Citrus Sinensis ID: 031706


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150----
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIERIKERVEEKEGIPPVQQRLIYAGKQLADDKTARDYNIEGGSVLHLVLALRGGNL
cEEEEEcccccEEEEEECccccHHHHHHHHHHHHcccccccEEEEccEEccccccccccccccccEEEEEEEEcccCEEEEECccccEEEEEccccccHHHHHHHHHHHHcccccccEEEcccEEccccccccccccccccEEEEEEEEccccc
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIERIKERVEEKEGIPPVQQRLIYAGKQLADDKTARDYNIEGGSVLHLVLALRGGN*
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MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIERIKERVEEKEGIPPVQQRLIYAGKQLADDKTARDYNIEGGSVLHLVLALRGGNL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Ubiquitin-NEDD8-like protein RUB1 NEDD8-like protein RUB1: Appears to function as a stable post-translational protein modifier. An AMP-RUB1 intermediate is formed by an activating enzyme, distinct from the ubiquitin activating enzyme E1, which is composed of an heterodimer AXR1/ECR1. Auxin response is mediated, at least in part, through modification of the cullin AtCUL1 by the attachment of RUB1 to 'Lys-692'.confidentQ9SHE7
Ubiquitin-NEDD8-like protein RUB2 NEDD8-like protein RUB2: Appears to function as a stable post-translational protein modifier.confidentP0C031
Ubiquitin-NEDD8-like protein RUB1 NEDD8-like protein RUB1: Appears to function as a stable post-translational protein modifier.confidentP0C030

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 3K9O, chain B
Confidence level:very confident
Coverage over the Query: 1-75
View the alignment between query and template
View the model in PyMOL
Template: 3DBH, chain I
Confidence level:very confident
Coverage over the Query: 74-152
View the alignment between query and template
View the model in PyMOL