Query 031695
Match_columns 155
No_of_seqs 102 out of 216
Neff 5.3
Searched_HMMs 13730
Date Mon Mar 25 05:58:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031695.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/031695hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d3etja3 d.142.1.2 (A:79-276) N 11.3 36 0.0027 22.5 1.0 19 42-60 178-196 (198)
2 d2e74f1 f.23.25.1 (F:1-32) Pet 10.3 84 0.0061 16.2 2.0 12 80-91 16-27 (32)
3 d1u4na_ c.69.1.2 (A:) Carboxyl 5.8 1.6E+02 0.012 20.4 2.6 24 102-125 279-305 (308)
4 d1kjqa3 d.142.1.2 (A:113-318) 5.6 93 0.0067 20.4 1.0 18 42-59 185-202 (206)
5 d1wf9a1 d.15.1.1 (A:8-101) NPL 3.7 2.2E+02 0.016 18.2 1.7 19 41-59 22-40 (94)
6 d1iica1 d.108.1.2 (A:34-218) N 3.5 1.1E+02 0.0078 21.8 -0.0 9 102-110 4-12 (185)
7 d2oiea1 a.204.1.2 (A:21-122) X 3.4 1.8E+02 0.013 18.2 1.0 12 141-152 78-89 (102)
8 d1ofcx1 a.4.1.3 (X:799-850) SA 3.2 3.3E+02 0.024 15.2 2.1 13 118-130 6-18 (52)
9 d1t33a2 a.121.1.1 (A:89-220) P 3.1 4.8E+02 0.035 16.7 3.2 28 35-62 50-77 (132)
10 d2uuia1 f.56.1.1 (A:2-147) Leu 3.1 6.5E+02 0.047 16.3 4.9 24 117-140 50-73 (146)
No 1
>d3etja3 d.142.1.2 (A:79-276) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), domain 2 {Escherichia coli [TaxId: 562]}
Probab=11.34 E-value=36 Score=22.48 Aligned_cols=19 Identities=21% Similarity=0.373 Sum_probs=15.5
Q ss_pred hhhhhhhhhhhcCCCCChh
Q 031695 42 FHIFSKHVLSHTGVQVPDV 60 (155)
Q Consensus 42 ~~~~~~~~~~~~Glp~P~~ 60 (155)
++.++.|+.+.+|+|+|++
T Consensus 178 ~s~~e~~~ra~lglpl~~p 196 (198)
T d3etja3 178 ISQFELHLRAITDLPLPQP 196 (198)
T ss_dssp SCHHHHHHHHHTTCCCCCC
T ss_pred CCHHHHHHHHHcCCCCCCC
Confidence 3567889998999999875
No 2
>d2e74f1 f.23.25.1 (F:1-32) PetM subunit of the cytochrome b6f complex {Mastigocladus laminosus [TaxId: 83541]}
Probab=10.29 E-value=84 Score=16.21 Aligned_cols=12 Identities=33% Similarity=0.625 Sum_probs=7.9
Q ss_pred HHHhhHHHHHHH
Q 031695 80 FIFGSSFGAYLL 91 (155)
Q Consensus 80 ~i~G~~~gA~lL 91 (155)
+..|+.+||.+|
T Consensus 16 ifvgwglgalll 27 (32)
T d2e74f1 16 IFVGWGLGVLLL 27 (32)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHhHHHHHHh
Confidence 345677888665
No 3
>d1u4na_ c.69.1.2 (A:) Carboxylesterase {Alicyclobacillus acidocaldarius [TaxId: 405212]}
Probab=5.78 E-value=1.6e+02 Score=20.43 Aligned_cols=24 Identities=4% Similarity=-0.061 Sum_probs=14.9
Q ss_pred hcccCCCCh---hhhHHHHHHHHHHHH
Q 031695 102 LYDFYNYDA---DKKEFGQIFIKFTQV 125 (155)
Q Consensus 102 ~HdFWn~~~---~~~~~~~~~~~F~KN 125 (155)
-|.|+.+.. +..+..+++.+|+|.
T Consensus 279 ~Hgf~~~~~~~~~a~~~~~~~~~fl~~ 305 (308)
T d1u4na_ 279 IHGFAQFYSLSPGATKALVRIAEKLRD 305 (308)
T ss_dssp ETTGGGGTTTSHHHHHHHHHHHHHHHH
T ss_pred CEeCcccCCCCHHHHHHHHHHHHHHHH
Confidence 488877543 334555667777764
No 4
>d1kjqa3 d.142.1.2 (A:113-318) Glycinamide ribonucleotide transformylase PurT, domain 2 {Escherichia coli [TaxId: 562]}
Probab=5.59 E-value=93 Score=20.38 Aligned_cols=18 Identities=28% Similarity=0.410 Sum_probs=12.9
Q ss_pred hhhhhhhhhhhcCCCCCh
Q 031695 42 FHIFSKHVLSHTGVQVPD 59 (155)
Q Consensus 42 ~~~~~~~~~~~~Glp~P~ 59 (155)
++.++.++....|+|+|+
T Consensus 185 v~~~e~~ir~~~Glp~~~ 202 (206)
T d1kjqa3 185 LSEFALHVRAFLGLPVGG 202 (206)
T ss_dssp SCHHHHHHHHHTTCCCCC
T ss_pred CCHHHHHHHHHcCCCCCC
Confidence 355666777778888876
No 5
>d1wf9a1 d.15.1.1 (A:8-101) NPL4-like protein 1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=3.71 E-value=2.2e+02 Score=18.17 Aligned_cols=19 Identities=0% Similarity=0.114 Sum_probs=15.7
Q ss_pred hhhhhhhhhhhhcCCCCCh
Q 031695 41 KFHIFSKHVLSHTGVQVPD 59 (155)
Q Consensus 41 ~~~~~~~~~~~~~Glp~P~ 59 (155)
.+...++.|++.+++|++.
T Consensus 22 Tl~~LK~~Ie~~L~VPv~~ 40 (94)
T d1wf9a1 22 TVSQLKTLIQDQLQIPIHN 40 (94)
T ss_dssp BHHHHHHHHHHHSCCCTTT
T ss_pred cHHHHHHHHHHHhCCCccc
Confidence 3577889999999999875
No 6
>d1iica1 d.108.1.2 (A:34-218) N-myristoyl transferase, NMT {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=3.51 E-value=1.1e+02 Score=21.77 Aligned_cols=9 Identities=11% Similarity=0.187 Sum_probs=5.6
Q ss_pred hcccCCCCh
Q 031695 102 LYDFYNYDA 110 (155)
Q Consensus 102 ~HdFWn~~~ 110 (155)
-|.||+.|+
T Consensus 4 ~hkFW~tQP 12 (185)
T d1iica1 4 DHKFWRTQP 12 (185)
T ss_dssp CCTTGGGSS
T ss_pred cCCCcCcCC
Confidence 377787543
No 7
>d2oiea1 a.204.1.2 (A:21-122) XTP3-transactivated gene A protein homolog RS21-C6 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=3.41 E-value=1.8e+02 Score=18.21 Aligned_cols=12 Identities=33% Similarity=0.581 Sum_probs=7.7
Q ss_pred HHHHHHHHHhcc
Q 031695 141 MVFIYLFRIVNH 152 (155)
Q Consensus 141 ~~~~~~~~~~~~ 152 (155)
-|++|+.|+.|+
T Consensus 78 DVl~yl~~lA~~ 89 (102)
T d2oiea1 78 DVLIYLVALAAR 89 (102)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 466777776653
No 8
>d1ofcx1 a.4.1.3 (X:799-850) SANT domain of the nucleosome remodeling ATPase ISWI {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=3.17 E-value=3.3e+02 Score=15.19 Aligned_cols=13 Identities=15% Similarity=0.041 Sum_probs=8.7
Q ss_pred HHHHHHHHHHHHH
Q 031695 118 IFIKFTQVSTYEL 130 (155)
Q Consensus 118 ~~~~F~KNlal~G 130 (155)
++++|.+-+..-|
T Consensus 6 dF~~Fi~a~ekyG 18 (52)
T d1ofcx1 6 DFNQFIKANEKYG 18 (52)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHH
Confidence 4777887766554
No 9
>d1t33a2 a.121.1.1 (A:89-220) Putative transcriptional repressor YbiH {Salmonella typhimurium [TaxId: 90371]}
Probab=3.14 E-value=4.8e+02 Score=16.67 Aligned_cols=28 Identities=18% Similarity=0.371 Sum_probs=22.4
Q ss_pred hhccCchhhhhhhhhhhhcCCCCChhhH
Q 031695 35 AKSLEPKFHIFSKHVLSHTGVQVPDVEI 62 (155)
Q Consensus 35 ~~~l~P~~~~~~~~~~~~~Glp~P~~~~ 62 (155)
.+.+.|+.+.+.+-+++.+|.+.++..+
T Consensus 50 ~~~i~P~~~~l~~ll~~~~G~~~~d~~~ 77 (132)
T d1t33a2 50 EQVIDPLHTHLTRLVAAYTGCDANDTRM 77 (132)
T ss_dssp HHTHHHHHHHHHHHHHHHHTCCTTSHHH
T ss_pred HHHhhhHHHHHHHHHHHHHCcCCCCHHH
Confidence 3567888888899999999988887543
No 10
>d2uuia1 f.56.1.1 (A:2-147) Leukotriene C4 synthase {Human (Homo sapiens) [TaxId: 9606]}
Probab=3.11 E-value=6.5e+02 Score=16.26 Aligned_cols=24 Identities=4% Similarity=0.083 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 031695 117 QIFIKFTQVSTYELSLSFSCNFYT 140 (155)
Q Consensus 117 ~~~~~F~KNlal~GgLL~~~~~~~ 140 (155)
+..+|+.||+-++=.++..+.++.
T Consensus 50 RaH~N~~E~~P~fL~ll~l~~l~~ 73 (146)
T d2uuia1 50 RAQVNCSEYFPLFLATLWVAGIFF 73 (146)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHhhhHhhHHHHHHHHHHHHhcc
Confidence 445899999999877777776653
Done!