Your job contains 1 sequence.
>031693
MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPE
TPMSVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKV
KQSDPYCQYMPLESICKSIIGTAATMGIKVVKELE
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 031693
(155 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2117627 - symbol:MRPL11 "mitochondrial ribosom... 581 2.0e-56 1
POMBASE|SPAC1486.07c - symbol:mrpl19 "mitochondrial ribos... 282 9.7e-25 1
FB|FBgn0038234 - symbol:mRpL11 "mitochondrial ribosomal p... 264 7.8e-23 1
UNIPROTKB|Q9Y3B7 - symbol:MRPL11 "39S ribosomal protein L... 264 7.8e-23 1
UNIPROTKB|Q2YDI0 - symbol:MRPL11 "39S ribosomal protein L... 262 1.3e-22 1
UNIPROTKB|F1RU54 - symbol:MRPL11 "Uncharacterized protein... 262 1.3e-22 1
UNIPROTKB|E2RBT1 - symbol:MRPL11 "Uncharacterized protein... 260 2.1e-22 1
RGD|1359665 - symbol:mrpl11 "mitochondrial ribosomal prot... 253 1.1e-21 1
UNIPROTKB|Q5XIE3 - symbol:Mrpl11 "39S ribosomal protein L... 253 1.1e-21 1
MGI|MGI:2137215 - symbol:Mrpl11 "mitochondrial ribosomal ... 248 3.9e-21 1
WB|WBGene00015133 - symbol:mrpl-11 species:6239 "Caenorha... 245 8.0e-21 1
ZFIN|ZDB-GENE-040718-294 - symbol:mrpl11 "mitochondrial r... 245 8.0e-21 1
GENEDB_PFALCIPARUM|PF11_0113 - symbol:PF11_0113 "ribosoma... 243 1.3e-20 1
UNIPROTKB|Q8IIQ5 - symbol:PF11_0113 "Mitochondrial riboso... 243 1.3e-20 1
CGD|CAL0000474 - symbol:MRPL19 species:5476 "Candida albi... 242 1.7e-20 1
ASPGD|ASPL0000056238 - symbol:AN0116 species:162425 "Emer... 232 1.9e-19 1
TIGR_CMR|CPS_4773 - symbol:CPS_4773 "ribosomal protein L1... 227 6.5e-19 1
UNIPROTKB|Q9KV34 - symbol:rplK "50S ribosomal protein L11... 226 8.3e-19 1
TIGR_CMR|VC_0324 - symbol:VC_0324 "ribosomal protein L11"... 226 8.3e-19 1
SGD|S000005129 - symbol:MRPL19 "Mitochondrial ribosomal p... 222 2.2e-18 1
TIGR_CMR|SO_0220 - symbol:SO_0220 "ribosomal protein L11"... 221 2.8e-18 1
TIGR_CMR|SPO_3514 - symbol:SPO_3514 "ribosomal protein L1... 210 4.1e-17 1
UNIPROTKB|P0A7J7 - symbol:rplK "50S ribosomal subunit pro... 207 8.6e-17 1
TIGR_CMR|CHY_2323 - symbol:CHY_2323 "ribosomal protein L1... 198 7.7e-16 1
UNIPROTKB|P66056 - symbol:rplK "50S ribosomal protein L11... 195 1.6e-15 1
TAIR|locus:2037970 - symbol:PRPL11 "plastid ribosomal pro... 195 1.6e-15 1
TIGR_CMR|GSU_2867 - symbol:GSU_2867 "ribosomal protein L1... 194 2.0e-15 1
TIGR_CMR|ECH_0956 - symbol:ECH_0956 "ribosomal protein L1... 192 3.3e-15 1
TIGR_CMR|BA_0097 - symbol:BA_0097 "ribosomal protein L11"... 191 4.2e-15 1
TIGR_CMR|DET_0993 - symbol:DET_0993 "ribosomal protein L1... 187 1.1e-14 1
TIGR_CMR|CBU_0226 - symbol:CBU_0226 "ribosomal protein L1... 174 2.7e-13 1
TIGR_CMR|APH_1028 - symbol:APH_1028 "ribosomal protein L1... 164 3.1e-12 1
TIGR_CMR|CJE_0524 - symbol:CJE_0524 "ribosomal protein L1... 160 8.2e-12 1
TAIR|locus:2153162 - symbol:AT5G51610 species:3702 "Arabi... 129 1.6e-08 1
TIGR_CMR|NSE_0682 - symbol:NSE_0682 "ribosomal protein L1... 103 9.0e-06 1
UNIPROTKB|H0YCD5 - symbol:MRPL11 "39S ribosomal protein L... 91 0.00017 1
>TAIR|locus:2117627 [details] [associations]
symbol:MRPL11 "mitochondrial ribosomal protein L11"
species:3702 "Arabidopsis thaliana" [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0005840 "ribosome" evidence=ISS]
[GO:0006412 "translation" evidence=IEA] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] [GO:0006354 "DNA-dependent transcription,
elongation" evidence=RCA] [GO:0006626 "protein targeting to
mitochondrion" evidence=RCA] InterPro:IPR000911 InterPro:IPR006519
InterPro:IPR020783 Pfam:PF00298 SMART:SM00649 Pfam:PF03946
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 EMBL:AL161587 EMBL:AL117188 eggNOG:COG0080
HOGENOM:HOG000082123 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 TIGRFAMs:TIGR01632 HSSP:P29395 OMA:CKDFNEK
EMBL:AY088804 EMBL:BT025614 EMBL:AK226300 IPI:IPI00519099
PIR:T41746 RefSeq:NP_195274.1 UniGene:At.43896
ProteinModelPortal:Q9SVW7 SMR:Q9SVW7 STRING:Q9SVW7 PaxDb:Q9SVW7
PRIDE:Q9SVW7 EnsemblPlants:AT4G35490.1 GeneID:829701
KEGG:ath:AT4G35490 TAIR:At4g35490 InParanoid:Q9SVW7
PhylomeDB:Q9SVW7 ProtClustDB:CLSN2686076 ArrayExpress:Q9SVW7
Genevestigator:Q9SVW7 Uniprot:Q9SVW7
Length = 155
Score = 581 (209.6 bits), Expect = 2.0e-56, P = 2.0e-56
Identities = 109/154 (70%), Positives = 132/154 (85%)
Query: 2 ATLKEILTRRPVAATIRLTVXXXXXXXXXXXXXXXXQYRLNLMAFCKDFNARTQKYKPET 61
A KEIL RRPVAATIRLTV QYRLNLMAFCKDFNARTQKYKP+T
Sbjct: 3 AAAKEIL-RRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDT 61
Query: 62 PMSVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVK 121
PM+VTITAFKDN+FEFTVKSP+V+WY+KKAAG++ GS+RPGH++ +T++++H+YEIAKVK
Sbjct: 62 PMAVTITAFKDNSFEFTVKSPTVSWYIKKAAGVDKGSTRPGHLSVTTLSVRHVYEIAKVK 121
Query: 122 QSDPYCQYMPLESICKSIIGTAATMGIKVVKELE 155
Q+DP+CQYMPLESICKSIIGTA +MGIK+V++LE
Sbjct: 122 QTDPFCQYMPLESICKSIIGTANSMGIKIVQDLE 155
>POMBASE|SPAC1486.07c [details] [associations]
symbol:mrpl19 "mitochondrial ribosomal protein subunit
L19 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003735 "structural constituent of ribosome" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005762 "mitochondrial
large ribosomal subunit" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0032543 "mitochondrial translation" evidence=NAS]
InterPro:IPR000911 InterPro:IPR006519 InterPro:IPR020783
Pfam:PF00298 PROSITE:PS00359 SMART:SM00649 PomBase:SPAC1486.07c
Pfam:PF03946 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0005762
GO:GO:0003735 GO:GO:0032543 eggNOG:COG0080 HOGENOM:HOG000082123
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
TIGRFAMs:TIGR01632 HSSP:P29395 OMA:CKDFNEK PIR:T50076
RefSeq:NP_594095.1 ProteinModelPortal:Q9UTK2 STRING:Q9UTK2
EnsemblFungi:SPAC1486.07c.1 GeneID:2541549 KEGG:spo:SPAC1486.07c
OrthoDB:EOG4Q8872 NextBio:20802646 Uniprot:Q9UTK2
Length = 144
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 54/111 (48%), Positives = 72/111 (64%)
Query: 41 LNLMAFCKDFNARTQKYKPETPMSVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR 100
L + FCK+FNART + P TP+ IT TF FT+ +P +W + K +E GSS
Sbjct: 33 LKSIDFCKEFNARTAGWMPNTPVPCKITVTPQRTFTFTIHTPPTSWLISKTLDLEKGSSS 92
Query: 101 PGHVTASTVTLKHIYEIAKVKQSDPYCQYMPLESICKSIIGTAATMGIKVV 151
P H ++LKHIYEIAK+K +DP Q + L S+CKS+IGTA +MG+KVV
Sbjct: 93 PLHDIKGQLSLKHIYEIAKLKSTDPSLQGIELLSLCKSVIGTAKSMGVKVV 143
>FB|FBgn0038234 [details] [associations]
symbol:mRpL11 "mitochondrial ribosomal protein L11"
species:7227 "Drosophila melanogaster" [GO:0005762 "mitochondrial
large ribosomal subunit" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0003735 "structural constituent of ribosome"
evidence=ISS] InterPro:IPR000911 InterPro:IPR020783 Pfam:PF00298
PROSITE:PS00359 SMART:SM00649 Pfam:PF03946 EMBL:AE014297
GO:GO:0006417 GO:GO:0006412 GO:GO:0005762 GO:GO:0003735
GO:GO:0031047 eggNOG:COG0080 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 CTD:65003 GeneTree:ENSGT00390000003153 OMA:CKDFNEK
EMBL:AY094892 RefSeq:NP_524351.1 UniGene:Dm.14087
ProteinModelPortal:Q9VFJ2 SMR:Q9VFJ2 DIP:DIP-23522N IntAct:Q9VFJ2
MINT:MINT-1624235 STRING:Q9VFJ2 PaxDb:Q9VFJ2 PRIDE:Q9VFJ2
EnsemblMetazoa:FBtr0082953 GeneID:41757 KEGG:dme:Dmel_CG3351
FlyBase:FBgn0038234 InParanoid:Q9VFJ2 OrthoDB:EOG4XD27D
PhylomeDB:Q9VFJ2 GenomeRNAi:41757 NextBio:825423 Bgee:Q9VFJ2
GermOnline:CG3351 Uniprot:Q9VFJ2
Length = 196
Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 48/118 (40%), Positives = 75/118 (63%)
Query: 38 QYRLNLMAFCKDFNARTQKYKPETPMSVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESG 97
Q +N+ AFCKDFNA+T + K P+ I+ D +++ + P T++LK+AAGI+ G
Sbjct: 45 QRAINIAAFCKDFNAKTAEMKEGVPLPCRISVNSDRSYDLAIHHPPATFFLKQAAGIQRG 104
Query: 98 SSRPGHVTASTVTLKHIYEIAKVKQSDPYCQYMPLESICKSIIGTAATMGIKVVKELE 155
+ PG A +TLKH+YEIA +K DP + ++ +C+ +I A T GIKVV+E++
Sbjct: 105 TMTPGKEVAGMITLKHLYEIAAIKIQDPPNVLLTMQQMCEMLISIARTCGIKVVREID 162
>UNIPROTKB|Q9Y3B7 [details] [associations]
symbol:MRPL11 "39S ribosomal protein L11, mitochondrial"
species:9606 "Homo sapiens" [GO:0005761 "mitochondrial ribosome"
evidence=NAS] [GO:0006412 "translation" evidence=NAS] [GO:0003735
"structural constituent of ribosome" evidence=NAS] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR000911
InterPro:IPR006519 InterPro:IPR020783 Pfam:PF00298 PROSITE:PS00359
SMART:SM00649 EMBL:AB049638 Pfam:PF03946 GO:GO:0006412
EMBL:CH471076 GO:GO:0005840 GO:GO:0003735 EMBL:AP002748
GO:GO:0005761 eggNOG:COG0080 HOGENOM:HOG000082123
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
TIGRFAMs:TIGR01632 CTD:65003 HOVERGEN:HBG036110 OMA:CKDFNEK
OrthoDB:EOG46Q6TQ EMBL:AF151871 EMBL:AK290084 EMBL:BC005002
EMBL:BC108277 EMBL:BM554886 EMBL:AB051338 IPI:IPI00007001
IPI:IPI00333848 IPI:IPI00377233 RefSeq:NP_057134.1
RefSeq:NP_733934.1 RefSeq:NP_733935.1 UniGene:Hs.418450
ProteinModelPortal:Q9Y3B7 SMR:Q9Y3B7 IntAct:Q9Y3B7 STRING:Q9Y3B7
PhosphoSite:Q9Y3B7 DMDM:22001931 PaxDb:Q9Y3B7 PRIDE:Q9Y3B7
DNASU:65003 Ensembl:ENST00000310999 Ensembl:ENST00000329819
Ensembl:ENST00000430466 GeneID:65003 KEGG:hsa:65003 UCSC:uc001ohz.4
UCSC:uc001oia.4 GeneCards:GC11M066202 HGNC:HGNC:14042 MIM:611826
neXtProt:NX_Q9Y3B7 PharmGKB:PA30940 InParanoid:Q9Y3B7
PhylomeDB:Q9Y3B7 ChiTaRS:MRPL11 GenomeRNAi:65003 NextBio:67180
ArrayExpress:Q9Y3B7 Bgee:Q9Y3B7 CleanEx:HS_MRPL11
Genevestigator:Q9Y3B7 GermOnline:ENSG00000174547 Uniprot:Q9Y3B7
Length = 192
Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 59/148 (39%), Positives = 86/148 (58%)
Query: 10 RRP-VAATIRLTVXXXXXXXXXXXXXXXXQYRLNLMAFCKDFNARTQKYKPETPMSVTIT 68
R+P V IR V Q +++ FCK+FN RT+ K P+ I
Sbjct: 12 RKPEVGGVIRAIVRAGLAMPGPPLGPVLGQRGVSINQFCKEFNERTKDIKEGIPLPTKIL 71
Query: 69 AFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVK-QSDPYC 127
D TFE + P+V+++LK AAGIE G+ + G A VTLKH+YEIA++K Q + +
Sbjct: 72 VKPDRTFEIKIGQPTVSYFLKAAAGIEKGARQTGKEVAGLVTLKHVYEIARIKAQDEAFA 131
Query: 128 -QYMPLESICKSIIGTAATMGIKVVKEL 154
Q +PL S+ +SIIG+A ++GI+VVK+L
Sbjct: 132 LQDVPLSSVVRSIIGSARSLGIRVVKDL 159
>UNIPROTKB|Q2YDI0 [details] [associations]
symbol:MRPL11 "39S ribosomal protein L11, mitochondrial"
species:9913 "Bos taurus" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR000911 InterPro:IPR006519
InterPro:IPR020783 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 eggNOG:COG0080 HOGENOM:HOG000082123
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
TIGRFAMs:TIGR01632 PDB:2FTC PDBsum:2FTC EMBL:BT021538 EMBL:BC110214
IPI:IPI00696336 RefSeq:NP_001014932.1 UniGene:Bt.1415
ProteinModelPortal:Q2YDI0 STRING:Q2YDI0 Ensembl:ENSBTAT00000019979
GeneID:515990 KEGG:bta:515990 CTD:65003
GeneTree:ENSGT00390000003153 HOVERGEN:HBG036110 InParanoid:Q2YDI0
OMA:CKDFNEK OrthoDB:EOG46Q6TQ EvolutionaryTrace:Q2YDI0
NextBio:20872082 Uniprot:Q2YDI0
Length = 192
Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 54/119 (45%), Positives = 78/119 (65%)
Query: 38 QYRLNLMAFCKDFNARTQKYKPETPMSVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESG 97
Q +++ FCK+FN +T+ K P+ I D TFE + P+V+++LK AAGIE G
Sbjct: 41 QRGVSINQFCKEFNEKTKDIKEGIPLPTKIFVKPDRTFEIKIGQPTVSYFLKAAAGIEKG 100
Query: 98 SSRPGHVTASTVTLKHIYEIAKVK-QSDPYC-QYMPLESICKSIIGTAATMGIKVVKEL 154
+ G A VTLKH+YEIA+VK Q D + Q +PL S+ +SIIG+A ++GI+VVK+L
Sbjct: 101 ARNTGKEVAGLVTLKHVYEIARVKAQDDAFALQDVPLSSVVRSIIGSARSLGIRVVKDL 159
>UNIPROTKB|F1RU54 [details] [associations]
symbol:MRPL11 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR000911 InterPro:IPR006519 InterPro:IPR020783
Pfam:PF00298 SMART:SM00649 Pfam:PF03946 GO:GO:0005739 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 TIGRFAMs:TIGR01632 GeneTree:ENSGT00390000003153
OMA:CKDFNEK EMBL:CU928034 RefSeq:XP_003122536.1
Ensembl:ENSSSCT00000014148 GeneID:100518767 KEGG:ssc:100518767
Uniprot:F1RU54
Length = 192
Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 54/119 (45%), Positives = 78/119 (65%)
Query: 38 QYRLNLMAFCKDFNARTQKYKPETPMSVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESG 97
Q +++ FCK+FN +T+ K P+ I D TFE + P+V+++LK AAGIE G
Sbjct: 41 QRGVSINQFCKEFNEKTKDIKEGIPLPTKIFVKPDRTFEIKIGQPTVSYFLKAAAGIEKG 100
Query: 98 SSRPGHVTASTVTLKHIYEIAKVK-QSDPYC-QYMPLESICKSIIGTAATMGIKVVKEL 154
+ G A VTLKH+YEIA+VK Q D + Q +PL S+ +SIIG+A ++GI+VVK+L
Sbjct: 101 ARHTGKEVAGLVTLKHVYEIARVKAQDDAFALQDVPLSSVVRSIIGSARSLGIRVVKDL 159
>UNIPROTKB|E2RBT1 [details] [associations]
symbol:MRPL11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR000911 InterPro:IPR006519
InterPro:IPR020783 Pfam:PF00298 SMART:SM00649 Pfam:PF03946
GO:GO:0005739 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
TIGRFAMs:TIGR01632 CTD:65003 GeneTree:ENSGT00390000003153
OMA:CKDFNEK EMBL:AAEX03011628 RefSeq:XP_533221.1
ProteinModelPortal:E2RBT1 Ensembl:ENSCAFT00000020140 GeneID:476012
KEGG:cfa:476012 NextBio:20851744 Uniprot:E2RBT1
Length = 192
Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 59/148 (39%), Positives = 86/148 (58%)
Query: 10 RRPVAA-TIRLTVXXXXXXXXXXXXXXXXQYRLNLMAFCKDFNARTQKYKPETPMSVTIT 68
R+P A IR V Q +++ FCK+FN +T+ K P+ I
Sbjct: 12 RKPEAGGVIRTIVRAGQAMTGPPLGPILGQRGVSINQFCKEFNEKTKDIKEGIPLPTKIF 71
Query: 69 AFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVK-QSDPYC 127
D TFE + P+V+++LK AAGIE G+ + G A VTLKH+YEIA+VK Q + +
Sbjct: 72 VKPDRTFEIKIGQPTVSYFLKAAAGIEKGARQTGKEVAGLVTLKHVYEIAQVKAQDEAFA 131
Query: 128 -QYMPLESICKSIIGTAATMGIKVVKEL 154
Q +PL S+ +SIIG+A ++GI+VVK+L
Sbjct: 132 LQDVPLSSVVRSIIGSARSLGIRVVKDL 159
>RGD|1359665 [details] [associations]
symbol:mrpl11 "mitochondrial ribosomal protein L11"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR000911 InterPro:IPR006519
InterPro:IPR020783 Pfam:PF00298 SMART:SM00649 RGD:1359665
Pfam:PF03946 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 eggNOG:COG0080 HOGENOM:HOG000082123
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
TIGRFAMs:TIGR01632 CTD:65003 GeneTree:ENSGT00390000003153
HOVERGEN:HBG036110 EMBL:BC083740 IPI:IPI00198125
RefSeq:NP_001006974.1 UniGene:Rn.3762 ProteinModelPortal:Q5XIE3
STRING:Q5XIE3 Ensembl:ENSRNOT00000027091 GeneID:293666
KEGG:rno:293666 UCSC:RGD:1359665 InParanoid:Q5XIE3 NextBio:636676
ArrayExpress:Q5XIE3 Genevestigator:Q5XIE3
GermOnline:ENSRNOG00000019970 Uniprot:Q5XIE3
Length = 203
Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 52/119 (43%), Positives = 77/119 (64%)
Query: 38 QYRLNLMAFCKDFNARTQKYKPETPMSVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESG 97
Q +++ FCK+FN +T+ K P+ I D TFE + P+++++LK AAGIE G
Sbjct: 41 QRGVSINQFCKEFNEKTKDIKEGIPLPTKIFIKPDRTFELKIGQPTISYFLKAAAGIEKG 100
Query: 98 SSRPGHVTASTVTLKHIYEIAKVKQSDPY--CQYMPLESICKSIIGTAATMGIKVVKEL 154
+ + G A V+LKH+YEIA+VK D Q +PL SI +SIIG+A ++GI+VVK+L
Sbjct: 101 ARQTGKEVAGLVSLKHVYEIARVKAKDEAFAMQDVPLSSIVRSIIGSARSLGIRVVKDL 159
>UNIPROTKB|Q5XIE3 [details] [associations]
symbol:Mrpl11 "39S ribosomal protein L11, mitochondrial"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000911 InterPro:IPR006519 InterPro:IPR020783
Pfam:PF00298 SMART:SM00649 RGD:1359665 Pfam:PF03946 GO:GO:0005739
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 eggNOG:COG0080
HOGENOM:HOG000082123 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 TIGRFAMs:TIGR01632 CTD:65003
GeneTree:ENSGT00390000003153 HOVERGEN:HBG036110 EMBL:BC083740
IPI:IPI00198125 RefSeq:NP_001006974.1 UniGene:Rn.3762
ProteinModelPortal:Q5XIE3 STRING:Q5XIE3 Ensembl:ENSRNOT00000027091
GeneID:293666 KEGG:rno:293666 UCSC:RGD:1359665 InParanoid:Q5XIE3
NextBio:636676 ArrayExpress:Q5XIE3 Genevestigator:Q5XIE3
GermOnline:ENSRNOG00000019970 Uniprot:Q5XIE3
Length = 203
Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 52/119 (43%), Positives = 77/119 (64%)
Query: 38 QYRLNLMAFCKDFNARTQKYKPETPMSVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESG 97
Q +++ FCK+FN +T+ K P+ I D TFE + P+++++LK AAGIE G
Sbjct: 41 QRGVSINQFCKEFNEKTKDIKEGIPLPTKIFIKPDRTFELKIGQPTISYFLKAAAGIEKG 100
Query: 98 SSRPGHVTASTVTLKHIYEIAKVKQSDPY--CQYMPLESICKSIIGTAATMGIKVVKEL 154
+ + G A V+LKH+YEIA+VK D Q +PL SI +SIIG+A ++GI+VVK+L
Sbjct: 101 ARQTGKEVAGLVSLKHVYEIARVKAKDEAFAMQDVPLSSIVRSIIGSARSLGIRVVKDL 159
>MGI|MGI:2137215 [details] [associations]
symbol:Mrpl11 "mitochondrial ribosomal protein L11"
species:10090 "Mus musculus" [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005762 "mitochondrial large ribosomal subunit" evidence=ISO]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR000911 InterPro:IPR006519 InterPro:IPR020783
Pfam:PF00298 PROSITE:PS00359 SMART:SM00649 MGI:MGI:2137215
Pfam:PF03946 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 eggNOG:COG0080 HOGENOM:HOG000082123
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
TIGRFAMs:TIGR01632 CTD:65003 GeneTree:ENSGT00390000003153
HOVERGEN:HBG036110 OMA:CKDFNEK OrthoDB:EOG46Q6TQ EMBL:AB049639
EMBL:AK002797 EMBL:AK010329 EMBL:AK167247 EMBL:BC046750
IPI:IPI00132470 RefSeq:NP_079829.1 UniGene:Mm.28494
ProteinModelPortal:Q9CQF0 SMR:Q9CQF0 STRING:Q9CQF0
PhosphoSite:Q9CQF0 PaxDb:Q9CQF0 PRIDE:Q9CQF0
Ensembl:ENSMUST00000025836 GeneID:66419 KEGG:mmu:66419
UCSC:uc008gbt.2 InParanoid:Q9CQF0 NextBio:321635 Bgee:Q9CQF0
CleanEx:MM_MRPL11 Genevestigator:Q9CQF0
GermOnline:ENSMUSG00000024902 Uniprot:Q9CQF0
Length = 192
Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 52/119 (43%), Positives = 77/119 (64%)
Query: 38 QYRLNLMAFCKDFNARTQKYKPETPMSVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESG 97
Q +++ FCK+FN +T+ K P+ I D TFE + P+V+++LK AAGIE G
Sbjct: 41 QRGVSINQFCKEFNEKTKDIKEGIPLPTKIFIKPDRTFELKIGQPTVSYFLKAAAGIEKG 100
Query: 98 SSRPGHVTASTVTLKHIYEIAKVK-QSDPYC-QYMPLESICKSIIGTAATMGIKVVKEL 154
+ G A V+LKH+YEIA VK + D + Q +PL S+ +SIIG+A ++GI+VVK+L
Sbjct: 101 ARHTGKEVAGLVSLKHVYEIACVKAKDDAFAMQDVPLSSVVRSIIGSARSLGIRVVKDL 159
>WB|WBGene00015133 [details] [associations]
symbol:mrpl-11 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR000911 InterPro:IPR020783 Pfam:PF00298 PROSITE:PS00359
SMART:SM00649 Pfam:PF03946 GO:GO:0005739 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 eggNOG:COG0080
HOGENOM:HOG000082123 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 GeneTree:ENSGT00390000003153 OMA:CKDFNEK
EMBL:FO080163 PIR:S27795 RefSeq:NP_498923.1
ProteinModelPortal:P34264 SMR:P34264 DIP:DIP-24352N
MINT:MINT-1047973 STRING:P34264 PaxDb:P34264
EnsemblMetazoa:B0303.15 GeneID:181917 KEGG:cel:CELE_B0303.15
UCSC:B0303.15 CTD:181917 WormBase:B0303.15 InParanoid:P34264
NextBio:915782 Uniprot:P34264
Length = 195
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 47/113 (41%), Positives = 68/113 (60%)
Query: 38 QYRLNLMAFCKDFNARTQKYKPETPMSVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESG 97
Q LN+ FCK+FN T +K P+ IT D T++ + +P+ TW LK+AAGI G
Sbjct: 44 QRGLNVANFCKEFNKETGHFKQGVPLPTRITVKPDRTYDLEICTPTTTWLLKQAAGIGRG 103
Query: 98 SSRPGHVTASTVTLKHIYEIAKVKQSDPYCQYMPLESICKSIIGTAATMGIKV 150
+ + +T+KH+YEIAK+K D Q++PLE IC+ +I T T+GI V
Sbjct: 104 KASKDEIVGK-LTVKHLYEIAKIKSRDKALQHVPLEQICRMLIKTCRTLGIDV 155
>ZFIN|ZDB-GENE-040718-294 [details] [associations]
symbol:mrpl11 "mitochondrial ribosomal protein L11"
species:7955 "Danio rerio" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR000911
InterPro:IPR006519 InterPro:IPR020783 InterPro:IPR020785
Pfam:PF00298 PROSITE:PS00359 SMART:SM00649 Pfam:PF03946
ZFIN:ZDB-GENE-040718-294 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
eggNOG:COG0080 HOGENOM:HOG000082123 Gene3D:1.10.10.250
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF46906 SUPFAM:SSF54747 TIGRFAMs:TIGR01632 CTD:65003
HOVERGEN:HBG036110 OrthoDB:EOG46Q6TQ EMBL:BC076246 IPI:IPI00484175
RefSeq:NP_001002556.1 UniGene:Dr.27215 ProteinModelPortal:Q6DGU3
STRING:Q6DGU3 GeneID:436829 KEGG:dre:436829 InParanoid:Q6DGU3
NextBio:20831261 Uniprot:Q6DGU3
Length = 196
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 48/112 (42%), Positives = 74/112 (66%)
Query: 45 AFCKDFNARTQKYKPETPMSVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHV 104
AFCKDFN RT+ K P+ V I D T++ + P+V+++LK+AAGIE G+ + GH
Sbjct: 48 AFCKDFNERTKDLKEGIPLPVKINVKPDRTYDLKIGQPTVSYFLKQAAGIEKGAGKTGHE 107
Query: 105 TASTVTLKHIYEIAKVKQSDPYCQYMP--LESICKSIIGTAATMGIKVVKEL 154
A VT++ +YEIA+VK D + ++++ KSIIG+A ++GI+VV +L
Sbjct: 108 IAGMVTVRAVYEIARVKSQDECFKLRDTTMQNVVKSIIGSARSLGIQVVNDL 159
>GENEDB_PFALCIPARUM|PF11_0113 [details] [associations]
symbol:PF11_0113 "ribosomal protein L11,
putative" species:5833 "Plasmodium falciparum" [GO:0000315
"organellar large ribosomal subunit" evidence=ISS]
InterPro:IPR000911 InterPro:IPR020783 Pfam:PF00298 SMART:SM00649
Pfam:PF03946 GO:GO:0006412 GO:GO:0003735 EMBL:AE014186
HOGENOM:HOG000082123 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 RefSeq:XP_001347786.2 ProteinModelPortal:Q8IIQ5
EnsemblProtists:PF11_0113:mRNA GeneID:810662 KEGG:pfa:PF11_0113
EuPathDB:PlasmoDB:PF3D7_1110600 ProtClustDB:CLSZ2433013
GO:GO:0000315 Uniprot:Q8IIQ5
Length = 178
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 46/114 (40%), Positives = 71/114 (62%)
Query: 41 LNLMAFCKDFNARTQKYKPETPMSVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR 100
+N+M F K+FN RT+ P+ VT+ D T+ F +++P+V W++++ A + SS
Sbjct: 31 INMMTFFKEFNDRTKCIAKNVPIQVTLEPLNDRTYRFYLRTPTVVWFIRRCARVPMFSSM 90
Query: 101 PGHVTASTVTLKHIYEIAKVKQSDPYCQYMPLESICKSIIGTAATMGIKVVKEL 154
H T ++TL ++ IAK K+ DP + L+SICK IIGT +MGI+V KEL
Sbjct: 91 AKHNTVGSITLAEVFHIAKCKRMDPPLINLSLKSICKYIIGTCNSMGIRVCKEL 144
>UNIPROTKB|Q8IIQ5 [details] [associations]
symbol:PF11_0113 "Mitochondrial ribosomal protein L11,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000315
"organellar large ribosomal subunit" evidence=ISS]
InterPro:IPR000911 InterPro:IPR020783 Pfam:PF00298 SMART:SM00649
Pfam:PF03946 GO:GO:0006412 GO:GO:0003735 EMBL:AE014186
HOGENOM:HOG000082123 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 RefSeq:XP_001347786.2 ProteinModelPortal:Q8IIQ5
EnsemblProtists:PF11_0113:mRNA GeneID:810662 KEGG:pfa:PF11_0113
EuPathDB:PlasmoDB:PF3D7_1110600 ProtClustDB:CLSZ2433013
GO:GO:0000315 Uniprot:Q8IIQ5
Length = 178
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 46/114 (40%), Positives = 71/114 (62%)
Query: 41 LNLMAFCKDFNARTQKYKPETPMSVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR 100
+N+M F K+FN RT+ P+ VT+ D T+ F +++P+V W++++ A + SS
Sbjct: 31 INMMTFFKEFNDRTKCIAKNVPIQVTLEPLNDRTYRFYLRTPTVVWFIRRCARVPMFSSM 90
Query: 101 PGHVTASTVTLKHIYEIAKVKQSDPYCQYMPLESICKSIIGTAATMGIKVVKEL 154
H T ++TL ++ IAK K+ DP + L+SICK IIGT +MGI+V KEL
Sbjct: 91 AKHNTVGSITLAEVFHIAKCKRMDPPLINLSLKSICKYIIGTCNSMGIRVCKEL 144
>CGD|CAL0000474 [details] [associations]
symbol:MRPL19 species:5476 "Candida albicans" [GO:0005762
"mitochondrial large ribosomal subunit" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR000911 InterPro:IPR006519 InterPro:IPR020783
Pfam:PF00298 SMART:SM00649 CGD:CAL0000474 Pfam:PF03946
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:AACQ01000038
EMBL:AACQ01000037 eggNOG:COG0080 Gene3D:1.10.10.250
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF46906 SUPFAM:SSF54747 TIGRFAMs:TIGR01632
RefSeq:XP_718736.1 RefSeq:XP_718820.1 ProteinModelPortal:Q5AAS9
STRING:Q5AAS9 GeneID:3639497 GeneID:3639577 KEGG:cal:CaO19.13611
KEGG:cal:CaO19.6231 Uniprot:Q5AAS9
Length = 143
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 50/106 (47%), Positives = 67/106 (63%)
Query: 46 FCKDFNARTQKYKPETPMSVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVT 105
FCK+FNART Y P+ V I D TF F +KSP +W L KAAG+E GS +
Sbjct: 37 FCKEFNARTAIYNQGVPIPVIIQVKPDRTFTFEMKSPPTSWLLMKAAGVEKGSGKALKEP 96
Query: 106 ASTVTLKHIYEIAKVKQSDPYCQYMPLESICKSIIGTAATMGIKVV 151
V+LKHI+EIAK+K++D + + L++I S+I TA +GIKVV
Sbjct: 97 VGEVSLKHIWEIAKIKKTDDRHKSVDLKAIVGSVISTAKVVGIKVV 142
>ASPGD|ASPL0000056238 [details] [associations]
symbol:AN0116 species:162425 "Emericella nidulans"
[GO:0006412 "translation" evidence=IEA] [GO:0005762 "mitochondrial
large ribosomal subunit" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000911
InterPro:IPR006519 InterPro:IPR020783 Pfam:PF00298 SMART:SM00649
Pfam:PF03946 EMBL:BN001308 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 EMBL:AACD01000004 eggNOG:COG0080 HOGENOM:HOG000082123
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
TIGRFAMs:TIGR01632 OMA:CKDFNEK OrthoDB:EOG4Q8872 RefSeq:XP_657720.1
ProteinModelPortal:Q5BH64 STRING:Q5BH64
EnsemblFungi:CADANIAT00002631 GeneID:2875895 KEGG:ani:AN0116.2
Uniprot:Q5BH64
Length = 153
Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 46/114 (40%), Positives = 70/114 (61%)
Query: 44 MAFCKDFNARTQKYKPETPMSVTITAFKDNTFEFTVKSPSVTWYLKKAAGIES------G 97
M FCK+FNART P+ +T D +F F +++P+ T+ L +AA +E G
Sbjct: 39 MDFCKEFNARTAHITTGVPIPARVTVRPDRSFHFDLRTPTTTYLLLQAAKVEPRKNRIRG 98
Query: 98 SSRPGHVTASTVTLKHIYEIAKVKQSDPYCQYMPLESICKSIIGTAATMGIKVV 151
+ RPGH ++LKH+YEIAK+KQS+ + LE +CKS++ A ++GI+VV
Sbjct: 99 AQRPGHEFIGKISLKHVYEIAKIKQSETRLSGLSLEGLCKSVMAQAKSVGIQVV 152
>TIGR_CMR|CPS_4773 [details] [associations]
symbol:CPS_4773 "ribosomal protein L11" species:167879
"Colwellia psychrerythraea 34H" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR000911 InterPro:IPR006519 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 GO:GO:0006412 GO:GO:0005840 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0003735 GO:GO:0019843
eggNOG:COG0080 HOGENOM:HOG000082123 KO:K02867 OMA:KQFNAKT
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
TIGRFAMs:TIGR01632 ProtClustDB:PRK00140 HAMAP:MF_00736_B
HSSP:Q5SLP6 RefSeq:YP_271417.1 ProteinModelPortal:Q47UV5 SMR:Q47UV5
STRING:Q47UV5 GeneID:3521266 KEGG:cps:CPS_4773 PATRIC:21472363
BioCyc:CPSY167879:GI48-4779-MONOMER Uniprot:Q47UV5
Length = 142
Score = 227 (85.0 bits), Expect = 6.5e-19, P = 6.5e-19
Identities = 52/140 (37%), Positives = 74/140 (52%)
Query: 11 RPVAATIRLTVXXXXXXXXXXXXXXXXQYRLNLMAFCKDFNARTQKYKPETPMSVTITAF 70
+ V A I+L V Q+ +N+M FCK FNA+T + P+ V IT +
Sbjct: 3 KKVQALIKLQVAAGAANPSPPVGPALGQHGVNIMEFCKAFNAKTDSLEKGAPVPVVITVY 62
Query: 71 KDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDPYCQYM 130
D +F F K+P ++ LKKAAGI+SGS RP TVT + EI K K+ D
Sbjct: 63 SDRSFTFETKTPPASFLLKKAAGIKSGSGRPNTDKVGTVTTAQLEEIVKTKEPDLTAG-- 120
Query: 131 PLESICKSIIGTAATMGIKV 150
LE+ ++I G+A +MG+ V
Sbjct: 121 SLEAAVRTIAGSARSMGLVV 140
>UNIPROTKB|Q9KV34 [details] [associations]
symbol:rplK "50S ribosomal protein L11" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] InterPro:IPR000911 InterPro:IPR006519
InterPro:IPR020783 InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359
SMART:SM00649 Pfam:PF03946 GO:GO:0006412 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
eggNOG:COG0080 KO:K02867 OMA:KQFNAKT Gene3D:1.10.10.250
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF46906 SUPFAM:SSF54747 TIGRFAMs:TIGR01632
ProtClustDB:PRK00140 HAMAP:MF_00736_B PIR:B82338 RefSeq:NP_229978.1
ProteinModelPortal:Q9KV34 SMR:Q9KV34 DNASU:2615090 GeneID:2615090
KEGG:vch:VC0324 PATRIC:20079705 Uniprot:Q9KV34
Length = 142
Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 53/140 (37%), Positives = 75/140 (53%)
Query: 11 RPVAATIRLTVXXXXXXXXXXXXXXXXQYRLNLMAFCKDFNARTQKYKPETPMSVTITAF 70
+ V A ++L V Q +N+M FCK FNART+ + P+ V IT +
Sbjct: 3 KKVEAYVKLQVAAGMANPSPPVGPALGQRGVNIMEFCKAFNARTESLEKGLPIPVVITVY 62
Query: 71 KDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDPYCQYM 130
D +F F K+P + LKKAAGI+SGS+RP T+T I EIA K +D
Sbjct: 63 SDRSFTFETKTPPASVLLKKAAGIKSGSARPNTAKVGTITDAQIQEIAATKAAD--MTGA 120
Query: 131 PLESICKSIIGTAATMGIKV 150
+E++ +SI GTA +MG+ V
Sbjct: 121 DIEAMKRSIAGTARSMGLVV 140
>TIGR_CMR|VC_0324 [details] [associations]
symbol:VC_0324 "ribosomal protein L11" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000911 InterPro:IPR006519 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 GO:GO:0006412 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 eggNOG:COG0080 KO:K02867
OMA:KQFNAKT Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 TIGRFAMs:TIGR01632 ProtClustDB:PRK00140
HAMAP:MF_00736_B PIR:B82338 RefSeq:NP_229978.1
ProteinModelPortal:Q9KV34 SMR:Q9KV34 DNASU:2615090 GeneID:2615090
KEGG:vch:VC0324 PATRIC:20079705 Uniprot:Q9KV34
Length = 142
Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 53/140 (37%), Positives = 75/140 (53%)
Query: 11 RPVAATIRLTVXXXXXXXXXXXXXXXXQYRLNLMAFCKDFNARTQKYKPETPMSVTITAF 70
+ V A ++L V Q +N+M FCK FNART+ + P+ V IT +
Sbjct: 3 KKVEAYVKLQVAAGMANPSPPVGPALGQRGVNIMEFCKAFNARTESLEKGLPIPVVITVY 62
Query: 71 KDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDPYCQYM 130
D +F F K+P + LKKAAGI+SGS+RP T+T I EIA K +D
Sbjct: 63 SDRSFTFETKTPPASVLLKKAAGIKSGSARPNTAKVGTITDAQIQEIAATKAAD--MTGA 120
Query: 131 PLESICKSIIGTAATMGIKV 150
+E++ +SI GTA +MG+ V
Sbjct: 121 DIEAMKRSIAGTARSMGLVV 140
>SGD|S000005129 [details] [associations]
symbol:MRPL19 "Mitochondrial ribosomal protein of the large
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;IDA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA;IDA]
[GO:0005762 "mitochondrial large ribosomal subunit" evidence=IDA]
[GO:0032543 "mitochondrial translation" evidence=IC] [GO:0006412
"translation" evidence=IEA] InterPro:IPR000911 InterPro:IPR006519
InterPro:IPR020783 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
SGD:S000005129 Pfam:PF03946 EMBL:BK006947 GO:GO:0005762
GO:GO:0003735 GO:GO:0032543 eggNOG:COG0080 HOGENOM:HOG000082123
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
TIGRFAMs:TIGR01632 GeneTree:ENSGT00390000003153 OMA:CKDFNEK
OrthoDB:EOG4Q8872 EMBL:Z71461 PIR:S63140 RefSeq:NP_014214.1
ProteinModelPortal:P53875 SMR:P53875 DIP:DIP-6781N IntAct:P53875
MINT:MINT-613200 STRING:P53875 PaxDb:P53875 EnsemblFungi:YNL185C
GeneID:855536 KEGG:sce:YNL185C CYGD:YNL185c NextBio:979595
Genevestigator:P53875 GermOnline:YNL185C Uniprot:P53875
Length = 158
Score = 222 (83.2 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 51/119 (42%), Positives = 70/119 (58%)
Query: 46 FCKDFNARTQKYKPETPMSVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRP--GH 103
FCK+FNAR+ Y+P P+ V IT D TF F +KSP + L KA ++ G +P G
Sbjct: 39 FCKEFNARSANYQPGVPVPVLITIKPDRTFTFEMKSPPTGYLLLKALKMDKGHGQPNVGT 98
Query: 104 VTAST-----------VTLKHIYEIAKVKQSDPYCQYMPLESICKSIIGTAATMGIKVV 151
+ S ++LKH+YEIAK+K+SD + +E I KSI+G A +MGIKVV
Sbjct: 99 MLGSAPAKGPTRALGELSLKHVYEIAKIKKSDERHSLLEMEGIVKSIVGVAKSMGIKVV 157
>TIGR_CMR|SO_0220 [details] [associations]
symbol:SO_0220 "ribosomal protein L11" species:211586
"Shewanella oneidensis MR-1" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000911 InterPro:IPR006519 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 GO:GO:0006412 GO:GO:0005840 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0003735 GO:GO:0019843
eggNOG:COG0080 HOGENOM:HOG000082123 KO:K02867 OMA:KQFNAKT
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
TIGRFAMs:TIGR01632 ProtClustDB:PRK00140 HAMAP:MF_00736_B
RefSeq:NP_715860.1 ProteinModelPortal:Q8EK78 SMR:Q8EK78
GeneID:1168103 KEGG:son:SO_0220 PATRIC:23520133 Uniprot:Q8EK78
Length = 142
Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 51/140 (36%), Positives = 76/140 (54%)
Query: 11 RPVAATIRLTVXXXXXXXXXXXXXXXXQYRLNLMAFCKDFNARTQKYKPETPMSVTITAF 70
+ + A I+L V Q +N+M FCK FNART+K + P+ V IT +
Sbjct: 3 KKIDAYIKLQVKSGSANPSPPVGPALGQKGVNIMEFCKAFNARTEKMEKGMPIPVVITVY 62
Query: 71 KDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDPYCQYM 130
D +F F K+P ++ LK AAG++SGS RP T+ I EIA++K +D
Sbjct: 63 SDRSFTFETKTPPASYLLKTAAGLKSGSPRPNTQKVGTIARAKIQEIAEMKAAD--MTGA 120
Query: 131 PLESICKSIIGTAATMGIKV 150
+E++ +SI GTA +MG+ V
Sbjct: 121 DVEAMTRSIEGTARSMGLVV 140
>TIGR_CMR|SPO_3514 [details] [associations]
symbol:SPO_3514 "ribosomal protein L11" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000911 InterPro:IPR006519 InterPro:IPR020783
Pfam:PF00298 PROSITE:PS00359 SMART:SM00649 Pfam:PF03946
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 GO:GO:0019843 eggNOG:COG0080 HOGENOM:HOG000082123
KO:K02867 OMA:KQFNAKT Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 TIGRFAMs:TIGR01632 ProtClustDB:PRK00140
HAMAP:MF_00736_B HSSP:P29395 RefSeq:YP_168709.1
ProteinModelPortal:Q5LMP9 SMR:Q5LMP9 GeneID:3195557
KEGG:sil:SPO3514 PATRIC:23380499 Uniprot:Q5LMP9
Length = 141
Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 43/113 (38%), Positives = 69/113 (61%)
Query: 38 QYRLNLMAFCKDFNARTQKYKPETPMSVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESG 97
Q +N+M FCK FNA+T + P I+ ++D +F +K+P +++LKKAA I+SG
Sbjct: 30 QRGINIMEFCKAFNAKTADMEVGAPCPTVISYYQDKSFTMDIKTPPASYFLKKAAKIQSG 89
Query: 98 SSRPGHVTASTVTLKHIYEIAKVKQSDPYCQYMPLESICKSIIGTAATMGIKV 150
+++P TA TVT+ I EIA+ K D ++ + I+G+A +MGI+V
Sbjct: 90 ANKPSRETAGTVTVAQIREIAEAKMKDLNAN--DIDGAMQIILGSARSMGIEV 140
>UNIPROTKB|P0A7J7 [details] [associations]
symbol:rplK "50S ribosomal subunit protein L11"
species:83333 "Escherichia coli K-12" [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0015968 "stringent response" evidence=IDA]
[GO:0006415 "translational termination" evidence=IMP] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IDA] [GO:0019843 "rRNA
binding" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000911 InterPro:IPR006519
InterPro:IPR020783 InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359
SMART:SM00649 Pfam:PF03946 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR EMBL:U00006
GO:GO:0003735 GO:GO:0019843 GO:GO:0015968 GO:GO:0006415 PDB:2VHM
PDBsum:2VHM PDB:2RDO PDBsum:2RDO PDB:3EP2 PDB:3EQ3 PDB:3EQ4
PDBsum:3EP2 PDBsum:3EQ3 PDBsum:3EQ4 GO:GO:0022625 EMBL:V00339
PDB:3DEG PDBsum:3DEG EMBL:M30610 eggNOG:COG0080
HOGENOM:HOG000082123 KO:K02867 OMA:KQFNAKT Gene3D:1.10.10.250
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF46906 SUPFAM:SSF54747 TIGRFAMs:TIGR01632 PDB:3J0T
PDB:3J0W PDB:3J0Y PDB:3J11 PDB:3J12 PDB:3J14 PDB:3SGF PDB:3UOS
PDBsum:3J0T PDBsum:3J0W PDBsum:3J0Y PDBsum:3J11 PDBsum:3J12
PDBsum:3J14 PDBsum:3SGF PDBsum:3UOS ProtClustDB:PRK00140
HAMAP:MF_00736_B PIR:S12572 RefSeq:NP_418410.1 RefSeq:YP_491478.1
PDB:1EG0 PDB:1P85 PDB:1P86 PDB:1VS6 PDB:1VS8 PDB:1VT2 PDB:2AW4
PDB:2AWB PDB:2GYA PDB:2GYC PDB:2I2T PDB:2I2V PDB:2J28 PDB:2QAM
PDB:2QAO PDB:2QBA PDB:2QBC PDB:2QBE PDB:2QBG PDB:2QBI PDB:2QBK
PDB:2QOV PDB:2QOX PDB:2QOZ PDB:2QP1 PDB:2VHN PDB:2WWQ PDB:2Z4L
PDB:2Z4N PDB:3DF2 PDB:3DF4 PDB:3E1B PDB:3E1D PDB:3FIK PDB:3I1N
PDB:3I1P PDB:3I1R PDB:3I1T PDB:3I20 PDB:3I22 PDB:3IZT PDB:3IZU
PDB:3J01 PDB:3J0D PDB:3J19 PDB:3KCR PDB:3OAS PDB:3OAT PDB:3OFC
PDB:3OFD PDB:3OFQ PDB:3OFR PDB:3OFZ PDB:3OG0 PDB:3ORB PDB:3R8S
PDB:3R8T PDB:487D PDB:4GAR PDB:4GAU PDBsum:1EG0 PDBsum:1P85
PDBsum:1P86 PDBsum:1VS6 PDBsum:1VS8 PDBsum:1VT2 PDBsum:2AW4
PDBsum:2AWB PDBsum:2GYA PDBsum:2GYC PDBsum:2I2T PDBsum:2I2V
PDBsum:2J28 PDBsum:2QAM PDBsum:2QAO PDBsum:2QBA PDBsum:2QBC
PDBsum:2QBE PDBsum:2QBG PDBsum:2QBI PDBsum:2QBK PDBsum:2QOV
PDBsum:2QOX PDBsum:2QOZ PDBsum:2QP1 PDBsum:2VHN PDBsum:2WWQ
PDBsum:2Z4L PDBsum:2Z4N PDBsum:3DF2 PDBsum:3DF4 PDBsum:3E1B
PDBsum:3E1D PDBsum:3FIK PDBsum:3I1N PDBsum:3I1P PDBsum:3I1R
PDBsum:3I1T PDBsum:3I20 PDBsum:3I22 PDBsum:3IZT PDBsum:3IZU
PDBsum:3J01 PDBsum:3J0D PDBsum:3J19 PDBsum:3KCR PDBsum:3OAS
PDBsum:3OAT PDBsum:3OFC PDBsum:3OFD PDBsum:3OFQ PDBsum:3OFR
PDBsum:3OFZ PDBsum:3OG0 PDBsum:3ORB PDBsum:3R8S PDBsum:3R8T
PDBsum:487D PDBsum:4GAR PDBsum:4GAU ProteinModelPortal:P0A7J7
SMR:P0A7J7 DIP:DIP-35882N IntAct:P0A7J7 MINT:MINT-1232893
PaxDb:P0A7J7 PRIDE:P0A7J7 EnsemblBacteria:EBESCT00000004171
EnsemblBacteria:EBESCT00000015475 GeneID:12930523 GeneID:948484
KEGG:ecj:Y75_p3214 KEGG:eco:b3983 PATRIC:32123487 EchoBASE:EB0865
EcoGene:EG10872 BioCyc:EcoCyc:EG10872-MONOMER
BioCyc:ECOL316407:JW3946-MONOMER EvolutionaryTrace:P0A7J7
Genevestigator:P0A7J7 Uniprot:P0A7J7
Length = 142
Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
Identities = 48/140 (34%), Positives = 72/140 (51%)
Query: 11 RPVAATIRLTVXXXXXXXXXXXXXXXXQYRLNLMAFCKDFNARTQKYKPETPMSVTITAF 70
+ V A ++L V Q +N+M FCK FNA+T + P+ V IT +
Sbjct: 3 KKVQAYVKLQVAAGMANPSPPVGPALGQQGVNIMEFCKAFNAKTDSIEKGLPIPVVITVY 62
Query: 71 KDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDPYCQYM 130
D +F F K+P LKKAAGI+SGS +P ++ + EIA+ K +D
Sbjct: 63 ADRSFTFVTKTPPAAVLLKKAAGIKSGSGKPNKDKVGKISRAQLQEIAQTKAAD--MTGA 120
Query: 131 PLESICKSIIGTAATMGIKV 150
+E++ +SI GTA +MG+ V
Sbjct: 121 DIEAMTRSIEGTARSMGLVV 140
>TIGR_CMR|CHY_2323 [details] [associations]
symbol:CHY_2323 "ribosomal protein L11" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR000911 InterPro:IPR006519
InterPro:IPR020783 InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359
SMART:SM00649 Pfam:PF03946 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
eggNOG:COG0080 KO:K02867 OMA:KQFNAKT Gene3D:1.10.10.250
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF46906 SUPFAM:SSF54747 TIGRFAMs:TIGR01632
ProtClustDB:PRK00140 HAMAP:MF_00736_B RefSeq:YP_361132.1
HSSP:Q5SLP6 ProteinModelPortal:Q3A9Q2 SMR:Q3A9Q2 STRING:Q3A9Q2
GeneID:3726209 KEGG:chy:CHY_2323 PATRIC:21277713
HOGENOM:HOG000082124 BioCyc:CHYD246194:GJCN-2322-MONOMER
Uniprot:Q3A9Q2
Length = 141
Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 50/141 (35%), Positives = 75/141 (53%)
Query: 11 RPVAATIRLTVXXXXXXXXXXXXXXXXQYRLNLMAFCKDFNARTQKYKPETPMSVTITAF 70
+ V A ++L + Q+ +N+MAF K++N RT + + + V IT +
Sbjct: 3 KKVVAVVKLQIPAGKATPAPPVGPALGQHGVNIMAFVKEYNERTAQ-QAGMIIPVEITVY 61
Query: 71 KDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDPYCQYM 130
+D +F F K+P + LKKAAGIESGS +P VT I EIA++K D
Sbjct: 62 EDRSFTFVTKTPPASDLLKKAAGIESGSGQPNKKKVGKVTRAKIREIAELKLKDLNAN-- 119
Query: 131 PLESICKSIIGTAATMGIKVV 151
+E+ + I GTA +MGI+VV
Sbjct: 120 DVEAAMRMIEGTARSMGIEVV 140
>UNIPROTKB|P66056 [details] [associations]
symbol:rplK "50S ribosomal protein L11" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0040007 "growth" evidence=IMP] InterPro:IPR000911
InterPro:IPR006519 InterPro:IPR020783 InterPro:IPR020785
Pfam:PF00298 PROSITE:PS00359 SMART:SM00649 Pfam:PF03946
GO:GO:0040007 GO:GO:0005618 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0006412 GO:GO:0005840 EMBL:BX842574
GO:GO:0003735 GO:GO:0019843 eggNOG:COG0080 HOGENOM:HOG000082123
KO:K02867 OMA:KQFNAKT Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 TIGRFAMs:TIGR01632 ProtClustDB:PRK00140
HAMAP:MF_00736_B PIR:E70613 RefSeq:NP_215154.1 RefSeq:NP_335080.1
RefSeq:YP_006513981.1 ProteinModelPortal:P66056 SMR:P66056
PRIDE:P66056 EnsemblBacteria:EBMYCT00000002861
EnsemblBacteria:EBMYCT00000069820 GeneID:13318526 GeneID:888045
GeneID:925952 KEGG:mtc:MT0669 KEGG:mtu:Rv0640 KEGG:mtv:RVBD_0640
PATRIC:18123193 TubercuList:Rv0640 Uniprot:P66056
Length = 142
Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 46/141 (32%), Positives = 73/141 (51%)
Query: 10 RRPVAATIRLTVXXXXXXXXXXXXXXXXQYRLNLMAFCKDFNARTQKYKPETPMSVTITA 69
++ VA I+L + Q+ +N+M FCK +NA T+ + + V IT
Sbjct: 4 KKKVAGLIKLQIVAGQANPAPPVGPALGQHGVNIMEFCKAYNAATENQRGNV-IPVEITV 62
Query: 70 FKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDPYCQY 129
++D +F FT+K+P L KAAG+ GS+ P + VT + EIA+ K++D
Sbjct: 63 YEDRSFTFTLKTPPAAKLLLKAAGVAKGSAEPHKTKVAKVTWDQVREIAETKKTDLNAN- 121
Query: 130 MPLESICKSIIGTAATMGIKV 150
+++ K I GTA +MGI V
Sbjct: 122 -DVDAAAKIIAGTARSMGITV 141
>TAIR|locus:2037970 [details] [associations]
symbol:PRPL11 "plastid ribosomal protein l11"
species:3702 "Arabidopsis thaliana" [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0022626 "cytosolic ribosome" evidence=IDA]
[GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0010027 "thylakoid membrane organization"
evidence=RCA] [GO:0015995 "chlorophyll biosynthetic process"
evidence=RCA] [GO:0019288 "isopentenyl diphosphate biosynthetic
process, mevalonate-independent pathway" evidence=RCA]
InterPro:IPR000911 InterPro:IPR006519 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009570
GO:GO:0016020 GO:GO:0006412 GO:GO:0009941 GO:GO:0003735
GO:GO:0022626 GO:GO:0019843 EMBL:AC006424 EMBL:AF325023
EMBL:AF412105 EMBL:AF370254 EMBL:AY063070 EMBL:AY085664
IPI:IPI00524837 PIR:E86454 RefSeq:NP_174575.1 UniGene:At.1364
ProteinModelPortal:Q9MAP3 SMR:Q9MAP3 STRING:Q9MAP3 PaxDb:Q9MAP3
PRIDE:Q9MAP3 ProMEX:Q9MAP3 EnsemblPlants:AT1G32990.1 GeneID:840194
KEGG:ath:AT1G32990 GeneFarm:81 TAIR:At1g32990 eggNOG:COG0080
HOGENOM:HOG000082123 InParanoid:Q9MAP3 KO:K02867 OMA:KQFNAKT
PhylomeDB:Q9MAP3 ProtClustDB:CLSN2912775 Genevestigator:Q9MAP3
GermOnline:AT1G32990 Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 TIGRFAMs:TIGR01632 Uniprot:Q9MAP3
Length = 222
Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 46/110 (41%), Positives = 61/110 (55%)
Query: 41 LNLMAFCKDFNARTQKYKPETPMSVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR 100
+N+MAFCKD+NART K + V IT F D +F F +K+P + L KAAG+E GS
Sbjct: 102 VNIMAFCKDYNARTAD-KAGYIIPVEITVFDDKSFTFILKTPPASVLLLKAAGVEKGSKD 160
Query: 101 PGHVTASTVTLKHIYEIAKVKQSDPYCQYMPLESICKSIIGTAATMGIKV 150
P +T+ + IA K D C +ES + I GTAA MGI +
Sbjct: 161 PQQDKVGVITIDQLRTIAAEKLPDLNCT--TIESAMRIIAGTAANMGIDI 208
>TIGR_CMR|GSU_2867 [details] [associations]
symbol:GSU_2867 "ribosomal protein L11" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR000911
InterPro:IPR006519 InterPro:IPR020783 Pfam:PF00298 PROSITE:PS00359
SMART:SM00649 Pfam:PF03946 GO:GO:0006412 GO:GO:0005840
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0003735 GO:GO:0019843
eggNOG:COG0080 HOGENOM:HOG000082123 KO:K02867 OMA:KQFNAKT
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
TIGRFAMs:TIGR01632 ProtClustDB:PRK00140 HAMAP:MF_00736_B
RefSeq:NP_953909.1 ProteinModelPortal:P62434 SMR:P62434
GeneID:2686756 KEGG:gsu:GSU2867 PATRIC:22028585
BioCyc:GSUL243231:GH27-2848-MONOMER Uniprot:P62434
Length = 141
Score = 194 (73.4 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 45/114 (39%), Positives = 67/114 (58%)
Query: 38 QYRLNLMAFCKDFNARTQKYKPETPMSVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESG 97
Q+ +N+M FCK FNA+TQ + T + V IT + D +F F K P ++ +KKA GIESG
Sbjct: 30 QHGVNIMEFCKAFNAKTQADEG-TIIPVVITVYADRSFTFITKVPPMSVLIKKAVGIESG 88
Query: 98 SSRPGHVTASTVTLKHIYEIAKVKQSDPYCQYMPLESICKSIIGTAATMGIKVV 151
SS P +T + + EIA K D LE+ +++ GTA +MG+++V
Sbjct: 89 SSVPNKNKVGKLTREQVREIATKKLPD--MNAASLEAAMRTVEGTARSMGVEIV 140
>TIGR_CMR|ECH_0956 [details] [associations]
symbol:ECH_0956 "ribosomal protein L11" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR000911 InterPro:IPR006519 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 eggNOG:COG0080
HOGENOM:HOG000082123 KO:K02867 Gene3D:1.10.10.250
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF46906 SUPFAM:SSF54747 TIGRFAMs:TIGR01632
ProtClustDB:PRK00140 RefSeq:YP_507744.1 ProteinModelPortal:Q2GFN9
STRING:Q2GFN9 GeneID:3927764 KEGG:ech:ECH_0956 PATRIC:20577294
OMA:KLEFMAM BioCyc:ECHA205920:GJNR-959-MONOMER Uniprot:Q2GFN9
Length = 147
Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 43/112 (38%), Positives = 65/112 (58%)
Query: 46 FCKDFNART----QKYKPETPMSVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRP 101
FCK+FN T ++YK ++ I+ + D ++ FT+ V++ LKKAA I+ GS P
Sbjct: 38 FCKEFNDITSGEGKQYKVGDLVTARISIYNDKSYSFTISDSPVSYLLKKAAAIDKGSVNP 97
Query: 102 GHVTASTVTLKHIYEIAKVKQSDPYCQYMPLESICKSIIGTAATMGIKVVKE 153
G + + +YEIAK K SD +E+ K +IGTA++MGI VV+E
Sbjct: 98 GKDNVGKIKMSAVYEIAKRKMSDMNAD--TVEAAAKMVIGTASSMGIVVVEE 147
>TIGR_CMR|BA_0097 [details] [associations]
symbol:BA_0097 "ribosomal protein L11" species:198094
"Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000911 InterPro:IPR006519 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0019843 eggNOG:COG0080 HOGENOM:HOG000082123 KO:K02867
OMA:KQFNAKT Gene3D:1.10.10.250 Gene3D:3.30.1550.10
InterPro:IPR020784 PANTHER:PTHR11661 SUPFAM:SSF46906
SUPFAM:SSF54747 TIGRFAMs:TIGR01632 RefSeq:NP_842665.1
RefSeq:YP_016700.2 RefSeq:YP_026383.1 ProteinModelPortal:Q81VU3
SMR:Q81VU3 DNASU:1086044 EnsemblBacteria:EBBACT00000008112
EnsemblBacteria:EBBACT00000017784 EnsemblBacteria:EBBACT00000023843
GeneID:1086044 GeneID:2814888 GeneID:2852743 KEGG:ban:BA_0097
KEGG:bar:GBAA_0097 KEGG:bat:BAS0097 ProtClustDB:PRK00140
BioCyc:BANT260799:GJAJ-108-MONOMER
BioCyc:BANT261594:GJ7F-110-MONOMER HAMAP:MF_00736_B Uniprot:Q81VU3
Length = 141
Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 45/113 (39%), Positives = 62/113 (54%)
Query: 38 QYRLNLMAFCKDFNARTQKYKPETPMSVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESG 97
Q +N+M FCK+FNART + + V IT F+D +F F K+P LKK AGIESG
Sbjct: 30 QAGVNIMGFCKEFNARTAD-QAGLIIPVEITVFEDRSFTFITKTPPAAVLLKKVAGIESG 88
Query: 98 SSRPGHVTASTVTLKHIYEIAKVKQSDPYCQYMPLESICKSIIGTAATMGIKV 150
S P +TV + EIA+ K D +E+ + + GTA +MGI +
Sbjct: 89 SGEPNRNKVATVKRDKVREIAETKMPD--LNAASVEAAMRMVEGTARSMGIVI 139
>TIGR_CMR|DET_0993 [details] [associations]
symbol:DET_0993 "ribosomal protein L11" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR000911 InterPro:IPR006519 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0019843
eggNOG:COG0080 HOGENOM:HOG000082123 KO:K02867 OMA:KQFNAKT
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
TIGRFAMs:TIGR01632 ProtClustDB:PRK00140 HAMAP:MF_00736_B
HSSP:Q5SLP6 RefSeq:YP_181716.1 ProteinModelPortal:Q3Z7T3 SMR:Q3Z7T3
STRING:Q3Z7T3 GeneID:3229743 KEGG:det:DET0993 PATRIC:21609035
BioCyc:DETH243164:GJNF-994-MONOMER Uniprot:Q3Z7T3
Length = 140
Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 46/140 (32%), Positives = 69/140 (49%)
Query: 11 RPVAATIRLTVXXXXXXXXXXXXXXXXQYRLNLMAFCKDFNARTQKYKPETPMSVTITAF 70
+ V A ++L + Q+ +N+M FCK++N RT T + IT +
Sbjct: 3 KKVKAIVKLQIPAGKANPAPPIGPALGQHGINIMGFCKEYNDRTASMAG-TIVPAEITIY 61
Query: 71 KDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDPYCQYM 130
D +F F K+P LKKAAG+E+GS P + ++ + EIA VK D +
Sbjct: 62 DDRSFTFITKTPPAADLLKKAAGVEAGSGTPSKSVVAVISKGQLREIASVKMKD--LNAV 119
Query: 131 PLESICKSIIGTAATMGIKV 150
+E + I GTA +MGIKV
Sbjct: 120 NIEGAERIIEGTARSMGIKV 139
>TIGR_CMR|CBU_0226 [details] [associations]
symbol:CBU_0226 "ribosomal protein L11" species:227377
"Coxiella burnetii RSA 493" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] InterPro:IPR000911 InterPro:IPR006519
InterPro:IPR020783 InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359
SMART:SM00649 Pfam:PF03946 GO:GO:0006412 GO:GO:0005840
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0003735 GO:GO:0019843
eggNOG:COG0080 HOGENOM:HOG000082123 KO:K02867 OMA:KQFNAKT
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
TIGRFAMs:TIGR01632 ProtClustDB:PRK00140 HAMAP:MF_00736_B
RefSeq:NP_819270.1 ProteinModelPortal:Q83ET4 SMR:Q83ET4
PRIDE:Q83ET4 GeneID:1208107 KEGG:cbu:CBU_0226 PATRIC:17929143
BioCyc:CBUR227377:GJ7S-232-MONOMER Uniprot:Q83ET4
Length = 145
Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 46/142 (32%), Positives = 67/142 (47%)
Query: 11 RPVAATIRLTVXXXXXXXXXXXXXXXXQYRLNLMAFCKDFNARTQKYKPETPMSVTITAF 70
+ + IRL + Q+ +N+ FC+ FN T+ + P V IT +
Sbjct: 3 KKITGYIRLQIKAGEANPSPPVGPALGQHGVNIREFCESFNTATKNIEKGLPTPVIITVY 62
Query: 71 KDNTFEFTVKSPSVTWYLKKAA--GIESGSSRPGHVTASTVTLKHIYEIAKVKQSDPYCQ 128
D TF F K+P + LKK G +SGS+RP T + + EIAK+K D
Sbjct: 63 ADRTFSFITKTPPASVLLKKFVLKG-KSGSARPNTEKVGKATRQQLEEIAKMKTPD--LT 119
Query: 129 YMPLESICKSIIGTAATMGIKV 150
LE+ ++I GTA +MGI V
Sbjct: 120 AADLEAAIRTIAGTARSMGIDV 141
>TIGR_CMR|APH_1028 [details] [associations]
symbol:APH_1028 "ribosomal protein L11" species:212042
"Anaplasma phagocytophilum HZ" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR000911 InterPro:IPR006519 InterPro:IPR020783
InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359 SMART:SM00649
Pfam:PF03946 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0019843
eggNOG:COG0080 HOGENOM:HOG000082123 KO:K02867 Gene3D:1.10.10.250
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF46906 SUPFAM:SSF54747 TIGRFAMs:TIGR01632
ProtClustDB:PRK00140 OMA:FCKQYNF RefSeq:YP_505587.1
ProteinModelPortal:Q2GJ64 STRING:Q2GJ64 GeneID:3929928
KEGG:aph:APH_1028 PATRIC:20950806
BioCyc:APHA212042:GHPM-1035-MONOMER Uniprot:Q2GJ64
Length = 148
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 36/109 (33%), Positives = 63/109 (57%)
Query: 46 FCKDFNARTQK----YKPETPMSVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRP 101
FC++FN T Y+ ++ I+ + D T+ FT+ V++ L+KAAG+ GSS P
Sbjct: 39 FCREFNEATSAQGTPYEIGDLVTARISVYVDKTYSFTISDSPVSFLLRKAAGLTKGSSAP 98
Query: 102 GHVTASTVTLKHIYEIAKVKQSDPYCQYMPLESICKSIIGTAATMGIKV 150
G + +++ ++ + +IA+ K +D +E+ K +IGTA +MGI V
Sbjct: 99 GKESCASIKMEEVVKIAERKIADMNAD--DIEAAVKMVIGTARSMGITV 145
>TIGR_CMR|CJE_0524 [details] [associations]
symbol:CJE_0524 "ribosomal protein L11" species:195099
"Campylobacter jejuni RM1221" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] InterPro:IPR000911 InterPro:IPR006519
InterPro:IPR020783 InterPro:IPR020785 Pfam:PF00298 PROSITE:PS00359
SMART:SM00649 Pfam:PF03946 GO:GO:0006412 GO:GO:0005840
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0003735 GO:GO:0019843
eggNOG:COG0080 HOGENOM:HOG000082123 KO:K02867 OMA:KQFNAKT
Gene3D:1.10.10.250 Gene3D:3.30.1550.10 InterPro:IPR020784
PANTHER:PTHR11661 SUPFAM:SSF46906 SUPFAM:SSF54747
TIGRFAMs:TIGR01632 ProtClustDB:PRK00140 HAMAP:MF_00736_B
RefSeq:YP_178542.1 HSSP:P29395 ProteinModelPortal:Q5HVZ3 SMR:Q5HVZ3
STRING:Q5HVZ3 GeneID:3231285 KEGG:cjr:CJE0524 PATRIC:20042770
BioCyc:CJEJ195099:GJC0-539-MONOMER Uniprot:Q5HVZ3
Length = 141
Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 43/141 (30%), Positives = 62/141 (43%)
Query: 11 RPVAATIRLTVXXXXXXXXXXXXXXXXQYRLNLMAFCKDFNARTQKYKPETPMSVTITAF 70
+ V I+L + Q +N+M FCK FN RT K + V IT +
Sbjct: 3 KKVVGEIKLQIAATKANPSPPVGPALGQQGVNIMEFCKAFNERT-KDMAGFNIPVVITVY 61
Query: 71 KDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDPYCQYM 130
D +F F K P T +KKAAGI G+ P +T + EI K +D
Sbjct: 62 ADKSFTFITKQPPATDLIKKAAGISKGTDNPLKNKVGKLTRAQVLEIVDKKIAD--LNTK 119
Query: 131 PLESICKSIIGTAATMGIKVV 151
+ K I G+A +MG+++V
Sbjct: 120 DRDQAAKIIAGSARSMGVEIV 140
>TAIR|locus:2153162 [details] [associations]
symbol:AT5G51610 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM]
[GO:0042254 "ribosome biogenesis" evidence=ISS] [GO:0006354
"DNA-dependent transcription, elongation" evidence=RCA]
InterPro:IPR000911 InterPro:IPR020783 InterPro:IPR020785
Pfam:PF00298 PROSITE:PS00359 SMART:SM00649 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:AB018109 eggNOG:COG0080 HOGENOM:HOG000082123 KO:K02867
Gene3D:1.10.10.250 PANTHER:PTHR11661 SUPFAM:SSF46906
IPI:IPI00529938 RefSeq:NP_199974.1 UniGene:At.55491 HSSP:P56210
ProteinModelPortal:Q9FHM3 SMR:Q9FHM3 STRING:Q9FHM3 PaxDb:Q9FHM3
PRIDE:Q9FHM3 EnsemblPlants:AT5G51610.1 GeneID:835235
KEGG:ath:AT5G51610 TAIR:At5g51610 InParanoid:Q9FHM3 OMA:NCTTIVS
PhylomeDB:Q9FHM3 Genevestigator:Q9FHM3 Uniprot:Q9FHM3
Length = 182
Score = 129 (50.5 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 27/79 (34%), Positives = 45/79 (56%)
Query: 72 DNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDPYCQYMP 131
D +F F +K+P ++ L KAAG++ GS P + +T+ + +IA+VK + C
Sbjct: 92 DQSFTFILKTPPTSFLLLKAAGVKKGSKDPKQIKVGMITIDQVRKIAEVKLPELNCT--T 149
Query: 132 LESICKSIIGTAATMGIKV 150
+ S ++I GTA MGI +
Sbjct: 150 IVSTMRTIAGTAGNMGIDI 168
>TIGR_CMR|NSE_0682 [details] [associations]
symbol:NSE_0682 "ribosomal protein L11" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0000315 "organellar
large ribosomal subunit" evidence=ISS] [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR000911 InterPro:IPR020783 Pfam:PF00298
SMART:SM00649 Pfam:PF03946 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0080 HOGENOM:HOG000082123 KO:K02867 Gene3D:1.10.10.250
Gene3D:3.30.1550.10 InterPro:IPR020784 PANTHER:PTHR11661
SUPFAM:SSF46906 SUPFAM:SSF54747 ProtClustDB:PRK00140
RefSeq:YP_506560.1 ProteinModelPortal:Q2GD86 STRING:Q2GD86
GeneID:3931369 KEGG:nse:NSE_0682 PATRIC:22681383 OMA:FCKQYNF
BioCyc:NSEN222891:GHFU-696-MONOMER Uniprot:Q2GD86
Length = 140
Score = 103 (41.3 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 34/140 (24%), Positives = 57/140 (40%)
Query: 11 RPVAATIRLTVXXXXXXXXXXXXXXXXQYRLNLMAFCKDFNARTQKYKPETPMSVTITAF 70
+ V A ++L V +NLM FC+ N T + V + +
Sbjct: 2 KKVVARLKLRVPAGKASPTPAIASSLGPKGVNLMKFCQACNELTGALAGN--IRVRVLVY 59
Query: 71 KDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDPYCQYM 130
+D TF+ V+ + T +K GS+ PG ++V I EIA+ +
Sbjct: 60 QDKTFDVVVRGKNSTDVIKSFLQFSKGSAAPGKSFVASVGQSKISEIAR--ELIGCMNTR 117
Query: 131 PLESICKSIIGTAATMGIKV 150
++ + + G A+MGIKV
Sbjct: 118 NFDAAVRMVTGKVASMGIKV 137
>UNIPROTKB|H0YCD5 [details] [associations]
symbol:MRPL11 "39S ribosomal protein L11, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR020783
Pfam:PF00298 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:AP002748 Gene3D:1.10.10.250 HGNC:HGNC:14042 ChiTaRS:MRPL11
Ensembl:ENST00000528272 Bgee:H0YCD5 Uniprot:H0YCD5
Length = 63
Score = 91 (37.1 bits), Expect = 0.00017, P = 0.00017
Identities = 20/40 (50%), Positives = 31/40 (77%)
Query: 116 EIAKVK-QSDPYC-QYMPLESICKSIIGTAATMGIKVVKE 153
EIA++K Q + + Q +PL S+ +SIIG+A ++GI+VVKE
Sbjct: 1 EIARIKAQDEAFALQDVPLSSVVRSIIGSARSLGIRVVKE 40
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.130 0.372 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 155 139 0.00091 102 3 11 22 0.41 31
30 0.46 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 36
No. of states in DFA: 588 (63 KB)
Total size of DFA: 129 KB (2081 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 12.42u 0.19s 12.61t Elapsed: 00:00:00
Total cpu time: 12.42u 0.19s 12.61t Elapsed: 00:00:00
Start: Thu May 9 19:35:34 2013 End: Thu May 9 19:35:34 2013