Query 031690
Match_columns 155
No_of_seqs 128 out of 291
Neff 4.5
Searched_HMMs 13730
Date Mon Mar 25 05:51:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031690.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/031690hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1eeja2 d.17.3.1 (A:1-60) Disu 71.6 4.4 0.00032 24.8 5.2 43 25-77 1-50 (60)
2 d1vqow1 d.59.1.1 (W:1-154) Arc 59.6 2.2 0.00016 30.9 2.2 55 24-88 12-67 (154)
3 d1whya_ d.58.7.1 (A:) Putative 44.1 15 0.0011 23.0 4.3 53 4-61 8-63 (97)
4 d2nrqa1 d.77.1.2 (A:4-144) Hyp 42.2 17 0.0012 25.4 4.7 71 21-104 10-81 (141)
5 d2fpna1 d.129.10.1 (A:1-214) H 40.4 22 0.0016 26.7 5.3 53 26-78 144-210 (214)
6 d1pyya2 d.11.1.1 (A:693-750) P 25.4 14 0.00099 21.8 1.4 17 129-146 2-18 (58)
7 d2plia1 d.145.1.4 (A:5-88) Unc 22.3 32 0.0023 21.4 2.9 28 61-89 3-30 (84)
8 d2r2za1 d.145.1.4 (A:5-88) Put 20.4 36 0.0026 21.0 2.9 39 64-102 3-41 (84)
9 d1khba2 c.109.1.1 (A:10-259) C 20.0 14 0.001 28.7 0.8 46 24-77 42-89 (250)
10 d1t3ba2 d.17.3.1 (A:2-60) Disu 19.9 36 0.0026 20.4 2.6 29 39-77 21-49 (59)
No 1
>d1eeja2 d.17.3.1 (A:1-60) Disulfide bond isomerase, DsbC, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=71.63 E-value=4.4 Score=24.84 Aligned_cols=43 Identities=21% Similarity=0.470 Sum_probs=28.9
Q ss_pred ccHHHHHHHhhhCCc-------cCCCccceeeeecCEEEEeeCCeeeeeecCCeEEEecc
Q 031690 25 DDKRLQSTLKRIGVN-------AIPAIEEVNIFKDDVVIQFLNPKVQASIAANTWVVSGA 77 (155)
Q Consensus 25 DDKKLq~~LkKLg~~-------~I~gIeEVnmfk~d~vihF~nPkVqaS~~aNT~vv~G~ 77 (155)
||.-+|+.|.++|++ +|+|+=||.+ ++.++ |.| ....|+|.|+
T Consensus 1 dea~i~~~L~~~~~~v~sV~~spi~GlyeV~~--~~~i~-------Yvs-~dG~y~i~G~ 50 (60)
T d1eeja2 1 DDAAIQQTLAKMGIKSSDIQPAPVAGMKTVLT--NSGVL-------YIT-DDGKHIIQGP 50 (60)
T ss_dssp CHHHHHHHHHHTTCCEEEEEECSSTTEEEEEE--TTEEE-------EEE-TTSCEEEESC
T ss_pred CHHHHHHHHHhcCCceeEEecCCCCCeEEEEE--CCEEE-------EEc-CCCCEEEEeE
Confidence 677889999998764 6788888755 33333 232 3556777775
No 2
>d1vqow1 d.59.1.1 (W:1-154) Archaeal L30 (L30a) {Archaeon Haloarcula marismortui [TaxId: 2238]}
Probab=59.60 E-value=2.2 Score=30.88 Aligned_cols=55 Identities=18% Similarity=0.328 Sum_probs=43.8
Q ss_pred cccHHHHHHHhhhCCccCCCccceeeeecCEEEEeeCCeeeeeec-CCeEEEecccccchhhhhhh
Q 031690 24 TDDKRLQSTLKRIGVNAIPAIEEVNIFKDDVVIQFLNPKVQASIA-ANTWVVSGAPQTKKLQDILP 88 (155)
Q Consensus 24 ~DDKKLq~~LkKLg~~~I~gIeEVnmfk~d~vihF~nPkVqaS~~-aNT~vv~G~~e~K~l~ellP 88 (155)
.-.++.+.+|+.||+..+.- .|++=++|.+..-+. ..-||.+|.+..+.+.+|+-
T Consensus 12 g~~~~~r~tL~~LrL~k~~~----------~V~~~~tp~~~gML~kVk~yVt~G~~~~~tv~~Li~ 67 (154)
T d1vqow1 12 NMHTDIQDTLEMLNIHHVNH----------CTLVPETDAYRGMVAKVNDFVAFGEPSQETLETVLA 67 (154)
T ss_dssp TSCHHHHHHHHHTTCCSTTE----------EEEECCCHHHHHHHHHSTTSEEEECCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHcCCCcCCC----------EEEecCCHHHHHHHHhhccceeEecCCHHHHHHHHH
Confidence 34688999999999987654 677777776655543 67899999999999999875
No 3
>d1whya_ d.58.7.1 (A:) Putative RNA-binding protein 15B, Rbm15b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=44.08 E-value=15 Score=22.99 Aligned_cols=53 Identities=19% Similarity=0.134 Sum_probs=34.0
Q ss_pred ccc-cCCccccccccccCCCCcccHHHHHHHhhhCCccCCCccceeeeecC--EEEEeeCC
Q 031690 4 SFL-TLALNHRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDD--VVIQFLNP 61 (155)
Q Consensus 4 ~~g-gKGt~RRKkK~v~k~~~~DDKKLq~~LkKLg~~~I~gIeEVnmfk~d--~vihF~nP 61 (155)
+|| |+..+.|.-=+-.=....++..|+..+.+.| .|..|.+.++. -.++|.++
T Consensus 8 ~~g~g~~~Ps~tl~V~nLp~~~t~~~l~~~f~~~G-----~i~~~~~~~~~~~afV~f~~~ 63 (97)
T d1whya_ 8 KIGYGKANPTTRLWVGGLGPNTSLAALAREFDRFG-----SIRTIDHVKGDSFAYIQYESL 63 (97)
T ss_dssp CCCCCCCCCCSCEEEECCCSSCCHHHHHHHHHTTS-----CEEEEEECSSSCCEEEEESSH
T ss_pred CCCCCCCCCCCEEEEcCCCCCCCHHHHHHHHHhhc-----ccceEeeeccccEEEeccCCH
Confidence 455 6777655532222223457788999997776 47788887765 66667666
No 4
>d2nrqa1 d.77.1.2 (A:4-144) Hypothetical protein SSO0741 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=42.22 E-value=17 Score=25.40 Aligned_cols=71 Identities=11% Similarity=0.104 Sum_probs=48.5
Q ss_pred CCCcccHHHHHHHhhhCCccCCC-ccceeeeecCEEEEeeCCeeeeeecCCeEEEecccccchhhhhhhhhhhccchhhH
Q 031690 21 TTTTDDKRLQSTLKRIGVNAIPA-IEEVNIFKDDVVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNL 99 (155)
Q Consensus 21 ~~~~DDKKLq~~LkKLg~~~I~g-IeEVnmfk~d~vihF~nPkVqaS~~aNT~vv~G~~e~K~l~ellP~Il~QLG~d~l 99 (155)
.++-|..|+..+|..| +|. |++..+-...+-=||.|| -++++..-+.|...+.+-.++..|+.+.+
T Consensus 10 hATED~~kV~~AL~~~----~~~~i~~~~ie~~~~~Gh~Gnp---------I~ils~~l~kK~a~~~~~~l~~~l~~~~~ 76 (141)
T d2nrqa1 10 HETEDYNKIVNTIESF----FSPLISNSKKNVTTAQGHYGNK---------IIILEYRFDRKSGEQFFKIILEKIETSEL 76 (141)
T ss_dssp CTTSCHHHHHHHHHHH----TTTGGGGSEEEEEEEECSSSCE---------EEEEEEEECHHHHHHHHHHHHTTSCHHHH
T ss_pred EeccCHHHHHHHHHHh----cccccccCceEEEEecccCCCc---------EEEEEEEEecccHHHHHHHHHHHcCHHHH
Confidence 3567999999999876 332 333333222233466666 56788888888888889999999998877
Q ss_pred HHHHH
Q 031690 100 DNLRK 104 (155)
Q Consensus 100 ~~L~~ 104 (155)
..|..
T Consensus 77 ~~L~~ 81 (141)
T d2nrqa1 77 MLILT 81 (141)
T ss_dssp HHHHT
T ss_pred HHHHH
Confidence 76543
No 5
>d2fpna1 d.129.10.1 (A:1-214) Hypothetical protein YwmB {Bacillus subtilis [TaxId: 1423]}
Probab=40.35 E-value=22 Score=26.68 Aligned_cols=53 Identities=19% Similarity=0.286 Sum_probs=33.6
Q ss_pred cHHHHHHHhhhCCccCCCccceeeee-----cC--EEEEeeC--CeeeeeecCC-----eEEEeccc
Q 031690 26 DKRLQSTLKRIGVNAIPAIEEVNIFK-----DD--VVIQFLN--PKVQASIAAN-----TWVVSGAP 78 (155)
Q Consensus 26 DKKLq~~LkKLg~~~I~gIeEVnmfk-----~d--~vihF~n--PkVqaS~~aN-----T~vv~G~~ 78 (155)
.+++...|+.|+++.|.++++.|++- .. ..|.... --||.++..+ ||++-|.|
T Consensus 144 ~~~~~~~l~~l~A~~vE~~~~~~~~S~saYs~~~~~~i~~~~~k~NlqiAlr~~~~~~~T~i~igTP 210 (214)
T d2fpna1 144 QKKANQLLNEFQARSVEHVVEPNFVSISAFTDEWEEYIMTSKHKMNLQIALRSAGMGGKHTVTVGTP 210 (214)
T ss_dssp HHHHHHHHHHHC---CCCCCBTTEEEEEECCTTSSCCEEETTEEECEEEEEEC------CEEEEESS
T ss_pred HHHHHHHHHHcCCceeeeeecccEEEEEEEchhhhhhhhcCCeeEEEEEEEeecCCCCcEEEEEeee
Confidence 35788899999999999999999842 11 2222222 2367776655 78888876
No 6
>d1pyya2 d.11.1.1 (A:693-750) Penicillin-binding protein 2x (pbp-2x), c-terminal domain {Streptococcus pneumoniae [TaxId: 1313]}
Probab=25.45 E-value=14 Score=21.84 Aligned_cols=17 Identities=41% Similarity=0.528 Sum_probs=13.1
Q ss_pred CCcccCCCCCChhHHhhc
Q 031690 129 DEVPELVAGETFEAAAEE 146 (155)
Q Consensus 129 ddVPdLV~genFee~sk~ 146 (155)
++||||+ |.+.+||.+.
T Consensus 2 ~evPdl~-G~s~~~A~~~ 18 (58)
T d1pyya2 2 EEVPDMY-GWTKETAETL 18 (58)
T ss_dssp CBCCCCT-TCBHHHHHHH
T ss_pred CcCCCcC-CCcHHHHHHH
Confidence 5899988 7888887643
No 7
>d2plia1 d.145.1.4 (A:5-88) Uncharacterized protein NMB0537 {Neisseria meningitidis [TaxId: 487]}
Probab=22.34 E-value=32 Score=21.43 Aligned_cols=28 Identities=7% Similarity=0.432 Sum_probs=22.5
Q ss_pred CeeeeeecCCeEEEecccccchhhhhhhh
Q 031690 61 PKVQASIAANTWVVSGAPQTKKLQDILPG 89 (155)
Q Consensus 61 PkVqaS~~aNT~vv~G~~e~K~l~ellP~ 89 (155)
+.|+ .+..|+|.|.|...-.++.++|.-
T Consensus 3 ~~I~-~~~~~~~~v~g~~~l~dl~~~~~~ 30 (84)
T d2plia1 3 DNIH-AVSSERWRIHAATEIEDINTFFGT 30 (84)
T ss_dssp CSEE-EEETTEEEEETTCBHHHHHHHHCC
T ss_pred cceE-EeCCCEEEEEecCCHHHHHHHhCC
Confidence 3444 357899999999999999998853
No 8
>d2r2za1 d.145.1.4 (A:5-88) Putative hemolysin EF0700 {Enterococcus faecalis [TaxId: 1351]}
Probab=20.36 E-value=36 Score=21.03 Aligned_cols=39 Identities=13% Similarity=0.284 Sum_probs=27.6
Q ss_pred eeeecCCeEEEecccccchhhhhhhhhhhccchhhHHHH
Q 031690 64 QASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNL 102 (155)
Q Consensus 64 qaS~~aNT~vv~G~~e~K~l~ellP~Il~QLG~d~l~~L 102 (155)
+.-+..|+|.|.|...-.++.+.|.-=|+.=..+.+..+
T Consensus 3 ~~~i~~~~~~v~G~~~l~dl~~~l~~~l~~~~~~TigG~ 41 (84)
T d2r2za1 3 YTQVADNEYLVQGRMLIDEFNEVFETDLHMSDVDTMAGY 41 (84)
T ss_dssp EEEEETTEEEEETTSBHHHHHHHHTCCCCCTTCCBHHHH
T ss_pred eEEECCCEEEEEeeCCHHHHHHHHCcCCCCccchhHHHH
Confidence 345678999999999999999988543443334455544
No 9
>d1khba2 c.109.1.1 (A:10-259) Cytosolic phosphoenolpyruvate carboxykinase (GTP-hydrolyzing) {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.04 E-value=14 Score=28.67 Aligned_cols=46 Identities=22% Similarity=0.389 Sum_probs=32.1
Q ss_pred cccHHHHHHHhhhC-CccCCCccceeeeecC-EEEEeeCCeeeeeecCCeEEEecc
Q 031690 24 TDDKRLQSTLKRIG-VNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAANTWVVSGA 77 (155)
Q Consensus 24 ~DDKKLq~~LkKLg-~~~I~gIeEVnmfk~d-~vihF~nPkVqaS~~aNT~vv~G~ 77 (155)
.|...|...+..-| +..+ + +-+ ..+||.+|.=+|-..++||+.+-.
T Consensus 42 eE~~~l~~~~v~~G~~~~L------~--k~pn~~l~rsdP~DvARve~rTfI~t~~ 89 (250)
T d1khba2 42 EENGRLLGQMEEEGILRRL------K--KYDNCWLALTDPRDVARIESKTVIVTQE 89 (250)
T ss_dssp HHHHHHHHHHHHHTSCEEC------T--TSBSCEEECCCTTSSSCCGGGEEEECSS
T ss_pred HHHHHHHHHHHHcCCcccc------c--CCCCcEEEecCcccceeecccceeecCc
Confidence 35566666665555 1111 1 223 889999999899999999999743
No 10
>d1t3ba2 d.17.3.1 (A:2-60) Disulfide bond isomerase, DsbC, N-terminal domain {Haemophilus influenzae [TaxId: 727]}
Probab=19.87 E-value=36 Score=20.36 Aligned_cols=29 Identities=17% Similarity=0.345 Sum_probs=17.6
Q ss_pred ccCCCccceeeeecCEEEEeeCCeeeeeecCCeEEEecc
Q 031690 39 NAIPAIEEVNIFKDDVVIQFLNPKVQASIAANTWVVSGA 77 (155)
Q Consensus 39 ~~I~gIeEVnmfk~d~vihF~nPkVqaS~~aNT~vv~G~ 77 (155)
.+|||+=||.+ ++.++. .| ....|+|.|.
T Consensus 21 spi~GlyeV~~--~~gi~Y-------vs-~dg~y~i~G~ 49 (59)
T d1t3ba2 21 SPISGIKTAVT--DQGILY-------VS-EDGKYLFEGK 49 (59)
T ss_dssp CSSTTEECCEE--TTEECE-------EE-SSSSCEECSC
T ss_pred CCCCCeEEEEE--CCEEEE-------Ec-CCCCEEEEeE
Confidence 57888888866 333332 22 3456777775
Done!