Query 031699
Match_columns 154
No_of_seqs 160 out of 1320
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 06:04:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031699.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031699hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3do8_A Phosphopantetheine aden 100.0 2.9E-33 9.8E-38 211.5 10.6 123 23-150 2-125 (148)
2 3h05_A Uncharacterized protein 99.7 6.2E-18 2.1E-22 130.6 2.3 88 21-115 2-92 (177)
3 1vlh_A Phosphopantetheine aden 99.6 2.7E-16 9.2E-21 120.5 7.0 82 18-114 9-90 (173)
4 3nbk_A Phosphopantetheine aden 99.6 6E-16 2.1E-20 119.9 8.8 73 18-98 18-90 (177)
5 3nd5_A Phosphopantetheine aden 99.6 2.4E-16 8.1E-21 121.3 6.4 70 20-97 1-71 (171)
6 3nv7_A Phosphopantetheine aden 99.6 5.6E-16 1.9E-20 117.8 8.3 69 21-97 2-70 (157)
7 3f3m_A Phosphopantetheine aden 99.6 3.2E-16 1.1E-20 120.3 6.3 70 21-98 3-72 (168)
8 1yum_A 'probable nicotinate-nu 99.6 5E-16 1.7E-20 125.0 7.5 88 21-114 23-111 (242)
9 4f3r_A Phosphopantetheine aden 99.6 5.4E-16 1.8E-20 118.3 6.6 70 20-98 4-73 (162)
10 2h29_A Probable nicotinate-nuc 99.6 2.7E-16 9.3E-21 121.2 4.8 88 21-113 2-90 (189)
11 2qjt_B Nicotinamide-nucleotide 99.6 6.7E-16 2.3E-20 127.7 5.9 88 20-111 6-95 (352)
12 2qtr_A Nicotinate (nicotinamid 99.6 9.9E-16 3.4E-20 117.4 5.8 88 21-113 2-90 (189)
13 1kam_A Deamido-NAD(+), nicotin 99.6 1.5E-15 5E-20 117.6 6.8 88 21-113 7-95 (194)
14 1k4m_A NAMN adenylyltransferas 99.6 2.1E-15 7.3E-20 118.3 6.4 85 23-113 4-90 (213)
15 3glv_A Lipopolysaccharide core 99.6 2.4E-15 8.3E-20 111.8 5.3 109 21-138 2-112 (143)
16 1nup_A FKSG76; NAD biosynthesi 99.5 2.6E-15 9E-20 121.2 4.3 89 20-115 5-100 (252)
17 1lw7_A Transcriptional regulat 99.5 7.6E-15 2.6E-19 122.9 7.0 81 21-106 2-88 (365)
18 1o6b_A Phosphopantetheine aden 99.5 1.7E-14 5.7E-19 109.1 8.2 62 21-89 2-63 (169)
19 1qjc_A Phosphopantetheine aden 99.5 2.4E-14 8.3E-19 106.6 8.2 69 21-97 1-69 (158)
20 3k9w_A Phosphopantetheine aden 99.5 3.7E-14 1.3E-18 110.5 9.5 71 19-97 20-90 (187)
21 1od6_A PPAT, phosphopantethein 99.5 9.9E-14 3.4E-18 103.6 8.5 66 24-95 3-68 (160)
22 1kqn_A Nmnat, nicotinamide mon 99.5 1.8E-14 6.2E-19 118.3 4.7 89 20-115 7-102 (279)
23 2b7l_A Glycerol-3-phosphate cy 99.5 3.1E-14 1E-18 103.6 5.3 65 21-88 1-65 (132)
24 1coz_A Protein (glycerol-3-pho 99.5 2.1E-14 7.2E-19 104.0 3.8 65 21-88 1-65 (129)
25 1f9a_A Hypothetical protein MJ 99.5 1.3E-13 4.3E-18 104.6 7.5 62 23-89 2-64 (168)
26 3hl4_A Choline-phosphate cytid 99.4 9.1E-14 3.1E-18 111.9 4.5 66 17-83 72-138 (236)
27 1ej2_A Nicotinamide mononucleo 99.4 6.6E-13 2.2E-17 101.8 7.7 62 22-88 4-66 (181)
28 3elb_A Ethanolamine-phosphate 99.4 2E-13 6.8E-18 115.1 4.4 70 17-88 194-266 (341)
29 2qjo_A Bifunctional NMN adenyl 99.3 6.1E-13 2.1E-17 109.2 5.2 78 20-102 6-83 (341)
30 3elb_A Ethanolamine-phosphate 99.3 1.1E-12 3.7E-17 110.6 5.7 63 19-83 5-67 (341)
31 1jhd_A Sulfate adenylyltransfe 98.6 3.9E-08 1.3E-12 84.3 6.8 83 21-109 192-278 (396)
32 1v47_A ATP sulfurylase; produc 98.5 8.7E-08 3E-12 80.9 5.1 81 21-108 155-238 (349)
33 2x0k_A Riboflavin biosynthesis 98.5 2.5E-07 8.6E-12 77.7 7.3 123 22-150 16-157 (338)
34 1mrz_A Riboflavin kinase/FMN a 98.4 1.2E-07 4.1E-12 78.2 3.6 114 24-149 2-129 (293)
35 2ejc_A Pantoate--beta-alanine 98.3 1.4E-06 4.6E-11 71.7 6.9 62 21-84 22-85 (280)
36 3op1_A Macrolide-efflux protei 98.1 4.4E-06 1.5E-10 69.4 6.5 64 21-84 20-91 (308)
37 3gmi_A UPF0348 protein MJ0951; 98.0 1.5E-05 5.2E-10 67.4 8.2 60 21-84 52-112 (357)
38 1v8f_A Pantoate-beta-alanine l 97.3 0.00061 2.1E-08 55.8 7.8 58 23-84 21-80 (276)
39 3ag6_A Pantothenate synthetase 95.8 0.028 9.7E-07 46.0 7.6 59 22-84 24-86 (283)
40 1r6x_A ATP:sulfate adenylyltra 95.5 0.049 1.7E-06 46.5 8.2 63 21-89 187-249 (395)
41 1g8f_A Sulfate adenylyltransfe 95.4 0.092 3.2E-06 46.0 9.9 63 21-89 188-250 (511)
42 3q12_A Pantoate--beta-alanine 95.2 0.017 5.9E-07 47.4 4.4 36 21-60 25-62 (287)
43 3cov_A Pantothenate synthetase 95.0 0.024 8E-07 46.9 4.6 60 24-84 35-97 (301)
44 2gks_A Bifunctional SAT/APS ki 94.9 0.096 3.3E-06 46.1 8.4 64 22-91 164-227 (546)
45 3uk2_A Pantothenate synthetase 94.7 0.047 1.6E-06 44.7 5.6 59 24-83 24-84 (283)
46 3inn_A Pantothenate synthetase 94.6 0.15 5E-06 42.4 8.3 60 21-84 43-106 (314)
47 1m8p_A Sulfate adenylyltransfe 93.9 0.13 4.5E-06 45.5 7.1 61 22-88 191-251 (573)
48 3mxt_A Pantothenate synthetase 90.8 0.12 4.1E-06 42.4 2.5 37 21-60 25-61 (285)
49 3n8h_A Pantothenate synthetase 90.0 0.35 1.2E-05 39.1 4.6 38 21-60 24-61 (264)
50 3cr8_A Sulfate adenylyltranfer 89.5 1.3 4.5E-05 39.0 8.3 70 22-99 165-236 (552)
51 1x6v_B Bifunctional 3'-phospho 81.8 7.5 0.00026 34.9 9.2 61 21-87 412-478 (630)
52 3plv_C 66 kDa U4/U6.U5 small n 73.0 2.6 9E-05 21.1 2.1 16 126-141 5-20 (21)
53 4h0a_A Uncharacterized protein 57.6 5.6 0.00019 32.6 2.5 18 125-142 210-227 (323)
54 4ifa_A Extracellular protein c 47.5 10 0.00035 31.4 2.5 17 126-142 226-242 (339)
55 2l9d_A Uncharacterized protein 40.3 16 0.00055 25.5 2.2 62 50-124 12-73 (108)
56 1jil_A Tyrrs, tyrosyl-tRNA syn 36.1 1.9E+02 0.0066 24.2 8.8 55 29-83 42-102 (420)
57 1yi8_B Tryptophanyl-tRNA synth 35.6 24 0.00082 29.1 3.0 27 33-59 35-63 (351)
58 2cya_A Tyrosyl-tRNA synthetase 33.9 39 0.0013 27.9 4.0 27 33-59 48-76 (364)
59 2zp1_A Tyrosyl-tRNA synthetase 30.0 47 0.0016 26.7 3.8 29 32-60 40-70 (314)
60 2dlc_X Tyrosyl-tRNA synthetase 27.0 53 0.0018 27.3 3.7 30 30-59 46-80 (394)
61 4dlp_A Aminoacyl-tRNA syntheta 26.7 34 0.0012 29.3 2.6 18 22-39 26-46 (536)
62 2f9f_A First mannosyl transfer 22.4 1.2E+02 0.0042 20.9 4.6 38 9-47 11-48 (177)
No 1
>3do8_A Phosphopantetheine adenylyltransferase; protein with unknown function, structural genomics, MCSG, PSI-2, protein structure initiative; 1.60A {Archaeoglobus fulgidus}
Probab=100.00 E-value=2.9e-33 Score=211.51 Aligned_cols=123 Identities=30% Similarity=0.518 Sum_probs=111.7
Q ss_pred EEEEcccCCCCCHHHHHHHHHHHHHhcCcEEEEEcCCCccccCCCCCCCCCHHHHHHHHHHHH-HhcCCCceEEEEEccC
Q 031699 23 AVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYI-KSIKPELVVQTEPITD 101 (154)
Q Consensus 23 ~v~~gGtFDplH~GH~~ll~~A~~~~~~~viVgvt~~~~~~~k~~~~~i~~~~~R~~~v~~~l-~~~~p~~~v~i~ei~d 101 (154)
++++||||||+|.||+.++++|++++.|+|+|++++++..+++ ..+++|+++|++|++.++ +.+++ ++.+.+|.|
T Consensus 2 ~~i~gGtFDPiH~GHl~l~~~a~~~~~d~viv~v~~~~~~~k~--~~~~~~~~~R~~ml~~a~~~~~~~--~~~i~~i~D 77 (148)
T 3do8_A 2 KVALGGTFEPLHEGHKKLIDVAIKLGGRDITIGVTSDRMARAR--IRSVLPFAIRAENVKRYVMRKYGF--EPEIVKITN 77 (148)
T ss_dssp CEEEEECCSSCCHHHHHHHHHHHHHHTTCEEEEEECHHHHHHH--SCCCSCHHHHHHHHHHHHHHHHSS--CCEEEEECS
T ss_pred EEEEEeeCCCCCHHHHHHHHHHHHhCCCEEEEEECCCcccccc--CCCCCCHHHHHHHHHHHHhcccCC--cEEEEeecC
Confidence 6899999999999999999999999768999999998876322 357899999999999999 88754 788999999
Q ss_pred CCCCcccccccceeeehhhhhccHHHHHHHHHHCCCCceeEEEeeeecC
Q 031699 102 PYGPSIVDENLEAIVVSKETLPGGLSVNKKRADRGLSQLKVWVPVLVVP 150 (154)
Q Consensus 102 ~~gps~t~~~l~~lVvs~Et~~~~~~iN~~R~~~gl~~l~i~~i~~v~~ 150 (154)
+|||+. ++++|+||||+||+.++..+|++|.++|++||++++|+.+..
T Consensus 78 ~~g~~~-~~~~d~ivvs~Et~~~~~~l~~~~~~~G~~~l~V~~v~~~~~ 125 (148)
T 3do8_A 78 PYGKTL-DVDFEYLVVSPETYEMALKINQKREELGKRKITIVKVDWMMA 125 (148)
T ss_dssp TTTTTT-TSCCSEEEECTTTHHHHHHHHHHHHHHTCCCCEEEEEECCC-
T ss_pred CCCCCC-CCCCCEEEEChhhcccHHHHHHHHHHcCCCeeEEEEeccEEc
Confidence 999996 699999999999999999999999999999999999999865
No 2
>3h05_A Uncharacterized protein VPA0413; nucleotidylyl, transferase, MCSG, midwest center for structu genomics, PSI; 1.65A {Vibrio parahaemolyticus}
Probab=99.68 E-value=6.2e-18 Score=130.63 Aligned_cols=88 Identities=17% Similarity=0.160 Sum_probs=64.1
Q ss_pred CcEEEEcccCCCCCHHHHHHHHHHHHHhcCcEEEEEcCCCccccCCCCCCCCCHHHHHHHHHHHHHhcC-CCceEEEEEc
Q 031699 21 YGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIK-PELVVQTEPI 99 (154)
Q Consensus 21 ~~~v~~gGtFDplH~GH~~ll~~A~~~~~~~viVgvt~~~~~~~k~~~~~i~~~~~R~~~v~~~l~~~~-p~~~v~i~ei 99 (154)
.++|++||||||+|.||+.+++ |++.. |+|+++++.+.. .| ....+.++|++|++.+++... +.+.++.+|.
T Consensus 2 ~~igi~gGsFdPih~GHl~i~~-a~~~~-d~v~~~p~~~~~--~k---~~~~~~~~R~~m~~~a~~~~~~~~~~v~~~E~ 74 (177)
T 3h05_A 2 KKIAIFGSAFNPPSLGHKSVIE-SLSHF-DLVLLEPSIAHA--WG---KNMLDYPIRCKLVDAFIKDMGLSNVQRSDLEQ 74 (177)
T ss_dssp CEEEEEEECCSSCCHHHHHHHT-TCTTS-SEEEEEECC------------CCCHHHHHHHHHHHHHHHCCTTEEECCHHH
T ss_pred cEEEEEEeccchhhHHHHHHHH-HHHHC-CEEEEEECCCCC--CC---CCCCCHHHHHHHHHHHHhcCCCCcEEEEehhh
Confidence 4689999999999999999998 77666 899999987532 22 346899999999999999874 3455555554
Q ss_pred c-CCCC-Cccccccccee
Q 031699 100 T-DPYG-PSIVDENLEAI 115 (154)
Q Consensus 100 ~-d~~g-ps~t~~~l~~l 115 (154)
. .+.| |+||.++++.+
T Consensus 75 ~l~~~~~~syT~dTl~~l 92 (177)
T 3h05_A 75 ALYQPGQSVTTYALLEKI 92 (177)
T ss_dssp HHC----CCCHHHHHHHH
T ss_pred hcccCCCCcchHHHHHHH
Confidence 2 1345 99998887754
No 3
>1vlh_A Phosphopantetheine adenylyltransferase; TM0741, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: PNS; 2.20A {Thermotoga maritima} SCOP: c.26.1.3
Probab=99.64 E-value=2.7e-16 Score=120.52 Aligned_cols=82 Identities=23% Similarity=0.387 Sum_probs=63.1
Q ss_pred CCCCcEEEEcccCCCCCHHHHHHHHHHHHHhcCcEEEEEcCCCccccCCCCCCCCCHHHHHHHHHHHHHhcCCCceEEEE
Q 031699 18 DNSYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIKPELVVQTE 97 (154)
Q Consensus 18 ~~~~~~v~~gGtFDplH~GH~~ll~~A~~~~~~~viVgvt~~~~~~~k~~~~~i~~~~~R~~~v~~~l~~~~p~~~v~i~ 97 (154)
-....+|++||||||+|.||+.++++|++++ |+|+|++++++ .| .+.+|.++|++|++.+++.. |.+.++.+
T Consensus 9 ~~~~~i~i~~GsFdP~H~GHl~l~~~A~~~~-D~viv~v~~~~---~k---k~~~~~~~R~~ml~~a~~~~-~~v~v~~~ 80 (173)
T 1vlh_A 9 HHHHMKAVYPGSFDPITLGHVDIIKRALSIF-DELVVLVTENP---RK---KCMFTLEERKKLIEEVLSDL-DGVKVDVH 80 (173)
T ss_dssp ----CEEEEEECCTTCCHHHHHHHHHHHTTC-SEEEEEEECCT---TC---CCSSCHHHHHHHHHHHTTTC-TTEEEEEE
T ss_pred cccceEEEEEEEECcCcHHHHHHHHHHHHHC-CEEEEEEeCCC---CC---CCCCCHHHHHHHHHHHhcCC-CCEEEecC
Confidence 3456789999999999999999999999999 89999999864 23 25799999999999999887 44555443
Q ss_pred EccCCCCCcccccccce
Q 031699 98 PITDPYGPSIVDENLEA 114 (154)
Q Consensus 98 ei~d~~gps~t~~~l~~ 114 (154)
+ | +|.++++.
T Consensus 81 e-----~--~tvd~l~~ 90 (173)
T 1vlh_A 81 H-----G--LLVDYLKK 90 (173)
T ss_dssp C-----S--CHHHHHHH
T ss_pred c-----c--hHHHHHHH
Confidence 3 2 55555544
No 4
>3nbk_A Phosphopantetheine adenylyltransferase; PPAT, PHP; HET: PNS; 1.58A {Mycobacterium tuberculosis} PDB: 3nba_A* 3pnb_A* 4e1a_A 3lcj_A 3rba_A* 1tfu_A* 3rff_A 3rhs_A* 3uc5_A*
Probab=99.64 E-value=6e-16 Score=119.94 Aligned_cols=73 Identities=27% Similarity=0.368 Sum_probs=60.5
Q ss_pred CCCCcEEEEcccCCCCCHHHHHHHHHHHHHhcCcEEEEEcCCCccccCCCCCCCCCHHHHHHHHHHHHHhcCCCceEEEE
Q 031699 18 DNSYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIKPELVVQTE 97 (154)
Q Consensus 18 ~~~~~~v~~gGtFDplH~GH~~ll~~A~~~~~~~viVgvt~~~~~~~k~~~~~i~~~~~R~~~v~~~l~~~~p~~~v~i~ 97 (154)
...|+++++||||||+|+||+.++++|++++ |+|+|+++.++ .| .+.++.++|++|++.+++.. |.+.++.+
T Consensus 18 ~~~mki~i~~GsFDPiH~GHl~ii~~A~~~~-D~Viv~v~~np---~K---~~~~s~eeR~~mv~~a~~~~-~~v~V~~~ 89 (177)
T 3nbk_A 18 GSHMTGAVCPGSFDPVTLGHVDIFERAAAQF-DEVVVAILVNP---AK---TGMFDLDERIAMVKESTTHL-PNLRVQVG 89 (177)
T ss_dssp --CCCEEEEEECCTTCCHHHHHHHHHHHHHS-SEEEEEECCCT---TS---CCSSCHHHHHHHHHHHCTTC-TTEEEEEC
T ss_pred CCCCEEEEEEEeeCCCCHHHHHHHHHHHHHC-CEEEEEEcCCC---CC---CCCCCHHHHHHHHHHHhCCC-CCEEEEec
Confidence 3568899999999999999999999999999 89999999764 33 35799999999999999886 44555544
Q ss_pred E
Q 031699 98 P 98 (154)
Q Consensus 98 e 98 (154)
+
T Consensus 90 e 90 (177)
T 3nbk_A 90 H 90 (177)
T ss_dssp C
T ss_pred C
Confidence 3
No 5
>3nd5_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A BIO pathway; 2.30A {Enterococcus faecalis} SCOP: c.26.1.0 PDB: 3nd6_A* 3nd7_A*
Probab=99.64 E-value=2.4e-16 Score=121.32 Aligned_cols=70 Identities=26% Similarity=0.436 Sum_probs=56.2
Q ss_pred CCcEEEEcccCCCCCHHHHHHHHHHHHHhcCcEEEEEcCCCccccCCCCCCCCCHHHHHHHHHHHHHhcCCCceE-EEE
Q 031699 20 SYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIKPELVV-QTE 97 (154)
Q Consensus 20 ~~~~v~~gGtFDplH~GH~~ll~~A~~~~~~~viVgvt~~~~~~~k~~~~~i~~~~~R~~~v~~~l~~~~p~~~v-~i~ 97 (154)
+|++|++||||||+|.||+.++++|++++ |+|+|+++.++ .| .+..|.++|++|++.+++.. |.+.+ +.+
T Consensus 1 Mm~i~i~~GsFDPiH~GHl~i~~~a~~~~-D~viv~v~~~~---~K---~~~~~~~~R~~ml~~a~~~~-~~v~v~~~~ 71 (171)
T 3nd5_A 1 MRKIALFPGSFDPMTNGHLNLIERSAKLF-DEVIIGVFINT---SK---QTLFTPEEKKYLIEEATKEM-PNVRVIMQE 71 (171)
T ss_dssp CCCEEEEEECCTTCCHHHHHHHHHHHTTC-SEEEEEEEC------------CCCHHHHHHHHHHHHTTC-TTEEEEEEC
T ss_pred CCeEEEEEEEccccCHHHHHHHHHHHHHC-CCeEEEEecCC---CC---CCCCCHHHHHHHHHHHHccC-CCEEEeeCC
Confidence 36799999999999999999999999998 89999997653 33 36799999999999999886 44555 444
No 6
>3nv7_A Phosphopantetheine adenylyltransferase; helicobacter pylori 26695 strain, mutant I4V/N76Y, phosphopa adenylyltransferase; 1.75A {Helicobacter pylori} PDB: 3otw_A*
Probab=99.63 E-value=5.6e-16 Score=117.80 Aligned_cols=69 Identities=25% Similarity=0.390 Sum_probs=58.2
Q ss_pred CcEEEEcccCCCCCHHHHHHHHHHHHHhcCcEEEEEcCCCccccCCCCCCCCCHHHHHHHHHHHHHhcCCCceEEEE
Q 031699 21 YGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIKPELVVQTE 97 (154)
Q Consensus 21 ~~~v~~gGtFDplH~GH~~ll~~A~~~~~~~viVgvt~~~~~~~k~~~~~i~~~~~R~~~v~~~l~~~~p~~~v~i~ 97 (154)
|+++++||||||+|.||+.++++|++++ |+|+|++++++ .| .++++.++|.+|++.+++.. +.+.+..+
T Consensus 2 m~i~i~~GsFDPiH~GHl~ii~~A~~~~-D~viv~v~~~~---~K---~~~~~~~eR~~ml~~a~~~~-~~v~v~~~ 70 (157)
T 3nv7_A 2 QKVGIYPGTFDPVTNGHIDIIHRSSELF-EKLIVAVAHSS---AK---NPMFSLDERLKMIQLATKSF-KNVECVAF 70 (157)
T ss_dssp -CEEEEEECCTTCCHHHHHHHHHHHTTS-SEEEEEEECCG---GG---CCSSCHHHHHHHHHHHHTTS-TTEEEEEE
T ss_pred CEEEEEEEEcCCCCHHHHHHHHHHHHhC-CceEEEEccCC---CC---CCCCCHHHHHHHHHHHhcCC-CcEEEEec
Confidence 6799999999999999999999999998 89999998765 23 46799999999999999887 44555443
No 7
>3f3m_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A BIO pathway, coenzyme A biosynthesis, nucleotidyltransferase; HET: PPS; 2.40A {Staphylococcus aureus} SCOP: c.26.1.0
Probab=99.63 E-value=3.2e-16 Score=120.29 Aligned_cols=70 Identities=29% Similarity=0.383 Sum_probs=56.9
Q ss_pred CcEEEEcccCCCCCHHHHHHHHHHHHHhcCcEEEEEcCCCccccCCCCCCCCCHHHHHHHHHHHHHhcCCCceEEEEE
Q 031699 21 YGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIKPELVVQTEP 98 (154)
Q Consensus 21 ~~~v~~gGtFDplH~GH~~ll~~A~~~~~~~viVgvt~~~~~~~k~~~~~i~~~~~R~~~v~~~l~~~~p~~~v~i~e 98 (154)
.+++++||||||+|.||+.++++|++++ |+|+|+++.++ .| .++++.++|++|++.+++.. |.+.++.++
T Consensus 3 ~ki~i~~GsFDPiH~GHl~i~~~a~~~~-d~viv~v~~~p---~K---~~~~~~~~R~~ml~~a~~~~-~~v~v~~~e 72 (168)
T 3f3m_A 3 HTIAVIPGSFDPITYGHLDIIERSTDRF-DEIHVCVLKNS---KK---EGTFSLEERMDLIEQSVKHL-PNVKVHQFS 72 (168)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHGGGS-SEEEEEECC-----------CCSCHHHHHHHHHHHTTTC-TTEEEEECC
T ss_pred ceEEEEEEEcCcCCHHHHHHHHHHHHhC-CEEEEEEcCCC---CC---CCCCCHHHHHHhHHHHhcCC-CCEEEEEcC
Confidence 4689999999999999999999999998 89999999754 33 46799999999999999886 445554443
No 8
>1yum_A 'probable nicotinate-nucleotide adenylyltransferase; alpha/beta domain; HET: CIT NCN; 1.70A {Pseudomonas aeruginosa} PDB: 1yul_A* 1yun_A*
Probab=99.62 E-value=5e-16 Score=124.97 Aligned_cols=88 Identities=24% Similarity=0.268 Sum_probs=72.8
Q ss_pred CcEEEEcccCCCCCHHHHHHHHHHHHHh-cCcEEEEEcCCCccccCCCCCCCCCHHHHHHHHHHHHHhcCCCceEEEEEc
Q 031699 21 YGAVVLGGTFDRLHDGHRLFLKASAELA-RDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIKPELVVQTEPI 99 (154)
Q Consensus 21 ~~~v~~gGtFDplH~GH~~ll~~A~~~~-~~~viVgvt~~~~~~~k~~~~~i~~~~~R~~~v~~~l~~~~p~~~v~i~ei 99 (154)
++++++||||||+|.||+.++++|++.+ .|+|+|+++.++.. |+ .++.++++|++|++.++... +.+.++.+++
T Consensus 23 ~~i~i~~GsFdPiH~GHl~li~~a~~~~~ld~v~v~~~~~~p~--K~--~~~~~~~~R~~ml~~a~~~~-~~v~v~~~e~ 97 (242)
T 1yum_A 23 KRIGLFGGTFDPVHIGHMRSAVEMAEQFALDELRLLPNARPPH--RE--TPQVSAAQRLAMVERAVAGV-ERLTVDPREL 97 (242)
T ss_dssp CEEEEEEECCTTCCHHHHHHHHHHHHHHTCSEEEEEECCCCGG--GS--CTTCCHHHHHHHHHHHHTTC-TTEEECCGGG
T ss_pred ceEEEEEeeCcHhhHHHHHHHHHHHHHcCCCEEEEEEcCCCCC--CC--CCCCCHHHHHHHHHHHhcCC-CeEEEeeeee
Confidence 5689999999999999999999999886 47899999988643 32 35789999999999999886 4577766777
Q ss_pred cCCCCCcccccccce
Q 031699 100 TDPYGPSIVDENLEA 114 (154)
Q Consensus 100 ~d~~gps~t~~~l~~ 114 (154)
++.||+||.++++.
T Consensus 98 -~~~~~sytvdtl~~ 111 (242)
T 1yum_A 98 -QRDKPSYTIDTLES 111 (242)
T ss_dssp -GSSSSCCHHHHHHH
T ss_pred -cCCCCCCHHHHHHH
Confidence 56799999887653
No 9
>4f3r_A Phosphopantetheine adenylyltransferase; phosphopantetheine adenylyltranferase; 2.25A {Coxiella burnetii}
Probab=99.62 E-value=5.4e-16 Score=118.34 Aligned_cols=70 Identities=20% Similarity=0.306 Sum_probs=55.6
Q ss_pred CCcEEEEcccCCCCCHHHHHHHHHHHHHhcCcEEEEEcCCCccccCCCCCCCCCHHHHHHHHHHHHHhcCCCceEEEEE
Q 031699 20 SYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIKPELVVQTEP 98 (154)
Q Consensus 20 ~~~~v~~gGtFDplH~GH~~ll~~A~~~~~~~viVgvt~~~~~~~k~~~~~i~~~~~R~~~v~~~l~~~~p~~~v~i~e 98 (154)
+++++++||||||+|.||+.++++|++++ |+|+|+++.++ .| .++++.++|++|++.++.. +.+.++.++
T Consensus 4 mm~i~i~~GsFDPiH~GHl~li~~A~~~~-d~viv~v~~~~---~K---~~~~~~~~R~~m~~~~~~~--~~v~V~~~~ 73 (162)
T 4f3r_A 4 MKPIAIYPGTFDPLTNGHVDIIERALPLF-NKIIVACAPTS---RK---DPHLKLEERVNLIADVLTD--ERVEVLPLT 73 (162)
T ss_dssp -CCEEEEEECCTTCCHHHHHHHHHHGGGC-SEEEEEECCC------------CCHHHHHHHHHHHCCC--TTEEEEECC
T ss_pred ceEEEEEEEEcCCCCHHHHHHHHHHHHHC-CcEEEEEecCC---cc---CCCCCHHHHHHHHHHhhCC--CCEEEEecc
Confidence 46899999999999999999999999999 89999999764 33 4679999999999999876 445555443
No 10
>2h29_A Probable nicotinate-nucleotide adenylyltransferase; NADD, namnat, nmnat; HET: DND; 2.00A {Staphylococcus aureus} PDB: 2h2a_A*
Probab=99.61 E-value=2.7e-16 Score=121.23 Aligned_cols=88 Identities=16% Similarity=0.157 Sum_probs=71.7
Q ss_pred CcEEEEcccCCCCCHHHHHHHHHHHHHh-cCcEEEEEcCCCccccCCCCCCCCCHHHHHHHHHHHHHhcCCCceEEEEEc
Q 031699 21 YGAVVLGGTFDRLHDGHRLFLKASAELA-RDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIKPELVVQTEPI 99 (154)
Q Consensus 21 ~~~v~~gGtFDplH~GH~~ll~~A~~~~-~~~viVgvt~~~~~~~k~~~~~i~~~~~R~~~v~~~l~~~~p~~~v~i~ei 99 (154)
++++++||||||+|.||+.++++|++.+ .+.+++.++.++..+. ..++.++++|++|++.+++.. |.+.++.+|+
T Consensus 2 ~~~~v~~GsFdp~H~GH~~l~~~a~~~~~~d~v~~~~~~~~~~k~---~~~~~~~~~R~~m~~~a~~~~-~~v~v~~~e~ 77 (189)
T 2h29_A 2 KKIVLYGGQFNPIHTAHMIVASEVFHELQPDEFYFLPSFMSPLKK---HHDFIDVQHRLTMIQMIIDEL-GFGDICDDEI 77 (189)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHHHCCSEEEEEECSBCTTSC---CCSSCCCHHHHHHHHHHHHHH-TCCEECCHHH
T ss_pred ceEEEEEecCCcccHHHHHHHHHHHHHcCCCEEEEEECCCCCCCc---CCCCCCHHHHHHHHHHHHcCC-CCEEEehHHh
Confidence 4689999999999999999999999986 3788887777665432 135789999999999999987 5577777777
Q ss_pred cCCCCCcccccccc
Q 031699 100 TDPYGPSIVDENLE 113 (154)
Q Consensus 100 ~d~~gps~t~~~l~ 113 (154)
++-||++|.++++
T Consensus 78 -~~~~~syt~dtl~ 90 (189)
T 2h29_A 78 -KRGGQSYTYDTIK 90 (189)
T ss_dssp -HHCSBCCHHHHHH
T ss_pred -cCCCCCCHHHHHH
Confidence 5569999988776
No 11
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=99.60 E-value=6.7e-16 Score=127.71 Aligned_cols=88 Identities=17% Similarity=0.239 Sum_probs=68.3
Q ss_pred CCcEEEEcccCCCCCHHHHHHHHHHHHHhcCcEEEEEcCCCccccCCCCCCCCCHHHHHHHHHHHHHhcC-CCceEEEEE
Q 031699 20 SYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIK-PELVVQTEP 98 (154)
Q Consensus 20 ~~~~v~~gGtFDplH~GH~~ll~~A~~~~~~~viVgvt~~~~~~~k~~~~~i~~~~~R~~~v~~~l~~~~-p~~~v~i~e 98 (154)
+++++++||||||+|+||+.++++|++++ |+++|+|++++..++| ...+|+++|++|++.+++... |..++.+..
T Consensus 6 ~~~~~i~~GtFdP~h~GHl~~~~~a~~~~-d~~~~~v~~~~~~~~~---~~~~~~~~R~~m~~~~~~~~~~~~~~~~~~~ 81 (352)
T 2qjt_B 6 MYDISVFIGRFQPFHKGHLHNIIIALQNS-KKVIINIGSCFNTPNI---KNPFSFEQRKQMIESDLQVAGIDLDTVVIEP 81 (352)
T ss_dssp CEEEEEEEECCTTCCHHHHHHHHHHHHSE-EEEEEEEEEESCCCCS---SSCSCHHHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred cccEEEEEEecCCCChHHHHHHHHHHHhC-CcEEEEECCCCCCccc---CCCCCHHHHHHHHHHHhccccCccceEEEEE
Confidence 36799999999999999999999999997 7999999876654333 235899999999999997652 234566666
Q ss_pred ccCC-CCCcccccc
Q 031699 99 ITDP-YGPSIVDEN 111 (154)
Q Consensus 99 i~d~-~gps~t~~~ 111 (154)
..|. ++...|.+.
T Consensus 82 ~~d~~~~~~~~~~~ 95 (352)
T 2qjt_B 82 LADYFYQEQKWQDE 95 (352)
T ss_dssp EECCTTCHHHHHHH
T ss_pred cCCCcCChHHHHHH
Confidence 6555 566666555
No 12
>2qtr_A Nicotinate (nicotinamide) nucleotide adenylyltran; NAD, nucleotidyltransferase, pyridine nucleotide biosynthesi transferase; HET: NXX; 1.70A {Bacillus anthracis} PDB: 3dv2_A 3mla_A* 3hfj_A* 3mlb_A* 3mmx_A* 3e27_A* 2qtn_A* 2qtm_A*
Probab=99.59 E-value=9.9e-16 Score=117.36 Aligned_cols=88 Identities=20% Similarity=0.259 Sum_probs=68.5
Q ss_pred CcEEEEcccCCCCCHHHHHHHHHHHHHh-cCcEEEEEcCCCccccCCCCCCCCCHHHHHHHHHHHHHhcCCCceEEEEEc
Q 031699 21 YGAVVLGGTFDRLHDGHRLFLKASAELA-RDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIKPELVVQTEPI 99 (154)
Q Consensus 21 ~~~v~~gGtFDplH~GH~~ll~~A~~~~-~~~viVgvt~~~~~~~k~~~~~i~~~~~R~~~v~~~l~~~~p~~~v~i~ei 99 (154)
++++++||||||+|.||+.++++|++.+ .+.+++.++..+..+. ...+.+.++|++|++.+++.++ .+.++.+++
T Consensus 2 ~~i~i~~GsFDPvH~GH~~li~~a~~~~~~d~v~~~~~~~~~~k~---~~~~~~~~~R~~ml~~~~~~~~-~v~v~~~e~ 77 (189)
T 2qtr_A 2 RKIGIIGGTFDPPHYGHLLIANEVYHALNLEEVWFLPNQIPPHKQ---GRNITSVESRLQMLELATEAEE-HFSICLEEL 77 (189)
T ss_dssp CEEEEEEECCSSCCHHHHC-CHHHHHHTTCSEEEEEECSSCTTCT---TSCCCCHHHHHHHHHHHHTTCT-TEEECCTGG
T ss_pred CeEEEEecCcccccHHHHHHHHHHHHHcCCCEEEEEECCCCCCcc---CCCCCCHHHHHHHHHHHhCCCC-CEEEehHHh
Confidence 4689999999999999999999999986 4789999987664432 1347899999999999998874 455555665
Q ss_pred cCCCCCcccccccc
Q 031699 100 TDPYGPSIVDENLE 113 (154)
Q Consensus 100 ~d~~gps~t~~~l~ 113 (154)
+.-|+++|.++++
T Consensus 78 -~~~~~~~~~~~l~ 90 (189)
T 2qtr_A 78 -SRKGPSYTYDTML 90 (189)
T ss_dssp -GSCSCCCHHHHHH
T ss_pred -cCCCCCCHHHHHH
Confidence 4567888776654
No 13
>1kam_A Deamido-NAD(+), nicotinate-nucleotide adenylyltransferase; rossman fold; 2.10A {Bacillus subtilis} SCOP: c.26.1.3 PDB: 1kaq_A*
Probab=99.59 E-value=1.5e-15 Score=117.56 Aligned_cols=88 Identities=26% Similarity=0.275 Sum_probs=65.9
Q ss_pred CcEEEEcccCCCCCHHHHHHHHHHHHHh-cCcEEEEEcCCCccccCCCCCCCCCHHHHHHHHHHHHHhcCCCceEEEEEc
Q 031699 21 YGAVVLGGTFDRLHDGHRLFLKASAELA-RDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIKPELVVQTEPI 99 (154)
Q Consensus 21 ~~~v~~gGtFDplH~GH~~ll~~A~~~~-~~~viVgvt~~~~~~~k~~~~~i~~~~~R~~~v~~~l~~~~p~~~v~i~ei 99 (154)
.+++++||||||+|.||+.++++|++.+ .++++++++.++.. |. ...+.++++|++|++.+++.. +.+.++.+++
T Consensus 7 ~~~~v~~GsFdp~H~GH~~l~~~a~~~~~~d~v~~~~~~~~~~--k~-~~~~~~~~~R~~ml~~a~~~~-~~v~v~~~e~ 82 (194)
T 1kam_A 7 KKIGIFGGTFDPPHNGHLLMANEVLYQAGLDEIWFMPNQIPPH--KQ-NEDYTDSFHRVEMLKLAIQSN-PSFKLELVEM 82 (194)
T ss_dssp CEEEEEEECCSSCCHHHHHHHHHHHHHTTCSEEEEEECCCC------------CHHHHHHHHHHHHTTC-TTEEECCGGG
T ss_pred cEEEEEEeccccccHHHHHHHHHHHHHhCCCEEEEEECCCCCC--cC-CcCCCCHHHHHHHHHHHHcCC-CCeEEeHHHh
Confidence 4689999999999999999999999986 37899999876643 32 135789999999999999987 4566666666
Q ss_pred cCCCCCcccccccc
Q 031699 100 TDPYGPSIVDENLE 113 (154)
Q Consensus 100 ~d~~gps~t~~~l~ 113 (154)
+..|+++|.++++
T Consensus 83 -~~~~~~~t~~~l~ 95 (194)
T 1kam_A 83 -EREGPSYTFDTVS 95 (194)
T ss_dssp -STTCCCSHHHHHH
T ss_pred -cCCCCCChHHHHH
Confidence 5568888776554
No 14
>1k4m_A NAMN adenylyltransferase; nucleotidyltransferase; HET: NAD CIT; 1.90A {Escherichia coli} SCOP: c.26.1.3 PDB: 1k4k_A*
Probab=99.57 E-value=2.1e-15 Score=118.30 Aligned_cols=85 Identities=22% Similarity=0.296 Sum_probs=68.3
Q ss_pred E-EEEcccCCCCCHHHHHHHHHHHHHh-cCcEEEEEcCCCccccCCCCCCCCCHHHHHHHHHHHHHhcCCCceEEEEEcc
Q 031699 23 A-VVLGGTFDRLHDGHRLFLKASAELA-RDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIKPELVVQTEPIT 100 (154)
Q Consensus 23 ~-v~~gGtFDplH~GH~~ll~~A~~~~-~~~viVgvt~~~~~~~k~~~~~i~~~~~R~~~v~~~l~~~~p~~~v~i~ei~ 100 (154)
+ +++||||||+|.||+.++++|.+.+ .+++++.++.++..+ . .++.+.++|++|++.++... +.+.++.+++
T Consensus 4 i~~i~~GsFdPiH~GH~~l~~~a~~~~~~d~v~~~~~~~~~~k--~--~~~~~~~~R~~ml~~a~~~~-~~v~v~~~e~- 77 (213)
T 1k4m_A 4 LQALFGGTFDPVHYGHLKPVETLANLIGLTRVTIIPNNVPPHR--P--QPEANSVQRKHMLELAIADK-PLFTLDEREL- 77 (213)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHHHHTCSCEEEEECSSCTTS--C--CCSSCHHHHHHHHHHHHTTC-TTEEECCHHH-
T ss_pred EEEEEEeCcCCCCHHHHHHHHHHHHHcCCCEEEEEECCCCCCC--C--CCCCCHHHHHHHHHHHhccC-CCEEEeHHHh-
Confidence 6 9999999999999999999999986 478999888776442 2 24789999999999999987 4566666665
Q ss_pred CCCCCcccccccc
Q 031699 101 DPYGPSIVDENLE 113 (154)
Q Consensus 101 d~~gps~t~~~l~ 113 (154)
+..|+++|.++++
T Consensus 78 ~~~~~s~t~~~l~ 90 (213)
T 1k4m_A 78 KRNAPSYTAQTLK 90 (213)
T ss_dssp HCSSCCCHHHHHH
T ss_pred cCCCCCcHHHHHH
Confidence 4568888766655
No 15
>3glv_A Lipopolysaccharide core biosynthesis protein; structural GEN PSI, MCSG, protein structure initiative; HET: AMP; 1.99A {Thermoplasma volcanium GSS1}
Probab=99.56 E-value=2.4e-15 Score=111.75 Aligned_cols=109 Identities=21% Similarity=0.218 Sum_probs=79.8
Q ss_pred CcEEEEcccCCCCCHHHHHHHHHHHHHhcCcEEEEEcCCCccccCCCCCCCCCHHHHHHHHHHHHHhcCCCceEEEEEcc
Q 031699 21 YGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIKPELVVQTEPIT 100 (154)
Q Consensus 21 ~~~v~~gGtFDplH~GH~~ll~~A~~~~~~~viVgvt~~~~~~~k~~~~~i~~~~~R~~~v~~~l~~~~p~~~v~i~ei~ 100 (154)
|++++++|+||++|.||..++++|.+++ +.++|+++.++....+ .+.++.|.++|++|++.+ ..++ .+.+ .
T Consensus 2 m~~v~~~G~FD~vH~GH~~li~~a~~~~-~~~~v~v~~~~~~~~~-~~~~l~~~~eR~~~l~~~-~~vd---~v~~--~- 72 (143)
T 3glv_A 2 MIRVMATGVFDILHLGHIHYLKESKKLG-DELVVVVARDSTARNN-GKIPIFDENSRLALISEL-KVVD---RAIL--G- 72 (143)
T ss_dssp CCEEEEEECCSSCCHHHHHHHHHHHTTS-SEEEEEECCHHHHHHT-TCCCSSCHHHHHHHHTTB-TTCS---EEEE--C-
T ss_pred ceEEEEEeecCCCCHHHHHHHHHHHHhC-CCcEEEEECCcchhhc-CCCCCCCHHHHHHHHHhc-CCCC---EEEE--c-
Confidence 6899999999999999999999999998 6799999887543222 246789999999999863 2232 1111 1
Q ss_pred CCCCCc--ccccccceeeehhhhhccHHHHHHHHHHCCCC
Q 031699 101 DPYGPS--IVDENLEAIVVSKETLPGGLSVNKKRADRGLS 138 (154)
Q Consensus 101 d~~gps--~t~~~l~~lVvs~Et~~~~~~iN~~R~~~gl~ 138 (154)
.+.+.. ...-..+.+|+..+..-+...+++...++|+.
T Consensus 73 ~~~~f~~~~~~l~~~~iv~G~d~~f~~~~l~~~~~~~g~~ 112 (143)
T 3glv_A 73 HEGDMMKTVIEVKPDIITLGYDQKFDEAELQSKINKLGIT 112 (143)
T ss_dssp CTTCHHHHHHHHCCSEEEECTTCHHHHHHHHHHHHHHTCC
T ss_pred CchhHHHHHHhcCCCEEEECCCCCCCHHHHHHHHHHcCCe
Confidence 222211 12235689999999877777899999999985
No 16
>1nup_A FKSG76; NAD biosynthesis, mitochondria, pyridine adenylyltransferase catalysis, transferase; HET: NMN; 1.90A {Homo sapiens} SCOP: c.26.1.3 PDB: 1nuq_A* 1nur_A 1nus_A* 1nut_A* 1nuu_A*
Probab=99.54 E-value=2.6e-15 Score=121.18 Aligned_cols=89 Identities=9% Similarity=0.026 Sum_probs=69.2
Q ss_pred CCcEEEEcccCCCCCHHHHHHHHHHHHHhc-Cc--EEEEE----cCCCccccCCCCCCCCCHHHHHHHHHHHHHhcCCCc
Q 031699 20 SYGAVVLGGTFDRLHDGHRLFLKASAELAR-DR--IVVGV----CDGPMLTNKQFAELIQPVDERMRNVEAYIKSIKPEL 92 (154)
Q Consensus 20 ~~~~v~~gGtFDplH~GH~~ll~~A~~~~~-~~--viVgv----t~~~~~~~k~~~~~i~~~~~R~~~v~~~l~~~~p~~ 92 (154)
.++++++||||||+|.||+.++++|++.+. +. .+||+ +..+ +.| ..+.+.++|++|++.+++.. |.+
T Consensus 5 ~~~i~i~~GsFdPiH~GHl~l~~~a~~~~~~~~~~~vv~~~~~p~~~~--~~k---~~~~~~~~R~~m~~~ai~~~-~~~ 78 (252)
T 1nup_A 5 IPVVLLACGSFNPITNMHLRMFEVARDHLHQTGMYQVIQGIISPVNDT--YGK---KDLAASHHRVAMARLALQTS-DWI 78 (252)
T ss_dssp EEEEEEEEECCTTCCHHHHHHHHHHHHHHHHTTSEEEEEEEEEECCTT--CSS---SCCCCHHHHHHHHHHHGGGC-SSE
T ss_pred CceEEEEEecCcHhhHHHHHHHHHHHHHhcccCCceEEEEEEeCCCCc--ccC---CCCCCHHHHHHHHHHHhcCC-Cce
Confidence 367899999999999999999999998873 32 44432 3322 222 34689999999999999986 568
Q ss_pred eEEEEEccCCCCCccccccccee
Q 031699 93 VVQTEPITDPYGPSIVDENLEAI 115 (154)
Q Consensus 93 ~v~i~ei~d~~gps~t~~~l~~l 115 (154)
.++.+|+ ..-|++||.++++.+
T Consensus 79 ~v~~~E~-~~~~~syTidtL~~l 100 (252)
T 1nup_A 79 RVDPWES-EQAQWMETVKVLRHH 100 (252)
T ss_dssp EECCHHH-HSSSCCCHHHHHHHH
T ss_pred EeehHHh-cCCCCCCHHHHHHHH
Confidence 8888887 677999998887765
No 17
>1lw7_A Transcriptional regulator NADR; NMN, NMN adenylyl transferase, ribosylnicotinamide KINA transferase; HET: NAD; 2.90A {Haemophilus influenzae} SCOP: c.26.1.3 c.37.1.1
Probab=99.54 E-value=7.6e-15 Score=122.87 Aligned_cols=81 Identities=20% Similarity=0.315 Sum_probs=62.7
Q ss_pred CcEEEEcccCCCCCHHHHHHHHHHHHHhcCcEEEEEcCCCcc-----ccCCCCCCCCCHHHHHHHHHHHHHhcCCC-ceE
Q 031699 21 YGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPML-----TNKQFAELIQPVDERMRNVEAYIKSIKPE-LVV 94 (154)
Q Consensus 21 ~~~v~~gGtFDplH~GH~~ll~~A~~~~~~~viVgvt~~~~~-----~~k~~~~~i~~~~~R~~~v~~~l~~~~p~-~~v 94 (154)
++++++||||||+|+||+.++++|++++ |+|+|+|++++.. +.++.+. .+|+++|++|++.++... |. +.+
T Consensus 2 ~~~~i~~GtFdP~h~GHl~~~~~a~~~~-d~v~v~~~~~~~~~~~~~~~~~~~~-~~~~~~R~~m~~~~~~~~-~~~~~v 78 (365)
T 1lw7_A 2 KKVGVIFGKFYPVHTGHINMIYEAFSKV-DELHVIVCSDTVRDLKLFYDSKMKR-MPTVQDRLRWMQQIFKYQ-KNQIFI 78 (365)
T ss_dssp CCEEEEEECCSSCCHHHHHHHHHHHTTC-SEEEEEEEECHHHHHHHHHHTTCSS-CCCHHHHHHHHHHHTSTT-TTTEEE
T ss_pred CcEEEEEEeeCCCCHHHHHHHHHHHHHC-CEEEEEECCCCccccccccccccCC-CCCHHHHHHHHHHHhhcC-CCcEEE
Confidence 5689999999999999999999999998 8999999988753 1111112 389999999999999876 44 444
Q ss_pred EEEEccCCCCCc
Q 031699 95 QTEPITDPYGPS 106 (154)
Q Consensus 95 ~i~ei~d~~gps 106 (154)
.. +.+..+|+
T Consensus 79 ~~--~~~~~~~~ 88 (365)
T 1lw7_A 79 HH--LVEDGIPS 88 (365)
T ss_dssp EE--EECSSSCC
T ss_pred EE--eccCCCCC
Confidence 44 43446666
No 18
>1o6b_A Phosphopantetheine adenylyltransferase; structural genomics; HET: ADP; 2.20A {Bacillus subtilis} SCOP: c.26.1.3
Probab=99.54 E-value=1.7e-14 Score=109.09 Aligned_cols=62 Identities=26% Similarity=0.359 Sum_probs=53.7
Q ss_pred CcEEEEcccCCCCCHHHHHHHHHHHHHhcCcEEEEEcCCCccccCCCCCCCCCHHHHHHHHHHHHHhcC
Q 031699 21 YGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIK 89 (154)
Q Consensus 21 ~~~v~~gGtFDplH~GH~~ll~~A~~~~~~~viVgvt~~~~~~~k~~~~~i~~~~~R~~~v~~~l~~~~ 89 (154)
++++++||||||+|.||+.++++|++.+ ++++|+++.++ .| .++.|.++|++|++.++..++
T Consensus 2 ~~i~i~~GsFDpvH~GH~~li~~a~~~~-d~v~v~~~~~p---~k---~~l~~~~~R~~ml~~a~~~~~ 63 (169)
T 1o6b_A 2 ASIAVCPGSFDPVTYGHLDIIKRGAHIF-EQVYVCVLNNS---SK---KPLFSVEERCELLREVTKDIP 63 (169)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHHHS-SEEEEEECCCC---SS---CCSSCHHHHHHHHHHHHTTCT
T ss_pred CcEEEEEEeeCCCCHHHHHHHHHHHHhC-CEEEEEECCCC---cc---CCCCCHHHHHHHHHHHHhcCC
Confidence 4789999999999999999999999998 88988888542 33 357899999999999998874
No 19
>1qjc_A Phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.64A {Escherichia coli} SCOP: c.26.1.3 PDB: 1h1t_A* 1gn8_A* 1b6t_A* 3l92_A* 3l93_A
Probab=99.53 E-value=2.4e-14 Score=106.57 Aligned_cols=69 Identities=17% Similarity=0.348 Sum_probs=56.6
Q ss_pred CcEEEEcccCCCCCHHHHHHHHHHHHHhcCcEEEEEcCCCccccCCCCCCCCCHHHHHHHHHHHHHhcCCCceEEEE
Q 031699 21 YGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIKPELVVQTE 97 (154)
Q Consensus 21 ~~~v~~gGtFDplH~GH~~ll~~A~~~~~~~viVgvt~~~~~~~k~~~~~i~~~~~R~~~v~~~l~~~~p~~~v~i~ 97 (154)
++++++||||||+|.||+.++++|++.+ ++++++++.++ .| .++.+.++|++|++.++..++ .+.+..+
T Consensus 1 ~~i~i~~GsFDpvH~GH~~l~~~a~~~~-d~v~v~~~~~p---~k---~~~~~~~~R~~ml~~a~~~~~-~v~v~~~ 69 (158)
T 1qjc_A 1 QKRAIYPGTFDPITNGHIDIVTRATQMF-DHVILAIAASP---SK---KPMFTLEERVALAQQATAHLG-NVEVVGF 69 (158)
T ss_dssp -CEEEEEECCTTCCHHHHHHHHHHHTTS-SEEEEEEESCC---SS---CCSSCHHHHHHHHHHHTTTCT-TEEEEEE
T ss_pred CCEEEEEecCCCCCHHHHHHHHHHHHhC-CEEEEEECCCC---CC---CCCCCHHHHHHHHHHHHhcCC-CeEEccc
Confidence 3689999999999999999999999998 78999998764 23 257899999999999988874 3444433
No 20
>3k9w_A Phosphopantetheine adenylyltransferase; niaid, ssgcid, seattle structural genomics center for infect disease, coenzyme A, COA; HET: 4PS ADE PG4; 1.60A {Burkholderia pseudomallei} PDB: 3ikz_A* 3pxu_A*
Probab=99.53 E-value=3.7e-14 Score=110.54 Aligned_cols=71 Identities=27% Similarity=0.403 Sum_probs=59.4
Q ss_pred CCCcEEEEcccCCCCCHHHHHHHHHHHHHhcCcEEEEEcCCCccccCCCCCCCCCHHHHHHHHHHHHHhcCCCceEEEE
Q 031699 19 NSYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIKPELVVQTE 97 (154)
Q Consensus 19 ~~~~~v~~gGtFDplH~GH~~ll~~A~~~~~~~viVgvt~~~~~~~k~~~~~i~~~~~R~~~v~~~l~~~~p~~~v~i~ 97 (154)
.+|++++++|||||+|.||+.++++|++++ |+++|+|+.++ .| .++++.++|++|++.++..++ .+.+..+
T Consensus 20 ~~mki~v~~GsFDpiH~GHl~li~~A~~~~-d~viv~v~~~p---~K---~~l~s~eeR~~ml~~~~~~v~-~v~v~~f 90 (187)
T 3k9w_A 20 GSMVVAVYPGTFDPLTRGHEDLVRRASSIF-DTLVVGVADSR---AK---KPFFSLEERLKIANEVLGHYP-NVKVMGF 90 (187)
T ss_dssp CCCCEEEEEECCTTCCHHHHHHHHHHHHHS-SEEEEEEECCG---GG---CCSSCHHHHHHHHHHHHTTCT-TEEEEEE
T ss_pred CCcEEEEEEEeCCcCcHHHHHHHHHHHHHC-CcEEEEEecCC---cc---CCCCCHHHHHHHHHHHhccCC-cEEEEec
Confidence 457899999999999999999999999998 89999998753 33 468999999999999998874 4444433
No 21
>1od6_A PPAT, phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.5A {Thermus thermophilus} SCOP: c.26.1.3
Probab=99.48 E-value=9.9e-14 Score=103.56 Aligned_cols=66 Identities=23% Similarity=0.464 Sum_probs=52.6
Q ss_pred EEEcccCCCCCHHHHHHHHHHHHHhcCcEEEEEcCCCccccCCCCCCCCCHHHHHHHHHHHHHhcCCCceEE
Q 031699 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIKPELVVQ 95 (154)
Q Consensus 24 v~~gGtFDplH~GH~~ll~~A~~~~~~~viVgvt~~~~~~~k~~~~~i~~~~~R~~~v~~~l~~~~p~~~v~ 95 (154)
+++||||||+|.||+.++++|++.+ ++++++++.++ .|+ ..++.+.++|++|++.++..++ .+.+.
T Consensus 3 ~v~~GsFdp~H~GH~~l~~~a~~~~-d~v~v~~~~~p---~k~-~~~~~~~~~R~~ml~~a~~~~~-~v~v~ 68 (160)
T 1od6_A 3 VVYPGSFDPLTNGHLDVIQRASRLF-EKVTVAVLENP---SKR-GQYLFSAEERLAIIREATAHLA-NVEAA 68 (160)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHS-SEEEEEEECC---------CCSSCHHHHHHHHHHHTTTCT-TEEEE
T ss_pred EEEEeeeCCCCHHHHHHHHHHHHHC-CEEEEEEcCCC---CCC-CCCCCCHHHHHHHHHHHhcCCC-CEEEE
Confidence 8999999999999999999999998 78999998653 232 1357899999999999988764 34443
No 22
>1kqn_A Nmnat, nicotinamide mononucleotide adenylyl transferase; nucleotidyltransferase superfamily; HET: NAD; 2.20A {Homo sapiens} SCOP: c.26.1.3 PDB: 1kqo_A* 1kr2_A* 1kku_A 1gzu_A*
Probab=99.48 E-value=1.8e-14 Score=118.25 Aligned_cols=89 Identities=15% Similarity=0.087 Sum_probs=69.3
Q ss_pred CCcEEEEcccCCCCCHHHHHHHHHHHHHhc-C---cEEEEE---cCCCccccCCCCCCCCCHHHHHHHHHHHHHhcCCCc
Q 031699 20 SYGAVVLGGTFDRLHDGHRLFLKASAELAR-D---RIVVGV---CDGPMLTNKQFAELIQPVDERMRNVEAYIKSIKPEL 92 (154)
Q Consensus 20 ~~~~v~~gGtFDplH~GH~~ll~~A~~~~~-~---~viVgv---t~~~~~~~k~~~~~i~~~~~R~~~v~~~l~~~~p~~ 92 (154)
..+++++||||||+|.||+.++++|++.+. + .+++++ +..+ +.| ..+.+.++|++|++.++... +.+
T Consensus 7 ~~~i~i~gGsFDPiH~GHl~l~~~a~~~~~~d~~~~vvv~~f~P~~~~--~~K---~~l~s~~~R~~ml~~ai~~~-~~~ 80 (279)
T 1kqn_A 7 TEVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDA--YKK---KGLIPAYHRVIMAELATKNS-KWV 80 (279)
T ss_dssp EEEEEEEEECCTTCCHHHHHHHHHHHHHHHHTSSEEEEEEEEEECCGG--GCC---TTCCCHHHHHHHHHHHTTTC-SSE
T ss_pred CceEEEEEeeecHhhHHHHHHHHHHHHHhcccCCceEEEEEEcCCCCC--ccc---cCCCCHHHHHHHHHHHhcCC-CcE
Confidence 467899999999999999999999998863 3 265433 3332 223 34689999999999999886 467
Q ss_pred eEEEEEccCCCCCccccccccee
Q 031699 93 VVQTEPITDPYGPSIVDENLEAI 115 (154)
Q Consensus 93 ~v~i~ei~d~~gps~t~~~l~~l 115 (154)
.++.+|+ +..|++||.++++.+
T Consensus 81 ~v~~~E~-~~~~~syTidtL~~l 102 (279)
T 1kqn_A 81 EVDTWES-LQKEWKETLKVLRHH 102 (279)
T ss_dssp EECCTGG-GCSSCCCHHHHHHHH
T ss_pred EEecccc-ccCCCCcHHHHHHHH
Confidence 7777777 678999999888765
No 23
>2b7l_A Glycerol-3-phosphate cytidylyltransferase; rossmann fold; 3.00A {Staphylococcus aureus}
Probab=99.48 E-value=3.1e-14 Score=103.65 Aligned_cols=65 Identities=25% Similarity=0.361 Sum_probs=52.8
Q ss_pred CcEEEEcccCCCCCHHHHHHHHHHHHHhcCcEEEEEcCCCccccCCCCCCCCCHHHHHHHHHHHHHhc
Q 031699 21 YGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSI 88 (154)
Q Consensus 21 ~~~v~~gGtFDplH~GH~~ll~~A~~~~~~~viVgvt~~~~~~~k~~~~~i~~~~~R~~~v~~~l~~~ 88 (154)
|++++++|+|||+|.||+.++++|++++ ++++|+++.++....+. +.++.+.++|.+|++ .+..+
T Consensus 1 m~~~~~~G~FDp~H~GH~~li~~a~~~~-~~~~v~v~~~~~~~~~~-~~~l~~~~eR~~~l~-~~~~~ 65 (132)
T 2b7l_A 1 MKRVITYGTYDLLHYGHIELLRRAREMG-DYLIVALSTDEFNQIKH-KKSYYDYEQRKMMLE-SIRYV 65 (132)
T ss_dssp CCEEEEEECCCSCCHHHHHHHHHHHHTS-SEEEEEEECHHHHHHTT-CCCSSCHHHHHHHHH-TBTTC
T ss_pred CeEEEEeeecCcCCHHHHHHHHHHHHhC-CcEEEEEECCHHHhccC-CCCCCCHHHHHHHHH-hcCCC
Confidence 4689999999999999999999999998 68999999876432222 256899999999999 44433
No 24
>1coz_A Protein (glycerol-3-phosphate cytidylyltransferase); HET: CTP; 2.00A {Bacillus subtilis} SCOP: c.26.1.2 PDB: 1n1d_A*
Probab=99.47 E-value=2.1e-14 Score=104.01 Aligned_cols=65 Identities=29% Similarity=0.406 Sum_probs=52.6
Q ss_pred CcEEEEcccCCCCCHHHHHHHHHHHHHhcCcEEEEEcCCCccccCCCCCCCCCHHHHHHHHHHHHHhc
Q 031699 21 YGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSI 88 (154)
Q Consensus 21 ~~~v~~gGtFDplH~GH~~ll~~A~~~~~~~viVgvt~~~~~~~k~~~~~i~~~~~R~~~v~~~l~~~ 88 (154)
|++++++|+|||+|.||+.++++|++.+ ++++|+++.++....|. +.++.+.++|.+|++. +..+
T Consensus 1 m~~~~~~G~FDp~H~GH~~li~~a~~~~-d~~~v~v~~~~~~~~~~-~~~l~~~~eR~~~l~~-~~~~ 65 (129)
T 1coz_A 1 MKKVITYGTFDLLHWGHIKLLERAKQLG-DYLVVAISTDEFNLQKQ-KKAYHSYEHRKLILET-IRYV 65 (129)
T ss_dssp CCEEEEEECCCSCCHHHHHHHHHHHTTS-SEEEEEEECHHHHHHHT-CCCSSCHHHHHHHHTT-BTTC
T ss_pred CcEEEEEEeCCCCCHHHHHHHHHHHHhC-CCeEEEEECCHHHhcCC-CCCCCCHHHHHHHHHh-cCCC
Confidence 4689999999999999999999999998 78999999876322222 2568999999999994 4433
No 25
>1f9a_A Hypothetical protein MJ0541; alpha/beta, transferase, structural genomics; HET: ATP; 2.00A {Methanocaldococcus jannaschii} SCOP: c.26.1.3
Probab=99.45 E-value=1.3e-13 Score=104.62 Aligned_cols=62 Identities=24% Similarity=0.335 Sum_probs=52.0
Q ss_pred EEEEcccCCCCCHHHHHHHHHHHHHhcCcEEEEE-cCCCccccCCCCCCCCCHHHHHHHHHHHHHhcC
Q 031699 23 AVVLGGTFDRLHDGHRLFLKASAELARDRIVVGV-CDGPMLTNKQFAELIQPVDERMRNVEAYIKSIK 89 (154)
Q Consensus 23 ~v~~gGtFDplH~GH~~ll~~A~~~~~~~viVgv-t~~~~~~~k~~~~~i~~~~~R~~~v~~~l~~~~ 89 (154)
++++||||||+|.||+.++++|++.+ |+++|++ +.++. .|+ ....+.++|++|++.++....
T Consensus 2 i~i~~GsFdp~H~GH~~l~~~a~~~~-d~v~v~v~~~~~p--~~~--~~~~~~~~R~~m~~~~~~~~~ 64 (168)
T 1f9a_A 2 RGFIIGRFQPFHKGHLEVIKKIAEEV-DEIIIGIGSAQKS--HTL--ENPFTAGERILMITQSLKDYD 64 (168)
T ss_dssp EEEEEECCTTCCHHHHHHHHHHTTTC-SEEEEEECSTTCC--SSS--SCCSCHHHHHHHHHHHHTTSS
T ss_pred EEEEEEecCCcCHHHHHHHHHHHHhC-CeEEEEEcCCCCC--CCC--CCCCCHHHHHHHHHHHHhcCC
Confidence 79999999999999999999999987 8899988 66553 232 234799999999999999873
No 26
>3hl4_A Choline-phosphate cytidylyltransferase A; rossmann fold, phospholipid synthesis, phosphatidylcholine, phosphocholine, CTP, CDP-choline; HET: CDC; 2.20A {Rattus norvegicus}
Probab=99.42 E-value=9.1e-14 Score=111.92 Aligned_cols=66 Identities=27% Similarity=0.394 Sum_probs=55.3
Q ss_pred CCCCCcEEEEcccCCCCCHHHHHHHHHHHHHh-cCcEEEEEcCCCccccCCCCCCCCCHHHHHHHHHH
Q 031699 17 PDNSYGAVVLGGTFDRLHDGHRLFLKASAELA-RDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEA 83 (154)
Q Consensus 17 ~~~~~~~v~~gGtFDplH~GH~~ll~~A~~~~-~~~viVgvt~~~~~~~k~~~~~i~~~~~R~~~v~~ 83 (154)
+...+.+|++.||||++|.||+.+|++|++++ .++|+|||++++.....+ ..++++.++|.+|++.
T Consensus 72 ~~~~~~~V~~~GtFD~~H~GHl~iL~rAk~lf~gD~LIVgV~~D~~v~~~K-g~pi~s~eER~e~v~~ 138 (236)
T 3hl4_A 72 PCERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFK-GFTVMNENERYDAVQH 138 (236)
T ss_dssp CTTSCEEEEEEECCTTCCHHHHHHHHHHHTSSSSEEEEEEECCHHHHHHHT-CCCSSCHHHHHHHHHT
T ss_pred CCCCCeEEEEeccCCCCCHHHHHHHHHHHHhcCCCeEEEEEcccHHHhhcC-CCCCCCHHHHHHHHHH
Confidence 34567789999999999999999999999996 379999999887553222 2579999999999996
No 27
>1ej2_A Nicotinamide mononucleotide adenylyltransferase; dinucleotide binding fold, structural genomics, PSI; HET: NAD; 1.90A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.26.1.3 PDB: 1m8g_A* 1hyb_A* 1m8j_A* 1m8f_A* 1m8k_A*
Probab=99.39 E-value=6.6e-13 Score=101.76 Aligned_cols=62 Identities=16% Similarity=0.186 Sum_probs=52.0
Q ss_pred cEEEEcccCCCCCHHHHHHHHHHHHHhcCcEEEEE-cCCCccccCCCCCCCCCHHHHHHHHHHHHHhc
Q 031699 22 GAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGV-CDGPMLTNKQFAELIQPVDERMRNVEAYIKSI 88 (154)
Q Consensus 22 ~~v~~gGtFDplH~GH~~ll~~A~~~~~~~viVgv-t~~~~~~~k~~~~~i~~~~~R~~~v~~~l~~~ 88 (154)
+++++||||||+|.||+.++++|++.+ ++++|++ +.++ +.|+ ....+.++|++|++.++...
T Consensus 4 ~~~i~~G~Fdp~H~GH~~l~~~a~~~~-d~v~v~v~~~~~--p~~~--~~~~~~~~R~~~~~~a~~~~ 66 (181)
T 1ej2_A 4 MRGLLVGRMQPFHRGHLQVIKSILEEV-DELIICIGSAQL--SHSI--RDPFTAGERVMMLTKALSEN 66 (181)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHTTTC-SEEEEEECSTTC--CSSS--SSCSCHHHHHHHHHHHHHHT
T ss_pred eEEEEEEEcCCcCHHHHHHHHHHHHhC-CeeEEEECCCCC--CcCC--CCCCCHHHHHHHHHHHHhhC
Confidence 589999999999999999999999987 7899988 5554 2332 33579999999999999875
No 28
>3elb_A Ethanolamine-phosphate cytidylyltransferase; kennedy pathway, CMP, CTP, phosphoethanolamine, cytidylyltra SGC, structural genomics consortium; HET: C5P; 2.00A {Homo sapiens}
Probab=99.38 E-value=2e-13 Score=115.15 Aligned_cols=70 Identities=27% Similarity=0.347 Sum_probs=58.1
Q ss_pred CCCCCcEEEEcccCCCCCHHHHHHHHHHHHHhcC--cEEEEEcCCCccc-cCCCCCCCCCHHHHHHHHHHHHHhc
Q 031699 17 PDNSYGAVVLGGTFDRLHDGHRLFLKASAELARD--RIVVGVCDGPMLT-NKQFAELIQPVDERMRNVEAYIKSI 88 (154)
Q Consensus 17 ~~~~~~~v~~gGtFDplH~GH~~ll~~A~~~~~~--~viVgvt~~~~~~-~k~~~~~i~~~~~R~~~v~~~l~~~ 88 (154)
+....+++++.|||||+|.||+.+|++|++++ | +|+|||++|+.+. .|+...|+++.+||.+++++ +..+
T Consensus 194 ~~~~~~iv~~~GsFD~~h~GHl~~L~rA~~l~-D~~~LiVgV~~d~~v~~~Kg~~~pi~~~~ER~~~v~~-~~~v 266 (341)
T 3elb_A 194 PQPGETVIYVAGAFDLFHIGHVDFLEKVHRLA-ERPYIIAGLHFDQEVNHYKGKNYPIMNLHERTLSVLA-CRYV 266 (341)
T ss_dssp CCTTCEEEEEEECCTTCCHHHHHHHHHHHTTS-SSEEEEEEEECHHHHHHHHCTTCCSSCHHHHHHHHHT-BTTC
T ss_pred CCCCCEEEEEecccCCCCHHHHHHHHHHHHhC-CCCEEEEEEccCHhhHhhcCCCCCCCCHHHHHHHHHH-cCCC
Confidence 44567799999999999999999999999999 8 9999999987553 34323689999999999995 4444
No 29
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.34 E-value=6.1e-13 Score=109.15 Aligned_cols=78 Identities=21% Similarity=0.193 Sum_probs=58.8
Q ss_pred CCcEEEEcccCCCCCHHHHHHHHHHHHHhcCcEEEEEcCCCccccCCCCCCCCCHHHHHHHHHHHHHhcCCCceEEEEEc
Q 031699 20 SYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIKPELVVQTEPI 99 (154)
Q Consensus 20 ~~~~v~~gGtFDplH~GH~~ll~~A~~~~~~~viVgvt~~~~~~~k~~~~~i~~~~~R~~~v~~~l~~~~p~~~v~i~ei 99 (154)
+|+++++||||||+|.||+.++++|++.+ ++++|+++++....+|+ ...+.++|++|++.++.... .-++.++..
T Consensus 6 ~~~~~i~~G~FdP~H~GH~~li~~a~~~~-d~v~v~v~~~~~p~~~~---~~~~~~~R~~m~~~~~~~~~-~~~~~~i~~ 80 (341)
T 2qjo_A 6 KYQYGIYIGRFQPFHLGHLRTLNLALEKA-EQVIIILGSHRVAADTR---NPWRSPERMAMIEACLSPQI-LKRVHFLTV 80 (341)
T ss_dssp SEEEEEEEECCTTCCHHHHHHHHHHHHHE-EEEEEEEEEETCCCCSS---SCSCHHHHHHHHHTTSCHHH-HTTEEEEEE
T ss_pred eeeEEEEEEEeCCCCHHHHHHHHHHHHhC-CeEEEEECCcccCCCCC---CCCCHHHHHHHHHHHhhhcc-CCeEEEEEC
Confidence 46899999999999999999999999998 78888887654322222 23899999999998776541 123555555
Q ss_pred cCC
Q 031699 100 TDP 102 (154)
Q Consensus 100 ~d~ 102 (154)
.|.
T Consensus 81 ~d~ 83 (341)
T 2qjo_A 81 RDW 83 (341)
T ss_dssp ECC
T ss_pred CCC
Confidence 554
No 30
>3elb_A Ethanolamine-phosphate cytidylyltransferase; kennedy pathway, CMP, CTP, phosphoethanolamine, cytidylyltra SGC, structural genomics consortium; HET: C5P; 2.00A {Homo sapiens}
Probab=99.32 E-value=1.1e-12 Score=110.65 Aligned_cols=63 Identities=24% Similarity=0.372 Sum_probs=54.3
Q ss_pred CCCcEEEEcccCCCCCHHHHHHHHHHHHHhcCcEEEEEcCCCccccCCCCCCCCCHHHHHHHHHH
Q 031699 19 NSYGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEA 83 (154)
Q Consensus 19 ~~~~~v~~gGtFDplH~GH~~ll~~A~~~~~~~viVgvt~~~~~~~k~~~~~i~~~~~R~~~v~~ 83 (154)
.+++++++.|+||++|.||+.+|++|++++ ++++||+++++.....+ ..++++.++|.+++++
T Consensus 5 ~~~~~v~~~G~FD~lH~GH~~lL~~A~~l~-d~LiVgV~~d~~v~~~K-~~pi~s~eER~~~l~~ 67 (341)
T 3elb_A 5 RRAVRVWCDGCYDMVHYGHSNQLRQARAMG-DYLIVGVHTDEEIAKHK-GPPVFTQEERYKMVQA 67 (341)
T ss_dssp CCCCEEEEEECCCSCCHHHHHHHHHHHHTS-SEEEEEECCHHHHHHHS-SCCSSCHHHHHHHHHH
T ss_pred CCceEEEEEeeCCCCCHHHHHHHHHHHHhC-CcCEEEeecCHHHhccC-CCCCCCHHHHHHHHHH
Confidence 457789999999999999999999999999 78999999987543222 2589999999999997
No 31
>1jhd_A Sulfate adenylyltransferase; sulfurylase, APS, chemoautotroph, bromide; 1.70A {Sulfur-oxidizing endosymbiont ofriftia pachyptila} SCOP: b.122.1.3 c.26.1.5
Probab=98.64 E-value=3.9e-08 Score=84.34 Aligned_cols=83 Identities=20% Similarity=0.163 Sum_probs=62.4
Q ss_pred CcEEEEcccCCCCCHHHHHHHHHHHHHhc-CcEEEEEcCCCccccCCCCCCCCCHHHHHHHHHHHHHhcCCC--ceEEEE
Q 031699 21 YGAVVLGGTFDRLHDGHRLFLKASAELAR-DRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIKPE--LVVQTE 97 (154)
Q Consensus 21 ~~~v~~gGtFDplH~GH~~ll~~A~~~~~-~~viVgvt~~~~~~~k~~~~~i~~~~~R~~~v~~~l~~~~p~--~~v~i~ 97 (154)
.+.|+.+|||||+|.||..+++.|++... |.|++.++..+ .| ....+.+.|++|++.+++..-|. +.+.++
T Consensus 192 w~~VvafqTrNPiHrgH~~l~~~Ale~~~~D~vll~P~~g~---~K---~~di~~~~R~~~~~~~~~~~~p~~~v~l~~~ 265 (396)
T 1jhd_A 192 WSKVVAFQTRNPMHRAHEELCRMAMESLDADGVVVHMLLGK---LK---KGDIPAPVRDAAIRTMAEVYFPPNTVMVTGY 265 (396)
T ss_dssp CSSEEEEEESSCCCHHHHHHHHHHHHHHTCSEEEEEEEECC---CC---TTCCCHHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred CceEEEeccCCCCchHHHHHHHHHHHHcCCCeEEEEECCCC---CC---CCCCCHHHHHHHHHHHHHhcCCCcceEEEec
Confidence 45677799999999999999999999863 67887777553 22 23489999999999999985233 446677
Q ss_pred EccC-CCCCcccc
Q 031699 98 PITD-PYGPSIVD 109 (154)
Q Consensus 98 ei~d-~~gps~t~ 109 (154)
++.- .-||+++.
T Consensus 266 p~~m~~aGPreai 278 (396)
T 1jhd_A 266 GFDMLYAGPREAV 278 (396)
T ss_dssp ECCCCCCTHHHHH
T ss_pred hHHhhcCCchHHH
Confidence 7643 36888764
No 32
>1v47_A ATP sulfurylase; product binding complex, zinc, riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; HET: ADX; 2.49A {Thermus thermophilus} SCOP: b.122.1.3 c.26.1.5
Probab=98.51 E-value=8.7e-08 Score=80.89 Aligned_cols=81 Identities=22% Similarity=0.219 Sum_probs=60.0
Q ss_pred CcEEEEcccCCCCCHHHHHHHHHHHHHhcCcEEEEEcCCCccccCCCCCCCCCHHHHHHHHHHHHHhcCCCc--eEEEEE
Q 031699 21 YGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIKPEL--VVQTEP 98 (154)
Q Consensus 21 ~~~v~~gGtFDplH~GH~~ll~~A~~~~~~~viVgvt~~~~~~~k~~~~~i~~~~~R~~~v~~~l~~~~p~~--~v~i~e 98 (154)
.+.|+..|||||+|.||..++++|++.. +.|++.+...+ .| ....+.+.|++|++.+++..-|.. .+.+.+
T Consensus 155 w~~VvafqTrNPiHrgH~~l~~~ale~~-d~vll~P~~g~---~K---~~d~~~~~R~~~~~~~i~~~~p~~~~~l~~~p 227 (349)
T 1v47_A 155 WRKVVAFQTRNAPHRAHEYLIRLGLELA-DGVLVHPILGA---KK---PDDFPTEVIVEAYQALIRDFLPQERVAFFGLA 227 (349)
T ss_dssp CCSEEEEEESSCCCHHHHHHHHHHHHHS-SEEEEEEBCSC---CC---TTSCCHHHHHHHHHHHHHHHSCGGGEEECCBC
T ss_pred CCeEEEeecCCCCchHHHHHHHHHHHhC-CcEEEEECCCC---CC---CCCCCHHHHHHHHHHHHhhcCCCcceEEEech
Confidence 3556668999999999999999999985 88888887654 22 234899999999999999863442 244455
Q ss_pred ccC-CCCCccc
Q 031699 99 ITD-PYGPSIV 108 (154)
Q Consensus 99 i~d-~~gps~t 108 (154)
+.- .-||+++
T Consensus 228 ~~m~~aGPrea 238 (349)
T 1v47_A 228 TPMRYAGPKEA 238 (349)
T ss_dssp SCCCCCTHHHH
T ss_pred HHhhcCCcHHH
Confidence 432 3577765
No 33
>2x0k_A Riboflavin biosynthesis protein RIBF; riboflavin kinase, nucleotide-binding, transferase, ATP-BIND multifunctional enzyme; 1.95A {Corynebacterium ammoniagenes}
Probab=98.48 E-value=2.5e-07 Score=77.66 Aligned_cols=123 Identities=24% Similarity=0.214 Sum_probs=75.4
Q ss_pred cEEEEcccCCCCCHHHHHHHHHHHHHhc--CcEEEEEcCCCc----cccCCCCCCCCCHHHHHHHHHHHHHhcCCCceEE
Q 031699 22 GAVVLGGTFDRLHDGHRLFLKASAELAR--DRIVVGVCDGPM----LTNKQFAELIQPVDERMRNVEAYIKSIKPELVVQ 95 (154)
Q Consensus 22 ~~v~~gGtFDplH~GH~~ll~~A~~~~~--~~viVgvt~~~~----~~~k~~~~~i~~~~~R~~~v~~~l~~~~p~~~v~ 95 (154)
..+++.|+||.+|.||..|+++|.+.+. +...+++|.++. +...+...++.+.++|+++++.. .++ .+-
T Consensus 16 ~~vvtiG~FDGvH~GHq~Li~~a~~~a~~~~~~~vvvtFdphP~~v~~~~~~~~~L~~~~eR~~ll~~~--gVD---~v~ 90 (338)
T 2x0k_A 16 NSAVTIGVFDGVHRGHQKLINATVEKAREVGAKAIMVTFDPHPVSVFLPRRAPLGITTLAERFALAESF--GID---GVL 90 (338)
T ss_dssp CEEEEESCCTTCCHHHHHHHHHHHHHHHHHTCEEEEEEESSCHHHHHSTTCSCCBSSCHHHHHHHHHHT--TCS---EEE
T ss_pred CeEEEEEeCCcccHHHHHHHHHHHHHHHHcCCcEEEEEecCCHHHHcCCccCCCCCCCHHHHHHHHHhc--CCC---EEE
Confidence 4799999999999999999999999873 234667776652 11111134589999999999873 232 222
Q ss_pred EEEccCC---CCCcccc-------cccceeeehhhhhccH---HHHHHHHHHCCCCceeEEEeeeecC
Q 031699 96 TEPITDP---YGPSIVD-------ENLEAIVVSKETLPGG---LSVNKKRADRGLSQLKVWVPVLVVP 150 (154)
Q Consensus 96 i~ei~d~---~gps~t~-------~~l~~lVvs~Et~~~~---~~iN~~R~~~gl~~l~i~~i~~v~~ 150 (154)
+.+.+.. ..|.... -.++.+||..+..-|. ..+..++....- -+++++||.+..
T Consensus 91 v~~F~~~~a~ls~e~Fi~~il~~~l~~~~ivvG~Df~FG~~r~g~~~~L~~~~~~-g~~V~~v~~~~~ 157 (338)
T 2x0k_A 91 VIDFTRELSGTSPEKYVEFLLEDTLHASHVVVGANFTFGENAAGTADSLRQICQS-RLTVDVIDLLDD 157 (338)
T ss_dssp EECTTTSSSSCCHHHHHHHCCCCCTCEEEEEEETTCEESGGGCEEHHHHHHHTTT-TSEEEEECCCEE
T ss_pred EccccHHHHhCCHHHHHHHHHHhhcCCCEEEEeecCCCCCCCCCCHHHHHHHhcC-CeEEEEECcEec
Confidence 3333221 1122111 2458889988876431 124444443322 357888887653
No 34
>1mrz_A Riboflavin kinase/FMN adenylyltransferase; rossmann fold, flavin binding domain, 6-stranded beta barrel nucleotide binding domain; HET: CIT; 1.90A {Thermotoga maritima} SCOP: b.43.5.1 c.26.1.3 PDB: 1s4m_A* 1t6x_A* 1t6y_A* 1t6z_A* 2i1l_A
Probab=98.41 E-value=1.2e-07 Score=78.24 Aligned_cols=114 Identities=23% Similarity=0.234 Sum_probs=69.0
Q ss_pred EEEcccCCCCCHHHHHHHHHHHHHhcC--cEEEEEcCCC---ccccCCCCCCCCCHHHHHHHHHHHHHhcCCCceEEEEE
Q 031699 24 VVLGGTFDRLHDGHRLFLKASAELARD--RIVVGVCDGP---MLTNKQFAELIQPVDERMRNVEAYIKSIKPELVVQTEP 98 (154)
Q Consensus 24 v~~gGtFDplH~GH~~ll~~A~~~~~~--~viVgvt~~~---~~~~k~~~~~i~~~~~R~~~v~~~l~~~~p~~~v~i~e 98 (154)
+++.|+||.+|.||..++++|.+++.. ...+++|.++ .++.+ ...++.|.++|.++++++ . .+-+.+
T Consensus 2 vvtiG~FDgvH~GH~~ll~~a~~~a~~~~~~~vVvtFdphP~~l~~~-~~~~l~~~~eR~~ll~~l----g---~~~v~~ 73 (293)
T 1mrz_A 2 VVSIGVFDGVHIGHQKVLRTMKEIAFFRKDDSLIYTISYPPEYFLPD-FPGLLMTVESRVEMLSRY----A---RTVVLD 73 (293)
T ss_dssp CEEEECCTTCCHHHHHHHHHHHHHHHHHTCCCEEEEESSCGGGGSTT-CCCBSSCHHHHHHHHTTT----S---CEEEEC
T ss_pred EEEEeeCccccHHHHHHHHHHHHHHHHcCCeEEEEEecCCHHHhCCC-CCCCCCCHHHHHHHHHhC----C---CEEEEE
Confidence 578899999999999999999998731 1334555442 22211 135689999999998763 1 111222
Q ss_pred cc--CCCCCcccc----cccceeeehhhhhcc---HHHHHHHHHHCCCCceeEEEeeeec
Q 031699 99 IT--DPYGPSIVD----ENLEAIVVSKETLPG---GLSVNKKRADRGLSQLKVWVPVLVV 149 (154)
Q Consensus 99 i~--d~~gps~t~----~~l~~lVvs~Et~~~---~~~iN~~R~~~gl~~l~i~~i~~v~ 149 (154)
.. ....|.... -..+.+|+..+-.-| ...++.++. .| .+++++|.+.
T Consensus 74 F~~~a~ls~~~Fi~~ill~~~~iVvG~Df~fG~~~~g~~~~L~~-~G---~~V~~v~~~~ 129 (293)
T 1mrz_A 74 FFRIKDLTPEGFVERYLSGVSAVVVGRDFRFGKNASGNASFLRK-KG---VEVYEIEDVV 129 (293)
T ss_dssp HHHHTTCCHHHHHHHHCTTCCEEEEETTCCBSGGGCBCHHHHHH-TT---CEEEEECCCE
T ss_pred hHHhhcCCHHHHHHHHhcCCCEEEECCCCCCCCCCCCCHHHHHh-CC---CEEEEECCEE
Confidence 10 111222111 356788888887643 223666666 44 5677777654
No 35
>2ejc_A Pantoate--beta-alanine ligase; X-RAY diffraction, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Thermotoga maritima}
Probab=98.28 E-value=1.4e-06 Score=71.66 Aligned_cols=62 Identities=18% Similarity=0.272 Sum_probs=44.7
Q ss_pred CcEEEEcccCCCCCHHHHHHHHHHHHHhcCcEEEEEcCCC--ccccCCCCCCCCCHHHHHHHHHHH
Q 031699 21 YGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGP--MLTNKQFAELIQPVDERMRNVEAY 84 (154)
Q Consensus 21 ~~~v~~gGtFDplH~GH~~ll~~A~~~~~~~viVgvt~~~--~~~~k~~~~~i~~~~~R~~~v~~~ 84 (154)
.+++++ ||||-+|.||..|+++|.+.+ +.++|.+.-++ +.++........+.++|.++++..
T Consensus 22 ~~V~~v-gtfdgLH~GH~sLI~~A~~~a-d~vVVSffvnP~qf~~~ed~~~yp~tle~d~~lL~~~ 85 (280)
T 2ejc_A 22 KTIGFV-PTMGYLHEGHLSLVRRARAEN-DVVVVSIFVNPTQFGPNEDYERYPRDFERDRKLLEKE 85 (280)
T ss_dssp CCEEEE-EECSCCCHHHHHHHHHHHHHS-SEEEEEECCCGGGCCTTSCGGGSCCCHHHHHHHHHTT
T ss_pred CEEEEE-cCCccccHHHHHHHHHHHHhC-CEEEEEEeCChHHhcCCcccccCCCCHHHHHHHHHHC
Confidence 346666 899999999999999999998 78888884443 333211112246889999987753
No 36
>3op1_A Macrolide-efflux protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PEG; 2.49A {Streptococcus pneumoniae}
Probab=98.11 E-value=4.4e-06 Score=69.39 Aligned_cols=64 Identities=25% Similarity=0.312 Sum_probs=46.6
Q ss_pred CcEEEEcccCCCCCHHHHHHHHHHHHHhcC--cEEEEEcCCCc----c-c-cCCCCCCCCCHHHHHHHHHHH
Q 031699 21 YGAVVLGGTFDRLHDGHRLFLKASAELARD--RIVVGVCDGPM----L-T-NKQFAELIQPVDERMRNVEAY 84 (154)
Q Consensus 21 ~~~v~~gGtFDplH~GH~~ll~~A~~~~~~--~viVgvt~~~~----~-~-~k~~~~~i~~~~~R~~~v~~~ 84 (154)
...+++-|+||-+|.||..++++|.+.+.. .-.+.+|-++- + + ..+....+.+.++|+++++.+
T Consensus 20 ~~~vvtiG~FDGvH~GHq~li~~a~~~a~~~~~~~vV~TFdphP~~v~~~~~~~~~~~Lt~~~eK~~ll~~l 91 (308)
T 3op1_A 20 SDSVVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVMTFNESPKIALEPYHPDLFLHILNPAERERKLKRE 91 (308)
T ss_dssp SCEEEEESCCSSCCHHHHHHHHHHHHHSSTTCCCEEEEEESSCTHHHHSCCCGGGGCBSSCHHHHHHHHHHH
T ss_pred CCeEEEEecCCcccHHHHHHHHHHHHHHHhcCCceEEEEecCCHHHHhCccccCCcccCCCHHHHHHHHHHc
Confidence 457999999999999999999999999842 12455665541 1 1 111235689999999998874
No 37
>3gmi_A UPF0348 protein MJ0951; protein with unknown function, structural genomics, PSI, MCS protein structure initiative; 1.91A {Methanocaldococcus jannaschii}
Probab=98.02 E-value=1.5e-05 Score=67.39 Aligned_cols=60 Identities=13% Similarity=-0.004 Sum_probs=44.7
Q ss_pred CcEEEEcccCCCCCHHHHHHHHHHHHHhcCcEEEEEcCCCc-cccCCCCCCCCCHHHHHHHHHHH
Q 031699 21 YGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPM-LTNKQFAELIQPVDERMRNVEAY 84 (154)
Q Consensus 21 ~~~v~~gGtFDplH~GH~~ll~~A~~~~~~~viVgvt~~~~-~~~k~~~~~i~~~~~R~~~v~~~ 84 (154)
.+.+++-|.||++|.||..++++|.+ . +.+++..|.... +.. + ...+.+..+|.+++...
T Consensus 52 ~~~v~~lG~FDg~H~GHq~lI~~a~~-~-~~~~~Vms~~~~~vqr-g-~~~l~~~~~R~~~~~~~ 112 (357)
T 3gmi_A 52 DKIVCDFTEYNPLHKGHKYALEKGKE-H-GIFISVLPGPLERSGR-G-IPYFLNRYIRAEMAIRA 112 (357)
T ss_dssp CCEEEEECCCTTCCHHHHHHHHHHHT-S-SEEEEEECCTTSBCTT-S-SBCSSCHHHHHHHHHHH
T ss_pred CCEEEEEEecCccCHHHHHHHHHHHH-c-CCeEEEEcCchHHhcC-C-CCcCCCHHHHHHHHHHC
Confidence 56899999999999999999999998 3 444444454331 321 1 34678999999999886
No 38
>1v8f_A Pantoate-beta-alanine ligase; rossmann fold, dimer, structural genomics, riken STR genomics/proteomics initiative, RSGI; HET: P6G; 1.90A {Thermus thermophilus} SCOP: c.26.1.4 PDB: 1ufv_A
Probab=97.34 E-value=0.00061 Score=55.75 Aligned_cols=58 Identities=17% Similarity=0.225 Sum_probs=42.5
Q ss_pred EEEEcccCCCCCHHHHHHHHHHHHHhcCcEEEEEcCCCc--cccCCCCCCCCCHHHHHHHHHHH
Q 031699 23 AVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPM--LTNKQFAELIQPVDERMRNVEAY 84 (154)
Q Consensus 23 ~v~~gGtFDplH~GH~~ll~~A~~~~~~~viVgvt~~~~--~~~k~~~~~i~~~~~R~~~v~~~ 84 (154)
.|.+-|. +|.||..|+++|.+.+ +.++|.+..++. .+.........++++|.+.++.+
T Consensus 21 ~VpTmG~---lH~GH~~Li~~A~~~a-~~vVvsff~nP~qf~~~ed~~~yp~tle~d~~ll~~~ 80 (276)
T 1v8f_A 21 FVPTMGY---LHRGHLALVERARREN-PFVVVSVFVNPLQFGPGEDYHRYPRDLERDRALLQEA 80 (276)
T ss_dssp EEEECSS---CCHHHHHHHHHHHHHC-SEEEEEECCCGGGCCTTSSTTTSCCCHHHHHHHHHHT
T ss_pred EEEeCCC---ccHHHHHHHHHHHHhC-CEEEEEEECCHHHhCCCcccCCCCcCHHHHHHHHHhC
Confidence 3556666 9999999999999998 788888876653 22221123468999999988763
No 39
>3ag6_A Pantothenate synthetase; ATP-dependent enzyme, ATP-binding, nucleotide-binding, pantothenate biosynthesis; HET: PAJ PG4; 1.85A {Staphylococcus aureus} PDB: 3ag5_A* 2x3f_A*
Probab=95.80 E-value=0.028 Score=45.98 Aligned_cols=59 Identities=25% Similarity=0.372 Sum_probs=40.7
Q ss_pred cEEE--EcccCCCCCHHHHHHHHHHHHHhcCcEEEEEcCCCc--cccCCCCCCCCCHHHHHHHHHHH
Q 031699 22 GAVV--LGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPM--LTNKQFAELIQPVDERMRNVEAY 84 (154)
Q Consensus 22 ~~v~--~gGtFDplH~GH~~ll~~A~~~~~~~viVgvt~~~~--~~~k~~~~~i~~~~~R~~~v~~~ 84 (154)
++++ +-|. +|.||..|+++|.+.+ +.++|.+--++. .++........+.+++.+.++..
T Consensus 24 ~I~fVpTmG~---lH~GH~~LI~~a~~~a-~~vVvsffvnP~qf~~~ed~~~yprtle~d~~ll~~~ 86 (283)
T 3ag6_A 24 TIGFIPTMGA---LHDGHLTMVRESVSTN-DITIVSVFVNPLQFGPNEDFDAYPRQIDKDLELVSEV 86 (283)
T ss_dssp CEEEEEECSS---CCHHHHHHHHHHHTTS-SEEEEEECCCGGGCCTTSSTTTSCCCHHHHHHHHHHH
T ss_pred cEEEEECCcc---ccHHHHHHHHHHHHhC-CEEEEEEeCChhhcCCccccccCCCCHHHHHHHHHhC
Confidence 4555 6664 9999999999999988 667766654432 22211122357899999988864
No 40
>1r6x_A ATP:sulfate adenylyltransferase; APS kinase-like domain; 1.40A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5
Probab=95.48 E-value=0.049 Score=46.49 Aligned_cols=63 Identities=22% Similarity=0.194 Sum_probs=44.0
Q ss_pred CcEEEEcccCCCCCHHHHHHHHHHHHHhcCcEEEEEcCCCccccCCCCCCCCCHHHHHHHHHHHHHhcC
Q 031699 21 YGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIK 89 (154)
Q Consensus 21 ~~~v~~gGtFDplH~GH~~ll~~A~~~~~~~viVgvt~~~~~~~k~~~~~i~~~~~R~~~v~~~l~~~~ 89 (154)
-+.|+...|+||+|.||..++.+++....+.|+|-+.-.. .| .--.+.+.|.+..+.+++...
T Consensus 187 w~~VvafqtrNP~HraH~e~~~r~a~e~~~~lllhPlvG~---tK---~~Dip~~vR~~~~~~~l~~yp 249 (395)
T 1r6x_A 187 WDRVVAFQTRNPMHRAHRELTVRAAREANAKVLIHPVVGL---TK---PGDIDHHTRVRVYQEIIKRYP 249 (395)
T ss_dssp CCCEEEECCSSCCCHHHHHHHHHHHHHTTCEEEECCBCSB---CC---TTCCCHHHHHHHHHHHGGGSS
T ss_pred CCcEEEeccCCCcchhhHHHHHHHHHHcCCcEEEEECCCC---CC---CCCCCHHHHHHHHHHHHHhCC
Confidence 3567778899999999966666655553355665443332 12 233899999999999999873
No 41
>1g8f_A Sulfate adenylyltransferase; alpha-beta protein, beta-barrel, rossmann-fold, kinase fold; 1.95A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1g8g_A* 1g8h_A* 1j70_A 1jec_A 1jed_A* 1jee_A*
Probab=95.42 E-value=0.092 Score=46.05 Aligned_cols=63 Identities=22% Similarity=0.194 Sum_probs=44.6
Q ss_pred CcEEEEcccCCCCCHHHHHHHHHHHHHhcCcEEEEEcCCCccccCCCCCCCCCHHHHHHHHHHHHHhcC
Q 031699 21 YGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIK 89 (154)
Q Consensus 21 ~~~v~~gGtFDplH~GH~~ll~~A~~~~~~~viVgvt~~~~~~~k~~~~~i~~~~~R~~~v~~~l~~~~ 89 (154)
-+.++...|+||+|.||..++.+++....+.|+|-+.-.. .| ..-.+.+.|.+..+.+++...
T Consensus 188 w~~v~afqtrnP~HraH~e~~~~~a~e~~~~lll~pl~g~---~k---~~di~~~~r~~~~~~~~~~yp 250 (511)
T 1g8f_A 188 WDRVVAFQTRNPMHRAHRELTVRAAREANAKVLIHPVVGL---TK---PGDIDHHTRVRVYQEIIKRYP 250 (511)
T ss_dssp CCCEEEEEESSCCCHHHHHHHHHHHHHHTCEEEEEEBCSB---CS---TTCCCHHHHHHHHHHHGGGSC
T ss_pred CCcEEEEecCCCCchHHHHHHHHHHHHcCCcEEEEECCCC---CC---CCCCCHHHHHHHHHHHHHhCC
Confidence 3457778899999999965555555443366776665432 12 223899999999999999873
No 42
>3q12_A Pantoate--beta-alanine ligase; structural genomics, center for structural genomics of infec diseases, csgid; HET: PAF; 1.58A {Yersinia pestis} SCOP: c.26.1.4 PDB: 3q10_A* 3mue_A 1iho_A 3guz_A*
Probab=95.23 E-value=0.017 Score=47.38 Aligned_cols=36 Identities=28% Similarity=0.433 Sum_probs=29.7
Q ss_pred CcEEE--EcccCCCCCHHHHHHHHHHHHHhcCcEEEEEcCCC
Q 031699 21 YGAVV--LGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGP 60 (154)
Q Consensus 21 ~~~v~--~gGtFDplH~GH~~ll~~A~~~~~~~viVgvt~~~ 60 (154)
.++++ +-|. +|.||+.|+++|++.+ |.++|.+=-++
T Consensus 25 ~~IgfVPTMG~---LH~GHlsLv~~Ar~~~-d~vVVSIFVNP 62 (287)
T 3q12_A 25 KRIALVPTMGN---LHEGHMTLVDEAKTRA-DVVVVTIFVNP 62 (287)
T ss_dssp CCEEEEEECSS---CCHHHHHHHHHHHTTS-SEEEEEECCCG
T ss_pred CeEEEEcCCCc---ccHHHHHHHHHHHHhC-CEEEEEeccCc
Confidence 46777 6675 9999999999999988 89999885544
No 43
>3cov_A Pantothenate synthetase; pantothenate biosynthesis, enzym ligase, drug design, ATP-binding, magnesium, metal-binding; 1.50A {Mycobacterium tuberculosis} SCOP: c.26.1.4 PDB: 3cow_A* 3coy_A* 3coz_A* 3imc_A* 3ime_A* 3img_A* 3iob_A* 3ioc_A* 3iod_A* 3ioe_A* 3iub_A* 3iue_A* 3ivc_A* 3ivg_A* 3ivx_A* 2a84_A* 1n2b_A* 1n2e_A* 1n2g_A* 1n2h_A* ...
Probab=95.01 E-value=0.024 Score=46.86 Aligned_cols=60 Identities=23% Similarity=0.365 Sum_probs=40.6
Q ss_pred EEEcccCCCCCHHHHHHHHHHHH-HhcCcEEEEEcCCCc--cccCCCCCCCCCHHHHHHHHHHH
Q 031699 24 VVLGGTFDRLHDGHRLFLKASAE-LARDRIVVGVCDGPM--LTNKQFAELIQPVDERMRNVEAY 84 (154)
Q Consensus 24 v~~gGtFDplH~GH~~ll~~A~~-~~~~~viVgvt~~~~--~~~k~~~~~i~~~~~R~~~v~~~ 84 (154)
+.+-.|+.-+|.||..|+++|.+ .+ +.++|.+--++. .++........+.+++.+.+++.
T Consensus 35 vg~VpTmG~LH~GH~sLI~~A~~~~a-~~vVvSffvnP~qF~~~ed~~~yprtle~d~~lL~~~ 97 (301)
T 3cov_A 35 VMLVPTMGALHEGHLALVRAAKRVPG-SVVVVSIFVNPMQFGAGGDLDAYPRTPDDDLAQLRAE 97 (301)
T ss_dssp EEEEEECSCCCHHHHHHHHHHHTSTT-EEEEEEECCCGGGCCSSSHHHHSCCCHHHHHHHHHHT
T ss_pred EEEEecCCcccHHHHHHHHHHHHhcC-CEEEEEEcCChhhcCCccccccCCCCHHHHHHHHHhC
Confidence 44446777799999999999999 77 677777655442 12110012247889999988753
No 44
>2gks_A Bifunctional SAT/APS kinase; transferase, sulfurylase; HET: ADP; 2.31A {Aquifex aeolicus}
Probab=94.87 E-value=0.096 Score=46.07 Aligned_cols=64 Identities=19% Similarity=0.101 Sum_probs=46.9
Q ss_pred cEEEEcccCCCCCHHHHHHHHHHHHHhcCcEEEEEcCCCccccCCCCCCCCCHHHHHHHHHHHHHhcCCC
Q 031699 22 GAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIKPE 91 (154)
Q Consensus 22 ~~v~~gGtFDplH~GH~~ll~~A~~~~~~~viVgvt~~~~~~~k~~~~~i~~~~~R~~~v~~~l~~~~p~ 91 (154)
+.|+.-=|++|+|.||..++.+|+...++.|+|-+.... .| ..-.|.+.|.+..+.+++..-|.
T Consensus 164 ~~v~afqtrnP~Hr~H~~l~~~a~~~~~~~llv~p~~g~---~k---~~di~~~~R~~~~~~~~~~~~p~ 227 (546)
T 2gks_A 164 DKIVAFQTRNPMHRVHEELTKRAMEKVGGGLLLHPVVGL---TK---PGDVDVYTRMRIYKVLYEKYYDK 227 (546)
T ss_dssp SCEEEECCSSCCCHHHHHHHHHHHHHHTSEEEECCBCSB---CC---TTSCCHHHHHHHHHHHHHHHSCT
T ss_pred CcEEEEecCCCCcHHHHHHHHHHHHhcCCcEEEEeCcCC---CC---CCCCCHHHHHHHHHHHHHhcCCC
Confidence 456667899999999999999999753366766543332 12 22379999999999998886343
No 45
>3uk2_A Pantothenate synthetase; AMP, structural genomics, seattle S genomics center for infectious disease, ssgcid, ligase; HET: AMP; 2.25A {Burkholderia thailandensis} SCOP: c.26.1.0
Probab=94.73 E-value=0.047 Score=44.69 Aligned_cols=59 Identities=17% Similarity=0.376 Sum_probs=42.4
Q ss_pred EEEcccCCCCCHHHHHHHHHHHHHhcCcEEEEEcCCCcc--ccCCCCCCCCCHHHHHHHHHH
Q 031699 24 VVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPML--TNKQFAELIQPVDERMRNVEA 83 (154)
Q Consensus 24 v~~gGtFDplH~GH~~ll~~A~~~~~~~viVgvt~~~~~--~~k~~~~~i~~~~~R~~~v~~ 83 (154)
+-|-.|..-+|.||..|+++|.+.+ +.++|.+--++.- ++.-......+.+++++++++
T Consensus 24 ig~VPTMG~LH~GH~sLi~~A~~~~-d~vVvSifvnP~qf~~~ed~~~yprt~e~d~~ll~~ 84 (283)
T 3uk2_A 24 TAFVPTMGNLHEGHLSLMRLARQHG-DPVVASIFVNRLQFGPNEDFDKYPRTLQEDIEKLQK 84 (283)
T ss_dssp CEEEEECSSCCHHHHHHHHHHHTTC-SSEEEEECCCGGGSCTTSCTTTSCCCHHHHHHHHHT
T ss_pred EEEECCCCcccHHHHHHHHHHHHhC-CEEEEEEcCCHHHcCCcccccccCCCHHHHHHHHHH
Confidence 4455799999999999999999988 6788777554432 211112334788999998775
No 46
>3inn_A Pantothenate synthetase; ssgcid, SBRI, UW, decode, NIH, niaid, pantoate beta alanine ligase, ATP-binding, cytoplasm, ligase; HET: ATP; 2.10A {Brucella melitensis}
Probab=94.57 E-value=0.15 Score=42.37 Aligned_cols=60 Identities=15% Similarity=0.185 Sum_probs=40.7
Q ss_pred CcEEE--EcccCCCCCHHHHHHHHHHHHHhcCcEEEEEcCCCc--cccCCCCCCCCCHHHHHHHHHHH
Q 031699 21 YGAVV--LGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPM--LTNKQFAELIQPVDERMRNVEAY 84 (154)
Q Consensus 21 ~~~v~--~gGtFDplH~GH~~ll~~A~~~~~~~viVgvt~~~~--~~~k~~~~~i~~~~~R~~~v~~~ 84 (154)
.++++ +-| -+|.||+.|+++|.+.+ +.++|.+--++. .++.-....--+++..+++++..
T Consensus 43 ~~IgfVPTMG---~LH~GHlsLi~~A~~~~-d~vVVSIFVNP~QF~~~EDl~~YPRtle~D~~ll~~~ 106 (314)
T 3inn_A 43 KKIGFVPTMG---YLHKGHLELVRRARVEN-DVTLVSIFVNPLQFGANEDLGRYPRDLERDAGLLHDA 106 (314)
T ss_dssp CCEEEEEECS---SCCHHHHHHHHHHHHHC-SEEEEEECCCGGGSCTTSSTTTCCCCHHHHHHHHHHT
T ss_pred CeEEEEcCCC---ccCHHHHHHHHHHHHhC-CEEEEEECCChhhcCCCccccccCCCHHHHHHHHHhC
Confidence 45777 556 49999999999999998 788888754432 22211111225788888887753
No 47
>1m8p_A Sulfate adenylyltransferase; rossmann fold, phosphosulfate binding, T-state; HET: PPS; 2.60A {Penicillium chrysogenum} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1i2d_A*
Probab=93.92 E-value=0.13 Score=45.50 Aligned_cols=61 Identities=20% Similarity=0.138 Sum_probs=44.9
Q ss_pred cEEEEcccCCCCCHHHHHHHHHHHHHhcCcEEEEEcCCCccccCCCCCCCCCHHHHHHHHHHHHHhc
Q 031699 22 GAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSI 88 (154)
Q Consensus 22 ~~v~~gGtFDplH~GH~~ll~~A~~~~~~~viVgvt~~~~~~~k~~~~~i~~~~~R~~~v~~~l~~~ 88 (154)
+.|+.-=|++|+|.||..++.+|+...++.|+|-+.... .| ..-.+.+.|.+..+.+++..
T Consensus 191 ~~v~afqtrnP~Hr~H~~l~~~a~~~~~~~llv~pl~g~---~k---~~di~~~~R~~~~~~~~~~~ 251 (573)
T 1m8p_A 191 SRVVAFQTRNPMHRAHRELTVRAARSRQANVLIHPVVGL---TK---PGDIDHFTRVRAYQALLPRY 251 (573)
T ss_dssp CSEEEECCSSCCCHHHHHHHHHHHHHTTCEEEECCBCCC---CC---TTCHHHHHHHHHHHHHGGGS
T ss_pred CeEEEEeeCCCcchhhHHHHHHHHHhcCCcEEEEeCCCC---CC---CCCCCHHHHHHHHHHHHHhC
Confidence 445556789999999999999999874466666443322 12 22378999999999998876
No 48
>3mxt_A Pantothenate synthetase; alpha-beta-alpha, structural genomics, center for structural of infectious diseases, csgid, ligase; HET: MSE; 1.85A {Campylobacter jejuni subsp} SCOP: c.26.1.0 PDB: 3uy4_A*
Probab=90.76 E-value=0.12 Score=42.36 Aligned_cols=37 Identities=27% Similarity=0.459 Sum_probs=26.9
Q ss_pred CcEEEEcccCCCCCHHHHHHHHHHHHHhcCcEEEEEcCCC
Q 031699 21 YGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGP 60 (154)
Q Consensus 21 ~~~v~~gGtFDplH~GH~~ll~~A~~~~~~~viVgvt~~~ 60 (154)
.+++++ -|---+|.||+.|+++|++ + |.++|.+--++
T Consensus 25 ~~Ig~V-PTMGaLH~GHlsLv~~Ar~-~-d~VVVSIFVNP 61 (285)
T 3mxt_A 25 LSIGYV-PTMGFLHDGHLSLVKHAKT-Q-DKVIVSIFVNP 61 (285)
T ss_dssp CCEEEE-EECSSCCHHHHHHHHHHTT-S-SEEEEEECCCG
T ss_pred CeEEEE-cCCCcccHHHHHHHHHHHh-C-CEEEEEeccCc
Confidence 345552 2333599999999999999 6 88888874443
No 49
>3n8h_A Pantothenate synthetase; alpha-beta sandwich, ligase, structural genomics, structural of infectious diseases; HET: MSE AMP GOL; 2.00A {Francisella tularensis subsp} PDB: 3qtt_A*
Probab=89.96 E-value=0.35 Score=39.12 Aligned_cols=38 Identities=24% Similarity=0.377 Sum_probs=29.1
Q ss_pred CcEEEEcccCCCCCHHHHHHHHHHHHHhcCcEEEEEcCCC
Q 031699 21 YGAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGP 60 (154)
Q Consensus 21 ~~~v~~gGtFDplH~GH~~ll~~A~~~~~~~viVgvt~~~ 60 (154)
.+++++ -|---+|.||+.|+++|++.+ |.++|.+--++
T Consensus 24 ~~ig~V-PTMGaLH~GHlsLv~~Ar~~~-d~vVVSIFVNP 61 (264)
T 3n8h_A 24 QKIGFV-PTMGALHNGHISLIKKAKSEN-DVVIVSIFVNP 61 (264)
T ss_dssp SCEEEE-EECSSCCHHHHHHHHHHHHHC-SEEEEEECCCG
T ss_pred CcEEEE-CCCcchhHHHHHHHHHHHHhC-CEEEEEEccCc
Confidence 345544 466689999999999999988 78888775444
No 50
>3cr8_A Sulfate adenylyltranferase, adenylylsulfate kinase; APS kinase, transferase, sulfate metabolism, nucleotide 2 kinase; 2.95A {Thiobacillus denitrificans}
Probab=89.48 E-value=1.3 Score=38.97 Aligned_cols=70 Identities=11% Similarity=0.039 Sum_probs=47.8
Q ss_pred cEEEEcccCCCCCHHHHHHHHHHHHHhcCcEEEEEcCCCccccCCCCCCCCCHHHHHHHHHHHHHhcCCCceE--EEEEc
Q 031699 22 GAVVLGGTFDRLHDGHRLFLKASAELARDRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIKPELVV--QTEPI 99 (154)
Q Consensus 22 ~~v~~gGtFDplH~GH~~ll~~A~~~~~~~viVgvt~~~~~~~k~~~~~i~~~~~R~~~v~~~l~~~~p~~~v--~i~ei 99 (154)
+++.| =|-||+|.||..++++|+....+.|+|-+. +...+ .--.+.+-|.+..+.+++.. |.-++ .++++
T Consensus 165 ~v~af-qtrnp~Hrah~~~~~~~~~~~~~~lll~pl----~g~~k--~~d~~~~~r~~~~~~~~~~~-p~~~~~l~~~p~ 236 (552)
T 3cr8_A 165 RIIAW-QARQPMHRAQYEFCLKSAIENEANLLLHPQ----VGGDI--TEAPAYFGLVRSFLAIRDRF-PAATTQLSLLPA 236 (552)
T ss_dssp SEEEE-CCSSCCCHHHHHHHHHHHHHTTCEEEECCB----CCCCT--TTCTTHHHHHHHHHHHGGGS-CGGGEEECBBCS
T ss_pred ceEEE-ecCCCCchHHHHHHHHHHHhcCCeEEEEec----cCCCC--CCCCCHHHHHHHHHHHHHhC-CCccEEEeecch
Confidence 34444 899999999999999999554465555332 22222 33489999999999999987 43333 34554
No 51
>1x6v_B Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthethase 1; transferase, ATP sulfurylase, APS kinase, PAPS; HET: ADP; 1.75A {Homo sapiens} SCOP: b.122.1.3 c.26.1.5 c.37.1.4 PDB: 1xjq_B* 1xnj_B* 2qjf_A* 2ofx_A* 2ofw_A*
Probab=81.76 E-value=7.5 Score=34.85 Aligned_cols=61 Identities=20% Similarity=0.222 Sum_probs=43.8
Q ss_pred CcEEEEcccCCCCCHHHHHHHHHHHHHhcC------cEEEEEcCCCccccCCCCCCCCCHHHHHHHHHHHHHh
Q 031699 21 YGAVVLGGTFDRLHDGHRLFLKASAELARD------RIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKS 87 (154)
Q Consensus 21 ~~~v~~gGtFDplH~GH~~ll~~A~~~~~~------~viVgvt~~~~~~~k~~~~~i~~~~~R~~~v~~~l~~ 87 (154)
-+.|+.-=|-||+|.||..|.+.|++...+ -|+|-+.-.. .| .--.|.+.|.+..+.+++.
T Consensus 412 w~~VvafqtrNP~HraHe~l~~~a~~~~~d~g~~~~~lll~pl~G~---tk---~~di~~~~r~~~~~~~~~~ 478 (630)
T 1x6v_B 412 ADAVSAFQLRNPVHNGHALLMQDTHKQLLERGYRRPVLLLHPLGGW---TK---DDDVPLMWRMKQHAAVLEE 478 (630)
T ss_dssp CSEEEEEEESSCCCHHHHHHHHHHHHHHHHHTCSSEEEEEEEBCSC---CC---TTSCCHHHHHHHHHHHHHT
T ss_pred CCeEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCcEEEEeCcCC---CC---CCCCCHHHHHHHHHHHHHc
Confidence 345555679999999999999999874223 3555543332 12 2347999999999999995
No 52
>3plv_C 66 kDa U4/U6.U5 small nuclear ribonucleoprotein C; ubiquitin-like, peptide binding protein; 1.90A {Saccharomyces cerevisiae}
Probab=73.02 E-value=2.6 Score=21.12 Aligned_cols=16 Identities=31% Similarity=0.356 Sum_probs=13.6
Q ss_pred HHHHHHHHHCCCCcee
Q 031699 126 LSVNKKRADRGLSQLK 141 (154)
Q Consensus 126 ~~iN~~R~~~gl~~l~ 141 (154)
+.-|.+|.+.||+|+.
T Consensus 5 EEtnk~r~~lGLkplp 20 (21)
T 3plv_C 5 EETNELRASLGLKLIP 20 (26)
T ss_dssp HHHHHHHHHTTCCCCC
T ss_pred HHHHHHHHHcCCCCCC
Confidence 4569999999999973
No 53
>4h0a_A Uncharacterized protein; CAP protein family, cysteine-rich secretory proteins, struct genomics, joint center for structural genomics; 1.90A {Staphylococcus aureus subsp}
Probab=57.64 E-value=5.6 Score=32.56 Aligned_cols=18 Identities=33% Similarity=0.364 Sum_probs=15.4
Q ss_pred HHHHHHHHHHCCCCceeE
Q 031699 125 GLSVNKKRADRGLSQLKV 142 (154)
Q Consensus 125 ~~~iN~~R~~~gl~~l~i 142 (154)
-..||+.|+++||+||..
T Consensus 210 l~liN~~R~~~GL~pL~~ 227 (323)
T 4h0a_A 210 YEVTNEMRKLKGLKPLKI 227 (323)
T ss_dssp HHHHHHHHHHTTCCCCEE
T ss_pred HHHHHHHHHHcCCcccCc
Confidence 345999999999999975
No 54
>4ifa_A Extracellular protein containing A SCP domain; vaccine candi virulence, pathogenesis, center for structural genomics of infectious diseases; HET: MSE; 1.50A {Bacillus anthracis}
Probab=47.55 E-value=10 Score=31.38 Aligned_cols=17 Identities=24% Similarity=0.077 Sum_probs=14.9
Q ss_pred HHHHHHHHHCCCCceeE
Q 031699 126 LSVNKKRADRGLSQLKV 142 (154)
Q Consensus 126 ~~iN~~R~~~gl~~l~i 142 (154)
..+|+.|++.||+||..
T Consensus 226 ~lvN~~Ra~~Gl~pL~~ 242 (339)
T 4ifa_A 226 DLTNIIRSRHNLPLLAW 242 (339)
T ss_dssp HHHHHHHHHTTCCCCEE
T ss_pred HHHHHHHHHcCCCCCcc
Confidence 34999999999999975
No 55
>2l9d_A Uncharacterized protein; PG9854E, structural genomics, PSI-biology, protein structure initiative, unknown function; NMR {Methylobacillus flagellatus}
Probab=40.30 E-value=16 Score=25.53 Aligned_cols=62 Identities=19% Similarity=0.253 Sum_probs=39.9
Q ss_pred CcEEEEEcCCCccccCCCCCCCCCHHHHHHHHHHHHHhcCCCceEEEEEccCCCCCcccccccceeeehhhhhcc
Q 031699 50 DRIVVGVCDGPMLTNKQFAELIQPVDERMRNVEAYIKSIKPELVVQTEPITDPYGPSIVDENLEAIVVSKETLPG 124 (154)
Q Consensus 50 ~~viVgvt~~~~~~~k~~~~~i~~~~~R~~~v~~~l~~~~p~~~v~i~ei~d~~gps~t~~~l~~lVvs~Et~~~ 124 (154)
+.+|-|+|.+. |+. +| ..+.||+..+ +..+.|+-++.+.+. .-|. ....++|+||+++-..-
T Consensus 12 e~iI~GiT~~G----k~F-RP-SDWAERL~Gv---ma~F~~~~rl~YSp~---~~P~-~i~GvkcVvVd~~L~~~ 73 (108)
T 2l9d_A 12 EIIIQGLTRAG----KPF-RP-SDWVDRMCST---YASFGADRKLRYSPY---LKPR-VIEGVRCLAVDLKLKDT 73 (108)
T ss_dssp EEEEEEEETTS----CBC-SC-TTHHHHHHHT---TCEECSSSSEECCTT---EEEC-CBTTBCCEEEETHHHHH
T ss_pred eEEEEeecCCC----CCc-CC-chHHHHHhhH---HHhcCCCCcceeCCc---ccce-eeCCeeEEEECcHhhhc
Confidence 57889998765 221 12 6899999866 455555544443332 3443 47889999999886543
No 56
>1jil_A Tyrrs, tyrosyl-tRNA synthetase; truncation, based inhibitor design, ligase; HET: 485; 2.20A {Staphylococcus aureus} SCOP: c.26.1.1 PDB: 1jij_A* 1jii_A* 1jik_A*
Probab=36.11 E-value=1.9e+02 Score=24.20 Aligned_cols=55 Identities=27% Similarity=0.363 Sum_probs=30.3
Q ss_pred cCCCCCHHHHHHHHHHHHHh--cCcEEEEEcCCC-cccc---CCCCCCCCCHHHHHHHHHH
Q 031699 29 TFDRLHDGHRLFLKASAELA--RDRIVVGVCDGP-MLTN---KQFAELIQPVDERMRNVEA 83 (154)
Q Consensus 29 tFDplH~GH~~ll~~A~~~~--~~~viVgvt~~~-~~~~---k~~~~~i~~~~~R~~~v~~ 83 (154)
|=+-+|.||+.-+.....+- ..++++-+.+.. ++.+ |...++..+.++-.+.++.
T Consensus 42 Tg~sLHlGh~v~l~~~~~lQ~~G~~~~~lIgd~ta~igdp~gk~~~R~~l~~e~i~~n~~~ 102 (420)
T 1jil_A 42 TADSLHIGHLLPFLTLRRFQEHGHRPIVLIGGGTGMIGDPSGKSEERVLQTEEQVDKNIEG 102 (420)
T ss_dssp SSSSCBHHHHHHHHHHHHHHHTTCEEEEEECTTGGGTCCCTTCSSCCCCCCHHHHHHHHHH
T ss_pred CCCCccHHHHHHHHHHHHHHHCCCcEEEEEcCceeEecCCCccccccccCCHHHHHHHHHH
Confidence 33339999988777776653 246777775543 2211 1112344566655555543
No 57
>1yi8_B Tryptophanyl-tRNA synthetase; ligase; HET: TRP; 2.10A {Deinococcus radiodurans} PDB: 1yia_B* 1yid_B* 2a4m_A*
Probab=35.59 E-value=24 Score=29.07 Aligned_cols=27 Identities=30% Similarity=0.345 Sum_probs=17.0
Q ss_pred CCHHHHH-HHHHHHHHh-cCcEEEEEcCC
Q 031699 33 LHDGHRL-FLKASAELA-RDRIVVGVCDG 59 (154)
Q Consensus 33 lH~GH~~-ll~~A~~~~-~~~viVgvt~~ 59 (154)
+|.||.. .+.....+- .-.+++.+.+.
T Consensus 35 lHLGn~~g~l~~~~~lQ~~~~~~~~IaD~ 63 (351)
T 1yi8_B 35 LHLGHLAGSLQNRVRLQDEAELFVLLADV 63 (351)
T ss_dssp CBHHHHHHTHHHHHHHTSSSEEEEEECHH
T ss_pred ccHHHHHHHHHHHHHHHHhCCeEEEEecc
Confidence 9999988 555553332 13567777664
No 58
>2cya_A Tyrosyl-tRNA synthetase; tyrrs, aminoacylation, structural genomics, NPPSFA, national on protein structural and functional analyses; 2.20A {Aeropyrum pernix}
Probab=33.90 E-value=39 Score=27.91 Aligned_cols=27 Identities=15% Similarity=0.065 Sum_probs=19.1
Q ss_pred CCHHHHHHHHHHHHHh--cCcEEEEEcCC
Q 031699 33 LHDGHRLFLKASAELA--RDRIVVGVCDG 59 (154)
Q Consensus 33 lH~GH~~ll~~A~~~~--~~~viVgvt~~ 59 (154)
+|.||+--+.....+- .-.+++-+++.
T Consensus 48 lHlG~l~~l~~~~~lQ~~G~~~~~~iaD~ 76 (364)
T 2cya_A 48 AHIGWLVWMYKVKDLVEAGVDFSVLEATW 76 (364)
T ss_dssp CBTHHHHHHHHHHHHHHTTCEEEEEECHH
T ss_pred ccHhHHHHHHHHHHHHHCCCCEEEEEeCc
Confidence 9999977777666552 24677778764
No 59
>2zp1_A Tyrosyl-tRNA synthetase; tRNA synthetases class I, ligase, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, nucleotide-binding; HET: IYR; 1.70A {Methanocaldococcus jannaschii} PDB: 1zh6_A* 1j1u_A* 1u7d_A 2q1g_A* 2pxh_A* 1zh0_A* 2q1i_A* 2ag6_A* 3qe4_A* 3d6u_A* 3d6v_A* 1u7x_A 3n2y_A* 2hgz_A*
Probab=29.95 E-value=47 Score=26.74 Aligned_cols=29 Identities=28% Similarity=0.375 Sum_probs=19.7
Q ss_pred CCCHHHHHHHHHHHHHh--cCcEEEEEcCCC
Q 031699 32 RLHDGHRLFLKASAELA--RDRIVVGVCDGP 60 (154)
Q Consensus 32 plH~GH~~ll~~A~~~~--~~~viVgvt~~~ 60 (154)
.+|.||+--+.....+- .-.+++-+++..
T Consensus 40 ~lHlGhl~~l~~~~~lQ~~g~~~~~~i~D~~ 70 (314)
T 2zp1_A 40 KIHLGHYLQIKKMIDLQNAGFDIIILLADLA 70 (314)
T ss_dssp SCBHHHHHHHHHHHHHHHTTEEEEEEECHHH
T ss_pred CcchhhHHHHHHHHHHHHCCCCEEEEEecce
Confidence 49999977776666652 136777776643
No 60
>2dlc_X Tyrosyl-tRNA synthetase, cytoplasmic; tyrrs, ligase-tRNA complex; HET: 2MG OMG M2G PSU 6IA 5MC 5MU 1MA YMP; 2.40A {Saccharomyces cerevisiae}
Probab=27.03 E-value=53 Score=27.35 Aligned_cols=30 Identities=20% Similarity=0.081 Sum_probs=19.6
Q ss_pred CCC---CCHHHHHHHHHHHHH--hcCcEEEEEcCC
Q 031699 30 FDR---LHDGHRLFLKASAEL--ARDRIVVGVCDG 59 (154)
Q Consensus 30 FDp---lH~GH~~ll~~A~~~--~~~~viVgvt~~ 59 (154)
||| +|.||+.-+...... ..-.+++-+.+.
T Consensus 46 ~~PTG~LHlG~~~~al~~~~~~q~g~~~ii~I~D~ 80 (394)
T 2dlc_X 46 TAPTGRPHCGYFVPMTKLADFLKAGCEVTVLLADL 80 (394)
T ss_dssp ECCCSCCBGGGHHHHHHHHHHHHTTCEEEEEECHH
T ss_pred eCCCCCccHHHHHHHHHHHHHHHcCCcEEEEEcCC
Confidence 666 999998755543333 224688888773
No 61
>4dlp_A Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA synthetase, class IA:methionyl-tRNA...; structural genomics; 2.65A {Brucella melitensis biovar abortus 230ORGANISM_TAXID}
Probab=26.71 E-value=34 Score=29.33 Aligned_cols=18 Identities=17% Similarity=0.161 Sum_probs=14.2
Q ss_pred cEEEEcccC---CCCCHHHHH
Q 031699 22 GAVVLGGTF---DRLHDGHRL 39 (154)
Q Consensus 22 ~~v~~gGtF---DplH~GH~~ 39 (154)
+..+++.+. +++|.||..
T Consensus 26 ~~~i~~p~pypng~lHiGH~r 46 (536)
T 4dlp_A 26 KYYITTAIAYPNGKPHIGHAY 46 (536)
T ss_dssp EEEEEECCBCCSSCCCHHHHH
T ss_pred CEEEeCCCCCCCCCcCcchhH
Confidence 467777766 799999986
No 62
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=22.40 E-value=1.2e+02 Score=20.87 Aligned_cols=38 Identities=13% Similarity=-0.073 Sum_probs=25.0
Q ss_pred ccccCCCCCCCCCcEEEEcccCCCCCHHHHHHHHHHHHH
Q 031699 9 SVVNSNISPDNSYGAVVLGGTFDRLHDGHRLFLKASAEL 47 (154)
Q Consensus 9 ~~~~~~~~~~~~~~~v~~gGtFDplH~GH~~ll~~A~~~ 47 (154)
|.++....-...-.++++.|++++ +.|...+++.+..+
T Consensus 11 ~~~~~~~~~~~~~~~i~~~G~~~~-~Kg~~~li~a~~~l 48 (177)
T 2f9f_A 11 PVETSKFKFKCYGDFWLSVNRIYP-EKRIELQLEVFKKL 48 (177)
T ss_dssp -CCCTTCCCCCCCSCEEEECCSSG-GGTHHHHHHHHHHC
T ss_pred CccccccccCCCCCEEEEEecccc-ccCHHHHHHHHHhC
Confidence 344443333344556888899986 68998888877766
Done!