00052 22.1 1.0 34 29-64 18-51 (64)
23 1e2t_A NAT, N-hydroxyarylamine 32.1 2 6.9E-05 35.2 -4.1 42 27-68 50-93 (284)
No 1
>3iey_A TRNA-splicing endonuclease; protein heterodimer, endonuclease, hydrolase, nuclease, tRNA processing, hydrolase-RNA binding protein complex; 2.11A {Nanoarchaeum equitans}
Probab=99.57 E-value=1.5e-16 Score=123.76 Aligned_cols=69 Identities=20% Similarity=0.291 Sum_probs=59.5
Q ss_pred chhHHHHHHHHhhCCEEEecCCCcccCHHHHHHHHhcccCCCcceeeeeeccccCccEEee---ecCCCceeec
Q 031689 6 AQLRRLCRFLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVG---RHGVPWIVKI 76 (155)
Q Consensus 6 ~~lpeEaLYL~ErG~L~v~~~~g~~lSlq~~y~~~~~~~~~~~~~~Y~VY~~Lkr~GYIV~---R~g~~~~~~~ 76 (155)
-|.||||+||+|+|+|+|.+ +|.+||++++++.+.+ .+..++.+|.||+|||++||+|+ |||++|.+|.
T Consensus 16 ~Ls~~EA~YL~~~G~L~v~~-~~~~ls~~el~~~~~~-~~~~f~~~y~vY~dLr~rG~~vk~G~KFG~dF~vY~ 87 (154)
T 3iey_A 16 ELPLIEAYYLLDKGELEVYE-DDKKLSKEEFLKKCLT-YDERFLIRYKAYKELRDKGYTLGTALKFGADFRVYD 87 (154)
T ss_dssp CEEHHHHHHHHHHTSCCCCS-CCC----HHHHHHHHH-HCTTHHHHHHHHHHHHHTTCEEEEEGGGTEEEEEEC
T ss_pred EEcHHHHHHHHHCCCEEEEE-CCCcCCHHHHHHHHHh-cCccHHHHHHHHHHHHHCCcEECCCCccCceEEEEC
Confidence 47899999999999999975 6789999999999875 46789999999999999999999 9999999994
No 2
>2zyz_B TRNA-splicing endonuclease; crenarchaea, heterotetramer, RNA PROC endonuclease, hydrolase, tRNA processing; 1.70A {Pyrobaculum aerophilum}
Probab=99.51 E-value=2.9e-15 Score=118.62 Aligned_cols=73 Identities=21% Similarity=0.293 Sum_probs=66.6
Q ss_pred CCcchhHHHHHHHHhhCCEEEecCCCcccCHHHHHHHHhcccCCCcceeeeeeccccCccEEee---ecCCCceeec
Q 031689 3 RPTAQLRRLCRFLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVG---RHGVPWIVKI 76 (155)
Q Consensus 3 ~~~~~lpeEaLYL~ErG~L~v~~~~g~~lSlq~~y~~~~~~~~~~~~~~Y~VY~~Lkr~GYIV~---R~g~~~~~~~ 76 (155)
.|-.|.||||+||+|+|.|+|.+++|.+||++++++.+.. .++.++.+|.||+|||++||+|+ |||++|.+|.
T Consensus 46 ~~L~Ls~eEa~yL~~~g~l~v~d~~~~~ls~~el~~~~~~-~~~~f~~~y~vy~~lr~~G~~v~~G~kfG~df~vY~ 121 (183)
T 2zyz_B 46 APLILGLYEALYLAEKGRLKVMGEDGREVAPEELAALGRE-RMRNFDEIYKIYKYFRDLGYVVKSGLKFGALFSVYE 121 (183)
T ss_dssp SCEEEEHHHHHHHHHTTSCEEECTTSCEECHHHHHHHHHH-HSTTHHHHHHHHHHHHHTTCEEEECGGGTSSEEEES
T ss_pred ceEEeeHHHHHHHHHCCCEEEECCCCCcCCHHHHHHHHhh-hcccHHHHHHHHHHHHHCCeEeccccccCceEEEEc
Confidence 3567899999999999999999888899999999999764 56789999999999999999999 9999999994
No 3
>2cv8_A TRNA-splicing endonuclease; tRNA-intron endonuclease, structural genomics, NPPSFA; 2.80A {Sulfolobus tokodaii}
Probab=99.48 E-value=7.6e-15 Score=115.99 Aligned_cols=72 Identities=21% Similarity=0.279 Sum_probs=65.1
Q ss_pred CCcchhHHHHHHHHhhCCEEEecCCCcccCHHHHHHHHhcccCCCcceeeeeeccccCccEEee---ecCCCceeec
Q 031689 3 RPTAQLRRLCRFLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVG---RHGVPWIVKI 76 (155)
Q Consensus 3 ~~~~~lpeEaLYL~ErG~L~v~~~~g~~lSlq~~y~~~~~~~~~~~~~~Y~VY~~Lkr~GYIV~---R~g~~~~~~~ 76 (155)
.|-.|.||||+||+|+|.|+|.+ +|.+||++++++.+.. .++.++.+|.||+|||++||+|+ |||++|.+|.
T Consensus 44 ~~L~Ls~eEA~yL~~~g~l~v~d-~~~~ls~~el~~~~~~-~~~~f~~~y~VY~~Lr~~G~~v~~G~kfG~df~vY~ 118 (180)
T 2cv8_A 44 SELILSLIEGVYLVKKGKLEIVS-NGERLDFERLYQIGVT-QIPRFRILYSVYEDLREKGYVVRSGIKYGADFAVYT 118 (180)
T ss_dssp CCEEEEHHHHHHHHHTTSCEEEE-TTEEECHHHHHHHHHH-HSTTHHHHHHHHHHHHHTTCEEEECGGGTSSEEEEC
T ss_pred ceEEEeHHHHHHHHHCCCEEEee-CCCCCCHHHHHHHHhh-hcccHHHHhHHHHHHHhCCeEeccccccCceEEEEc
Confidence 35578999999999999999985 6789999999999775 46789999999999999999999 9999999994
No 4
>1a79_A TRNA endonuclease; 2.28A {Methanocaldococcus jannaschii} SCOP: c.52.2.1 d.75.1.1
Probab=99.45 E-value=1.9e-14 Score=112.90 Aligned_cols=71 Identities=23% Similarity=0.286 Sum_probs=63.2
Q ss_pred CcchhHHHHHHHHhhCCEEEecCCCcccCHHHHHHHHhcccCCCcceeeeeeccccCccEEee---ecCCCceee
Q 031689 4 PTAQLRRLCRFLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVG---RHGVPWIVK 75 (155)
Q Consensus 4 ~~~~lpeEaLYL~ErG~L~v~~~~g~~lSlq~~y~~~~~~~~~~~~~~Y~VY~~Lkr~GYIV~---R~g~~~~~~ 75 (155)
|-.|-|+||+||+++|.|+|.++++.+||++++++.+.. .++.++.+|.||+|||++||+|+ |||++|.+|
T Consensus 34 ~L~Ls~~Ea~yL~~~g~l~v~~~~~~~l~~~el~~~~~~-~~~~f~~~y~VY~dLr~rG~~v~~G~kfG~df~vY 107 (171)
T 1a79_A 34 FLSLSLVEALYLINLGWLEVKYKDNKPLSFEELYEYARN-VEERLCLKYLVYKDLRTRGYIVKTGLKYGADFRLY 107 (171)
T ss_dssp CEEEEHHHHHHHHHHTCEEEECSSSSCCCHHHHHHHHHH-HCTTHHHHHHHHHHHHHTTCEEEECGGGTSSEEEE
T ss_pred eEEEeHHHHHHHHHcCCEEEEeCCCCCCCHHHHHHHHHh-ccccHHHHhHHHHHHHHCCeEecccccCCceEEEE
Confidence 456889999999999999998765556999999999764 45679999999999999999999 999999999
No 5
>3ajv_B TRNA-splicing endonuclease; ENDA, archaea crenarch hydrolase; 1.70A {Aeropyrum pernix} PDB: 3p1z_B
Probab=99.41 E-value=3.8e-14 Score=112.75 Aligned_cols=71 Identities=20% Similarity=0.311 Sum_probs=64.3
Q ss_pred CcchhHHHHHHHHhhCCEEEecCCCcccCHHHHHHHHhcccCCCcceeeeeeccccCccEEee---ecCCCceeec
Q 031689 4 PTAQLRRLCRFLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVG---RHGVPWIVKI 76 (155)
Q Consensus 4 ~~~~lpeEaLYL~ErG~L~v~~~~g~~lSlq~~y~~~~~~~~~~~~~~Y~VY~~Lkr~GYIV~---R~g~~~~~~~ 76 (155)
|-.|-||||+||+++|.|+|.+++|.+||.+++++. . ..+..++.+|.||+|||++||+|+ |||++|.+|.
T Consensus 53 ~L~Ls~~Ea~yL~~~g~l~v~~~~~~~ls~~el~~~-~-~~~~~f~~~y~VY~dLr~rG~~v~~G~kfG~dflvY~ 126 (186)
T 3ajv_B 53 PLRLSLIESLYLAEKGVLEVAKPDGSSVGVEDLRTA-V-RGNPRFSMLYNIYRDLRERGFVVRSGLKFGSDFAVYR 126 (186)
T ss_dssp CEEEEHHHHHHHHHTTSEEEECTTSCEECHHHHHHH-H-HTSHHHHHHHHHHHHHHHTTCEEEECGGGTSSEEEES
T ss_pred eEEEeHHHHHHHHHCCCEEEECCCCCcCCHHHHHHH-h-hccchHHHHhhHHHHHHhCceEeccccccCceEEEEC
Confidence 456889999999999999999877899999999998 3 346679999999999999999999 9999999994
No 6
>3iey_B NEQ261; protein heterodimer, endonuclease, hydrolase, nuclease, tRNA processing, hydrolase-RNA binding protein complex; 2.11A {Nanoarchaeum equitans} PDB: 3if0_X
Probab=99.03 E-value=6.9e-12 Score=97.35 Aligned_cols=67 Identities=19% Similarity=0.124 Sum_probs=59.7
Q ss_pred chhHHHHHHHHhhCCEEEecCCCcccCHHHHHHHHhcccCCCcceeeeeeccccCccEEeeecCCCceeec
Q 031689 6 AQLRRLCRFLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKI 76 (155)
Q Consensus 6 ~~lpeEaLYL~ErG~L~v~~~~g~~lSlq~~y~~~~~~~~~~~~~~Y~VY~~Lkr~GYIV~R~g~~~~~~~ 76 (155)
.|-|+||+||+ +|.|+|. +|.+||++++.+.+.. .+..++.+|.||+|||++||+|+--|++|.+|.
T Consensus 22 ~Ls~~EA~yL~-~g~l~v~--~~~~l~~~~l~~~~~~-~~~~F~~~y~VY~dLR~rG~~vk~GG~DFlvY~ 88 (153)
T 3iey_B 22 KISEPELLFVL-RNKPQIK--DRLKLDEKTIIKEGVK-KYKNFWEIYYTVKDLILRGYRVRFDGFFIELYE 88 (153)
T ss_dssp ECCHHHHHHHH-HHCTHHH--HHHTCCHHHHHHHHHH-HCTTHHHHHHHHHHHHHTTCEEEECSSSEEEEC
T ss_pred EECHHHHHHHh-cCCEEec--cCCcCCHHHHHHHHHh-cCcchhhhhHHHHHHHHCCCEEeeCCCeEEEEc
Confidence 46799999999 9999983 5788999999999764 467899999999999999999997799999994
No 7
>2ohc_A TRNA-splicing endonuclease; intron, hydrolase; 2.50A {Thermoplasma acidophilum} PDB: 2ohe_A
Probab=99.03 E-value=4.2e-11 Score=101.43 Aligned_cols=59 Identities=15% Similarity=0.242 Sum_probs=53.7
Q ss_pred chhHHHHHHHHhhCCEEEecCCCcccCHHHHHHHHhcccCCCcceeeeeeccccCccEEeeecCCCceeec
Q 031689 6 AQLRRLCRFLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVKI 76 (155)
Q Consensus 6 ~~lpeEaLYL~ErG~L~v~~~~g~~lSlq~~y~~~~~~~~~~~~~~Y~VY~~Lkr~GYIV~R~g~~~~~~~ 76 (155)
.|.|+||+||++||.|++. .+||++++++.+ ++.+|.||++||++||.|..-|.+| +++
T Consensus 37 ~L~p~Ea~YLl~rg~l~i~----~~~~~~~~~~~~-------~~~~y~VY~DLr~rG~~v~~~g~dF-vyp 95 (289)
T 2ohc_A 37 ILDPYECLYLYFKGRISFQ----NSDSFRDLFDTV-------TFDRYVAYEILKNKGYRVKEDSGLI-YFR 95 (289)
T ss_dssp ECCHHHHHHHHHTTCEEES----STTHHHHHHHHS-------CHHHHHHHHHHHTTTCEEEEETTEE-EEE
T ss_pred EEcHHHHHHHHhcCCEEEe----cCCCHHHHHHhh-------hhhhEeehhhHHhCCceEeeCCccE-Eee
Confidence 5889999999999999995 368999999873 8999999999999999999999999 884
No 8
>4fz2_A TRNA intron endonuclease; tRNA splicing endonuclease, hydrolase; 2.25A {Candidatus micrarchaeum acidiphilum}
Probab=98.92 E-value=2.3e-10 Score=100.48 Aligned_cols=65 Identities=17% Similarity=0.353 Sum_probs=57.8
Q ss_pred chhHHHHHHHHhhCCEEEecCCCcccCHHHHHHHHhcccCCCcceeeeeeccccCccEEee---ecCCCceeec
Q 031689 6 AQLRRLCRFLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVG---RHGVPWIVKI 76 (155)
Q Consensus 6 ~~lpeEaLYL~ErG~L~v~~~~g~~lSlq~~y~~~~~~~~~~~~~~Y~VY~~Lkr~GYIV~---R~g~~~~~~~ 76 (155)
-|=|+||+||+|+|.|+|.+ +|.+++.+.+.. ....++.+|.||+|||++||||+ |||++|.+|.
T Consensus 170 qLSlvEA~YL~~~G~L~V~~-----~s~~el~~~~~~-~~~~F~~kY~VY~dLR~rG~vvksG~KFG~dFrvY~ 237 (395)
T 4fz2_A 170 KLDIYETLFLIDMGVISIKN-----FTRAQIVNIASA-RRTDIMKLYDVYKDWRTKGYVVKTGFKFGTNFRIYF 237 (395)
T ss_dssp EECHHHHHHHHHTTCEEESS-----CCHHHHHHHHHH-HCTTHHHHHHHHHHHHTTTCEEEEEGGGTEEEEEEC
T ss_pred eecHHHHHHHHhCCCEEeec-----CCHHHHHHHHhh-cchhhhhhhHHHHHHHHCCCEeCcCcccCceEEEee
Confidence 35589999999999999942 889999999764 56789999999999999999999 9999999993
No 9
>1r0v_A ENDA, tRNA-intron endonuclease, intron endonuclease; RNA splicing, X-RAY crystallography, translati hydrolase; 2.00A {Archaeoglobus fulgidus} SCOP: c.52.2.1 c.52.2.1 d.75.1.1 PDB: 1r11_A 1rlv_A 2gjw_A* 3p1y_A
Probab=98.92 E-value=1.7e-10 Score=98.17 Aligned_cols=65 Identities=26% Similarity=0.379 Sum_probs=56.8
Q ss_pred chhHHHHHHHHhhCCEEEecCCCcccCHHHHHHHHhcccCCCcceeeeeeccccCccEEee---ecCCCceeec
Q 031689 6 AQLRRLCRFLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVG---RHGVPWIVKI 76 (155)
Q Consensus 6 ~~lpeEaLYL~ErG~L~v~~~~g~~lSlq~~y~~~~~~~~~~~~~~Y~VY~~Lkr~GYIV~---R~g~~~~~~~ 76 (155)
.|-|+||+||+++|.|+|.+ .|. +++.+.+.. .++.++.+|.||+|||++||+|+ |||++|.+|.
T Consensus 180 ~Lsl~EA~yL~~~g~L~v~~-~~~----~el~~~~~~-~~~~f~~~y~VY~dLR~rG~vvk~G~KFG~DFlvY~ 247 (305)
T 1r0v_A 180 TLSLIESLYLLDLGKLNLLN-ADR----EELVKRARE-VERNFDRRYEVYRNLKERGFVVKTGFKFGSEFRVYR 247 (305)
T ss_dssp EECHHHHHHHHHHTCEEETT-CCH----HHHHHHHHH-HSTTHHHHHHHHHHHHHTTCEEEECGGGTSSEEEES
T ss_pred EEcHHHHHHHHhcCcEEEec-CCH----HHHHHHHhh-cCcchhhhhhHHHHHHHCCCEeccCcccCcEEEEEC
Confidence 46799999999999999964 333 899998664 46789999999999999999998 9999999994
No 10
>3ajv_A Putative uncharacterized protein; ENDA, archaea crenarch hydrolase; 1.70A {Aeropyrum pernix} PDB: 3p1z_A
Probab=98.92 E-value=2.1e-10 Score=92.21 Aligned_cols=63 Identities=21% Similarity=0.041 Sum_probs=52.9
Q ss_pred hhHHHHHHHHhhCCEEEecCCCcccCHHHHHHHHhcccCCCcceeeeeeccccCccEEee-ecCCCceee
Q 031689 7 QLRRLCRFLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVG-RHGVPWIVK 75 (155)
Q Consensus 7 ~lpeEaLYL~ErG~L~v~~~~g~~lSlq~~y~~~~~~~~~~~~~~Y~VY~~Lkr~GYIV~-R~g~~~~~~ 75 (155)
|-|+||+||+++|.|++ +..++++++++.+.. .++++.+|.||+|||++||+|+ -++.++.+|
T Consensus 67 Ls~vEAlYL~~~G~L~v----~~~~~~~eL~~~~~~--~~~f~~kY~VYkDLR~RGy~Vk~G~KfdflVY 130 (190)
T 3ajv_A 67 LEPLEAAYQASRGMLCM----GETRGWAAAVEVIAG--LGLSLDTALVYFDLRRKGRKPLVGVRRGTLVY 130 (190)
T ss_dssp ECHHHHHHHHHHTCEEE----TTBCHHHHHHHHHHH--TTCCHHHHHHHHHHHHTTCCCEECSSTTEEEE
T ss_pred ECHHHHHHHHhcCcEee----cCCCCHHHHHHHHhh--CCCcceEEEeHHHHHhCCCEEeecCCCCeEEE
Confidence 77999999999999987 246899999998653 5689999999999999999998 233357777
No 11
>4fz2_A TRNA intron endonuclease; tRNA splicing endonuclease, hydrolase; 2.25A {Candidatus micrarchaeum acidiphilum}
Probab=98.37 E-value=8.3e-08 Score=84.31 Aligned_cols=63 Identities=11% Similarity=0.142 Sum_probs=54.6
Q ss_pred chhHHHHHHHHhhCCEEEecCCCcccCHHHHHHHHhcccCCCcceeeeeeccccCccEEeeecCC
Q 031689 6 AQLRRLCRFLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGV 70 (155)
Q Consensus 6 ~~lpeEaLYL~ErG~L~v~~~~g~~lSlq~~y~~~~~~~~~~~~~~Y~VY~~Lkr~GYIV~R~g~ 70 (155)
.|=|.||+||+++|.+.+.+.+|..+|++++.+.+.. ...++.+|.||++||++||+|+.-|.
T Consensus 39 ~LS~~EAaYLl~~~krl~vd~~gk~ls~eelle~~~~--~r~f~~kylVYkDLReRG~~Vk~~g~ 101 (395)
T 4fz2_A 39 MLEVEEGLYLVDVRKAACTDENSKPVSFNDIAGVFIK--RKKLMARYFTFKDWRDRGLIIKSPGL 101 (395)
T ss_dssp EECHHHHHHHHHHSCCEEECTTSCBCCHHHHHHHTTT--STTHHHHHHHHHHHHHTTCCEESCCS
T ss_pred EEEehhhhHHHHhCCeeeeccCCCcCCHHHHHHHHHh--chhHHHHHHHHHHHHhcCcccccccc
Confidence 4679999999999998888889999999999998653 35799999999999999999985433
No 12
>1r0v_A ENDA, tRNA-intron endonuclease, intron endonuclease; RNA splicing, X-RAY crystallography, translati hydrolase; 2.00A {Archaeoglobus fulgidus} SCOP: c.52.2.1 c.52.2.1 d.75.1.1 PDB: 1r11_A 1rlv_A 2gjw_A* 3p1y_A
Probab=98.19 E-value=6.2e-08 Score=82.44 Aligned_cols=61 Identities=13% Similarity=0.121 Sum_probs=24.0
Q ss_pred chhHHHHHHHHhhCCEEEecCCCcccCHHHHHHHHhcccCCCcceeeeeeccccCccEEeeecCCCceee
Q 031689 6 AQLRRLCRFLAEIGALYLLDNNDLCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYIVGRHGVPWIVK 75 (155)
Q Consensus 6 ~~lpeEaLYL~ErG~L~v~~~~g~~lSlq~~y~~~~~~~~~~~~~~Y~VY~~Lkr~GYIV~R~g~~~~~~ 75 (155)
.|=|+||+||+++|. ++. ++ | +++.+.+. .+...++.+|.||+|||++||+|+-- .+|.++
T Consensus 29 ~L~~~Ea~YL~~~~~-~i~--~~--~--~~l~~~~~-~~~~~~~~~y~VY~DLR~RGy~v~~g-~df~vy 89 (305)
T 1r0v_A 29 YLHPLEVVYLQIKGI-ESF--GE--L--EDVLSWAE-SRMEDFSTYYFVYEDLRDRGNKVKIQ-GEFLLT 89 (305)
T ss_dssp -----------------------------------------CHHHHHHHHHHHHHTTCCCEEE-TTEEES
T ss_pred EEeHHHHHHHHHcCC-chH--hh--H--HHHHHHHH-hcccchhhheehHHHHHhCCcEeeeC-CcEEEe
Confidence 466999999999999 885 33 3 89998864 45678999999999999999999744 567665
No 13
>2ohc_A TRNA-splicing endonuclease; intron, hydrolase; 2.50A {Thermoplasma acidophilum} PDB: 2ohe_A
Probab=97.75 E-value=4.1e-06 Score=70.87 Aligned_cols=25 Identities=32% Similarity=0.393 Sum_probs=24.1
Q ss_pred eeeeccccCccEEee---ecCCCceeec
Q 031689 52 FEVYRHLKSLGYIVG---RHGVPWIVKI 76 (155)
Q Consensus 52 Y~VY~~Lkr~GYIV~---R~g~~~~~~~ 76 (155)
|.||+|||++||+|+ |||++|.+|.
T Consensus 203 y~VY~dLR~rG~vvk~G~KFG~DFlvY~ 230 (289)
T 2ohc_A 203 DMVYSDLVGRGCIVKTGFKYGANFRVYL 230 (289)
T ss_dssp HHHHHHHHHTTCEEEECGGGTSSEEEES
T ss_pred HHHHHHHHHCCCEEcccccCCceEEEEC
Confidence 999999999999999 9999999994
No 14
>2zyz_A Putative uncharacterized protein PAE0789; crenarchaea, heterotetramer, RNA PROC endonuclease, hydrolase, tRNA processing; 1.70A {Pyrobaculum aerophilum}
Probab=93.04 E-value=0.01 Score=43.94 Aligned_cols=21 Identities=24% Similarity=0.284 Sum_probs=18.6
Q ss_pred CcceeeeeeccccCccEEeee
Q 031689 47 CSWELFEVYRHLKSLGYIVGR 67 (155)
Q Consensus 47 ~~~~~Y~VY~~Lkr~GYIV~R 67 (155)
....+|+||+|||++||+|..
T Consensus 21 ~~~l~y~VYkDLR~RG~~vk~ 41 (116)
T 2zyz_A 21 MDVLQEQVFKDLKSRGFKIIE 41 (116)
T ss_dssp CCHHHHHHHHHHHTTTCEEEE
T ss_pred ccceeeHHHHHHHHCCCcccE
Confidence 456789999999999999996
No 15
>1w4t_A Arylamine N-acetyltransferase; 5- aminosalicylic acid, NAT, xenobiotic metabolism, acyltransferase; 1.95A {Pseudomonas aeruginosa} SCOP: d.3.1.5
Probab=43.67 E-value=1.8 Score=35.95 Aligned_cols=41 Identities=20% Similarity=0.315 Sum_probs=31.7
Q ss_pred CCcccCHHHHHHHHhc-ccCC-CcceeeeeeccccCccEEeee
Q 031689 27 NDLCLPLKEIYEKIAN-EKSG-CSWELFEVYRHLKSLGYIVGR 67 (155)
Q Consensus 27 ~g~~lSlq~~y~~~~~-~~~~-~~~~~Y~VY~~Lkr~GYIV~R 67 (155)
....|+++++++.+.. +++| |+..+-+-+.-|+.+||-|..
T Consensus 71 ~~i~ld~~~l~~KiV~~~RGGyC~ElN~Lf~~~L~~LGF~V~~ 113 (299)
T 1w4t_A 71 RPIEIDADKVFAKVVEGSRGGYCFELNSLFARLLLALGYELEL 113 (299)
T ss_dssp CCCCCSHHHHHHHHTTTTCCBCHHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCCHHHHHHHHHhcCCCcchHhHHHHHHHHHHHcCCeEEE
Confidence 4577999999999973 3455 556666667779999999984
No 16
>2ija_A Arylamine N-acetyltransferase 1; arylamide acetylase 1, structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} PDB: 2pqt_A* 2pfr_A*
Probab=43.14 E-value=1.8 Score=35.57 Aligned_cols=43 Identities=19% Similarity=0.433 Sum_probs=32.1
Q ss_pred CCCcccCHHHHHHHHhc-ccCC-CcceeeeeeccccCccEEeeec
Q 031689 26 NNDLCLPLKEIYEKIAN-EKSG-CSWELFEVYRHLKSLGYIVGRH 68 (155)
Q Consensus 26 ~~g~~lSlq~~y~~~~~-~~~~-~~~~~Y~VY~~Lkr~GYIV~R~ 68 (155)
.....|+++++++.+.. +++| |...+-+-|.-|+.+||-|...
T Consensus 50 g~~i~ld~~~l~~KiV~~~RGGyC~ElN~Lf~~~L~~LGF~V~~~ 94 (295)
T 2ija_A 50 GDAMDLGLEAIFDQVVRRNRGGWCLQVNHLLYWALTTIGFETTML 94 (295)
T ss_dssp TCCCCCSHHHHHHHHHTTCCCBCHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CCCCCCCHHHHHHHHhcCCCcEEhHHHHHHHHHHHHHcCCcEEEE
Confidence 34577999999998873 4555 4556666667799999999843
No 17
>3d9w_A Putative acetyltransferase; arylamine N-acetyltransferase, NAT, X-RAY diffraction, acyltransferase; 2.70A {Nocardia farcinica}
Probab=39.55 E-value=2.3 Score=35.15 Aligned_cols=42 Identities=24% Similarity=0.352 Sum_probs=32.0
Q ss_pred CCcccCHHHHHHHHhc-ccCC-CcceeeeeeccccCccEEeeec
Q 031689 27 NDLCLPLKEIYEKIAN-EKSG-CSWELFEVYRHLKSLGYIVGRH 68 (155)
Q Consensus 27 ~g~~lSlq~~y~~~~~-~~~~-~~~~~Y~VY~~Lkr~GYIV~R~ 68 (155)
....|+++++++.+.. +++| |+..+-+-+.-|+.+||-|...
T Consensus 60 ~~i~Ld~~~l~~KiV~~~RGGyC~ElN~Lf~~~L~~LGF~V~~~ 103 (293)
T 3d9w_A 60 RPVRLDLATLQDKLVHSRRGGYCYENAGLFAAALERLGFGVTGH 103 (293)
T ss_dssp CCCCCSHHHHHHHHTSSSCCBCHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCCHHHHHHHHHHcCCCcChHHHHHHHHHHHHHcCCeEEEE
Confidence 4567999999998774 4555 5666777777799999999843
No 18
>1w5r_A Arylamine N-acetyltransferase; acyltransferase; 1.45A {Mycobacterium smegmatis} SCOP: d.3.1.5 PDB: 1w6f_A* 1gx3_A
Probab=39.25 E-value=2 Score=35.10 Aligned_cols=42 Identities=19% Similarity=0.196 Sum_probs=31.4
Q ss_pred CCc-ccCHHHHHHHHhc-ccCC-CcceeeeeeccccCccEEeeec
Q 031689 27 NDL-CLPLKEIYEKIAN-EKSG-CSWELFEVYRHLKSLGYIVGRH 68 (155)
Q Consensus 27 ~g~-~lSlq~~y~~~~~-~~~~-~~~~~Y~VY~~Lkr~GYIV~R~ 68 (155)
... .|+++++++.+.. +++| |...+-+-+.-|+.+||-|...
T Consensus 50 ~~i~~ld~~~l~~KiV~~~RGGyC~ElN~Lf~~~L~~LGF~V~~~ 94 (278)
T 1w5r_A 50 IPVADLSAEALFAKLVDRRRGGYQYEHNGLLGYVLEELGFEVERL 94 (278)
T ss_dssp CCCCCCSHHHHHHHHTTTCCCBCHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CCCCCCCHHHHHHHHhcCCCceehHHHHHHHHHHHHHcCCeEEEE
Confidence 356 7899999999873 4555 4556666666799999999843
No 19
>2bsz_A Arylamine N-acetyltransferase 1; acyltransferase, complete proteome; 2.0A {Rhizobium loti} SCOP: d.3.1.5
Probab=38.91 E-value=2.1 Score=35.09 Aligned_cols=42 Identities=29% Similarity=0.415 Sum_probs=32.0
Q ss_pred CCcccCHHHHHHHHhc-ccCC-CcceeeeeeccccCccEEeeec
Q 031689 27 NDLCLPLKEIYEKIAN-EKSG-CSWELFEVYRHLKSLGYIVGRH 68 (155)
Q Consensus 27 ~g~~lSlq~~y~~~~~-~~~~-~~~~~Y~VY~~Lkr~GYIV~R~ 68 (155)
....|+++++++.+.. +++| |...+-+-+.-|+.+||-|...
T Consensus 51 ~~i~ld~~~l~~KiV~~~RGGyC~ElN~Lf~~~L~~LGF~V~~~ 94 (278)
T 2bsz_A 51 RPVRLDLAALQDKIVLGGRGGYCFEHNLLFMHALKALGFEVGGL 94 (278)
T ss_dssp CCCCCSHHHHHHHHTTSCCCBCHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CCCCCCHHHHHHHHHhCCCCeehHHHHHHHHHHHHHCCCeEEEE
Confidence 4578999999999874 3555 4556666666799999999843
No 20
>2vfb_A Arylamine N-acetyltransferase; NAT, acetyl COA, mycobacteria, actyltransferase; 2.00A {Mycobacterium marinum} PDB: 2vfc_A* 3ltw_A*
Probab=37.68 E-value=2.2 Score=34.90 Aligned_cols=42 Identities=24% Similarity=0.294 Sum_probs=31.4
Q ss_pred CCc-ccCHHHHHHHHhc-ccCC-CcceeeeeeccccCccEEeeec
Q 031689 27 NDL-CLPLKEIYEKIAN-EKSG-CSWELFEVYRHLKSLGYIVGRH 68 (155)
Q Consensus 27 ~g~-~lSlq~~y~~~~~-~~~~-~~~~~Y~VY~~Lkr~GYIV~R~ 68 (155)
... .|+++++++.+.. +++| |...+-+-+.-|+.+||-|...
T Consensus 47 ~~i~~ld~~~l~~KiV~~~RGGyC~ElN~Lf~~~L~~LGF~V~~~ 91 (280)
T 2vfb_A 47 VPVDDLSAEALADKLVDRRRGGYCYEHNGLIGYVLAELGYRVRRL 91 (280)
T ss_dssp CCCCCCSHHHHHHHHTTTCCCBCHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CCCCCCCHHHHHHHHhcCCCceEhHHHHHHHHHHHHHCCCeEEEE
Confidence 345 7899999999873 4555 4556666666799999999843
No 21
>3lnb_A N-acetyltransferase family protein; arylamine N-acetyltransferase, NAT, acetyltrans acyltransferase; HET: COA; 2.01A {Bacillus anthracis}
Probab=32.31 E-value=3.3 Score=34.73 Aligned_cols=42 Identities=19% Similarity=0.215 Sum_probs=32.2
Q ss_pred CCcccCHHHHHHHHhc-ccCC-CcceeeeeeccccCccEEeeec
Q 031689 27 NDLCLPLKEIYEKIAN-EKSG-CSWELFEVYRHLKSLGYIVGRH 68 (155)
Q Consensus 27 ~g~~lSlq~~y~~~~~-~~~~-~~~~~Y~VY~~Lkr~GYIV~R~ 68 (155)
....|+++++++.+.. +++| |...+.+-+.-|+.+||-|...
T Consensus 77 ~~~~ld~~~l~~KiV~~~RGGyC~ElN~lf~~~L~~lGf~v~~~ 120 (309)
T 3lnb_A 77 TIKNISKNNLVEKLLIQKRGGLCYELNSLLYYFLMDCGFQVYKV 120 (309)
T ss_dssp CCCCCCHHHHHHHHTTTCCCBCHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCCHHHHHHHHHHcCCCcchHHHHHHHHHHHHHcCCeEEEE
Confidence 3467999999999873 3445 5666777777799999999844
No 22
>2p5k_A Arginine repressor; DNA-binding domain, winged helix-turn-helix (WHTH), DNA binding protein; 1.00A {Bacillus subtilis} SCOP: a.4.5.3 PDB: 2p5l_C*
Probab=32.17 E-value=15 Score=22.12 Aligned_cols=34 Identities=18% Similarity=0.203 Sum_probs=26.2
Q ss_pred cccCHHHHHHHHhcccCCCcceeeeeeccccCccEE
Q 031689 29 LCLPLKEIYEKIANEKSGCSWELFEVYRHLKSLGYI 64 (155)
Q Consensus 29 ~~lSlq~~y~~~~~~~~~~~~~~Y~VY~~Lkr~GYI 64 (155)
..+|.+|+++.+.. .+.....=.||++|+.+|.+
T Consensus 18 ~~~t~~el~~~l~~--~~~~vs~~Tv~R~L~~lg~v 51 (64)
T 2p5k_A 18 EIETQDELVDMLKQ--DGYKVTQATVSRDIKELHLV 51 (64)
T ss_dssp CCCSHHHHHHHHHH--TTCCCCHHHHHHHHHHHTCE
T ss_pred CCCCHHHHHHHHHH--hCCCcCHHHHHHHHHHcCCE
Confidence 36999999999753 23344556799999999987
No 23
>1e2t_A NAT, N-hydroxyarylamine O-acetyltransferase; acetyl COA dependent; 2.8A {Salmonella typhimurium} SCOP: d.3.1.5
Probab=32.10 E-value=2 Score=35.24 Aligned_cols=42 Identities=21% Similarity=0.258 Sum_probs=31.7
Q ss_pred CCcccCHHHHHHHHhc-ccCC-CcceeeeeeccccCccEEeeec
Q 031689 27 NDLCLPLKEIYEKIAN-EKSG-CSWELFEVYRHLKSLGYIVGRH 68 (155)
Q Consensus 27 ~g~~lSlq~~y~~~~~-~~~~-~~~~~Y~VY~~Lkr~GYIV~R~ 68 (155)
....|+++++++.+.. +++| |...+-+-|.-|+.+||-|...
T Consensus 50 ~~i~ld~~~l~~KiV~~~RGGyC~ElN~Lf~~~L~~LGF~V~~~ 93 (284)
T 1e2t_A 50 REIQLDETALEEKLLYARRGGYCFELNGLFERALRDIGFNVRSL 93 (284)
T ss_dssp CCCCCSTTHHHHHHTTTCCCBCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCCCCHHHHHHHHhcCCCcEEhHHHHHHHHHHHHHCCCeEEEE
Confidence 4577899999998873 3455 5556666667799999999843
Done!