Query 031705
Match_columns 154
No_of_seqs 278 out of 1395
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 06:12:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031705.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031705hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iwl_A Copper transport protei 99.7 6.5E-16 2.2E-20 96.8 8.7 67 26-94 1-67 (68)
2 3dxs_X Copper-transporting ATP 99.6 1.8E-14 6.1E-19 91.0 9.3 68 26-94 1-72 (74)
3 4a4j_A Pacszia, cation-transpo 99.6 3.4E-14 1.2E-18 88.4 9.9 65 27-92 2-69 (69)
4 1cc8_A Protein (metallochapero 99.5 6.4E-14 2.2E-18 88.3 10.0 68 26-94 4-72 (73)
5 3fry_A Probable copper-exporti 99.5 3.9E-14 1.3E-18 89.7 8.8 68 24-94 2-70 (73)
6 2crl_A Copper chaperone for su 99.4 7.4E-13 2.5E-17 88.9 10.0 72 24-96 16-87 (98)
7 2k2p_A Uncharacterized protein 99.4 5.9E-13 2E-17 87.1 6.8 67 22-89 17-84 (85)
8 2xmm_A SSR2857 protein, ATX1; 99.4 8.1E-13 2.8E-17 79.8 6.8 60 29-89 3-63 (64)
9 2l3m_A Copper-ION-binding prot 99.4 3.1E-12 1.1E-16 79.0 9.5 65 25-90 3-71 (71)
10 2roe_A Heavy metal binding pro 99.4 8E-13 2.7E-17 81.1 6.7 62 30-92 3-65 (66)
11 2xmw_A PACS-N, cation-transpor 99.4 6.4E-12 2.2E-16 77.3 9.7 64 27-91 3-69 (71)
12 1osd_A MERP, hypothetical prot 99.4 5.5E-12 1.9E-16 77.9 9.2 66 26-92 2-71 (72)
13 1mwy_A ZNTA; open-faced beta-s 99.4 9.7E-12 3.3E-16 77.6 10.0 66 26-92 2-69 (73)
14 1aw0_A Menkes copper-transport 99.3 7.4E-12 2.5E-16 77.3 9.1 65 27-92 3-71 (72)
15 2g9o_A Copper-transporting ATP 99.3 6.5E-12 2.2E-16 82.5 8.6 67 27-94 3-76 (90)
16 3cjk_B Copper-transporting ATP 99.3 1.4E-11 4.9E-16 76.9 9.9 65 28-93 3-71 (75)
17 2qif_A Copper chaperone COPZ; 99.3 1.3E-11 4.4E-16 74.8 9.3 63 26-89 1-67 (69)
18 1opz_A Potential copper-transp 99.3 1.2E-11 4.2E-16 76.8 9.2 67 25-92 4-74 (76)
19 1y3j_A Copper-transporting ATP 99.3 4.2E-12 1.4E-16 80.0 7.0 67 26-93 2-72 (77)
20 1kvi_A Copper-transporting ATP 99.3 9.2E-12 3.1E-16 78.7 8.6 69 24-93 5-77 (79)
21 1q8l_A Copper-transporting ATP 99.3 9.4E-12 3.2E-16 80.2 8.6 68 26-94 8-79 (84)
22 1fvq_A Copper-transporting ATP 99.3 1.2E-11 4.2E-16 76.3 8.7 65 28-93 3-70 (72)
23 1cpz_A Protein (COPZ); copper 99.3 1.6E-11 5.5E-16 74.8 8.3 61 30-91 3-67 (68)
24 1jww_A Potential copper-transp 99.3 1.9E-11 6.4E-16 77.1 8.4 68 26-94 2-73 (80)
25 2kt2_A Mercuric reductase; nme 99.3 1.9E-11 6.6E-16 75.0 8.1 62 30-92 3-67 (69)
26 1yg0_A COP associated protein; 99.3 2.6E-11 8.8E-16 73.5 7.9 61 28-89 2-65 (66)
27 2ldi_A Zinc-transporting ATPas 99.3 1.7E-11 5.8E-16 75.0 7.1 64 26-90 2-69 (71)
28 2kyz_A Heavy metal binding pro 99.3 1.3E-11 4.6E-16 75.9 6.4 61 29-92 3-64 (67)
29 2kkh_A Putative heavy metal tr 99.3 6.4E-11 2.2E-15 78.1 10.1 72 22-94 11-86 (95)
30 2ofg_X Zinc-transporting ATPas 99.2 5.5E-11 1.9E-15 81.1 9.1 67 25-92 6-76 (111)
31 1yjr_A Copper-transporting ATP 99.2 3.7E-11 1.3E-15 74.7 7.4 64 28-92 5-72 (75)
32 2ew9_A Copper-transporting ATP 99.2 6.6E-11 2.3E-15 83.2 8.9 65 27-92 80-148 (149)
33 1p6t_A Potential copper-transp 99.2 9.2E-11 3.2E-15 82.9 8.5 68 26-94 73-144 (151)
34 1qup_A Superoxide dismutase 1 99.2 1.7E-10 5.9E-15 88.3 9.9 70 27-97 6-75 (222)
35 2aj0_A Probable cadmium-transp 99.1 1.9E-10 6.5E-15 71.3 6.4 58 28-90 4-62 (71)
36 2rop_A Copper-transporting ATP 99.1 5.4E-10 1.8E-14 83.3 9.7 67 27-94 122-192 (202)
37 1jk9_B CCS, copper chaperone f 99.1 6.2E-10 2.1E-14 86.6 9.1 70 27-97 7-76 (249)
38 2ew9_A Copper-transporting ATP 99.0 1E-09 3.5E-14 77.1 8.9 67 26-93 3-73 (149)
39 2rop_A Copper-transporting ATP 98.8 1.6E-08 5.5E-13 75.2 7.2 65 25-90 18-89 (202)
40 1p6t_A Potential copper-transp 98.8 4.2E-08 1.4E-12 69.0 8.7 63 26-89 5-71 (151)
41 3j09_A COPA, copper-exporting 98.7 4.5E-08 1.5E-12 86.1 8.4 64 28-92 3-70 (723)
42 3bpd_A Uncharacterized protein 92.2 0.61 2.1E-05 30.7 6.5 67 25-93 5-80 (100)
43 2raq_A Conserved protein MTH88 90.6 1.6 5.4E-05 28.6 7.3 67 25-93 5-80 (97)
44 2x3d_A SSO6206; unknown functi 87.1 2.1 7.2E-05 27.9 6.0 66 26-93 4-79 (96)
45 3cq1_A Putative uncharacterize 86.6 1 3.4E-05 29.5 4.4 35 28-62 42-82 (103)
46 3lvj_C Sulfurtransferase TUSA; 84.2 4.2 0.00014 25.3 6.3 54 29-92 11-67 (82)
47 1uwd_A Hypothetical protein TM 83.8 1.6 5.3E-05 28.5 4.3 35 28-62 43-83 (103)
48 2jsx_A Protein NAPD; TAT, proo 82.5 6 0.00021 25.6 6.7 44 39-82 17-61 (95)
49 1jdq_A TM006 protein, hypothet 82.0 4.8 0.00017 26.1 6.2 55 29-93 27-84 (98)
50 3hz7_A Uncharacterized protein 78.8 3.9 0.00013 25.9 4.8 53 30-93 3-60 (87)
51 3lno_A Putative uncharacterize 77.1 2 6.9E-05 28.3 3.1 36 28-63 45-87 (108)
52 1je3_A EC005, hypothetical 8.6 74.0 4.1 0.00014 26.5 3.9 55 28-92 27-84 (97)
53 4gwb_A Peptide methionine sulf 59.8 29 0.00099 24.8 6.3 45 38-82 9-71 (168)
54 1fvg_A Peptide methionine sulf 59.2 27 0.00091 25.7 6.1 53 25-82 42-116 (199)
55 1pav_A Hypothetical protein TA 57.6 7.4 0.00025 23.7 2.5 52 30-91 8-62 (78)
56 3bqh_A PILB, peptide methionin 55.1 31 0.0011 25.2 5.9 45 38-82 9-75 (193)
57 2j89_A Methionine sulfoxide re 50.8 41 0.0014 25.8 6.1 53 25-82 93-167 (261)
58 3e0m_A Peptide methionine sulf 50.3 35 0.0012 26.8 5.9 45 38-82 9-73 (313)
59 1ff3_A Peptide methionine sulf 50.1 46 0.0016 24.7 6.2 53 25-82 41-115 (211)
60 2w7v_A General secretion pathw 42.0 61 0.0021 20.8 5.2 50 43-94 16-71 (95)
61 2ko1_A CTR148A, GTP pyrophosph 38.9 60 0.002 19.2 4.9 21 38-58 56-76 (88)
62 1kaf_A Transcription regulator 37.4 56 0.0019 21.6 4.4 41 50-92 42-82 (108)
63 2k1h_A Uncharacterized protein 35.5 75 0.0026 20.3 4.8 38 43-82 40-79 (94)
64 1nwa_A Peptide methionine sulf 32.8 43 0.0015 24.7 3.6 52 26-82 25-94 (203)
65 2f1f_A Acetolactate synthase i 31.9 79 0.0027 22.2 4.9 58 2-60 15-77 (164)
66 1owx_A Lupus LA protein, SS-B, 31.3 1.2E+02 0.004 20.2 7.1 56 29-85 19-76 (121)
67 2cpq_A FragIle X mental retard 29.3 1.1E+02 0.0038 19.3 7.4 41 44-86 36-76 (91)
68 2nyt_A Probable C->U-editing e 27.6 63 0.0022 23.3 3.8 60 28-93 84-146 (190)
69 1t1v_A SH3BGRL3, SH3 domain-bi 27.5 68 0.0023 19.5 3.5 34 28-62 3-41 (93)
70 1wg1_A KIAA1579 protein, homol 24.4 1.2E+02 0.004 18.0 4.7 51 30-82 7-58 (88)
71 1xhj_A Nitrogen fixation prote 24.0 93 0.0032 19.6 3.6 32 28-59 39-78 (88)
72 2j58_A WZA, outer membrane lip 23.8 1.3E+02 0.0044 23.8 5.2 55 30-86 113-182 (359)
73 2yy3_A Elongation factor 1-bet 23.1 1.3E+02 0.0046 19.0 4.3 35 26-60 50-86 (91)
74 3rdw_A Putative arsenate reduc 22.8 1.5E+02 0.0051 19.3 4.7 53 26-87 4-56 (121)
75 1gh8_A Translation elongation 22.0 1.4E+02 0.0046 18.9 4.1 35 26-60 48-83 (89)
76 2fi0_A Conserved domain protei 21.3 66 0.0023 19.6 2.5 18 72-90 61-78 (81)
77 4g1a_A AQ-C16C19 peptide; heli 21.0 28 0.00097 17.3 0.5 10 36-45 15-24 (32)
78 2pc6_A Probable acetolactate s 20.5 1.9E+02 0.0063 20.3 5.0 57 2-59 16-77 (165)
No 1
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=99.65 E-value=6.5e-16 Score=96.76 Aligned_cols=67 Identities=22% Similarity=0.448 Sum_probs=62.5
Q ss_pred ceEEEEEEcCCCHhHHHHHHHHHhCCCCceEEEEeCCCcEEEEEecCCHHHHHHHHHHhhCCceEeccc
Q 031705 26 LQTVEVKVRIDCEGCERKVKRAVEGMKGVKQVDVERKANKVTVVGYVEPSKVVSRIAHRTGKKAEIWPY 94 (154)
Q Consensus 26 ~~~~~l~Vgm~C~~C~~kI~kal~~~~GV~~v~vd~~~~~v~V~g~~~~~~v~~~i~~~~G~~a~~~~~ 94 (154)
|++.+|+|||+|.+|+.+|+++|++++|| ++++|+.+++++|.+.+++++|.++|+ ++||.+++|+.
T Consensus 1 m~~~~~~vgm~C~~C~~~i~~~l~~~~gV-~v~v~~~~~~~~v~~~~~~~~i~~~i~-~~Gy~~~~~~~ 67 (68)
T 3iwl_A 1 MPKHEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLK-KTGKTVSYLGL 67 (68)
T ss_dssp -CEEEEEECCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESSCHHHHHHHHH-TTCSCEEEEEC
T ss_pred CceEEEEECcCcHHHHHHHHHHHHcCCCe-EEEEEcCCCEEEEEecCCHHHHHHHHH-HcCCceEecCC
Confidence 45678888999999999999999999999 999999999999999899999999999 99999999874
No 2
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0
Probab=99.57 E-value=1.8e-14 Score=90.96 Aligned_cols=68 Identities=26% Similarity=0.432 Sum_probs=62.6
Q ss_pred ceEEEEEE-cCCCHhHHHHHHHHHhCCCCceEEEEeCCCcEEEEEe---cCCHHHHHHHHHHhhCCceEeccc
Q 031705 26 LQTVEVKV-RIDCEGCERKVKRAVEGMKGVKQVDVERKANKVTVVG---YVEPSKVVSRIAHRTGKKAEIWPY 94 (154)
Q Consensus 26 ~~~~~l~V-gm~C~~C~~kI~kal~~~~GV~~v~vd~~~~~v~V~g---~~~~~~v~~~i~~~~G~~a~~~~~ 94 (154)
|++++|.| ||+|.+|+.+|+++|++++||.++.+|+.+++++|.. .+++++|.++|+ ++||.+++++.
T Consensus 1 M~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~~ 72 (74)
T 3dxs_X 1 MRKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEIE-DAGFEAEILAE 72 (74)
T ss_dssp CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHH-HHTCEEEEEEE
T ss_pred CcEEEEEECCcCCHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HCCCceEEccC
Confidence 56789999 9999999999999999999999999999999999974 368999999999 99999988764
No 3
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=99.56 E-value=3.4e-14 Score=88.35 Aligned_cols=65 Identities=25% Similarity=0.539 Sum_probs=60.4
Q ss_pred eEEEEEE-cCCCHhHHHHHHHHHhCCCCceEEEEeCCCcEEEEE--ecCCHHHHHHHHHHhhCCceEec
Q 031705 27 QTVEVKV-RIDCEGCERKVKRAVEGMKGVKQVDVERKANKVTVV--GYVEPSKVVSRIAHRTGKKAEIW 92 (154)
Q Consensus 27 ~~~~l~V-gm~C~~C~~kI~kal~~~~GV~~v~vd~~~~~v~V~--g~~~~~~v~~~i~~~~G~~a~~~ 92 (154)
++++|.| ||+|.+|+.+|+++|.+++||.++.+|+.+++++|. +.+++++|.++|+ ++||.++++
T Consensus 2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~-~~Gy~~~~~ 69 (69)
T 4a4j_A 2 QTINLQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVE-RAGYHARVL 69 (69)
T ss_dssp EEEEEEEESCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTCCHHHHHHHHH-HTTCEEEEC
T ss_pred CEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHH-HcCCceEeC
Confidence 4678999 999999999999999999999999999999999998 5689999999999 999998763
No 4
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A
Probab=99.54 E-value=6.4e-14 Score=88.35 Aligned_cols=68 Identities=19% Similarity=0.399 Sum_probs=63.2
Q ss_pred ceEEEEEEcCCCHhHHHHHHHHHhCCC-CceEEEEeCCCcEEEEEecCCHHHHHHHHHHhhCCceEeccc
Q 031705 26 LQTVEVKVRIDCEGCERKVKRAVEGMK-GVKQVDVERKANKVTVVGYVEPSKVVSRIAHRTGKKAEIWPY 94 (154)
Q Consensus 26 ~~~~~l~Vgm~C~~C~~kI~kal~~~~-GV~~v~vd~~~~~v~V~g~~~~~~v~~~i~~~~G~~a~~~~~ 94 (154)
|.+++|+|.|+|.+|+.+|+++|++++ ||.++++|+.+++++|.+.+++++|.++|+ ++||.+.+|.+
T Consensus 4 m~~~~~~v~m~C~~C~~~ie~~l~~~~~GV~~~~v~~~~~~~~v~~~~~~~~i~~~i~-~~Gy~~~~~~~ 72 (73)
T 1cc8_A 4 IKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIK-KTGKEVRSGKQ 72 (73)
T ss_dssp CEEEEEEECCCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEESSCHHHHHHHHH-TTSSCEEEEEE
T ss_pred ceEEEEEEeeECHHHHHHHHHHHHhCCCCceEEEEECCCCEEEEEEeCCHHHHHHHHH-HhCCCceeeec
Confidence 567788999999999999999999999 999999999999999998889999999999 99999988753
No 5
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}
Probab=99.54 E-value=3.9e-14 Score=89.65 Aligned_cols=68 Identities=19% Similarity=0.358 Sum_probs=63.4
Q ss_pred CCceEEEEEE-cCCCHhHHHHHHHHHhCCCCceEEEEeCCCcEEEEEecCCHHHHHHHHHHhhCCceEeccc
Q 031705 24 RQLQTVEVKV-RIDCEGCERKVKRAVEGMKGVKQVDVERKANKVTVVGYVEPSKVVSRIAHRTGKKAEIWPY 94 (154)
Q Consensus 24 ~~~~~~~l~V-gm~C~~C~~kI~kal~~~~GV~~v~vd~~~~~v~V~g~~~~~~v~~~i~~~~G~~a~~~~~ 94 (154)
..|++.+|.| ||+|.+|+.+|+++|++ +||..+.+|+.+++++|... ++++|.++|+ ++||.+++++.
T Consensus 2 ~~m~~~~~~v~gm~C~~C~~~ie~~l~~-~gv~~~~v~~~~~~~~v~~~-~~~~i~~~i~-~~Gy~~~~~~~ 70 (73)
T 3fry_A 2 DSVEKIVLELSGLSCHHCVARVKKALEE-AGAKVEKVDLNEAVVAGNKE-DVDKYIKAVE-AAGYQAKLRSS 70 (73)
T ss_dssp CCCEEEEEEEESSBCGGGHHHHHHHHHH-TTCEEEEECSSEEEEEEEGG-GHHHHHHHHH-HTTCEEEECCS
T ss_pred CccEEEEEEECCCCCHHHHHHHHHHhcc-CCcEEEEEEccCCEEEEEEC-CHHHHHHHHH-HcCCceEecCc
Confidence 3577889999 99999999999999999 99999999999999999988 9999999999 99999988764
No 6
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.45 E-value=7.4e-13 Score=88.88 Aligned_cols=72 Identities=25% Similarity=0.437 Sum_probs=65.7
Q ss_pred CCceEEEEEEcCCCHhHHHHHHHHHhCCCCceEEEEeCCCcEEEEEecCCHHHHHHHHHHhhCCceEecccCC
Q 031705 24 RQLQTVEVKVRIDCEGCERKVKRAVEGMKGVKQVDVERKANKVTVVGYVEPSKVVSRIAHRTGKKAEIWPYVP 96 (154)
Q Consensus 24 ~~~~~~~l~Vgm~C~~C~~kI~kal~~~~GV~~v~vd~~~~~v~V~g~~~~~~v~~~i~~~~G~~a~~~~~~p 96 (154)
..+.+++|+|.|+|.+|+.+|+++|.+++||.++.+|+.+++++|...+++++|.++|+ ++||.+.++...+
T Consensus 16 ~~~~~~~l~V~m~C~~C~~~Ie~aL~~l~GV~~v~vdl~~~~~~V~~~~~~~~i~~~i~-~~Gy~~~~~~~~~ 87 (98)
T 2crl_A 16 GTLCTLEFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALLE-GTGRQAVLKGMGS 87 (98)
T ss_dssp CCCEEEEEEECCCSHHHHHHHHHTTTTCTTCCEEEEETTTTEEEEEESSCHHHHHHHHH-TTTSCEEEEESCC
T ss_pred ccceEEEEEEeeECHHHHHHHHHHHHcCCCceEEEEECCCCEEEEEEeCCHHHHHHHHH-HhCCceEEccCCC
Confidence 34567789999999999999999999999999999999999999998889999999999 9999999987643
No 7
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}
Probab=99.40 E-value=5.9e-13 Score=87.08 Aligned_cols=67 Identities=19% Similarity=0.259 Sum_probs=58.9
Q ss_pred hcCCceEEEEEE-cCCCHhHHHHHHHHHhCCCCceEEEEeCCCcEEEEEecCCHHHHHHHHHHhhCCce
Q 031705 22 KRRQLQTVEVKV-RIDCEGCERKVKRAVEGMKGVKQVDVERKANKVTVVGYVEPSKVVSRIAHRTGKKA 89 (154)
Q Consensus 22 ~~~~~~~~~l~V-gm~C~~C~~kI~kal~~~~GV~~v~vd~~~~~v~V~g~~~~~~v~~~i~~~~G~~a 89 (154)
....+.+++|.| ||+|.+|+.+|+++|.+++||.++.+|+..++++|...+++++|.++|+ ++||.+
T Consensus 17 ~~~~~~~~~l~V~Gm~C~~C~~~Ie~aL~~~~GV~~v~v~l~~~~~~V~~~~~~~~i~~~i~-~~Gy~~ 84 (85)
T 2k2p_A 17 LYFQGAGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGVSDAAHIAEIIT-AAGYTP 84 (85)
T ss_dssp -----CEEEEECTTCCHHHHHHHHHHHHHHHSTTCEEEEETTTTEEEEESCCCHHHHHHHHH-HTTCCC
T ss_pred ccccccEEEEEECCCCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEecCCHHHHHHHHH-HcCCCC
Confidence 445677789999 9999999999999999999999999999999999998789999999999 999975
No 8
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A
Probab=99.40 E-value=8.1e-13 Score=79.81 Aligned_cols=60 Identities=27% Similarity=0.490 Sum_probs=56.5
Q ss_pred EEEEE-cCCCHhHHHHHHHHHhCCCCceEEEEeCCCcEEEEEecCCHHHHHHHHHHhhCCce
Q 031705 29 VEVKV-RIDCEGCERKVKRAVEGMKGVKQVDVERKANKVTVVGYVEPSKVVSRIAHRTGKKA 89 (154)
Q Consensus 29 ~~l~V-gm~C~~C~~kI~kal~~~~GV~~v~vd~~~~~v~V~g~~~~~~v~~~i~~~~G~~a 89 (154)
..|.| ||+|.+|+.+|+++|.+++||.++.+|+..++++|.+..+.+.|.++|+ ++||.+
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~-~~G~~~ 63 (64)
T 2xmm_A 3 IQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIA-SAGYEV 63 (64)
T ss_dssp EEEECTTCCSHHHHHHHHHHHHHHCTTCEEEECTTTCEEEEECSSCHHHHHHHHH-HTTCCC
T ss_pred EEEEECCcCcHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEecCCHHHHHHHHH-HcCCCC
Confidence 46999 9999999999999999999999999999999999997788999999999 999975
No 9
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}
Probab=99.39 E-value=3.1e-12 Score=78.98 Aligned_cols=65 Identities=23% Similarity=0.441 Sum_probs=58.6
Q ss_pred CceEEEEEE-cCCCHhHHHHHHHHHhCCCCceEEEEeCCCcEEEEEe---cCCHHHHHHHHHHhhCCceE
Q 031705 25 QLQTVEVKV-RIDCEGCERKVKRAVEGMKGVKQVDVERKANKVTVVG---YVEPSKVVSRIAHRTGKKAE 90 (154)
Q Consensus 25 ~~~~~~l~V-gm~C~~C~~kI~kal~~~~GV~~v~vd~~~~~v~V~g---~~~~~~v~~~i~~~~G~~a~ 90 (154)
.|.++.|.| ||+|.+|+.+|+++|.+++||..+.+|+..++++|.. .++.+.|.+.|+ ++||.++
T Consensus 3 ~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~ 71 (71)
T 2l3m_A 3 AMEQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIE-DQGYDVQ 71 (71)
T ss_dssp SEEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTSCHHHHHHHHH-HTTCEEC
T ss_pred CcEEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCCCC
Confidence 467788999 9999999999999999999999999999999999973 368899999999 9999753
No 10
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A
Probab=99.39 E-value=8e-13 Score=81.15 Aligned_cols=62 Identities=29% Similarity=0.555 Sum_probs=57.2
Q ss_pred EEEE-cCCCHhHHHHHHHHHhCCCCceEEEEeCCCcEEEEEecCCHHHHHHHHHHhhCCceEec
Q 031705 30 EVKV-RIDCEGCERKVKRAVEGMKGVKQVDVERKANKVTVVGYVEPSKVVSRIAHRTGKKAEIW 92 (154)
Q Consensus 30 ~l~V-gm~C~~C~~kI~kal~~~~GV~~v~vd~~~~~v~V~g~~~~~~v~~~i~~~~G~~a~~~ 92 (154)
+|.| ||+|.+|+.+|+++|.+++||.++.+|+..++++|.+.++.++|.++|+ ++||.+..+
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~-~~Gy~~~~~ 65 (66)
T 2roe_A 3 KLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEGTADPKALVQAVE-EEGYKAEVL 65 (66)
T ss_dssp CEEEECCCSHHHHHHHHHHHHTSTTCCCEEECSSSCBEEECSCCCHHHHHHHHH-TTTCEEEEC
T ss_pred EEEECCeEcHHHHHHHHHHHHcCCCeEEEEEEeCCCEEEECCCCCHHHHHHHHH-HcCCCcEec
Confidence 5889 9999999999999999999999999999999999976678999999999 999987654
No 11
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A
Probab=99.37 E-value=6.4e-12 Score=77.28 Aligned_cols=64 Identities=22% Similarity=0.474 Sum_probs=57.2
Q ss_pred eEEEEEE-cCCCHhHHHHHHHHHhCCCCceEEEEeCCCcEEEEEec--CCHHHHHHHHHHhhCCceEe
Q 031705 27 QTVEVKV-RIDCEGCERKVKRAVEGMKGVKQVDVERKANKVTVVGY--VEPSKVVSRIAHRTGKKAEI 91 (154)
Q Consensus 27 ~~~~l~V-gm~C~~C~~kI~kal~~~~GV~~v~vd~~~~~v~V~g~--~~~~~v~~~i~~~~G~~a~~ 91 (154)
+++.|.| ||+|.+|+.+|+++|.+++||.++.+|+..++++|... ++.+.|.+.|+ ++||.+.+
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~-~~G~~~~~ 69 (71)
T 2xmw_A 3 QTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVE-RAGYHARV 69 (71)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEC---CHHHHHHHHH-HHTCEEEE
T ss_pred cEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCHHHHHHHHH-HcCCCcee
Confidence 4578999 99999999999999999999999999999999999743 67889999999 99998765
No 12
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A
Probab=99.36 E-value=5.5e-12 Score=77.92 Aligned_cols=66 Identities=27% Similarity=0.411 Sum_probs=59.0
Q ss_pred ceEEEEEE-cCCCHhHHHHHHHHHhCCCCceEEEEeCCCcEEEEEe---cCCHHHHHHHHHHhhCCceEec
Q 031705 26 LQTVEVKV-RIDCEGCERKVKRAVEGMKGVKQVDVERKANKVTVVG---YVEPSKVVSRIAHRTGKKAEIW 92 (154)
Q Consensus 26 ~~~~~l~V-gm~C~~C~~kI~kal~~~~GV~~v~vd~~~~~v~V~g---~~~~~~v~~~i~~~~G~~a~~~ 92 (154)
++++.|.| ||+|.+|+.+|+++|.+++||.++.+|+..++++|.. .++.+.|.+.|+ ++||.+.+.
T Consensus 2 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~ 71 (72)
T 1osd_A 2 TQTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATA-DAGYPSSVK 71 (72)
T ss_dssp EEEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHH-HTTCCCEEC
T ss_pred ceEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-hcCCCeEec
Confidence 45678999 9999999999999999999999999999999999974 367899999999 999987653
No 13
>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A
Probab=99.35 E-value=9.7e-12 Score=77.55 Aligned_cols=66 Identities=30% Similarity=0.353 Sum_probs=58.6
Q ss_pred ceEEEEEE-cCCCHhHHHHHHHHHhCCCCceEEEEeCCCcEEEEEecC-CHHHHHHHHHHhhCCceEec
Q 031705 26 LQTVEVKV-RIDCEGCERKVKRAVEGMKGVKQVDVERKANKVTVVGYV-EPSKVVSRIAHRTGKKAEIW 92 (154)
Q Consensus 26 ~~~~~l~V-gm~C~~C~~kI~kal~~~~GV~~v~vd~~~~~v~V~g~~-~~~~v~~~i~~~~G~~a~~~ 92 (154)
|.++.|.| ||+|.+|+.+|+++|.+++||..+.+|+..++++|.... ..+.|.+.|+ ++||.+...
T Consensus 2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~~~~~i~~~i~-~~Gy~~~~~ 69 (73)
T 1mwy_A 2 GTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQ-KAGYSLRDE 69 (73)
T ss_dssp CEEEEEEEESCCSTTHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCCHHHHHHHHH-HHTCEEEEC
T ss_pred CeEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCHHHHHHHHH-HcCCccccc
Confidence 67788999 999999999999999999999999999999999998542 3678999999 999987653
No 14
>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A
Probab=99.35 E-value=7.4e-12 Score=77.33 Aligned_cols=65 Identities=20% Similarity=0.338 Sum_probs=58.3
Q ss_pred eEEEEEE-cCCCHhHHHHHHHHHhCCCCceEEEEeCCCcEEEEEec---CCHHHHHHHHHHhhCCceEec
Q 031705 27 QTVEVKV-RIDCEGCERKVKRAVEGMKGVKQVDVERKANKVTVVGY---VEPSKVVSRIAHRTGKKAEIW 92 (154)
Q Consensus 27 ~~~~l~V-gm~C~~C~~kI~kal~~~~GV~~v~vd~~~~~v~V~g~---~~~~~v~~~i~~~~G~~a~~~ 92 (154)
++..|.| ||+|.+|+.+|+++|.+++||.++.+|+..++++|... ++.+.|.+.|+ ++||.+.+.
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~ 71 (72)
T 1aw0_A 3 QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIE-DMGFDATLS 71 (72)
T ss_dssp EEEEEEEECCCHHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHH-HHTCEEEEC
T ss_pred eEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCcCCHHHHHHHHH-HCCCCcEeC
Confidence 3568999 99999999999999999999999999999999999743 57899999999 999987654
No 15
>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A
Probab=99.33 E-value=6.5e-12 Score=82.49 Aligned_cols=67 Identities=16% Similarity=0.261 Sum_probs=60.0
Q ss_pred eEEEEEE-cCCCHhHHHHHHHHHhCCCCceEEEEeCCCcEEEEEe---cCCHHHHHHHHHHhh---CCceEeccc
Q 031705 27 QTVEVKV-RIDCEGCERKVKRAVEGMKGVKQVDVERKANKVTVVG---YVEPSKVVSRIAHRT---GKKAEIWPY 94 (154)
Q Consensus 27 ~~~~l~V-gm~C~~C~~kI~kal~~~~GV~~v~vd~~~~~v~V~g---~~~~~~v~~~i~~~~---G~~a~~~~~ 94 (154)
.++.|.| ||+|.+|+.+|+++|.+++||.++.+|+.+++++|.. .++.++|.++|+ ++ ||.+.++.+
T Consensus 3 ~~~~l~v~Gm~C~~C~~~Ie~~L~~~~GV~~v~v~l~~~~~~V~~~~~~~~~~~i~~~i~-~~g~Ggy~~~~~~~ 76 (90)
T 2g9o_A 3 STATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKAIE-AVSPGLYRVSITSE 76 (90)
T ss_dssp EEEEEEEESCCHHHHHHHHHHHHTTCTTEEEEEEETTTTEEEEEECCSSCCTHHHHHHHH-TTSTTTCEEECCCC
T ss_pred cEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHH-hccCCCeEEEEeCC
Confidence 3467999 9999999999999999999999999999999999974 367889999999 99 598888775
No 16
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A
Probab=99.33 E-value=1.4e-11 Score=76.93 Aligned_cols=65 Identities=20% Similarity=0.426 Sum_probs=58.8
Q ss_pred EEEEEE-cCCCHhHHHHHHHHHhCCCCceEEEEeCCCcEEEEEe---cCCHHHHHHHHHHhhCCceEecc
Q 031705 28 TVEVKV-RIDCEGCERKVKRAVEGMKGVKQVDVERKANKVTVVG---YVEPSKVVSRIAHRTGKKAEIWP 93 (154)
Q Consensus 28 ~~~l~V-gm~C~~C~~kI~kal~~~~GV~~v~vd~~~~~v~V~g---~~~~~~v~~~i~~~~G~~a~~~~ 93 (154)
++.|.| ||+|.+|+.+|+++|.+++||..+.+|+..++++|.. .++.++|.+.|+ ++||.+.+..
T Consensus 3 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~ 71 (75)
T 3cjk_B 3 SVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAID-DMGFDAVIHN 71 (75)
T ss_dssp EEEEEECCCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-HTTCCEEEEE
T ss_pred EEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCceEeec
Confidence 567999 9999999999999999999999999999999999974 357899999999 9999987654
No 17
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A
Probab=99.33 E-value=1.3e-11 Score=74.83 Aligned_cols=63 Identities=25% Similarity=0.432 Sum_probs=56.6
Q ss_pred ceEEEEEE-cCCCHhHHHHHHHHHhCCCCceEEEEeCCCcEEEEEe---cCCHHHHHHHHHHhhCCce
Q 031705 26 LQTVEVKV-RIDCEGCERKVKRAVEGMKGVKQVDVERKANKVTVVG---YVEPSKVVSRIAHRTGKKA 89 (154)
Q Consensus 26 ~~~~~l~V-gm~C~~C~~kI~kal~~~~GV~~v~vd~~~~~v~V~g---~~~~~~v~~~i~~~~G~~a 89 (154)
|.+..|.| ||+|.+|+.+|+++|.+++||..+.+|+..++++|.. .++.+.|.+.|+ ++||.+
T Consensus 1 m~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~ 67 (69)
T 2qif_A 1 MEQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIE-DQGYDV 67 (69)
T ss_dssp CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-HTTCEE
T ss_pred CeEEEEEECCcccHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCCc
Confidence 35668999 9999999999999999999999999999999999973 367889999999 999865
No 18
>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A
Probab=99.32 E-value=1.2e-11 Score=76.83 Aligned_cols=67 Identities=18% Similarity=0.422 Sum_probs=60.2
Q ss_pred CceEEEEEE-cCCCHhHHHHHHHHHhCCCCceEEEEeCCCcEEEEEe---cCCHHHHHHHHHHhhCCceEec
Q 031705 25 QLQTVEVKV-RIDCEGCERKVKRAVEGMKGVKQVDVERKANKVTVVG---YVEPSKVVSRIAHRTGKKAEIW 92 (154)
Q Consensus 25 ~~~~~~l~V-gm~C~~C~~kI~kal~~~~GV~~v~vd~~~~~v~V~g---~~~~~~v~~~i~~~~G~~a~~~ 92 (154)
.+.+..|.| ||+|.+|+.+|+++|.+++||..+.+|+..++++|.. .++.+.|.+.|+ ++||.+.++
T Consensus 4 ~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~ 74 (76)
T 1opz_A 4 EQKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIE-KLGYHVVIE 74 (76)
T ss_dssp CCEEEEEEEESCCSTTHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHH-HHTCEEECC
T ss_pred cceEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HCCCceecC
Confidence 467788999 9999999999999999999999999999999999973 357899999999 999987654
No 19
>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A
Probab=99.32 E-value=4.2e-12 Score=80.03 Aligned_cols=67 Identities=19% Similarity=0.321 Sum_probs=60.8
Q ss_pred ceEEEEEE-cCCCHhHHHHHHHHHhCCCCceEEEEeCCCcEEEEEe---cCCHHHHHHHHHHhhCCceEecc
Q 031705 26 LQTVEVKV-RIDCEGCERKVKRAVEGMKGVKQVDVERKANKVTVVG---YVEPSKVVSRIAHRTGKKAEIWP 93 (154)
Q Consensus 26 ~~~~~l~V-gm~C~~C~~kI~kal~~~~GV~~v~vd~~~~~v~V~g---~~~~~~v~~~i~~~~G~~a~~~~ 93 (154)
|+++.|.| ||+|.+|+.+|+++|.+++||..+.+|+..++++|.. .++.+.|.+.|+ ++||.+.++.
T Consensus 2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~ 72 (77)
T 1y3j_A 2 SSKCYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIR-ELGFGATVIE 72 (77)
T ss_dssp CEEEEEEESCGGGCSHHHHHHHHHTTSSSEEECCCBTTTTBEEEEECTTTSCHHHHHHHHH-HHTSCEEEES
T ss_pred CEEEEEEECCeeCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCceEECC
Confidence 67789999 9999999999999999999999999999999999974 257889999999 9999987764
No 20
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A
Probab=99.32 E-value=9.2e-12 Score=78.72 Aligned_cols=69 Identities=19% Similarity=0.387 Sum_probs=61.3
Q ss_pred CCceEEEEEE-cCCCHhHHHHHHHHHhCCCCceEEEEeCCCcEEEEEec---CCHHHHHHHHHHhhCCceEecc
Q 031705 24 RQLQTVEVKV-RIDCEGCERKVKRAVEGMKGVKQVDVERKANKVTVVGY---VEPSKVVSRIAHRTGKKAEIWP 93 (154)
Q Consensus 24 ~~~~~~~l~V-gm~C~~C~~kI~kal~~~~GV~~v~vd~~~~~v~V~g~---~~~~~v~~~i~~~~G~~a~~~~ 93 (154)
..+.++.|.| ||+|.+|+.+|+++|.+++||.++.+|+..++++|... ++.++|.++|+ ++||.+.+..
T Consensus 5 ~~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~ 77 (79)
T 1kvi_A 5 MGVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAID-DMGFDAVIHN 77 (79)
T ss_dssp TTCEEEEEEECCCCSTTTHHHHHHHHHHSSSCCCEEEEGGGTEEEEEECTTTCCHHHHHHHHH-HHCCCEEECC
T ss_pred CCcEEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHH-HCCCceEecC
Confidence 3466788999 99999999999999999999999999999999999742 57899999999 9999887654
No 21
>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A
Probab=99.32 E-value=9.4e-12 Score=80.19 Aligned_cols=68 Identities=18% Similarity=0.343 Sum_probs=61.2
Q ss_pred ceEEEEEE-cCCCHhHHHHHHHHHhCCCCceEEEEeCCCcEEEEEec---CCHHHHHHHHHHhhCCceEeccc
Q 031705 26 LQTVEVKV-RIDCEGCERKVKRAVEGMKGVKQVDVERKANKVTVVGY---VEPSKVVSRIAHRTGKKAEIWPY 94 (154)
Q Consensus 26 ~~~~~l~V-gm~C~~C~~kI~kal~~~~GV~~v~vd~~~~~v~V~g~---~~~~~v~~~i~~~~G~~a~~~~~ 94 (154)
..++.|.| ||+|.+|+.+|+++|.+++||..+.+|+..++++|... ++.+.|.+.|+ ++||.+.++..
T Consensus 8 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~~ 79 (84)
T 1q8l_A 8 EVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIE-AMGFPAFVKKQ 79 (84)
T ss_dssp CEEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHH-HTTCCEECSCC
T ss_pred ceEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCceEecCC
Confidence 35678999 99999999999999999999999999999999999843 57899999999 99999887764
No 22
>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B
Probab=99.31 E-value=1.2e-11 Score=76.32 Aligned_cols=65 Identities=23% Similarity=0.401 Sum_probs=59.1
Q ss_pred EEEEEE-cCCCHhHHHHHHHHHhCCCCceEEEEeCCCcEEEEEe--cCCHHHHHHHHHHhhCCceEecc
Q 031705 28 TVEVKV-RIDCEGCERKVKRAVEGMKGVKQVDVERKANKVTVVG--YVEPSKVVSRIAHRTGKKAEIWP 93 (154)
Q Consensus 28 ~~~l~V-gm~C~~C~~kI~kal~~~~GV~~v~vd~~~~~v~V~g--~~~~~~v~~~i~~~~G~~a~~~~ 93 (154)
++.|.| ||+|.+|+.+|+++|.+++||.++.+|+..++++|.. .++.+.|.+.|+ ++||.+.++.
T Consensus 3 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~-~~G~~~~~~~ 70 (72)
T 1fvq_A 3 EVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIE-DCGFDCEILR 70 (72)
T ss_dssp EEEEEECSCCSHHHHHHHHHHHHTSSSEEEECCBTTTTEEEEEECTTSCHHHHHHHHH-HHTCCEEEEE
T ss_pred EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHH-HCCCceEEcc
Confidence 467999 9999999999999999999999999999999999974 367899999999 9999988774
No 23
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1
Probab=99.29 E-value=1.6e-11 Score=74.81 Aligned_cols=61 Identities=31% Similarity=0.515 Sum_probs=56.0
Q ss_pred EEEE-cCCCHhHHHHHHHHHhCCCCceEEEEeCCCcEEEEEec---CCHHHHHHHHHHhhCCceEe
Q 031705 30 EVKV-RIDCEGCERKVKRAVEGMKGVKQVDVERKANKVTVVGY---VEPSKVVSRIAHRTGKKAEI 91 (154)
Q Consensus 30 ~l~V-gm~C~~C~~kI~kal~~~~GV~~v~vd~~~~~v~V~g~---~~~~~v~~~i~~~~G~~a~~ 91 (154)
.|.| ||+|.+|+.+|+++|.+++||..+.+|+..++++|... ++.++|.+.|+ ++||.+++
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~ 67 (68)
T 1cpz_A 3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAIN-ELGYQAEV 67 (68)
T ss_dssp EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-TTSSCEEE
T ss_pred EEEECCeeCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCCccc
Confidence 5889 99999999999999999999999999999999999743 67899999999 99998765
No 24
>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A
Probab=99.28 E-value=1.9e-11 Score=77.09 Aligned_cols=68 Identities=18% Similarity=0.327 Sum_probs=60.8
Q ss_pred ceEEEEEE-cCCCHhHHHHHHHHHhCCCCceEEEEeCCCcEEEEEe---cCCHHHHHHHHHHhhCCceEeccc
Q 031705 26 LQTVEVKV-RIDCEGCERKVKRAVEGMKGVKQVDVERKANKVTVVG---YVEPSKVVSRIAHRTGKKAEIWPY 94 (154)
Q Consensus 26 ~~~~~l~V-gm~C~~C~~kI~kal~~~~GV~~v~vd~~~~~v~V~g---~~~~~~v~~~i~~~~G~~a~~~~~ 94 (154)
|.+..|.| ||+|.+|+.+|+++|.+++||..+.+|+..++++|.. .++.+.|.+.|+ ++||.+.++..
T Consensus 2 m~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~~~ 73 (80)
T 1jww_A 2 TEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVD-KLGYKLKLKGE 73 (80)
T ss_dssp CEEEEEEEESCCCHHHHHHHHHHHHTSTTEEECCCCSSSSEEEEEECTTTCCHHHHHHHHH-HHTSEEEECCS
T ss_pred ceEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCeEEecCc
Confidence 55678999 9999999999999999999999999999999999973 357889999999 99999887653
No 25
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A
Probab=99.28 E-value=1.9e-11 Score=75.02 Aligned_cols=62 Identities=24% Similarity=0.425 Sum_probs=56.1
Q ss_pred EEEE-cCCCHhHHHHHHHHHhCCCCceEEEEeCCCcEEEEEec--CCHHHHHHHHHHhhCCceEec
Q 031705 30 EVKV-RIDCEGCERKVKRAVEGMKGVKQVDVERKANKVTVVGY--VEPSKVVSRIAHRTGKKAEIW 92 (154)
Q Consensus 30 ~l~V-gm~C~~C~~kI~kal~~~~GV~~v~vd~~~~~v~V~g~--~~~~~v~~~i~~~~G~~a~~~ 92 (154)
+|.| ||+|.+|+.+|+++|.+++||.++.+|+..++++|... .+.++|.+.|+ ++||.+.+.
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~-~~Gy~~~~~ 67 (69)
T 2kt2_A 3 HLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPGTSPDALTAAVA-GLGYKATLA 67 (69)
T ss_dssp CEEEESSCSTHHHHHHHHHHHHSTTEEEEEEETTTTEEEEEECTTSCHHHHHHHHH-TTTSEEECC
T ss_pred EEEECCcccHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCHHHHHHHHH-HCCCceEeC
Confidence 4889 99999999999999999999999999999999998743 57899999999 999987654
No 26
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}
Probab=99.26 E-value=2.6e-11 Score=73.47 Aligned_cols=61 Identities=21% Similarity=0.376 Sum_probs=55.0
Q ss_pred EEEEEE-cCCCHhHHHHHHHHHhCCCCceEEEEeCCCcEEEEEec--CCHHHHHHHHHHhhCCce
Q 031705 28 TVEVKV-RIDCEGCERKVKRAVEGMKGVKQVDVERKANKVTVVGY--VEPSKVVSRIAHRTGKKA 89 (154)
Q Consensus 28 ~~~l~V-gm~C~~C~~kI~kal~~~~GV~~v~vd~~~~~v~V~g~--~~~~~v~~~i~~~~G~~a 89 (154)
+.+|.| ||+|.+|+.+|+++|.+++||..+.+|+..++++|... .+.++|.+.|+ ++||.+
T Consensus 2 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~-~~G~~~ 65 (66)
T 1yg0_A 2 KATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPATQDLIKEALL-DAGQEV 65 (66)
T ss_dssp EEEECCTTCSCSHHHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTCCHHHHHHHHH-HHTCCC
T ss_pred eEEEEECCcccHHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEECCCCCHHHHHHHHH-HcCCCc
Confidence 357899 99999999999999999999999999999999999743 47889999999 999864
No 27
>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}
Probab=99.26 E-value=1.7e-11 Score=74.96 Aligned_cols=64 Identities=30% Similarity=0.498 Sum_probs=57.3
Q ss_pred ceEEEEEE-cCCCHhHHHHHHHHHhCCCCceEEEEeCCCcEEEEEe---cCCHHHHHHHHHHhhCCceE
Q 031705 26 LQTVEVKV-RIDCEGCERKVKRAVEGMKGVKQVDVERKANKVTVVG---YVEPSKVVSRIAHRTGKKAE 90 (154)
Q Consensus 26 ~~~~~l~V-gm~C~~C~~kI~kal~~~~GV~~v~vd~~~~~v~V~g---~~~~~~v~~~i~~~~G~~a~ 90 (154)
+.+..|.| ||+|.+|+.+|+++|.+++||..+.+|+..++++|.. .++.+.+.+.|+ ++||.+.
T Consensus 2 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~ 69 (71)
T 2ldi_A 2 LKTQQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIA-ALGYTLA 69 (71)
T ss_dssp CEEEEEEEETCTTSGGGHHHHTGGGGCSSEEEEEEETTTTEEEEEECTTTCCTHHHHHHHH-TTTCEEE
T ss_pred cEEEEEEECCccCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCCcc
Confidence 45678999 9999999999999999999999999999999999973 357788999999 9999764
No 28
>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}
Probab=99.25 E-value=1.3e-11 Score=75.86 Aligned_cols=61 Identities=25% Similarity=0.426 Sum_probs=54.9
Q ss_pred EEEEE-cCCCHhHHHHHHHHHhCCCCceEEEEeCCCcEEEEEecCCHHHHHHHHHHhhCCceEec
Q 031705 29 VEVKV-RIDCEGCERKVKRAVEGMKGVKQVDVERKANKVTVVGYVEPSKVVSRIAHRTGKKAEIW 92 (154)
Q Consensus 29 ~~l~V-gm~C~~C~~kI~kal~~~~GV~~v~vd~~~~~v~V~g~~~~~~v~~~i~~~~G~~a~~~ 92 (154)
..|.| ||+|.+|+.+|+++|.++ ||..+.+|+..++++|....+ ++|.++|+ ++||.+.+.
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~-gv~~~~v~~~~~~~~v~~~~~-~~i~~~i~-~~Gy~~~~~ 64 (67)
T 2kyz_A 3 YVLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETENL-DSVLKKLE-EIDYPVESY 64 (67)
T ss_dssp EEEECGGGGSHHHHHHHHHHHHHH-TCSEEEEETTTTEEEEECSCH-HHHHHHHH-TTTCCCCBC
T ss_pred EEEEECCcCcHHHHHHHHHHHHHc-CCeEEEEECCCCEEEEEECCH-HHHHHHHH-HcCCceeeE
Confidence 57999 999999999999999999 999999999999999986544 88999999 999986543
No 29
>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}
Probab=99.25 E-value=6.4e-11 Score=78.08 Aligned_cols=72 Identities=21% Similarity=0.286 Sum_probs=63.7
Q ss_pred hcCCceEEEEEE-cCCCHhHHHHHHHHHhCCCCceEEEEeCCCcEEEEEec---CCHHHHHHHHHHhhCCceEeccc
Q 031705 22 KRRQLQTVEVKV-RIDCEGCERKVKRAVEGMKGVKQVDVERKANKVTVVGY---VEPSKVVSRIAHRTGKKAEIWPY 94 (154)
Q Consensus 22 ~~~~~~~~~l~V-gm~C~~C~~kI~kal~~~~GV~~v~vd~~~~~v~V~g~---~~~~~v~~~i~~~~G~~a~~~~~ 94 (154)
....|.++.|.| ||+|.+|+.+|+++|..++||..+.+|+..++++|... ++.+.|.+.|+ .+||.+.++..
T Consensus 11 ~~~~~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~~ 86 (95)
T 2kkh_A 11 KVKKLQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISPFQIAKALN-EARLEANVRVN 86 (95)
T ss_dssp CSSCSEEEEEEETTCCTTTTHHHHHHHHHHSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-HHTCCEEESCC
T ss_pred cccceEEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHH-HcCCceEEecC
Confidence 345678889999 99999999999999999999999999999999999843 57889999999 99999877654
No 30
>2ofg_X Zinc-transporting ATPase; ferredoxin-like fold, beta-alpha-beta-BETA-alpha-beta, struc genomics, hydrolase, membrane protein; NMR {Synechocystis SP} PDB: 2ofh_X
Probab=99.23 E-value=5.5e-11 Score=81.10 Aligned_cols=67 Identities=28% Similarity=0.431 Sum_probs=60.2
Q ss_pred CceEEEEEE-cCCCHhHHHHHHHHHhCCCCceEEEEeCCCcEEEEEec---CCHHHHHHHHHHhhCCceEec
Q 031705 25 QLQTVEVKV-RIDCEGCERKVKRAVEGMKGVKQVDVERKANKVTVVGY---VEPSKVVSRIAHRTGKKAEIW 92 (154)
Q Consensus 25 ~~~~~~l~V-gm~C~~C~~kI~kal~~~~GV~~v~vd~~~~~v~V~g~---~~~~~v~~~i~~~~G~~a~~~ 92 (154)
.|.+++|.| ||+|.+|+.+|+++|.+++||..+.+|+.+++++|... ++.+.|.+.|+ ++||.+...
T Consensus 6 ~~~~~~l~v~Gm~C~~Ca~~Ie~~L~~~~GV~~v~v~~~~~~~~V~~~~~~~~~~~i~~~i~-~~Gy~~~~~ 76 (111)
T 2ofg_X 6 PLKTQQMQVGGMDCTSCKLKIEGSLERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIA-ALGYTLAEP 76 (111)
T ss_dssp CCEEEEEEESCCCGGGTHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTTCSHHHHHHHHH-TTTCCEECC
T ss_pred cceEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEECCCCEEEEEECCCCCCHHHHHHHHH-HcCCeeeec
Confidence 367789999 99999999999999999999999999999999999743 57899999999 999987653
No 31
>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A
Probab=99.22 E-value=3.7e-11 Score=74.67 Aligned_cols=64 Identities=19% Similarity=0.396 Sum_probs=57.0
Q ss_pred EEEEEE-cCCCHhHHHHHHHHHhCCCCceEEEEeCCCcEEEEEec---CCHHHHHHHHHHhhCCceEec
Q 031705 28 TVEVKV-RIDCEGCERKVKRAVEGMKGVKQVDVERKANKVTVVGY---VEPSKVVSRIAHRTGKKAEIW 92 (154)
Q Consensus 28 ~~~l~V-gm~C~~C~~kI~kal~~~~GV~~v~vd~~~~~v~V~g~---~~~~~v~~~i~~~~G~~a~~~ 92 (154)
++.|.| ||+|.+|+.+|+++|.+++||..+.+|+..++++|... ++.+.|.+.|+ ++||.+.+.
T Consensus 5 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~ 72 (75)
T 1yjr_A 5 VLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHTIE-SLGFEPSLV 72 (75)
T ss_dssp CEEEEEETCCTTTHHHHHHHHHTTSTTEEEEEEETTTTEEEEEECTTTTHHHHHHHHHH-HHHCEEEES
T ss_pred EEEEEECCcccHHHHHHHHHHHHcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCCceee
Confidence 457999 99999999999999999999999999999999999743 46788999999 999987654
No 32
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=99.21 E-value=6.6e-11 Score=83.23 Aligned_cols=65 Identities=17% Similarity=0.363 Sum_probs=59.2
Q ss_pred eEEEEEE-cCCCHhHHHHHHHHHhCCCCceEEEEeCCCcEEEEEec---CCHHHHHHHHHHhhCCceEec
Q 031705 27 QTVEVKV-RIDCEGCERKVKRAVEGMKGVKQVDVERKANKVTVVGY---VEPSKVVSRIAHRTGKKAEIW 92 (154)
Q Consensus 27 ~~~~l~V-gm~C~~C~~kI~kal~~~~GV~~v~vd~~~~~v~V~g~---~~~~~v~~~i~~~~G~~a~~~ 92 (154)
.++.|.| ||+|.+|+.+|+++|++++||.++.+|+.+++++|... +++++|.++|+ ++||.+.++
T Consensus 80 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~ 148 (149)
T 2ew9_A 80 GNIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPRDIIKIIE-EIGFHASLA 148 (149)
T ss_dssp SEEEEEEESCCSHHHHHHHHHHHHHSSSCCEEEEETTTTEEEEECCTTTSCHHHHHHHHH-HHTCEEECC
T ss_pred ceeEEEEEeccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEECCCCCCHHHHHHHHH-hCCCceEec
Confidence 4678999 99999999999999999999999999999999999843 68899999999 999987654
No 33
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=99.18 E-value=9.2e-11 Score=82.88 Aligned_cols=68 Identities=18% Similarity=0.327 Sum_probs=61.6
Q ss_pred ceEEEEEE-cCCCHhHHHHHHHHHhCCCCceEEEEeCCCcEEEEEe---cCCHHHHHHHHHHhhCCceEeccc
Q 031705 26 LQTVEVKV-RIDCEGCERKVKRAVEGMKGVKQVDVERKANKVTVVG---YVEPSKVVSRIAHRTGKKAEIWPY 94 (154)
Q Consensus 26 ~~~~~l~V-gm~C~~C~~kI~kal~~~~GV~~v~vd~~~~~v~V~g---~~~~~~v~~~i~~~~G~~a~~~~~ 94 (154)
..++.|.| ||+|.+|+.+|+++|.+++||.++.+|+.+++++|.. .+++++|.++|+ ++||.+.++..
T Consensus 73 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~~ 144 (151)
T 1p6t_A 73 TEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVD-KLGYKLKLKGE 144 (151)
T ss_dssp CEEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHH-HHTCCEEESCS
T ss_pred ccccEEEecCCCCHHHHHHHHHHHhcCCCceEEEEEccCCEEEEEECCCCCCHHHHHHHHH-HcCCCeEEcCc
Confidence 45678999 9999999999999999999999999999999999983 468999999999 99999887654
No 34
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=99.16 E-value=1.7e-10 Score=88.29 Aligned_cols=70 Identities=19% Similarity=0.382 Sum_probs=63.5
Q ss_pred eEEEEEEcCCCHhHHHHHHHHHhCCCCceEEEEeCCCcEEEEEecCCHHHHHHHHHHhhCCceEecccCCC
Q 031705 27 QTVEVKVRIDCEGCERKVKRAVEGMKGVKQVDVERKANKVTVVGYVEPSKVVSRIAHRTGKKAEIWPYVPY 97 (154)
Q Consensus 27 ~~~~l~Vgm~C~~C~~kI~kal~~~~GV~~v~vd~~~~~v~V~g~~~~~~v~~~i~~~~G~~a~~~~~~p~ 97 (154)
.+++|+|.|+|.+|+.+|+++|++++||.++++|+.+++++|.+.+++++|.++|+ ++||++.++...+.
T Consensus 6 ~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aI~-~~Gy~a~~~~~~~~ 75 (222)
T 1qup_A 6 YEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLR-NCGKDAIIRGAGKP 75 (222)
T ss_dssp EEEEEECCCCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHH-HTTCCCEEECCSCT
T ss_pred eEEEEEEccccHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEeccCCHHHHHHHHH-HcCCccccccCCCc
Confidence 34578888999999999999999999999999999999999998889999999999 99999988876443
No 35
>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A
Probab=99.10 E-value=1.9e-10 Score=71.26 Aligned_cols=58 Identities=26% Similarity=0.493 Sum_probs=51.0
Q ss_pred EEEEEE-cCCCHhHHHHHHHHHhCCCCceEEEEeCCCcEEEEEecCCHHHHHHHHHHhhCCceE
Q 031705 28 TVEVKV-RIDCEGCERKVKRAVEGMKGVKQVDVERKANKVTVVGYVEPSKVVSRIAHRTGKKAE 90 (154)
Q Consensus 28 ~~~l~V-gm~C~~C~~kI~kal~~~~GV~~v~vd~~~~~v~V~g~~~~~~v~~~i~~~~G~~a~ 90 (154)
+..|.| ||+|.+|+.+|+++|.+++||.++.+|+..++++|....+ .+.|+ ++||.+.
T Consensus 4 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~----~~~i~-~~Gy~~~ 62 (71)
T 2aj0_A 4 KTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEAS----IQQVE-QAGAFEH 62 (71)
T ss_dssp EEEEEEESCCCHHHHHHHHHHHHHSTTEEEEEECCSSEEEEEEESCC----HHHHH-HHHTTTT
T ss_pred EEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEECCCCEEEEEecCc----HHHHH-HhCCCcc
Confidence 567999 9999999999999999999999999999999999987654 45777 8998643
No 36
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=99.09 E-value=5.4e-10 Score=83.29 Aligned_cols=67 Identities=19% Similarity=0.406 Sum_probs=60.0
Q ss_pred eEEEEEE-cCCCHhHHHHHHHHHhCCCCceEEEEeCCCcEEEEEe---cCCHHHHHHHHHHhhCCceEeccc
Q 031705 27 QTVEVKV-RIDCEGCERKVKRAVEGMKGVKQVDVERKANKVTVVG---YVEPSKVVSRIAHRTGKKAEIWPY 94 (154)
Q Consensus 27 ~~~~l~V-gm~C~~C~~kI~kal~~~~GV~~v~vd~~~~~v~V~g---~~~~~~v~~~i~~~~G~~a~~~~~ 94 (154)
.++.|.| ||+|.+|+.+|+++|.+++||..+.+|+..++++|.. .++.++|.+.|+ ++||.+.++..
T Consensus 122 ~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~~ 192 (202)
T 2rop_A 122 STTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISPEELRAAIE-DMGFEASVVSE 192 (202)
T ss_dssp EEEEEEESCCCSTHHHHHHHHHGGGSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-HHTSCEEEC--
T ss_pred eEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHH-HcCCceEEcCC
Confidence 5678999 9999999999999999999999999999999999974 368899999999 99999888764
No 37
>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=99.06 E-value=6.2e-10 Score=86.58 Aligned_cols=70 Identities=19% Similarity=0.382 Sum_probs=63.2
Q ss_pred eEEEEEEcCCCHhHHHHHHHHHhCCCCceEEEEeCCCcEEEEEecCCHHHHHHHHHHhhCCceEecccCCC
Q 031705 27 QTVEVKVRIDCEGCERKVKRAVEGMKGVKQVDVERKANKVTVVGYVEPSKVVSRIAHRTGKKAEIWPYVPY 97 (154)
Q Consensus 27 ~~~~l~Vgm~C~~C~~kI~kal~~~~GV~~v~vd~~~~~v~V~g~~~~~~v~~~i~~~~G~~a~~~~~~p~ 97 (154)
.+++|+|.|+|.+|+.+|+++|++++||.++++|+.+++++|.+.+++++|.++|+ ++||.+.++...+.
T Consensus 7 ~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aIe-~~Gy~a~~~~~~~~ 76 (249)
T 1jk9_B 7 YEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLR-NCGKDAIIRGAGKP 76 (249)
T ss_dssp EEEEEECCCCSSSHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHH-TTTCCCEEEEESST
T ss_pred eeEEEEEeeccHHHHHHHHHHHhccCCeeEEEEEcCCCeEEEecCCCHHHHHHHHH-HhCCCcccccCCcc
Confidence 34578888999999999999999999999999999999999998889999999999 99999988776443
No 38
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=99.04 E-value=1e-09 Score=77.06 Aligned_cols=67 Identities=21% Similarity=0.336 Sum_probs=60.2
Q ss_pred ceEEEEEE-cCCCHhHHHHHHHHHhCCCCceEEEEeCCCcEEEEEe---cCCHHHHHHHHHHhhCCceEecc
Q 031705 26 LQTVEVKV-RIDCEGCERKVKRAVEGMKGVKQVDVERKANKVTVVG---YVEPSKVVSRIAHRTGKKAEIWP 93 (154)
Q Consensus 26 ~~~~~l~V-gm~C~~C~~kI~kal~~~~GV~~v~vd~~~~~v~V~g---~~~~~~v~~~i~~~~G~~a~~~~ 93 (154)
|++++|.| ||+|.+|+.+|+++|.+++||..+.+|+..++++|.. ..+.+.+.+.|+ ++||.+.+..
T Consensus 3 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~~ 73 (149)
T 2ew9_A 3 PQKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQ-DLGFEAAVME 73 (149)
T ss_dssp CEEEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEETTTTEEEEEECTTTCCHHHHHHHHH-HHTCEEEECS
T ss_pred cEEEEEEECCeecHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEEcCCCCCHHHHHHHHh-cCCCceEeec
Confidence 67889999 9999999999999999999999999999999999874 357889999999 9999887643
No 39
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=98.77 E-value=1.6e-08 Score=75.20 Aligned_cols=65 Identities=15% Similarity=0.346 Sum_probs=55.9
Q ss_pred CceEEEEEE-cCCCHhHHHHHHHHHhCCCCceEEEEeCCCcEEEEEec---CCHHHHHHHHHHhh---CCceE
Q 031705 25 QLQTVEVKV-RIDCEGCERKVKRAVEGMKGVKQVDVERKANKVTVVGY---VEPSKVVSRIAHRT---GKKAE 90 (154)
Q Consensus 25 ~~~~~~l~V-gm~C~~C~~kI~kal~~~~GV~~v~vd~~~~~v~V~g~---~~~~~v~~~i~~~~---G~~a~ 90 (154)
.+.++.|.| ||+|.+|+.+|+++|.+++||..+.+|+..++++|... ++.+.|.+.|+ ++ ||.+.
T Consensus 18 ~~~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~~~gg~~v~ 89 (202)
T 2rop_A 18 HVVTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSPVALQRAIE-ALPPGNFKVS 89 (202)
T ss_dssp --CEEEEEEESGGGSTHHHHHHHHTTSBTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHT-TSSSSCSEEE
T ss_pred ccEEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HhccCCeEEE
Confidence 466788999 99999999999999999999999999999999999742 67889999998 88 36554
No 40
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=98.76 E-value=4.2e-08 Score=69.00 Aligned_cols=63 Identities=17% Similarity=0.451 Sum_probs=55.7
Q ss_pred ceEEEEEE-cCCCHhHHHHHHHHHhCCCCceEEEEeCCCcEEEEEe---cCCHHHHHHHHHHhhCCce
Q 031705 26 LQTVEVKV-RIDCEGCERKVKRAVEGMKGVKQVDVERKANKVTVVG---YVEPSKVVSRIAHRTGKKA 89 (154)
Q Consensus 26 ~~~~~l~V-gm~C~~C~~kI~kal~~~~GV~~v~vd~~~~~v~V~g---~~~~~~v~~~i~~~~G~~a 89 (154)
+.+..|.| ||+|.+|+.+|+++|.+++||..+.+++..++++|.. ..+...+.+.|+ ++||.+
T Consensus 5 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~ 71 (151)
T 1p6t_A 5 QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIE-KLGYHV 71 (151)
T ss_dssp CEEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHH-HHTCEE
T ss_pred ceEEEEEECCCcCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEEcCCcCCHHHHHHHHH-HcCCcc
Confidence 45567999 9999999999999999999999999999999998863 357888999998 999865
No 41
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=98.68 E-value=4.5e-08 Score=86.07 Aligned_cols=64 Identities=19% Similarity=0.269 Sum_probs=57.9
Q ss_pred EEEEEE-cCCCHhHHHHHHHHHhCCCCceEEEEeCCCcEEEEEe---cCCHHHHHHHHHHhhCCceEec
Q 031705 28 TVEVKV-RIDCEGCERKVKRAVEGMKGVKQVDVERKANKVTVVG---YVEPSKVVSRIAHRTGKKAEIW 92 (154)
Q Consensus 28 ~~~l~V-gm~C~~C~~kI~kal~~~~GV~~v~vd~~~~~v~V~g---~~~~~~v~~~i~~~~G~~a~~~ 92 (154)
+++|+| ||+|++|+.+|+++|++++||.++++|+.+++++|.. .++.+++.++|+ +.||++...
T Consensus 3 ~~~l~V~GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~~~~~~~i~~ai~-~~Gy~~~~~ 70 (723)
T 3j09_A 3 ERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIE-DLGYGVVDE 70 (723)
T ss_dssp CEEEEEETCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-HHCCEESSC
T ss_pred eEEEEeCCCCchHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCCCcCCHHHHHHHHH-hcCCccccc
Confidence 357999 9999999999999999999999999999999999973 368999999999 999987543
No 42
>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1
Probab=92.17 E-value=0.61 Score=30.68 Aligned_cols=67 Identities=10% Similarity=0.199 Sum_probs=47.9
Q ss_pred CceEEEEEE-cCCCHhHHHHHHHHHhCCCCceEEEE-----eCCCcEEE--EEec-CCHHHHHHHHHHhhCCceEecc
Q 031705 25 QLQTVEVKV-RIDCEGCERKVKRAVEGMKGVKQVDV-----ERKANKVT--VVGY-VEPSKVVSRIAHRTGKKAEIWP 93 (154)
Q Consensus 25 ~~~~~~l~V-gm~C~~C~~kI~kal~~~~GV~~v~v-----d~~~~~v~--V~g~-~~~~~v~~~i~~~~G~~a~~~~ 93 (154)
.++++.|.| .-+-+. .-.+-++|.+++||..|++ |..+..+. |.|. ++.++|.++|+ +.|-.+.-+.
T Consensus 5 ~iRRlVLDVlKPh~P~-ivdlA~~l~~~~gV~gVnItV~EvD~eTe~lkItIEG~dIdfd~I~~~IE-~~GgvIHSID 80 (100)
T 3bpd_A 5 GLRRLVLDVLKPHEPK-TIVFALKLSELENVDGVNIHLSEIDQATENIKITILGNNLDYEQIKGVIE-DMGGVIHSVD 80 (100)
T ss_dssp SEEEEEEEEEEESCSC-HHHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHHH-TTTCEEEEEE
T ss_pred cceEEEEEecCCCCCC-HHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHH-HcCCeEEeee
Confidence 356777877 444433 4567788999999987754 44555444 4565 89999999999 9997766555
No 43
>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1
Probab=90.57 E-value=1.6 Score=28.58 Aligned_cols=67 Identities=12% Similarity=0.241 Sum_probs=47.8
Q ss_pred CceEEEEEE-cCCCHhHHHHHHHHHhCCCCceEEEE-----eCCCcEEEE--Eec-CCHHHHHHHHHHhhCCceEecc
Q 031705 25 QLQTVEVKV-RIDCEGCERKVKRAVEGMKGVKQVDV-----ERKANKVTV--VGY-VEPSKVVSRIAHRTGKKAEIWP 93 (154)
Q Consensus 25 ~~~~~~l~V-gm~C~~C~~kI~kal~~~~GV~~v~v-----d~~~~~v~V--~g~-~~~~~v~~~i~~~~G~~a~~~~ 93 (154)
.++++.|.| .-+-+. .-.+-++|.+++||..|++ |..+..+.| .|. ++.++|.++|+ +.|-.+.-+.
T Consensus 5 ~irRlVLDVlKPh~p~-i~d~A~~l~~~~gV~gVnItv~EvD~eTe~lkitiEG~~id~d~I~~~IE-~~Gg~IHSID 80 (97)
T 2raq_A 5 GLIRIVLDILKPHEPI-IPEYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGNDLDFDEITRAIE-SYGGSIHSVD 80 (97)
T ss_dssp SEEEEEEEEECCSCSC-HHHHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECSSCCHHHHHHHHH-HTTCEEEEEE
T ss_pred CceEEEEEecCCCCCC-HHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHH-HcCCeEEeee
Confidence 466778888 554443 4567788899999887654 455555444 565 89999999999 9997766554
No 44
>2x3d_A SSO6206; unknown function; 2.70A {Sulfolobus solfataricus}
Probab=87.09 E-value=2.1 Score=27.93 Aligned_cols=66 Identities=11% Similarity=0.221 Sum_probs=46.2
Q ss_pred ceEEEEEE-c-CCCHhHHHHHHHHHhCCCCceEEEE-----eCCCcEEE--EEec-CCHHHHHHHHHHhhCCceEecc
Q 031705 26 LQTVEVKV-R-IDCEGCERKVKRAVEGMKGVKQVDV-----ERKANKVT--VVGY-VEPSKVVSRIAHRTGKKAEIWP 93 (154)
Q Consensus 26 ~~~~~l~V-g-m~C~~C~~kI~kal~~~~GV~~v~v-----d~~~~~v~--V~g~-~~~~~v~~~i~~~~G~~a~~~~ 93 (154)
++++.|.| . ++-+. .-.+-++|.+++||..|++ |..+..+. |.|. ++.++|.++|+ +.|-.+.-+.
T Consensus 4 irRlVLDVlKP~h~P~-ivd~A~~l~~~~gV~gVnItv~EvD~eTe~lkItIEG~~idfd~I~~~IE-~~Gg~IHSID 79 (96)
T 2x3d_A 4 IRRLVLDVLKPIRGTS-IVDLAERISKLDGVEGVNISVTDMDVETMGLMIIIEGTSLNFDDIRKMLE-EEGCAIHSID 79 (96)
T ss_dssp EEEEEEEEEEESSSSC-HHHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEESSCCHHHHHHHHH-HTTCEEEEEE
T ss_pred eEEEEEEcccCCCCCC-HHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHH-HcCCeEEeee
Confidence 45566776 3 34444 4567788999999987754 44555444 4565 89999999999 9997665554
No 45
>3cq1_A Putative uncharacterized protein TTHB138; DTDP-4-keto-L-rhamnose reductase, plasmid, oxidoreductase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2cu6_A 3cq2_A 3cq3_A*
Probab=86.62 E-value=1 Score=29.47 Aligned_cols=35 Identities=29% Similarity=0.583 Sum_probs=27.6
Q ss_pred EEEEEEcCCCHhH------HHHHHHHHhCCCCceEEEEeCC
Q 031705 28 TVEVKVRIDCEGC------ERKVKRAVEGMKGVKQVDVERK 62 (154)
Q Consensus 28 ~~~l~Vgm~C~~C------~~kI~kal~~~~GV~~v~vd~~ 62 (154)
.+.+.+-+++++| ...|+.+|.+++||.+|+|++.
T Consensus 42 ~V~v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~V~V~l~ 82 (103)
T 3cq1_A 42 RAYVRMTLTTPGCPLHDSLGEAVRQALSRLPGVEEVEVEVT 82 (103)
T ss_dssp EEEEEECCSSSSCCSSCHHHHHHHHHHHTSTTCCEEEEEEC
T ss_pred EEEEEEEECCCCCcHHHHHHHHHHHHHHhCCCceeEEEEEe
Confidence 4566677777777 5678999999999999888653
No 46
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=84.16 E-value=4.2 Score=25.31 Aligned_cols=54 Identities=7% Similarity=0.074 Sum_probs=39.7
Q ss_pred EEEEE-cCCCHhHHHHHHHHHhCCCCceEEEEeCCCcEEEEE--ecCCHHHHHHHHHHhhCCceEec
Q 031705 29 VEVKV-RIDCEGCERKVKRAVEGMKGVKQVDVERKANKVTVV--GYVEPSKVVSRIAHRTGKKAEIW 92 (154)
Q Consensus 29 ~~l~V-gm~C~~C~~kI~kal~~~~GV~~v~vd~~~~~v~V~--g~~~~~~v~~~i~~~~G~~a~~~ 92 (154)
.++.+ |+.|+.-..+++++|.+++.-+ .+.|. .......|.+.++ +.|+.+...
T Consensus 11 ~~lD~rGl~CP~Pvl~~kkal~~l~~G~---------~l~V~~dd~~a~~di~~~~~-~~G~~~~~~ 67 (82)
T 3lvj_C 11 HTLDALGLRCPEPVMMVRKTVRNMQPGE---------TLLIIADDPATTRDIPGFCT-FMEHELVAK 67 (82)
T ss_dssp EEEECTTCCTTHHHHHHHHHHHTSCTTC---------EEEEEECCTTHHHHHHHHHH-HTTCEEEEE
T ss_pred EEEECCCCCCCHHHHHHHHHHHhCCCCC---------EEEEEECCccHHHHHHHHHH-HCCCEEEEE
Confidence 56888 9999999999999999884212 22332 2245678888888 999987654
No 47
>1uwd_A Hypothetical protein TM0487; similar to PAAD protein, alpha/beta fold,structural genomics joint center for structural genomics, JCSG; NMR {Thermotoga maritima} SCOP: d.52.8.2 PDB: 1wcj_A
Probab=83.82 E-value=1.6 Score=28.47 Aligned_cols=35 Identities=26% Similarity=0.461 Sum_probs=25.9
Q ss_pred EEEEEEcCCCHhH------HHHHHHHHhCCCCceEEEEeCC
Q 031705 28 TVEVKVRIDCEGC------ERKVKRAVEGMKGVKQVDVERK 62 (154)
Q Consensus 28 ~~~l~Vgm~C~~C------~~kI~kal~~~~GV~~v~vd~~ 62 (154)
.+.+.+-++.++| ...|+.+|.+++||.+|+|++.
T Consensus 43 ~V~v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~v~V~l~ 83 (103)
T 1uwd_A 43 NVKVLMTMTTPMCPLAGMILSDAEEAIKKIEGVNNVEVELT 83 (103)
T ss_dssp EEEEEECCSSSCCSSHHHHHHHHHHHHHTSSSCCEEEEEEC
T ss_pred EEEEEEEECCCCCcHHHHHHHHHHHHHHhCCCcceEEEEEe
Confidence 4556666666666 4568999999999999887643
No 48
>2jsx_A Protein NAPD; TAT, proofreading, cytoplasm, chaperone; NMR {Escherichia coli K12} PDB: 2pq4_A
Probab=82.47 E-value=6 Score=25.57 Aligned_cols=44 Identities=9% Similarity=0.184 Sum_probs=31.4
Q ss_pred hHHHHHHHHHhCCCCceEEEEeCCCcEEEEE-ecCCHHHHHHHHH
Q 031705 39 GCERKVKRAVEGMKGVKQVDVERKANKVTVV-GYVEPSKVVSRIA 82 (154)
Q Consensus 39 ~C~~kI~kal~~~~GV~~v~vd~~~~~v~V~-g~~~~~~v~~~i~ 82 (154)
+=...|.++|.+++||+-..++...+++.|+ ...+.+++.+.|+
T Consensus 17 ~~~~~V~~~L~~ipgvEi~~~~~~~GkiVV~iEa~~~~~l~~~i~ 61 (95)
T 2jsx_A 17 ERISDISTQLNAFPGCEVAVSDAPSGQLIVVVEAEDSETLIQTIE 61 (95)
T ss_dssp TSHHHHHHHHTTSTTEEEEEEETTTTEEEEEEEESSHHHHHHHHH
T ss_pred CCHHHHHHHHHCCCCeEEEEecCCCCCEEEEEEeCCHHHHHHHHH
Confidence 4478899999999999544456667888876 3346666666665
No 49
>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3
Probab=82.03 E-value=4.8 Score=26.11 Aligned_cols=55 Identities=16% Similarity=0.152 Sum_probs=40.6
Q ss_pred EEEEE-cCCCHhHHHHHHHHHhCCCCceEEEEeCCCcEEEEEe--cCCHHHHHHHHHHhhCCceEecc
Q 031705 29 VEVKV-RIDCEGCERKVKRAVEGMKGVKQVDVERKANKVTVVG--YVEPSKVVSRIAHRTGKKAEIWP 93 (154)
Q Consensus 29 ~~l~V-gm~C~~C~~kI~kal~~~~GV~~v~vd~~~~~v~V~g--~~~~~~v~~~i~~~~G~~a~~~~ 93 (154)
.+|.+ |+.|+.-..+++++|.+++.-+ .+.|.. ......|.+.++ +.|+.+....
T Consensus 27 ~~LD~rGl~CP~Pvl~tkkaL~~l~~Ge---------~L~Vl~dd~~a~~dI~~~~~-~~G~~v~~~e 84 (98)
T 1jdq_A 27 KTLDVRGEVCPVPDVETKRALQNMKPGE---------ILEVWIDYPMSKERIPETVK-KLGHEVLEIE 84 (98)
T ss_dssp EEEECSSCCSSHHHHHHHHHHHTCCTTC---------EEEEEESSCTHHHHHHHHHH-HSSCCEEEEE
T ss_pred EEEeCCCCCCCHHHHHHHHHHHhCCCCC---------EEEEEECCccHHHHHHHHHH-HCCCEEEEEE
Confidence 56899 9999999999999999974322 233332 235688888898 9999876543
No 50
>3hz7_A Uncharacterized protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Desulfitobacterium hafniense}
Probab=78.85 E-value=3.9 Score=25.92 Aligned_cols=53 Identities=17% Similarity=0.187 Sum_probs=39.4
Q ss_pred EEEE-cCCCHhHHHHHHHHHhCCC--CceEEEEeCCCcEEEEEe--cCCHHHHHHHHHHhhCCceEecc
Q 031705 30 EVKV-RIDCEGCERKVKRAVEGMK--GVKQVDVERKANKVTVVG--YVEPSKVVSRIAHRTGKKAEIWP 93 (154)
Q Consensus 30 ~l~V-gm~C~~C~~kI~kal~~~~--GV~~v~vd~~~~~v~V~g--~~~~~~v~~~i~~~~G~~a~~~~ 93 (154)
++.+ |+.|+.-..+++++|.+++ | +.+.|.. ......|...++ +.|+.+....
T Consensus 3 ~lD~rGl~CP~Pvl~~kkal~~l~~~G----------~~L~V~~dd~~a~~dI~~~~~-~~G~~v~~~~ 60 (87)
T 3hz7_A 3 TIDALGQVCPIPVIRAKKALAELGEAG----------GVVTVLVDNDISRQNLQKMAE-GMGYQSEYLE 60 (87)
T ss_dssp EEECTTCCTTHHHHHHHHHHHTTGGGC----------CEEEEEESSHHHHHHHHHHHH-HHTCEEEEEE
T ss_pred EEEcCCCCCCHHHHHHHHHHHhccCCC----------CEEEEEECCccHHHHHHHHHH-HCCCEEEEEE
Confidence 4788 9999999999999999983 4 2233332 235678888888 9999876543
No 51
>3lno_A Putative uncharacterized protein; alpha-beta fold, structural genomics, center for structural genomics of infectious diseases, csgid; 2.10A {Bacillus anthracis} SCOP: d.52.8.0
Probab=77.07 E-value=2 Score=28.29 Aligned_cols=36 Identities=17% Similarity=0.373 Sum_probs=26.3
Q ss_pred EEEEEEcCCCHhH------HHHHHHHH-hCCCCceEEEEeCCC
Q 031705 28 TVEVKVRIDCEGC------ERKVKRAV-EGMKGVKQVDVERKA 63 (154)
Q Consensus 28 ~~~l~Vgm~C~~C------~~kI~kal-~~~~GV~~v~vd~~~ 63 (154)
.+.+.+-++.++| ...|+.+| .+++||.+|+|++.-
T Consensus 45 ~V~V~ltlt~p~cp~~~~i~~~i~~al~~~l~Gv~~V~V~l~~ 87 (108)
T 3lno_A 45 NAVITMTMTSIGCPMAGQIVSDVKKVLSTNVPEVNEIEVNVVW 87 (108)
T ss_dssp CEEEEECCSCTTCTTHHHHHHHHHHHHHHHCTTCCCEEEEECC
T ss_pred eEEEEEEECCCCCcHHHHHHHHHHHHHHHhCCCCceEEEEEEe
Confidence 3555666666666 56788999 899999988876543
No 52
>1je3_A EC005, hypothetical 8.6 kDa protein in AMYA-FLIE intergenic region; mixed alpha-beta structure, structural genomics; NMR {Escherichia coli} SCOP: d.68.3.3
Probab=74.03 E-value=4.1 Score=26.45 Aligned_cols=55 Identities=9% Similarity=-0.014 Sum_probs=39.4
Q ss_pred EEEEEE-cCCCHhHHHHHHHHHhCCCC--ceEEEEeCCCcEEEEEecCCHHHHHHHHHHhhCCceEec
Q 031705 28 TVEVKV-RIDCEGCERKVKRAVEGMKG--VKQVDVERKANKVTVVGYVEPSKVVSRIAHRTGKKAEIW 92 (154)
Q Consensus 28 ~~~l~V-gm~C~~C~~kI~kal~~~~G--V~~v~vd~~~~~v~V~g~~~~~~v~~~i~~~~G~~a~~~ 92 (154)
..++.+ |+.|+.-.-+++++|.+++. +..|.+|. ......|.+.++ +.|+.+...
T Consensus 27 ~~~LD~rGl~CP~PvlktkkaL~~l~~Ge~L~Vl~dd---------~~a~~dIp~~~~-~~G~~v~~~ 84 (97)
T 1je3_A 27 DYRLDMVGEPCPYPAVATLEAMPQLKKGEILEVVSDC---------PQSINNIPLDAR-NHGYTVLDI 84 (97)
T ss_dssp EEEECSBCCSSSSSTHHHHHHTTTCCSSCEEEEEEBC---------SSSSCHHHHHHH-HHTCSEEEE
T ss_pred CeEEeCCCCCCCHHHHHHHHHHHcCCCCCEEEEEECC---------cchHHHHHHHHH-HCCCEEEEE
Confidence 456888 99999999999999998843 22222222 234567888888 999987654
No 53
>4gwb_A Peptide methionine sulfoxide reductase MSRA 3; structural genomics, protein structure initiative, nysgrc, R PSI-biology; 1.20A {Sinorhizobium meliloti}
Probab=59.83 E-value=29 Score=24.82 Aligned_cols=45 Identities=11% Similarity=0.249 Sum_probs=34.4
Q ss_pred HhHHHHHHHHHhCCCCceEEEEeCCCc---------------EEEEEe---cCCHHHHHHHHH
Q 031705 38 EGCERKVKRAVEGMKGVKQVDVERKAN---------------KVTVVG---YVEPSKVVSRIA 82 (154)
Q Consensus 38 ~~C~~kI~kal~~~~GV~~v~vd~~~~---------------~v~V~g---~~~~~~v~~~i~ 82 (154)
.||-.-++..+.+++||.++.+-...+ .|.|+- .++.++|++..=
T Consensus 9 gGCFWg~E~~f~~l~GV~~t~~GYagG~~~nPtY~~v~~HaE~V~V~yDp~~isy~~LL~~F~ 71 (168)
T 4gwb_A 9 GGCFWGMQDLIRKLPGVIETRVGYTGGDVPNATYRNHGTHAEGIEIIFDPERISYRRILELFF 71 (168)
T ss_dssp ESCHHHHHHHHTTSTTEEEEEEEEESSSCTTCBTTBCTTCEEEEEEEECTTTCCHHHHHHHHH
T ss_pred ccCccchHHHHhcCCCeEEEEEEcCCCcCCCCcccccCceEEEEEEEECCCCCCHHHHHHHHH
Confidence 577888899999999999999887654 455552 378888887664
No 54
>1fvg_A Peptide methionine sulfoxide reductase; oxidoreductase; 1.60A {Bos taurus} SCOP: d.58.28.1 PDB: 1fva_A 2l90_A*
Probab=59.20 E-value=27 Score=25.73 Aligned_cols=53 Identities=21% Similarity=0.142 Sum_probs=37.0
Q ss_pred CceEEEEEEcCCCHhHHHHHHHHHhCCCCceEEEEeCCCcE-------------------EEEEe---cCCHHHHHHHHH
Q 031705 25 QLQTVEVKVRIDCEGCERKVKRAVEGMKGVKQVDVERKANK-------------------VTVVG---YVEPSKVVSRIA 82 (154)
Q Consensus 25 ~~~~~~l~Vgm~C~~C~~kI~kal~~~~GV~~v~vd~~~~~-------------------v~V~g---~~~~~~v~~~i~ 82 (154)
.++++.|. .+|-.-++..+.+++||.++.+-...+. |.|.- .++.++|++..=
T Consensus 42 ~~~~a~fa-----gGCFWg~E~~F~~l~GV~~t~vGYagG~~~nPtY~~Vcsg~TGHaEaV~V~yDp~~isy~~LL~~F~ 116 (199)
T 1fvg_A 42 GTQMAVFG-----MGCFWGAERKFWTLKGVYSTQVGFAGGYTPNPTYKEVCSGKTGHAEVVRVVFQPEHISFEELLKVFW 116 (199)
T ss_dssp TCEEEEEE-----ESSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHHH
T ss_pred CceEEEEe-----cCCeeeeHHHHhhCCCeEEEEeeccCCCCCCCChhheecCCCCCeEEEEEEECCCcCCHHHHHHHHH
Confidence 35555554 6777778888999999999998766553 44442 267777777664
No 55
>1pav_A Hypothetical protein TA1170/TA1414; structural genomics, structure, fast NMR, semiautomated analysis; NMR {Thermoplasma acidophilum} SCOP: d.68.3.3
Probab=57.57 E-value=7.4 Score=23.73 Aligned_cols=52 Identities=13% Similarity=0.105 Sum_probs=37.2
Q ss_pred EEEE-cCCCHhHHHHHHHHHhCCCCceEEEEeCCCcEEEEEe--cCCHHHHHHHHHHhhCCceEe
Q 031705 30 EVKV-RIDCEGCERKVKRAVEGMKGVKQVDVERKANKVTVVG--YVEPSKVVSRIAHRTGKKAEI 91 (154)
Q Consensus 30 ~l~V-gm~C~~C~~kI~kal~~~~GV~~v~vd~~~~~v~V~g--~~~~~~v~~~i~~~~G~~a~~ 91 (154)
++.+ |+.|+.=.-+++++|.+++.-+. +.|.. ......|.+.++ +.|+.+..
T Consensus 8 ~lD~rGl~CP~Pvl~~k~al~~l~~G~~---------L~V~~dd~~a~~di~~~~~-~~G~~~~~ 62 (78)
T 1pav_A 8 VIDARGSYCPGPLMELIKAYKQAKVGEV---------ISVYSTDAGTKKDAPAWIQ-KSGQELVG 62 (78)
T ss_dssp CCCBSSCSSCTTHHHHHHHHTTSCTTCC---------EECCBSSSCHHHHHHHHHH-HHTEEECC
T ss_pred EEECCCCCCCHHHHHHHHHHHcCCCCCE---------EEEEECCccHHHHHHHHHH-HCCCEEEE
Confidence 4778 99999999999999998843222 23321 134678888888 99987644
No 56
>3bqh_A PILB, peptide methionine sulfoxide reductase MSRA/MSRB; methionine sulfoxide reductase A, oxidized form, elect transport; 1.95A {Neisseria meningitidis} PDB: 3bqe_A 3bqf_A* 3bqg_A
Probab=55.13 E-value=31 Score=25.22 Aligned_cols=45 Identities=13% Similarity=0.161 Sum_probs=33.3
Q ss_pred HhHHHHHHHHHhCCCCceEEEEeCCCcE-------------------EEEEe---cCCHHHHHHHHH
Q 031705 38 EGCERKVKRAVEGMKGVKQVDVERKANK-------------------VTVVG---YVEPSKVVSRIA 82 (154)
Q Consensus 38 ~~C~~kI~kal~~~~GV~~v~vd~~~~~-------------------v~V~g---~~~~~~v~~~i~ 82 (154)
.+|-.-++..+.+++||.++.+-...+. |.|.- .++.++|++..-
T Consensus 9 gGCFWg~E~~F~~~~GV~~t~vGYagG~~~nPtY~~Vc~g~tGHaEaV~V~yDp~~isy~~LL~~f~ 75 (193)
T 3bqh_A 9 GGCFWGLEAYFQRIDGVVDAVSGYANGNTKNPSYEDVSYRHTGHAETVKVTYDADKLSLDDILQYFF 75 (193)
T ss_dssp ESCHHHHHHHHHTSTTEEEEEEEEESCSSSSCCHHHHHHSCCCCEEEEEEEEETTTCCHHHHHHHHH
T ss_pred cCCeeehHHHHhcCCCEEEEEEeccCCcCCCCChheeecCCCCCeEEEEEEECCCcCCHHHHHHHHH
Confidence 5777778888999999999998765543 44542 367888887664
No 57
>2j89_A Methionine sulfoxide reductase A; MSRA, poplar, oxidoreductase; 1.7A {Populus trichocarpa}
Probab=50.77 E-value=41 Score=25.76 Aligned_cols=53 Identities=19% Similarity=0.179 Sum_probs=37.0
Q ss_pred CceEEEEEEcCCCHhHHHHHHHHHhCCCCceEEEEeCCCcE-------------------EEEEe---cCCHHHHHHHHH
Q 031705 25 QLQTVEVKVRIDCEGCERKVKRAVEGMKGVKQVDVERKANK-------------------VTVVG---YVEPSKVVSRIA 82 (154)
Q Consensus 25 ~~~~~~l~Vgm~C~~C~~kI~kal~~~~GV~~v~vd~~~~~-------------------v~V~g---~~~~~~v~~~i~ 82 (154)
.++++.|. .||-+-+|..+.+++||.++.+-...+. |.|.- .++.++|++..=
T Consensus 93 ~~e~a~fA-----gGCFWgvE~~F~~l~GV~~t~vGYaGG~t~nPTYeeVcsG~TGHaEaV~V~YDP~~ISy~~LL~~Fw 167 (261)
T 2j89_A 93 GQQFAQFG-----AGCFWGVELAFQRVPGVTKTEVGYTQGLLHNPTYEDVCTGTTNHNEVVRVQYDPKECSFDTLIDVLW 167 (261)
T ss_dssp TCEEEEEE-----ESSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHTTCSCCEEEEEEEECTTTSCHHHHHHHHH
T ss_pred CCeEEEEe-----cCCeeeeHHHHhhCCCeEEEEeeecCCCCCCCChhhcccCCCCCeEEEEEEECCCcCCHHHHHHHHH
Confidence 35555554 6777888888999999999998765543 44542 267777777654
No 58
>3e0m_A Peptide methionine sulfoxide reductase MSRA/MSRB 1; fusion, msrab, linker, hinge, cell membrane, membrane, multifunctional enzyme, oxidoreductase; 2.40A {Streptococcus pneumoniae}
Probab=50.28 E-value=35 Score=26.84 Aligned_cols=45 Identities=18% Similarity=0.220 Sum_probs=34.4
Q ss_pred HhHHHHHHHHHhCCCCceEEEEeCCCcE-----------------EEEEe---cCCHHHHHHHHH
Q 031705 38 EGCERKVKRAVEGMKGVKQVDVERKANK-----------------VTVVG---YVEPSKVVSRIA 82 (154)
Q Consensus 38 ~~C~~kI~kal~~~~GV~~v~vd~~~~~-----------------v~V~g---~~~~~~v~~~i~ 82 (154)
.+|-.-++..+.+++||.++.+-...+. |.|+- .++.++|++..=
T Consensus 9 gGCFWg~E~~F~~l~GV~~t~~GYagG~~~nPtY~~Vc~TGHaEaV~V~yDp~~isy~~LL~~f~ 73 (313)
T 3e0m_A 9 GGCFWGLEEYFSRISGVLETSVGYANGQVETTNYQLLKETDHAETVQVIYDEKEVSLREILLYYF 73 (313)
T ss_dssp CSCHHHHHHHHTTSTTEEEEEEEEESCSSSCCCTTTHHHHTCEEEEEEEECTTTSCHHHHHHHHH
T ss_pred cCCchhhHHHHhhCCCeEEeecccCCCCCCCCChhhhccCCCeEEEEEEECCCcCCHHHHHHHHH
Confidence 6778888899999999999998776543 55553 378888887664
No 59
>1ff3_A Peptide methionine sulfoxide reductase; alpha beta roll, PMSR, MSRA, oxidoreductase; 1.90A {Escherichia coli} SCOP: d.58.28.1 PDB: 2gt3_A 2iem_A
Probab=50.11 E-value=46 Score=24.66 Aligned_cols=53 Identities=13% Similarity=0.093 Sum_probs=36.5
Q ss_pred CceEEEEEEcCCCHhHHHHHHHHHhCCCCceEEEEeCCCc-------------------EEEEEe---cCCHHHHHHHHH
Q 031705 25 QLQTVEVKVRIDCEGCERKVKRAVEGMKGVKQVDVERKAN-------------------KVTVVG---YVEPSKVVSRIA 82 (154)
Q Consensus 25 ~~~~~~l~Vgm~C~~C~~kI~kal~~~~GV~~v~vd~~~~-------------------~v~V~g---~~~~~~v~~~i~ 82 (154)
.++++.|. .+|-.-+|..+.+++||.++.+-...+ .|.|.- .++.++|++..=
T Consensus 41 ~~~~a~fa-----gGCFWg~E~~F~~l~GV~~t~vGYaGG~~~nPtY~~VcsG~TGHaEaV~V~yDp~~isy~~LL~~F~ 115 (211)
T 1ff3_A 41 GMEIAIFA-----MGXFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLLQVFW 115 (211)
T ss_dssp TCEEEEEE-----CSSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHHH
T ss_pred CceEEEEe-----cCCeEEehhhHhcCCCeEEEEeeecCCCCCCCChhhccCCCCCceEEEEEEECCCcCCHHHHHHHHH
Confidence 34555554 567777788899999999999876643 244542 367777777664
No 60
>2w7v_A General secretion pathway protein L; transport, type II secretion, transport protein; 2.30A {Vibrio parahaemolyticus}
Probab=42.04 E-value=61 Score=20.78 Aligned_cols=50 Identities=8% Similarity=0.121 Sum_probs=35.8
Q ss_pred HHHHHHhCCCCce--EEEEeCCCcEEEEEe----cCCHHHHHHHHHHhhCCceEeccc
Q 031705 43 KVKRAVEGMKGVK--QVDVERKANKVTVVG----YVEPSKVVSRIAHRTGKKAEIWPY 94 (154)
Q Consensus 43 kI~kal~~~~GV~--~v~vd~~~~~v~V~g----~~~~~~v~~~i~~~~G~~a~~~~~ 94 (154)
.+..+|...++|. ++..|...+.+.+.. ....+.+...+. + ||.++.-+.
T Consensus 16 ~L~~~l~~vp~l~~~sLryD~~R~ELrlq~~A~dF~~~E~lr~~l~-~-gf~Ve~Gs~ 71 (95)
T 2w7v_A 16 ALPATLGQVKDLEITSFKYDGQRGEVRIHARSSDFQPFEQARVKLA-E-KFNVEQGQL 71 (95)
T ss_dssp GHHHHHHTSTTCEEEEEEEETTTTEEEEEEEESSSHHHHHHHHHHH-T-TEEEEECCC
T ss_pred HHHHHhccCCCceEEEEeecCCCCeEEEEEecCCHHHHHHHHHHhh-c-CcEEehhhh
Confidence 4566788888876 666777888888862 235677888887 6 998887654
No 61
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=38.93 E-value=60 Score=19.17 Aligned_cols=21 Identities=14% Similarity=0.177 Sum_probs=11.7
Q ss_pred HhHHHHHHHHHhCCCCceEEE
Q 031705 38 EGCERKVKRAVEGMKGVKQVD 58 (154)
Q Consensus 38 ~~C~~kI~kal~~~~GV~~v~ 58 (154)
..-...+.+.|.+++||.++.
T Consensus 56 ~~~l~~l~~~L~~~~~V~~v~ 76 (88)
T 2ko1_A 56 TDKLTTLMDKLRKVQGVFTVE 76 (88)
T ss_dssp HHHHHHHHHHHTTCTTEEEEE
T ss_pred HHHHHHHHHHHhcCCCceEEE
Confidence 334445566666666665553
No 62
>1kaf_A Transcription regulatory protein MOTA; escherichia coli, X-RAY crystallography, protein-DNA interactions, structural genomics; 1.60A {Enterobacteria phage T4} SCOP: d.199.1.1
Probab=37.39 E-value=56 Score=21.58 Aligned_cols=41 Identities=12% Similarity=0.375 Sum_probs=33.1
Q ss_pred CCCCceEEEEeCCCcEEEEEecCCHHHHHHHHHHhhCCceEec
Q 031705 50 GMKGVKQVDVERKANKVTVVGYVEPSKVVSRIAHRTGKKAEIW 92 (154)
Q Consensus 50 ~~~GV~~v~vd~~~~~v~V~g~~~~~~v~~~i~~~~G~~a~~~ 92 (154)
+..|+...++ ...+.++|.|+--.+++++.++ ++|..+..-
T Consensus 42 Rt~GiRqfEi-~n~G~fRI~gYk~se~~~~~f~-slGm~~K~~ 82 (108)
T 1kaf_A 42 RTNGIRNFEI-NNNGNMRIFGYKMMEHHIQKFT-DIGMSCKIA 82 (108)
T ss_dssp EETTEEEEEE-CTTSEEEEEEESCCHHHHHHHH-TTTCEEEEC
T ss_pred ccCceeEEEE-ecCCcEEEEEecCCHHHHHHHH-hcCceEEEc
Confidence 4578888888 6677899999877888999999 999766543
No 63
>2k1h_A Uncharacterized protein Ser13; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Staphylococcus epidermidis}
Probab=35.52 E-value=75 Score=20.29 Aligned_cols=38 Identities=11% Similarity=0.155 Sum_probs=27.9
Q ss_pred HHHHHHhCCCCceEEEEeCCCcEEEEE--ecCCHHHHHHHHH
Q 031705 43 KVKRAVEGMKGVKQVDVERKANKVTVV--GYVEPSKVVSRIA 82 (154)
Q Consensus 43 kI~kal~~~~GV~~v~vd~~~~~v~V~--g~~~~~~v~~~i~ 82 (154)
-+-++|-.++||.+|-+. ..=|+|+ ..++.+.|...|.
T Consensus 40 PLA~~LF~i~gVk~Vf~g--~dFITVtK~~~~dW~~ikp~I~ 79 (94)
T 2k1h_A 40 EFINRLFEIEGVKSIFYV--LDFISIDKEDNANWNELLPQIE 79 (94)
T ss_dssp HHHHHHHTSTTEEEEEEE--TTEEEEEECTTCCHHHHHHHHH
T ss_pred HHHHHhhCCCCeeEEEEe--CCEEEEecCCCCCHHHHHHHHH
Confidence 455566689999988754 5667787 3478888887776
No 64
>1nwa_A Peptide methionine sulfoxide reductase MSRA; oxidoreductase, product complex, structural genomics, PSI, protein structure initiative; 1.50A {Mycobacterium tuberculosis} SCOP: d.58.28.1
Probab=32.85 E-value=43 Score=24.69 Aligned_cols=52 Identities=13% Similarity=0.162 Sum_probs=36.1
Q ss_pred ceEEEEEEcCCCHhHHHHHHHHHhCCCCceEEEEeCCCc---------------EEEEEe---cCCHHHHHHHHH
Q 031705 26 LQTVEVKVRIDCEGCERKVKRAVEGMKGVKQVDVERKAN---------------KVTVVG---YVEPSKVVSRIA 82 (154)
Q Consensus 26 ~~~~~l~Vgm~C~~C~~kI~kal~~~~GV~~v~vd~~~~---------------~v~V~g---~~~~~~v~~~i~ 82 (154)
++++.|. .+|-.-++..+.+++||.++.+-...+ .|.|.- .++.++|++..-
T Consensus 25 ~~~a~fa-----gGCFWg~E~~F~~l~GV~~t~vGYaGG~~~nPtYe~~G~HaEaV~V~yDp~~iSy~~LL~~Ff 94 (203)
T 1nwa_A 25 NQKAILA-----GGCFWGLQDLIRNQPGVVSTRVGYSGGNIPNATYRNHGTHAEAVEIIFDPTVTDYRTLLEFFF 94 (203)
T ss_dssp CEEEEEE-----ESCHHHHHHHHTTSTTEEEEEEEEESSSCSSCCSSCCTTCEEEEEEEECTTTCCHHHHHHHHH
T ss_pred cceEEEe-----cCCeeeeHHHHhcCCCeEEEEeeecCCCCCCCChhhcCCceEEEEEEECCCcCCHHHHHHHHH
Confidence 3455554 677777888899999999999876554 344542 367777777653
No 65
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=31.87 E-value=79 Score=22.21 Aligned_cols=58 Identities=12% Similarity=0.182 Sum_probs=39.1
Q ss_pred ccccchhhcccC-CCCCcchh----hcCCceEEEEEEcCCCHhHHHHHHHHHhCCCCceEEEEe
Q 031705 2 GVVDHFSDYFDC-SHGSSKLK----KRRQLQTVEVKVRIDCEGCERKVKRAVEGMKGVKQVDVE 60 (154)
Q Consensus 2 ~~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~l~Vgm~C~~C~~kI~kal~~~~GV~~v~vd 60 (154)
|+|..++.+++. +..+.... ......+++|.|. ....-...|.+.|.++.+|.+|.--
T Consensus 15 GvLarIt~lfs~rg~NI~Sl~v~~t~d~~~sriti~V~-~d~~~leqI~kqL~Kl~dV~~V~r~ 77 (164)
T 2f1f_A 15 GALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTV-GDEKVLEQIEKQLHKLVDVLRVSEL 77 (164)
T ss_dssp THHHHHHHHHHTTTCCCSEEEEEECSCSSEEEEEEEEE-SCHHHHHHHHHHHHHSTTEEEEEEG
T ss_pred cHHHHHHHHHHHCCCCeeeceeeecCCCCEEEEEEEEe-ccHHHHHHHHHHHcCCCCEEEEEEc
Confidence 677777777653 33333221 2235667777775 4577888999999999999888643
No 66
>1owx_A Lupus LA protein, SS-B, LA; RRM, transcription; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=31.28 E-value=1.2e+02 Score=20.20 Aligned_cols=56 Identities=11% Similarity=0.105 Sum_probs=42.4
Q ss_pred EEEEE-cCCCH-hHHHHHHHHHhCCCCceEEEEeCCCcEEEEEecCCHHHHHHHHHHhh
Q 031705 29 VEVKV-RIDCE-GCERKVKRAVEGMKGVKQVDVERKANKVTVVGYVEPSKVVSRIAHRT 85 (154)
Q Consensus 29 ~~l~V-gm~C~-~C~~kI~kal~~~~GV~~v~vd~~~~~v~V~g~~~~~~v~~~i~~~~ 85 (154)
+.+.| ++... .+...|+..++....|..|.+.....+..|.-...+++..++++ ++
T Consensus 19 ~il~v~~l~~~~~sredLke~F~~~G~V~~Vd~~~g~~tgfVrf~~~~~~A~~av~-~l 76 (121)
T 1owx_A 19 CLLKFSGDLDDQTCREDLHILFSNHGEIKWIDFVRGAKEGIILFKEKAKEALGKAK-DA 76 (121)
T ss_dssp CEEEEEESCCSSCCHHHHHHHTCSSCCEEEEECCTTCSEEEEEESSCHHHHHHHHH-HT
T ss_pred eEEEEecCCCCcCCHHHHHHHHHhcCCEEEEEEecCCCEEEEEECCChHHHHHHHH-Hh
Confidence 46788 78777 77999999999998899888877777777765422566677776 54
No 67
>2cpq_A FragIle X mental retardation syndrome related protein 1, isoform B'; KH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.51.1.1
Probab=29.27 E-value=1.1e+02 Score=19.34 Aligned_cols=41 Identities=10% Similarity=0.165 Sum_probs=28.9
Q ss_pred HHHHHhCCCCceEEEEeCCCcEEEEEecCCHHHHHHHHHHhhC
Q 031705 44 VKRAVEGMKGVKQVDVERKANKVTVVGYVEPSKVVSRIAHRTG 86 (154)
Q Consensus 44 I~kal~~~~GV~~v~vd~~~~~v~V~g~~~~~~v~~~i~~~~G 86 (154)
.-+.+....|+.+++++-..++|+|.+. +.+.+.++.. ..-
T Consensus 36 ~Ik~I~e~tGv~~IdI~eddG~V~I~g~-~~ea~~~A~~-~I~ 76 (91)
T 2cpq_A 36 NIQQARKVPGVTAIELDEDTGTFRIYGE-SADAVKKARG-FLE 76 (91)
T ss_dssp HHHHHHTSTTEEEEEEETTTTEEEEEES-SHHHHHHHHH-HHS
T ss_pred HHHHHHHHhCCeEEEEEcCCCEEEEEEC-CHHHHHHHHH-HHH
Confidence 3455566689877888876799999884 6777766665 444
No 68
>2nyt_A Probable C->U-editing enzyme apobec-2; cytidine deaminase, zinc-ION binding, hydrolase; 2.50A {Homo sapiens} PDB: 2rpz_A
Probab=27.58 E-value=63 Score=23.35 Aligned_cols=60 Identities=15% Similarity=0.288 Sum_probs=41.0
Q ss_pred EEEEEE-cCCCHhHHHHHHHHHhCCCCceEEEEeCCCcEEEEEecCC--HHHHHHHHHHhhCCceEecc
Q 031705 28 TVEVKV-RIDCEGCERKVKRAVEGMKGVKQVDVERKANKVTVVGYVE--PSKVVSRIAHRTGKKAEIWP 93 (154)
Q Consensus 28 ~~~l~V-gm~C~~C~~kI~kal~~~~GV~~v~vd~~~~~v~V~g~~~--~~~v~~~i~~~~G~~a~~~~ 93 (154)
..++-| ---|..|+..|-.+|.+.+||..|-+-... -..-+ ..+-++.++ +.|-.++...
T Consensus 84 g~TlYvTlePC~~Ca~aIi~al~~~~gI~rVV~~~~d-----~~~~~p~~~~g~~~L~-~aGI~V~~~~ 146 (190)
T 2nyt_A 84 NVTWYVSSSPCAACADRIIKTLSKTKNLRLLILVGRL-----FMWEEPEIQAALKKLK-EAGCKLRIMK 146 (190)
T ss_pred CeEEEEEcChHHHHHHHHHHhhhhcCCccEEEEEeec-----CCcCChHHHHHHHHHH-HCCCEEEEec
Confidence 566777 566999999999999999999876542110 00001 235677888 8998877654
No 69
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=27.52 E-value=68 Score=19.45 Aligned_cols=34 Identities=18% Similarity=0.152 Sum_probs=22.0
Q ss_pred EEEEEEcCCCHhHH-----HHHHHHHhCCCCceEEEEeCC
Q 031705 28 TVEVKVRIDCEGCE-----RKVKRAVEGMKGVKQVDVERK 62 (154)
Q Consensus 28 ~~~l~Vgm~C~~C~-----~kI~kal~~~~GV~~v~vd~~ 62 (154)
++++-..-.|+.|. .++++.|... ||.-..+|..
T Consensus 3 ~v~ly~~~~C~~c~~~~~~~~ak~~L~~~-~i~~~~~di~ 41 (93)
T 1t1v_A 3 GLRVYSTSVTGSREIKSQQSEVTRILDGK-RIQYQLVDIS 41 (93)
T ss_dssp CEEEEECSSCSCHHHHHHHHHHHHHHHHT-TCCCEEEETT
T ss_pred CEEEEEcCCCCCchhhHHHHHHHHHHHHC-CCceEEEECC
Confidence 34444456799997 7888888764 6654445443
No 70
>1wg1_A KIAA1579 protein, homolog EXC-7; RBD, structural genomics, riken structural genomics/proteomics initiative, RSGI, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 1wi6_A
Probab=24.44 E-value=1.2e+02 Score=17.96 Aligned_cols=51 Identities=14% Similarity=0.163 Sum_probs=38.0
Q ss_pred EEEE-cCCCHhHHHHHHHHHhCCCCceEEEEeCCCcEEEEEecCCHHHHHHHHH
Q 031705 30 EVKV-RIDCEGCERKVKRAVEGMKGVKQVDVERKANKVTVVGYVEPSKVVSRIA 82 (154)
Q Consensus 30 ~l~V-gm~C~~C~~kI~kal~~~~GV~~v~vd~~~~~v~V~g~~~~~~v~~~i~ 82 (154)
++-| ++.-.--...++..+.+. +|.++.++...+-..|+- .+.++..++|+
T Consensus 7 ~l~V~nLp~~~t~~~l~~~F~~~-~v~~~~i~~~~g~afV~f-~~~~~a~~Ai~ 58 (88)
T 1wg1_A 7 GILVKNLPQDSNCQEVHDLLKDY-DLKYCYVDRNKRTAFVTL-LNGEQAQNAIQ 58 (88)
T ss_dssp CEEEESCCSSCCHHHHHHHTCSS-CCCCEEEEGGGTEEEECC-SCHHHHHHHHH
T ss_pred EEEEeCCCCCCCHHHHHHHHhhC-CeEEEEEeCCCcEEEEEE-CCHHHHHHHHH
Confidence 3667 777667788999999999 999999885556555653 36677777776
No 71
>1xhj_A Nitrogen fixation protein NIFU; alpha-beta, NIFU-like, structural genomics, protein structur initiative, NESG, PSI; NMR {Staphylococcus epidermidis} SCOP: d.52.8.1
Probab=23.98 E-value=93 Score=19.58 Aligned_cols=32 Identities=25% Similarity=0.558 Sum_probs=20.1
Q ss_pred EEEEEEcCCCHhH-------HHHHHHHHh-CCCCceEEEE
Q 031705 28 TVEVKVRIDCEGC-------ERKVKRAVE-GMKGVKQVDV 59 (154)
Q Consensus 28 ~~~l~Vgm~C~~C-------~~kI~kal~-~~~GV~~v~v 59 (154)
.+.+++.=.|.+| ..-|++.|. .++.|..|..
T Consensus 39 ~V~V~L~GaC~gCpss~~TLk~gIE~~L~~~vPev~~V~~ 78 (88)
T 1xhj_A 39 IVKLQLHGACGTCPSSTITLKAGIERALHEEVPGVIEVEQ 78 (88)
T ss_dssp EEEEEEESSCCSSCHHHHHHHHHHHHHHHHHSTTCCEEEE
T ss_pred EEEEEEeecCCCCcchHHHHHHHHHHHHHHhCCCceEEEe
Confidence 5667775567777 234566665 5688776653
No 72
>2j58_A WZA, outer membrane lipoprotein WZA; membrane protein; 2.26A {Escherichia coli} PDB: 2w8i_A 2w8h_A*
Probab=23.76 E-value=1.3e+02 Score=23.77 Aligned_cols=55 Identities=24% Similarity=0.358 Sum_probs=40.8
Q ss_pred EEEE-cCCCHhHHHHHHHHHhCC---CCceEEEE-eCCCcEEEEEecC---------C-HHHHHHHHHHhhC
Q 031705 30 EVKV-RIDCEGCERKVKRAVEGM---KGVKQVDV-ERKANKVTVVGYV---------E-PSKVVSRIAHRTG 86 (154)
Q Consensus 30 ~l~V-gm~C~~C~~kI~kal~~~---~GV~~v~v-d~~~~~v~V~g~~---------~-~~~v~~~i~~~~G 86 (154)
.++| |++-.--...|++.|.+. +-| .|.+ +....+|.|.|.+ . ...|+++|. .+|
T Consensus 113 ~v~vaG~T~~e~~~~I~~~L~~~~~~P~V-~V~v~~~~~~~V~V~GeV~~PG~y~l~~~~~tl~~ai~-~AG 182 (359)
T 2j58_A 113 KVQVAGKTVSQVRQDITSRLTTYIESPQV-DVSIAAFRSQKVYVTGEVANSGKQAITNIPLTVMDAIN-AAG 182 (359)
T ss_dssp EEECTTCCHHHHHHHHHHHHTTTSSSCCE-EEEEEECCSCEEEEEESBSSCEEEECCSSCCBHHHHHH-HTT
T ss_pred eEEECCCCHHHHHHHHHHHHHHhccCCeE-EEEEccCCceEEEEEceecCCeEEEeCCCCCcHHHHHH-HcC
Confidence 5889 999999999999999865 223 3333 4566789998642 2 468999998 776
No 73
>2yy3_A Elongation factor 1-beta; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 2.50A {Pyrococcus horikoshii}
Probab=23.06 E-value=1.3e+02 Score=18.99 Aligned_cols=35 Identities=26% Similarity=0.271 Sum_probs=24.3
Q ss_pred ceEEEEEEcCCCH-h-HHHHHHHHHhCCCCceEEEEe
Q 031705 26 LQTVEVKVRIDCE-G-CERKVKRAVEGMKGVKQVDVE 60 (154)
Q Consensus 26 ~~~~~l~Vgm~C~-~-C~~kI~kal~~~~GV~~v~vd 60 (154)
++.+.+.+-+-.. + -...++.++++++||+++++-
T Consensus 50 lk~L~i~~vveD~~~~~tD~lee~i~~~e~VqSvdV~ 86 (91)
T 2yy3_A 50 LVALKFYVLGRDEEGYSFDEVAEKFEEVENVESAEVE 86 (91)
T ss_dssp CEEEEEEEEECSSTTCCHHHHHHHHHHSTTEEEEEEE
T ss_pred eeeEEEEEEEECCCccccHHHHHHHhcCCCceEEEEE
Confidence 3444444433333 4 588999999999999999874
No 74
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=22.75 E-value=1.5e+02 Score=19.28 Aligned_cols=53 Identities=15% Similarity=0.151 Sum_probs=33.3
Q ss_pred ceEEEEEEcCCCHhHHHHHHHHHhCCCCceEEEEeCCCcEEEEEecCCHHHHHHHHHHhhCC
Q 031705 26 LQTVEVKVRIDCEGCERKVKRAVEGMKGVKQVDVERKANKVTVVGYVEPSKVVSRIAHRTGK 87 (154)
Q Consensus 26 ~~~~~l~Vgm~C~~C~~kI~kal~~~~GV~~v~vd~~~~~v~V~g~~~~~~v~~~i~~~~G~ 87 (154)
|..+++--.-.|..|. ++++.|.. .||.-..+|.... ..+.+++.+.+. ++|.
T Consensus 4 M~~i~iY~~p~C~~c~-ka~~~L~~-~gi~~~~~di~~~------~~~~~eL~~~l~-~~g~ 56 (121)
T 3rdw_A 4 MKDVTIYHNPRCSKSR-ETLALVEQ-QGITPQVVLYLET------PPSVDKLKELLQ-QLGF 56 (121)
T ss_dssp --CCEEECCTTCHHHH-HHHHHHHT-TTCCCEEECTTTS------CCCHHHHHHHHH-HTTC
T ss_pred CCcEEEEECCCCHHHH-HHHHHHHH-cCCCcEEEeeccC------CCcHHHHHHHHH-hcCC
Confidence 4334443366799997 45555554 5776555555443 247889999998 8986
No 75
>1gh8_A Translation elongation factor 1BETA; alpha-beta sandwich, gene regulation, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus} SCOP: d.58.12.1
Probab=21.96 E-value=1.4e+02 Score=18.86 Aligned_cols=35 Identities=29% Similarity=0.578 Sum_probs=24.9
Q ss_pred ceEEEEEEcC-CCHhHHHHHHHHHhCCCCceEEEEe
Q 031705 26 LQTVEVKVRI-DCEGCERKVKRAVEGMKGVKQVDVE 60 (154)
Q Consensus 26 ~~~~~l~Vgm-~C~~C~~kI~kal~~~~GV~~v~vd 60 (154)
++.+.+.+-+ +-.+-...++.++++++||+++++-
T Consensus 48 lk~L~i~~vveD~~~~td~lee~i~~~e~Vqsvdv~ 83 (89)
T 1gh8_A 48 LVALNVMVVVGDAEGGTEAAEESLSGIEGVSNIEVT 83 (89)
T ss_dssp CEEEEEEEEESSSCGGGGHHHHHHTTSCSSEEEEEE
T ss_pred eeeEEEEEEEEcCCcChHHHHHHHhccCCccEEEEE
Confidence 3444444433 3456678999999999999999874
No 76
>2fi0_A Conserved domain protein; structural genomics,streptococcus pneumoniae, PSI, protein S initiative; 2.10A {Streptococcus pneumoniae} SCOP: a.248.1.1
Probab=21.34 E-value=66 Score=19.61 Aligned_cols=18 Identities=17% Similarity=0.237 Sum_probs=16.1
Q ss_pred CCHHHHHHHHHHhhCCceE
Q 031705 72 VEPSKVVSRIAHRTGKKAE 90 (154)
Q Consensus 72 ~~~~~v~~~i~~~~G~~a~ 90 (154)
++++++++.|+ +.||.+.
T Consensus 61 id~d~l~~~L~-~~g~~~~ 78 (81)
T 2fi0_A 61 TPMDKIVRTLE-ANGYEVI 78 (81)
T ss_dssp CCHHHHHHHHH-HTTCEEE
T ss_pred CCHHHHHHHHH-HcCCEee
Confidence 68999999999 9999764
No 77
>4g1a_A AQ-C16C19 peptide; helical bundles, metallopeptide complexes, polynuclear metal CD(II), SELF-assembly, metal binding protein; 1.85A {Synthetic construct}
Probab=21.01 E-value=28 Score=17.25 Aligned_cols=10 Identities=40% Similarity=1.165 Sum_probs=8.3
Q ss_pred CCHhHHHHHH
Q 031705 36 DCEGCERKVK 45 (154)
Q Consensus 36 ~C~~C~~kI~ 45 (154)
.|..|+.+|-
T Consensus 15 kcaaceqkia 24 (32)
T 4g1a_A 15 KCAACEQKIA 24 (32)
T ss_dssp HTSSHHHHHH
T ss_pred HHHHHHHHHH
Confidence 4999999885
No 78
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=20.48 E-value=1.9e+02 Score=20.29 Aligned_cols=57 Identities=9% Similarity=0.173 Sum_probs=37.9
Q ss_pred ccccchhhcccC-CCCCcchh----hcCCceEEEEEEcCCCHhHHHHHHHHHhCCCCceEEEE
Q 031705 2 GVVDHFSDYFDC-SHGSSKLK----KRRQLQTVEVKVRIDCEGCERKVKRAVEGMKGVKQVDV 59 (154)
Q Consensus 2 ~~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~l~Vgm~C~~C~~kI~kal~~~~GV~~v~v 59 (154)
|+|..++.++.. +..+.... ......+++|.|. ....-...|.+.|.++.+|..|.-
T Consensus 16 GvL~rI~~lfs~rg~NI~Sl~v~~t~d~g~sritivV~-~d~~~leql~kQL~Kl~dV~~V~~ 77 (165)
T 2pc6_A 16 GALSRVAGLFSARGYNIESLSVAPTEDPTLSRMTLVTN-GPDEIVEQITKQLNKLIEVVKLID 77 (165)
T ss_dssp THHHHHHHHHHHHTCCCCEEEEEECSSTTEEEEEEEEE-ECHHHHHHHHHHHHHSTTEEEEEE
T ss_pred cHHHHHHHHHHHCCCcEEEEEEEecCCCCEEEEEEEEe-ccHHHHHHHHHHhcCCCCEEEEEE
Confidence 677777776642 33332211 2234567777774 347788899999999999988864
Done!