BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031693
(155 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9UTK2|RM19_SCHPO 54S ribosomal protein L19, mitochondrial OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=mrpl19 PE=3 SV=1
Length = 144
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 69/135 (51%), Positives = 89/135 (65%)
Query: 17 IRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPETPMSVTITAFKDNTFE 76
I+L VPAG A P PP+GPALG L + FCK+FNART + P TP+ IT TF
Sbjct: 9 IKLIVPAGKATPTPPIGPALGARGLKSIDFCKEFNARTAGWMPNTPVPCKITVTPQRTFT 68
Query: 77 FTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDPYCQYMPLESIC 136
FT+ +P +W + K +E GSS P H ++LKHIYEIAK+K +DP Q + L S+C
Sbjct: 69 FTIHTPPTSWLISKTLDLEKGSSSPLHDIKGQLSLKHIYEIAKLKSTDPSLQGIELLSLC 128
Query: 137 KSIIGTAATMGIKVV 151
KS+IGTA +MG+KVV
Sbjct: 129 KSVIGTAKSMGVKVV 143
>sp|Q9Y3B7|RM11_HUMAN 39S ribosomal protein L11, mitochondrial OS=Homo sapiens GN=MRPL11
PE=1 SV=1
Length = 192
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/148 (46%), Positives = 95/148 (64%), Gaps = 3/148 (2%)
Query: 10 RRP-VAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPETPMSVTIT 68
R+P V IR V AG A P PP+GP LGQ +++ FCK+FN RT+ K P+ I
Sbjct: 12 RKPEVGGVIRAIVRAGLAMPGPPLGPVLGQRGVSINQFCKEFNERTKDIKEGIPLPTKIL 71
Query: 69 AFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDP--Y 126
D TFE + P+V+++LK AAGIE G+ + G A VTLKH+YEIA++K D
Sbjct: 72 VKPDRTFEIKIGQPTVSYFLKAAAGIEKGARQTGKEVAGLVTLKHVYEIARIKAQDEAFA 131
Query: 127 CQYMPLESICKSIIGTAATMGIKVVKEL 154
Q +PL S+ +SIIG+A ++GI+VVK+L
Sbjct: 132 LQDVPLSSVVRSIIGSARSLGIRVVKDL 159
>sp|Q2YDI0|RM11_BOVIN 39S ribosomal protein L11, mitochondrial OS=Bos taurus GN=MRPL11
PE=1 SV=2
Length = 192
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/148 (46%), Positives = 96/148 (64%), Gaps = 3/148 (2%)
Query: 10 RRPVA-ATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPETPMSVTIT 68
R+P A IR + AG A P PP+GP LGQ +++ FCK+FN +T+ K P+ I
Sbjct: 12 RKPEAEGVIRTILRAGQAMPGPPLGPILGQRGVSINQFCKEFNEKTKDIKEGIPLPTKIF 71
Query: 69 AFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVK-QSDPYC 127
D TFE + P+V+++LK AAGIE G+ G A VTLKH+YEIA+VK Q D +
Sbjct: 72 VKPDRTFEIKIGQPTVSYFLKAAAGIEKGARNTGKEVAGLVTLKHVYEIARVKAQDDAFA 131
Query: 128 -QYMPLESICKSIIGTAATMGIKVVKEL 154
Q +PL S+ +SIIG+A ++GI+VVK+L
Sbjct: 132 LQDVPLSSVVRSIIGSARSLGIRVVKDL 159
>sp|A7HWQ0|RL11_PARL1 50S ribosomal protein L11 OS=Parvibaculum lavamentivorans (strain
DS-1 / DSM 13023 / NCIMB 13966) GN=rplK PE=3 SV=1
Length = 142
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/136 (49%), Positives = 90/136 (66%), Gaps = 2/136 (1%)
Query: 17 IRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPETPMSVTITAFKDNTFE 76
I+L VPAG A P+PP+GPALGQ LN+M FCK FNA TQK + P+ V ITAF D +F
Sbjct: 9 IKLQVPAGAANPSPPIGPALGQRGLNIMEFCKAFNAATQKMEQGMPIPVVITAFSDRSFT 68
Query: 77 FTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDPYCQYMPLESIC 136
F +K+P +++LKKAA + SGS PG +A TVT+ EIA+ K +D L+
Sbjct: 69 FAMKTPPASYFLKKAAKVTSGSKTPGRASAGTVTVAQCREIAEAKMAD--LNANDLDQAT 126
Query: 137 KSIIGTAATMGIKVVK 152
K I G+A +MG++VV+
Sbjct: 127 KIIAGSARSMGLQVVE 142
>sp|Q2RQU9|RL11_RHORT 50S ribosomal protein L11 OS=Rhodospirillum rubrum (strain ATCC
11170 / NCIB 8255) GN=rplK PE=3 SV=1
Length = 142
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 65/136 (47%), Positives = 94/136 (69%), Gaps = 2/136 (1%)
Query: 17 IRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPETPMSVTITAFKDNTFE 76
I+L VPAG A P+PP+GPALGQ LN+M FCK FNA TQ +P P+ V ITA+ D TF
Sbjct: 9 IKLQVPAGKANPSPPIGPALGQRGLNIMEFCKAFNAATQGLEPGMPIPVVITAYGDRTFT 68
Query: 77 FTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDPYCQYMPLESIC 136
+ K+P +T++LKKAAGI GS+ PG +A TVT++ + +IA+ K D +E+
Sbjct: 69 YITKTPPMTYFLKKAAGIGKGSTTPGKGSAGTVTMEQVRDIAEKKMPD--LNSPTIEAAV 126
Query: 137 KSIIGTAATMGIKVVK 152
+ ++G+A +MG++VV+
Sbjct: 127 QMVVGSARSMGLQVVE 142
>sp|Q9VFJ2|RM11_DROME 39S ribosomal protein L11, mitochondrial OS=Drosophila melanogaster
GN=mRpL11 PE=1 SV=1
Length = 196
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 97/155 (62%)
Query: 1 MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPE 60
+ +LK+ + R + ++ +PAG A PP+GP LGQ +N+ AFCKDFNA+T + K
Sbjct: 8 LKSLKKTVERVTHTSKLKTNIPAGMAAAGPPLGPMLGQRAINIAAFCKDFNAKTAEMKEG 67
Query: 61 TPMSVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKV 120
P+ I+ D +++ + P T++LK+AAGI+ G+ PG A +TLKH+YEIA +
Sbjct: 68 VPLPCRISVNSDRSYDLAIHHPPATFFLKQAAGIQRGTMTPGKEVAGMITLKHLYEIAAI 127
Query: 121 KQSDPYCQYMPLESICKSIIGTAATMGIKVVKELE 155
K DP + ++ +C+ +I A T GIKVV+E++
Sbjct: 128 KIQDPPNVLLTMQQMCEMLISIARTCGIKVVREID 162
>sp|Q7VRP3|RL11_BLOFL 50S ribosomal protein L11 OS=Blochmannia floridanus GN=rplK PE=3
SV=1
Length = 146
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 65/148 (43%), Positives = 96/148 (64%), Gaps = 2/148 (1%)
Query: 7 ILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPETPMSVT 66
++ ++ V + I+L + A A P+PP+GPALGQ +N+M FCKDFN RT ++ + V
Sbjct: 1 MIVKKKVQSCIKLQIEARSATPSPPIGPALGQQGINIMKFCKDFNTRTADFEMGLILPVV 60
Query: 67 ITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDPY 126
IT + D +F F +K+P+ + LKKAAGI+SGS +P V+ V + IYEIAK+K D
Sbjct: 61 ITVYVDRSFSFVIKTPTAVFLLKKAAGIKSGSEKPKCVSVGKVLISQIYEIAKIKLID-- 118
Query: 127 CQYMPLESICKSIIGTAATMGIKVVKEL 154
+ LES KSI+GTA ++G++V L
Sbjct: 119 MTSLNLESASKSIMGTARSIGLEVEDNL 146
>sp|O67758|RL11_AQUAE 50S ribosomal protein L11 OS=Aquifex aeolicus (strain VF5) GN=rplK
PE=3 SV=1
Length = 145
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 65/140 (46%), Positives = 94/140 (67%), Gaps = 2/140 (1%)
Query: 11 RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPETPMSVTITAF 70
+ V ATI L +PA A PAPPVGPALGQ+ +N+M F K FNA ++ Y+P T + V IT +
Sbjct: 3 KKVVATIELMLPAQQASPAPPVGPALGQHGVNIMEFVKQFNAASRDYEPGTILPVVITVY 62
Query: 71 KDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDPYCQYM 130
+D +F F +K+P V++ LKKAAG+E GSS P V +T+K + EIAK+K D
Sbjct: 63 QDRSFTFIMKTPPVSYLLKKAAGVEKGSSDPKRVKVGKITVKQLEEIAKMKMKD--MNTR 120
Query: 131 PLESICKSIIGTAATMGIKV 150
L++ +++ GTA +MGI++
Sbjct: 121 DLKAAMRTVAGTAKSMGIEI 140
>sp|A5ELP2|RL11_BRASB 50S ribosomal protein L11 OS=Bradyrhizobium sp. (strain BTAi1 /
ATCC BAA-1182) GN=rplK PE=3 SV=1
Length = 142
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/140 (46%), Positives = 92/140 (65%), Gaps = 2/140 (1%)
Query: 11 RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPETPMSVTITAF 70
+ V ++L VPAG A P+PP+GPALGQ LN+M FCK FNA+TQK + TP+ V IT +
Sbjct: 3 KKVTGYLKLQVPAGAANPSPPIGPALGQRGLNIMEFCKAFNAQTQKEEKNTPIPVVITIY 62
Query: 71 KDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDPYCQYM 130
D +F F +K+P ++++LK+AA I+SGS PG A VT + EIA+ K D C
Sbjct: 63 ADRSFTFEMKTPPMSYFLKQAAKIQSGSKAPGRDKAGKVTKAQVREIAEKKMKDLNCDS- 121
Query: 131 PLESICKSIIGTAATMGIKV 150
+ES K + G+A +MG++V
Sbjct: 122 -IESAMKMVEGSARSMGLEV 140
>sp|A4YSH5|RL11_BRASO 50S ribosomal protein L11 OS=Bradyrhizobium sp. (strain ORS278)
GN=rplK PE=3 SV=1
Length = 142
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/140 (46%), Positives = 92/140 (65%), Gaps = 2/140 (1%)
Query: 11 RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPETPMSVTITAF 70
+ V ++L VPAG A P+PP+GPALGQ LN+M FCK FNA+TQK + TP+ V IT +
Sbjct: 3 KKVTGYLKLQVPAGAANPSPPIGPALGQRGLNIMEFCKAFNAQTQKEEKNTPIPVVITIY 62
Query: 71 KDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDPYCQYM 130
D +F F +K+P ++++LK+AA I+SGS PG A VT + EIA+ K D C
Sbjct: 63 ADRSFTFEMKTPPMSFFLKQAAKIQSGSKAPGRDKAGKVTKAQVREIAEKKMKDLNCDS- 121
Query: 131 PLESICKSIIGTAATMGIKV 150
+ES K + G+A +MG++V
Sbjct: 122 -IESAMKMVEGSARSMGLEV 140
>sp|Q2IXS8|RL11_RHOP2 50S ribosomal protein L11 OS=Rhodopseudomonas palustris (strain
HaA2) GN=rplK PE=3 SV=1
Length = 142
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 64/140 (45%), Positives = 93/140 (66%), Gaps = 2/140 (1%)
Query: 11 RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPETPMSVTITAF 70
+ V ++L VPAG A P+PP+GPALGQ LN+M FCK FNA+TQK + TP+ V IT +
Sbjct: 3 KKVTGYLKLQVPAGAANPSPPIGPALGQRGLNIMEFCKAFNAQTQKEEKNTPIPVVITIY 62
Query: 71 KDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDPYCQYM 130
D +F F +K+P ++++LK+AA I+SGS PG +A VT + EIA+ K D C
Sbjct: 63 ADRSFTFEMKTPPMSFFLKQAAKIQSGSKLPGRDSAGKVTSAQVREIAEKKMKDLNCDS- 121
Query: 131 PLESICKSIIGTAATMGIKV 150
+ES + + G+A +MG++V
Sbjct: 122 -IESAMRMVEGSARSMGLQV 140
>sp|Q07KJ7|RL11_RHOP5 50S ribosomal protein L11 OS=Rhodopseudomonas palustris (strain
BisA53) GN=rplK PE=3 SV=1
Length = 142
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 63/140 (45%), Positives = 93/140 (66%), Gaps = 2/140 (1%)
Query: 11 RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPETPMSVTITAF 70
+ V ++L VPAG A P+PP+GPALGQ LN+M FCK+FNA+TQK + TP+ V IT +
Sbjct: 3 KKVTGYLKLQVPAGAANPSPPIGPALGQRGLNIMEFCKNFNAQTQKEEKNTPIPVVITIY 62
Query: 71 KDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDPYCQYM 130
D +F F +K+P ++++LK+AA I+SGS PG A V+ + EIA+ K D C
Sbjct: 63 ADRSFTFEMKTPPMSFFLKQAAKIQSGSKLPGRDVAGKVSSAQVREIAERKMKDLNCDS- 121
Query: 131 PLESICKSIIGTAATMGIKV 150
+ES + + G+A +MG++V
Sbjct: 122 -IESAMRMVEGSARSMGLQV 140
>sp|Q89J69|RL11_BRAJA 50S ribosomal protein L11 OS=Bradyrhizobium japonicum (strain USDA
110) GN=rplK PE=3 SV=1
Length = 142
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/140 (46%), Positives = 92/140 (65%), Gaps = 2/140 (1%)
Query: 11 RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPETPMSVTITAF 70
+ V ++L VPAG A P+PP+GPALGQ LN+M FCK FNA+TQK + TP+ V IT +
Sbjct: 3 KKVTGYLKLQVPAGAANPSPPIGPALGQRGLNIMEFCKAFNAQTQKEEKNTPIPVIITIY 62
Query: 71 KDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDPYCQYM 130
D +F F +K+P ++++LK+AA I+SGS PG A VT + EIA+ K D C
Sbjct: 63 ADRSFTFEMKTPPMSYFLKQAAKIQSGSKAPGRDKAGKVTKAQVREIAEKKMKDLNCDT- 121
Query: 131 PLESICKSIIGTAATMGIKV 150
+ES K + G+A +MG++V
Sbjct: 122 -IESAMKMVEGSARSMGLEV 140
>sp|B0RU93|RL11_XANCB 50S ribosomal protein L11 OS=Xanthomonas campestris pv. campestris
(strain B100) GN=rplK PE=3 SV=1
Length = 142
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/140 (50%), Positives = 87/140 (62%), Gaps = 2/140 (1%)
Query: 11 RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPETPMSVTITAF 70
+ V A I+L V AG A PAPPVGPALGQ LN+M FCK FNA T K +P P V ITA+
Sbjct: 3 KKVVALIKLQVKAGQANPAPPVGPALGQRGLNIMEFCKAFNAATSKLEPGLPTPVIITAY 62
Query: 71 KDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDPYCQYM 130
D TF F KS + LKKAAG+ SGS RP VT K + EIAKVK++D
Sbjct: 63 SDRTFTFITKSTPASVLLKKAAGVSSGSKRPNTDKVGKVTRKQLEEIAKVKEAD--LTAA 120
Query: 131 PLESICKSIIGTAATMGIKV 150
LE+ ++I G+A +MG+ V
Sbjct: 121 ELEAAVRTIAGSARSMGLTV 140
>sp|Q5XIE3|RM11_RAT 39S ribosomal protein L11, mitochondrial OS=Rattus norvegicus
GN=Mrpl11 PE=2 SV=1
Length = 203
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/143 (45%), Positives = 91/143 (63%), Gaps = 2/143 (1%)
Query: 14 AATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPETPMSVTITAFKDN 73
IR V AG A P PP+GP LGQ +++ FCK+FN +T+ K P+ I D
Sbjct: 17 GGVIRSIVRAGQAIPGPPLGPILGQRGVSINQFCKEFNEKTKDIKEGIPLPTKIFIKPDR 76
Query: 74 TFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDP--YCQYMP 131
TFE + P+++++LK AAGIE G+ + G A V+LKH+YEIA+VK D Q +P
Sbjct: 77 TFELKIGQPTISYFLKAAAGIEKGARQTGKEVAGLVSLKHVYEIARVKAKDEAFAMQDVP 136
Query: 132 LESICKSIIGTAATMGIKVVKEL 154
L SI +SIIG+A ++GI+VVK+L
Sbjct: 137 LSSIVRSIIGSARSLGIRVVKDL 159
>sp|B9KBJ9|RL11_THENN 50S ribosomal protein L11 OS=Thermotoga neapolitana (strain ATCC
49049 / DSM 4359 / NS-E) GN=rplK PE=3 SV=1
Length = 141
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/141 (51%), Positives = 91/141 (64%), Gaps = 3/141 (2%)
Query: 11 RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPETPMSVTITAF 70
+ VAA I+L +PAG A PAPPVGPALGQ+ +N+M FCK FNA T K + V IT +
Sbjct: 3 KKVAAQIKLQLPAGKATPAPPVGPALGQHGVNIMEFCKRFNAETAD-KAGMILPVVITVY 61
Query: 71 KDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDPYCQYM 130
+D +F F +K+P ++ LKKAAGIESGSS P VT K I EIAK+K D
Sbjct: 62 EDKSFTFIIKTPPASFLLKKAAGIESGSSEPKRKIVGKVTRKQIEEIAKIKMPD--LNAN 119
Query: 131 PLESICKSIIGTAATMGIKVV 151
LE+ + I GTA +MGI+VV
Sbjct: 120 DLEAAMRIIEGTARSMGIEVV 140
>sp|Q134R3|RL11_RHOPS 50S ribosomal protein L11 OS=Rhodopseudomonas palustris (strain
BisB5) GN=rplK PE=3 SV=1
Length = 142
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/140 (45%), Positives = 93/140 (66%), Gaps = 2/140 (1%)
Query: 11 RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPETPMSVTITAF 70
+ V ++L VPAG A P+PP+GPALGQ LN+M FCK FNA+TQK + TP+ V IT +
Sbjct: 3 KKVTGYLKLQVPAGAANPSPPIGPALGQRGLNIMEFCKAFNAQTQKEEKNTPIPVVITIY 62
Query: 71 KDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDPYCQYM 130
D +F F +K+P ++++LK+AA I+SGS PG +A VT + EIA+ K D C
Sbjct: 63 ADRSFTFELKTPPMSFFLKQAAKIQSGSKLPGRDSAGKVTTAQVREIAEKKMKDLNCDS- 121
Query: 131 PLESICKSIIGTAATMGIKV 150
++S + + G+A +MG++V
Sbjct: 122 -IDSAMRMVEGSARSMGLQV 140
>sp|P60100|RL11_CHRVO 50S ribosomal protein L11 OS=Chromobacterium violaceum (strain ATCC
12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 /
NCTC 9757) GN=rplK PE=3 SV=1
Length = 143
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/140 (47%), Positives = 93/140 (66%), Gaps = 2/140 (1%)
Query: 11 RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPETPMSVTITAF 70
+ + I+L VPAG A P+PP+GPALGQ LN+M FCK FNA+TQ +P P+ V ITA+
Sbjct: 3 KKIVGYIKLQVPAGKANPSPPIGPALGQRGLNIMEFCKAFNAQTQGMEPGMPIPVVITAY 62
Query: 71 KDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDPYCQYM 130
D +F FT+K+P T+ LKKAAGI+SGS++ VT + EIAK KQ+D
Sbjct: 63 ADKSFTFTMKTPPATFLLKKAAGIKSGSAKAHVDKVGKVTRAQLEEIAKTKQAD--LTAA 120
Query: 131 PLESICKSIIGTAATMGIKV 150
L++ ++I G+A +MG++V
Sbjct: 121 DLDAAVRTIAGSARSMGLEV 140
>sp|A4IW95|RL11_FRATW 50S ribosomal protein L11 OS=Francisella tularensis subsp.
tularensis (strain WY96-3418) GN=rplK PE=3 SV=1
Length = 144
Score = 130 bits (327), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 94/143 (65%), Gaps = 2/143 (1%)
Query: 8 LTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPETPMSVTI 67
+ ++ + A I+L V AG A P+PP+GPALGQ+ +N+M FCK+FNA+TQ +P P+ V I
Sbjct: 1 MAKKKIEAIIKLQVAAGKANPSPPIGPALGQHGVNIMGFCKEFNAKTQGMEPGMPIPVEI 60
Query: 68 TAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDPYC 127
+ + D +F F +K+P ++ +KKA ++SGSS+P T+T + EIAKVK DP
Sbjct: 61 SVYSDRSFTFEMKTPPASYLIKKAINVKSGSSKPSKEFVGTITRAQLEEIAKVK--DPDL 118
Query: 128 QYMPLESICKSIIGTAATMGIKV 150
L++ + I G+A +MG+KV
Sbjct: 119 TAADLDAAVRIIAGSARSMGVKV 141
>sp|Q5NID6|RL11_FRATT 50S ribosomal protein L11 OS=Francisella tularensis subsp.
tularensis (strain SCHU S4 / Schu 4) GN=rplK PE=3 SV=1
Length = 144
Score = 130 bits (327), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 94/143 (65%), Gaps = 2/143 (1%)
Query: 8 LTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPETPMSVTI 67
+ ++ + A I+L V AG A P+PP+GPALGQ+ +N+M FCK+FNA+TQ +P P+ V I
Sbjct: 1 MAKKKIEAIIKLQVAAGKANPSPPIGPALGQHGVNIMGFCKEFNAKTQGMEPGMPIPVEI 60
Query: 68 TAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDPYC 127
+ + D +F F +K+P ++ +KKA ++SGSS+P T+T + EIAKVK DP
Sbjct: 61 SVYSDRSFTFEMKTPPASYLIKKAINVKSGSSKPSKEFVGTITRAQLEEIAKVK--DPDL 118
Query: 128 QYMPLESICKSIIGTAATMGIKV 150
L++ + I G+A +MG+KV
Sbjct: 119 TAADLDAAVRIIAGSARSMGVKV 141
>sp|A0Q871|RL11_FRATN 50S ribosomal protein L11 OS=Francisella tularensis subsp. novicida
(strain U112) GN=rplK PE=3 SV=1
Length = 144
Score = 130 bits (327), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 94/143 (65%), Gaps = 2/143 (1%)
Query: 8 LTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPETPMSVTI 67
+ ++ + A I+L V AG A P+PP+GPALGQ+ +N+M FCK+FNA+TQ +P P+ V I
Sbjct: 1 MAKKKIEAIIKLQVAAGKANPSPPIGPALGQHGVNIMGFCKEFNAKTQGMEPGMPIPVEI 60
Query: 68 TAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDPYC 127
+ + D +F F +K+P ++ +KKA ++SGSS+P T+T + EIAKVK DP
Sbjct: 61 SVYSDRSFTFEMKTPPASYLIKKAINVKSGSSKPSKEFVGTITRAQLEEIAKVK--DPDL 118
Query: 128 QYMPLESICKSIIGTAATMGIKV 150
L++ + I G+A +MG+KV
Sbjct: 119 TAADLDAAVRIIAGSARSMGVKV 141
>sp|B2SFD2|RL11_FRATM 50S ribosomal protein L11 OS=Francisella tularensis subsp.
mediasiatica (strain FSC147) GN=rplK PE=3 SV=1
Length = 144
Score = 130 bits (327), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 94/143 (65%), Gaps = 2/143 (1%)
Query: 8 LTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPETPMSVTI 67
+ ++ + A I+L V AG A P+PP+GPALGQ+ +N+M FCK+FNA+TQ +P P+ V I
Sbjct: 1 MAKKKIEAIIKLQVAAGKANPSPPIGPALGQHGVNIMGFCKEFNAKTQGMEPGMPIPVEI 60
Query: 68 TAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDPYC 127
+ + D +F F +K+P ++ +KKA ++SGSS+P T+T + EIAKVK DP
Sbjct: 61 SVYSDRSFTFEMKTPPASYLIKKAINVKSGSSKPSKEFVGTITRAQLEEIAKVK--DPDL 118
Query: 128 QYMPLESICKSIIGTAATMGIKV 150
L++ + I G+A +MG+KV
Sbjct: 119 TAADLDAAVRIIAGSARSMGVKV 141
>sp|Q14JT9|RL11_FRAT1 50S ribosomal protein L11 OS=Francisella tularensis subsp.
tularensis (strain FSC 198) GN=rplK PE=3 SV=1
Length = 144
Score = 130 bits (327), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 94/143 (65%), Gaps = 2/143 (1%)
Query: 8 LTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPETPMSVTI 67
+ ++ + A I+L V AG A P+PP+GPALGQ+ +N+M FCK+FNA+TQ +P P+ V I
Sbjct: 1 MAKKKIEAIIKLQVAAGKANPSPPIGPALGQHGVNIMGFCKEFNAKTQGMEPGMPIPVEI 60
Query: 68 TAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDPYC 127
+ + D +F F +K+P ++ +KKA ++SGSS+P T+T + EIAKVK DP
Sbjct: 61 SVYSDRSFTFEMKTPPASYLIKKAINVKSGSSKPSKEFVGTITRAQLEEIAKVK--DPDL 118
Query: 128 QYMPLESICKSIIGTAATMGIKV 150
L++ + I G+A +MG+KV
Sbjct: 119 TAADLDAAVRIIAGSARSMGVKV 141
>sp|B3QC05|RL11_RHOPT 50S ribosomal protein L11 OS=Rhodopseudomonas palustris (strain
TIE-1) GN=rplK PE=3 SV=1
Length = 142
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 64/140 (45%), Positives = 92/140 (65%), Gaps = 2/140 (1%)
Query: 11 RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPETPMSVTITAF 70
+ V ++L VPAG A P+PP+GPALGQ LN+M FCK FNA+TQK + TP+ V IT +
Sbjct: 3 KKVTGYLKLQVPAGAANPSPPIGPALGQRGLNIMEFCKAFNAQTQKEEKNTPIPVVITIY 62
Query: 71 KDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDPYCQYM 130
D +F F +K+P ++++LK+AA I+SGS PG A VT + EIA+ K D C
Sbjct: 63 ADRSFTFEMKTPPMSYFLKQAAKIQSGSKLPGRDFAGKVTSAQVREIAEKKMKDLNCDT- 121
Query: 131 PLESICKSIIGTAATMGIKV 150
+ES + + G+A +MG++V
Sbjct: 122 -VESAMRMVEGSARSMGLRV 140
>sp|P62441|RL11_RHOPA 50S ribosomal protein L11 OS=Rhodopseudomonas palustris (strain
ATCC BAA-98 / CGA009) GN=rplK PE=1 SV=3
Length = 142
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 64/140 (45%), Positives = 92/140 (65%), Gaps = 2/140 (1%)
Query: 11 RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPETPMSVTITAF 70
+ V ++L VPAG A P+PP+GPALGQ LN+M FCK FNA+TQK + TP+ V IT +
Sbjct: 3 KKVTGYLKLQVPAGAANPSPPIGPALGQRGLNIMEFCKAFNAQTQKEEKNTPIPVVITIY 62
Query: 71 KDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDPYCQYM 130
D +F F +K+P ++++LK+AA I+SGS PG A VT + EIA+ K D C
Sbjct: 63 ADRSFTFEMKTPPMSYFLKQAAKIQSGSKLPGRDFAGKVTSAQVREIAEKKMKDLNCDT- 121
Query: 131 PLESICKSIIGTAATMGIKV 150
+ES + + G+A +MG++V
Sbjct: 122 -VESAMRMVEGSARSMGLRV 140
>sp|B6JER5|RL11_OLICO 50S ribosomal protein L11 OS=Oligotropha carboxidovorans (strain
ATCC 49405 / DSM 1227 / OM5) GN=rplK PE=3 SV=1
Length = 142
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 63/140 (45%), Positives = 93/140 (66%), Gaps = 2/140 (1%)
Query: 11 RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPETPMSVTITAF 70
+ V ++L VPAG A P+PP+GPALGQ LN+M FCK FNA+TQK + TP+ V IT +
Sbjct: 3 KKVTGYLKLQVPAGAANPSPPIGPALGQRGLNIMEFCKAFNAQTQKIEKNTPIPVVITIY 62
Query: 71 KDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDPYCQYM 130
D +F F +K+P ++++LK+AA ++SGS PG +A VT + EIA+ K D C
Sbjct: 63 ADRSFTFEMKTPPMSFFLKQAAKVQSGSKTPGRDSAGKVTKAQVREIAEKKMKDLNCDT- 121
Query: 131 PLESICKSIIGTAATMGIKV 150
+E+ K + G+A +MG++V
Sbjct: 122 -VEAAMKMVEGSARSMGLEV 140
>sp|Q8PNT4|RL11_XANAC 50S ribosomal protein L11 OS=Xanthomonas axonopodis pv. citri
(strain 306) GN=rplK PE=3 SV=1
Length = 142
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 70/140 (50%), Positives = 87/140 (62%), Gaps = 2/140 (1%)
Query: 11 RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPETPMSVTITAF 70
+ + A I+L V AG A PAPPVGPALGQ LN+M FCK FNA T K +P P V ITA+
Sbjct: 3 KKITAFIKLQVKAGQANPAPPVGPALGQRGLNIMEFCKAFNAATSKLEPGLPTPVIITAY 62
Query: 71 KDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDPYCQYM 130
D TF F KS + LKKAAG+ SGS RP VT K + EIAKVK++D
Sbjct: 63 SDRTFTFVTKSTPASVLLKKAAGVSSGSKRPNTDKVGKVTRKQLEEIAKVKEAD--LTAA 120
Query: 131 PLESICKSIIGTAATMGIKV 150
LE+ ++I G+A +MG+ V
Sbjct: 121 ELEAAVRTIAGSARSMGLTV 140
>sp|Q211C4|RL11_RHOPB 50S ribosomal protein L11 OS=Rhodopseudomonas palustris (strain
BisB18) GN=rplK PE=3 SV=1
Length = 142
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 63/140 (45%), Positives = 92/140 (65%), Gaps = 2/140 (1%)
Query: 11 RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPETPMSVTITAF 70
+ V ++L VPAG A P+PP+GPALGQ LN+M FCK FNA+TQK + TP+ V IT +
Sbjct: 3 KKVTGYLKLQVPAGAANPSPPIGPALGQRGLNIMEFCKAFNAQTQKEEKNTPIPVVITIY 62
Query: 71 KDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDPYCQYM 130
D +F F +K+P ++++LK+AA ++SGS PG A VT + EIA+ K D C
Sbjct: 63 ADRSFTFEMKTPPMSFFLKQAANVKSGSKLPGRDVAGKVTSAQVREIAERKMKDLNCDS- 121
Query: 131 PLESICKSIIGTAATMGIKV 150
+E+ K + G+A +MG++V
Sbjct: 122 -IEAAMKMVEGSARSMGLQV 140
>sp|Q0BKC0|RL11_FRATO 50S ribosomal protein L11 OS=Francisella tularensis subsp.
holarctica (strain OSU18) GN=rplK PE=3 SV=1
Length = 144
Score = 130 bits (326), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 94/143 (65%), Gaps = 2/143 (1%)
Query: 8 LTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPETPMSVTI 67
+ ++ + A I+L V AG A P+PP+GPALGQ+ +N+M FCK+FNA+TQ +P P+ V I
Sbjct: 1 MAKKKIEAIIKLQVAAGKANPSPPIGPALGQHGVNIMGFCKEFNAKTQGMEPGMPIPVEI 60
Query: 68 TAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDPYC 127
+ + D +F F +K+P ++ +KKA ++SGSS+P T+T + EIAKVK DP
Sbjct: 61 SVYSDRSFTFEMKTPPASYLIKKAINVKSGSSKPSKEFIGTITRAQLEEIAKVK--DPDL 118
Query: 128 QYMPLESICKSIIGTAATMGIKV 150
L++ + I G+A +MG+KV
Sbjct: 119 TAADLDAAVRIIAGSARSMGVKV 141
>sp|Q2A1M3|RL11_FRATH 50S ribosomal protein L11 OS=Francisella tularensis subsp.
holarctica (strain LVS) GN=rplK PE=3 SV=1
Length = 144
Score = 130 bits (326), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 94/143 (65%), Gaps = 2/143 (1%)
Query: 8 LTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPETPMSVTI 67
+ ++ + A I+L V AG A P+PP+GPALGQ+ +N+M FCK+FNA+TQ +P P+ V I
Sbjct: 1 MAKKKIEAIIKLQVAAGKANPSPPIGPALGQHGVNIMGFCKEFNAKTQGMEPGMPIPVEI 60
Query: 68 TAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDPYC 127
+ + D +F F +K+P ++ +KKA ++SGSS+P T+T + EIAKVK DP
Sbjct: 61 SVYSDRSFTFEMKTPPASYLIKKAINVKSGSSKPSKEFIGTITRAQLEEIAKVK--DPDL 118
Query: 128 QYMPLESICKSIIGTAATMGIKV 150
L++ + I G+A +MG+KV
Sbjct: 119 TAADLDAAVRIIAGSARSMGVKV 141
>sp|A7NEC4|RL11_FRATF 50S ribosomal protein L11 OS=Francisella tularensis subsp.
holarctica (strain FTNF002-00 / FTA) GN=rplK PE=3 SV=1
Length = 144
Score = 130 bits (326), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 94/143 (65%), Gaps = 2/143 (1%)
Query: 8 LTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPETPMSVTI 67
+ ++ + A I+L V AG A P+PP+GPALGQ+ +N+M FCK+FNA+TQ +P P+ V I
Sbjct: 1 MAKKKIEAIIKLQVAAGKANPSPPIGPALGQHGVNIMGFCKEFNAKTQGMEPGMPIPVEI 60
Query: 68 TAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDPYC 127
+ + D +F F +K+P ++ +KKA ++SGSS+P T+T + EIAKVK DP
Sbjct: 61 SVYSDRSFTFEMKTPPASYLIKKAINVKSGSSKPSKEFIGTITRAQLEEIAKVK--DPDL 118
Query: 128 QYMPLESICKSIIGTAATMGIKV 150
L++ + I G+A +MG+KV
Sbjct: 119 TAADLDAAVRIIAGSARSMGVKV 141
>sp|C1DKK1|RL11_AZOVD 50S ribosomal protein L11 OS=Azotobacter vinelandii (strain DJ /
ATCC BAA-1303) GN=rplK PE=3 SV=1
Length = 143
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 68/140 (48%), Positives = 87/140 (62%), Gaps = 2/140 (1%)
Query: 11 RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPETPMSVTITAF 70
+ + A I+L V AG A P+PPVGPALGQ+ +N+M FCK FNARTQ +P P V IT +
Sbjct: 3 KKIQAYIKLQVKAGQANPSPPVGPALGQHGVNIMEFCKAFNARTQGMEPGLPTPVIITVY 62
Query: 71 KDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDPYCQYM 130
D +F F KS + LKKAAGI SGSSRP TV + EIAK KQ+D
Sbjct: 63 SDRSFTFETKSTPASVLLKKAAGISSGSSRPNTQKVGTVNRAQLEEIAKAKQAD--LTAA 120
Query: 131 PLESICKSIIGTAATMGIKV 150
LE+ ++I G+A +MG+ V
Sbjct: 121 DLEAAVRTIAGSARSMGLNV 140
>sp|Q8RTJ5|RL11_XANCP 50S ribosomal protein L11 OS=Xanthomonas campestris pv. campestris
(strain ATCC 33913 / NCPPB 528 / LMG 568) GN=rplK PE=3
SV=1
Length = 142
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 70/140 (50%), Positives = 86/140 (61%), Gaps = 2/140 (1%)
Query: 11 RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPETPMSVTITAF 70
+ V A I+L V AG A PAPPVGPALGQ LN+M FCK FNA T K +P P V ITA+
Sbjct: 3 KKVVALIKLQVKAGQANPAPPVGPALGQRGLNIMEFCKAFNAATSKLEPGLPTPVIITAY 62
Query: 71 KDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDPYCQYM 130
D TF F KS + LKKAAG+ SGS RP VT K + EI KVK++D
Sbjct: 63 SDRTFTFITKSTPASVLLKKAAGVSSGSKRPNTDKVGKVTRKQLEEIVKVKEAD--LTAA 120
Query: 131 PLESICKSIIGTAATMGIKV 150
LE+ ++I G+A +MG+ V
Sbjct: 121 ELEAAVRTIAGSARSMGLTV 140
>sp|Q4URC8|RL11_XANC8 50S ribosomal protein L11 OS=Xanthomonas campestris pv. campestris
(strain 8004) GN=rplK PE=3 SV=1
Length = 142
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 70/140 (50%), Positives = 86/140 (61%), Gaps = 2/140 (1%)
Query: 11 RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPETPMSVTITAF 70
+ V A I+L V AG A PAPPVGPALGQ LN+M FCK FNA T K +P P V ITA+
Sbjct: 3 KKVVALIKLQVKAGQANPAPPVGPALGQRGLNIMEFCKAFNAATSKLEPGLPTPVIITAY 62
Query: 71 KDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDPYCQYM 130
D TF F KS + LKKAAG+ SGS RP VT K + EI KVK++D
Sbjct: 63 SDRTFTFITKSTPASVLLKKAAGVSSGSKRPNTDKVGKVTRKQLEEIVKVKEAD--LTAA 120
Query: 131 PLESICKSIIGTAATMGIKV 150
LE+ ++I G+A +MG+ V
Sbjct: 121 ELEAAVRTIAGSARSMGLTV 140
>sp|Q3BWZ5|RL11_XANC5 50S ribosomal protein L11 OS=Xanthomonas campestris pv. vesicatoria
(strain 85-10) GN=rplK PE=3 SV=1
Length = 142
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 70/140 (50%), Positives = 87/140 (62%), Gaps = 2/140 (1%)
Query: 11 RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPETPMSVTITAF 70
+ + A I+L V AG A PAPPVGPALGQ LN+M FCK FNA T K +P P V ITA+
Sbjct: 3 KKITAFIKLQVKAGQANPAPPVGPALGQRGLNIMEFCKAFNAATSKLEPGLPTPVIITAY 62
Query: 71 KDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDPYCQYM 130
D TF F KS + LKKAAG+ SGS RP VT K + EIAKVK++D
Sbjct: 63 SDRTFTFVTKSTPASVLLKKAAGVTSGSKRPNTDKVGKVTRKQLEEIAKVKEAD--LTAA 120
Query: 131 PLESICKSIIGTAATMGIKV 150
LE+ ++I G+A +MG+ V
Sbjct: 121 ELEAAVRTIAGSARSMGLTV 140
>sp|Q3SSY4|RL11_NITWN 50S ribosomal protein L11 OS=Nitrobacter winogradskyi (strain
Nb-255 / ATCC 25391) GN=rplK PE=3 SV=1
Length = 142
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 63/142 (44%), Positives = 92/142 (64%), Gaps = 2/142 (1%)
Query: 11 RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPETPMSVTITAF 70
+ V ++L VPAG A P+PP+GPALGQ LN+M FCK FNA+TQK + TP+ V IT +
Sbjct: 3 KKVTGYLKLQVPAGAANPSPPIGPALGQRGLNIMEFCKAFNAQTQKEEKNTPIPVVITIY 62
Query: 71 KDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDPYCQYM 130
D +F F +K+P + ++LK+AA I+SGS PG A T+T + EIA+ K D C
Sbjct: 63 ADRSFTFEMKTPPMAYFLKQAAKIQSGSKTPGRDAAGTLTRAQVREIAEKKMKDLNCDT- 121
Query: 131 PLESICKSIIGTAATMGIKVVK 152
+E+ + G+A +MG++V +
Sbjct: 122 -VEAAMSMVEGSARSMGLQVAE 142
>sp|Q8G065|RL11_BRUSU 50S ribosomal protein L11 OS=Brucella suis biovar 1 (strain 1330)
GN=rplK PE=3 SV=1
Length = 142
Score = 129 bits (324), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 62/141 (43%), Positives = 94/141 (66%), Gaps = 2/141 (1%)
Query: 11 RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPETPMSVTITAF 70
+ VA ++L VPAG A P+PP+GPALGQ +N+M FCK FNA +Q+ + +P+ V IT +
Sbjct: 3 KKVAGQLKLQVPAGAANPSPPIGPALGQRGINIMEFCKAFNAASQEMEKGSPIPVLITYY 62
Query: 71 KDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDPYCQYM 130
+D +F F +K+P VT++LKKAA ++SGS PG +A T+T + IA+ K D
Sbjct: 63 QDKSFTFVMKTPPVTYFLKKAANLKSGSKTPGKASAGTITRDKVRAIAEAKMKD--LNAA 120
Query: 131 PLESICKSIIGTAATMGIKVV 151
+E+ + I G+A +MG++VV
Sbjct: 121 DVEAAMRMIEGSARSMGLEVV 141
>sp|B0CH45|RL11_BRUSI 50S ribosomal protein L11 OS=Brucella suis (strain ATCC 23445 /
NCTC 10510) GN=rplK PE=3 SV=1
Length = 142
Score = 129 bits (324), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 62/141 (43%), Positives = 94/141 (66%), Gaps = 2/141 (1%)
Query: 11 RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPETPMSVTITAF 70
+ VA ++L VPAG A P+PP+GPALGQ +N+M FCK FNA +Q+ + +P+ V IT +
Sbjct: 3 KKVAGQLKLQVPAGAANPSPPIGPALGQRGINIMEFCKAFNAASQEMEKGSPIPVLITYY 62
Query: 71 KDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDPYCQYM 130
+D +F F +K+P VT++LKKAA ++SGS PG +A T+T + IA+ K D
Sbjct: 63 QDKSFTFVMKTPPVTYFLKKAANLKSGSKTPGKASAGTITRDKVRAIAEAKMKD--LNAA 120
Query: 131 PLESICKSIIGTAATMGIKVV 151
+E+ + I G+A +MG++VV
Sbjct: 121 DVEAAMRMIEGSARSMGLEVV 141
>sp|Q8YHQ1|RL11_BRUME 50S ribosomal protein L11 OS=Brucella melitensis biotype 1 (strain
16M / ATCC 23456 / NCTC 10094) GN=rplK PE=3 SV=1
Length = 142
Score = 129 bits (324), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 62/141 (43%), Positives = 94/141 (66%), Gaps = 2/141 (1%)
Query: 11 RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPETPMSVTITAF 70
+ VA ++L VPAG A P+PP+GPALGQ +N+M FCK FNA +Q+ + +P+ V IT +
Sbjct: 3 KKVAGQLKLQVPAGAANPSPPIGPALGQRGINIMEFCKAFNAASQEMEKGSPIPVLITYY 62
Query: 71 KDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDPYCQYM 130
+D +F F +K+P VT++LKKAA ++SGS PG +A T+T + IA+ K D
Sbjct: 63 QDKSFTFVMKTPPVTYFLKKAANLKSGSKTPGKASAGTITRDKVRAIAEAKMKD--LNAA 120
Query: 131 PLESICKSIIGTAATMGIKVV 151
+E+ + I G+A +MG++VV
Sbjct: 121 DVEAAMRMIEGSARSMGLEVV 141
>sp|C0RJL5|RL11_BRUMB 50S ribosomal protein L11 OS=Brucella melitensis biotype 2 (strain
ATCC 23457) GN=rplK PE=3 SV=1
Length = 142
Score = 129 bits (324), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 62/141 (43%), Positives = 94/141 (66%), Gaps = 2/141 (1%)
Query: 11 RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPETPMSVTITAF 70
+ VA ++L VPAG A P+PP+GPALGQ +N+M FCK FNA +Q+ + +P+ V IT +
Sbjct: 3 KKVAGQLKLQVPAGAANPSPPIGPALGQRGINIMEFCKAFNAASQEMEKGSPIPVLITYY 62
Query: 71 KDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDPYCQYM 130
+D +F F +K+P VT++LKKAA ++SGS PG +A T+T + IA+ K D
Sbjct: 63 QDKSFTFVMKTPPVTYFLKKAANLKSGSKTPGKASAGTITRDKVRAIAEAKMKD--LNAA 120
Query: 131 PLESICKSIIGTAATMGIKVV 151
+E+ + I G+A +MG++VV
Sbjct: 121 DVEAAMRMIEGSARSMGLEVV 141
>sp|A9M5R4|RL11_BRUC2 50S ribosomal protein L11 OS=Brucella canis (strain ATCC 23365 /
NCTC 10854) GN=rplK PE=3 SV=1
Length = 142
Score = 129 bits (324), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 62/141 (43%), Positives = 94/141 (66%), Gaps = 2/141 (1%)
Query: 11 RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPETPMSVTITAF 70
+ VA ++L VPAG A P+PP+GPALGQ +N+M FCK FNA +Q+ + +P+ V IT +
Sbjct: 3 KKVAGQLKLQVPAGAANPSPPIGPALGQRGINIMEFCKAFNAASQEMEKGSPIPVLITYY 62
Query: 71 KDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDPYCQYM 130
+D +F F +K+P VT++LKKAA ++SGS PG +A T+T + IA+ K D
Sbjct: 63 QDKSFTFVMKTPPVTYFLKKAANLKSGSKTPGKASAGTITRDKVRAIAEAKMKD--LNAA 120
Query: 131 PLESICKSIIGTAATMGIKVV 151
+E+ + I G+A +MG++VV
Sbjct: 121 DVEAAMRMIEGSARSMGLEVV 141
>sp|Q57CP4|RL11_BRUAB 50S ribosomal protein L11 OS=Brucella abortus biovar 1 (strain
9-941) GN=rplK PE=3 SV=1
Length = 142
Score = 129 bits (324), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 62/141 (43%), Positives = 94/141 (66%), Gaps = 2/141 (1%)
Query: 11 RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPETPMSVTITAF 70
+ VA ++L VPAG A P+PP+GPALGQ +N+M FCK FNA +Q+ + +P+ V IT +
Sbjct: 3 KKVAGQLKLQVPAGAANPSPPIGPALGQRGINIMEFCKAFNAASQEMEKGSPIPVLITYY 62
Query: 71 KDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDPYCQYM 130
+D +F F +K+P VT++LKKAA ++SGS PG +A T+T + IA+ K D
Sbjct: 63 QDKSFTFVMKTPPVTYFLKKAANLKSGSKTPGKASAGTITRDKVRAIAEAKMKD--LNAA 120
Query: 131 PLESICKSIIGTAATMGIKVV 151
+E+ + I G+A +MG++VV
Sbjct: 121 DVEAAMRMIEGSARSMGLEVV 141
>sp|Q2YM11|RL11_BRUA2 50S ribosomal protein L11 OS=Brucella abortus (strain 2308) GN=rplK
PE=3 SV=1
Length = 142
Score = 129 bits (324), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 62/141 (43%), Positives = 94/141 (66%), Gaps = 2/141 (1%)
Query: 11 RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPETPMSVTITAF 70
+ VA ++L VPAG A P+PP+GPALGQ +N+M FCK FNA +Q+ + +P+ V IT +
Sbjct: 3 KKVAGQLKLQVPAGAANPSPPIGPALGQRGINIMEFCKAFNAASQEMEKGSPIPVLITYY 62
Query: 71 KDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDPYCQYM 130
+D +F F +K+P VT++LKKAA ++SGS PG +A T+T + IA+ K D
Sbjct: 63 QDKSFTFVMKTPPVTYFLKKAANLKSGSKTPGKASAGTITRDKVRAIAEAKMKD--LNAA 120
Query: 131 PLESICKSIIGTAATMGIKVV 151
+E+ + I G+A +MG++VV
Sbjct: 121 DVEAAMRMIEGSARSMGLEVV 141
>sp|B2S691|RL11_BRUA1 50S ribosomal protein L11 OS=Brucella abortus (strain S19) GN=rplK
PE=3 SV=1
Length = 142
Score = 129 bits (324), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 62/141 (43%), Positives = 94/141 (66%), Gaps = 2/141 (1%)
Query: 11 RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPETPMSVTITAF 70
+ VA ++L VPAG A P+PP+GPALGQ +N+M FCK FNA +Q+ + +P+ V IT +
Sbjct: 3 KKVAGQLKLQVPAGAANPSPPIGPALGQRGINIMEFCKAFNAASQEMEKGSPIPVLITYY 62
Query: 71 KDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDPYCQYM 130
+D +F F +K+P VT++LKKAA ++SGS PG +A T+T + IA+ K D
Sbjct: 63 QDKSFTFVMKTPPVTYFLKKAANLKSGSKTPGKASAGTITRDKVRAIAEAKMKD--LNAA 120
Query: 131 PLESICKSIIGTAATMGIKVV 151
+E+ + I G+A +MG++VV
Sbjct: 121 DVEAAMRMIEGSARSMGLEVV 141
>sp|B1L939|RL11_THESQ 50S ribosomal protein L11 OS=Thermotoga sp. (strain RQ2) GN=rplK
PE=3 SV=1
Length = 141
Score = 129 bits (324), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 72/141 (51%), Positives = 89/141 (63%), Gaps = 3/141 (2%)
Query: 11 RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPETPMSVTITAF 70
+ VAA I+L +PAG A PAPPVGPALGQ+ +N+M FCK FNA T K + V IT +
Sbjct: 3 KKVAAQIKLQLPAGKATPAPPVGPALGQHGVNIMEFCKRFNAETAD-KAGMILPVVITVY 61
Query: 71 KDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDPYCQYM 130
+D +F F +K+P ++ LKKAAGIE GSS P VT K I EIAK K D
Sbjct: 62 EDKSFTFIIKTPPASFLLKKAAGIEKGSSEPKRKIVGKVTRKQIEEIAKTKMPDLNANS- 120
Query: 131 PLESICKSIIGTAATMGIKVV 151
LE+ K I GTA +MGI+VV
Sbjct: 121 -LEAAMKIIEGTAKSMGIEVV 140
>sp|P29395|RL11_THEMA 50S ribosomal protein L11 OS=Thermotoga maritima (strain ATCC 43589
/ MSB8 / DSM 3109 / JCM 10099) GN=rplK PE=1 SV=3
Length = 141
Score = 129 bits (324), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 72/141 (51%), Positives = 89/141 (63%), Gaps = 3/141 (2%)
Query: 11 RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPETPMSVTITAF 70
+ VAA I+L +PAG A PAPPVGPALGQ+ +N+M FCK FNA T K + V IT +
Sbjct: 3 KKVAAQIKLQLPAGKATPAPPVGPALGQHGVNIMEFCKRFNAETAD-KAGMILPVVITVY 61
Query: 71 KDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDPYCQYM 130
+D +F F +K+P ++ LKKAAGIE GSS P VT K I EIAK K D
Sbjct: 62 EDKSFTFIIKTPPASFLLKKAAGIEKGSSEPKRKIVGKVTRKQIEEIAKTKMPDLNANS- 120
Query: 131 PLESICKSIIGTAATMGIKVV 151
LE+ K I GTA +MGI+VV
Sbjct: 121 -LEAAMKIIEGTAKSMGIEVV 140
>sp|Q1QN48|RL11_NITHX 50S ribosomal protein L11 OS=Nitrobacter hamburgensis (strain X14 /
DSM 10229) GN=rplK PE=3 SV=1
Length = 142
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 63/142 (44%), Positives = 92/142 (64%), Gaps = 2/142 (1%)
Query: 11 RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPETPMSVTITAF 70
+ V ++L VPAG A P+PP+GPALGQ LN+M FCK FNA+TQK + TP+ V IT +
Sbjct: 3 KKVTGYLKLQVPAGAANPSPPIGPALGQRGLNIMEFCKAFNAQTQKEEKNTPIPVVITIY 62
Query: 71 KDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDPYCQYM 130
D +F F +K+P + ++LK+AA I+SGS PG +A VT + EIA+ K D C
Sbjct: 63 ADRSFTFEMKTPPMAYFLKQAAKIQSGSKAPGRDSAGQVTKAQVREIAEKKMKDLNCDT- 121
Query: 131 PLESICKSIIGTAATMGIKVVK 152
+E+ + G+A +MG++V +
Sbjct: 122 -VEAAMSMVEGSARSMGLQVAE 142
>sp|A4VHL9|RL11_PSEU5 50S ribosomal protein L11 OS=Pseudomonas stutzeri (strain A1501)
GN=rplK PE=3 SV=1
Length = 143
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 68/140 (48%), Positives = 87/140 (62%), Gaps = 2/140 (1%)
Query: 11 RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPETPMSVTITAF 70
+ + A I+L V AG A P+PPVGPALGQ+ +N+M FCK FNARTQ +P P V IT +
Sbjct: 3 KKIQAYIKLQVKAGQANPSPPVGPALGQHGVNIMEFCKAFNARTQGQEPGLPTPVIITVY 62
Query: 71 KDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDPYCQYM 130
D +F F KS LKKAAGI SGS+RP TVT + EIAK KQ+D M
Sbjct: 63 SDRSFTFETKSTPAAVLLKKAAGITSGSARPNTQKVGTVTRAQLEEIAKAKQADLTAAEM 122
Query: 131 PLESICKSIIGTAATMGIKV 150
E+ ++I G+A +MG+ V
Sbjct: 123 --EAAVRTIAGSARSMGLNV 140
>sp|A8LLJ9|RL11_DINSH 50S ribosomal protein L11 OS=Dinoroseobacter shibae (strain DFL 12)
GN=rplK PE=3 SV=1
Length = 141
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/140 (45%), Positives = 90/140 (64%), Gaps = 2/140 (1%)
Query: 11 RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPETPMSVTITAF 70
+ +A T++L VPAG A P+PPVGPALGQ +N+M FCK FNA+TQ +P P IT +
Sbjct: 3 KKLAGTMKLQVPAGQANPSPPVGPALGQRGINIMEFCKAFNAKTQDMEPGAPCPTVITYY 62
Query: 71 KDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDPYCQYM 130
+D +F +K+P +YLKKAA ++SG+S P T TVT+ + EIA+ K D
Sbjct: 63 QDKSFTMEIKTPPAAYYLKKAAKVKSGASTPSRQTVGTVTVAQVREIAEAKMRD--LNAN 120
Query: 131 PLESICKSIIGTAATMGIKV 150
+E K ++G+A +MGI+V
Sbjct: 121 DIEGAMKIVLGSARSMGIEV 140
>sp|Q1IFX7|RL11_PSEE4 50S ribosomal protein L11 OS=Pseudomonas entomophila (strain L48)
GN=rplK PE=3 SV=1
Length = 143
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/140 (47%), Positives = 89/140 (63%), Gaps = 2/140 (1%)
Query: 11 RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPETPMSVTITAF 70
+ + A I+L V AG A P+PPVGPALGQ+ +N+M FCK FNARTQ +P P V IT +
Sbjct: 3 KKIQAYIKLQVKAGQANPSPPVGPALGQHGVNIMEFCKAFNARTQGQEPGLPTPVIITVY 62
Query: 71 KDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVTASTVTLKHIYEIAKVKQSDPYCQYM 130
D +F F KS + LKKAAG+ SGS+RP V TVT + +IAK KQ+D
Sbjct: 63 SDRSFTFETKSTPASVLLKKAAGLTSGSARPNTVKVGTVTRAQLEDIAKAKQAD--LTAA 120
Query: 131 PLESICKSIIGTAATMGIKV 150
L++ ++I G+A +MG+ V
Sbjct: 121 DLDAAVRTIAGSARSMGLNV 140
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.131 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,602,882
Number of Sequences: 539616
Number of extensions: 2024655
Number of successful extensions: 6641
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 864
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 4819
Number of HSP's gapped (non-prelim): 876
length of query: 155
length of database: 191,569,459
effective HSP length: 107
effective length of query: 48
effective length of database: 133,830,547
effective search space: 6423866256
effective search space used: 6423866256
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)