Query 031694
Match_columns 155
No_of_seqs 101 out of 111
Neff 5.0
Searched_HMMs 29240
Date Mon Mar 25 05:56:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031694.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031694hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3idu_A Uncharacterized protein 98.0 7.4E-05 2.5E-09 56.0 11.2 86 22-118 10-96 (127)
2 2l0d_A Cell surface protein; s 97.4 0.0019 6.5E-08 47.6 10.0 76 29-117 3-83 (114)
3 3hrz_B Cobra venom factor; ser 95.3 0.12 4.2E-06 41.8 9.8 74 39-116 89-164 (252)
4 2xzz_A Protein-glutamine gamma 95.2 0.04 1.4E-06 39.5 5.7 77 39-125 13-89 (102)
5 2kut_A Uncharacterized protein 95.2 0.031 1.1E-06 41.6 5.3 73 38-117 8-91 (122)
6 2x3c_A Toxic extracellular end 95.1 0.025 8.6E-07 48.4 5.2 59 47-105 36-110 (343)
7 1yew_A Particulate methane mon 92.4 0.91 3.1E-05 39.7 9.9 75 29-106 247-336 (382)
8 3isy_A Bsupi, intracellular pr 91.9 0.69 2.3E-05 34.2 7.5 77 44-126 16-106 (120)
9 2e6j_A Hydin protein; PAPD, st 91.5 0.32 1.1E-05 33.5 5.0 82 27-115 6-89 (112)
10 2ys4_A Hydrocephalus-inducing 91.2 0.69 2.4E-05 32.9 6.7 84 26-121 21-104 (122)
11 1ex0_A Coagulation factor XIII 90.2 2.9 9.9E-05 39.3 11.5 89 28-126 616-714 (731)
12 1vjj_A Protein-glutamine gluta 90.0 1.1 3.6E-05 42.0 8.4 87 31-126 583-679 (692)
13 2qsv_A Uncharacterized protein 89.3 1.5 5.1E-05 34.2 7.7 80 27-118 116-202 (220)
14 3rfr_A PMOB; membrane, oxidore 88.6 1.5 5E-05 38.8 7.8 73 31-106 283-368 (419)
15 1g0d_A Protein-glutamine gamma 88.0 2.9 0.0001 39.1 9.9 89 28-126 571-670 (695)
16 2q3z_A Transglutaminase 2; tra 87.6 1.5 5.2E-05 40.9 7.7 89 29-126 574-673 (687)
17 4fxk_B Complement C4-A alpha c 87.4 1.2 4.1E-05 40.7 6.9 73 39-116 161-234 (767)
18 4acq_A Alpha-2-macroglobulin; 86.4 2.5 8.6E-05 42.0 8.9 78 39-120 776-853 (1451)
19 3prx_B Cobra venom factor; imm 84.8 3.7 0.00013 41.5 9.3 73 39-116 821-896 (1642)
20 2hr0_B Complement C3 alpha' ch 83.8 5.1 0.00017 37.6 9.4 85 30-118 74-166 (915)
21 3c75_A Amicyanin; copper prote 83.6 2.3 7.8E-05 30.8 5.6 46 55-114 72-117 (132)
22 1iuz_A Plastocyanin; electron 82.9 2.7 9.3E-05 28.2 5.4 52 55-114 30-81 (98)
23 2b39_A C3; thioester, immune d 82.0 10 0.00034 38.0 11.1 77 39-119 835-914 (1661)
24 3cfu_A Uncharacterized lipopro 78.6 12 0.00041 28.2 8.3 61 43-105 43-111 (159)
25 4hci_A Cupredoxin 1; structura 78.3 3.7 0.00013 27.7 4.9 47 50-114 37-83 (100)
26 2iaa_C Azurin; quinoprotein, t 78.1 2.8 9.4E-05 30.7 4.4 64 50-114 27-109 (128)
27 3es6_B Prolactin-inducible pro 77.4 15 0.00051 26.6 8.2 69 42-119 18-87 (118)
28 2cal_A Rusticyanin; iron respi 75.8 8.8 0.0003 28.5 6.7 62 50-114 70-135 (154)
29 2pn5_A TEP1R, thioester-contai 74.9 15 0.00052 35.6 9.7 74 39-116 673-751 (1325)
30 1id2_A Amicyanin; beta barrel, 74.2 6.8 0.00023 26.9 5.4 46 55-114 46-91 (106)
31 2x41_A Beta-glucosidase; hydro 73.0 7.1 0.00024 36.0 6.7 83 47-136 615-703 (721)
32 3qbt_B Inositol polyphosphate 71.9 14 0.00047 27.1 6.9 72 27-105 23-99 (140)
33 2aan_A Auracyanin A; cupredoxi 69.5 11 0.00039 26.8 5.9 63 49-114 43-121 (139)
34 2ccw_A Azurin II, AZN-2; elect 68.1 4.3 0.00015 29.6 3.3 54 50-104 28-99 (129)
35 1nwp_A Azurin; electron transp 66.4 5.4 0.00018 29.1 3.6 64 50-114 28-110 (128)
36 3ugu_A S-arrestin; arrestin fo 66.3 27 0.00091 30.4 8.5 72 36-109 218-295 (380)
37 3ay2_A Lipid modified azurin p 64.8 5.3 0.00018 30.7 3.4 63 51-114 69-148 (167)
38 2plt_A Plastocyanin; electron 64.7 10 0.00034 25.0 4.4 60 42-114 22-81 (98)
39 3ef4_A Pseudoazurin, blue copp 60.9 12 0.0004 27.2 4.5 45 54-114 33-77 (124)
40 1iby_A Nitrosocyanin; RED copp 60.4 31 0.0011 23.3 6.5 23 91-115 72-94 (112)
41 3erx_A Pseudoazurin; copper pr 59.8 18 0.00061 26.0 5.3 36 63-114 39-76 (123)
42 3zyz_A Beta-D-glucoside glucoh 58.5 37 0.0013 31.3 8.4 85 47-136 613-702 (713)
43 1b3i_A PETE protein, protein ( 57.7 10 0.00034 25.0 3.4 51 54-114 30-80 (97)
44 3tu6_A Pseudoazurin (blue copp 57.0 15 0.0005 26.7 4.4 42 55-114 35-78 (127)
45 1pcs_A Plastocyanin; electron 55.1 16 0.00056 24.0 4.2 51 55-114 31-81 (98)
46 3a0j_A Cold shock protein; OB- 53.8 20 0.0007 23.4 4.4 45 25-71 20-70 (73)
47 2ov0_A Amicyanin; beta-sandwic 53.7 31 0.0011 23.3 5.5 46 55-114 45-90 (105)
48 2ux6_A Pseudoazurin; type-1 co 51.4 33 0.0011 24.3 5.5 43 54-114 32-76 (122)
49 3cu7_A Complement C5; Mg domai 49.9 16 0.00056 36.5 4.8 84 30-117 816-913 (1676)
50 1plc_A Plastocyanin; electron 49.5 11 0.00037 25.0 2.5 54 54-114 28-82 (99)
51 1xf1_A C5A peptidase, SCP; hyd 48.1 40 0.0014 31.8 7.0 61 47-107 499-565 (926)
52 1byp_A Protein (plastocyanin); 47.0 16 0.00056 24.0 3.1 62 42-114 21-82 (99)
53 1cuo_A Protein (azurin ISO-2); 47.0 27 0.00092 25.2 4.5 64 50-114 28-110 (129)
54 3q48_A Chaperone CUPB2; IG fol 46.8 1.1E+02 0.0036 24.6 8.5 17 47-63 42-58 (257)
55 3rfr_A PMOB; membrane, oxidore 46.3 1.2E+02 0.0041 26.7 9.1 72 32-116 45-136 (419)
56 3fsa_A Azurin; copper, cupredo 45.1 18 0.00063 26.5 3.4 64 50-114 28-110 (125)
57 1pmy_A Pseudoazurin; electron 45.0 32 0.0011 24.4 4.6 44 53-114 31-76 (123)
58 2gim_A Plastocyanin; beta shee 44.7 20 0.0007 23.8 3.3 61 42-114 24-88 (106)
59 1bw3_A Barwin, basic barley SE 42.6 31 0.0011 25.5 4.3 49 40-93 59-122 (125)
60 1suj_A CONE arrestin; sensory 42.5 1.4E+02 0.0048 25.7 9.0 77 31-109 194-276 (392)
61 1paz_A Pseudoazurin precursor; 42.2 43 0.0015 23.7 5.0 43 54-114 32-76 (123)
62 4a02_A EFCBM33A, CBM33, chitin 40.6 1.2E+02 0.0041 23.1 7.7 64 48-114 75-144 (166)
63 1w8o_A Bacterial sialidase; 3D 40.2 1.2E+02 0.004 26.1 8.3 67 41-115 368-437 (601)
64 3rgh_A Filamin-A; cell adhesio 40.2 83 0.0028 21.2 6.0 66 41-123 20-85 (100)
65 1g4m_A Beta-arrestin1; sensory 36.4 1.3E+02 0.0043 25.7 7.8 74 31-109 197-279 (393)
66 3abz_A Beta-glucosidase I; gly 35.6 78 0.0027 29.9 6.8 84 47-136 735-826 (845)
67 1c9o_A CSPB, cold-shock protei 34.2 45 0.0015 21.2 3.6 41 26-68 21-65 (66)
68 1g6p_A Cold shock protein TMCS 34.0 19 0.00065 23.1 1.7 43 26-70 20-66 (66)
69 3qis_A Inositol polyphosphate 33.5 2.1E+02 0.0071 23.8 8.6 76 26-108 25-105 (366)
70 2ytx_A Cold shock domain-conta 33.3 60 0.002 22.4 4.4 54 28-85 39-95 (97)
71 3cam_A Cold-shock domain famil 32.9 68 0.0023 20.5 4.3 40 27-68 23-66 (67)
72 2d7p_A Filamin-C; beta-sandwic 32.7 1.2E+02 0.0042 20.9 6.1 82 23-124 6-88 (112)
73 1z9l_A Vesicle-associated memb 32.6 1E+02 0.0035 21.7 5.6 52 47-107 27-79 (128)
74 1wfq_A UNR protein; beta-barre 31.7 46 0.0016 22.7 3.5 43 28-71 39-85 (89)
75 2k5n_A Putative cold-shock pro 31.6 73 0.0025 20.9 4.4 45 26-72 22-68 (74)
76 2q2e_B Type 2 DNA topoisomeras 31.5 41 0.0014 30.7 4.0 56 47-104 524-588 (621)
77 2kcm_A Cold shock domain famil 31.0 18 0.00063 24.0 1.3 46 25-72 19-69 (74)
78 2qsv_A Uncharacterized protein 30.8 1.8E+02 0.006 22.2 8.8 68 37-114 10-80 (220)
79 3vta_A Cucumisin; subtilisin-l 29.9 2.7E+02 0.0093 24.7 9.2 69 47-123 537-606 (621)
80 2d7m_A Filamin-C; beta-sandwic 29.7 1.3E+02 0.0046 20.5 5.9 63 44-123 28-90 (115)
81 3pdd_A Glycoside hydrolase, fa 29.3 1.8E+02 0.0062 21.8 7.1 62 44-114 15-78 (190)
82 1wic_A Hypothetical protein ri 28.9 1.4E+02 0.005 21.8 6.1 54 45-107 33-87 (152)
83 3i2z_B RNA chaperone, negative 28.1 95 0.0033 20.0 4.4 40 27-68 27-70 (71)
84 3cu7_A Complement C5; Mg domai 27.9 94 0.0032 31.1 6.2 77 47-123 1398-1498(1676)
85 1bxv_A Plastocyanin; copper pr 27.7 1.2E+02 0.004 19.1 5.8 20 91-114 55-74 (91)
86 3uam_A Chitin binding domain; 27.6 1.4E+02 0.0049 23.7 6.2 70 43-114 109-194 (216)
87 2dia_A Filamin-B; beta-sandwic 27.2 1.5E+02 0.0051 20.2 6.2 67 40-123 22-88 (113)
88 1rlw_A Phospholipase A2, CALB 26.7 1.4E+02 0.0048 19.7 5.3 61 51-115 60-120 (126)
89 2yty_A Cold shock domain-conta 26.3 34 0.0012 23.3 2.0 46 27-73 38-86 (88)
90 2b39_A C3; thioester, immune d 26.1 4.2E+02 0.014 26.5 10.4 82 44-127 1379-1486(1661)
91 2ccl_A Cellulosomal scaffoldin 26.0 1.5E+02 0.0051 22.3 5.8 89 38-134 11-119 (158)
92 3o81_A Beta-2-microglobulin; I 25.9 72 0.0025 22.3 3.8 47 7-58 3-50 (119)
93 2vn6_A Cohesin, scaffolding pr 25.5 1.5E+02 0.0051 22.1 5.7 44 37-84 16-62 (151)
94 2hr0_B Complement C3 alpha' ch 25.5 2.3E+02 0.0078 26.4 8.1 71 43-115 631-726 (915)
95 3ije_A Integrin alpha-V; integ 25.5 92 0.0031 29.7 5.4 45 30-76 605-650 (967)
96 2cri_A Vesicle-associated memb 25.0 1.3E+02 0.0045 21.8 5.2 53 47-108 31-84 (147)
97 3fcs_A Integrin, alpha 2B; bet 24.6 47 0.0016 31.8 3.2 31 44-76 776-806 (959)
98 4dh2_A Cellulosome anchoring p 23.8 1.7E+02 0.0057 22.6 5.7 48 31-82 15-64 (170)
99 2dmh_A Myoferlin; beta-sandwic 23.3 1.8E+02 0.006 19.6 6.1 50 51-103 57-109 (140)
100 3gld_A Pilin; all-beta, cell a 23.0 2.6E+02 0.0088 23.2 7.2 65 30-98 161-241 (295)
101 3fcs_A Integrin, alpha 2B; bet 22.9 86 0.0029 30.0 4.7 47 29-77 610-657 (959)
102 3jts_B Beta-2-microglobulin; a 22.7 1E+02 0.0034 21.5 4.0 47 7-58 3-50 (119)
103 1wfj_A Putative elicitor-respo 22.6 1.8E+02 0.0062 19.5 7.0 68 50-125 61-132 (136)
104 4b7l_A Filamin-B; structural p 22.0 2.2E+02 0.0074 23.7 6.6 68 40-123 267-335 (347)
105 3e0e_A Replication protein A; 21.8 1.9E+02 0.0064 19.4 5.5 50 40-100 6-72 (97)
106 3i6s_A Subtilisin-like proteas 20.5 4.2E+02 0.014 23.9 8.6 68 49-124 560-630 (649)
107 2ytv_A Cold shock domain-conta 20.4 57 0.0019 21.7 2.2 43 28-71 30-75 (79)
108 1aoh_A Cellulosome-integrating 20.1 2.3E+02 0.0077 21.0 5.7 42 38-83 11-54 (147)
No 1
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=98.02 E-value=7.4e-05 Score=55.97 Aligned_cols=86 Identities=12% Similarity=0.121 Sum_probs=63.7
Q ss_pred cccCCCCceEEEEeeecccccccCceeEEEEEEEEecCCcceeeEEEecCCCCCCCceEecCcee-eeeeeecCCcceEE
Q 031694 22 SFASSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNIS-QSWERLDAGGILSH 100 (155)
Q Consensus 22 ~~~~~~~a~LlvsK~i~~~~~v~g~~~vtV~ytIYNvG~s~A~dV~l~D~sfp~~~F~~v~G~~s-~~~~ri~pg~nvsH 100 (155)
.++....|.|.++.. ....+..| +.++++.+|.|.|+.+|.+.++.- .+.|..- ...-.|+||++.+-
T Consensus 10 ~~~~~~~pDL~V~is-~P~~v~~G-~~~ti~vtV~N~G~~~a~~~~V~l---------yvng~~v~t~~v~La~G~s~tv 78 (127)
T 3idu_A 10 LATTFEFPDLTVEIK-GPDVVGVN-KLAEYEVHVKNLGGIGVPSTKVRV---------YINGTLYKNWTVSLGPKEEKVL 78 (127)
T ss_dssp C--CCSSCCEEEEEE-SCSEECTT-CCEEEEEEEEECSSSCEEEEEEEE---------EETTEEEEEEEEEECTTCEEEE
T ss_pred EeeeccCCCeEEEec-CCCcccCC-CEEEEEEEEEECCCCccCCcEEEE---------EECCEEEeeEEeccCCCCeEEE
Confidence 355577899999554 57788889 999999999999998766655542 2344431 11225999999999
Q ss_pred EEEEEEceeeeEEeecEE
Q 031694 101 SFELDAKVKGMFHGSPAL 118 (155)
Q Consensus 101 ~~vv~p~~~G~f~~t~A~ 118 (155)
.|...|...|.|++.+-+
T Consensus 79 ~f~~~~~~~G~~~v~AvV 96 (127)
T 3idu_A 79 TFNWTPTQEGMYRINATV 96 (127)
T ss_dssp EEEECCSSCEEEEEEEEE
T ss_pred EEEEEcCCCcEEEEEEEE
Confidence 999999999999886543
No 2
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=97.36 E-value=0.0019 Score=47.55 Aligned_cols=76 Identities=17% Similarity=0.238 Sum_probs=58.1
Q ss_pred ceEEEEeeecccccccCceeEEEEEEEEecCCcc--eeeEEEecCCCCCCCceEecCce--eeeeeeecCCcceEEEEEE
Q 031694 29 PFIVAHKKASLKRLKSGAERISVSIDIHNQGTST--AYDVSLTDDSWPQDKFDVISGNI--SQSWERLDAGGILSHSFEL 104 (155)
Q Consensus 29 a~LlvsK~i~~~~~v~g~~~vtV~ytIYNvG~s~--A~dV~l~D~sfp~~~F~~v~G~~--s~~~~ri~pg~nvsH~~vv 104 (155)
|.|.+.- +....+++| +.++|+.+|.|+|..+ +..|.|.. .|.. ......|++|++.+-.|..
T Consensus 3 PDL~vt~-itP~~~~~~-~~~ti~atVkN~G~~~a~~~~V~ly~-----------~g~~v~t~~v~~LaaG~s~tv~~~w 69 (114)
T 2l0d_A 3 PDLVPVS-LTPVTVVPN-TVNTMTATIENQGNKDSTSFNVSLLV-----------DGIVVDTQTVTSLESENSTNVDFHW 69 (114)
T ss_dssp CCEEEEE-EECSEECTT-SEEEEEEEEEECSSSCBCCEEEEEEE-----------TTEEEEEEEESCBCBTCEEEEEEEE
T ss_pred CCcEEEe-ccCCCcCCC-CeEEEEEEEEECCCCCCCCEEEEEEE-----------CCEEEcceecccccCCCEEEEEEEE
Confidence 6676665 356668899 9999999999999874 45565553 4544 3456679999999999999
Q ss_pred EEc-eeeeEEeecE
Q 031694 105 DAK-VKGMFHGSPA 117 (155)
Q Consensus 105 ~p~-~~G~f~~t~A 117 (155)
.|+ ..|.|.++..
T Consensus 70 ~~~~~~G~ytl~a~ 83 (114)
T 2l0d_A 70 TLDGTANSYTLTVN 83 (114)
T ss_dssp ECCCSCSEEEEEEE
T ss_pred eecCcCceEEEEEE
Confidence 998 5899998764
No 3
>3hrz_B Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_G* 3hs0_B*
Probab=95.33 E-value=0.12 Score=41.82 Aligned_cols=74 Identities=12% Similarity=-0.003 Sum_probs=53.7
Q ss_pred ccccccCceeEEEEEEEEecCCcceeeEEEecCCCCCCCceEecCc--eeeeeeeecCCcceEEEEEEEEceeeeEEeec
Q 031694 39 LKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGN--ISQSWERLDAGGILSHSFELDAKVKGMFHGSP 116 (155)
Q Consensus 39 ~~~~v~g~~~vtV~ytIYNvG~s~A~dV~l~D~sfp~~~F~~v~G~--~s~~~~ri~pg~nvsH~~vv~p~~~G~f~~t~ 116 (155)
...++.| +.+.+..+|||..+.. ..|++.=. ..+.|...... ...+.-.|++|+..+..+.++|++.|..+++-
T Consensus 89 P~sv~rG-E~~~l~~~V~Ny~~~~-~~v~V~l~--~~~~~~~~~~~~~~~~~~v~v~a~~~~~v~f~i~p~~~G~~~i~v 164 (252)
T 3hrz_B 89 PYSVVKN-EQVEIRAILHNYVNED-IYVRVELL--YNPAFCSASTKGQRYRQQFPIKALSSRAVPFVIVPLEQGLHDVEI 164 (252)
T ss_dssp CSCEETT-CCEEEEEEEEECSSSC-EEEEEEEC--CCTTEEESCCSSCCEEEEEEECTTEEEEEEEEEEECSSEEEEEEE
T ss_pred CcEEeeC-CEEEEEEEEEcccCce-EEEEEEEE--cCCceEeecCCCCceEEEEEECCCCeEEEEEEEEeccCCcEEEEE
Confidence 4455677 9999999999998854 45555421 23457665422 23344589999999999999999999887754
No 4
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=95.18 E-value=0.04 Score=39.50 Aligned_cols=77 Identities=12% Similarity=0.037 Sum_probs=60.6
Q ss_pred ccccccCceeEEEEEEEEecCCcceeeEEEecCCCCCCCceEecCceeeeeeeecCCcceEEEEEEEEceeeeEEeecEE
Q 031694 39 LKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPAL 118 (155)
Q Consensus 39 ~~~~v~g~~~vtV~ytIYNvG~s~A~dV~l~D~sfp~~~F~~v~G~~s~~~~ri~pg~nvsH~~vv~p~~~G~f~~t~A~ 118 (155)
....++| +++++++++.|-=..+-.|..++=++ =.+..+ .......|+||+.+++.+.++|++.|.-.+ .
T Consensus 13 ~g~~~v~-~~l~v~vsf~NPL~~~L~~c~~~vEG-----~GL~~~-~~~~~~~v~pg~~~~~~~~~~P~~~G~~~L---~ 82 (102)
T 2xzz_A 13 LGAAVVG-QECEVQIVFKNPLPVTLTNVVFRLEG-----SGLQRP-KILNVGDIGGNETVTLRQSFVPVRPGPRQL---I 82 (102)
T ss_dssp SSCCCSS-SCEEEEEEEECCSSSCBCSEEEEEEE-----TTTEEE-EEEEECCBCTTCEEEEEEEECCCSCSSCCC---E
T ss_pred CCCcccC-CeEEEEEEEECCCCCcccCEEEEEEC-----CCCCcc-eEEEcCcCCCCCEEEEEEEEecCcccceEE---E
Confidence 5778899 99999999999988888888877321 014555 677788999999999999999999998665 4
Q ss_pred EEEEcCC
Q 031694 119 ITFRIPT 125 (155)
Q Consensus 119 VtY~~se 125 (155)
+++...+
T Consensus 83 a~f~s~~ 89 (102)
T 2xzz_A 83 ASLDSPQ 89 (102)
T ss_dssp EEEECGG
T ss_pred EEEECCc
Confidence 5554433
No 5
>2kut_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Geobacter metallireducens}
Probab=95.18 E-value=0.031 Score=41.59 Aligned_cols=73 Identities=21% Similarity=0.227 Sum_probs=51.2
Q ss_pred cccccccCceeEEEEEEEEecCCc--ceeeEEEecCCCCCCCceEecCce--eeeeeeecCCcceEEEEEEE--Ecee--
Q 031694 38 SLKRLKSGAERISVSIDIHNQGTS--TAYDVSLTDDSWPQDKFDVISGNI--SQSWERLDAGGILSHSFELD--AKVK-- 109 (155)
Q Consensus 38 ~~~~~v~g~~~vtV~ytIYNvG~s--~A~dV~l~D~sfp~~~F~~v~G~~--s~~~~ri~pg~nvsH~~vv~--p~~~-- 109 (155)
....+.+| +.++|+.+|-|+|.. +|..|.|.-++ |.. +|.+ +.....|+||++.+-.+.+. ++..
T Consensus 8 sP~~p~~g-~~vTvsatVkN~Gt~~s~a~~V~~yl~~-p~~-----gg~~vgt~tv~~LaaG~s~t~~v~~~~~~~~~~~ 80 (122)
T 2kut_A 8 SKETPFEG-EEITVSARVTNRGAAEAHNVPVAVYLGN-PAQ-----GGVEIGRDTISRIPVGGTGLARVQWKATRKLAGR 80 (122)
T ss_dssp CTTSCCTT-CEEEEEEEEECCSSSCBCCCCEEECSSC-TTT-----CCCCCBCCCCSCBCTTCEEECCEEEECCCCCSSC
T ss_pred CCCCCCCC-CeEEEEEEEEeCCCcccCcEEEEEEeCC-Ccc-----CCeEEeeEEccccCCCCeEEEEEEEecCCccccc
Confidence 34567888 999999999999988 67778887655 321 2232 33457899999999555544 4443
Q ss_pred ---eeEEeecE
Q 031694 110 ---GMFHGSPA 117 (155)
Q Consensus 110 ---G~f~~t~A 117 (155)
|.|.+.+.
T Consensus 81 a~~Gsy~v~Av 91 (122)
T 2kut_A 81 AANPGVPVYAV 91 (122)
T ss_dssp CSCCCCCCCEE
T ss_pred ccCceEEEEEE
Confidence 88888653
No 6
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=95.09 E-value=0.025 Score=48.38 Aligned_cols=59 Identities=19% Similarity=0.212 Sum_probs=43.4
Q ss_pred eeEEEEEEEEecCCcceeeEEE-ecCCCCCCCceEecCce---------------eeeeeeecCCcceEEEEEEE
Q 031694 47 ERISVSIDIHNQGTSTAYDVSL-TDDSWPQDKFDVISGNI---------------SQSWERLDAGGILSHSFELD 105 (155)
Q Consensus 47 ~~vtV~ytIYNvG~s~A~dV~l-~D~sfp~~~F~~v~G~~---------------s~~~~ri~pg~nvsH~~vv~ 105 (155)
.++.|+.+|.|.|+.+..=++. .=|++|.+.|+|-.+-. ...+-.|+||+++++.+-+-
T Consensus 36 ~~~~vk~tvtN~g~~~~~lLk~~~lD~~~~~~~~V~~~G~~v~f~Gi~~~~~~~~~d~f~~L~pG~Sve~~~dla 110 (343)
T 2x3c_A 36 DDVRVNLTLTNTGDKPIRLLKWQLPGSDDAPLFLVERDGQPVSYEGALIKRAAPTDKDFQLLKAGQSLTVQAEVS 110 (343)
T ss_dssp SCCEEEEEEEECSSSCEEEEGGGSCSSSCCCCEEEEETTEECCBCSCCCCCCCCCGGGEEEECTTCEEEEEEECT
T ss_pred CCeEEEEEEEeCCCCceEeeccCCCCcCccceEEEEeCCcccceeeEEEeccCCChhhcEEeCCCCeEEEEEehh
Confidence 5899999999999987422111 11468888999865421 23588999999999999984
No 7
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=92.40 E-value=0.91 Score=39.67 Aligned_cols=75 Identities=20% Similarity=0.274 Sum_probs=53.6
Q ss_pred ceEEEEeeecccccccCceeEEEEEEEEecCCccee-------eEEEec-------CCCCCCCceEecCceeeeeee-ec
Q 031694 29 PFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAY-------DVSLTD-------DSWPQDKFDVISGNISQSWER-LD 93 (155)
Q Consensus 29 a~LlvsK~i~~~~~v~g~~~vtV~ytIYNvG~s~A~-------dV~l~D-------~sfp~~~F~~v~G~~s~~~~r-i~ 93 (155)
+..+.-|-..-+|-|.| +.++++++|.|.|+++.+ +|.+.+ ..+|.+ . +-.+-++++=+. |+
T Consensus 247 ~~~V~~~v~~A~Y~vpg-R~l~~~~~VtN~g~~pvrlgeF~tA~vrFln~~~~~~~~~~P~~-l-la~~gL~vsd~~pI~ 323 (382)
T 1yew_A 247 APTVSVKVEDATYRVPG-RAMRMKLTITNHGNSPIRLGEFYTASVRFLDSDVYKDTTGYPED-L-LAEDGLSVSDNSPLA 323 (382)
T ss_dssp CCSEEEEEEEEEEESSC-SEEEEEEEEEECSSSCEEEEEEECSSCEEECTTTCCCCSCCCGG-G-EETTCEEESCCSCBC
T ss_pred CCceEEEeeccEEecCC-cEEEEEEEEEcCCCCceEeeeEEeccEEEeCCcccccCCCChHH-h-hccCCceeCCCCCcC
Confidence 34566676778899999 999999999999999865 566644 233333 1 333345655555 99
Q ss_pred CCcceEEEEEEEE
Q 031694 94 AGGILSHSFELDA 106 (155)
Q Consensus 94 pg~nvsH~~vv~p 106 (155)
||++.+-++.+.-
T Consensus 324 PGETr~~~v~a~d 336 (382)
T 1yew_A 324 PGETRTVDVTASD 336 (382)
T ss_dssp TTCEEEEEEEEEC
T ss_pred CCceeEEEEEeeh
Confidence 9999999888763
No 8
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=91.89 E-value=0.69 Score=34.16 Aligned_cols=77 Identities=14% Similarity=0.281 Sum_probs=49.8
Q ss_pred cCceeEEEEEEEEecCCcce---------eeEEEec-CCCCCCCceEecCce---eeeeeeecCCcceEEEEEEE-Ecee
Q 031694 44 SGAERISVSIDIHNQGTSTA---------YDVSLTD-DSWPQDKFDVISGNI---SQSWERLDAGGILSHSFELD-AKVK 109 (155)
Q Consensus 44 ~g~~~vtV~ytIYNvG~s~A---------~dV~l~D-~sfp~~~F~~v~G~~---s~~~~ri~pg~nvsH~~vv~-p~~~ 109 (155)
.| ..+.++++|-|.|+.+- +|+.|.| ++ ...|..-.|.+ -..-..|+||+..+...+.- +...
T Consensus 16 ~g-~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G--~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~p 92 (120)
T 3isy_A 16 EP-EQIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEH--KERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEP 92 (120)
T ss_dssp CS-SCEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTC--CEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCS
T ss_pred CC-CeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCC--CEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCC
Confidence 56 79999999999998543 2444444 11 22222222221 22347899999999999999 5688
Q ss_pred eeEEeecEEEEEEcCCc
Q 031694 110 GMFHGSPALITFRIPTK 126 (155)
Q Consensus 110 G~f~~t~A~VtY~~se~ 126 (155)
|.|.. ++.++..-+
T Consensus 93 G~Ytl---~a~l~~~~~ 106 (120)
T 3isy_A 93 GTYEV---KVTFKGRAE 106 (120)
T ss_dssp EEEEE---EEEECCEET
T ss_pred ccEEE---EEEEEeeec
Confidence 99987 455554333
No 9
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.45 E-value=0.32 Score=33.54 Aligned_cols=82 Identities=15% Similarity=0.163 Sum_probs=55.5
Q ss_pred CCceEEEEeee-cccccccCceeEEEEEEEEecCCcceeeEEEecCCCC-CCCceEecCceeeeeeeecCCcceEEEEEE
Q 031694 27 DVPFIVAHKKA-SLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWP-QDKFDVISGNISQSWERLDAGGILSHSFEL 104 (155)
Q Consensus 27 ~~a~LlvsK~i-~~~~~v~g~~~vtV~ytIYNvG~s~A~dV~l~D~sfp-~~~F~~v~G~~s~~~~ri~pg~nvsH~~vv 104 (155)
-+|.+-+++.. .--.+..| ...+-+++|.|.|+.++ ..++..+.=+ ...|.+ +-.-..|+||+...-.+..
T Consensus 6 ~~P~i~~~~~~ldFG~v~~g-~~~~~~~~l~N~g~~p~-~~~~~~~~~~~~~~f~v-----~p~~g~i~pg~~~~i~V~f 78 (112)
T 2e6j_A 6 SGPKIHFNFELLDIGKVFTG-SAHCYEAILYNKGSIDA-LFNMTPPTSALGACFVF-----SPKEGIIEPSGVQAIQISF 78 (112)
T ss_dssp CCCSEEESCSEEEEEEEESS-CCEEEEEEEEECCSSCE-EEEECCCSSHHHHHCEE-----ESSEEEECTTBCCEEEEEE
T ss_pred CCCEEEECcccEecEeEEEC-CEEEEEEEEEECCcceE-EEEEecCCccccCcEEE-----ECCcCEECCCCEEEEEEEE
Confidence 34666665543 33345556 78999999999999876 4554332100 012432 2345689999999999999
Q ss_pred EEceeeeEEee
Q 031694 105 DAKVKGMFHGS 115 (155)
Q Consensus 105 ~p~~~G~f~~t 115 (155)
.|+..|.|+-+
T Consensus 79 ~~~~~g~f~~~ 89 (112)
T 2e6j_A 79 SSIILGNFEEE 89 (112)
T ss_dssp CCCCCEEEEEE
T ss_pred ECCCcceEEEE
Confidence 99999999864
No 10
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.21 E-value=0.69 Score=32.85 Aligned_cols=84 Identities=12% Similarity=0.180 Sum_probs=64.4
Q ss_pred CCCceEEEEeeecccccccCceeEEEEEEEEecCCcceeeEEEecCCCCCCCceEecCceeeeeeeecCCcceEEEEEEE
Q 031694 26 SDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELD 105 (155)
Q Consensus 26 ~~~a~LlvsK~i~~~~~v~g~~~vtV~ytIYNvG~s~A~dV~l~D~sfp~~~F~~v~G~~s~~~~ri~pg~nvsH~~vv~ 105 (155)
...|.|-+.+.+.-....+| ..-+-++.|-|.|+.++ ..++.. +..|.+-- .-..|+||+...-.+.-.
T Consensus 21 ~~~~~l~~p~~l~fg~~~v~-~~~~~~~~l~N~g~~~~-~f~~~~----~~~F~i~P-----~~g~L~pg~~~~i~V~F~ 89 (122)
T 2ys4_A 21 GARAILDFPDKLNFSTCPVK-YSTQKILLVRNIGNKNA-VFHIKT----CRPFSIEP-----AIGTLNVGESMQLEVEFE 89 (122)
T ss_dssp SCCCCCCCCSEECCCSEESS-SCEEEEEEEECCSSSCE-EEEEEC----CTTEEEES-----SEEEECTTCEEEEEEEEC
T ss_pred cCCcEECCCCeeecCCeecC-CeEEEEEEEEECCCCCE-EEEEec----CCCeEEEC-----CcCEECCCCEEEEEEEEE
Confidence 34455555667777888889 89999999999999877 345443 24686632 237999999999999999
Q ss_pred EceeeeEEeecEEEEE
Q 031694 106 AKVKGMFHGSPALITF 121 (155)
Q Consensus 106 p~~~G~f~~t~A~VtY 121 (155)
|+..|.|+..- .+.|
T Consensus 90 P~~~g~~~~~l-~v~~ 104 (122)
T 2ys4_A 90 PQSVGDHSGRL-IVCY 104 (122)
T ss_dssp CSSSBCCCCBC-EEEE
T ss_pred cCCCccEEEEE-EEEE
Confidence 99999998765 5556
No 11
>1ex0_A Coagulation factor XIII A chain; transglutaminase, blood coagulation, mutant, W279F, oxyanion, transferase; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1evu_A 1fie_A 1f13_A 1ggt_A 1ggu_A 1ggy_A 1qrk_A
Probab=90.17 E-value=2.9 Score=39.30 Aligned_cols=89 Identities=12% Similarity=0.103 Sum_probs=69.2
Q ss_pred CceEEEEeeecccc----------cccCceeEEEEEEEEecCCcceeeEEEecCCCCCCCceEecCceeeeeeeecCCcc
Q 031694 28 VPFIVAHKKASLKR----------LKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGI 97 (155)
Q Consensus 28 ~a~LlvsK~i~~~~----------~v~g~~~vtV~ytIYNvG~s~A~dV~l~D~sfp~~~F~~v~G~~s~~~~ri~pg~n 97 (155)
.-.+++.|.|.... +++| +++++++++.|-=..+-.|..|+=++ =.+..+ .......|+||+.
T Consensus 616 ~~~~~~~~di~l~~P~l~I~v~g~~~v~-~~l~v~vsf~NPL~~~L~~c~~~vEG-----~GL~~~-~~~~~~~v~pg~~ 688 (731)
T 1ex0_A 616 RDVLAKQKSTVLTIPEIIIKVRGTQVVG-SDMTVTVQFTNPLKETLRNVWVHLDG-----PGVTRP-MKKMFREIRPNST 688 (731)
T ss_dssp CCEEEEEEEEECBCCCCEEEEEECCBTT-SCEEEEEEEECCSSSCEEEEEEEEEE-----TTTEEE-EEEEEEEECTTCE
T ss_pred CeEEEEEEEEEEeCCCEEEEeCCCcccC-CeEEEEEEEECCCCCcccceEEEEEC-----CCCCce-eeEecCccCCCCE
Confidence 34577777775544 5788 99999999999988888888876311 115555 6788899999999
Q ss_pred eEEEEEEEEceeeeEEeecEEEEEEcCCc
Q 031694 98 LSHSFELDAKVKGMFHGSPALITFRIPTK 126 (155)
Q Consensus 98 vsH~~vv~p~~~G~f~~t~A~VtY~~se~ 126 (155)
+++.+.++|++.|.-.+ .+++...+=
T Consensus 689 ~~~~~~~~P~~~G~r~L---~a~f~s~~l 714 (731)
T 1ex0_A 689 VQWEEVCRPWVSGHRKL---IASMSSDSL 714 (731)
T ss_dssp EEEEEEECCSSCEEEEE---EEEEECSSC
T ss_pred EEEEEEEEeccccceEE---EEEEECCcc
Confidence 99999999999999887 566665554
No 12
>1vjj_A Protein-glutamine glutamyltransferase E; transglutaminase 3, X-RAY crystallography, metalloenzyme, calcium ION; HET: GDP; 1.90A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1sgx_A* 1l9m_A 1l9n_A* 1nud_A 1nuf_A 1nug_A 1rle_A*
Probab=89.95 E-value=1.1 Score=41.97 Aligned_cols=87 Identities=15% Similarity=0.153 Sum_probs=68.8
Q ss_pred EEEEeeecccc----------cccCceeEEEEEEEEecCCcceeeEEEecCCCCCCCceEecCceeeeeeeecCCcceEE
Q 031694 31 IVAHKKASLKR----------LKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSH 100 (155)
Q Consensus 31 LlvsK~i~~~~----------~v~g~~~vtV~ytIYNvG~s~A~dV~l~D~sfp~~~F~~v~G~~s~~~~ri~pg~nvsH 100 (155)
+++.|.|.... +++| +++++++++.|-=..+-.|..|+=++ =.+..|........|+||+.+++
T Consensus 583 ~~~~~di~l~~P~l~I~v~g~~~v~-~~l~v~v~f~NPL~~~L~~c~~~vEG-----~GL~~~~~~~~~~~v~pg~~~~~ 656 (692)
T 1vjj_A 583 VVVERDIILDNPTLTLEVLNEARVR-KPVNVQMLFSNPLDEPVRDCVLMVEG-----SGLLLGNLKIDVPTLGPKERSRV 656 (692)
T ss_dssp EEEEEEEECBCCCEEEEECSCCBTT-SCEEEEEEEECCSSSCBCSEEEEEEC-----TTTSSSCEEEEECCBCTTCEEEE
T ss_pred EEEEEEEEEcCCCEEEEeCCCcccC-CeEEEEEEEECCCCCcccceEEEEEC-----CCCCCCceEEEcCccCCCCEEEE
Confidence 77888775554 5788 99999999999988888888876321 11556677788899999999999
Q ss_pred EEEEEEceeeeEEeecEEEEEEcCCc
Q 031694 101 SFELDAKVKGMFHGSPALITFRIPTK 126 (155)
Q Consensus 101 ~~vv~p~~~G~f~~t~A~VtY~~se~ 126 (155)
.+.++|++.|.-.+ .+++...+=
T Consensus 657 ~~~~~P~~~G~r~L---~a~f~s~~l 679 (692)
T 1vjj_A 657 RFDILPSRSGTKQL---LADFSCNKF 679 (692)
T ss_dssp EEEECCCSCEEEEE---EEEEECSSS
T ss_pred EEEEEeccccceEE---EEEEECCcc
Confidence 99999999999887 566655443
No 13
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=89.27 E-value=1.5 Score=34.24 Aligned_cols=80 Identities=15% Similarity=0.240 Sum_probs=53.6
Q ss_pred CCceEEEEeeecccccccCceeEEEEEEEEecCCcceeeEEEecCCCCCCCceEecCceee--eeeeecCCcceEEEEEE
Q 031694 27 DVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQ--SWERLDAGGILSHSFEL 104 (155)
Q Consensus 27 ~~a~LlvsK~i~~~~~v~g~~~vtV~ytIYNvG~s~A~dV~l~D~sfp~~~F~~v~G~~s~--~~~ri~pg~nvsH~~vv 104 (155)
..|.+-++..+..-.+. | +..+.+++|.|.|+++- .|.+- .---|-+.. ..+.|+||++..-.+..
T Consensus 116 ~~~~i~~~~~~dfG~i~-g-~~~~~~f~i~N~G~~pL---~I~~v-------~~scgct~~~~~~~~i~PGe~~~i~v~~ 183 (220)
T 2qsv_A 116 QTGVMELSTYLDMGQLD-G-ETTKAAIEIRNVGAGPL---RLHSV-------TTRNPALTAVPDRTEIKPGGSTLLRIAV 183 (220)
T ss_dssp GCCCEECCCEEEEEECT-T-SCEEEEEEEEECSSSCE---EEEEE-------EECSTTEEEEESCSEECTTCEEEEEEEE
T ss_pred cCCEEEEEeEEeeeccC-C-CeEEEEEEEEECCCCCE---EEEEE-------EeCCCCEeeecCCccCCCCCEEEEEEEE
Confidence 45667776333333333 6 89999999999999853 34331 012344444 34579999999999999
Q ss_pred EEcee-ee----EEeecEE
Q 031694 105 DAKVK-GM----FHGSPAL 118 (155)
Q Consensus 105 ~p~~~-G~----f~~t~A~ 118 (155)
.|+.. |. |+-+-.+
T Consensus 184 ~~~~~~g~~~~~~~~~i~v 202 (220)
T 2qsv_A 184 DPQVMKAEGWQSIAADISI 202 (220)
T ss_dssp CHHHHHHTTCSEEEEEEEE
T ss_pred ecCCCCCcccceeccEEEE
Confidence 99888 88 7764433
No 14
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=88.57 E-value=1.5 Score=38.77 Aligned_cols=73 Identities=10% Similarity=0.114 Sum_probs=53.1
Q ss_pred EEEEeeecccccccCceeEEEEEEEEecCCccee-------eEEEecCCC------CCCCceEecCceeeeeeeecCCcc
Q 031694 31 IVAHKKASLKRLKSGAERISVSIDIHNQGTSTAY-------DVSLTDDSW------PQDKFDVISGNISQSWERLDAGGI 97 (155)
Q Consensus 31 LlvsK~i~~~~~v~g~~~vtV~ytIYNvG~s~A~-------dV~l~D~sf------p~~~F~~v~G~~s~~~~ri~pg~n 97 (155)
-+.-|-..-+|-+.| +.++++++|.|.|+++.+ +|.+.|.+. .+++...-.| ++ +=+-|+||++
T Consensus 283 ~V~~~v~~A~Y~vpg-R~l~~~~~VtN~g~~pvrlgeF~tA~vrFlnp~v~~~~~~~p~~l~a~~G-L~-s~~pI~PGET 359 (419)
T 3rfr_A 283 QVTTELNGGVYKVPG-RELTINVKVKNGTSQPVRLGEYTAAGLRFLNPTVFTQKPDFPDYLLADRG-LS-NDDVIAPGES 359 (419)
T ss_dssp CCEEEEEEEEEESSS-SEEEEEEEEECCSSSCBEEEEEECSSCEEECTTTCSSCCCCCTTTEESCC-CC-CCCCBCTTCE
T ss_pred ceEEEEeceEEecCC-cEEEEEEEEecCCCCceEEeeEEEccEEEeCcccccCCCCCchhhhhccC-CC-CCCCcCCCcc
Confidence 345565667888999 999999999999998764 677776433 3344544456 43 3338999999
Q ss_pred eEEEEEEEE
Q 031694 98 LSHSFELDA 106 (155)
Q Consensus 98 vsH~~vv~p 106 (155)
.+-++.+.-
T Consensus 360 rt~~V~a~d 368 (419)
T 3rfr_A 360 KEIVVKIQD 368 (419)
T ss_dssp EEEEEEEEC
T ss_pred eEEEEEeeh
Confidence 999988874
No 15
>1g0d_A Protein-glutamine gamma-glutamyltransferase; tissue transglutaminase,acyltransferase; 2.50A {Pagrus major} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4
Probab=88.04 E-value=2.9 Score=39.08 Aligned_cols=89 Identities=12% Similarity=0.073 Sum_probs=65.7
Q ss_pred CceEEEEeeeccc----------ccccCceeEEEEEEEEecCCcceeeEEEecCCCCCCCceEecCceeeee-eeecCCc
Q 031694 28 VPFIVAHKKASLK----------RLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSW-ERLDAGG 96 (155)
Q Consensus 28 ~a~LlvsK~i~~~----------~~v~g~~~vtV~ytIYNvG~s~A~dV~l~D~sfp~~~F~~v~G~~s~~~-~ri~pg~ 96 (155)
.-.+++.|.|... .+++| +++++++++.|-=..+-.|..|+=++ =.+..+ ..... ..|+||+
T Consensus 571 ~~~~~~~~di~l~~P~l~I~v~g~~~v~-~~l~a~vsf~NPL~~~L~~c~~~vEG-----~GL~~~-~~~~~~~~v~Pg~ 643 (695)
T 1g0d_A 571 NGPIMTVANIPLSTPELLVQVPGKAVVW-EPLTAYVSFTNPLPVPLKGGVFTLEG-----AGLLSA-TQIHVNGAVAPSG 643 (695)
T ss_dssp --EEEEEEEEECBCCCCEEECCSCEETT-CCEEEEEEEECCSSSCEESCEEEEEE-----TTTEEE-EEEECSSEECTTC
T ss_pred CeEEEEEEEEEEcCCCEEEEeCCCcccC-CeEEEEEEEECCCCCcccceEEEEEC-----CCCCcc-eEEecCCCcCCCC
Confidence 3347777777444 45788 99999999999888887777766211 114455 56677 7899999
Q ss_pred ceEEEEEEEEceeeeEEeecEEEEEEcCCc
Q 031694 97 ILSHSFELDAKVKGMFHGSPALITFRIPTK 126 (155)
Q Consensus 97 nvsH~~vv~p~~~G~f~~t~A~VtY~~se~ 126 (155)
.+++.+.++|++.|.-.+ .+++...+=
T Consensus 644 ~~~~~~~~~P~~~G~r~L---~a~f~s~~l 670 (695)
T 1g0d_A 644 KVSVKLSFSPMRTGVRKL---LVDFDSDRL 670 (695)
T ss_dssp EEEEEEEECCSSCEEEEE---EEEEECSSC
T ss_pred EEEEEEEEEcCCccceEE---EEEEECCcc
Confidence 999999999999999887 566665553
No 16
>2q3z_A Transglutaminase 2; transglutaminase 2, tissue transglutaminase, TG2, transferas; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1kv3_A 3ly6_A*
Probab=87.55 E-value=1.5 Score=40.88 Aligned_cols=89 Identities=11% Similarity=0.202 Sum_probs=68.2
Q ss_pred ceEEEEeeecccc----------cccCceeEEEEEEEEecCCcceeeEEEecCCCCCCCceEecCceeeee-eeecCCcc
Q 031694 29 PFIVAHKKASLKR----------LKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSW-ERLDAGGI 97 (155)
Q Consensus 29 a~LlvsK~i~~~~----------~v~g~~~vtV~ytIYNvG~s~A~dV~l~D~sfp~~~F~~v~G~~s~~~-~ri~pg~n 97 (155)
-.+++.|.|.... +++| +++++++++.|-=..+-.|..|+=++ =.+..+....+. ..|+||+.
T Consensus 574 ~~~~~~~di~l~~P~l~I~v~g~~~v~-~~~~v~v~f~NPL~~~L~~c~~~vEG-----~GL~~~~~~~~~~~~v~pg~~ 647 (687)
T 2q3z_A 574 SYLLAERDLYLENPEIKIRILGEPKQK-RKLVAEVSLQNPLPVALEGCTFTVEG-----AGLTEEQKTVEIPDPVEAGEE 647 (687)
T ss_dssp EEEEEEEEEECBCCCCEEEEESCCSSS-SCEEEEEEEECCSSSCBCSEEEEEEC-----TTTCSSCEEEEECSCBCTTCE
T ss_pred eEEEEEEEEEEeCCCEEEEeCCCcccC-CeEEEEEEEECCCCCcccceEEEEEC-----CCCCCCceEEecCCCcCCCCE
Confidence 3477777765554 5678 99999999999988888888876321 115566667778 78999999
Q ss_pred eEEEEEEEEceeeeEEeecEEEEEEcCCc
Q 031694 98 LSHSFELDAKVKGMFHGSPALITFRIPTK 126 (155)
Q Consensus 98 vsH~~vv~p~~~G~f~~t~A~VtY~~se~ 126 (155)
+++.+.++|++.|.-.+ .+++...+=
T Consensus 648 ~~~~~~~~P~~~G~~~L---~a~f~s~~l 673 (687)
T 2q3z_A 648 VKVRMDLVPLHMGLHKL---VVNFESDKL 673 (687)
T ss_dssp EEEEEEECCCSSSCEEE---EEEEECSSS
T ss_pred EEEEEEEEeccccceEE---EEEEEcCcc
Confidence 99999999999999887 566655443
No 17
>4fxk_B Complement C4-A alpha chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_B*
Probab=87.41 E-value=1.2 Score=40.72 Aligned_cols=73 Identities=14% Similarity=0.103 Sum_probs=53.2
Q ss_pred ccccccCceeEEEEEEEEecCCcceeeEEEecCCCCCCCceEecCc-eeeeeeeecCCcceEEEEEEEEceeeeEEeec
Q 031694 39 LKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGN-ISQSWERLDAGGILSHSFELDAKVKGMFHGSP 116 (155)
Q Consensus 39 ~~~~v~g~~~vtV~ytIYNvG~s~A~dV~l~D~sfp~~~F~~v~G~-~s~~~~ri~pg~nvsH~~vv~p~~~G~f~~t~ 116 (155)
...++.| +.+.+..+|+|..+. ...|++.= -+.+.|.+..+. ...++ .|++|+..+..|.|+|++.|..+++-
T Consensus 161 P~~v~~G-D~~~i~~~V~N~~~~-~~~v~v~l--~~~~~~~~~~~~~~~~~~-~v~a~~~~~v~f~i~~~~~G~~~i~v 234 (767)
T 4fxk_B 161 PMSVRRF-EQLELRPVLYNYLDK-NLTVSVHV--SPVEGLCLAGGGGLAQQV-LVPAGSARPVAFSVVPTAAAAVSLKV 234 (767)
T ss_dssp CSCEETT-CEEEECCEEEECSSS-CEEEEEEE--CCCTTEECSSSSCCCEEE-EECSSCEEECCEEEEECSCSEEEEEE
T ss_pred CCeeccC-CEEEEEEEEEECCCC-CEEEEEEE--EecCCeEEecCCceeEEE-EEcCCCeEEEEEEEEECccCcEEEEE
Confidence 4567777 999999999999875 34555542 134456555443 34444 69999999999999999999988754
No 18
>4acq_A Alpha-2-macroglobulin; hydrolase inhibitor, proteinase inhibitor, irreversible PROT inhibitor, conformational change, blood plasma inhibitor; HET: MEQ NAG MAN; 4.30A {Homo sapiens}
Probab=86.41 E-value=2.5 Score=42.03 Aligned_cols=78 Identities=15% Similarity=0.096 Sum_probs=56.5
Q ss_pred ccccccCceeEEEEEEEEecCCcceeeEEEecCCCCCCCceEecCceeeeeeeecCCcceEEEEEEEEceeeeEEeecEE
Q 031694 39 LKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPAL 118 (155)
Q Consensus 39 ~~~~v~g~~~vtV~ytIYNvG~s~A~dV~l~D~sfp~~~F~~v~G~~s~~~~ri~pg~nvsH~~vv~p~~~G~f~~t~A~ 118 (155)
...++.| +.+.+..+|+|..+. +.+|++.=. .++.|++..+.....=-.|++|+..+..+.|+|++.|..+++-.-
T Consensus 776 P~sv~rG-E~~~l~~~V~N~~~~-~~~v~V~l~--~~~~~~~~~~~~~~~~v~l~~~~~~~v~f~v~p~~~G~~~i~v~a 851 (1451)
T 4acq_A 776 PYSVIRG-EAFTLKATVLNYLPK-CIRVSVQLE--ASPAFLAVPVEKEQAPHCICANGRQTVSWAVTPKSLGNVNFTVSA 851 (1451)
T ss_dssp CSEEESS-SCEEEEEEEEECSSS-CEEEEEEEC--CCTTEEEEESCSCCCCEEECTTEEEEEEEEEEECSCEEEEEEEEE
T ss_pred CceEecC-CEEEEEEEEEeccCc-cEEEEEEEE--cCCCeEeecCCCCceEEEECCCCeEEEEEEEEECccceEEEEEEE
Confidence 5667777 999999999999874 445555421 234688876532222236999999999999999999998886544
Q ss_pred EE
Q 031694 119 IT 120 (155)
Q Consensus 119 Vt 120 (155)
..
T Consensus 852 ~~ 853 (1451)
T 4acq_A 852 EA 853 (1451)
T ss_dssp EE
T ss_pred EE
Confidence 33
No 19
>3prx_B Cobra venom factor; immune system, complement, immune SYS complex; HET: NAG; 4.30A {Naja kaouthia} PDB: 3pvm_B*
Probab=84.76 E-value=3.7 Score=41.52 Aligned_cols=73 Identities=14% Similarity=0.043 Sum_probs=52.8
Q ss_pred ccccccCceeEEEEEEEEecCCcceeeEEEecCCCCCCCceEecC---ceeeeeeeecCCcceEEEEEEEEceeeeEEee
Q 031694 39 LKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISG---NISQSWERLDAGGILSHSFELDAKVKGMFHGS 115 (155)
Q Consensus 39 ~~~~v~g~~~vtV~ytIYNvG~s~A~dV~l~D~sfp~~~F~~v~G---~~s~~~~ri~pg~nvsH~~vv~p~~~G~f~~t 115 (155)
...++.| +.+.+..+|||..+.. ..|++.= -.++.|.+.+. ....+ -.|++|+..+..+.|+|++.|..+++
T Consensus 821 Pysv~rG-Eq~~l~v~VfNy~~~~-~~V~V~L--~~s~~~~~~~~~~~~~~q~-v~v~a~~~~~v~f~i~p~~~G~~~i~ 895 (1642)
T 3prx_B 821 PYSVVKN-EQVEIRAILHNYVNED-IYVRVEL--LYNPAFCSASTKGQRYRQQ-FPIKALSSRAVPFVIVPLEQGLHDVE 895 (1642)
T ss_dssp CSCEETT-CCEEEEEEEEECSSSC-EEEEEEE--CCCTTEEESCCSSSCCEEE-EEECSSEEEEEEEEEEECSCEEEEEE
T ss_pred CCEEecC-CEEEEEEEEEcCCCCc-EEEEEEE--EcCCCeEeeccCCCcceeE-EEECCCCeEEEEEEEEEeecccEEEE
Confidence 4455666 9999999999999854 4554441 12356766542 12233 38999999999999999999998876
Q ss_pred c
Q 031694 116 P 116 (155)
Q Consensus 116 ~ 116 (155)
-
T Consensus 896 v 896 (1642)
T 3prx_B 896 I 896 (1642)
T ss_dssp E
T ss_pred E
Confidence 5
No 20
>2hr0_B Complement C3 alpha' chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2icf_B* 2wii_B* 2win_B* 3g6j_B 3l5n_B* 2a73_B* 2i07_B* 2xwj_B* 2xwb_B* 2a74_C* 2ice_C* 2qki_C* 3l3o_F* 3nms_C* 3nsa_C* 3ohx_C* 3t4a_C 2ice_B* 3l3o_B* 3nms_B* ...
Probab=83.76 E-value=5.1 Score=37.60 Aligned_cols=85 Identities=9% Similarity=0.032 Sum_probs=57.6
Q ss_pred eEEEEeee-----cccccccCceeEEEEEEEEecCCcceeeEEEecCCCCCCCceEecC---ceeeeeeeecCCcceEEE
Q 031694 30 FIVAHKKA-----SLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISG---NISQSWERLDAGGILSHS 101 (155)
Q Consensus 30 ~LlvsK~i-----~~~~~v~g~~~vtV~ytIYNvG~s~A~dV~l~D~sfp~~~F~~v~G---~~s~~~~ri~pg~nvsH~ 101 (155)
.+.|.|-+ +...++.| +.+.+..+|+|..+..+.+|++.=. ..+.|.+.+. ....++ .|++|+..+..
T Consensus 74 ~~~v~kp~~v~~~LP~~v~~G-D~~~i~~~v~N~~~~~~~~v~v~l~--~~~~~~~~~~~~~~~~~~v-~l~~~~~~~v~ 149 (915)
T 2hr0_B 74 EVTVMQDFFIDLRLPYSVVRN-EQVEIRAVLYNYRQNQELKVRVELL--HNPAFCSLATTKRRHQQTV-TIPPKSSLSVP 149 (915)
T ss_dssp EEEECCSSEEEEECCSEEETT-CCEEEEEEEEECCSSCCEEEEEEEC--CCTTEECSCCSSSCEEEEE-EECTTEEEEEE
T ss_pred eEEEeccEEEEccCCCEEecC-cEEEEEEEEEcCCCCeeEEEEEEEe--cCCceEeecCCCCcceeEE-EECCCCeEEEE
Confidence 45555543 24456777 9999999999998723455665522 2345655432 122333 78999999999
Q ss_pred EEEEEceeeeEEeecEE
Q 031694 102 FELDAKVKGMFHGSPAL 118 (155)
Q Consensus 102 ~vv~p~~~G~f~~t~A~ 118 (155)
+.|+|.+.|..+++-.-
T Consensus 150 f~i~~~~~G~~~i~v~a 166 (915)
T 2hr0_B 150 YVIVPLKTGLQEVEVKA 166 (915)
T ss_dssp EEEEECSCEEEEEEEEE
T ss_pred EEEEECccceEEEEEEE
Confidence 99999999988875443
No 21
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=83.62 E-value=2.3 Score=30.78 Aligned_cols=46 Identities=15% Similarity=0.169 Sum_probs=26.6
Q ss_pred EEecCCcceeeEEEecCCCCCCCceEecCceeeeeeeecCCcceEEEEEEEEceeeeEEe
Q 031694 55 IHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHG 114 (155)
Q Consensus 55 IYNvG~s~A~dV~l~D~sfp~~~F~~v~G~~s~~~~ri~pg~nvsH~~vv~p~~~G~f~~ 114 (155)
+.|.+. ...+|.+.+...+...|+ =..|+||++.+++| .+.|.|.+
T Consensus 72 ~~N~d~-~~H~v~~~~~~~g~~~~~---------s~~l~pG~t~~~tF----~~~G~y~y 117 (132)
T 3c75_A 72 WVNGEV-MPHNVAFKKGIVGEDAFR---------GEMMTKDQAYAITF----NEAGSYDY 117 (132)
T ss_dssp EEECSS-SCBCCEECTTTSSSSCEE---------CCCBCTTEEEEEEE----CSCEEEEE
T ss_pred EEECCC-CceEEEEeCCCCCccccc---------ccccCCCCEEEEEc----CCCEEEEE
Confidence 347764 456777765322222222 12578999888776 46676655
No 22
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=82.90 E-value=2.7 Score=28.25 Aligned_cols=52 Identities=15% Similarity=0.213 Sum_probs=32.2
Q ss_pred EEecCCcceeeEEEecCCCCCCCceEecCceeeeeeeecCCcceEEEEEEEEceeeeEEe
Q 031694 55 IHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHG 114 (155)
Q Consensus 55 IYNvG~s~A~dV~l~D~sfp~~~F~~v~G~~s~~~~ri~pg~nvsH~~vv~p~~~G~f~~ 114 (155)
+.|.+. ...+|.+.+..+|.. |+ ++..+..=..+.||++.+++| .+.|.|.+
T Consensus 30 ~~n~~~-~~H~v~~~~~~~p~g-~~--~~~~~~~~~~~~~g~~~~~tf----~~~G~y~y 81 (98)
T 1iuz_A 30 FVNNAG-FPHNIVFDEDAVPAG-VD--ADAISYDDYLNSKGETVVRKL----STPGVYGV 81 (98)
T ss_dssp EEECSS-CCEEEEECTTSSCTT-CC--HHHHCEEEEECSTTCEEEEEC----CSCEEEEE
T ss_pred EEECCC-CCEEEEEeCCCCccc-cc--cccccccccccCCCCEEEEEc----CCCEEEEE
Confidence 348864 678999887667743 32 222222223689999888766 46676654
No 23
>2b39_A C3; thioester, immune defense, immune system; HET: NAG BMA; 3.00A {Bos taurus}
Probab=81.99 E-value=10 Score=38.00 Aligned_cols=77 Identities=9% Similarity=0.034 Sum_probs=54.5
Q ss_pred ccccccCceeEEEEEEEEecCCcceeeEEEecCCCCCCCceEecCc---eeeeeeeecCCcceEEEEEEEEceeeeEEee
Q 031694 39 LKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGN---ISQSWERLDAGGILSHSFELDAKVKGMFHGS 115 (155)
Q Consensus 39 ~~~~v~g~~~vtV~ytIYNvG~s~A~dV~l~D~sfp~~~F~~v~G~---~s~~~~ri~pg~nvsH~~vv~p~~~G~f~~t 115 (155)
...++.| +.+.+..+|+|..+..+.+|++.=. ..+.|.+..+. ...+. .|++|+..+..+.|+|++.|..+++
T Consensus 835 P~sv~~G-D~~~i~~~V~N~~~~~~~~v~v~l~--~~~~~~~~~~~~~~~~~~v-~v~a~~~~~v~f~i~p~~~G~~~i~ 910 (1661)
T 2b39_A 835 PYSVVRN-EQVEIRAILYNYREAENLKVRVELL--YNPAFCSLATAKKRHQQTI-TIPARSSVAVPYVIVPLKIGLHEVE 910 (1661)
T ss_dssp CSCEESS-CEEEEEEEEEECCTTCCEEEEEEEC--CCTTEECSSCSSCCCEEEE-EECTTCEEEEEEEEEECSCEEEEEE
T ss_pred CcEEEeC-CEEEEEEEEEcCCCCccEEEEEEEc--CCCCeEeecCCCCcceEEE-EECCCCcEEEEEEEEEcccCeEEEE
Confidence 4466777 9999999999997724455665522 23456654431 22333 7899999999999999999988876
Q ss_pred cEEE
Q 031694 116 PALI 119 (155)
Q Consensus 116 ~A~V 119 (155)
-.--
T Consensus 911 v~a~ 914 (1661)
T 2b39_A 911 VKAA 914 (1661)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5443
No 24
>3cfu_A Uncharacterized lipoprotein YJHA; YJHA_bacsu, SR562, NESG, structural genomics, PSI-2, protein structure initiative; 2.40A {Bacillus subtilis}
Probab=78.59 E-value=12 Score=28.22 Aligned_cols=61 Identities=18% Similarity=0.226 Sum_probs=41.2
Q ss_pred ccCceeEEEEEEEEecCCcce----eeEEEec-CC--CCCCCceEecCce-eeeeeeecCCcceEEEEEEE
Q 031694 43 KSGAERISVSIDIHNQGTSTA----YDVSLTD-DS--WPQDKFDVISGNI-SQSWERLDAGGILSHSFELD 105 (155)
Q Consensus 43 v~g~~~vtV~ytIYNvG~s~A----~dV~l~D-~s--fp~~~F~~v~G~~-s~~~~ri~pg~nvsH~~vv~ 105 (155)
..|++=+.|.++|-|.|+.+. ++.+|.| ++ +.. .+. ..+.. ......|.||..++=.++..
T Consensus 43 ~~G~~fviV~VTIeN~g~e~~~~s~~~F~L~d~dG~~~~~-~~~-~~~~~~~l~~g~L~pG~kvtG~ivFe 111 (159)
T 3cfu_A 43 KDDEERLIIEVTMENIGEDSISYNFIGFDLRDKNDQSVRP-VFS-IEEKGRILMGGTLVSGKKVTGVLSYV 111 (159)
T ss_dssp CCCSEEEEEEEEEEECSSSCEEEEGGGEEEECTTCCBCCC-EEC-STTTTTBCCEEEECTTCEEEEEEEEE
T ss_pred CCCCEEEEEEEEEEECCCCceeeCcccEEEEeCCCCEEec-eee-ecccCCcccccccCCCCEEEEEEEEE
Confidence 567689999999999998743 4677765 33 222 221 12221 23346999999999888887
No 25
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=78.31 E-value=3.7 Score=27.74 Aligned_cols=47 Identities=15% Similarity=0.217 Sum_probs=28.1
Q ss_pred EEEEEEEecCCcceeeEEEecCCCCCCCceEecCceeeeeeeecCCcceEEEEEEEEceeeeEEe
Q 031694 50 SVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHG 114 (155)
Q Consensus 50 tV~ytIYNvG~s~A~dV~l~D~sfp~~~F~~v~G~~s~~~~ri~pg~nvsH~~vv~p~~~G~f~~ 114 (155)
+|++.+.|.|..+ .++.+.+..+ + ..+.||++.+. .+++.+.|.|.+
T Consensus 37 tV~~~~~n~d~~~-H~~~~~~~~~--------------~-~~~~pg~~~~~--~~t~~~~G~Y~y 83 (100)
T 4hci_A 37 STTLLLKNKGKSE-HTFTIKKLGI--------------D-VVVESGKEKNI--TVKPKSAGTYEL 83 (100)
T ss_dssp CEEEEEEECSSSC-EEEEEGGGTE--------------E-EEECTTCEEEE--EECCCSCEEEEE
T ss_pred EEEEEEEcCCCce-EEEEEecCCc--------------c-eeecCCcceeE--EEecccCceEEE
Confidence 4556667877643 5666554321 1 25788887654 446788887755
No 26
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=78.08 E-value=2.8 Score=30.65 Aligned_cols=64 Identities=16% Similarity=0.243 Sum_probs=36.6
Q ss_pred EEEEEEEecCCcc----eeeEEEecCCC------------CCCCceEecCceeee--eeeecCCcceEEEEEEEEceeee
Q 031694 50 SVSIDIHNQGTST----AYDVSLTDDSW------------PQDKFDVISGNISQS--WERLDAGGILSHSFELDAKVKGM 111 (155)
Q Consensus 50 tV~ytIYNvG~s~----A~dV~l~D~sf------------p~~~F~~v~G~~s~~--~~ri~pg~nvsH~~vv~p~~~G~ 111 (155)
+|++++-|.|.-+ -.++.|.+..- +...| +..+..... =..|.||++.++++.....+.|.
T Consensus 27 ~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~-~~~~~~~~~~~t~~l~pGes~~vtf~~~~l~~G~ 105 (128)
T 2iaa_C 27 EFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDY-VKAGDERVIAHTSVIGGGETDSVTFDVSKLKEGE 105 (128)
T ss_dssp EEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTT-SCTTCTTEEEECCCBCTTCEEEEEEESSCCCTTC
T ss_pred EEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccc-cccccchhhccceeeCCCCEEEEEEeccccCCCc
Confidence 4457788999876 78998886421 00011 111222222 23689999999888654345553
Q ss_pred -EEe
Q 031694 112 -FHG 114 (155)
Q Consensus 112 -f~~ 114 (155)
|.|
T Consensus 106 ~Y~f 109 (128)
T 2iaa_C 106 DYAF 109 (128)
T ss_dssp CEEE
T ss_pred eEEE
Confidence 544
No 27
>3es6_B Prolactin-inducible protein; major histocompatibility complex, protein-protein complex, P inducible protein, zinc 2-glycoprotein, ZAG-PIP complex; HET: NDG NAG BMA MAN P6G; 3.23A {Homo sapiens} SCOP: b.1.18.23
Probab=77.39 E-value=15 Score=26.61 Aligned_cols=69 Identities=3% Similarity=0.003 Sum_probs=47.4
Q ss_pred cccCceeEEEEEEEEecCCc-ceeeEEEecCCCCCCCceEecCceeeeeeeecCCcceEEEEEEEEceeeeEEeecEEE
Q 031694 42 LKSGAERISVSIDIHNQGTS-TAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALI 119 (155)
Q Consensus 42 ~v~g~~~vtV~ytIYNvG~s-~A~dV~l~D~sfp~~~F~~v~G~~s~~~~ri~pg~nvsH~~vv~p~~~G~f~~t~A~V 119 (155)
.+-| ++++++.++||.=.. -...|.|.. ++.|+...+. ..=.-|.+|+..++.+.++|. |..||+..--
T Consensus 18 v~rg-E~~~~~~~V~nyl~~~~~v~v~L~~----s~~~~~~~~~--~~t~Clc~~~~~t~~W~i~~l--g~vniTvsAe 87 (118)
T 3es6_B 18 VRPN-DEVTAVLAVQTELKECMVVKTYLIS----SIPLQGAFNY--KYTACLCDDNPKTFYWDFYTN--RTVQIAAVVD 87 (118)
T ss_dssp ECSS-CCEEEEEEEEECCSSCEEEEEEEEE----SSCCCSGGGC--EEEEEECSSSCEEEEEEECCS--SCEEEEEEEE
T ss_pred EecC-CEEEEEEEEEecccceEEEEEEecC----CcCEEccCCC--cccEEecCCCceEEEEEEEeC--CeEEEEEEEE
Confidence 4556 999999999999876 344566653 3456544433 233469999999999999885 6666654443
No 28
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=75.80 E-value=8.8 Score=28.46 Aligned_cols=62 Identities=13% Similarity=0.113 Sum_probs=35.5
Q ss_pred EEEEEEEecCCcceeeEEEecCCCCCCC----ceEecCceeeeeeeecCCcceEEEEEEEEceeeeEEe
Q 031694 50 SVSIDIHNQGTSTAYDVSLTDDSWPQDK----FDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHG 114 (155)
Q Consensus 50 tV~ytIYNvG~s~A~dV~l~D~sfp~~~----F~~v~G~~s~~~~ri~pg~nvsH~~vv~p~~~G~f~~ 114 (155)
+|++++.|.|+....++.+...+-+-+. -.++.+.. ....|.||++-+.+++.++ +.|.|.|
T Consensus 70 ~V~~~~tN~~~~~~H~~~i~~~~~~~~~~~~~~~~~~~~~--~~~~i~PG~sgt~t~tft~-~pGtY~y 135 (154)
T 2cal_A 70 TVDVTFINTNKGFGHSFDITKKGPPYAVMPVIDPIVAGTG--FSPVPKDGKFGYTDFTWHP-TAGTYYY 135 (154)
T ss_dssp EEEEEEEECCTTCCCCCEEESCCSCCCSSCCCCSEEEEBC--CCCCCBTTBEEEEEEEECC-CSEEEEE
T ss_pred EEEEEEEcCCCCeeeEEEEeecCcchhccccccccccccc--cccccCCCCceEEEEEEEE-CCceEEE
Confidence 4556777887666788888743211111 11222210 1127899996666666667 8887765
No 29
>2pn5_A TEP1R, thioester-containing protein I; FULL-length mature peptide, immune system; HET: NAG; 2.70A {Anopheles gambiae}
Probab=74.86 E-value=15 Score=35.58 Aligned_cols=74 Identities=15% Similarity=0.121 Sum_probs=51.1
Q ss_pred ccccccCceeEEEEEEEEecCCcceeeEEEecCCCCCCCceEecCc-----eeeeeeeecCCcceEEEEEEEEceeeeEE
Q 031694 39 LKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGN-----ISQSWERLDAGGILSHSFELDAKVKGMFH 113 (155)
Q Consensus 39 ~~~~v~g~~~vtV~ytIYNvG~s~A~dV~l~D~sfp~~~F~~v~G~-----~s~~~~ri~pg~nvsH~~vv~p~~~G~f~ 113 (155)
...++.| +.+.+..+|+|..+.+ .+|++.=. -+.+.+++++.. .+.+. .|++|+..+..+.|+|.+.|..+
T Consensus 673 P~~v~~G-d~~~l~~~v~N~~~~~-~~v~v~l~-~~~~~~~~~~~~~~~~~~~~~v-~v~~~~~~~v~f~i~~~~~G~~~ 748 (1325)
T 2pn5_A 673 PYSIKRG-EAVVLQFTLFNNLGAE-YIADVTLY-NVANQTEFVGRPNTDLSYTKSV-SVPPKVGVPISFLIKARKLGEMA 748 (1325)
T ss_dssp CSEEETT-CEEEEEEEEEECSSSC-EEEEEEEE-CGGGCEEETTSCTTCCEEEEEE-EECTTCCEEEEEEEEECSSEEEE
T ss_pred CcEEEcC-CEEEEEEEEEeCCCCc-EEEEEEEe-ecCCceEEeccCCCCCcceEEE-EECCCCeEEEEEEEEEcccceEE
Confidence 4567777 9999999999997753 45555421 111236665532 12333 78999999999999999988777
Q ss_pred eec
Q 031694 114 GSP 116 (155)
Q Consensus 114 ~t~ 116 (155)
++-
T Consensus 749 i~v 751 (1325)
T 2pn5_A 749 VRV 751 (1325)
T ss_dssp EEE
T ss_pred EEE
Confidence 643
No 30
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=74.16 E-value=6.8 Score=26.88 Aligned_cols=46 Identities=15% Similarity=0.169 Sum_probs=27.9
Q ss_pred EEecCCcceeeEEEecCCCCCCCceEecCceeeeeeeecCCcceEEEEEEEEceeeeEEe
Q 031694 55 IHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHG 114 (155)
Q Consensus 55 IYNvG~s~A~dV~l~D~sfp~~~F~~v~G~~s~~~~ri~pg~nvsH~~vv~p~~~G~f~~ 114 (155)
+.|.+. ...+|.+.+...+...|+ -..|+||++.+++| .+.|.|.+
T Consensus 46 ~~N~d~-~~H~v~~~~~~~~~~~~~---------s~~l~~g~~~~~tf----~~~G~y~~ 91 (106)
T 1id2_A 46 WVNGEV-MPHNVAFKKGIVGEDAFR---------GEMMTKDQAYAITF----NEAGSYDY 91 (106)
T ss_dssp EEECSS-SCBCCEECTTTSSSSCEE---------CCCBCTTEEEEEEE----CSCEEEEE
T ss_pred EEECCC-CcEEEEEeCCCCCccccc---------ccccCCCCEEEEEe----CCCEEEEE
Confidence 348875 567777765433222231 12588999888776 46677655
No 31
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=73.02 E-value=7.1 Score=36.03 Aligned_cols=83 Identities=16% Similarity=0.137 Sum_probs=55.2
Q ss_pred eeEEEEEEEEecCCcceeeEEEecCCCCCC-----CceEecCceeeeeeeecCCcceEEEEEEEEceeeeEEeecEEEEE
Q 031694 47 ERISVSIDIHNQGTSTAYDVSLTDDSWPQD-----KFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITF 121 (155)
Q Consensus 47 ~~vtV~ytIYNvG~s~A~dV~l~D~sfp~~-----~F~~v~G~~s~~~~ri~pg~nvsH~~vv~p~~~G~f~~t~A~VtY 121 (155)
..++|+++|-|.|+-+..+|.-.=-+.|.. .=++. |- .|.+.|+||++.+-++.|.++...+|+ .-.|
T Consensus 615 ~~~~v~v~VtNtG~~~G~eVvQlYv~~~~~~~~~P~k~L~-gF--~kv~~L~pGes~~V~~~l~~~~l~~~d----~~~~ 687 (721)
T 2x41_A 615 ETLRVQYRIENTGGRAGKEVSQVYIKAPKGKIDKPFQELK-AF--HKTRLLNPGESEEVVLEIPVRDLASFN----GEEW 687 (721)
T ss_dssp SEEEEEEEEEECSSSCBCCEEEEEEECCCSSSCCCSCEEE-EE--EECCCBCTTCEEEEEEEEEGGGGCEEC----SSCE
T ss_pred CeEEEEEEEEECCCCCCcEEeeEEEccCCCCCCCchHHhh-cc--cccccCCCCCeEEEEEEECHHHhcEEc----CCeE
Confidence 689999999999999887764332222221 11111 11 123346999999999999999999998 2346
Q ss_pred EcCCcc-ceeEEeecC
Q 031694 122 RIPTKA-ALQEAYSTP 136 (155)
Q Consensus 122 ~~se~~-~~q~a~Ss~ 136 (155)
..+.+. .+.+|.||.
T Consensus 688 ~~e~G~y~v~vG~ss~ 703 (721)
T 2x41_A 688 VVEAGEYEVRVGASSR 703 (721)
T ss_dssp EECCEEEEEEEEEETT
T ss_pred EEeCceEEEEEECCCC
Confidence 666663 456777774
No 32
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=71.95 E-value=14 Score=27.06 Aligned_cols=72 Identities=11% Similarity=0.105 Sum_probs=47.0
Q ss_pred CCceEEEEeeec-ccccccCceeEEEEEEEEecCCcceeeEEEecC----CCCCCCceEecCceeeeeeeecCCcceEEE
Q 031694 27 DVPFIVAHKKAS-LKRLKSGAERISVSIDIHNQGTSTAYDVSLTDD----SWPQDKFDVISGNISQSWERLDAGGILSHS 101 (155)
Q Consensus 27 ~~a~LlvsK~i~-~~~~v~g~~~vtV~ytIYNvG~s~A~dV~l~D~----sfp~~~F~~v~G~~s~~~~ri~pg~nvsH~ 101 (155)
..|.+-++++.+ =-.+..+ +..+-+++|.|.|.-+|. .++... ...+.-|.+- -.-..|+||+++.-.
T Consensus 23 ~~P~i~v~~~~ldFG~v~~~-~~~~~~l~I~Ntg~vpa~-F~f~~~~~~~~~~~~wl~v~-----P~~G~L~Pge~~~I~ 95 (140)
T 3qbt_B 23 FLPSLELSRREFVFENVKFR-QLQKEKFQISNNGQVPCH-FSFIPKLNDSQYCKPWLRAE-----PFEGYLEPNETVDIS 95 (140)
T ss_dssp TSCCEEESCCEEEEEEECBT-CCEEEEEEEEECSSSCEE-EEEECCTTCSSSSCTTEEEE-----SCEEEECTTCEEEEE
T ss_pred cCCceEeeeeeEEeeeceee-eeeeeEEEEEcCCccceE-EEEecCCCchhhhhHhhhcC-----CcccccCCCCeeEEE
Confidence 346666665433 2345556 788999999999999993 444421 1223345442 234689999998888
Q ss_pred EEEE
Q 031694 102 FELD 105 (155)
Q Consensus 102 ~vv~ 105 (155)
+++.
T Consensus 96 v~~~ 99 (140)
T 3qbt_B 96 LDVY 99 (140)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 8876
No 33
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=69.54 E-value=11 Score=26.77 Aligned_cols=63 Identities=13% Similarity=0.140 Sum_probs=35.0
Q ss_pred EEEEEEEEecCCcceeeEEEecCCCC--------------CCCceEecCceeeeee--eecCCcceEEEEEEEEceeeeE
Q 031694 49 ISVSIDIHNQGTSTAYDVSLTDDSWP--------------QDKFDVISGNISQSWE--RLDAGGILSHSFELDAKVKGMF 112 (155)
Q Consensus 49 vtV~ytIYNvG~s~A~dV~l~D~sfp--------------~~~F~~v~G~~s~~~~--ri~pg~nvsH~~vv~p~~~G~f 112 (155)
=+|++++.|.|..+..++.+.+...+ .+.| +-.+....-|+ .|.||++.+.+|. +.+.|.|
T Consensus 43 ~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~-~p~~~~~~~~~t~~l~pGet~~v~f~--~~~pG~y 119 (139)
T 2aan_A 43 QTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANY-LPADKSNIIAESPLANGNETVEVTFT--APAAGTY 119 (139)
T ss_dssp CEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTT-CCSCCTTEEEECCCBCTTCEEEEEEE--CCSSEEE
T ss_pred CEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccc-cCcccccccccccccCCCCEEEEEEE--CCCCeEE
Confidence 45667888998653678888753210 0001 00111112222 3899999887765 4467776
Q ss_pred Ee
Q 031694 113 HG 114 (155)
Q Consensus 113 ~~ 114 (155)
.|
T Consensus 120 ~f 121 (139)
T 2aan_A 120 LY 121 (139)
T ss_dssp EE
T ss_pred EE
Confidence 55
No 34
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=68.14 E-value=4.3 Score=29.57 Aligned_cols=54 Identities=17% Similarity=0.286 Sum_probs=30.7
Q ss_pred EEEEEEEecCCcc----eeeEEEecCCC------------CCCCceEecCceeee--eeeecCCcceEEEEEE
Q 031694 50 SVSIDIHNQGTST----AYDVSLTDDSW------------PQDKFDVISGNISQS--WERLDAGGILSHSFEL 104 (155)
Q Consensus 50 tV~ytIYNvG~s~----A~dV~l~D~sf------------p~~~F~~v~G~~s~~--~~ri~pg~nvsH~~vv 104 (155)
+|++++-|.|.-+ -.++.|.+.+- +...| +..+..... =..|.||++.+.++..
T Consensus 28 ~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~t~~l~pGet~svtf~~ 99 (129)
T 2ccw_A 28 QFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDY-VKAGDTRVIAHTKVIGGGESDSVTFDV 99 (129)
T ss_dssp EEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTT-SCTTCTTEEEECCCBCTTCEEEEEEEG
T ss_pred EEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccc-cccccccceeeeeEECCCCEEEEEEec
Confidence 3457778999876 68888876320 00111 111222221 1358999988888864
No 35
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=66.40 E-value=5.4 Score=29.07 Aligned_cols=64 Identities=11% Similarity=0.293 Sum_probs=34.9
Q ss_pred EEEEEEEecCCcc----eeeEEEecCC---------CC---CCCceEecCceeee--eeeecCCcceEEEEEEEEceeee
Q 031694 50 SVSIDIHNQGTST----AYDVSLTDDS---------WP---QDKFDVISGNISQS--WERLDAGGILSHSFELDAKVKGM 111 (155)
Q Consensus 50 tV~ytIYNvG~s~----A~dV~l~D~s---------fp---~~~F~~v~G~~s~~--~~ri~pg~nvsH~~vv~p~~~G~ 111 (155)
+|++++-|.|.-+ ..++.|.+.+ .+ ...| +-.+..... -..|.||++.+.++.....+.|.
T Consensus 28 ~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~-~~~~~~~~~~~t~~l~pGet~svtf~~~~l~~G~ 106 (128)
T 1nwp_A 28 TFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQY-LKDGDARVIAHTKVIGAGEKDSVTFDVSKLAAGE 106 (128)
T ss_dssp EEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTT-SCTTCTTEEEECCCBCTTCEEEEEEEGGGSCTTS
T ss_pred EEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccc-cccccchhheeeeeeCCCCEEEEEEeccccCCCc
Confidence 4557788999876 6888887531 10 0111 111222222 23589999998888653223443
Q ss_pred -EEe
Q 031694 112 -FHG 114 (155)
Q Consensus 112 -f~~ 114 (155)
|.|
T Consensus 107 ~Y~f 110 (128)
T 1nwp_A 107 KYGF 110 (128)
T ss_dssp CEEE
T ss_pred eEEE
Confidence 443
No 36
>3ugu_A S-arrestin; arrestin fold, signal termination, GPCR, outer segment, SIGN protein; 1.85A {Bos taurus} PDB: 3ugx_A 1cf1_A 1ayr_A
Probab=66.35 E-value=27 Score=30.40 Aligned_cols=72 Identities=15% Similarity=0.207 Sum_probs=47.3
Q ss_pred eecccccccCceeEEEEEEEEecCCcceeeEEEe-----c-CCCCCCCceEecCceeeeeeeecCCcceEEEEEEEEcee
Q 031694 36 KASLKRLKSGAERISVSIDIHNQGTSTAYDVSLT-----D-DSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVK 109 (155)
Q Consensus 36 ~i~~~~~v~g~~~vtV~ytIYNvG~s~A~dV~l~-----D-~sfp~~~F~~v~G~~s~~~~ri~pg~nvsH~~vv~p~~~ 109 (155)
++..+-+..| +.|.|+++|-|.-+.+...|++. | --|..+.|.-.--+. ..=|.|+||++.+++|.++|.-.
T Consensus 218 sLdK~~Y~pG-E~I~V~v~I~N~Ssk~Vk~Ikv~L~Q~~~v~l~s~~~y~~~Va~~-E~~epV~pgst~~k~~~l~P~l~ 295 (380)
T 3ugu_A 218 SLSKEIYYHG-EPIPVTVAVTNSTEKTVKKIKVLVEQVTNVVLYSSDYYIKTVAAE-EAQEKVPPNSSLTKTLTLVPLLA 295 (380)
T ss_dssp EESCSEEETT-CCEEEEEEEEECSSSCEEEEEEEEEEEEEECSSSCCEEEEEEEEE-ECSCCBCTTEEEEEEEEECCCGG
T ss_pred EeCCccCcCC-CEEEEEEEEEcCCCCeEeEEEEEEEEEEEEEEecCCeEEEEEEEe-ccCCcCCCCCeEEeeEEEEEecc
Confidence 3445667778 99999999999999887765432 2 224444333221000 01137999999999999999753
No 37
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=64.84 E-value=5.3 Score=30.67 Aligned_cols=63 Identities=11% Similarity=0.166 Sum_probs=35.9
Q ss_pred EEEEEEecCCcc----eeeEEEecCCCCC-----------CCceEecCceee--eeeeecCCcceEEEEEEEEceeeeEE
Q 031694 51 VSIDIHNQGTST----AYDVSLTDDSWPQ-----------DKFDVISGNISQ--SWERLDAGGILSHSFELDAKVKGMFH 113 (155)
Q Consensus 51 V~ytIYNvG~s~----A~dV~l~D~sfp~-----------~~F~~v~G~~s~--~~~ri~pg~nvsH~~vv~p~~~G~f~ 113 (155)
|++++-|.|+.+ -.++.|.+.+-.. ..| +-.+.... .=..|.||++.+.+|.+.+.+.|.|.
T Consensus 69 Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~-v~~~d~~vl~~t~~l~pGet~svtf~~~~lkpG~Y~ 147 (167)
T 3ay2_A 69 FTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDY-VKPDDARVVAHTKLIGGGEESSLTLDPAKLADGDYK 147 (167)
T ss_dssp EEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTT-SCTTCTTEEEECCCBCTTCEEEEEECGGGGTTSCEE
T ss_pred EEEEEEECCCCccccccceEEeccCcchhhhHHHhhhcccccc-ccccccchhccceeeCCCCEEEEEEecCCCCCcEEE
Confidence 457788999876 5888887532100 000 11111111 12368899988888865445677766
Q ss_pred e
Q 031694 114 G 114 (155)
Q Consensus 114 ~ 114 (155)
|
T Consensus 148 f 148 (167)
T 3ay2_A 148 F 148 (167)
T ss_dssp E
T ss_pred E
Confidence 5
No 38
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=64.65 E-value=10 Score=24.99 Aligned_cols=60 Identities=20% Similarity=0.288 Sum_probs=34.4
Q ss_pred cccCceeEEEEEEEEecCCcceeeEEEecCCCCCCCceEecCceeeeeeeecCCcceEEEEEEEEceeeeEEe
Q 031694 42 LKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHG 114 (155)
Q Consensus 42 ~v~g~~~vtV~ytIYNvG~s~A~dV~l~D~sfp~~~F~~v~G~~s~~~~ri~pg~nvsH~~vv~p~~~G~f~~ 114 (155)
+..| +.++ +.|.+. ...++.+.+..+|.. |+ .|.....=..|+||++.+++|. +.|.|.|
T Consensus 22 v~~G-~~V~----~~n~~~-~~H~~~~~~~~~p~~-~~--~~~~~~~~~~~~pG~~~~~tf~----~~G~y~y 81 (98)
T 2plt_A 22 IKSG-ETVN----FVNNAG-FPHNIVFDEDAIPSG-VN--ADAISRDDYLNAPGETYSVKLT----AAGEYGY 81 (98)
T ss_dssp ECTT-CEEE----EEECSS-CCEEEEECGGGSCTT-CC--HHHHCEEEEECSTTCEEEEECC----SCEEEEE
T ss_pred ECCC-CEEE----EEECCC-CceEEEEeCCCCCCc-cc--cccccccceecCCCCEEEEEeC----CCeEEEE
Confidence 4456 5433 468874 568999887666543 21 1111222236899998887663 5566544
No 39
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=60.89 E-value=12 Score=27.17 Aligned_cols=45 Identities=7% Similarity=0.133 Sum_probs=28.9
Q ss_pred EEEecCCcceeeEEEecCCCCCCCceEecCceeeeeeeecCCcceEEEEEEEEceeeeEEe
Q 031694 54 DIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHG 114 (155)
Q Consensus 54 tIYNvG~s~A~dV~l~D~sfp~~~F~~v~G~~s~~~~ri~pg~nvsH~~vv~p~~~G~f~~ 114 (155)
+..|.+ ...+|...|..+|...- .| .+.||++.+|+| .+.|.|.+
T Consensus 33 ~f~n~~--~~Hnv~~~~~~~p~g~~---------~~-~~~pg~t~s~TF----~~~G~y~Y 77 (124)
T 3ef4_A 33 KFVPTD--KSHNAESVREVWPEGVA---------PV-KGGFSKEVVFNA----EKEGLYVL 77 (124)
T ss_dssp EEECSS--SSCCCEECTTTSCTTSC---------CC-BCCTTCCEEEEC----CSSEEEEE
T ss_pred EEEECC--CCccEEEeCCcCCCCcc---------cc-ccCCCCEEEEEe----CCCeEEEE
Confidence 345666 57889888777775321 11 246999988888 45566543
No 40
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=60.35 E-value=31 Score=23.31 Aligned_cols=23 Identities=30% Similarity=0.303 Sum_probs=17.2
Q ss_pred eecCCcceEEEEEEEEceeeeEEee
Q 031694 91 RLDAGGILSHSFELDAKVKGMFHGS 115 (155)
Q Consensus 91 ri~pg~nvsH~~vv~p~~~G~f~~t 115 (155)
.++||++.+..+. +.+.|.|.+-
T Consensus 72 ~i~pG~~~~~~f~--~~~~G~y~~~ 94 (112)
T 1iby_A 72 VIKAGETKTISFT--ADKAGAFTIW 94 (112)
T ss_dssp EECTTCEEEEEEE--CCSCEEEEEB
T ss_pred EeCCCCEEEEEEE--CCCCEEEEEE
Confidence 5899998887774 6678877653
No 41
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=59.79 E-value=18 Score=25.97 Aligned_cols=36 Identities=11% Similarity=0.230 Sum_probs=24.3
Q ss_pred eeeEEEecCCCCCC--CceEecCceeeeeeeecCCcceEEEEEEEEceeeeEEe
Q 031694 63 AYDVSLTDDSWPQD--KFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHG 114 (155)
Q Consensus 63 A~dV~l~D~sfp~~--~F~~v~G~~s~~~~ri~pg~nvsH~~vv~p~~~G~f~~ 114 (155)
..+|...+..+|.. .|. +.||+..+++| .+.|.|.+
T Consensus 39 ~H~v~~~~~~~P~g~~~f~------------~~pg~t~s~TF----~~pG~y~y 76 (123)
T 3erx_A 39 SHNVEAIKEILPEGVESFK------------SKINESYTLTV----TEPGLYGV 76 (123)
T ss_dssp TCCCEECTTSSCTTCCCCB------------CCTTCCEEEEE----CSCEEEEE
T ss_pred CceEEEcCCcCCCCcccee------------cCCCCEEEEEe----CCCeEEEE
Confidence 38888877667753 342 35899888888 46677654
No 42
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=58.54 E-value=37 Score=31.32 Aligned_cols=85 Identities=16% Similarity=0.279 Sum_probs=54.7
Q ss_pred eeEEEEEEEEecCCcceeeEEEecCCCCCCC----ceEecCceeeeeeeecCCcceEEEEEEEEceeeeEEeecEEEEEE
Q 031694 47 ERISVSIDIHNQGTSTAYDVSLTDDSWPQDK----FDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITFR 122 (155)
Q Consensus 47 ~~vtV~ytIYNvG~s~A~dV~l~D~sfp~~~----F~~v~G~~s~~~~ri~pg~nvsH~~vv~p~~~G~f~~t~A~VtY~ 122 (155)
..++|+++|-|.|+-+..+|.-.=-+.|... -.-..|- .|. .|+||++.+-+|.|.++...+|+-.. -.|.
T Consensus 613 ~~~~vsv~VtNtG~~~G~EVvQlYv~~~~~~~~~P~k~L~gF--~kv-~L~pGes~~V~~~l~~~~ls~~d~~~--~~w~ 687 (713)
T 3zyz_A 613 NVATVTVDIANSGQVTGAEVAQLYITYPSSAPRTPPKQLRGF--AKL-NLTPGQSGTATFNIRRRDLSYWDTAS--QKWV 687 (713)
T ss_dssp EEEEEEEEEEECSSSCEEEEEEEEEECCTTSSSCCSCEEEEE--EEE-EECTTCEEEEEEEEEGGGGCEEETTT--TEEE
T ss_pred CeEEEEEEEEeCCCCccceeeeeeeecCCCCCCchhHHhhhc--ccc-eeCCCCeEEEEEEEcHHHeeeeecCC--CeEE
Confidence 6799999999999998877643322233211 0111221 123 39999999999999999998887532 1344
Q ss_pred cCCcc-ceeEEeecC
Q 031694 123 IPTKA-ALQEAYSTP 136 (155)
Q Consensus 123 ~se~~-~~q~a~Ss~ 136 (155)
.+.+. .+.+|.||.
T Consensus 688 ve~G~y~v~vG~sS~ 702 (713)
T 3zyz_A 688 VPSGSFGISVGASSR 702 (713)
T ss_dssp ECCEEEEEEEESSSS
T ss_pred EcCceEEEEEECCCC
Confidence 45553 355676664
No 43
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=57.71 E-value=10 Score=24.99 Aligned_cols=51 Identities=10% Similarity=0.103 Sum_probs=30.2
Q ss_pred EEEecCCcceeeEEEecCCCCCCCceEecCceeeeeeeecCCcceEEEEEEEEceeeeEEe
Q 031694 54 DIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHG 114 (155)
Q Consensus 54 tIYNvG~s~A~dV~l~D~sfp~~~F~~v~G~~s~~~~ri~pg~nvsH~~vv~p~~~G~f~~ 114 (155)
++.|.+. ...++.+.+..+|.+. . ..+..=..|.||++.+++| .+.|.|.+
T Consensus 30 ~~~n~~~-~~H~~~~~~~~~~~~~----~-~~~~~~~~~~~g~~~~~tf----~~~G~y~y 80 (97)
T 1b3i_A 30 EFVMNKV-GPHNVIFDKVPAGESA----P-ALSNTKLAIAPGSFYSVTL----GTPGTYSF 80 (97)
T ss_dssp EEEECSS-CCCCBEEEECCTTSCH----H-HHCBCCCCCSCSCCEEEEC----CSCSEEEE
T ss_pred EEEECCC-CCeEEEEeCCCCcccc----c-cccccceecCCCCEEEEEe----CCCeEEEE
Confidence 3448764 5678888876665431 0 0001113588999988866 46676654
No 44
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=56.97 E-value=15 Score=26.66 Aligned_cols=42 Identities=7% Similarity=0.154 Sum_probs=26.4
Q ss_pred EEecCCcceeeEEEecCCCCCC--CceEecCceeeeeeeecCCcceEEEEEEEEceeeeEEe
Q 031694 55 IHNQGTSTAYDVSLTDDSWPQD--KFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHG 114 (155)
Q Consensus 55 IYNvG~s~A~dV~l~D~sfp~~--~F~~v~G~~s~~~~ri~pg~nvsH~~vv~p~~~G~f~~ 114 (155)
+.|.+. ..+|...+..+|.. .|+ +.||++.+++| .+.|.|.+
T Consensus 35 f~n~~~--~H~v~~~~~~~P~g~~~f~------------s~pGet~s~TF----~~pG~y~y 78 (127)
T 3tu6_A 35 FVAKDK--GHNSALMKGGAPEGAETWK------------GKINEEITVTL----SKPGVYMY 78 (127)
T ss_dssp EECSSS--SCCCEECTTCSCTTCCCCB------------CCTTCCCEEEC----CSCEEEEE
T ss_pred EEECCC--CceEEEccCcCCCCcccee------------cCCCCEEEEEe----CCCeEEEE
Confidence 444443 58888877666653 232 25899888877 46676653
No 45
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=55.09 E-value=16 Score=23.98 Aligned_cols=51 Identities=18% Similarity=0.280 Sum_probs=28.3
Q ss_pred EEecCCcceeeEEEecCCCCCCCceEecCceeeeeeeecCCcceEEEEEEEEceeeeEEe
Q 031694 55 IHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHG 114 (155)
Q Consensus 55 IYNvG~s~A~dV~l~D~sfp~~~F~~v~G~~s~~~~ri~pg~nvsH~~vv~p~~~G~f~~ 114 (155)
+.|.+. ...++.+.+..+|... .+..+..=..|+||++.+++| .+.|.|.|
T Consensus 31 ~~n~~~-~~H~~~~~~~~~pg~~----~~~~~~~~~~~~pG~~~~~tf----~~~G~y~~ 81 (98)
T 1pcs_A 31 WVNNKL-SPHNIVFDADGVPADT----AAKLSHKGLLFAAGESFTSTF----TEPGTYTY 81 (98)
T ss_dssp EEECSS-CCEEEEECCSSSCHHH----HHHHCEEEEECSTTCEEEEEC----CSCEEEEE
T ss_pred EEECCC-CCcEEEEeCCCCCccc----cccccccccccCCCCEEEEEc----CCCeEEEE
Confidence 348764 5688888876555100 000111113578999888766 45676654
No 46
>3a0j_A Cold shock protein; OB-fold, cytoplasm, transcription, structural genomics, NPPSFA; 1.65A {Thermus thermophilus}
Probab=53.84 E-value=20 Score=23.43 Aligned_cols=45 Identities=16% Similarity=0.276 Sum_probs=32.0
Q ss_pred CCCCceEEEEeeeccc----ccccCceeEEEEEEEEe--cCCcceeeEEEecC
Q 031694 25 SSDVPFIVAHKKASLK----RLKSGAERISVSIDIHN--QGTSTAYDVSLTDD 71 (155)
Q Consensus 25 ~~~~a~LlvsK~i~~~----~~v~g~~~vtV~ytIYN--vG~s~A~dV~l~D~ 71 (155)
.+++..+++|.+-+.. .|.+| +.++++..--. -| -.|.+|.+.+.
T Consensus 20 ~~~g~dvFvH~s~i~~~g~~~l~~G-~~V~f~~~~~~~~kG-~~A~~V~~~~~ 70 (73)
T 3a0j_A 20 REGDTDVFVHYTAINAKGFRTLNEG-DIVTFDVEPGRNGKG-PQAVNVTVVEP 70 (73)
T ss_dssp CTTSCCEEEEGGGBCSSSCSSCCTT-CEEEEEEECCSCCSS-SEEEEEEEEEC
T ss_pred cCCCCcEEEEhhhccccCCCCCCCC-CEEEEEEEECCCCCC-CEEEEEEeCCC
Confidence 3456889999988764 57888 77776554444 44 47899999874
No 47
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=53.68 E-value=31 Score=23.27 Aligned_cols=46 Identities=13% Similarity=0.127 Sum_probs=25.7
Q ss_pred EEecCCcceeeEEEecCCCCCCCceEecCceeeeeeeecCCcceEEEEEEEEceeeeEEe
Q 031694 55 IHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHG 114 (155)
Q Consensus 55 IYNvG~s~A~dV~l~D~sfp~~~F~~v~G~~s~~~~ri~pg~nvsH~~vv~p~~~G~f~~ 114 (155)
+.|.+. ...+|.+.+.. .|.....-..|+||++.+++| .+.|.|.+
T Consensus 45 ~~N~d~-~~H~v~~~~~~---------~g~~~~~~~~~~pG~~~~~tf----~~~G~y~y 90 (105)
T 2ov0_A 45 WINREA-MPHNVHFVAGV---------LGEAALKGPMMKKEQAYSLTF----TEAGTYDY 90 (105)
T ss_dssp EEECSS-SCBCCEECTTT---------SSSSCEECCCBCTTEEEEEEE----CSCEEEEE
T ss_pred EEECCC-CCEEEEEcCCC---------CCcccccccccCCCCEEEEEe----CCCEEEEE
Confidence 348865 46677765421 122111112488999877766 46676655
No 48
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=51.41 E-value=33 Score=24.31 Aligned_cols=43 Identities=12% Similarity=0.194 Sum_probs=27.7
Q ss_pred EEEecCCcceeeEEEecCCCCCC--CceEecCceeeeeeeecCCcceEEEEEEEEceeeeEEe
Q 031694 54 DIHNQGTSTAYDVSLTDDSWPQD--KFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHG 114 (155)
Q Consensus 54 tIYNvG~s~A~dV~l~D~sfp~~--~F~~v~G~~s~~~~ri~pg~nvsH~~vv~p~~~G~f~~ 114 (155)
++.|.+. ..+|.+.++.+|+. .| .+.||+..+++| .+.|.|.+
T Consensus 32 ~f~n~d~--~H~v~~~~~~~p~~~~~~------------~~~~g~t~~~tF----~~~G~y~y 76 (122)
T 2ux6_A 32 TFIPTDK--GHNVETIKGMIPDGAEAF------------KSKINENYKVTF----TAPGVYGV 76 (122)
T ss_dssp EEEESSS--SCCCEECTTCSCTTCCCC------------BCCTTCCEEEEE----CSCEEEEE
T ss_pred EEEECCC--CcEEEEcccccCCCccee------------ecCCCCEEEEEe----CCCEEEEE
Confidence 3457765 58888877556653 23 235898888877 45676655
No 49
>3cu7_A Complement C5; Mg domain, inflammation, anaphylatoxin, cleavage of basic residues, complement alternate pathway, glycoprotein, immune response; HET: NAG; 3.10A {Homo sapiens} PDB: 3kls_A* 3km9_A* 4e0s_A* 3prx_A* 3pvm_A* 4a5w_A* 1xwe_A
Probab=49.85 E-value=16 Score=36.45 Aligned_cols=84 Identities=11% Similarity=0.046 Sum_probs=55.0
Q ss_pred eEEEEeeec-----ccccccCceeEEEEEEEEecCCcceeeEEEecCCCCCCCceEecCce---------eeeeeeecCC
Q 031694 30 FIVAHKKAS-----LKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNI---------SQSWERLDAG 95 (155)
Q Consensus 30 ~LlvsK~i~-----~~~~v~g~~~vtV~ytIYNvG~s~A~dV~l~D~sfp~~~F~~v~G~~---------s~~~~ri~pg 95 (155)
.+.+.|-+- ...++.| +.+.+..+|+|..+.+ .+|++.=. ..+.|.+..+.. ..+-=.|++|
T Consensus 816 ~~~v~kpf~v~~~LP~~v~~G-D~~~i~~~V~N~~~~~-~~v~v~l~--~~~~~~~~~~~~~~~~~~~~~~~~~v~v~a~ 891 (1676)
T 3cu7_A 816 KAKVFKDVFLEMNIPYSVVRG-EQIQLKGTVYNYRTSG-MQFCVKMS--AVEGICTSESPVIDHQGTKSSKCVRQKVEGS 891 (1676)
T ss_dssp EEEECCSEEEEEECCSCEETT-CCEEEEEEEEECSSSC-BCCCCEEC--CCTTEECSSCC----------CCCCCCBCTT
T ss_pred EEEEEeeEEEEccCCcEEEEC-cEEEEEEEEEcCCCCc-EEEEEEEe--cCCCeEEeccccccccccccceeEEEEECCC
Confidence 455555432 3456777 9999999999998753 44444421 234565554321 0122368999
Q ss_pred cceEEEEEEEEceeeeEEeecE
Q 031694 96 GILSHSFELDAKVKGMFHGSPA 117 (155)
Q Consensus 96 ~nvsH~~vv~p~~~G~f~~t~A 117 (155)
+..+..+.|+|.+.|..+++-.
T Consensus 892 ~~~~v~f~i~p~~~G~~~i~v~ 913 (1676)
T 3cu7_A 892 SSHLVTFTVLPLEIGLHNINFS 913 (1676)
T ss_dssp EEEECCEEEEECSSSCCCEEEE
T ss_pred CeEEEEEEEEEcccCcEEEEEE
Confidence 9999999999999888776543
No 50
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=49.45 E-value=11 Score=24.97 Aligned_cols=54 Identities=15% Similarity=0.163 Sum_probs=30.7
Q ss_pred EEEecCCcceeeEEEecCCCCCCCceEec-CceeeeeeeecCCcceEEEEEEEEceeeeEEe
Q 031694 54 DIHNQGTSTAYDVSLTDDSWPQDKFDVIS-GNISQSWERLDAGGILSHSFELDAKVKGMFHG 114 (155)
Q Consensus 54 tIYNvG~s~A~dV~l~D~sfp~~~F~~v~-G~~s~~~~ri~pg~nvsH~~vv~p~~~G~f~~ 114 (155)
++.|.+. ...+|.+.+..+|... +.-. +..... -.|+||++.+++|. +.|.|.|
T Consensus 28 ~~~n~~~-~~H~v~~~~~~~p~~~-~~~~~~~~~~~-~~~~~G~~~~~tf~----~~G~y~~ 82 (99)
T 1plc_A 28 VFKNNAG-FPHNIVFDEDSIPSGV-DASKISMSEED-LLNAKGETFEVALS----NKGEYSF 82 (99)
T ss_dssp EEEECSS-CCBCCEECTTSSCTTC-CHHHHCCCTTC-CBCSTTCEEEEECC----SCEEEEE
T ss_pred EEEECCC-CceEEEEeCCCCcccc-cccccccccCc-cccCCCCEEEEEEC----CCceEEE
Confidence 3478874 5789999877676431 1000 000000 25789998887663 6676654
No 51
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=48.12 E-value=40 Score=31.79 Aligned_cols=61 Identities=16% Similarity=0.312 Sum_probs=35.6
Q ss_pred eeEEEEEEEEecCCcce---eeEEEecCCCCCCCceEecCce---eeeeeeecCCcceEEEEEEEEc
Q 031694 47 ERISVSIDIHNQGTSTA---YDVSLTDDSWPQDKFDVISGNI---SQSWERLDAGGILSHSFELDAK 107 (155)
Q Consensus 47 ~~vtV~ytIYNvG~s~A---~dV~l~D~sfp~~~F~~v~G~~---s~~~~ri~pg~nvsH~~vv~p~ 107 (155)
...+++.++.|+|+.+. |.+++.-+.-+.-.+.+.-..+ +..-=.|+||++.+-+|++.+.
T Consensus 499 ~~~~~~~tv~N~g~~~~~~~y~~~v~~~~~~~~~~~v~p~~l~~~~~~~vtv~ag~~~~~~vt~~~~ 565 (926)
T 1xf1_A 499 DKFEVTVNVHNKSDKPQELYYQATVQTDKVDGKHFALAPKVLYETSWQKITIPANSSKQVTVPIDAS 565 (926)
T ss_dssp SEEEEEEEEEECSSSCEEEEEEEEEEEEEEETTEEEEEEEEEEECCCEEEEECTTEEEEEEEEEECH
T ss_pred ccEEEEEEEEEeCCCceeEEEEEEEEeccCCCceEEeccceeEeccCCeEEECCCCEEEEEEEEEcC
Confidence 46888999999998542 4444432111111222222211 1122368899999999999975
No 52
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=47.04 E-value=16 Score=24.02 Aligned_cols=62 Identities=19% Similarity=0.208 Sum_probs=33.7
Q ss_pred cccCceeEEEEEEEEecCCcceeeEEEecCCCCCCCceEecCceeeeeeeecCCcceEEEEEEEEceeeeEEe
Q 031694 42 LKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHG 114 (155)
Q Consensus 42 ~v~g~~~vtV~ytIYNvG~s~A~dV~l~D~sfp~~~F~~v~G~~s~~~~ri~pg~nvsH~~vv~p~~~G~f~~ 114 (155)
+..| +.+ ++.|.+. ...++.+.+..||.. ++--.+.....=-.|+||++.+++|. +.|.|.|
T Consensus 21 v~~G-~tV----~~~n~~~-~~H~~~~~~~~~p~g-~~~~~~~~~~~~~~~~~G~~~~~~f~----~~G~y~~ 82 (99)
T 1byp_A 21 IASG-EKI----TFKNNAG-FPHNDLFDKKEVPAG-VDVTKISMPEEDLLNAPGEEYSVTLT----EKGTYKF 82 (99)
T ss_dssp ECTT-EEE----EEEECSS-CCBCCEECTTSSCTT-CCHHHHSCCTTCCBCSTTCEEEEEEC----SCEEEEE
T ss_pred ECCC-CEE----EEEECCC-CcceEEEeCCCCccc-cccccccccccceeeCCCCEEEEEeC----CCcEEEE
Confidence 4456 543 3468874 568899887667642 21100000000025789998887663 6676544
No 53
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=47.01 E-value=27 Score=25.21 Aligned_cols=64 Identities=14% Similarity=0.210 Sum_probs=34.9
Q ss_pred EEEEEEEecCCcc----eeeEEEecCCCC------------CCCceEecCceee--eeeeecCCcceEEEEEEEE-ceee
Q 031694 50 SVSIDIHNQGTST----AYDVSLTDDSWP------------QDKFDVISGNISQ--SWERLDAGGILSHSFELDA-KVKG 110 (155)
Q Consensus 50 tV~ytIYNvG~s~----A~dV~l~D~sfp------------~~~F~~v~G~~s~--~~~ri~pg~nvsH~~vv~p-~~~G 110 (155)
+|++++-|.|.-+ -.++.|...+-+ ...| +..+.... .-..|.||++.+.++...- .+.|
T Consensus 28 ~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~-v~~~~~~~~~~t~~l~pGet~svtf~~~~~~~~G 106 (129)
T 1cuo_A 28 EFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNF-VTPGDKRVIAFTPIIGGGEKTSVKFKVSALSKDE 106 (129)
T ss_dssp EEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTT-SCTTCTTCSEECCCBCTTCEEEEEEEGGGCCTTS
T ss_pred EEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccc-cccccccceeeeeEECCCCEEEEEEeccccCCCc
Confidence 4567788999876 588888763210 0011 11112211 1235889998888775310 2556
Q ss_pred eEEe
Q 031694 111 MFHG 114 (155)
Q Consensus 111 ~f~~ 114 (155)
.|.|
T Consensus 107 ~Y~f 110 (129)
T 1cuo_A 107 AYTY 110 (129)
T ss_dssp CEEE
T ss_pred eEEE
Confidence 6654
No 54
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=46.80 E-value=1.1e+02 Score=24.65 Aligned_cols=17 Identities=12% Similarity=0.266 Sum_probs=13.0
Q ss_pred eeEEEEEEEEecCCcce
Q 031694 47 ERISVSIDIHNQGTSTA 63 (155)
Q Consensus 47 ~~vtV~ytIYNvG~s~A 63 (155)
.+=.++++|.|.|+.+.
T Consensus 42 ~~k~~sl~l~N~~~~P~ 58 (257)
T 3q48_A 42 SEREVTLRVSNTSGTPV 58 (257)
T ss_dssp TCSEEEEEEEECSSSCE
T ss_pred CCcEEEEEEEeCCCCeE
Confidence 44567889999998754
No 55
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=46.30 E-value=1.2e+02 Score=26.73 Aligned_cols=72 Identities=19% Similarity=0.284 Sum_probs=51.1
Q ss_pred EEEeeecccccccCceeEEEEEEEEecCCcceeeEEEecCCCCCC--------------------CceEecCceeeeeee
Q 031694 32 VAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQD--------------------KFDVISGNISQSWER 91 (155)
Q Consensus 32 lvsK~i~~~~~v~g~~~vtV~ytIYNvG~s~A~dV~l~D~sfp~~--------------------~F~~v~G~~s~~~~r 91 (155)
.-.-+++.+.+.+| ++++++=.+. +- .+||.. .-+.+.|.+..+-=+
T Consensus 45 wyD~~~S~~~~~vn-e~~tiTGk~~-----------~~-~~WP~~v~~p~~~fln~~~Pgp~~~r~~~~ing~p~~~s~~ 111 (419)
T 3rfr_A 45 WYDVQWSKTTVNVN-EEMILSGKVH-----------VF-SAWPQAVANPRVSFLNAGEPGPVLVRTAQFIGEQFAPRSVS 111 (419)
T ss_dssp EEEEECSCSEEETT-CEEEEEEEEE-----------EC-TTCCTTSCCTTSEEEEEECSSSSEEEEEEEETTEECSSCBC
T ss_pred EEEeeeccceeccC-CEEEEEEEEE-----------Ec-ccChhhcCCcceeEEecCCCCcceeehhhhhcCcCCcceEE
Confidence 44556777888999 8988874432 22 233321 123566776666668
Q ss_pred ecCCcceEEEEEEEEceeeeEEeec
Q 031694 92 LDAGGILSHSFELDAKVKGMFHGSP 116 (155)
Q Consensus 92 i~pg~nvsH~~vv~p~~~G~f~~t~ 116 (155)
|+.|......++++++..|.|+..+
T Consensus 112 l~~G~~Y~fki~lkaR~PG~~HVH~ 136 (419)
T 3rfr_A 112 LEIGKDYAFSINLRGRRAGRWHVHA 136 (419)
T ss_dssp CCTTCEEEEEEEEEECSCEEEEEEE
T ss_pred ecCCCeEeEEEEEecccCcccccce
Confidence 9999999999999999999999865
No 56
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=45.07 E-value=18 Score=26.52 Aligned_cols=64 Identities=9% Similarity=0.139 Sum_probs=35.8
Q ss_pred EEEEEEEecCCcc----eeeEEEecCC------------CCCCCceEecCceeee--eeeecCCcceEEEEEEEE-ceee
Q 031694 50 SVSIDIHNQGTST----AYDVSLTDDS------------WPQDKFDVISGNISQS--WERLDAGGILSHSFELDA-KVKG 110 (155)
Q Consensus 50 tV~ytIYNvG~s~----A~dV~l~D~s------------fp~~~F~~v~G~~s~~--~~ri~pg~nvsH~~vv~p-~~~G 110 (155)
+|++++-|.|.-+ -.|+.|.... .|...| +-.+...+. =..|.||++.+.++...- .+.|
T Consensus 28 ~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y-~~~~d~~via~t~~l~pGes~~vtf~~~~l~~~G 106 (125)
T 3fsa_A 28 QFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDY-LKPDDSRVIAHTKLIGSGEKDSVTFDVSKLKEGE 106 (125)
T ss_dssp EEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTT-SCTTCTTCCEECCCBCTTCEEEEEEEGGGC---C
T ss_pred EEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhcc-CCCCCccceeccceeCCCcEEEEEEeCcCcCCCc
Confidence 5668899999877 7888887421 111111 112332222 235899999888774321 1567
Q ss_pred eEEe
Q 031694 111 MFHG 114 (155)
Q Consensus 111 ~f~~ 114 (155)
.|.|
T Consensus 107 ~y~f 110 (125)
T 3fsa_A 107 QYMF 110 (125)
T ss_dssp CEEE
T ss_pred cEEE
Confidence 7665
No 57
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=44.97 E-value=32 Score=24.44 Aligned_cols=44 Identities=14% Similarity=0.163 Sum_probs=27.6
Q ss_pred EEEEecCCcceeeEEEecCCCCCC--CceEecCceeeeeeeecCCcceEEEEEEEEceeeeEEe
Q 031694 53 IDIHNQGTSTAYDVSLTDDSWPQD--KFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHG 114 (155)
Q Consensus 53 ytIYNvG~s~A~dV~l~D~sfp~~--~F~~v~G~~s~~~~ri~pg~nvsH~~vv~p~~~G~f~~ 114 (155)
++..|.+. ..+|.+.++.+|.. .| .+.||++.+++| .+.|.|.|
T Consensus 31 V~f~n~~~--~H~v~~~~~~~p~~~~~~------------~~~pG~t~~~tF----~~~G~y~y 76 (123)
T 1pmy_A 31 IKFLPTDK--GHNVETIKGMAPDGADYV------------KTTVGQEAVVKF----DKEGVYGF 76 (123)
T ss_dssp EEEECSSS--SCCCEECTTSSCTTCCCC------------BCCTTSCEEEEC----CSCEEEEE
T ss_pred EEEEECCC--CcEEEEecccCCCCccce------------ecCCCCEEEEEe----CCCeEEEE
Confidence 34566665 57888877666653 33 235899877776 35566544
No 58
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=44.71 E-value=20 Score=23.76 Aligned_cols=61 Identities=18% Similarity=0.266 Sum_probs=34.3
Q ss_pred cccCceeEEEEEEEEecCCcceeeEEEecCCCCCCCceEecCcee--eee--eeecCCcceEEEEEEEEceeeeEEe
Q 031694 42 LKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNIS--QSW--ERLDAGGILSHSFELDAKVKGMFHG 114 (155)
Q Consensus 42 ~v~g~~~vtV~ytIYNvG~s~A~dV~l~D~sfp~~~F~~v~G~~s--~~~--~ri~pg~nvsH~~vv~p~~~G~f~~ 114 (155)
+..| +.++ +.|.+. ...++.+.+..+|.+ .|.-+ ..| -.|.||++.+++|+ .|.+.|.|.|
T Consensus 24 v~~G-d~V~----~~n~~~-~~H~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~pG~~~~~~f~-~~~~~G~y~y 88 (106)
T 2gim_A 24 IKPG-DTVE----FLNNKV-PPHNVVFDAALNPAK-----SADLAKSLSHKQLLMSPGQSTSTTFP-ADAPAGEYTF 88 (106)
T ss_dssp ECTT-CEEE----EEECSS-SCCCBEECSSSSTTC-----CHHHHHHHCBCSCCCSTTCEEEEECC-TTCCSEEEEE
T ss_pred ECCC-CEEE----EEECCC-CCceEEEeCCCCccc-----ccccchhccccceeeCCCCEEEEEEe-cCCCCceEEE
Confidence 3456 5443 348874 458888887666642 22100 012 24889998776443 1267787655
No 59
>1bw3_A Barwin, basic barley SEED protein; lectin; NMR {Hordeum vulgare} SCOP: b.52.1.2 PDB: 1bw4_A
Probab=42.64 E-value=31 Score=25.48 Aligned_cols=49 Identities=16% Similarity=0.362 Sum_probs=30.3
Q ss_pred cccccCceeEEEEEEEEecCCcceeeEEEecC------CCC-CCCceEec--------Cceeeeeeeec
Q 031694 40 KRLKSGAERISVSIDIHNQGTSTAYDVSLTDD------SWP-QDKFDVIS--------GNISQSWERLD 93 (155)
Q Consensus 40 ~~~v~g~~~vtV~ytIYNvG~s~A~dV~l~D~------sfp-~~~F~~v~--------G~~s~~~~ri~ 93 (155)
+....| +-+. |.|.++..-..|.+.|- ..+ ++.|+-+. |.+.++|+.++
T Consensus 59 ~g~~CG-~cv~----Vtn~~nGksV~V~VvD~CP~ggLDLS~~~AF~~Ia~~g~G~~~G~i~V~w~~V~ 122 (125)
T 1bw3_A 59 GQAACG-KCLR----VTNPATGAQITARIVDQCANGGLDLDWDTVFTKIDTNGIGYQQGHLNVNYQFVD 122 (125)
T ss_dssp SGGGTT-CEEE----EEETTTTEEEEEEEEECCSSSSCCSCSSSSHHHHCSSCHHHHHSEEEEEEEEEC
T ss_pred CCcccC-CEEE----eEeCCCCCEEEEEEEEeCCCCCCCCCCHHHHHHHhccCCcccCcEEEEEEEEEe
Confidence 445567 5444 45666566777788773 233 56776654 44678887775
No 60
>1suj_A CONE arrestin; sensory transduction, signaling protein; 2.38A {Ambystoma tigrinum}
Probab=42.49 E-value=1.4e+02 Score=25.75 Aligned_cols=77 Identities=17% Similarity=0.260 Sum_probs=51.1
Q ss_pred EEEEeeecccccccCceeEEEEEEEEecCCcceeeEEEe--c--C--CCCCCCceEecCceeeeeeeecCCcceEEEEEE
Q 031694 31 IVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLT--D--D--SWPQDKFDVISGNISQSWERLDAGGILSHSFEL 104 (155)
Q Consensus 31 LlvsK~i~~~~~v~g~~~vtV~ytIYNvG~s~A~dV~l~--D--~--sfp~~~F~~v~G~~s~~~~ri~pg~nvsH~~vv 104 (155)
|.+.=++..+-++.| +.|.|++.|-|.-+.+...|++. - + -|....+.-+=- ...+-+-|+||++.+.++.|
T Consensus 194 l~l~vsLdK~~Y~pG-E~I~V~v~I~N~Ssk~Vk~Ikv~L~Q~~~v~l~s~~~~k~~Va-~~e~~e~V~pgst~~k~~~L 271 (392)
T 1suj_A 194 LHLEASLDKEIYYHG-EPINVNVKINNTTGKIVKKIKIIVEQVTDVVLFSLDKYVKTVC-AEETNDTVAANSTLSKTFSV 271 (392)
T ss_dssp EEEEEEESCSEEETT-CCEEEEEEEEECSSSEEEEEEEEEEEEEEECSSSCCEEEEEEE-EEECCCCBCTTEEEEEEEEE
T ss_pred EEEEEEeCCccccCC-CEEEEEEEEECCCCCcEeEEEEEEEEEEEEEEecCCcEEEEEE-EEecCCCcCCCCEEEEEEEE
Confidence 444445667778889 99999999999999988775542 2 1 133333321100 01123478999999999999
Q ss_pred EEcee
Q 031694 105 DAKVK 109 (155)
Q Consensus 105 ~p~~~ 109 (155)
+|...
T Consensus 272 ~P~l~ 276 (392)
T 1suj_A 272 TPMLA 276 (392)
T ss_dssp CCCGG
T ss_pred ecccc
Confidence 97766
No 61
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=42.16 E-value=43 Score=23.73 Aligned_cols=43 Identities=14% Similarity=0.134 Sum_probs=26.1
Q ss_pred EEEecCCcceeeEEEecCCCCCC--CceEecCceeeeeeeecCCcceEEEEEEEEceeeeEEe
Q 031694 54 DIHNQGTSTAYDVSLTDDSWPQD--KFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHG 114 (155)
Q Consensus 54 tIYNvG~s~A~dV~l~D~sfp~~--~F~~v~G~~s~~~~ri~pg~nvsH~~vv~p~~~G~f~~ 114 (155)
+..|.+. ..+|.+.++.+|.. .|. +.||++.+++| .+.|.|.|
T Consensus 32 ~f~~~~~--~H~v~~~~~~~p~~~~~~~------------~~pG~t~~~tF----~~~G~y~y 76 (123)
T 1paz_A 32 TFIPVDK--GHNVESIKDMIPEGAEKFK------------SKINENYVLTV----TQPGAYLV 76 (123)
T ss_dssp EEEESSS--SCCCEECTTCSCTTCCCCB------------CCTTCCEEEEC----CSCEEEEE
T ss_pred EEEECCC--CeEEEEecccCCCCcccee------------cCCCCEEEEEe----CCCEEEEE
Confidence 3456654 48888876656643 232 25898877766 35566544
No 62
>4a02_A EFCBM33A, CBM33, chitin binding protein; chitin degradation, chitin oxidation; 0.95A {Enterococcus faecalis} SCOP: b.1.18.0
Probab=40.61 E-value=1.2e+02 Score=23.12 Aligned_cols=64 Identities=16% Similarity=0.348 Sum_probs=46.7
Q ss_pred eEEEEEEEEecCCcceeeEEEecCCCCCC------CceEecCceeeeeeeecCCcceEEEEEEEEceeeeEEe
Q 031694 48 RISVSIDIHNQGTSTAYDVSLTDDSWPQD------KFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHG 114 (155)
Q Consensus 48 ~vtV~ytIYNvG~s~A~dV~l~D~sfp~~------~F~~v~G~~s~~~~ri~pg~nvsH~~vv~p~~~G~f~~ 114 (155)
.++++|...=.....=..+=|+.++|.+. +||++. ...=.-..|+...+|.+.|=..+.|++-+
T Consensus 75 ~~~f~w~~TA~H~t~~~~~YITK~gwdp~~pLtw~dle~~~---~~~~~~~~p~~~y~~~v~lP~~rsG~hVI 144 (166)
T 4a02_A 75 PLDITWNLTAQHRTASWDYYITKNGWNPNQPLDIKNFDKIA---SIDGKQEVPNKVVKQTINIPTDRKGYHVI 144 (166)
T ss_dssp EEEEEEEESSCCCEEEEEEEEECTTCCTTSCCCGGGEEEEE---EEEEEEECCCSEEEEEEEECTTCCEEEEE
T ss_pred ceEEEEeeecccCCCeEEEEEcCCCCCCCCCccHHHCeeee---eecCCCcCCCCeEEEEEEeCCCCccCEEE
Confidence 58888988888877788999999999873 577766 22222246778899998863347888744
No 63
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=40.20 E-value=1.2e+02 Score=26.12 Aligned_cols=67 Identities=19% Similarity=0.237 Sum_probs=42.5
Q ss_pred ccccCceeEEEEEEEEecCCcceeeEEEecCCCCCCCceEecCceeeeeeeecCCcceEEEEEEEEc---eeeeEEee
Q 031694 41 RLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAK---VKGMFHGS 115 (155)
Q Consensus 41 ~~v~g~~~vtV~ytIYNvG~s~A~dV~l~D~sfp~~~F~~v~G~~s~~~~ri~pg~nvsH~~vv~p~---~~G~f~~t 115 (155)
.+..| +..+|+.+|-|.+..+..+.+++ - .-+..|+.-. ....++||++.+-.+.|++. ..|.|.++
T Consensus 368 ~~~~g-~~~~~~~~vtn~~~~~~~~~~~~-~-~~~~~~~~~~-----~~~~~~~g~~~t~~~~vt~~~~~~~g~y~l~ 437 (601)
T 1w8o_A 368 ALEPG-QQVTVPVAVTNQSGIAVPKPSLQ-L-DASPDWQVQG-----SVEPLMPGRQAKGQVTITVPAGTTPGRYRVG 437 (601)
T ss_dssp EECTT-CEEEEEEEEECCSSSCBSSCEEE-E-ECCTTSEEEE-----EECCBCTTCEEEEEEEEECCTTCCCEEEEEE
T ss_pred eecCC-ceeEEEEEEECCCceeccCceEE-E-ecCCCcEEec-----cccccCCCCceEEEEEEecCCCCCCCcEEee
Confidence 34567 79999999999887655444333 1 1133443322 34678899998887777754 45666553
No 64
>3rgh_A Filamin-A; cell adhesion, cytoskeleton-complex, disease mutation, immun like, cytoskeleton, actin-binding, cell junction, shape; HET: CME; 2.44A {Homo sapiens} SCOP: b.1.18.0
Probab=40.19 E-value=83 Score=21.18 Aligned_cols=66 Identities=15% Similarity=0.229 Sum_probs=44.2
Q ss_pred ccccCceeEEEEEEEEecCCcceeeEEEecCCCCCCCceEecCceeeeeeeecCCcceEEEEEEEEceeeeEEeecEEEE
Q 031694 41 RLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALIT 120 (155)
Q Consensus 41 ~~v~g~~~vtV~ytIYNvG~s~A~dV~l~D~sfp~~~F~~v~G~~s~~~~ri~pg~nvsH~~vv~p~~~G~f~~t~A~Vt 120 (155)
...+| +...++++-.+.|.. ...|++.+++ |. .. .-.+....+=++.+.-+|...|.|.+ .|+
T Consensus 20 ~~~vg-~~~~F~V~~~~aG~~-~l~v~i~~~~----------g~-~~-~~~v~d~~dGty~V~Y~p~~~G~y~i---~V~ 82 (100)
T 3rgh_A 20 RATAG-EVGQFQVDCSSAGSA-ELTIEICSEA----------GL-PA-EVYIQDHGDGTHTITYIPLCPGAYTV---TIK 82 (100)
T ss_dssp EEETT-SCEEEEEECTTSCSC-CEEEEEECTT----------SC-BC-EEEEEECSSSEEEEEEECCSSEEEEE---EEE
T ss_pred CeEcC-CcEEEEEEECCCCCc-eEEEEEECCC----------CC-Ee-EEEEEeCCCCEEEEEEEeCCCeeEEE---EEE
Confidence 35677 788888888888774 5788887642 22 11 12344455567888888888898887 577
Q ss_pred EEc
Q 031694 121 FRI 123 (155)
Q Consensus 121 Y~~ 123 (155)
|..
T Consensus 83 ~~g 85 (100)
T 3rgh_A 83 YGG 85 (100)
T ss_dssp ETT
T ss_pred ECC
Confidence 753
No 65
>1g4m_A Beta-arrestin1; sensory transduction, alternative splicing, signaling protein; 1.90A {Bos taurus} SCOP: b.1.18.11 b.1.18.11 PDB: 1g4r_A 3gd1_C 1jsy_A 1zsh_A* 2wtr_A 2wtr_B 3gc3_A 3p2d_A
Probab=36.42 E-value=1.3e+02 Score=25.73 Aligned_cols=74 Identities=11% Similarity=0.163 Sum_probs=50.5
Q ss_pred EEEEeeecccccccCceeEEEEEEEEecCCcceeeEE--Eec----CCCCCCCceEecCceeee---eeeecCCcceEEE
Q 031694 31 IVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVS--LTD----DSWPQDKFDVISGNISQS---WERLDAGGILSHS 101 (155)
Q Consensus 31 LlvsK~i~~~~~v~g~~~vtV~ytIYNvG~s~A~dV~--l~D----~sfp~~~F~~v~G~~s~~---~~ri~pg~nvsH~ 101 (155)
|-+.=++..+-++.| +.+.|++.|-|.-+.+...|+ |.- -.|....+. ..-++ =+.|+||++.+++
T Consensus 197 l~l~~sldk~~Y~pG-E~I~v~v~I~N~S~k~Vk~Ikv~L~Q~~~~~~~s~~~~k----~~Va~~e~~~~V~~gs~~~~~ 271 (393)
T 1g4m_A 197 LHLEASLDKEIYYHG-EPISVNVHVTNNTNKTVKKIKISVRQYADICLFNTAQYK----CPVAMEEADDTVAPSSTFCKV 271 (393)
T ss_dssp EEEEEEESCSEEETT-CCEEEEEEEEECSSCCEEEEEEEEEEEEEECSSBCEEEE----EEEEEEEECCCBCTTEEEEEE
T ss_pred EEEEEEECCceEcCC-CEEEEEEEEEcCCCCEEeEEEEEEEEEEEEEEecCCceE----EEEEEEecCCcCCCCCEEeeE
Confidence 555556777888899 999999999999877766654 432 123333332 11122 2369999999999
Q ss_pred EEEEEcee
Q 031694 102 FELDAKVK 109 (155)
Q Consensus 102 ~vv~p~~~ 109 (155)
+.|.|...
T Consensus 272 ~~L~P~l~ 279 (393)
T 1g4m_A 272 YTLTPFLA 279 (393)
T ss_dssp EEECCCGG
T ss_pred EEEcCCCC
Confidence 99987654
No 66
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=35.58 E-value=78 Score=29.87 Aligned_cols=84 Identities=14% Similarity=0.233 Sum_probs=53.8
Q ss_pred eeEEEEEEEEecC-CcceeeEEE---ecC--CCCCCCceEecCceeeeeeeecCCcceEEEEEEE-EceeeeEEeecEEE
Q 031694 47 ERISVSIDIHNQG-TSTAYDVSL---TDD--SWPQDKFDVISGNISQSWERLDAGGILSHSFELD-AKVKGMFHGSPALI 119 (155)
Q Consensus 47 ~~vtV~ytIYNvG-~s~A~dV~l---~D~--sfp~~~F~~v~G~~s~~~~ri~pg~nvsH~~vv~-p~~~G~f~~t~A~V 119 (155)
..++|+++|-|.| +-+..+|.- .|. +-....= -..|- .|. .|+||++.+-++.|. ++...+|+-.. -
T Consensus 735 ~~~~v~v~V~NtG~~~~G~eVvQlYv~~~~~~~~~P~k-~L~gF--~kv-~L~pGes~~V~~~l~~~~~l~~~d~~~--~ 808 (845)
T 3abz_A 735 DKIAISVDVKNTGDKFAGSEVVQVYFSALNSKVSRPVK-ELKGF--EKV-HLEPGEKKTVNIDLELKDAISYFNEEL--G 808 (845)
T ss_dssp SEEEEEEEEEECCSSCCEEEEEEEEEEESSCSSCCCSC-EEEEE--EEE-EECTTCEEEEEEEEEHHHHHCEEETTT--T
T ss_pred CeEEEEEEEEECCcCCCcceeeeeeEeCCCCCcchhhh-eeccc--eeE-EECCCCEEEEEEEeCChHHeeEEecCC--C
Confidence 5899999999999 777766532 332 1111111 12222 123 499999999999999 88888887642 2
Q ss_pred EEEcCCcc-ceeEEeecC
Q 031694 120 TFRIPTKA-ALQEAYSTP 136 (155)
Q Consensus 120 tY~~se~~-~~q~a~Ss~ 136 (155)
.|..+.+. .+.+|.||.
T Consensus 809 ~~~~e~G~y~v~vG~ss~ 826 (845)
T 3abz_A 809 KWHVEAGEYLVSVGTSSD 826 (845)
T ss_dssp EEEECSEEEEEEEESSTT
T ss_pred eEEEcCCEEEEEEECCCC
Confidence 35555553 356777774
No 67
>1c9o_A CSPB, cold-shock protein; beta barrel, homodimer, transcription; 1.17A {Bacillus caldolyticus} SCOP: b.40.4.5 PDB: 2hax_A 1hz9_A 1hzb_A 1i5f_A 1hza_A 1hzc_A 3pf4_A 1csq_A 1nmf_A 1nmg_A 1csp_A 2f52_A 2es2_A 3pf5_A 2i5m_X 2i5l_X
Probab=34.20 E-value=45 Score=21.18 Aligned_cols=41 Identities=24% Similarity=0.239 Sum_probs=30.1
Q ss_pred CCCceEEEEeeeccc----ccccCceeEEEEEEEEecCCcceeeEEE
Q 031694 26 SDVPFIVAHKKASLK----RLKSGAERISVSIDIHNQGTSTAYDVSL 68 (155)
Q Consensus 26 ~~~a~LlvsK~i~~~----~~v~g~~~vtV~ytIYNvG~s~A~dV~l 68 (155)
+++..+.+|.+-+.. .|.+| +.++++..--..| -.|.+|.+
T Consensus 21 ~~g~dvFvH~s~i~~~g~~~l~~G-~~V~f~~~~~~kG-~~A~~V~~ 65 (66)
T 1c9o_A 21 EGGSDVFVHFTAIQGEGFKTLEEG-QEVSFEIVQGNRG-PQAANVVK 65 (66)
T ss_dssp TTEEEEEEEGGGBCSSSCCCCCTT-CEEEEEEEEETTE-EEEEEEEE
T ss_pred CCCccEEEEHHHccccCCCCCCCC-CEEEEEEEECCCC-cEeEEEEe
Confidence 445789999988764 48888 8888777666667 46778875
No 68
>1g6p_A Cold shock protein TMCSP; greek-KEY, beta barrel, OB-fold, structural genomics; NMR {Thermotoga maritima} SCOP: b.40.4.5
Probab=33.96 E-value=19 Score=23.10 Aligned_cols=43 Identities=21% Similarity=0.249 Sum_probs=29.9
Q ss_pred CCCceEEEEeeeccc----ccccCceeEEEEEEEEecCCcceeeEEEec
Q 031694 26 SDVPFIVAHKKASLK----RLKSGAERISVSIDIHNQGTSTAYDVSLTD 70 (155)
Q Consensus 26 ~~~a~LlvsK~i~~~----~~v~g~~~vtV~ytIYNvG~s~A~dV~l~D 70 (155)
+++..+.+|.+-+.. .|.+| +.++++..--..| -.|.+|.+.|
T Consensus 20 ~~g~dvFvH~s~i~~~g~~~l~~G-~~V~f~~~~~~~G-~~A~~V~~~~ 66 (66)
T 1g6p_A 20 DEGGDVFVHWSAIEMEGFKTLKEG-QVVEFEIQEGKKG-PQAAHVKVVE 66 (66)
T ss_dssp TTSCBCBBCSSSSCCSSCCCCCSS-SEEEEEEECSSSC-CEEEEEEEEC
T ss_pred CCCceEEEEhHHccccCCCCCCCC-CEEEEEEEECCCC-CEEEEEEECC
Confidence 345778888877653 57888 7877666555556 5788888764
No 69
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=33.53 E-value=2.1e+02 Score=23.79 Aligned_cols=76 Identities=11% Similarity=0.118 Sum_probs=48.9
Q ss_pred CCCceEEEEeeecc-cccccCceeEEEEEEEEecCCcceeeEEEec----CCCCCCCceEecCceeeeeeeecCCcceEE
Q 031694 26 SDVPFIVAHKKASL-KRLKSGAERISVSIDIHNQGTSTAYDVSLTD----DSWPQDKFDVISGNISQSWERLDAGGILSH 100 (155)
Q Consensus 26 ~~~a~LlvsK~i~~-~~~v~g~~~vtV~ytIYNvG~s~A~dV~l~D----~sfp~~~F~~v~G~~s~~~~ri~pg~nvsH 100 (155)
...|.+-++++... ..+..+ ...+-+++|.|.|.-+| ..++.. ...++.=+.+ +-.-..|+||++.+-
T Consensus 25 ~~~P~v~v~~~~idFg~v~~~-~~~~~~l~i~N~g~~pa-~f~f~~~~~~~~~~~~wl~v-----~p~~g~l~Pge~~~i 97 (366)
T 3qis_A 25 DFLPSLELSRREFVFENVKFR-QLQKEKFQISNNGQVPC-HFSFIPKLNDSQYCKPWLRA-----EPFEGYLEPNETVDI 97 (366)
T ss_dssp ---CCEEESCSEEEEEEECBT-CCEEEEEEEEECSSSCE-EEEEECCTTCSSSSCTTEEE-----ESCEEEECTTCEEEE
T ss_pred ccCCeEEEecCeEEeeeeeeC-CeEEEEEEEEecCCceE-EEEEEeCCCCCCCCCCcEEE-----eCCccEECCCCEEEE
Confidence 34577777775442 346667 88999999999999988 455542 1222222333 223468999999888
Q ss_pred EEEEEEce
Q 031694 101 SFELDAKV 108 (155)
Q Consensus 101 ~~vv~p~~ 108 (155)
.+.+....
T Consensus 98 ~l~~~v~~ 105 (366)
T 3qis_A 98 SLDVYVSK 105 (366)
T ss_dssp EEEECBCT
T ss_pred EEEEEECH
Confidence 88887554
No 70
>2ytx_A Cold shock domain-containing protein E1; cell-free protein synthesis, beta-barrel, translational REGU RNA chaperone, RNA/DNA binding, QB fold; NMR {Homo sapiens}
Probab=33.31 E-value=60 Score=22.39 Aligned_cols=54 Identities=28% Similarity=0.327 Sum_probs=35.5
Q ss_pred CceEEEEeeeccc---ccccCceeEEEEEEEEecCCcceeeEEEecCCCCCCCceEecCce
Q 031694 28 VPFIVAHKKASLK---RLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNI 85 (155)
Q Consensus 28 ~a~LlvsK~i~~~---~~v~g~~~vtV~ytIYNvG~s~A~dV~l~D~sfp~~~F~~v~G~~ 85 (155)
+..+++|-+-+.. .|.+| +.+++... -..|.-.|.+|.+.+. +.-.||-+++-+
T Consensus 39 ~~DvFvH~s~i~~~~~~L~~G-~~V~F~v~-~~~~g~~A~~V~~~~~--~~~~~e~~~~~~ 95 (97)
T 2ytx_A 39 VKEIFFHYSEFKGDLETLQPG-DDVEFTIK-DRNGKEVATDVRLLPQ--GTVIFEDISGPS 95 (97)
T ss_dssp CCCEEEETTTCCSCTTSCCSC-CEEEEEEC-CCSSSCBEEEEEECCC--SSCCCCSCCSCC
T ss_pred CceEEEEehHhccccCCCCCC-CEEEEEEE-cCCCCcEEEEEEECCC--CccceeeccCCC
Confidence 4779999887754 58888 77665552 2233347999999864 455566666543
No 71
>3cam_A Cold-shock domain family protein; cold shock protein, chain SWAP, STRU genomics, oxford protein production facility, OPPF, gene RE; 2.60A {Neisseria meningitidis MC58}
Probab=32.91 E-value=68 Score=20.48 Aligned_cols=40 Identities=28% Similarity=0.332 Sum_probs=30.7
Q ss_pred CCceEEEEeeecc----cccccCceeEEEEEEEEecCCcceeeEEE
Q 031694 27 DVPFIVAHKKASL----KRLKSGAERISVSIDIHNQGTSTAYDVSL 68 (155)
Q Consensus 27 ~~a~LlvsK~i~~----~~~v~g~~~vtV~ytIYNvG~s~A~dV~l 68 (155)
.+..+.+|.+-+. +.|.+| +.++++..--..|- .|.+|.+
T Consensus 23 gg~dvFvH~s~i~~~g~~~l~~G-~~V~f~~~~~~kG~-~A~~V~~ 66 (67)
T 3cam_A 23 GGEDLFAHFSAINMEGFKTLKEG-QRVSFDVTTGPKGK-QAANIQA 66 (67)
T ss_dssp SCCCEEEEGGGBCGGGGSSCCTT-CEEEEEEEEETTEE-EEEEEEE
T ss_pred CCccEEEEHHHccccCCCCCCCC-CEEEEEEEECCCCc-cceEEEe
Confidence 3578999998875 468888 88888777666775 6778875
No 72
>2d7p_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10 PDB: 2eeb_A
Probab=32.66 E-value=1.2e+02 Score=20.94 Aligned_cols=82 Identities=13% Similarity=0.114 Sum_probs=55.8
Q ss_pred ccCCCCceEEEEeeecccccccCceeEEEEEEEEecCCcceeeEEEecCCCCCCCceEecCc-eeeeeeeecCCcceEEE
Q 031694 23 FASSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGN-ISQSWERLDAGGILSHS 101 (155)
Q Consensus 23 ~~~~~~a~LlvsK~i~~~~~v~g~~~vtV~ytIYNvG~s~A~dV~l~D~sfp~~~F~~v~G~-~s~~~~ri~pg~nvsH~ 101 (155)
+...|..++.+. -+.+....+| +...++++..+. .-..+|++.+++ |. ... .+....+-++.
T Consensus 6 ~~~~Daskv~~~-g~~~~~~~vg-~~~~F~V~~~~a--~g~l~v~V~~P~----------g~~~~~---~v~d~~~gty~ 68 (112)
T 2d7p_A 6 SGSDDARRLTVT-SLQETGLKVN-QPASFAVQLNGA--RGVIDARVHTPS----------GAVEEC---YVSELDSDKHT 68 (112)
T ss_dssp CCSCGGGGCEEC-SSCSBCCCTT-CCEEEEEECTTC--CSCEEEEEECSS----------SCBCCC---EECSCBTTEEE
T ss_pred cCCCCcceeEEe-CCCcCCcccC-CcEEEEEEeCCC--CCCEEEEEECCC----------CCeeee---EEEeCCCCeEE
Confidence 345566666665 3556778888 899988888776 246777887642 22 122 34445666888
Q ss_pred EEEEEceeeeEEeecEEEEEEcC
Q 031694 102 FELDAKVKGMFHGSPALITFRIP 124 (155)
Q Consensus 102 ~vv~p~~~G~f~~t~A~VtY~~s 124 (155)
+.-+|+..|.|.+ .|+|...
T Consensus 69 v~ytP~~~G~h~v---~V~~~g~ 88 (112)
T 2d7p_A 69 IRFIPHENGVHSI---DVKFNGA 88 (112)
T ss_dssp EEECCSSCEEEEE---EEEESSC
T ss_pred EEEEcCCCEeEEE---EEEECCe
Confidence 8889999999998 6777653
No 73
>1z9l_A Vesicle-associated membrane protein-associated protein A; VAP-A, cytoplasmic domain, protein binding; HET: MSE; 1.70A {Rattus norvegicus} PDB: 1z9o_A 2rr3_A 3ikk_A
Probab=32.58 E-value=1e+02 Score=21.66 Aligned_cols=52 Identities=15% Similarity=0.350 Sum_probs=40.4
Q ss_pred eeEEEEEEEEecCCc-ceeeEEEecCCCCCCCceEecCceeeeeeeecCCcceEEEEEEEEc
Q 031694 47 ERISVSIDIHNQGTS-TAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAK 107 (155)
Q Consensus 47 ~~vtV~ytIYNvG~s-~A~dV~l~D~sfp~~~F~~v~G~~s~~~~ri~pg~nvsH~~vv~p~ 107 (155)
+..+-..+|+|..+. -|+.|+-+.+ +.| .| .-....|+||+++.-.+.+.|.
T Consensus 27 ~~~~~~l~L~N~s~~~vaFKVKTT~p----~~y-~V----rP~~G~i~P~~s~~v~V~~~~~ 79 (128)
T 1z9l_A 27 DVVTTNLKLQNPSDRKVCFKVKTTAP----RRY-CV----RPNSGVIDPGSIVTVSVMLQPF 79 (128)
T ss_dssp SCEEEEEEEECCSSSCEEEEEEESCG----GGE-EE----ESCEEEECTTCEEEEEEEECCC
T ss_pred ceEEEEEEEECCCCCeEEEEEECCCC----Cce-EE----eCCCcEECCCCeEEEEEEECcC
Confidence 678899999999887 6788887753 334 22 3456899999999999998874
No 74
>1wfq_A UNR protein; beta-barrel, translational regulation, RNA chaperone, RNA/DN binding, QB fold, greek-KEY topology, structur genomics; NMR {Homo sapiens} SCOP: b.40.4.5
Probab=31.73 E-value=46 Score=22.70 Aligned_cols=43 Identities=14% Similarity=0.179 Sum_probs=31.0
Q ss_pred CceEEEEeeeccc---ccccCceeEEEEEEEEec-CCcceeeEEEecC
Q 031694 28 VPFIVAHKKASLK---RLKSGAERISVSIDIHNQ-GTSTAYDVSLTDD 71 (155)
Q Consensus 28 ~a~LlvsK~i~~~---~~v~g~~~vtV~ytIYNv-G~s~A~dV~l~D~ 71 (155)
+..++||.+-+.. .|.+| +.++++..--.. |.-.|.+|.+.+.
T Consensus 39 g~DVFvH~s~i~~~~~~L~~G-~~V~F~v~~~~k~Gk~~A~~V~~~~~ 85 (89)
T 1wfq_A 39 QARLFFHCSQYNGNLQDLKVG-DDVEFEVSSDRRTGKPIAVKLVKISG 85 (89)
T ss_dssp TEEEEEETTTCSSCTTTCCTT-CCEEEEEEECSSSCCEEEEEEEESSC
T ss_pred CccEEEEhHHhhCccCCCCCC-CEEEEEEEECCCCCCcEEEEEEECCc
Confidence 4789999887764 68888 777765554444 4357999999864
No 75
>2k5n_A Putative cold-shock protein; GFT protein structure, PSI, nesgc, OB fold, cold shock structural genomics; NMR {Pectobacterium atrosepticum}
Probab=31.55 E-value=73 Score=20.90 Aligned_cols=45 Identities=16% Similarity=0.137 Sum_probs=32.2
Q ss_pred CCCceEEEEeeeccc--ccccCceeEEEEEEEEecCCcceeeEEEecCC
Q 031694 26 SDVPFIVAHKKASLK--RLKSGAERISVSIDIHNQGTSTAYDVSLTDDS 72 (155)
Q Consensus 26 ~~~a~LlvsK~i~~~--~~v~g~~~vtV~ytIYNvG~s~A~dV~l~D~s 72 (155)
+++...++|.+-+.. .|.+| +.++++..--..| -.|.+|.+.|.+
T Consensus 22 ~dg~~dFvH~s~i~~~g~l~~G-~~V~F~~~~g~kG-~~A~~V~~~~~~ 68 (74)
T 2k5n_A 22 ENGDNRYFHVIKVANPDLIKKD-AAVTFEPTTNNKG-LSAYAVKVVPLE 68 (74)
T ss_dssp SSSCEEEEEGGGBSSGGGCCTT-CEEEEEEEECSSS-EEEEEEEECCSS
T ss_pred CCCCceEEEHhHcccCCCCCCC-CEEEEEEEeCCCC-ceeEEEEeCCCc
Confidence 344334888877665 68888 8888777655566 578999998753
No 76
>2q2e_B Type 2 DNA topoisomerase 6 subunit B; DNA-binding, SPO11, ATPase; 4.00A {Methanosarcina mazei}
Probab=31.49 E-value=41 Score=30.75 Aligned_cols=56 Identities=23% Similarity=0.468 Sum_probs=33.0
Q ss_pred eeEEEEEEEEecCCcceeeEEEecCCCCCC--------CceEecCceeeeee-eecCCcceEEEEEE
Q 031694 47 ERISVSIDIHNQGTSTAYDVSLTDDSWPQD--------KFDVISGNISQSWE-RLDAGGILSHSFEL 104 (155)
Q Consensus 47 ~~vtV~ytIYNvG~s~A~dV~l~D~sfp~~--------~F~~v~G~~s~~~~-ri~pg~nvsH~~vv 104 (155)
..+.|++.|+|.++ .+.+++|.| .+|.+ .|-=..|.-...|+ .|+||+...-+|.+
T Consensus 524 ~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (621)
T 2q2e_B 524 GTVDVAIKVKNFGT-SAYSFRVHE-MLPCKVSGAKPEPKVVTMGNDYDYVWDISASAGSSKVLSYKI 588 (621)
T ss_dssp CCEEEEEEECC-----CCCEEECC-EESCCC---CCCCCEEECSSSEEECEEECCCTTCEEEECCCC
T ss_pred CceEEEEEEEecCC-cccceEEEE-ecCCCccccCCCCeEEecCCceEEEEEEEeCCCCeEEEEEEe
Confidence 57789999999998 556899987 24433 23334555566776 46667665444443
No 77
>2kcm_A Cold shock domain family protein; nucleic acid binding protein, beta barrel, structural genomi 2, protein structure initiative; NMR {Shewanella oneidensis}
Probab=31.01 E-value=18 Score=23.99 Aligned_cols=46 Identities=20% Similarity=0.172 Sum_probs=32.8
Q ss_pred CCCCceEEEEeeecc-----cccccCceeEEEEEEEEecCCcceeeEEEecCC
Q 031694 25 SSDVPFIVAHKKASL-----KRLKSGAERISVSIDIHNQGTSTAYDVSLTDDS 72 (155)
Q Consensus 25 ~~~~a~LlvsK~i~~-----~~~v~g~~~vtV~ytIYNvG~s~A~dV~l~D~s 72 (155)
.+++..+++|.+-+. +.|.+| +.++++..--..|- .|.+|.+.|..
T Consensus 19 ~~dG~DvFvH~s~i~~~~g~~~l~~G-~~V~F~~~~g~kG~-~A~~V~~~~~~ 69 (74)
T 2kcm_A 19 GDDGESYFLHFSELLDKKDEGKLVKG-SMVHFDPTPTPKGL-AAKAISLPLEH 69 (74)
T ss_dssp ETTSCEECCCGGGSSCSGGGTTCCTT-SEEEEEEECTTTSC-EEEEEECCSCS
T ss_pred cCCCceEEEEhhhcccCCCCCCCCCC-CEEEEEEEECCCCc-eeEEEEEcCcc
Confidence 345578999988776 568888 78776665444553 78899988753
No 78
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=30.80 E-value=1.8e+02 Score=22.15 Aligned_cols=68 Identities=18% Similarity=0.135 Sum_probs=45.1
Q ss_pred ecccccccCceeEEEEEEEEecCCcceeeEEEecCCCCCCCceEecCceeeeeeeecCCcceEEEEEEEEcee---eeEE
Q 031694 37 ASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVK---GMFH 113 (155)
Q Consensus 37 i~~~~~v~g~~~vtV~ytIYNvG~s~A~dV~l~D~sfp~~~F~~v~G~~s~~~~ri~pg~nvsH~~vv~p~~~---G~f~ 113 (155)
+.=..+.+| ++.+.++++.|.|+.+- .+++. .-| ..|.+ +..=+.|+||+.-.-.+..-+++. |.+.
T Consensus 10 idFg~v~~g-~~~~~~~~i~N~g~~pl-~i~~~--~~p-~~~~~-----~~~~~~I~PG~~g~I~vt~~~~~~~~~G~~~ 79 (220)
T 2qsv_A 10 LLFPISMPE-DEGVVRLVVNNTDESDL-QVAVV--SLP-SFVSL-----DDRAFRLQAREPRELNLSLAVPRNMPPGMKD 79 (220)
T ss_dssp EECCSBCTT-CCCEEEEEEEECSSSCE-EEEEE--ECC-TTEEC-----SCCEEEECSSSCEEEEEEECCCTTCCSEEEE
T ss_pred eEcccccCC-CcceEEEEEEeCCCCce-EEEec--cCC-CceEe-----eeCcceeCCCCceEEEEEEcchhcccCCcee
Confidence 333455667 88899999999999654 44433 112 22221 134478999999999999988875 6554
Q ss_pred e
Q 031694 114 G 114 (155)
Q Consensus 114 ~ 114 (155)
-
T Consensus 80 ~ 80 (220)
T 2qsv_A 80 E 80 (220)
T ss_dssp E
T ss_pred e
Confidence 4
No 79
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=29.90 E-value=2.7e+02 Score=24.69 Aligned_cols=69 Identities=9% Similarity=0.138 Sum_probs=43.3
Q ss_pred eeEEEEEEEEecCCc-ceeeEEEecCCCCCCCceEecCceeeeeeeecCCcceEEEEEEEEceeeeEEeecEEEEEEc
Q 031694 47 ERISVSIDIHNQGTS-TAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITFRI 123 (155)
Q Consensus 47 ~~vtV~ytIYNvG~s-~A~dV~l~D~sfp~~~F~~v~G~~s~~~~ri~pg~nvsH~~vv~p~~~G~f~~t~A~VtY~~ 123 (155)
...+++-++.|+|.. .-|.+++.- +...++.---....+ =..|+..+.+++++.+..|.|.|. .+++.+
T Consensus 537 ~~~t~~rtvtnvg~~~~ty~~~v~~----p~gv~v~V~P~~l~f--~~~~~~~~~~vt~~~~~~~~~~~g--~l~w~d 606 (621)
T 3vta_A 537 FNQYFNRTLTSVAPQASTYRAMISA----PQGLTISVNPNVLSF--NGLGDRKSFTLTVRGSIKGFVVSA--SLVWSD 606 (621)
T ss_dssp EEEEEEEEEEECSSSCEEEEEEEEC----CSSEEEEEESSEEEE--CSTTCEEEEEEEEEECCCSSEEEE--EEEEEC
T ss_pred eEEEEEEEEEccCCCCeEEEEEEEC----CCCcEEEEecCEEEE--cCCCcEEEEEEEEEecCCCceEEE--EEEEEc
Confidence 467788899999987 456777762 222222110001111 156888899999998888888775 456654
No 80
>2d7m_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=29.68 E-value=1.3e+02 Score=20.46 Aligned_cols=63 Identities=14% Similarity=0.219 Sum_probs=43.8
Q ss_pred cCceeEEEEEEEEecCCcceeeEEEecCCCCCCCceEecCceeeeeeeecCCcceEEEEEEEEceeeeEEeecEEEEEEc
Q 031694 44 SGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITFRI 123 (155)
Q Consensus 44 ~g~~~vtV~ytIYNvG~s~A~dV~l~D~sfp~~~F~~v~G~~s~~~~ri~pg~nvsH~~vv~p~~~G~f~~t~A~VtY~~ 123 (155)
.| +...++++-.+.|. ....|++.+.. |. .. +-++.-..+=++.+.-+|...|.|.+ .|+|..
T Consensus 28 ~~-~~~~F~V~~~daG~-~~l~V~v~~p~----------g~-~~-~~~v~d~~dGty~v~Y~p~~~G~y~i---~V~~~g 90 (115)
T 2d7m_A 28 AS-LPVEFTIDARDAGE-GLLTVQILDPE----------GK-PK-KANIRDNGDGTYTVSYLPDMSGRYTI---TIKYGG 90 (115)
T ss_dssp SS-SCEEEEEEESSSCS-SCEEEEEECTT----------SC-BC-CEEEEECSSSCEEEEECCCSCEEEEE---EEEESS
T ss_pred cC-CcEEEEEEECCCCC-CEEEEEEECCC----------CC-ee-eeEEEECCCCEEEEEEEeCCCceEEE---EEEECC
Confidence 56 78899999999987 45788888642 22 11 11233334557888888999999988 788864
No 81
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=29.33 E-value=1.8e+02 Score=21.79 Aligned_cols=62 Identities=11% Similarity=0.135 Sum_probs=33.6
Q ss_pred cCceeEEEEEEEEecCCcceeeEEEecCCCCCCCceEe-cCceeeeeeeecCCcceEEEEEEEEce-eeeEEe
Q 031694 44 SGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVI-SGNISQSWERLDAGGILSHSFELDAKV-KGMFHG 114 (155)
Q Consensus 44 ~g~~~vtV~ytIYNvG~s~A~dV~l~D~sfp~~~F~~v-~G~~s~~~~ri~pg~nvsH~~vv~p~~-~G~f~~ 114 (155)
.| ..++|.-+.- .+..-..|++..|+= .-.-. .+.-+..|..+++| +|++.+++.- .|.-.-
T Consensus 15 ~g-~~vtv~~~As--~d~~V~~Ve~~~dg~---~v~~~t~~~ys~~~~~~~~G---~htlta~A~D~aGn~s~ 78 (190)
T 3pdd_A 15 AG-KDINISATVK--SKTPVSKVEFYNGDT---LISSDTTAPYTAKITGAAVG---AYNLKAVAVLSDGRRIE 78 (190)
T ss_dssp TT-SCEEEEEEEC--CSSCEEEEEEEETTE---EEEEECSSSEEEEECSCCSE---EEEEEEEEEETTSCEEE
T ss_pred CC-CeEEEEEEEe--CCCCEEEEEEEECCE---EEccccCCceEEEeccCCCc---cEEEEEEEEECCCCEee
Confidence 45 5666666665 333455666655420 00001 12236778876666 7999999764 455443
No 82
>1wic_A Hypothetical protein riken cDNA 6030424E15; beta sandwich fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.11.2
Probab=28.88 E-value=1.4e+02 Score=21.81 Aligned_cols=54 Identities=17% Similarity=0.195 Sum_probs=41.8
Q ss_pred CceeEEEEEEEEecCCc-ceeeEEEecCCCCCCCceEecCceeeeeeeecCCcceEEEEEEEEc
Q 031694 45 GAERISVSIDIHNQGTS-TAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAK 107 (155)
Q Consensus 45 g~~~vtV~ytIYNvG~s-~A~dV~l~D~sfp~~~F~~v~G~~s~~~~ri~pg~nvsH~~vv~p~ 107 (155)
.++.++...+|+|..+. -|+.|+-+.+ +.|. | .-....|+||+++.-.+++.|.
T Consensus 33 ~~~~~~~~l~L~N~s~~~VaFKVKTT~p----~~y~-V----rP~~GiI~P~~s~~V~V~lq~~ 87 (152)
T 1wic_A 33 ESGEKKTLIVLTNVTKNIVAFKVRTTAP----EKYR-V----KPSNSSCDPGASIDIIVSPHGG 87 (152)
T ss_dssp SSSCCCEEEEEEBCSSSCEEEEEEESCT----TTEE-E----ESSEEEECTTCEEEEEEEECSS
T ss_pred CCceEEEEEEEEcCCCCeEEEEEECCCC----Ccee-e----cCCCcEECCCCeEEEEEEecCc
Confidence 33677889999999886 6888887753 3452 2 3467899999999999999875
No 83
>3i2z_B RNA chaperone, negative regulator of CSPA transcription; beta barrel, DNA binding protein/transcription, cytoplasm, gene regulation; 1.10A {Salmonella typhimurium} SCOP: b.40.4.5 PDB: 2l15_A 1mjc_A 3mef_A
Probab=28.14 E-value=95 Score=19.96 Aligned_cols=40 Identities=23% Similarity=0.293 Sum_probs=29.4
Q ss_pred CCceEEEEeeeccc----ccccCceeEEEEEEEEecCCcceeeEEE
Q 031694 27 DVPFIVAHKKASLK----RLKSGAERISVSIDIHNQGTSTAYDVSL 68 (155)
Q Consensus 27 ~~a~LlvsK~i~~~----~~v~g~~~vtV~ytIYNvG~s~A~dV~l 68 (155)
.+..+.+|.+-+.. .|.+| +.++++..--..| -.|.+|++
T Consensus 27 g~~dvFvH~s~i~~~g~~~l~~G-~~V~f~~~~~~kG-~~A~~V~~ 70 (71)
T 3i2z_B 27 GSKDVFVHFSAIQTNGFKTLAEG-QRVEFEITNGAKG-PSAANVTA 70 (71)
T ss_dssp CCCCEEEEGGGBCCSSCCCCCTT-CEEEEEEEEETTE-EEEEEEEE
T ss_pred CCccEEEEhHHcccccCcCCCCC-CEEEEEEEECCCC-CEeEEEEe
Confidence 34779999887654 57888 8888777766666 46778875
No 84
>3cu7_A Complement C5; Mg domain, inflammation, anaphylatoxin, cleavage of basic residues, complement alternate pathway, glycoprotein, immune response; HET: NAG; 3.10A {Homo sapiens} PDB: 3kls_A* 3km9_A* 4e0s_A* 3prx_A* 3pvm_A* 4a5w_A* 1xwe_A
Probab=27.85 E-value=94 Score=31.10 Aligned_cols=77 Identities=10% Similarity=0.185 Sum_probs=54.5
Q ss_pred eeEEEEEEEEecCC----cceeeEEEecCCCCC--------------------CCceEecCceeeeeeeecCCcceEEEE
Q 031694 47 ERISVSIDIHNQGT----STAYDVSLTDDSWPQ--------------------DKFDVISGNISQSWERLDAGGILSHSF 102 (155)
Q Consensus 47 ~~vtV~ytIYNvG~----s~A~dV~l~D~sfp~--------------------~~F~~v~G~~s~~~~ri~pg~nvsH~~ 102 (155)
..+.+++.+-+.|. ....+..|.|..+|+ +.+|+-.+.+-.=|++|++++...-.|
T Consensus 1398 ~~~~~~v~~~~~~~~~~~~~~s~maivdv~LpsGfe~~~~~l~~l~~~~~~~~~~~E~~~~~v~~Y~d~~~~~~~~~~~~ 1477 (1676)
T 3cu7_A 1398 DYKRIVACASYKPSREESSSGSSHAVMDISLPTGISANEEDLKALVEGVDQLFTDYQIKDGHVILQLNSIPSSDFLCVRF 1477 (1676)
T ss_dssp -CCEEEEEEEECCCTTCCSSCCCSEEEEEECCTTCEECHHHHHHHHSSTTCSCSBCCEETTEEEEEESCCCSSSCEEEEE
T ss_pred cEEEEEEEEEEcCccccccCCCCcEEEEEecCcCCccCHHHHHHHhhccccceEEEEecCCEEEEEecccCCCCCEEEEE
Confidence 66777887788774 445666666653433 356776777788889999998899999
Q ss_pred EEEEceeeeEEeecEEEEEEc
Q 031694 103 ELDAKVKGMFHGSPALITFRI 123 (155)
Q Consensus 103 vv~p~~~G~f~~t~A~VtY~~ 123 (155)
.++....|.|.-++...=|.-
T Consensus 1478 ~~~~~~~v~~~~Pa~v~vydy 1498 (1676)
T 3cu7_A 1478 RIFELFEVGFLSPATFTVYEY 1498 (1676)
T ss_dssp EEECSSCCSSCCCEEEEEEET
T ss_pred EEEEEeEeccccceEEEEEec
Confidence 999999998755543444443
No 85
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=27.69 E-value=1.2e+02 Score=19.10 Aligned_cols=20 Identities=15% Similarity=0.363 Sum_probs=13.0
Q ss_pred eecCCcceEEEEEEEEceeeeEEe
Q 031694 91 RLDAGGILSHSFELDAKVKGMFHG 114 (155)
Q Consensus 91 ri~pg~nvsH~~vv~p~~~G~f~~ 114 (155)
.++||++.++++ .+.|.|.|
T Consensus 55 ~~~~g~~~~~~f----~~~G~y~~ 74 (91)
T 1bxv_A 55 AFSPGETFEATF----SEPGTYTY 74 (91)
T ss_dssp ECSTTCEEEEEC----CSCEEEEE
T ss_pred eeCCCCEEEEEe----CCCEEEEE
Confidence 578888766654 55666544
No 86
>3uam_A Chitin binding domain; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, protein binding; 2.00A {Burkholderia pseudomallei}
Probab=27.61 E-value=1.4e+02 Score=23.74 Aligned_cols=70 Identities=19% Similarity=0.331 Sum_probs=46.9
Q ss_pred ccCceeEEEEEEEEecCCcceeeEEEecCCCCCC------CceEe-----cCceeeee-----eeecCCcceEEEEEEEE
Q 031694 43 KSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQD------KFDVI-----SGNISQSW-----ERLDAGGILSHSFELDA 106 (155)
Q Consensus 43 v~g~~~vtV~ytIYNvG~s~A~dV~l~D~sfp~~------~F~~v-----~G~~s~~~-----~ri~pg~nvsH~~vv~p 106 (155)
..| ..++|+|...=.....=..+=|+.++|.+. +||++ .+...-.| +...|+..++|.+.| |
T Consensus 109 ~~G-~~~tf~w~~TA~H~ts~f~~YITK~gwdp~~pLtw~dLEl~pf~~~~~~~~p~~~~~~d~~~~p~~~y~~~v~l-P 186 (216)
T 3uam_A 109 RSG-QSLQISWSYSMPHKTRRWTYWITKPGWDTQARLARAHFEPDPLKVYLNTYQPYWGPDADKELIPQGETIHEFNL-P 186 (216)
T ss_dssp CTT-CEEEEEEEEESCCCEEEEEEEEBCTTCCTTSCCCGGGBCSSCSEEEECCCCSTTSTTHHHHHSCSSCEEEEEEC-C
T ss_pred ccC-ceEEEEEEeeccCCCceEEEEECCCCCCCCCcccHHHccccceeeccCCCccccccccccccCCCCeEEEEEEC-C
Confidence 346 678999998888876678999999989863 45532 11111111 223467789999877 5
Q ss_pred ceeeeEEe
Q 031694 107 KVKGMFHG 114 (155)
Q Consensus 107 ~~~G~f~~ 114 (155)
.+.|++-+
T Consensus 187 ~RsG~hVI 194 (216)
T 3uam_A 187 TRTGYHVL 194 (216)
T ss_dssp SCCEEEEE
T ss_pred CCcCCEEE
Confidence 88888754
No 87
>2dia_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=27.19 E-value=1.5e+02 Score=20.16 Aligned_cols=67 Identities=18% Similarity=0.178 Sum_probs=44.3
Q ss_pred cccccCceeEEEEEEEEecCCcceeeEEEecCCCCCCCceEecCceeeeeeeecCCcceEEEEEEEEceeeeEEeecEEE
Q 031694 40 KRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALI 119 (155)
Q Consensus 40 ~~~v~g~~~vtV~ytIYNvG~s~A~dV~l~D~sfp~~~F~~v~G~~s~~~~ri~pg~nvsH~~vv~p~~~G~f~~t~A~V 119 (155)
+...+| +...++++-.+.|. ....|++.+++ |. .-+-.+.-..+=++.+.-+|...|.|.+ .|
T Consensus 22 ~~~~~g-~~~~F~V~~~daG~-~~l~v~i~~~~----------g~--~~~~~v~d~~dGty~v~Y~p~~~G~y~i---~V 84 (113)
T 2dia_A 22 EHGKVG-EAGLLSVDCSEAGP-GALGLEAVSDS----------GT--KAEVSIQNNKDGTYAVTYVPLTAGMYTL---TM 84 (113)
T ss_dssp TCEETT-CCCCEEEEESSCCS-CCEEEEEEETT----------TE--ECEEEEEECTTSEEEEEEECSSCEEEEE---EE
T ss_pred CCeecC-CCEEEEEEECCCCC-ccEEEEEECCC----------CC--EeeEEEEECCCCEEEEEEEeCCCccEEE---EE
Confidence 334667 78888888888877 45677777531 21 2222344445567888888999998877 67
Q ss_pred EEEc
Q 031694 120 TFRI 123 (155)
Q Consensus 120 tY~~ 123 (155)
+|..
T Consensus 85 ~~~g 88 (113)
T 2dia_A 85 KYGG 88 (113)
T ss_dssp EETT
T ss_pred EECC
Confidence 7754
No 88
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=26.67 E-value=1.4e+02 Score=19.73 Aligned_cols=61 Identities=11% Similarity=0.191 Sum_probs=43.1
Q ss_pred EEEEEEecCCcceeeEEEecCCCCCCCceEecCceeeeeeeecCCcceEEEEEEEEceeeeEEee
Q 031694 51 VSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGS 115 (155)
Q Consensus 51 V~ytIYNvG~s~A~dV~l~D~sfp~~~F~~v~G~~s~~~~ri~pg~nvsH~~vv~p~~~G~f~~t 115 (155)
+.+.+.+ .......+++-|...-.++| =|......+.|..|....+.+.+.+...|...+.
T Consensus 60 f~f~v~~-~~~~~l~i~V~d~d~~~~~~---iG~~~i~l~~l~~~~~~~~~~~L~~~~~g~i~~~ 120 (126)
T 1rlw_A 60 FEFILDP-NQENVLEITLMDANYVMDET---LGTATFTVSSMKVGEKKEVPFIFNQVTEMVLEMS 120 (126)
T ss_dssp EEEEECT-TSCCEEEEEEEECCSSCCEE---EEEEEEEGGGSCTTCEEEEEEEETTTEEEEEEEE
T ss_pred EEEEecC-CCCCEEEEEEEECCCCCCce---eEEEEEEHHHccCCCcEEEEEEcCCCceEEEEEE
Confidence 3344433 34567888888833223433 4788888899999999999999998888877664
No 89
>2yty_A Cold shock domain-containing protein E1; cell-free protein synthesis, beta-barrel, translational REGU RNA chaperone, RNA/DNA binding, QB fold; NMR {Homo sapiens}
Probab=26.33 E-value=34 Score=23.30 Aligned_cols=46 Identities=17% Similarity=0.093 Sum_probs=32.3
Q ss_pred CCceEEEEeeecc---cccccCceeEEEEEEEEecCCcceeeEEEecCCC
Q 031694 27 DVPFIVAHKKASL---KRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSW 73 (155)
Q Consensus 27 ~~a~LlvsK~i~~---~~~v~g~~~vtV~ytIYNvG~s~A~dV~l~D~sf 73 (155)
.+..+++|-+.+. +.|.+| +.++++..--.-|.-.|.+|.+.+..+
T Consensus 38 gg~DvFvH~S~i~~~~~~L~~G-~~V~F~~~~g~~Gk~~A~~V~~~~~~~ 86 (88)
T 2yty_A 38 HDKEIFFHYSEFSGDVDSLELG-DMVEYSLSKGKGNKVSAEKVNKTSGPS 86 (88)
T ss_dssp SSCEEEEETTTCCSCTTTCCTT-CEEEECCCCCSCSCCBCCSCEECCCCC
T ss_pred CCceEEEEEhhhccccCcCCCC-CEEEEEEEECCCCCeEeEEEEECCCCC
Confidence 3578999987765 367888 787766654444544789999987643
No 90
>2b39_A C3; thioester, immune defense, immune system; HET: NAG BMA; 3.00A {Bos taurus}
Probab=26.11 E-value=4.2e+02 Score=26.50 Aligned_cols=82 Identities=11% Similarity=0.076 Sum_probs=55.3
Q ss_pred cCceeEEEEEEEEecCCcceeeEEEecCCCCC--------------------CCceE----ecCceeeeeeeecCCcceE
Q 031694 44 SGAERISVSIDIHNQGTSTAYDVSLTDDSWPQ--------------------DKFDV----ISGNISQSWERLDAGGILS 99 (155)
Q Consensus 44 ~g~~~vtV~ytIYNvG~s~A~dV~l~D~sfp~--------------------~~F~~----v~G~~s~~~~ri~pg~nvs 99 (155)
.| ..+.+++.+-+.|+.. .+..+.|...|. ..+|+ -.+.+..=+|+|++|+...
T Consensus 1379 ~~-~~~~~~v~~~~~~~~~-~~m~ivdv~lpsGfe~~~~~l~~l~~~~~~~~~~~E~~~~~~d~~v~~y~d~l~~~~~~~ 1456 (1661)
T 2b39_A 1379 AK-GSMILDICTKYLGDQD-ATMSILDISMMTGFSPDVEDLKTLSTGVDRYISKYEMNRDSNKNTLIIYLDKVSHTVEDC 1456 (1661)
T ss_dssp CS-CEEEEEEEEEECSSSC-BCSEEEEEECCTTEEECHHHHHHHHHSSBCSCSEEEEESSSSSCEEEEEESCBCSSSCEE
T ss_pred CC-cEEEEEEEEEecCCCC-CceEEEEEecCcCCccCHhHHHHHhhccccceEEEEeeecCCCCEEEEEeccCCCCCceE
Confidence 45 7888888888888765 488888764443 12344 2344555678899998899
Q ss_pred EEEEEEEceeeeEEeecE--EEEEEcCCcc
Q 031694 100 HSFELDAKVKGMFHGSPA--LITFRIPTKA 127 (155)
Q Consensus 100 H~~vv~p~~~G~f~~t~A--~VtY~~se~~ 127 (155)
-.|.++....|.|.-++. +..|..++..
T Consensus 1457 ~~~~~~~~~~v~~~~Pa~v~vydyY~p~~~ 1486 (1661)
T 2b39_A 1457 LSFKVHQYFNVGLIQPGAVKVYSYYNLDET 1486 (1661)
T ss_dssp EEEEEEECSEEESCCCEEEEEEETTCTTSE
T ss_pred EEEEEEEEeEccccCceEEEEEeccCCccc
Confidence 999999888888744332 3344455443
No 91
>2ccl_A Cellulosomal scaffolding protein A; cell adhesion, cohesin/dockerin complex, cellulosome, cohesi dockerin, scaffolding, cellulose degradation; 2.03A {Clostridium thermocellum} SCOP: b.2.2.2 PDB: 1ohz_A
Probab=26.02 E-value=1.5e+02 Score=22.32 Aligned_cols=89 Identities=13% Similarity=0.157 Sum_probs=55.2
Q ss_pred cccccccCceeEEEEEEEEecCC--cceeeEEEecCCCCCCCceEecCc---e--------eeeeeeecCCcceEEEEEE
Q 031694 38 SLKRLKSGAERISVSIDIHNQGT--STAYDVSLTDDSWPQDKFDVISGN---I--------SQSWERLDAGGILSHSFEL 104 (155)
Q Consensus 38 ~~~~~v~g~~~vtV~ytIYNvG~--s~A~dV~l~D~sfp~~~F~~v~G~---~--------s~~~~ri~pg~nvsH~~vv 104 (155)
-.....+| +.++|-+++-|+-+ -...|..|. |+++.+|+++.. + +..|...+-+..+.-.+.=
T Consensus 11 g~~~~~~G-dtv~VpV~~~~Vp~~GI~s~df~l~---YD~~~Lev~sV~~G~iv~~~~~~~~F~~~~~~~~G~i~~l~~d 86 (158)
T 2ccl_A 11 GKVTGSVG-TTVEIPVYFRGVPSKGIANCDFVFR---YDPNVLEIIGIDPGDIIVDPNPTKSFDTAIYPDRKIIVFLFAE 86 (158)
T ss_dssp CEECCCTT-CEEEEEEEEESCCTTCBSEEEEEEE---CCTTTEEEEEEEECTTCCCSSGGGTEEEEEETTTTEEEEEEEC
T ss_pred CcccccCC-CEEEEEEEEecCCccceEEEEEEEE---ECCcceEEEeecCcceecCCCcccccceeeecCCCEEEEEEee
Confidence 34567889 99999999999988 355566665 888999887632 2 4555555444444333220
Q ss_pred ------E-EceeeeEEeecEEEEEEcCCccceeEEee
Q 031694 105 ------D-AKVKGMFHGSPALITFRIPTKAALQEAYS 134 (155)
Q Consensus 105 ------~-p~~~G~f~~t~A~VtY~~se~~~~q~a~S 134 (155)
+ -+..|.| |.|+++...++...+.++
T Consensus 87 ~~~~g~~~It~dGvf----a~I~FKvk~~a~~~i~i~ 119 (158)
T 2ccl_A 87 DSGTGAYAITKDGVF----AKIRATVKSSAPGYITFD 119 (158)
T ss_dssp SSSSSTTSBCSCEEE----EEEEEEECCSSCEEEEEE
T ss_pred cCccccceEcCCeeE----EEEEEEEecCCCccEEec
Confidence 0 1223444 788888866654334443
No 92
>3o81_A Beta-2-microglobulin; IG-like C1-type (immunoglobulin-like) domain, histocompatibi antigen, MHC class I molecule from B21 chicken, immune SYST; 2.00A {Gallus gallus}
Probab=25.88 E-value=72 Score=22.25 Aligned_cols=47 Identities=13% Similarity=0.101 Sum_probs=16.6
Q ss_pred hHHHHHHHHHHHHhhcccCCCCceEEEE-eeecccccccCceeEEEEEEEEec
Q 031694 7 KSLISVLIALFLISSSFASSDVPFIVAH-KKASLKRLKSGAERISVSIDIHNQ 58 (155)
Q Consensus 7 ~~~~~~llal~~v~~~~~~~~~a~Llvs-K~i~~~~~v~g~~~vtV~ytIYNv 58 (155)
+..+++|++++|++.+.+....|.+-+. ++-. -.| +.+++.-.+++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~P~V~v~~~~~~----~~g-~~~~L~C~v~gF 50 (119)
T 3o81_A 3 KAAAVVLVTLVALLGLAQADLTPKVQVYSRFPA----SAG-TKNVLNCFAAGF 50 (119)
T ss_dssp ------------------CCCSCEEEEEESSCC----CTT-SCEEEEEEEEEE
T ss_pred hhHHHHHHHHHHhhhccCCccCCceEEEcCCcc----cCC-CcEEEEEEEecc
Confidence 3445667778887777777778887773 3321 124 556666666654
No 93
>2vn6_A Cohesin, scaffolding protein; cell adhesion, carbohydrate metabolism, polysaccharide degradation, hydrolase, glycosidase, cellulose degradation; 1.49A {Clostridium cellulolyticum} SCOP: b.2.2.2 PDB: 2vn5_A 1g1k_A
Probab=25.55 E-value=1.5e+02 Score=22.12 Aligned_cols=44 Identities=14% Similarity=0.271 Sum_probs=35.7
Q ss_pred ecccccccCceeEEEEEEEEecCC---cceeeEEEecCCCCCCCceEecCc
Q 031694 37 ASLKRLKSGAERISVSIDIHNQGT---STAYDVSLTDDSWPQDKFDVISGN 84 (155)
Q Consensus 37 i~~~~~v~g~~~vtV~ytIYNvG~---s~A~dV~l~D~sfp~~~F~~v~G~ 84 (155)
+-.....+| +.++|.+++-|+-+ -...|..|. |++..+|+++..
T Consensus 16 ig~~s~k~G-dtv~VpV~~~nvp~~~gi~s~~f~l~---YD~~~Lev~sV~ 62 (151)
T 2vn6_A 16 VGTANGKPG-DTVTVPVTFADVAKMKNVGTCNFYLG---YDASLLEVVSVD 62 (151)
T ss_dssp ECEEEECTT-CEEEEEEEEESTTTTTCBCEEEEEEE---CCTTTEEEEEEE
T ss_pred ECcccccCC-CEEEEEEEEecCCccCceeEEEEEEE---ECCceEEEEeec
Confidence 345667889 99999999999987 378888887 888999888754
No 94
>2hr0_B Complement C3 alpha' chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2icf_B* 2wii_B* 2win_B* 3g6j_B 3l5n_B* 2a73_B* 2i07_B* 2xwj_B* 2xwb_B* 2a74_C* 2ice_C* 2qki_C* 3l3o_F* 3nms_C* 3nsa_C* 3ohx_C* 3t4a_C 2ice_B* 3l3o_B* 3nms_B* ...
Probab=25.55 E-value=2.3e+02 Score=26.40 Aligned_cols=71 Identities=10% Similarity=0.104 Sum_probs=48.6
Q ss_pred ccCceeEEEEEEEEecCCcceeeEEEecCCCCCC--------------------CceE-----ecCceeeeeeeecCCcc
Q 031694 43 KSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQD--------------------KFDV-----ISGNISQSWERLDAGGI 97 (155)
Q Consensus 43 v~g~~~vtV~ytIYNvG~s~A~dV~l~D~sfp~~--------------------~F~~-----v~G~~s~~~~ri~pg~n 97 (155)
..| ..+.+++.+-+.|+.. .+..+.|...|.- .+|+ -.+.+-.=+|+|++|+.
T Consensus 631 ~~~-~~~~~~v~v~~~~~~~-~~maivdv~lpsGfe~~~~~l~~l~~~~~~~~~~~E~~~~~~~d~~v~~Y~d~l~~~~~ 708 (915)
T 2hr0_B 631 DAK-NTMILEICTRYRGDQD-ATMSILDISMMTGFAPDTDDLKQLANGVDRYISKYELDKAFSDRNTLIIYLDKVSHSED 708 (915)
T ss_dssp SCS-EEEEEEEEEEECSSSC-BCSEEEEEECCSSEEECHHHHHHHHHSSSCSCSEECCCC----CCEEEEEESCBCSSSC
T ss_pred CCC-cEEEEEEEEEecCCCC-CCceEEEEecCCCCccCHhhHHHHhhccccceEEEEeecccCCCCEEEEEeccCCCCCC
Confidence 345 7788888888888654 4677776544431 2333 33444556788999988
Q ss_pred eEEEEEEEEceeeeEEee
Q 031694 98 LSHSFELDAKVKGMFHGS 115 (155)
Q Consensus 98 vsH~~vv~p~~~G~f~~t 115 (155)
..-.|.++....|.|.-+
T Consensus 709 ~~~~~~~~~~~~v~~~~P 726 (915)
T 2hr0_B 709 DCLAFKVHQYFNVELIQP 726 (915)
T ss_dssp CCEEEEEEESSCCSSCCC
T ss_pred EEEEEEEEEEEEeccccc
Confidence 999999998888876443
No 95
>3ije_A Integrin alpha-V; integrin structure, activation, EGF domains, FLIM, cell SIGN cell adhesion, cleavage on PAIR of basic residues; HET: NAG BMA MAN; 2.90A {Homo sapiens} PDB: 4g1e_A* 4g1m_A* 1jv2_A* 1l5g_A* 1m1x_A* 1u8c_A*
Probab=25.46 E-value=92 Score=29.69 Aligned_cols=45 Identities=22% Similarity=0.361 Sum_probs=31.8
Q ss_pred eEEEEeeecccccccC-ceeEEEEEEEEecCCcceeeEEEecCCCCCC
Q 031694 30 FIVAHKKASLKRLKSG-AERISVSIDIHNQGTSTAYDVSLTDDSWPQD 76 (155)
Q Consensus 30 ~LlvsK~i~~~~~v~g-~~~vtV~ytIYNvG~s~A~dV~l~D~sfp~~ 76 (155)
.|-++=+...+.+++| .+++++++++.|.|+ .||+-+|. -.||+.
T Consensus 605 dL~l~~~~~~~~~~vg~~~~l~l~v~v~N~gE-~Ay~t~l~-~~~p~~ 650 (967)
T 3ije_A 605 KLEVSVDSDQKKIYIGDDNPLTLIVKAQNQGE-GAYEAELI-VSIPLQ 650 (967)
T ss_dssp CEEEEEECSSCEEETTSCEEEEEEEEEEECSS-CEESCEEE-EECCTT
T ss_pred CEEEEEEeCCceEEecCCcEEEEEEEEEeCCC-CcccceEE-EEeCCC
Confidence 3444444444455554 478999999999997 59998888 457765
No 96
>2cri_A Vesicle-associated membrane protein-associated protein A; VAP-A, VAP-33, beta sandwitch fold, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=25.03 E-value=1.3e+02 Score=21.76 Aligned_cols=53 Identities=15% Similarity=0.323 Sum_probs=40.8
Q ss_pred eeEEEEEEEEecCCc-ceeeEEEecCCCCCCCceEecCceeeeeeeecCCcceEEEEEEEEce
Q 031694 47 ERISVSIDIHNQGTS-TAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKV 108 (155)
Q Consensus 47 ~~vtV~ytIYNvG~s-~A~dV~l~D~sfp~~~F~~v~G~~s~~~~ri~pg~nvsH~~vv~p~~ 108 (155)
+.++-..+|+|..+. -|+.|+-+.+ +.| .| .-....|+||+++.-.+.+.|..
T Consensus 31 ~~~~~~l~L~N~s~~~VaFKVKTT~p----~~y-~V----rP~~GiI~P~~s~~v~V~l~~~~ 84 (147)
T 2cri_A 31 DVVTTNLKLQNPSDRKVCFKVKTTAP----RRY-CV----RPNSGIIDPGSIVTVSVMLQPFD 84 (147)
T ss_dssp SCCCEEEEEECCSSSCEEEEEEESCT----TSE-EE----ESSEEECCTTCEEEEEEEECCCC
T ss_pred ceEEEEEEEECCCCCcEEEEEECCCC----ccE-EE----cCCCcEECCCCeEEEEEEECCCc
Confidence 678889999999887 6788887753 345 23 34568999999999999988753
No 97
>3fcs_A Integrin, alpha 2B; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens}
Probab=24.56 E-value=47 Score=31.77 Aligned_cols=31 Identities=23% Similarity=0.452 Sum_probs=26.9
Q ss_pred cCceeEEEEEEEEecCCcceeeEEEecCCCCCC
Q 031694 44 SGAERISVSIDIHNQGTSTAYDVSLTDDSWPQD 76 (155)
Q Consensus 44 ~g~~~vtV~ytIYNvG~s~A~dV~l~D~sfp~~ 76 (155)
.| ..+..+|+|+|.|.++.-+++|. -.||.+
T Consensus 776 iG-p~v~~~y~V~N~Gps~v~~~~L~-I~wP~~ 806 (959)
T 3fcs_A 776 WG-PKVEHTYELHNNGPGTVNGLHLS-IHLPGQ 806 (959)
T ss_dssp CC-CEEEEEEEEEECSSSCEEEEEEE-EEEESC
T ss_pred cC-CCEEEEEEEEeCCCCccCCEEEE-EEEchh
Confidence 35 68999999999999999999988 568876
No 98
>4dh2_A Cellulosome anchoring protein cohesin region; cellulosome, cohesin, type I cohesin-dockerin, Pro protein interaction, cell adhesion; 1.75A {Clostridium thermocellum}
Probab=23.79 E-value=1.7e+02 Score=22.57 Aligned_cols=48 Identities=13% Similarity=0.339 Sum_probs=34.4
Q ss_pred EEEEeeecccccccCceeEEEEEEEEecCCc--ceeeEEEecCCCCCCCceEec
Q 031694 31 IVAHKKASLKRLKSGAERISVSIDIHNQGTS--TAYDVSLTDDSWPQDKFDVIS 82 (155)
Q Consensus 31 LlvsK~i~~~~~v~g~~~vtV~ytIYNvG~s--~A~dV~l~D~sfp~~~F~~v~ 82 (155)
-.++=.+.......| ..++|.+++.|+=++ .+.|..|. |.+...++++
T Consensus 15 ~~vqi~Vg~~~~k~G-dtftVpV~l~~VPstGI~~~dF~l~---YD~s~Lev~s 64 (170)
T 4dh2_A 15 YILDVLVEGVKAKAG-DTVEIPLKFENVPSHGIQSFNLSLY---YDSKAIEVLK 64 (170)
T ss_dssp EEEEEEECCEEEETT-CEEEEEEEEESCCTTCBCEEEEEEE---CCTTTEEEEE
T ss_pred cEEEEEEeeeEEecC-CEEEEEEEEccCccCCeEEEeEEEE---ECCCEEEEEe
Confidence 445555666778888 999999999999333 44455554 7778777765
No 99
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.27 E-value=1.8e+02 Score=19.65 Aligned_cols=50 Identities=16% Similarity=0.292 Sum_probs=35.1
Q ss_pred EEEEEEec--CCcceeeEEEec-CCCCCCCceEecCceeeeeeeecCCcceEEEEE
Q 031694 51 VSIDIHNQ--GTSTAYDVSLTD-DSWPQDKFDVISGNISQSWERLDAGGILSHSFE 103 (155)
Q Consensus 51 V~ytIYNv--G~s~A~dV~l~D-~sfp~~~F~~v~G~~s~~~~ri~pg~nvsH~~v 103 (155)
+.+.+.+. .......|++-| +.+..++| =|........|..|....+-+.
T Consensus 57 f~f~v~~~~~~~~~~l~i~V~d~d~~~~~~~---lG~~~i~l~~l~~~~~~~~w~~ 109 (140)
T 2dmh_A 57 LEFDLRGIPLDFSSSLGIIVKDFETIGQNKL---IGTATVALKDLTGDQSRSLPYK 109 (140)
T ss_dssp EEEECSSCCCCTTCEEEEEEEETTCSSSCCC---CEEEEEEGGGTCSSSCEEEEEE
T ss_pred EEEEecccccCCCCEEEEEEEECCCCCCCce---EEEEEEEHHHhccCCCceeEEe
Confidence 34444432 245778899988 55656655 4778888888989988888877
No 100
>3gld_A Pilin; all-beta, cell adhesion, structural protein, isopeptid WALL, fimbrium, isopeptide bond, membrane; 2.03A {Streptococcus pyogenes serotype M1} PDB: 3b2m_A 3gle_A
Probab=23.01 E-value=2.6e+02 Score=23.22 Aligned_cols=65 Identities=14% Similarity=0.106 Sum_probs=38.5
Q ss_pred eEEEEeeecccccccCceeEEEEEEEEecC---CcceeeEE-------------EecCCCCCCCceEecCceeeeeeeec
Q 031694 30 FIVAHKKASLKRLKSGAERISVSIDIHNQG---TSTAYDVS-------------LTDDSWPQDKFDVISGNISQSWERLD 93 (155)
Q Consensus 30 ~LlvsK~i~~~~~v~g~~~vtV~ytIYNvG---~s~A~dV~-------------l~D~sfp~~~F~~v~G~~s~~~~ri~ 93 (155)
.|-++|++.-+..--. ++..+++++-.-. ....++++ +.+. ....|.|-+|+. ..+..||
T Consensus 161 ~L~V~K~VtG~~~dk~-k~F~Ftl~l~~~~~~~~g~~y~~~~~~~~G~~~~~~~~~~G--~~~tftLKhGes-i~i~gLP 236 (295)
T 3gld_A 161 TLTVKKKVSGTGGDRS-KDFNFGLTLKANQYYKASEKVMIEKTTKGGQAPVQTEASID--QLYHFTLKDGES-IKVTNLP 236 (295)
T ss_dssp EEEEEEEEESTTCCTT-CCEEEEEEECCBTTBCTTCEEEEEEECSSSCCCEEEEEETT--SCEEEEECTTCE-EEEEEEE
T ss_pred ceEEEEEEECCCcccC-CcEEEEEEEeCCccccCCceEEEEEeccCCcccceeEEecC--ceEEEEECCCCE-EEEeCCC
Confidence 5889999876654444 6777777764432 11223333 3321 133576666664 7888888
Q ss_pred CCcce
Q 031694 94 AGGIL 98 (155)
Q Consensus 94 pg~nv 98 (155)
.|...
T Consensus 237 ~G~~Y 241 (295)
T 3gld_A 237 VGVDY 241 (295)
T ss_dssp TTCEE
T ss_pred CCCEE
Confidence 88654
No 101
>3fcs_A Integrin, alpha 2B; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens}
Probab=22.91 E-value=86 Score=29.95 Aligned_cols=47 Identities=23% Similarity=0.374 Sum_probs=32.7
Q ss_pred ceEEEEeeecccccccC-ceeEEEEEEEEecCCcceeeEEEecCCCCCCC
Q 031694 29 PFIVAHKKASLKRLKSG-AERISVSIDIHNQGTSTAYDVSLTDDSWPQDK 77 (155)
Q Consensus 29 a~LlvsK~i~~~~~v~g-~~~vtV~ytIYNvG~s~A~dV~l~D~sfp~~~ 77 (155)
|.|-++-++....+++| .+++++++++.|.|+ .||+-+|. -.+|+.-
T Consensus 610 ~dL~l~~~~~~~~l~vg~~~~l~l~v~v~N~GE-dAY~t~l~-~~~p~~l 657 (959)
T 3fcs_A 610 PQLQLTASVTGSPLLVGADNVLELQMDAANEGE-GAYEAELA-VHLPQGA 657 (959)
T ss_dssp CCEEEEEEEESCSEETTSCCCEEEEEEEEECSS-CBTTEEEE-EECCTTE
T ss_pred cceEEEEEecCceEEecCCcEEEEEEEEecCCC-CcccceEE-EEeCCCC
Confidence 34555544444444444 478999999999998 58998888 4577653
No 102
>3jts_B Beta-2-microglobulin; alpha helix, beta sheet, beta barrel, immune response, MHC I membrane, transmembrane, disease mutation; 2.80A {Homo sapiens}
Probab=22.70 E-value=1e+02 Score=21.48 Aligned_cols=47 Identities=17% Similarity=0.182 Sum_probs=16.7
Q ss_pred hHHHHHHHHHHHHhhcccCCCCceEEEE-eeecccccccCceeEEEEEEEEec
Q 031694 7 KSLISVLIALFLISSSFASSDVPFIVAH-KKASLKRLKSGAERISVSIDIHNQ 58 (155)
Q Consensus 7 ~~~~~~llal~~v~~~~~~~~~a~Llvs-K~i~~~~~v~g~~~vtV~ytIYNv 58 (155)
+..+++|++++|++.+.+....|.+-+. ++- ...| +.+++.-.+++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~P~V~v~~~~~----~~~g-~~~~L~C~~~gF 50 (119)
T 3jts_B 3 RSVALAVLALLSLSGLEAIQRTPKIQVYSRHP----AENG-KSNFLNCYVSGF 50 (119)
T ss_dssp ------------------CCBCCEEEEEESSC----CCTT-SCEEEEEEEEEE
T ss_pred hhhHHHHHHHHhhhhcCCCccCCEEEEEccCc----ccCC-CcEEEEEEEeCc
Confidence 4455678888888777767777887763 321 1234 566766666655
No 103
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=22.60 E-value=1.8e+02 Score=19.50 Aligned_cols=68 Identities=16% Similarity=0.263 Sum_probs=43.1
Q ss_pred EEEEEEEecCCcceeeEEEec-CCCCCCCceEecCceeeeeeee-cCCcceEEEEEEEE--ceeeeEEeecEEEEEEcCC
Q 031694 50 SVSIDIHNQGTSTAYDVSLTD-DSWPQDKFDVISGNISQSWERL-DAGGILSHSFELDA--KVKGMFHGSPALITFRIPT 125 (155)
Q Consensus 50 tV~ytIYNvG~s~A~dV~l~D-~sfp~~~F~~v~G~~s~~~~ri-~pg~nvsH~~vv~p--~~~G~f~~t~A~VtY~~se 125 (155)
++.+.+.+ ......+++-| +.+..+.| =|......+.| ..|+...+.+.|.+ +..|...+ .++|.+.+
T Consensus 61 ~f~f~v~~--~~~~l~~~V~d~~~~~~d~~---lG~~~i~l~~l~~~~~~~~~w~~L~~~~~~~G~i~l---~l~~~p~~ 132 (136)
T 1wfj_A 61 TFIFTVSE--GTTELKAKIFDKDVGTEDDA---VGEATIPLEPVFVEGSIPPTAYNVVKDEEYKGEIWV---ALSFKPSG 132 (136)
T ss_dssp EEEEEEES--SCCEEEEEECCSSSCTTTCC---SEEEEEESHHHHHHSEEEEEEEEEEETTEEEEEEEE---EEEEEECC
T ss_pred EEEEEECC--CCCEEEEEEEECCCCCCCce---EEEEEEEHHHhccCCCCCcEEEEeecCCccCEEEEE---EEEEEeCC
Confidence 34455555 56788999988 55656655 46777777777 56665666676662 23466655 56666544
No 104
>4b7l_A Filamin-B; structural protein, FR 1 filamin hinge ABD-1; 2.05A {Homo sapiens} PDB: 2wfn_A
Probab=22.04 E-value=2.2e+02 Score=23.65 Aligned_cols=68 Identities=19% Similarity=0.148 Sum_probs=44.2
Q ss_pred cccccCceeEEEEEEEEecCCcceeeEEEecCCCCCCCceEecCce-eeeeeeecCCcceEEEEEEEEceeeeEEeecEE
Q 031694 40 KRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNI-SQSWERLDAGGILSHSFELDAKVKGMFHGSPAL 118 (155)
Q Consensus 40 ~~~v~g~~~vtV~ytIYNvG~s~A~dV~l~D~sfp~~~F~~v~G~~-s~~~~ri~pg~nvsH~~vv~p~~~G~f~~t~A~ 118 (155)
....+| +...++++--+.|.+ ..+|.+.++ +|.. ..... .....+-++.+.-+|+..|.|.+ .
T Consensus 267 ~g~~vg-~p~~F~Vdt~~AG~g-~l~v~V~~P----------~G~~~~~~v~-~~~~~~gty~v~y~P~~~G~~~I---~ 330 (347)
T 4b7l_A 267 TGNMVK-QPAKFTVDTISAGQG-DVMVFVEDP----------EGNKEEAQVT-PDSDKNKTYSVEYLPKVTGLHKV---T 330 (347)
T ss_dssp SCCCTT-SCEEEEEECTTTCSC-CEEEEEECT----------TSCEEECEEE-ESSTTCSEEEEEECCCSSSEEEE---E
T ss_pred cCceeC-CEEEEEEEeCCCCCC-ceEEEEECC----------CCCeecCEEE-EEcCCCCEEEEEEEECCCEeEEE---E
Confidence 346778 888888887787764 468888864 2432 22332 22334456777778888888887 5
Q ss_pred EEEEc
Q 031694 119 ITFRI 123 (155)
Q Consensus 119 VtY~~ 123 (155)
|+|..
T Consensus 331 V~~~g 335 (347)
T 4b7l_A 331 VLFAG 335 (347)
T ss_dssp EEETT
T ss_pred EEECC
Confidence 66653
No 105
>3e0e_A Replication protein A; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 1.60A {Methanococcus maripaludis} PDB: 2k5v_A
Probab=21.80 E-value=1.9e+02 Score=19.36 Aligned_cols=50 Identities=18% Similarity=0.331 Sum_probs=35.5
Q ss_pred cccccCceeEEEEEEEEecCCc-----------ceeeEEEecCCCCCCCceEecCceeee-ee-----eecCCcceEE
Q 031694 40 KRLKSGAERISVSIDIHNQGTS-----------TAYDVSLTDDSWPQDKFDVISGNISQS-WE-----RLDAGGILSH 100 (155)
Q Consensus 40 ~~~v~g~~~vtV~ytIYNvG~s-----------~A~dV~l~D~sfp~~~F~~v~G~~s~~-~~-----ri~pg~nvsH 100 (155)
..+..| +.+++...|-+.|.. .-.++.|.|+ +|+..++ |+ .|.||..+.-
T Consensus 6 ~dl~~g-~~v~i~~~V~~~~~~r~~~~~~G~~~~v~~~~l~De----------TG~I~~tlW~~~~~~~i~~Gdvv~i 72 (97)
T 3e0e_A 6 SELMPN-LSGTINAEVVTAYPKKEFSRKDGTKGQLKSLFLKDD----------TGSIRGTLWNELADFEVKKGDIAEV 72 (97)
T ss_dssp GGCCTT-EEEEEEEEEEEECCCEEEC----CCEEEEEEEEEET----------TEEEEEEEEGGGGGCCCCTTCEEEE
T ss_pred HHCCCC-CcEEEEEEEEECCCceEEEcCCCCeeEEEEEEEECC----------CCcEEEEEECCccccccCCCCEEEE
Confidence 566677 788888888877732 3456777776 5777776 87 5888886543
No 106
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=20.54 E-value=4.2e+02 Score=23.85 Aligned_cols=68 Identities=10% Similarity=0.047 Sum_probs=41.3
Q ss_pred EEEEEEEEecCCc-ceeeEEEecCCCCCCCceEecCceeeeeeeecCCcceEEEEEEEEce--eeeEEeecEEEEEEcC
Q 031694 49 ISVSIDIHNQGTS-TAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKV--KGMFHGSPALITFRIP 124 (155)
Q Consensus 49 vtV~ytIYNvG~s-~A~dV~l~D~sfp~~~F~~v~G~~s~~~~ri~pg~nvsH~~vv~p~~--~G~f~~t~A~VtY~~s 124 (155)
.+|+=|+.|+|+. .-|.+++.- +..+++.-=-....|. ..|++.+.+++++++. .+.|.| ..++..++
T Consensus 560 ~~~~Rtvtnvg~~~~~y~~~v~~----p~g~~v~v~P~~l~f~--~~~~~~~f~v~~~~~~~~~~~~~f--g~l~w~~~ 630 (649)
T 3i6s_A 560 QKFKRTVTNVGKGAATYKAKLKA----PKNSTISVSPQILVFK--NKNEKQSYTLTIRYIGDEGQSRNV--GSITWVEQ 630 (649)
T ss_dssp EEEEEEEEECC--CEEEEEEEEC----CTTEEEEEESSEEEEC--C-CCEEEEEEEEEECCC---CCCE--EEEEEEET
T ss_pred EEEEEEEEEeCCCCcEEEEEEec----CCCCEEEEECCEEEEe--cCCCEEEEEEEEEecccCCCceEE--EEEEEEcC
Confidence 8999999999985 568888872 3344432211123333 3689999999998763 344444 56667664
No 107
>2ytv_A Cold shock domain-containing protein E1; cell-free protein synthesis, beta-barrel, translational REGU RNA chaperone, RNA/DNA binding, QB fold; NMR {Homo sapiens}
Probab=20.45 E-value=57 Score=21.69 Aligned_cols=43 Identities=19% Similarity=0.310 Sum_probs=30.4
Q ss_pred CceEEEEeeeccc--ccccCceeEEEEEEEEec-CCcceeeEEEecC
Q 031694 28 VPFIVAHKKASLK--RLKSGAERISVSIDIHNQ-GTSTAYDVSLTDD 71 (155)
Q Consensus 28 ~a~LlvsK~i~~~--~~v~g~~~vtV~ytIYNv-G~s~A~dV~l~D~ 71 (155)
+..+++|.+-+.. .|.+| +.+++++.--.. |-.-|.+|.+.+.
T Consensus 30 g~DvFvH~s~i~~g~~l~~G-~~V~F~v~~~~k~G~~~A~~V~~~~~ 75 (79)
T 2ytv_A 30 SKKLFFHVKEVQDGIELQAG-DEVEFSVILNQRTGKCSACNVWRVSG 75 (79)
T ss_dssp SSSEEEETTTCCSSCCCCTT-CEEECBCEECSSSCCEECCSCEECSC
T ss_pred CCcEEEEhHHcCCCCcCCCC-CEEEEEEEECCCCCCceeEEEEECCC
Confidence 3789999877653 58888 777766554445 4436899999863
No 108
>1aoh_A Cellulosome-integrating protein CIPA; cellulosome subunit, B-barrel, cellulose degradation; 1.70A {Clostridium thermocellum} SCOP: b.2.2.2 PDB: 1anu_A
Probab=20.06 E-value=2.3e+02 Score=20.97 Aligned_cols=42 Identities=10% Similarity=0.257 Sum_probs=32.3
Q ss_pred cccccccCceeEEEEEEEEecCC--cceeeEEEecCCCCCCCceEecC
Q 031694 38 SLKRLKSGAERISVSIDIHNQGT--STAYDVSLTDDSWPQDKFDVISG 83 (155)
Q Consensus 38 ~~~~~v~g~~~vtV~ytIYNvG~--s~A~dV~l~D~sfp~~~F~~v~G 83 (155)
-.....+| ..++|-+++-|+-+ -...|..|. |.++.+|+++-
T Consensus 11 g~~~~~~G-dtv~VpV~~~~vp~~gI~s~~f~l~---YD~~~Lev~sV 54 (147)
T 1aoh_A 11 DTVNAKPG-DTVRIPVRFSGIPSKGIANCDFVYS---YDPNVLEIIEI 54 (147)
T ss_dssp CEEEECTT-CEEEEEEEEESCCTTCBSEEEEEEE---CCTTTEEEEEE
T ss_pred ccccccCC-CEEEEEEEEecCCccCeEEEEEEEE---ECchheEEEee
Confidence 34556788 99999999999975 355677765 88899988763
Done!