BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031699
(154 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZPV8|COAD_ARATH Phosphopantetheine adenylyltransferase OS=Arabidopsis thaliana
GN=COAD PE=1 SV=1
Length = 176
Score = 247 bits (631), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 113/133 (84%), Positives = 127/133 (95%)
Query: 12 NSNISPDNSYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELI 71
+S +SP NS+GAVVLGGTFDRLHDGHR+FLKA+AELARDRIVVGVCDGPMLT KQF+++I
Sbjct: 6 DSKMSPANSFGAVVLGGTFDRLHDGHRMFLKAAAELARDRIVVGVCDGPMLTKKQFSDMI 65
Query: 72 QPVDERMRNVEAYIKSIKPELVVQTEPITDPYGPSIVDENLEAIVVSKETLPGGLSVNKK 131
QP++ERMRNVE Y+KSIKPELVVQ EPITDPYGPSIVDENLEAIVVSKETLPGGLSVN+K
Sbjct: 66 QPIEERMRNVETYVKSIKPELVVQAEPITDPYGPSIVDENLEAIVVSKETLPGGLSVNRK 125
Query: 132 RADRGLSQLKVWV 144
RA+RGLSQLK+ V
Sbjct: 126 RAERGLSQLKIEV 138
>sp|P53332|COAD_YEAST Phosphopantetheine adenylyltransferase OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CAB4 PE=1 SV=1
Length = 305
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 79/126 (62%)
Query: 19 NSYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERM 78
N + LGGTFD +HDGH++ L S + R++ G+ +L NK++ ELI+P D R
Sbjct: 140 NKFHVTALGGTFDHIHDGHKILLSVSTFITSQRLICGITCDELLQNKKYKELIEPYDTRC 199
Query: 79 RNVEAYIKSIKPELVVQTEPITDPYGPSIVDENLEAIVVSKETLPGGLSVNKKRADRGLS 138
R+V +IK +KP+L V+ P+ D GP+ +E +VVS+ET+ G +VNK R ++G+S
Sbjct: 200 RHVHQFIKLLKPDLSVELVPLRDVCGPTGKVPEIECLVVSRETVSGAETVNKTRIEKGMS 259
Query: 139 QLKVWV 144
L V V
Sbjct: 260 PLAVHV 265
>sp|Q9DBL7|COASY_MOUSE Bifunctional coenzyme A synthase OS=Mus musculus GN=Coasy PE=1 SV=2
Length = 563
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 83/134 (61%)
Query: 10 VVNSNISPDNSYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAE 69
V S P Y +GGTFDRLH+ H++ L + LA++++VVGV D +L +K E
Sbjct: 179 VARSPRQPVRGYHRGAVGGTFDRLHNAHKVLLSVACVLAQEQLVVGVADKDLLKSKLLPE 238
Query: 70 LIQPVDERMRNVEAYIKSIKPELVVQTEPITDPYGPSIVDENLEAIVVSKETLPGGLSVN 129
L+QP ER+ ++ ++ IKP L + P+ DPYGP+ D LE +VVS+ET GG++VN
Sbjct: 239 LLQPYAERVEHLTEFLVDIKPSLTFELVPLLDPYGPAGSDPTLEFLVVSEETYRGGMAVN 298
Query: 130 KKRADRGLSQLKVW 143
+ R + G +L ++
Sbjct: 299 RFRLENGKEELALY 312
>sp|Q8MIR4|COASY_PIG Bifunctional coenzyme A synthase OS=Sus scrofa GN=COASY PE=1 SV=1
Length = 562
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 84/134 (62%)
Query: 10 VVNSNISPDNSYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAE 69
V S P + +GGTFDRLH+ H++ L + LA++++VVGV D +L +K E
Sbjct: 179 VARSAKQPVRGHQRGAVGGTFDRLHNAHKVLLSVACILAQEQLVVGVADKDLLKSKLLPE 238
Query: 70 LIQPVDERMRNVEAYIKSIKPELVVQTEPITDPYGPSIVDENLEAIVVSKETLPGGLSVN 129
L+QP ER+ ++ ++ IKP L P+ DPYGP+ D +LE +VVS+ET GG++VN
Sbjct: 239 LLQPYTERVEHLSEFLVDIKPSLSFDLIPLLDPYGPAGSDPSLEFLVVSEETYRGGMAVN 298
Query: 130 KKRADRGLSQLKVW 143
+ R + GL +L ++
Sbjct: 299 RFRLENGLEELTLY 312
>sp|Q13057|COASY_HUMAN Bifunctional coenzyme A synthase OS=Homo sapiens GN=COASY PE=1 SV=4
Length = 564
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 83/134 (61%)
Query: 10 VVNSNISPDNSYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAE 69
V S P Y +GGTFDRLH+ H++ L + LA++++VVGV D +L +K E
Sbjct: 180 VAGSPKQPVRGYYRGAVGGTFDRLHNAHKVLLSVACILAQEQLVVGVADKDLLKSKLLPE 239
Query: 70 LIQPVDERMRNVEAYIKSIKPELVVQTEPITDPYGPSIVDENLEAIVVSKETLPGGLSVN 129
L+QP ER+ ++ ++ IKP L P+ DPYGP+ D +LE +VVS+ET GG+++N
Sbjct: 240 LLQPYTERVEHLSEFLVDIKPSLTFDVIPLLDPYGPAGSDPSLEFLVVSEETYRGGMAIN 299
Query: 130 KKRADRGLSQLKVW 143
+ R + L +L ++
Sbjct: 300 RFRLENDLEELALY 313
>sp|Q8ZY96|COAD_PYRAE Phosphopantetheine adenylyltransferase OS=Pyrobaculum aerophilum
(strain ATCC 51768 / IM2 / DSM 7523 / JCM 9630 / NBRC
100827) GN=coaD PE=3 SV=1
Length = 155
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 74/122 (60%), Gaps = 4/122 (3%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVC-DGPMLTNKQFAELIQPVDERMRNVE 82
VVLGGTFD LH GH + L A+A L DRI++G+ D T KQ+ ++P R+ N+
Sbjct: 8 VVLGGTFDTLHSGH-VKLLATATLIGDRILIGLTSDSFASTYKQYK--VRPFSVRLANLR 64
Query: 83 AYIKSIKPELVVQTEPITDPYGPSIVDENLEAIVVSKETLPGGLSVNKKRADRGLSQLKV 142
+ I PE V I DPYGP++ D LEAIV S ET P L +N +RA RGL ++V
Sbjct: 65 NLMSLIAPEREVAYVEIHDPYGPAVFDPRLEAIVASIETAPRALQINDERAKRGLRPMEV 124
Query: 143 WV 144
++
Sbjct: 125 FI 126
>sp|Q10350|YDA8_SCHPO Uncharacterized protein C1F12.08 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC1F12.08 PE=4 SV=2
Length = 316
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 75/127 (59%)
Query: 26 LGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYI 85
+GGTFD LH GH++ L +A ++VGV +L K E ++ + +R V ++
Sbjct: 161 VGGTFDHLHVGHKVLLTLTAWFGVKEVIVGVSGDELLKKKVQKEFLENIQKRKEEVSNFL 220
Query: 86 KSIKPELVVQTEPITDPYGPSIVDENLEAIVVSKETLPGGLSVNKKRADRGLSQLKVWVP 145
SIK ++ + I DP+GP+I D +++++VS+ET G +V ++R RGL +L ++
Sbjct: 221 HSIKEDINCRVVTIHDPFGPTITDAEIDSLIVSEETKTGATAVQEERVKRGLPELSIYCI 280
Query: 146 VLVVPSK 152
L+ P++
Sbjct: 281 DLLYPAQ 287
>sp|Q8TGY4|COAD_METKA Phosphopantetheine adenylyltransferase OS=Methanopyrus kandleri
(strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938)
GN=coaD PE=3 SV=1
Length = 157
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 76/130 (58%), Gaps = 2/130 (1%)
Query: 15 ISPDNSYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPV 74
++P + VV+GGTFDRLH GH+ L + EL DR+V+GV + ++ + ++P
Sbjct: 1 MTPLARFRKVVVGGTFDRLHLGHQRLLSVALELG-DRVVIGVTTDSFV-REEGKKGVEPF 58
Query: 75 DERMRNVEAYIKSIKPELVVQTEPITDPYGPSIVDENLEAIVVSKETLPGGLSVNKKRAD 134
+ER+R V +++ V+ P+ D YG ++ D+ ++AIVVS ET P L +N+ R
Sbjct: 59 EERVRAVRRFVEEKGASDRVEIVPLEDRYGTTLEDDEMDAIVVSPETEPVALEINELRRK 118
Query: 135 RGLSQLKVWV 144
RG L + V
Sbjct: 119 RGFPPLSIVV 128
>sp|O27918|COAD_METTH Phosphopantetheine adenylyltransferase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=coaD PE=3 SV=2
Length = 164
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Query: 21 YGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRN 80
Y V +GGTFDR H GHR L + + + +++GV K E I+P RM+N
Sbjct: 5 YSLVAVGGTFDRFHKGHRRLLDEAFRVG-ETVMIGVTSDEFAAAK--GEGIEPCSVRMKN 61
Query: 81 VEAYIKSIKPELVVQTEPITDPYGPSIVDENLEAIVVSKETLPGGLSVNKKRADRGLSQL 140
+E Y++ + V + DPYG ++ DE EAIVVS+ET P +N R +RG +L
Sbjct: 62 LEEYLRDKDADYHVMR--LDDPYGTTVTDEAFEAIVVSRETEPVAREINAIRRNRGFREL 119
Query: 141 KV 142
+
Sbjct: 120 DI 121
>sp|C5A3G3|COAD_THEGJ Phosphopantetheine adenylyltransferase OS=Thermococcus
gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)
GN=coaD PE=3 SV=1
Length = 159
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 77/132 (58%), Gaps = 3/132 (2%)
Query: 21 YGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRN 80
Y VV+GGTFDRLH GH+ L+ + E+ R + VG+ M+ NK +AE I P + R+ +
Sbjct: 5 YRKVVVGGTFDRLHLGHKALLRKAFEVGR-YVYVGLTSDEMIRNKPYAEKILPYELRLMD 63
Query: 81 VEAYIKSIKPELVVQTEPITDPYGPSIVDENLEAIVVSKETLPGGLSVNKKRADRGLSQL 140
+ + + + + I G + ++LEAIVVS+ET G L VN+ R +RGL L
Sbjct: 64 LLKFFE-VNGYTNYRIIKINTAIGFADRIKSLEAIVVSEETYKGALLVNRAREERGLKPL 122
Query: 141 KVWVPVLVVPSK 152
++ V + +V S+
Sbjct: 123 EI-VTIKLVKSR 133
>sp|Q5JHE8|COAD_PYRKO Phosphopantetheine adenylyltransferase OS=Pyrococcus kodakaraensis
(strain ATCC BAA-918 / JCM 12380 / KOD1) GN=coaD PE=3
SV=1
Length = 165
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 76/128 (59%), Gaps = 3/128 (2%)
Query: 21 YGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRN 80
Y VV+GGTFDRLH GH+ L+ + E+ + + +G+ M+ NK +AE I P + R+++
Sbjct: 5 YRKVVVGGTFDRLHLGHKALLRKAFEVGKI-VYIGLTSDEMVRNKPYAERILPYEHRLKD 63
Query: 81 VEAYIKSIKPELVVQTEPITDPYGPSIVDENLEAIVVSKETLPGGLSVNKKRADRGLSQL 140
+ +I+ + + I G + ++LEAIVVS+ET G L VN+ R ++GL L
Sbjct: 64 LLKFIE-VNGYTNYRIIKIHTAIGFADSMKSLEAIVVSEETYKGALIVNRAREEKGLKPL 122
Query: 141 K-VWVPVL 147
V +P++
Sbjct: 123 DIVTIPII 130
>sp|Q9UYT0|COAD_PYRAB Phosphopantetheine adenylyltransferase OS=Pyrococcus abyssi (strain
GE5 / Orsay) GN=coaD PE=1 SV=3
Length = 157
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 76/127 (59%), Gaps = 6/127 (4%)
Query: 20 SYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMR 79
+ VV+GGTFDRLH GH+ L+ + E+ + + +G+ M+ NK +AE I P + R++
Sbjct: 3 KFKKVVVGGTFDRLHLGHKALLRKAFEVGKI-VYIGLTSDDMVKNKPYAEKILPYERRLK 61
Query: 80 NVEAYIK--SIKPELVVQTEPITDPYGPSIVDENLEAIVVSKETLPGGLSVNKKRADRGL 137
++ +++ + + +++ I + G + +LEAIVVS+ET G L VN+ R + GL
Sbjct: 62 DLIEFLEVNNFRRYRIIK---INNAIGFTTRIRSLEAIVVSEETYKGALLVNRAREEVGL 118
Query: 138 SQLKVWV 144
L++ V
Sbjct: 119 RPLEIIV 125
>sp|O58358|COAD_PYRHO Phosphopantetheine adenylyltransferase OS=Pyrococcus horikoshii
(strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139
/ OT-3) GN=coaD PE=3 SV=2
Length = 158
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 75/126 (59%), Gaps = 6/126 (4%)
Query: 21 YGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRN 80
+ VV+GGTFDRLH GH+ L+ + E+ + + +G+ M+ K +AE I P + R+++
Sbjct: 4 FKKVVVGGTFDRLHLGHKALLRKAFEVGKI-VYIGLTSDEMVKEKPYAEKILPYERRLKD 62
Query: 81 VEAYIK--SIKPELVVQTEPITDPYGPSIVDENLEAIVVSKETLPGGLSVNKKRADRGLS 138
+ +++ + K +++ I + G + +LEAIVVS+ET G L VN+ R + GL
Sbjct: 63 LIEFLEVNNFKGYRIIK---INNAIGFTTEIRSLEAIVVSEETYKGALIVNRAREEVGLK 119
Query: 139 QLKVWV 144
L++ V
Sbjct: 120 PLEIIV 125
>sp|Q58436|COAD_METJA Phosphopantetheine adenylyltransferase OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=coaD PE=3 SV=1
Length = 147
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 71/131 (54%), Gaps = 8/131 (6%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEA 83
VV+GGTFD LH GH+ LK ++ L ++ +G+ K I + R+ N++
Sbjct: 3 VVVGGTFDILHRGHKELLKFASSLG--KLTIGITSDE-FAKKYKTHKINDLKTRIENLKK 59
Query: 84 YIKSIKPELVVQTEPITDPYGPSIVDENLEAIVVSKETLPGGLSVNKKRADRGLSQLK-- 141
++ SIK + ++ I D YG +I E+ + IVV++ETL +NK R +GL LK
Sbjct: 60 FLDSIKADYEIKV--INDAYGDAIT-EDYDIIVVTQETLKNAEKINKIRESKGLKPLKIV 116
Query: 142 VWVPVLVVPSK 152
++ P+L K
Sbjct: 117 IFKPILAEDGK 127
>sp|Q8U1X0|COAD_PYRFU Phosphopantetheine adenylyltransferase OS=Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=coaD
PE=3 SV=1
Length = 160
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 27 GGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIK 86
GGTFDRLH GH+ L+ + E+ + + +G+ M+ KQ++E I P ++R+ ++ +++
Sbjct: 11 GGTFDRLHLGHKALLRKAFEVG-EIVYIGLTSDEMIKEKQYSERILPYEKRLLDLIKFLE 69
Query: 87 SIKPELVVQTEPITDPYGPSIVDENLEAIVVSKETLPGGLSVNKKRADRGLSQLKVWV 144
+ + I + G + ++LEAIVVS+ET G + VNK R + GL L + V
Sbjct: 70 -VNKYRNYRIMKIHNAIGFTTKIKSLEAIVVSEETYKGAVLVNKAREELGLRPLDIVV 126
>sp|Q46A30|COAD_METBF Phosphopantetheine adenylyltransferase OS=Methanosarcina barkeri
(strain Fusaro / DSM 804) GN=coaD PE=3 SV=1
Length = 161
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 68/121 (56%), Gaps = 6/121 (4%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAELARD-RIVVGVCDGPMLTNKQFAELIQPVDERMRNVE 82
V +GGTF HDGH ++ + E+A D ++ +G+ ML+ + + ++R +
Sbjct: 4 VAVGGTFQYFHDGHAKLIEKAFEIAEDGKVHIGLTSDEMLSK---SHSVDNYEKRRNWLL 60
Query: 83 AYIKSIK-PELVVQTEPITDPYGPSIVDENLEAIVVSKETLPGGLSVNKKRADRGLSQLK 141
YIK + P+ + + DPYGP++ +E+ + I+VS ET P L +N+ R ++G L+
Sbjct: 61 QYIKEMGIPDDRYEITKLNDPYGPAL-EEDFDYIIVSPETYPVALKMNRIREEKGKKLLE 119
Query: 142 V 142
+
Sbjct: 120 I 120
>sp|Q8TK70|COAD_METAC Phosphopantetheine adenylyltransferase OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=coaD PE=3 SV=1
Length = 156
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 69/121 (57%), Gaps = 6/121 (4%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAELARD-RIVVGVCDGPMLTNKQFAELIQPVDERMRNVE 82
V +GGTF LHDGH ++ + E+A D ++ +G+ ML + + + R+R +E
Sbjct: 4 VAVGGTFQYLHDGHARLIEKAFEIAGDGKVYIGLTSDEMLQKNHSIDNYE--NRRVRLLE 61
Query: 83 AYIKSIK-PELVVQTEPITDPYGPSIVDENLEAIVVSKETLPGGLSVNKKRADRGLSQLK 141
YI ++ P+ + + DP GP+ V+E+ + IVVS ET P L +N+ R +G + L+
Sbjct: 62 -YIDEMEIPKEKYEITRLNDPCGPT-VEEDFDYIVVSPETYPVALKINRIREKKGKNPLE 119
Query: 142 V 142
+
Sbjct: 120 I 120
>sp|Q97BQ0|COPP_THEVO Bifunctional phosphopantetheine adenylyltransferase/NTP phosphatase
OS=Thermoplasma volcanium (strain ATCC 51530 / DSM 4299
/ JCM 9571 / NBRC 15438 / GSS1) GN=coaD PE=3 SV=1
Length = 328
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 63/120 (52%), Gaps = 6/120 (5%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVC-DGPMLTNKQFAELIQPVDERMRNVE 82
V+GGTF +LH GH+ L+ + E + IV+G+ D + NK + + P ER RN+
Sbjct: 3 TVVGGTFSKLHKGHKALLEKAIETG-NEIVIGLTSDEYVKRNKVYPAI--PYKERYRNLY 59
Query: 83 AYIKSIKPELVVQTEPITDPYGPSIVDENLEAIVVSKETLPGGLSVNKKRADRGLSQLKV 142
Y+ +K + PI D G + + + E IVVS ET L +N+ R GL LK+
Sbjct: 60 NYM--VKKTNKFRIRPIDDRNGNAPYERDYEIIVVSPETYQRSLKINEIRIQNGLPPLKI 117
>sp|O28077|COAD_ARCFU Phosphopantetheine adenylyltransferase OS=Archaeoglobus fulgidus
(strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC
100126) GN=coaD PE=1 SV=1
Length = 148
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 65/122 (53%), Gaps = 10/122 (8%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEA 83
V LGGTF+ LH+GH+ + + +L I +GV M + + L P R NV+
Sbjct: 3 VALGGTFEPLHEGHKKLIDVAIKLGGRDITIGVTSDRMARARIRSVL--PFAIRAENVKR 60
Query: 84 YI---KSIKPELVVQTEPITDPYGPSIVDENLEAIVVSKETLPGGLSVNKKRADRGLSQL 140
Y+ +PE+V IT+PYG ++ D + E +VVS ET L +N+KR + G ++
Sbjct: 61 YVMRKYGFEPEIV----KITNPYGKTL-DVDFEYLVVSPETYEMALKINQKREELGKRKI 115
Query: 141 KV 142
+
Sbjct: 116 TI 117
>sp|Q8PZN4|COAD_METMA Phosphopantetheine adenylyltransferase OS=Methanosarcina mazei
(strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833
/ OCM 88) GN=coaD PE=3 SV=1
Length = 154
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 64/121 (52%), Gaps = 6/121 (4%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAELA-RDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVE 82
V +GGTF LHDGH ++ + E+A ++ +G+ ML E + R R +E
Sbjct: 4 VAVGGTFQYLHDGHARLIEKAFEIAGSGKVYIGLTSDEMLQKNHSVESYKI--RRSRLLE 61
Query: 83 AYIKSIK-PELVVQTEPITDPYGPSIVDENLEAIVVSKETLPGGLSVNKKRADRGLSQLK 141
YIK + PE + + DP GP+I +E+ + I+VS ET P L +N R +G L+
Sbjct: 62 -YIKKMGVPEEKYEVTRLNDPCGPTI-EEDFDHIIVSPETYPVALKINTIREKKGKKPLE 119
Query: 142 V 142
+
Sbjct: 120 I 120
>sp|Q9HIY2|COPP_THEAC Bifunctional phosphopantetheine adenylyltransferase/NTP phosphatase
OS=Thermoplasma acidophilum (strain ATCC 25905 / DSM
1728 / JCM 9062 / NBRC 15155 / AMRC-C165) GN=coaD PE=3
SV=1
Length = 328
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 4/119 (3%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEA 83
V+GGTF +LH GH+ L + + + ++ D + NK + + P R R +
Sbjct: 3 TVVGGTFSKLHKGHKALLNTAIDTGNEVVIGLTSDEYVKKNKVYPAI--PYSVRYRTLYN 60
Query: 84 YIKSIKPELVVQTEPITDPYGPSIVDENLEAIVVSKETLPGGLSVNKKRADRGLSQLKV 142
Y+ IK + I D G + +++ E IVVS ET P L +N+ R GL LK+
Sbjct: 61 YM--IKRTNKFRIRQIDDRNGNAPYEKDYEVIVVSPETYPRSLKINEIRISNGLPPLKI 117
>sp|C5A1S7|RIBL_THEGJ FAD synthase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM
11827 / EJ3) GN=ribL PE=3 SV=1
Length = 151
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 54/114 (47%), Gaps = 14/114 (12%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDER------ 77
V++GG FD LH GH FLK + EL + +V+ D + NK+ I P ++R
Sbjct: 12 VLVGGVFDILHVGHVHFLKQAKELGDELVVIVAHDETVRRNKR-RNPINPAEDRAELLRA 70
Query: 78 MRNV-EAYIKS---IKPELVVQTEPITDPYGPSIVDENLEAIVVSKETLPGGLS 127
+R V E YI S I ELV + P GP D+N + +E G+
Sbjct: 71 IRYVDEVYIGSPGGIDFELVRRINPDVIAIGP---DQNFNCEKLKEELKRHGIE 121
>sp|Q5JHT4|RIBL_PYRKO FAD synthase OS=Pyrococcus kodakaraensis (strain ATCC BAA-918 / JCM
12380 / KOD1) GN=ribL PE=3 SV=1
Length = 149
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDER------ 77
V++GG FD LH GH FLK + EL D +VV V + ++ E I P ++R
Sbjct: 10 VLVGGVFDILHVGHIHFLKQAKELG-DELVVIVAHDETVRMQKRREPINPAEDRAELLRA 68
Query: 78 MRNV-EAYI---KSIKPELVVQTEPITDPYGPS 106
+R V E YI +I ELV + +P GP
Sbjct: 69 IRYVDEVYIGTPGTIDMELVKRIDPDVIAIGPD 101
>sp|E3GWN9|RIBL_METFV FAD synthase OS=Methanothermus fervidus (strain ATCC 43054 / DSM
2088 / JCM 10308 / V24 S) GN=ribL PE=3 SV=1
Length = 145
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 18/84 (21%)
Query: 28 GTFDRLHDGHRLFLKASAEL-----------ARDRIVVGVCDGPMLTNKQFAE---LIQP 73
GTFD +H GH +LK + EL ARD V P++ KQ E +++P
Sbjct: 4 GTFDIIHPGHGFYLKKAKELGGKNSKLVVIVARDSTVRARKRKPVINEKQRLEVVKMLKP 63
Query: 74 VDERMRNVEAYI----KSIKPELV 93
VDE E I + IKP+++
Sbjct: 64 VDEAYLGCEGDIFKTVEKIKPDII 87
>sp|Q9UZ37|RIBL_PYRAB FAD synthase OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=ribL PE=3
SV=1
Length = 148
Score = 36.6 bits (83), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 14/121 (11%)
Query: 19 NSYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERM 78
N VV+GG FD LH GH FLK + EL D ++V V + ++ I P ++R
Sbjct: 4 NRRIRVVVGGVFDILHVGHIHFLKMAKELG-DELIVIVAHDETVKKRKGRPPINPAEDRA 62
Query: 79 RNVEA--YIK--------SIKPELVVQTEPITDPYGPSIVDENLEAIVVSKETLPGGLSV 128
+ A Y+ I EL+ + +P GP D++ + + ++ GL V
Sbjct: 63 EVLRAIRYVDDVVIGEPGEISLELIKKLKPDVIALGP---DQDFDCRTLKEKLRSIGLKV 119
Query: 129 N 129
Sbjct: 120 E 120
>sp|B6ELZ7|HLDE_ALISL Bifunctional protein HldE OS=Aliivibrio salmonicida (strain
LFI1238) GN=hldE PE=3 SV=1
Length = 476
Score = 36.6 bits (83), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 14/84 (16%)
Query: 3 MAILDESVVNSNISPDNSYG--AVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGP 60
I++E ++ S + G V+ G FD LH GH +L +AEL DR++V V
Sbjct: 320 FGIINEELLISAVKQARERGEKVVMTNGCFDILHAGHVYYLNHAAELG-DRLIVAVN--- 375
Query: 61 MLTNKQFAEL------IQPVDERM 78
TN+ L I P D RM
Sbjct: 376 --TNESVQRLKGPGRPINPTDRRM 397
>sp|B8GJN8|RIBL_METPE FAD synthase OS=Methanosphaerula palustris (strain ATCC BAA-1556 /
DSM 19958 / E1-9c) GN=ribL PE=3 SV=1
Length = 153
Score = 36.6 bits (83), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 58/113 (51%), Gaps = 16/113 (14%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCD-------GPMLTNKQFAELI---QP 73
+V GTFD LH GH +L+ S +L + V+ D P++ +Q +++ +P
Sbjct: 4 IVATGTFDLLHPGHLFYLQESKKLGDELYVIVARDRNVKHKPRPIIPEEQRLQMVAALKP 63
Query: 74 VDERM----RNVEAYIKSIKPELVVQTEPITDPYGPSIVDENLEAIVVSKETL 122
VD + ++ I++I+P+++ T + P+++ E L+A +S E +
Sbjct: 64 VDHALLGDTTDMFRPIEAIRPDVI--TLGFNQNFDPAVLTEALKARSLSAEVV 114
>sp|Q493X3|HLDE_BLOPB Bifunctional protein HldE OS=Blochmannia pennsylvanicus (strain
BPEN) GN=hldE PE=3 SV=1
Length = 477
Score = 36.6 bits (83), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 3 MAILDESVVNSNISPDNSYGA--VVLGGTFDRLHDGHRLFLKASAELARDRIVVGV-CDG 59
+ ILDE + IS + G V+ G FD LH GH +L + +L DR++V V DG
Sbjct: 322 VGILDEKTLKQTISVVRNRGEKIVMTNGVFDILHSGHVSYLTNAKKLG-DRLIVAVNSDG 380
Query: 60 PMLTNKQFAELIQPVDERM 78
K I +++RM
Sbjct: 381 STRRLKGKTRPINTLEQRM 399
>sp|Q3IHX7|HLDE_PSEHT Bifunctional protein HldE OS=Pseudoalteromonas haloplanktis (strain
TAC 125) GN=hldE PE=3 SV=1
Length = 479
Score = 36.2 bits (82), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 6 LDESVVNSNISPDNSYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNK 65
D+ + + + N V G FD LH GH +L A A+ DR+VVG+ + ++
Sbjct: 327 FDDVLQHIEFAKQNGETIVFTNGCFDILHAGHVRYL-AQAKARGDRLVVGLNNDASISRL 385
Query: 66 QFAEL-IQPVDER 77
+ A+ I P+DER
Sbjct: 386 KGADRPINPLDER 398
>sp|O58466|RIBL_PYRHO FAD synthase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM
12428 / JCM 9974 / NBRC 100139 / OT-3) GN=ribL PE=3
SV=1
Length = 148
Score = 36.2 bits (82), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEA 83
VV+GG FD +H GH FLK + EL D ++V V + ++ I P ++R ++A
Sbjct: 9 VVVGGVFDIIHAGHVHFLKMAKELG-DELIVIVAHDETVKKRKGRPPINPAEDRAEVLKA 67
>sp|Q8TXT2|RIBL_METKA FAD synthase OS=Methanopyrus kandleri (strain AV19 / DSM 6324 /
JCM 9639 / NBRC 100938) GN=ribL PE=3 SV=1
Length = 150
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 18/89 (20%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAEL-----------ARDRIVVGVCDGPMLTNKQFAELI- 71
V+ GG FD LH GH FL+ + ++ ARD V + P++ +Q ++
Sbjct: 5 VLAGGVFDILHPGHVAFLEEARKIAGKNGELVVVVARDETVRRLKRTPIVPEEQRVRMVS 64
Query: 72 --QPVDERM----RNVEAYIKSIKPELVV 94
+PVD + R+ +K++KP++VV
Sbjct: 65 ALKPVDRAILGHPRDFSITLKTVKPDVVV 93
>sp|Q07Y78|HLDE_SHEFN Bifunctional protein HldE OS=Shewanella frigidimarina (strain NCIMB
400) GN=hldE PE=3 SV=1
Length = 476
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTN-KQFAELIQPVDERM 78
V+ G FD LH GH +L+ + L DR++V V D +T K + PVD RM
Sbjct: 344 VMTNGCFDILHAGHVSYLQQAKALG-DRLIVAVNDDSSVTRLKGPGRPVNPVDRRM 398
>sp|D5VUB0|RIBL_METIM FAD synthase OS=Methanocaldococcus infernus (strain DSM 11812 /
JCM 15783 / ME) GN=ribL PE=3 SV=1
Length = 145
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 16/87 (18%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCD---------GPMLTNKQ---FAELI 71
VV GTFD LH GH FLK + L + IV+ D P++ +Q E +
Sbjct: 4 VVAAGTFDILHPGHYEFLKFAKSLGDELIVIVARDKTVEKIKGRKPIIPEEQRRAMVEAL 63
Query: 72 QPVDE----RMRNVEAYIKSIKPELVV 94
+PVD+ + N I +KP+++V
Sbjct: 64 KPVDKAILGSLNNKLEPIIELKPDIIV 90
>sp|Q9HUG9|HLDE_PSEAE Bifunctional protein HldE OS=Pseudomonas aeruginosa (strain ATCC
15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=hldE PE=3
SV=1
Length = 474
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTN-KQFAELIQPVDERM 78
V G FD LH GH +L+ A DR++VGV D +T K I VD RM
Sbjct: 342 VFTNGCFDILHAGHVTYLE-QARAQGDRLIVGVNDDASVTRLKGVGRPINSVDRRM 396
>sp|B7V388|HLDE_PSEA8 Bifunctional protein HldE OS=Pseudomonas aeruginosa (strain LESB58)
GN=hldE PE=3 SV=1
Length = 473
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTN-KQFAELIQPVDERM 78
V G FD LH GH +L+ A DR++VGV D +T K I VD RM
Sbjct: 342 VFTNGCFDILHAGHVTYLE-QARAQGDRLIVGVNDDASVTRLKGVGRPINSVDRRM 396
>sp|C6A439|RIBL_THESM FAD synthase OS=Thermococcus sibiricus (strain MM 739 / DSM
12597) GN=ribL PE=3 SV=1
Length = 148
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 21/35 (60%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCD 58
VV GG FD LH GH FLK + EL + +V+ D
Sbjct: 9 VVTGGVFDILHVGHIHFLKQAKELGDELVVIVAHD 43
>sp|Q02F21|HLDE_PSEAB Bifunctional protein HldE OS=Pseudomonas aeruginosa (strain
UCBPP-PA14) GN=hldE PE=3 SV=1
Length = 474
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTN-KQFAELIQPVDERM 78
V G FD LH GH +L+ A DR++VGV D +T K I VD RM
Sbjct: 342 VFTNGCFDILHAGHVTYLE-QARAQGDRLIVGVNDDASVTRLKGVGRPINSVDRRM 396
>sp|A4SGY4|NADD_PROVI Probable nicotinate-nucleotide adenylyltransferase
OS=Prosthecochloris vibrioformis (strain DSM 265)
GN=nadD PE=3 SV=1
Length = 193
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 25 VLGGTFDRLHDGH-RLFLKASAELARDRIVVGVCDGPM 61
VLGGTFD H+GH L L A L DR+++ V D P+
Sbjct: 5 VLGGTFDPPHNGHLALALFARELLCVDRLILSVSDNPL 42
>sp|Q5E2L7|HLDE_VIBF1 Bifunctional protein HldE OS=Vibrio fischeri (strain ATCC 700601 /
ES114) GN=hldE PE=3 SV=1
Length = 476
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 12/61 (19%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAEL------IQPVDER 77
V+ G FD LH GH +L +AEL DR++V V TN+ L I P D R
Sbjct: 343 VMTNGCFDILHAGHVSYLNHAAELG-DRLIVAVN-----TNESVQRLKGPGRPINPTDRR 396
Query: 78 M 78
M
Sbjct: 397 M 397
>sp|B5FB67|HLDE_VIBFM Bifunctional protein HldE OS=Vibrio fischeri (strain MJ11) GN=hldE
PE=3 SV=1
Length = 476
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 12/61 (19%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAEL------IQPVDER 77
V+ G FD LH GH +L +AEL DR++V V TN+ L I P D R
Sbjct: 343 VMTNGCFDILHAGHVSYLNHAAELG-DRLIVAVN-----TNESVQRLKGPGRPINPTDRR 396
Query: 78 M 78
M
Sbjct: 397 M 397
>sp|Q12YR1|RIBL_METBU FAD synthase OS=Methanococcoides burtonii (strain DSM 6242)
GN=ribL PE=3 SV=1
Length = 143
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEA 83
V+ GTFD LH GH FL+ + D + V V M+ +K A+ I P +R++ + A
Sbjct: 4 VLATGTFDLLHPGHVFFLRQARSFG-DELYVLVARDSMIKHK--AQPIVPEGQRLKMISA 60
Query: 84 Y 84
+
Sbjct: 61 F 61
>sp|A6VDB5|HLDE_PSEA7 Bifunctional protein HldE OS=Pseudomonas aeruginosa (strain PA7)
GN=hldE PE=3 SV=1
Length = 474
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTN-KQFAELIQPVDERM 78
V G FD LH GH +L+ A DR++VGV D +T K I VD RM
Sbjct: 342 VFTNGCFDILHAGHVTYLE-QARAQGDRLIVGVNDDASVTRLKGAGRPINSVDRRM 396
>sp|A6UWK8|RIBL_META3 FAD synthase OS=Methanococcus aeolicus (strain Nankai-3 / ATCC
BAA-1280) GN=ribL PE=3 SV=1
Length = 156
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 18/94 (19%)
Query: 18 DNSYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDG------------PMLTNK 65
D + V+ GTFD LH GH LK + L + IVV D P +
Sbjct: 5 DKTKKIVLTAGTFDLLHPGHHNTLKYAKSLGDELIVVIARDETVKKIKGRKPVIPENQRR 64
Query: 66 QFAELIQPVDERM-----RNVEAYIKSIKPELVV 94
+ E I+PVD+ + +E +K IKP+++V
Sbjct: 65 EMIEAIKPVDKAILGSLTDKLEPILK-IKPDIIV 97
>sp|A7MWN3|HLDE_VIBHB Bifunctional protein HldE OS=Vibrio harveyi (strain ATCC BAA-1116 /
BB120) GN=hldE PE=3 SV=1
Length = 476
Score = 34.7 bits (78), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGV-CDGPMLTNKQFAELIQPVDERM 78
V+ G FD LH GH +L +AEL DR++V V D + K + P D RM
Sbjct: 343 VMTNGCFDILHAGHVSYLNHAAELG-DRLIVAVNTDESVKRLKGPGRPVNPTDRRM 397
>sp|A0B7A6|RIBL_METTP FAD synthase OS=Methanosaeta thermophila (strain DSM 6194 / PT)
GN=ribL PE=3 SV=1
Length = 143
Score = 34.7 bits (78), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEA 83
V+ GTFD LH GH L+L+ S L + +VV D + K + P D+R+R V A
Sbjct: 8 VMATGTFDILHPGHLLYLERSRALGDELVVVVARD---INVKHKPRPVVPEDQRLRMVSA 64
>sp|D9PX81|RIBL_METTM FAD synthase OS=Methanothermobacter marburgensis (strain DSM 2133 /
14651 / NBRC 100331 / OCM 82 / Marburg) GN=ribL PE=3
SV=1
Length = 161
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 54/126 (42%), Gaps = 25/126 (19%)
Query: 23 AVVLGGTFDRLHDGHRLFLKASAE-----------LARDRIVVGVCDGPMLTNKQFAE-- 69
V+ GTFD +H GH FL+ + + LARD V P++ KQ E
Sbjct: 13 TVMATGTFDIIHPGHGFFLEEAKKLGGENARLVVVLARDSTVRARKRTPIIGEKQRLEVV 72
Query: 70 -LIQPVDERMRNVEAYIKSIKP--ELVVQTEPITDPYGPSIVDENLEAIVVSKETLPGGL 126
+++PVD EAY+ S E+V + +P GP D+ + + E GL
Sbjct: 73 MMLKPVD------EAYLGSETDMFEIVHRLKPDIIAIGP---DQKFDIDELRDELRRRGL 123
Query: 127 SVNKKR 132
KR
Sbjct: 124 ECEVKR 129
>sp|Q87SJ9|HLDE_VIBPA Bifunctional protein HldE OS=Vibrio parahaemolyticus serotype O3:K6
(strain RIMD 2210633) GN=hldE PE=3 SV=1
Length = 476
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGV-CDGPMLTNKQFAELIQPVDERM 78
V+ G FD LH GH +L +AEL DR++V V D + K + P D RM
Sbjct: 343 VMTNGCFDILHAGHVSYLNHAAELG-DRLIVAVNTDESVKRLKGPGRPVNPTDRRM 397
>sp|Q3B146|NADD_PELLD Probable nicotinate-nucleotide adenylyltransferase OS=Pelodictyon
luteolum (strain DSM 273) GN=nadD PE=3 SV=1
Length = 194
Score = 34.3 bits (77), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 24 VVLGGTFDRLHDGH-RLFLKASAELARDRIVVGVCDGPM 61
V GGTFD H+GH + L A L DRI++ V D P+
Sbjct: 4 AVFGGTFDPPHNGHLAMALFARELLPADRILISVSDNPL 42
>sp|C7NTR1|RIBL_HALUD FAD synthase OS=Halorhabdus utahensis (strain DSM 12940 / JCM
11049 / AX-2) GN=ribL PE=3 SV=1
Length = 142
Score = 34.3 bits (77), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 16/86 (18%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAE--------LARDRIVVGVCDGPMLTNKQFAELI---Q 72
VV GTFD LH GH +L+ +A LAR R V D P+L N+Q E++
Sbjct: 4 VVAQGTFDLLHPGHLHYLREAAGMGDQLHVILAR-RENVTHKDPPILPNEQRREMVAALD 62
Query: 73 PVDERM----RNVEAYIKSIKPELVV 94
PVDE + ++ ++ I P+L+V
Sbjct: 63 PVDEAIVGHDDDIFIPVERIDPDLLV 88
>sp|D3S3T0|RIBL_METSF FAD synthase OS=Methanocaldococcus sp. (strain FS406-22) GN=ribL
PE=3 SV=1
Length = 151
Score = 34.3 bits (77), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 16/87 (18%)
Query: 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCD---------GPMLTNKQFAELIQ-- 72
VV GTFD LH GH LK + L + IV+ D P++ +Q E+++
Sbjct: 7 VVTAGTFDILHPGHYEILKFAKSLGDELIVIVARDETVKKLKGRKPIIPEEQRREMVEAL 66
Query: 73 -PVDE----RMRNVEAYIKSIKPELVV 94
PVD+ ++N I +KP+++V
Sbjct: 67 KPVDKAVLGSLKNKLEPILKLKPDIIV 93
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.135 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,738,630
Number of Sequences: 539616
Number of extensions: 2271335
Number of successful extensions: 7057
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 224
Number of HSP's that attempted gapping in prelim test: 6969
Number of HSP's gapped (non-prelim): 290
length of query: 154
length of database: 191,569,459
effective HSP length: 107
effective length of query: 47
effective length of database: 133,830,547
effective search space: 6290035709
effective search space used: 6290035709
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)