BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>031708
MLIRQARNFSKAYAAPLSSSLKTLFPSPADVVPGVAADVADVTGADDLVYTEPPVSSTVK
PAMEPSLLQPGVVIYDGVCHLCHGGVKWVIRADKYRKIKFCCLQSQAAEPYLRLCGLDRE
DVLRRFLFVEGPGLYHQASTGGGWGITVNGKPGD

High Scoring Gene Products

Symbol, full name Information P value
PSPTO_4436
Uncharacterized protein
protein from Pseudomonas syringae pv. tomato str. DC3000 1.4e-07
PSPPH_0898
Uncharacterized protein
protein from Pseudomonas syringae pv. phaseolicola 1448A 1.8e-07
AT1G52590 protein from Arabidopsis thaliana 4.8e-07

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  031708
        (154 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

UNIPROTKB|Q87WV7 - symbol:PSPTO_4436 "Uncharacterized pro...   120  1.4e-07   1
UNIPROTKB|Q48N48 - symbol:PSPPH_0898 "Uncharacterized pro...   119  1.8e-07   1
TAIR|locus:2035159 - symbol:AT1G52590 "AT1G52590" species...   115  4.8e-07   1


>UNIPROTKB|Q87WV7 [details] [associations]
            symbol:PSPTO_4436 "Uncharacterized protein" species:223283
            "Pseudomonas syringae pv. tomato str. DC3000" [GO:0003674
            "molecular_function" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            EMBL:AE016853 GenomeReviews:AE016853_GR eggNOG:COG3011
            HOGENOM:HOG000029296 InterPro:IPR007263 Pfam:PF04134
            RefSeq:NP_794190.1 DNASU:1186117 GeneID:1186117 KEGG:pst:PSPTO_4436
            PATRIC:20000384 OMA:FIKSEAV ProtClustDB:CLSK2485111
            BioCyc:PSYR223283:GJIX-4502-MONOMER Uniprot:Q87WV7
        Length = 150

 Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
 Identities = 32/84 (38%), Positives = 47/84 (55%)

Query:    56 SSTVKPAMEPSLLQPG--VVIYDGVCHLCHGGVKWVIRADKYRKIKFCCLQSQAAEPYLR 113
             S+T +P   P  L+ G  VV++DGVC LC+G  K++IR D+ ++I+   +QS   +  L 
Sbjct:     3 SNTPQPNPAP-FLKAGETVVLFDGVCKLCNGWAKFIIRHDRRQRIRLATVQSPEGQALLE 61

Query:   114 LCGL--DREDVLRRFLFVEGPGLY 135
               GL  DR D +     V G  LY
Sbjct:    62 WAGLPLDRFDTMAA---VTGDRLY 82


>UNIPROTKB|Q48N48 [details] [associations]
            symbol:PSPPH_0898 "Uncharacterized protein" species:264730
            "Pseudomonas syringae pv. phaseolicola 1448A" [GO:0003674
            "molecular_function" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            EMBL:CP000058 GenomeReviews:CP000058_GR eggNOG:COG3011
            HOGENOM:HOG000029296 InterPro:IPR007263 Pfam:PF04134
            RefSeq:YP_273173.1 STRING:Q48N48 GeneID:3559217 KEGG:psp:PSPPH_0898
            PATRIC:19970877 OMA:DECHEAL ProtClustDB:CLSK749687 Uniprot:Q48N48
        Length = 122

 Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
 Identities = 24/64 (37%), Positives = 41/64 (64%)

Query:    61 PAMEPS-LLQPG--VVIYDGVCHLCHGGVKWVIRADKYRKIKFCCLQSQAAEPYLRLCGL 117
             P   P+  L+P   VV++DGVC LC+G VK++IR D +++++   +QS+  +  L+  GL
Sbjct:     2 PTTTPAPYLKPDECVVLFDGVCKLCNGVVKFLIRHDPHQRLRLAAVQSEQGQALLKWAGL 61

Query:   118 DRED 121
               +D
Sbjct:    62 PLDD 65


>TAIR|locus:2035159 [details] [associations]
            symbol:AT1G52590 "AT1G52590" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0010287 "plastoglobule"
            evidence=IDA] EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0010287
            EMBL:AC008016 EMBL:AK117491 EMBL:BT005075 EMBL:AY088239
            IPI:IPI00548613 PIR:F96566 RefSeq:NP_564611.1 UniGene:At.37569
            UniGene:At.37570 STRING:Q9SSR1 PaxDb:Q9SSR1 PRIDE:Q9SSR1
            DNASU:841691 EnsemblPlants:AT1G52590.1 GeneID:841691
            KEGG:ath:AT1G52590 TAIR:At1g52590 eggNOG:COG3011
            HOGENOM:HOG000029296 InParanoid:Q9SSR1 OMA:IAKNRYK PhylomeDB:Q9SSR1
            ProtClustDB:CLSN2688726 Genevestigator:Q9SSR1 InterPro:IPR007263
            Pfam:PF04134 Uniprot:Q9SSR1
        Length = 172

 Score = 115 (45.5 bits), Expect = 4.8e-07, P = 4.8e-07
 Identities = 22/51 (43%), Positives = 35/51 (68%)

Query:    72 VVIYDGVCHLCHGGVKWVIRADKYRKIKFCCLQSQAAEPYLRLCGLDREDV 122
             ++++DGVC+LC+GGVK+V   D+ R I+F  LQS+A +  L   G   +D+
Sbjct:    55 IMLFDGVCNLCNGGVKFVRDHDRNRSIRFEALQSEAGKKLLLRSGRAPDDI 105


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.140   0.447    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      154       134   0.00091  102 3  11 22  0.40    31
                                                     30  0.44    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  588 (63 KB)
  Total size of DFA:  138 KB (2085 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.18u 0.20s 12.38t   Elapsed:  00:00:01
  Total cpu time:  12.18u 0.20s 12.38t   Elapsed:  00:00:01
  Start:  Mon May 20 23:56:30 2013   End:  Mon May 20 23:56:31 2013

Back to top