Query 031715
Match_columns 154
No_of_seqs 116 out of 1143
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 06:27:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031715.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031715hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2q0v_A Ubiquitin-conjugating e 100.0 5.2E-44 1.8E-48 265.6 15.3 138 7-149 15-156 (156)
2 2a4d_A Ubiquitin-conjugating e 100.0 4.3E-44 1.5E-48 266.9 14.7 138 6-143 18-156 (160)
3 1jat_B Ubiquitin-conjugating e 100.0 7.8E-44 2.7E-48 259.8 11.7 131 12-146 5-138 (138)
4 2awf_A Ubiquitin-conjugating e 100.0 3.6E-43 1.2E-47 264.8 15.4 137 11-151 15-162 (172)
5 1zdn_A Ubiquitin-conjugating e 100.0 9E-44 3.1E-48 264.8 11.2 139 5-150 5-143 (158)
6 2e2c_A Ubiquitin conjugating e 100.0 4.2E-43 1.4E-47 260.6 13.3 133 13-152 9-141 (156)
7 2ucz_A UBC7, ubiquitin conjuga 100.0 3E-43 1E-47 263.5 12.5 134 13-150 4-148 (165)
8 2hlw_A Ubiquitin-conjugating e 100.0 3.3E-43 1.1E-47 264.6 12.2 136 8-143 30-166 (170)
9 1fxt_A Ubiquitin-conjugating e 100.0 1.5E-43 5.3E-48 261.1 10.0 132 14-150 2-133 (149)
10 3h8k_A Ubiquitin-conjugating e 100.0 9.3E-43 3.2E-47 260.6 13.7 133 14-150 4-147 (164)
11 2c2v_B Ubiquitin-conjugating e 100.0 9.3E-43 3.2E-47 258.3 12.6 129 15-150 7-135 (154)
12 3rcz_B SUMO-conjugating enzyme 100.0 1.1E-42 3.8E-47 260.1 13.1 135 14-150 11-147 (163)
13 2ayv_A Ubiquitin-conjugating e 100.0 1.4E-42 4.8E-47 260.2 13.4 132 12-150 20-151 (166)
14 4gpr_A Ubiquitin-conjugating e 100.0 1.4E-42 4.8E-47 256.6 13.0 130 14-150 5-134 (151)
15 1ayz_A UBC2, ubiquitin-conjuga 100.0 1.6E-42 5.6E-47 260.6 13.1 131 13-150 4-134 (169)
16 2r0j_A Ubiquitin carrier prote 100.0 2.1E-42 7.1E-47 255.1 13.2 129 15-150 3-131 (149)
17 3rz3_A Ubiquitin-conjugating e 100.0 2.3E-42 7.7E-47 262.8 13.6 131 14-148 8-149 (183)
18 3fn1_B NEDD8-conjugating enzym 100.0 1.3E-42 4.6E-47 260.4 12.0 141 5-150 6-151 (167)
19 1z2u_A Ubiquitin-conjugating e 100.0 2.2E-42 7.6E-47 255.2 12.7 130 14-150 5-134 (150)
20 2aak_A UBC1, ubiquitin conjuga 100.0 2.7E-42 9.3E-47 255.2 13.0 131 13-150 4-134 (152)
21 2c4o_A Ubiquitin-conjugating e 100.0 3.2E-42 1.1E-46 258.1 13.3 131 13-150 19-149 (165)
22 1i7k_A Ubiquitin-conjugating e 100.0 1.6E-42 5.3E-47 262.8 11.5 131 11-148 28-158 (179)
23 1jat_A Ubiquitin-conjugating e 100.0 5.6E-42 1.9E-46 254.3 14.0 129 15-150 7-135 (155)
24 2f4z_A Tgtwinscan_2721 - E2 do 100.0 2.6E-42 8.7E-47 264.3 12.4 133 12-150 31-176 (193)
25 1yh2_A HSPC150 protein similar 100.0 4.2E-42 1.4E-46 258.3 13.0 133 13-150 4-138 (169)
26 1yrv_A Ubiquitin-conjugating l 100.0 1.8E-42 6E-47 260.4 10.6 139 8-150 18-156 (169)
27 2gjd_A Ubiquitin-conjugating e 100.0 5.9E-42 2E-46 254.7 12.0 133 14-150 5-141 (157)
28 2bep_A Ubiquitin-conjugating e 100.0 8.9E-42 3E-46 254.2 12.5 132 13-150 8-142 (159)
29 2grr_A Ubiquitin-conjugating e 100.0 7.5E-42 2.6E-46 255.1 12.1 135 13-150 7-144 (161)
30 2pwq_A Ubiquitin conjugating e 100.0 5.1E-42 1.7E-46 266.7 10.4 132 13-150 23-154 (216)
31 3bzh_A Ubiquitin-conjugating e 100.0 1.4E-41 4.8E-46 260.5 12.4 131 13-150 48-178 (194)
32 1y8x_A Ubiquitin-conjugating e 100.0 1.6E-41 5.4E-46 253.2 12.0 129 13-150 6-134 (160)
33 1tte_A Ubiquitin-conjugating e 100.0 2.6E-42 8.7E-47 268.2 7.7 132 14-150 3-134 (215)
34 2nvu_C NEDD8-conjugating enzym 100.0 2.6E-41 9E-46 256.3 12.1 132 10-150 23-154 (180)
35 1wzv_A Ubiquitin-conjugating e 100.0 2.4E-41 8.3E-46 250.8 11.0 131 14-150 5-135 (155)
36 2y9m_A Ubiquitin-conjugating e 100.0 6.8E-41 2.3E-45 252.4 13.5 133 13-148 6-149 (172)
37 3k9o_A Ubiquitin-conjugating e 100.0 5E-41 1.7E-45 258.7 12.6 131 14-150 6-139 (201)
38 1c4z_D UBCH7, ubiquitin conjug 100.0 7.5E-41 2.6E-45 248.0 9.6 131 14-150 3-133 (154)
39 3e46_A Ubiquitin-conjugating e 100.0 3.1E-40 1.1E-44 261.8 12.7 134 11-150 55-191 (253)
40 2fo3_A Ubiquitin-conjugating e 100.0 1.2E-39 4.2E-44 233.9 14.0 115 15-136 8-123 (125)
41 2h2y_A Ubiquitin-conjugating e 100.0 5.9E-39 2E-43 233.5 15.9 114 14-134 21-135 (136)
42 2onu_A Ubiquitin-conjugating e 100.0 1.1E-40 3.8E-45 246.7 5.4 127 15-150 4-131 (152)
43 3o2u_A NEDD8-conjugating enzym 100.0 1.5E-39 5E-44 248.6 11.2 135 9-150 25-163 (190)
44 1yf9_A Ubiquitin carrier prote 100.0 2.4E-40 8.1E-45 249.2 6.3 128 13-150 12-140 (171)
45 2z5d_A Ubiquitin-conjugating e 100.0 4.6E-40 1.6E-44 249.1 5.8 127 14-150 26-153 (179)
46 2a7l_A Hypothetical ubiquitin- 100.0 9.9E-38 3.4E-42 227.0 13.0 110 15-130 24-136 (136)
47 4ddg_A Ubiquitin-conjugating e 100.0 5.2E-38 1.8E-42 263.3 12.6 130 14-150 4-133 (399)
48 4ds2_A Ubiquitin-conjugating e 100.0 1.7E-38 5.9E-43 238.2 8.1 132 12-150 7-155 (167)
49 2f4w_A Ubiquitin-conjugating e 100.0 9.9E-36 3.4E-40 226.8 13.9 126 3-135 3-130 (187)
50 3ceg_A Baculoviral IAP repeat- 100.0 3.8E-35 1.3E-39 239.0 12.7 135 9-147 72-224 (323)
51 1zuo_A Hypothetical protein LO 100.0 2.6E-35 8.8E-40 224.4 8.6 122 11-138 25-162 (186)
52 2z6o_A UFM1-conjugating enzyme 99.9 7E-26 2.4E-30 167.9 1.2 97 15-123 34-144 (172)
53 3r3q_A Suppressor protein STP2 99.8 8E-19 2.7E-23 130.4 9.7 116 15-136 30-161 (162)
54 3kpa_A Probable ubiquitin fold 99.7 3.3E-17 1.1E-21 119.2 3.2 81 15-106 36-127 (168)
55 3obq_A Tumor susceptibility ge 99.5 6.8E-14 2.3E-18 102.2 9.5 77 46-131 53-138 (146)
56 2ebm_A RWD domain-containing p 96.4 0.032 1.1E-06 38.5 9.2 67 15-87 12-78 (128)
57 2day_A Ring finger protein 25; 94.7 0.28 9.4E-06 33.7 8.8 109 16-133 11-126 (128)
58 1ukx_A GCN2, GCN2 EIF2alpha ki 94.5 0.37 1.3E-05 33.4 9.2 117 5-131 2-128 (137)
59 2yz0_A Serine/threonine-protei 93.6 0.21 7E-06 34.9 6.4 40 48-88 47-86 (138)
60 2ebk_A RWD domain-containing p 90.7 0.48 1.6E-05 32.5 5.4 66 17-86 11-78 (128)
61 3zqs_A E3 ubiquitin-protein li 89.6 1.3 4.4E-05 33.0 7.1 84 16-130 4-87 (186)
62 2daw_A RWD domain containing p 88.9 0.63 2.1E-05 33.3 4.9 24 65-88 76-99 (154)
63 2dax_A Protein C21ORF6; RWD do 87.5 0.36 1.2E-05 34.3 2.8 24 65-88 74-97 (152)
64 3u3c_B Paxillin LD2 peptide; 4 53.1 10 0.00035 18.4 2.0 19 14-32 6-24 (26)
65 3g9r_A Fusion complex of HIV-1 49.7 9.9 0.00034 20.9 1.9 16 12-27 27-42 (42)
66 2bum_A Protocatechuate 3,4-dio 27.9 55 0.0019 24.4 3.6 25 63-87 110-139 (209)
67 2rf4_B DNA-directed RNA polyme 26.6 28 0.00096 22.5 1.5 15 11-25 60-74 (87)
No 1
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=100.00 E-value=5.2e-44 Score=265.58 Aligned_cols=138 Identities=46% Similarity=0.917 Sum_probs=122.6
Q ss_pred CCccccchHHHHHHHHHHhHcC-CCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEecCCCCCCCCCeEEE
Q 031715 7 GSSVVVPRNFRLLEELERGEKG-IGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRF 85 (154)
Q Consensus 7 ~~~~~~pr~~RL~~El~~l~~~-~~~~~~~~~~~~~~~i~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f 85 (154)
...++++|.+||++|+++++++ +..+ +++.+.++++.++++|+++|.||++||||||+|+|+|.||++||++||+|+|
T Consensus 15 ~~~~~~~~~~RL~kEl~~l~~~~~~~~-i~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F 93 (156)
T 2q0v_A 15 YFQGIVPRSFRLLDELERGQKGNVSEG-VSFGLESADDITLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKF 93 (156)
T ss_dssp CCSSCCCHHHHHHHHHHHHHCC-CCTT-EEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEE
T ss_pred CCcccchHHHHHHHHHHHHHhCCCCCC-eEEEECCCccccceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEE
Confidence 5678889999999999999998 5556 7787765444235699999999999999999999999999999999999999
Q ss_pred ecccccCceecCCCeE---eccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCChhhhh
Q 031715 86 HSRINMTCVNHETGVV---EPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGPHHMDV 149 (154)
Q Consensus 86 ~t~i~HPnv~~~~G~v---cl~~l~~~~~W~p~~~i~~vl~~i~~ll~~P~~~~~~~~~~~~~~~~~ 149 (154)
.|+||||||+. +|+| |+++|+ +|+|+++|++||.+|+++|.+|++++++|+|||++|+++
T Consensus 94 ~t~i~HPNV~~-~G~icisCL~iL~---~WsP~~ti~~vL~sI~~ll~~Pn~~~p~n~~aa~~y~~n 156 (156)
T 2q0v_A 94 DTKIEMSCVDN-CGRVIKNNLHILK---NWNRNYTIETILISLRQEMLSSANKRLPQPNEGEVYSNN 156 (156)
T ss_dssp SBCCCCTTBCT-TSBBCGGGSHHHH---TCCTTCCHHHHHHHHHHHTTSTTTTTCCCCCTTCBC---
T ss_pred EcccccCCCcc-CCeEehhhccccc---CCCCcCcHHHHHHHHHHHHhCCCCCCcCChHHHHHhhhC
Confidence 99999999996 8999 777764 699999999999999999999999999999999999864
No 2
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=100.00 E-value=4.3e-44 Score=266.91 Aligned_cols=138 Identities=48% Similarity=0.909 Sum_probs=123.5
Q ss_pred CCCccccchHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEecCCCCCCCCCeEEE
Q 031715 6 GGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRF 85 (154)
Q Consensus 6 ~~~~~~~pr~~RL~~El~~l~~~~~~~~~~~~~~~~~~i~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f 85 (154)
+.++|++||.+||++|+++++++++++.+++.+++++|+++++|+++|.||++||||||+|+++|.||++||++||+|+|
T Consensus 18 ~~~~v~~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F 97 (160)
T 2a4d_A 18 GSTGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRF 97 (160)
T ss_dssp ---CCCHHHHHHHHHHHHHHHSCCTTSSEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEE
T ss_pred cCCeeechHHHHHHHHHHHHHhCCCCCcEEEEecCCccccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEE
Confidence 35678899999999999999999988877888766666335699999999999999999999999999999999999999
Q ss_pred ecccccCceecCCCeEeccCCCCCCCCCCCCCHHHHHHHHHHHhc-CCCCCCCCCCCCC
Q 031715 86 HSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMA-APHNRKLVQPPEG 143 (154)
Q Consensus 86 ~t~i~HPnv~~~~G~vcl~~l~~~~~W~p~~~i~~vl~~i~~ll~-~P~~~~~~~~~~~ 143 (154)
.|+||||||+..+|+||+++|+..++|+|+++|++||++|+++|. +|+.++|+++|||
T Consensus 98 ~T~i~HPNV~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~~ll~~~pn~~~P~n~eaa 156 (160)
T 2a4d_A 98 VTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQ 156 (160)
T ss_dssp SBCCCCTTBCTTTCBBCGGGSHHHHTCCTTCCHHHHHHHHHHHHTSTTTTTCCCCCTTC
T ss_pred ecCceeCCEECCCCEEehhhcCCccCCCccCcHHHHHHHHHHHHccCCCCCCCCChhhc
Confidence 999999999966999999998423789999999999999999995 6999999999997
No 3
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=100.00 E-value=7.8e-44 Score=259.79 Aligned_cols=131 Identities=55% Similarity=0.993 Sum_probs=116.8
Q ss_pred cchHHHHHHHHHHhHcC-CCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEecCCCCCCCCCeEEEecccc
Q 031715 12 VPRNFRLLEELERGEKG-IGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRIN 90 (154)
Q Consensus 12 ~pr~~RL~~El~~l~~~-~~~~~~~~~~~~~~~i~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~ 90 (154)
++|.+||++|+++++++ +..+ +++.+.++++.++++|+++|.||++||||||+|+++|.||++||++||+|+|.|+||
T Consensus 5 ~~~~~RL~kEl~~l~~~~~~~~-~~~~~~~~~d~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 83 (138)
T 1jat_B 5 VPRNFRLLEELEKGEKGFGPES-CSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISKIN 83 (138)
T ss_dssp CCHHHHHHHHHHHHHC----CC-EEEEESSTTCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESBCCC
T ss_pred HHHHHHHHHHHHHHHhcCCCCC-EEEEeCCCCCCcceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEEcccc
Confidence 57899999999999998 5666 777776555433569999999999999999999999999999999999999999999
Q ss_pred cCceecCCCeE--eccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCChh
Q 031715 91 MTCVNHETGVV--EPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGPHH 146 (154)
Q Consensus 91 HPnv~~~~G~v--cl~~l~~~~~W~p~~~i~~vl~~i~~ll~~P~~~~~~~~~~~~~~ 146 (154)
||||+.++|+| |+++| ++|+|+++|++||.+|+++|.+|++++++|++||++|
T Consensus 84 HPnv~~~~G~i~~cL~~l---~~W~p~~~i~~vl~~i~~ll~~pn~~~p~~~~~~~~y 138 (138)
T 1jat_B 84 LPCVNPTTGEVQTDFHTL---RDWKRAYTMETLLLDLRKEMATPANKKLRQPKEGETF 138 (138)
T ss_dssp CTTBCTTTCBBCTTSHHH---HTCCTTCCHHHHHHHHHHHHTSHHHHTSCCCCTTCBC
T ss_pred cCCEeCCCCEEeeecccC---CCCCCcCcHHHHHHHHHHHHcCCCCCCCCCcchhhcC
Confidence 99999755999 88887 4899999999999999999999999999999999987
No 4
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=100.00 E-value=3.6e-43 Score=264.80 Aligned_cols=137 Identities=26% Similarity=0.400 Sum_probs=107.8
Q ss_pred ccchHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEecCCCCCCCCCeEEEecccc
Q 031715 11 VVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRIN 90 (154)
Q Consensus 11 ~~pr~~RL~~El~~l~~~~~~~~~~~~~~~~~~i~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~ 90 (154)
+..+.+||++|+++|+++++++ +.+.+.+++|++ +|+++|.||++||||||+|+|+|.||++||++||+|+|.|+||
T Consensus 15 ~~~~~~rL~kEl~~l~~~~~~g-i~~~p~~~~nl~--~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~i~ 91 (172)
T 2awf_A 15 VPRGSLLLRRQLAELNKNPVEG-FSAGLIDDNDLY--RWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIW 91 (172)
T ss_dssp CCTTHHHHHHHHHHHHHSCCTT-EEEEESSTTCTT--EEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCC
T ss_pred hHHHHHHHHHHHHHHHhCCCCC-EEEEECCCcccc--ccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccCCCc
Confidence 3345889999999999998888 777776667854 9999999999999999999999999999999999999999999
Q ss_pred cCceecCCCeEeccCCCC-----------CCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCChhhhhhc
Q 031715 91 MTCVNHETGVVEPKKFGL-----------LVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGPHHMDVYA 151 (154)
Q Consensus 91 HPnv~~~~G~vcl~~l~~-----------~~~W~p~~~i~~vl~~i~~ll~~P~~~~~~~~~~~~~~~~~~~ 151 (154)
||||+. +|+||+++|.. .++|+|+++|++||++|+++|.+|++++|+|++||++|+++.+
T Consensus 92 HPNV~~-~G~IClsiL~~~~~d~~~~~~~~~~WsP~~ti~~vL~sI~sll~~Pn~~~p~n~~aa~~~~~d~~ 162 (172)
T 2awf_A 92 HPNVDK-NGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRN 162 (172)
T ss_dssp CTTBCT-TCBBCCGGGSCC---------CTTSCCTTCCHHHHHHHHHHHHSCC-------------------
T ss_pred cCCCCC-CCcEehhhcCCcccccccccccCCCCCCcCcHHHHHHHHHHHHHCcCCCCccCHHHHHHHHHCcH
Confidence 999996 89999999852 2689999999999999999999999999999999999997653
No 5
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=9e-44 Score=264.75 Aligned_cols=139 Identities=21% Similarity=0.327 Sum_probs=125.4
Q ss_pred CCCCccccchHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEecCCCCCCCCCeEE
Q 031715 5 SGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVR 84 (154)
Q Consensus 5 ~~~~~~~~pr~~RL~~El~~l~~~~~~~~~~~~~~~~~~i~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~ 84 (154)
++...++....+||++|+++|+++++++ +.+.+ +++|+ ++|+++|.||+|||||||+|+|+|.||++||++||+|+
T Consensus 5 ~~~~~~s~~~~~RL~kEl~~l~~~~~~g-i~~~~-~~~~l--~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~ 80 (158)
T 1zdn_A 5 SNVENLPPHIIRLVYKEVTTLTADPPDG-IKVFP-NEEDL--TDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGY 80 (158)
T ss_dssp ---CCSCHHHHHHHHHHHHHHHHSCCTT-EEEEE-CSSCT--TEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEE
T ss_pred ccccccCHHHHHHHHHHHHHHHhCCCCC-EEEEE-CCCCh--hheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEE
Confidence 3445566667899999999999999888 66665 66775 49999999999999999999999999999999999999
Q ss_pred EecccccCceecCCCeEeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCChhhhhh
Q 031715 85 FHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGPHHMDVY 150 (154)
Q Consensus 85 f~t~i~HPnv~~~~G~vcl~~l~~~~~W~p~~~i~~vl~~i~~ll~~P~~~~~~~~~~~~~~~~~~ 150 (154)
|.|+||||||+. +|+||+++|. ++|+|+++|.+||.+|+++|.+|++++|+|++|+++|+++.
T Consensus 81 f~t~i~HPnv~~-~G~iCl~iL~--~~W~p~~~i~~vL~~i~~ll~~pn~~~p~n~~aa~~~~~d~ 143 (158)
T 1zdn_A 81 FLTKIFHPNVGA-NGEICVNVLK--RDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENY 143 (158)
T ss_dssp ESSCCCCTTBCT-TSBBCHHHHT--TTCCTTCCHHHHHHHHHHHHHSCCGGGCSSHHHHHHHHHCH
T ss_pred eccCcccCCCCC-CCEEehhhcC--CCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCH
Confidence 999999999996 8999999986 89999999999999999999999999999999999998654
No 6
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=4.2e-43 Score=260.62 Aligned_cols=133 Identities=28% Similarity=0.431 Sum_probs=121.2
Q ss_pred chHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEecCCCCCCCCCeEEEecccccC
Q 031715 13 PRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMT 92 (154)
Q Consensus 13 pr~~RL~~El~~l~~~~~~~~~~~~~~~~~~i~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~HP 92 (154)
.+.+||++|+++++++++++ +.+.+ +++|+ ++|+++|.||++||||||+|+|+|.||++||++||+|+|.|+||||
T Consensus 9 ~~~~RL~kEl~~l~~~~~~~-i~~~p-~~~~l--~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 84 (156)
T 2e2c_A 9 SVSKRLQQELRTLLMSGDPG-ITAFP-DGDNL--FKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHP 84 (156)
T ss_dssp CHHHHHHHHHHHHHHHCCTT-EEEEE-SSSCT--TEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBT
T ss_pred HHHHHHHHHHHHHHhCCCCC-EEEEE-CCCCc--cEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCcccC
Confidence 35889999999999988888 66664 56675 4999999999999999999999999999999999999999999999
Q ss_pred ceecCCCeEeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCChhhhhhcc
Q 031715 93 CVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGPHHMDVYAY 152 (154)
Q Consensus 93 nv~~~~G~vcl~~l~~~~~W~p~~~i~~vl~~i~~ll~~P~~~~~~~~~~~~~~~~~~~~ 152 (154)
||+. +|.||+++|. ++|+|+++|.+||.+|+++|.+|++++|+|++|+.+|.+.-+|
T Consensus 85 nv~~-~G~iCl~iL~--~~W~p~~~i~~vL~si~~ll~~pn~~~p~n~~aa~~~~d~~~y 141 (156)
T 2e2c_A 85 NVDQ-SGNICLDILK--ENWTASYDVRTILLSLQSLLGEPNNASPLNAQAADMWSNQTEY 141 (156)
T ss_dssp TBCT-TCBBCCGGGT--TTCCTTCCHHHHHHHHHHHTTSCCCSSCSCHHHHHHTTCHHHH
T ss_pred CCcc-CceEECcccc--ccCCCCCcHHHHHHHHHHHHhCCCCCCHHHHHHHHHhcCHHHH
Confidence 9996 9999999996 8999999999999999999999999999999999999443333
No 7
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=3e-43 Score=263.54 Aligned_cols=134 Identities=24% Similarity=0.298 Sum_probs=123.0
Q ss_pred chHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEecCCCCCCCCCeEEEecccccC
Q 031715 13 PRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMT 92 (154)
Q Consensus 13 pr~~RL~~El~~l~~~~~~~~~~~~~~~~~~i~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~HP 92 (154)
.+.+||++|+++|+++++++ +.+.+.+++|+ ++|+++|.||+|||||||+|+|+|.||++||++||+|+|.|+||||
T Consensus 4 ~a~~RL~kEl~~l~~~~~~g-i~~~~~~~~~l--~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 80 (165)
T 2ucz_A 4 TAQKRLLKELQQLIKDSPPG-IVAGPKSENNI--FIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILHP 80 (165)
T ss_dssp HHHHHHHHHHHHHHHSCCTT-EEEEESSSSCC--SEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCSCT
T ss_pred HHHHHHHHHHHHHHhCCCCC-EEEEECCCCCc--cEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeCCCccC
Confidence 35789999999999998888 77776666775 4999999999999999999999999999999999999999999999
Q ss_pred ceecCCCeEeccCCCC-----------CCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCChhhhhh
Q 031715 93 CVNHETGVVEPKKFGL-----------LVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGPHHMDVY 150 (154)
Q Consensus 93 nv~~~~G~vcl~~l~~-----------~~~W~p~~~i~~vl~~i~~ll~~P~~~~~~~~~~~~~~~~~~ 150 (154)
||+. +|+||+++|+. .++|+|+++|.+||.+|+++|.+|++++|+|++||++|+++.
T Consensus 81 Nv~~-~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~~~ 148 (165)
T 2ucz_A 81 NIYP-NGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLSEPNIESGANIDACILWRDNR 148 (165)
T ss_dssp TBCT-TSBBCCGGGSCCCSCTTSTTTTTTSCCTTCCHHHHHHHHHHHHHSCCGGGCCCHHHHHHHHTTH
T ss_pred CCCC-CCcEeehhhCCccccccccCCCCCCCCCcCcHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCH
Confidence 9996 99999999931 378999999999999999999999999999999999998654
No 8
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=100.00 E-value=3.3e-43 Score=264.55 Aligned_cols=136 Identities=48% Similarity=0.902 Sum_probs=122.9
Q ss_pred CccccchHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEecCCCCCCCCCeEEEec
Q 031715 8 SSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHS 87 (154)
Q Consensus 8 ~~~~~pr~~RL~~El~~l~~~~~~~~~~~~~~~~~~i~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t 87 (154)
+.+++||.+||++|+++++++++++++++.+++++|+++++|+++|.||++||||||+|+++|.||++||++||+|+|.|
T Consensus 30 ~~v~~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T 109 (170)
T 2hlw_A 30 KGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVT 109 (170)
T ss_dssp CCCCCCHHHHHHHHHHHHHHCCGGGCEEEEESSTTCSSCCBEEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEECB
T ss_pred CcccCHHHHHHHHHHHHHHhCCCCCcEEEEecCcccccceeeEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEec
Confidence 44678999999999999999988887788776666533569999999999999999999999999999999999999999
Q ss_pred ccccCceecCCCeEeccCCCCCCCCCCCCCHHHHHHHHHHHhc-CCCCCCCCCCCCC
Q 031715 88 RINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMA-APHNRKLVQPPEG 143 (154)
Q Consensus 88 ~i~HPnv~~~~G~vcl~~l~~~~~W~p~~~i~~vl~~i~~ll~-~P~~~~~~~~~~~ 143 (154)
+||||||+..+|.||+++|+..++|+|+++|++||.+|+++|. +|+.++|+++|||
T Consensus 110 ~i~HPNV~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~~ll~~~pn~~~P~n~eaa 166 (170)
T 2hlw_A 110 KINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQ 166 (170)
T ss_dssp CCCCSSBCSSSCBBCTTTCHHHHTCCSSCCHHHHHHHHHHHHHSTTTSSSCCCSSCC
T ss_pred ccccCCEeCCCCEEEhhhcCCCCCCCccCcHHHHHHHHHHHHccCCCCCCCCCcccc
Confidence 9999999955999999998423789999999999999999997 5999999999997
No 9
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00 E-value=1.5e-43 Score=261.11 Aligned_cols=132 Identities=20% Similarity=0.365 Sum_probs=122.3
Q ss_pred hHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEecCCCCCCCCCeEEEecccccCc
Q 031715 14 RNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTC 93 (154)
Q Consensus 14 r~~RL~~El~~l~~~~~~~~~~~~~~~~~~i~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~HPn 93 (154)
+.+||++|+++++++++++ +.+.+.+++|+ ++|+++|.||++||||||+|+++|.||++||++||+|+|.|+|||||
T Consensus 2 ~~~RL~~El~~l~~~~~~~-i~~~~~~~~~l--~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 78 (149)
T 1fxt_A 2 RAKRIMKEIQAVKDDPAAH-ITLEFVSESDI--HHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPN 78 (149)
T ss_dssp CHHHHHHHHHHHHHCGGGC-CEEEESSSSCS--SEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCCBTT
T ss_pred hHHHHHHHHHHHHhCCCCC-EEEEECCCCCc--eEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCccCC
Confidence 3689999999999998888 67776555574 59999999999999999999999999999999999999999999999
Q ss_pred eecCCCeEeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCChhhhhh
Q 031715 94 VNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGPHHMDVY 150 (154)
Q Consensus 94 v~~~~G~vcl~~l~~~~~W~p~~~i~~vl~~i~~ll~~P~~~~~~~~~~~~~~~~~~ 150 (154)
|+..+|.||+++|. ++|+|+++|.+||.+|+++|.+|++++|+|++++++|+++.
T Consensus 79 i~~~~G~iCl~iL~--~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~d~ 133 (149)
T 1fxt_A 79 ISSVTGAICLDILK--NAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDR 133 (149)
T ss_dssp BCSSSCCBCCHHHH--TSCCTTCCHHHHHHHHHHHHHSCCSSSCSSHHHHHHHHHCS
T ss_pred CcCCCCeEeCCcCC--CCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCH
Confidence 99659999999986 89999999999999999999999999999999999998754
No 10
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=9.3e-43 Score=260.55 Aligned_cols=133 Identities=21% Similarity=0.330 Sum_probs=122.5
Q ss_pred hHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEecCCCCCCCCCeEEEecccccCc
Q 031715 14 RNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTC 93 (154)
Q Consensus 14 r~~RL~~El~~l~~~~~~~~~~~~~~~~~~i~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~HPn 93 (154)
..+||++|+++++++++++ +.+.+.+++|++ +|+++|.||++|||+||+|+|+|.||++||++||+|+|.|+|||||
T Consensus 4 a~~RL~kEl~~l~~~~~~g-i~~~~~~~~nl~--~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPN 80 (164)
T 3h8k_A 4 ALKRLMAEYKQLTLNPPEG-IVAGPMNEENFF--EWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPN 80 (164)
T ss_dssp HHHHHHHHHHHHHHSCCTT-EEEEESSTTCTT--EEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTT
T ss_pred HHHHHHHHHHHHHhCCCCC-EEEEECCCCCcc--EEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCCccCC
Confidence 4789999999999999888 777766666854 9999999999999999999999999999999999999999999999
Q ss_pred eecCCCeEeccCCCC-----------CCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCChhhhhh
Q 031715 94 VNHETGVVEPKKFGL-----------LVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGPHHMDVY 150 (154)
Q Consensus 94 v~~~~G~vcl~~l~~-----------~~~W~p~~~i~~vl~~i~~ll~~P~~~~~~~~~~~~~~~~~~ 150 (154)
|+. +|+||+++|.. .++|+|+++|++||.+|+++|.+|++++|+|++|+.+|+++.
T Consensus 81 V~~-~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~ti~~vL~~i~~ll~~pn~~~p~n~~aa~~~~~~~ 147 (164)
T 3h8k_A 81 IYP-DGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDR 147 (164)
T ss_dssp BCT-TSBBCCGGGSCSCSCCCSCCTTCCCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHHHHHHHHHCH
T ss_pred CCC-CCcEeeecccCcccccccccccccCCCCCCcHHHHHHHHHHHHcCCCCCCccCHHHHHHHHHCH
Confidence 995 99999999851 278999999999999999999999999999999999998654
No 11
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=9.3e-43 Score=258.31 Aligned_cols=129 Identities=21% Similarity=0.359 Sum_probs=118.4
Q ss_pred HHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEecCCCCCCCCCeEEEecccccCce
Q 031715 15 NFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCV 94 (154)
Q Consensus 15 ~~RL~~El~~l~~~~~~~~~~~~~~~~~~i~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~HPnv 94 (154)
.+||++|+++++++++++ +.+.+ .++|+ ++|+++|.||++||||||+|+|+|.||++||++||+|+|.|+||||||
T Consensus 7 ~~RL~kEl~~l~~~~~~~-i~~~~-~~~~l--~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 82 (154)
T 2c2v_B 7 PRRIIKETQRLLAEPVPG-IKAEP-DESNA--RYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNV 82 (154)
T ss_dssp CHHHHHHHHHHHHSCCTT-EEEEE-CSSCT--TEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTB
T ss_pred HHHHHHHHHHHHhCCCCC-EEEEE-CCCch--heEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCcccCcC
Confidence 579999999999998888 67765 55674 499999999999999999999999999999999999999999999999
Q ss_pred ecCCCeEeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCChhhhhh
Q 031715 95 NHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGPHHMDVY 150 (154)
Q Consensus 95 ~~~~G~vcl~~l~~~~~W~p~~~i~~vl~~i~~ll~~P~~~~~~~~~~~~~~~~~~ 150 (154)
+. +|+||+++|. ++|+|+++|.+||.+|+++|.+|++++|+|+++|.+|+++.
T Consensus 83 ~~-~G~iCl~iL~--~~W~p~~~i~~vl~~i~~ll~~pn~~~p~n~~aa~~~~~d~ 135 (154)
T 2c2v_B 83 DK-LGRICLDILK--DKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNE 135 (154)
T ss_dssp CT-TCBBCCHHHH--TSCCTTCCHHHHHHHHHHHTTSCCCCCC--CHHHHHHHHHH
T ss_pred cc-CCeEEchhcc--CCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCH
Confidence 95 8999999986 89999999999999999999999999999999999998764
No 12
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00 E-value=1.1e-42 Score=260.11 Aligned_cols=135 Identities=21% Similarity=0.288 Sum_probs=120.4
Q ss_pred hHHHHHHHHHHhHcCCCCCceEEeecCC-C-CCceeEEEEEEECCCCCCCCCcEEEEEEecCCCCCCCCCeEEEeccccc
Q 031715 14 RNFRLLEELERGEKGIGDGTVSYGMDDG-D-DIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINM 91 (154)
Q Consensus 14 r~~RL~~El~~l~~~~~~~~~~~~~~~~-~-~i~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~H 91 (154)
..+||++|++++++++++|+ .+.+.++ | +.++++|+++|.||+|||||||+|+|+|.||++||++||+|+|.|+|||
T Consensus 11 ~~~RL~kEl~~l~~~~p~gi-~~~p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t~i~H 89 (163)
T 3rcz_B 11 CKTRLQEERKQWRRDHPFGF-YAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFH 89 (163)
T ss_dssp HHHHHHHHHHHHHHSCCTTC-EEEEEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCS
T ss_pred HHHHHHHHHHHHHhCCCCCE-EEEEccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeCCCcc
Confidence 37899999999999999994 5554332 2 1226799999999999999999999999999999999999999999999
Q ss_pred CceecCCCeEeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCChhhhhh
Q 031715 92 TCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGPHHMDVY 150 (154)
Q Consensus 92 Pnv~~~~G~vcl~~l~~~~~W~p~~~i~~vl~~i~~ll~~P~~~~~~~~~~~~~~~~~~ 150 (154)
|||+. +|.||+++|...++|+|+++|++||.+|+++|.+|++++|+|++++.+|+++.
T Consensus 90 PnV~~-~G~iCl~iL~~~~~W~p~~ti~~vL~~i~~ll~~P~~~~p~n~~aa~~~~~d~ 147 (163)
T 3rcz_B 90 PNVYP-SGTVCLSILNEEEGWKPAITIKQILLGIQDLLDDPNIASPAQTEAYTMFKKDK 147 (163)
T ss_dssp TTBCT-TSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHTSCCTTSCSCHHHHHHHHHCH
T ss_pred CCCCC-CCcEeccccCCCCCcCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCH
Confidence 99994 99999999973346999999999999999999999999999999999998653
No 13
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=1.4e-42 Score=260.24 Aligned_cols=132 Identities=24% Similarity=0.398 Sum_probs=122.5
Q ss_pred cchHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEecCCCCCCCCCeEEEeccccc
Q 031715 12 VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINM 91 (154)
Q Consensus 12 ~pr~~RL~~El~~l~~~~~~~~~~~~~~~~~~i~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~H 91 (154)
..+.+||++|+++|+++++++ +.+.+ +++|+ ++|+++|.||++||||||+|+|+|.||++||++||+|+|.|+|||
T Consensus 20 ~~~~~RL~kEl~~l~~~~~~g-i~~~~-~~~nl--~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~H 95 (166)
T 2ayv_A 20 QGALKRINKELNDLSKDPPTN-CSAGP-VGDDM--FHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKIYH 95 (166)
T ss_dssp TTHHHHHHHHHHHHHHSCCTT-EEEEE-CSSCT--TEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCB
T ss_pred cHHHHHHHHHHHHHHhCCCCC-EEEEE-cCCCc--ceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCCcC
Confidence 346899999999999998888 67765 55675 499999999999999999999999999999999999999999999
Q ss_pred CceecCCCeEeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCChhhhhh
Q 031715 92 TCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGPHHMDVY 150 (154)
Q Consensus 92 Pnv~~~~G~vcl~~l~~~~~W~p~~~i~~vl~~i~~ll~~P~~~~~~~~~~~~~~~~~~ 150 (154)
|||+. +|.||+++|. ++|+|+++|.+||.+|+++|.+|++++|+|++++.+|+++.
T Consensus 96 PNI~~-~G~ICL~iL~--~~WsP~~ti~~vL~sI~sll~~pn~~~Pln~~aa~l~~~d~ 151 (166)
T 2ayv_A 96 PNINS-QGAICLDILK--DQWSPALTISKVLLSISSLLTDPNPDDPLVPEIAHLYKSDR 151 (166)
T ss_dssp TTBCT-TCBBCCGGGT--TTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCH
T ss_pred CcCCC-CCeEEccccc--ccCCCCCcHHHHHHHHHHHHhCCCCCchhhHHHHHHHHHCH
Confidence 99995 9999999997 89999999999999999999999999999999999998654
No 14
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=1.4e-42 Score=256.55 Aligned_cols=130 Identities=25% Similarity=0.399 Sum_probs=121.6
Q ss_pred hHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEecCCCCCCCCCeEEEecccccCc
Q 031715 14 RNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTC 93 (154)
Q Consensus 14 r~~RL~~El~~l~~~~~~~~~~~~~~~~~~i~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~HPn 93 (154)
+.+||++|+++++++++++ +.+.+ .++|+ ++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+|||||
T Consensus 5 a~~RL~kEl~~l~~~~~~~-i~~~p-~~~nl--~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 80 (151)
T 4gpr_A 5 AMRRIQKELREIQQDPPCN-CSAGP-VGDDI--FHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVYHPN 80 (151)
T ss_dssp HHHHHHHHHHHHHHSCCTT-EEEEE-SSSCT--TEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTT
T ss_pred HHHHHHHHHHHHHhCCCCC-EEEEE-cCCCc--eEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCcccce
Confidence 4789999999999999888 67775 45675 49999999999999999999999999999999999999999999999
Q ss_pred eecCCCeEeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCChhhhhh
Q 031715 94 VNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGPHHMDVY 150 (154)
Q Consensus 94 v~~~~G~vcl~~l~~~~~W~p~~~i~~vl~~i~~ll~~P~~~~~~~~~~~~~~~~~~ 150 (154)
|+. +|+||+++|. ++|+|+++|++||.+|+++|.+|++++|+|++++++|+++.
T Consensus 81 v~~-~G~iCl~iL~--~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~d~ 134 (151)
T 4gpr_A 81 INK-NGVICLDILK--DQWSPALTLSRVLLSISSLLTDPNPSDPLDPEVANVLRANK 134 (151)
T ss_dssp BCT-TCBBCCGGGT--TTCCTTCCHHHHHHHHHHHHHCCCTTSCSSHHHHHHHHHCH
T ss_pred ECC-CCEEEccccc--CCCCCCCcHHHHHHHHHHHhcCCCCCCchhHHHHHHHHHCH
Confidence 995 9999999996 89999999999999999999999999999999999998764
No 15
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=1.6e-42 Score=260.59 Aligned_cols=131 Identities=27% Similarity=0.434 Sum_probs=121.4
Q ss_pred chHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEecCCCCCCCCCeEEEecccccC
Q 031715 13 PRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMT 92 (154)
Q Consensus 13 pr~~RL~~El~~l~~~~~~~~~~~~~~~~~~i~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~HP 92 (154)
++.+||++|+++|+++++++ +.+.+ .++| +++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|+||||
T Consensus 4 ~a~~RL~kEl~~l~~~~~~g-i~~~p-~~~n--l~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HP 79 (169)
T 1ayz_A 4 PARRRLMRDFKRMKEDAPPG-VSASP-LPDN--VMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHP 79 (169)
T ss_dssp HHHHHHHHHHHHHHHSCCTT-EEEEE-ETTE--EEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCT
T ss_pred HHHHHHHHHHHHHHhCCCCC-EEEEe-cCCc--cccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccccCCccC
Confidence 45789999999999999888 56654 4566 56999999999999999999999999999999999999999999999
Q ss_pred ceecCCCeEeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCChhhhhh
Q 031715 93 CVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGPHHMDVY 150 (154)
Q Consensus 93 nv~~~~G~vcl~~l~~~~~W~p~~~i~~vl~~i~~ll~~P~~~~~~~~~~~~~~~~~~ 150 (154)
||+. +|.||+++|. +.|+|+++|.+||.+|+++|.+|++++|+|++++.+|++..
T Consensus 80 NI~~-~G~ICl~iL~--~~WsP~~~i~~vL~si~~ll~~Pn~~~P~n~~aa~~~~~d~ 134 (169)
T 1ayz_A 80 NVYA-NGEICLDILQ--NRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHK 134 (169)
T ss_dssp TBCT-TSBBCCGGGT--TTCCTTCCHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHCH
T ss_pred CCCC-CCeEeehhhc--cCCCCcCcHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHCH
Confidence 9996 9999999996 89999999999999999999999999999999999998653
No 16
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00 E-value=2.1e-42 Score=255.13 Aligned_cols=129 Identities=21% Similarity=0.353 Sum_probs=120.0
Q ss_pred HHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEecCCCCCCCCCeEEEecccccCce
Q 031715 15 NFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCV 94 (154)
Q Consensus 15 ~~RL~~El~~l~~~~~~~~~~~~~~~~~~i~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~HPnv 94 (154)
.+||++|+++++++++++ +.+.+ +++| +++|+++|.||++||||||.|+|+|.||++||++||+|+|.|+||||||
T Consensus 3 ~~RL~kEl~~l~~~~~~~-i~~~~-~~~~--l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 78 (149)
T 2r0j_A 3 PRRITKETQNLANEPPPG-IMAVP-VPEN--YRHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYHPNI 78 (149)
T ss_dssp CHHHHHHHHHHHHSCCTT-EEEEE-ETTE--EEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCBTTB
T ss_pred HHHHHHHHHHHHhCCCCC-EEEEE-CCCc--ccEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCccCCC
Confidence 479999999999998888 67765 4566 5699999999999999999999999999999999999999999999999
Q ss_pred ecCCCeEeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCChhhhhh
Q 031715 95 NHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGPHHMDVY 150 (154)
Q Consensus 95 ~~~~G~vcl~~l~~~~~W~p~~~i~~vl~~i~~ll~~P~~~~~~~~~~~~~~~~~~ 150 (154)
+. +|+||+++|. ++|+|+++|.+||.+|+++|.+|++++|+|++++.+|+++.
T Consensus 79 ~~-~G~iCl~iL~--~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~ 131 (149)
T 2r0j_A 79 DK-LGRICLDILK--DKWSPALQIRTVLLSIQALLSSPEPDDPLDSKVAEHFKQDK 131 (149)
T ss_dssp CT-TCBBCCGGGT--TTCCTTSCHHHHHHHHHHHHHSCCTTSCSSCHHHHHHHHCH
T ss_pred CC-CCEEechhcC--CCCCCCCcHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCH
Confidence 96 8999999996 89999999999999999999999999999999999998653
No 17
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=100.00 E-value=2.3e-42 Score=262.77 Aligned_cols=131 Identities=24% Similarity=0.343 Sum_probs=121.6
Q ss_pred hHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEecCCCCCCCCCeEEEecccccCc
Q 031715 14 RNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTC 93 (154)
Q Consensus 14 r~~RL~~El~~l~~~~~~~~~~~~~~~~~~i~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~HPn 93 (154)
+.|||++|+++|++++++| +.+.+++++|++ +|+++|.||++|||+||+|+++|.||++||++||+|+|.|+|||||
T Consensus 8 a~kRL~kEl~~l~~~~~~g-i~~~~~~~~nl~--~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 84 (183)
T 3rz3_A 8 SQKALLLELKGLQEEPVEG-FRVTLVDEGDLY--NWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPN 84 (183)
T ss_dssp HHHHHHHHHHHHHHSCCTT-EEEEECTTCCTT--EEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCCTT
T ss_pred HHHHHHHHHHHHHhCCCCC-EEEEecCccchh--heeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCCCccCC
Confidence 4789999999999999888 777767888855 9999999999999999999999999999999999999999999999
Q ss_pred eecCCCeEeccCCCC-----------CCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCChhhh
Q 031715 94 VNHETGVVEPKKFGL-----------LVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGPHHMD 148 (154)
Q Consensus 94 v~~~~G~vcl~~l~~-----------~~~W~p~~~i~~vl~~i~~ll~~P~~~~~~~~~~~~~~~~ 148 (154)
|+. +|+||+++|+. .++|+|+++|++||++|+++|.+|++++|+|.+|+.+|++
T Consensus 85 V~~-~G~iClsiL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~ 149 (183)
T 3rz3_A 85 IYE-TGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYRK 149 (183)
T ss_dssp BCT-TSBBCCTTC--------------CCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHHHHHHHHH
T ss_pred CCC-CCcEehhhcCcccccccccccccCCCCCcCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHh
Confidence 996 99999999951 2789999999999999999999999999999999999987
No 18
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=100.00 E-value=1.3e-42 Score=260.43 Aligned_cols=141 Identities=18% Similarity=0.230 Sum_probs=126.5
Q ss_pred CCCCccccchHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEecCCCCCCCCCeEE
Q 031715 5 SGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVR 84 (154)
Q Consensus 5 ~~~~~~~~pr~~RL~~El~~l~~~~~~~~~~~~~~~~~~i~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~ 84 (154)
+.+++.+.++.+||++|+++|+++++++ +.+.+++++++ +.|+++| ||++|||+||+|+++|.||++||++||+|+
T Consensus 6 ~~~~~~~s~~~~RL~kEl~~l~~~~~~g-i~~~~~~~~~l--~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~ 81 (167)
T 3fn1_B 6 SDSTRRVSVRDKLLVKEVAELEANLPCT-CKVHFPDPNKL--HCFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVK 81 (167)
T ss_dssp --CCCCCCHHHHHHHHHHHHHGGGSCTT-EEEECSSSSCT--TEEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEE
T ss_pred CCCccchhHHHHHHHHHHHHHHhCCCCC-EEEEeCCCCcc--eeEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeE
Confidence 4456677789999999999999999888 77877677775 4999998 899999999999999999999999999999
Q ss_pred EecccccCceecCCCeEeccCCCC----CCCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCCCCChhhhhh
Q 031715 85 FHSRINMTCVNHETGVVEPKKFGL----LVNWQREYTMEDILTQLKKEMAA-PHNRKLVQPPEGPHHMDVY 150 (154)
Q Consensus 85 f~t~i~HPnv~~~~G~vcl~~l~~----~~~W~p~~~i~~vl~~i~~ll~~-P~~~~~~~~~~~~~~~~~~ 150 (154)
|.|+||||||+ .+|.||+++|.. .++|+|+++|.+||.+|+++|.+ |++++|+|++|+.+|+++.
T Consensus 82 f~t~i~HPnv~-~~G~iCl~iL~~~~~~~~~W~p~~~i~~vl~~i~~ll~~~pn~~~p~n~eaa~~~~~~~ 151 (167)
T 3fn1_B 82 CLTKIWHPNIT-ETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDK 151 (167)
T ss_dssp ECSCCCCSSBC-TTCCBCCGGGSBCSSSTTSBCTTCCHHHHHHHHHHTTTTTCCSSSCSCHHHHHHHHHCH
T ss_pred ecCCcccCCCC-CCCEEechhhccCCCCCCCCCCcCcHHHHHHHHHHHHcCCCCCCcchhHHHHHHHHHCH
Confidence 99999999999 599999999961 13799999999999999999999 7999999999999998654
No 19
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=2.2e-42 Score=255.16 Aligned_cols=130 Identities=25% Similarity=0.402 Sum_probs=120.9
Q ss_pred hHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEecCCCCCCCCCeEEEecccccCc
Q 031715 14 RNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTC 93 (154)
Q Consensus 14 r~~RL~~El~~l~~~~~~~~~~~~~~~~~~i~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~HPn 93 (154)
+.+||++|+++++++++++ +.+.+ +++| +++|+++|.||++||||||+|+++|.||++||++||+|+|.|+|||||
T Consensus 5 ~~~RL~kEl~~l~~~~~~~-~~~~~-~~~~--l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 80 (150)
T 1z2u_A 5 ALKRIQKELQDLGRDPPAQ-CSAGP-VGDD--LFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPN 80 (150)
T ss_dssp HHHHHHHHHHHHHHSCCSS-EEEEE-ETTE--EEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTT
T ss_pred HHHHHHHHHHHHHhCCCCC-EEEEE-CCCc--ceEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCcccCc
Confidence 4789999999999998888 67765 4566 569999999999999999999999999999999999999999999999
Q ss_pred eecCCCeEeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCChhhhhh
Q 031715 94 VNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGPHHMDVY 150 (154)
Q Consensus 94 v~~~~G~vcl~~l~~~~~W~p~~~i~~vl~~i~~ll~~P~~~~~~~~~~~~~~~~~~ 150 (154)
|+. +|.||+++|. ++|+|+++|.+||.+|+++|.+|++++|+|++++.+|+++.
T Consensus 81 v~~-~G~iCl~iL~--~~W~p~~~i~~vl~~i~~ll~~pn~~~p~n~~aa~~~~~~~ 134 (150)
T 1z2u_A 81 INS-NGSICLDILR--SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDR 134 (150)
T ss_dssp BCT-TCBBCCGGGT--TTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCH
T ss_pred CCC-CCeEeecccc--CCCCCCCCHHHHHHHHHHHhhCCCCCCccCHHHHHHHHHHH
Confidence 995 9999999996 89999999999999999999999999999999999998654
No 20
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=2.7e-42 Score=255.21 Aligned_cols=131 Identities=24% Similarity=0.470 Sum_probs=121.4
Q ss_pred chHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEecCCCCCCCCCeEEEecccccC
Q 031715 13 PRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMT 92 (154)
Q Consensus 13 pr~~RL~~El~~l~~~~~~~~~~~~~~~~~~i~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~HP 92 (154)
++.+||++|+++++++++++ +.+.+ +++| +++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+||||
T Consensus 4 ~a~~RL~~E~~~l~~~~~~~-i~~~~-~~~~--l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 79 (152)
T 2aak_A 4 PARKRLMRDFKRLQQDPPAG-ISGAP-QDNN--IMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHP 79 (152)
T ss_dssp HHHHHHHHHHHHHHHSCCTT-EEEEE-ETTE--EEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCT
T ss_pred HHHHHHHHHHHHHHhCCCCC-EEEEe-CCCC--ccEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEecCcccC
Confidence 45789999999999999888 56654 5666 56999999999999999999999999999999999999999999999
Q ss_pred ceecCCCeEeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCChhhhhh
Q 031715 93 CVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGPHHMDVY 150 (154)
Q Consensus 93 nv~~~~G~vcl~~l~~~~~W~p~~~i~~vl~~i~~ll~~P~~~~~~~~~~~~~~~~~~ 150 (154)
||+. +|.||+++|. ++|+|+++|.+||.+|+++|.+|++++|+|++|+.+|+++.
T Consensus 80 nv~~-~G~iCl~iL~--~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~ 134 (152)
T 2aak_A 80 NIYA-DGSICLDILQ--NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSESK 134 (152)
T ss_dssp TBCT-TSBBCCGGGT--TSCCTTCCHHHHHHHHHHHHTSCCTTSCSSHHHHHHHHHCH
T ss_pred CCCC-CCEEechhhc--CCCCCCCcHHHHHHHHHHHHhCCCCCccccHHHHHHHHHCH
Confidence 9996 9999999996 89999999999999999999999999999999999998654
No 21
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=3.2e-42 Score=258.11 Aligned_cols=131 Identities=24% Similarity=0.400 Sum_probs=121.7
Q ss_pred chHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEecCCCCCCCCCeEEEecccccC
Q 031715 13 PRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMT 92 (154)
Q Consensus 13 pr~~RL~~El~~l~~~~~~~~~~~~~~~~~~i~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~HP 92 (154)
.+.+||++|+++++++++.+ +.+.+ +++|+ ++|+++|.||++||||||+|+|+|.||++||++||+|+|.|+||||
T Consensus 19 ~~~~RL~kEl~~l~~~~~~g-i~~~p-~~~nl--~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i~HP 94 (165)
T 2c4o_A 19 MALKRIHKELNDLARDPPAQ-CSAGP-VGDDM--FHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHP 94 (165)
T ss_dssp HHHHHHHHHHHHHHSSCCTT-EEEEE-SSSCT--TEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBT
T ss_pred HHHHHHHHHHHHHHhCCCCC-EEEEE-cCCCc--ceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecCCcCC
Confidence 36889999999999998888 67775 55675 4999999999999999999999999999999999999999999999
Q ss_pred ceecCCCeEeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCChhhhhh
Q 031715 93 CVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGPHHMDVY 150 (154)
Q Consensus 93 nv~~~~G~vcl~~l~~~~~W~p~~~i~~vl~~i~~ll~~P~~~~~~~~~~~~~~~~~~ 150 (154)
||+. +|.||+++|. ++|+|+++|.+||.+|+++|.+|++++|+|++++.+|.++.
T Consensus 95 nV~~-~G~ICl~iL~--~~W~P~~ti~~vL~si~~ll~~pn~~~P~n~~aa~~~~~d~ 149 (165)
T 2c4o_A 95 NINS-NGSICLDILR--SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDR 149 (165)
T ss_dssp TBCT-TCBBCCGGGT--TTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCH
T ss_pred cCCC-CCeEeehhhc--CCCCCcCcHHHHHHHHHHHHhCCCCCccccHHHHHHHHHHH
Confidence 9995 9999999996 89999999999999999999999999999999999998654
No 22
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.6e-42 Score=262.78 Aligned_cols=131 Identities=24% Similarity=0.339 Sum_probs=120.1
Q ss_pred ccchHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEecCCCCCCCCCeEEEecccc
Q 031715 11 VVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRIN 90 (154)
Q Consensus 11 ~~pr~~RL~~El~~l~~~~~~~~~~~~~~~~~~i~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~ 90 (154)
+..+.+||++|+++|++++.++ +.+.+ +++| +++|+++|.||+|||||||+|+|+|.||++||++||+|+|.|+||
T Consensus 28 ~~~~~~RL~kEl~~l~~~~~~g-i~~~p-~~~n--l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~ 103 (179)
T 1i7k_A 28 RGPVGKRLQQELMTLMMSGDKG-ISAFP-ESDN--LFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCY 103 (179)
T ss_dssp --CHHHHHHHHHHHHHHHCCTT-EEEEE-ETTE--EEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSCCC
T ss_pred ChHHHHHHHHHHHHHHhCCCCC-EEEEE-cCCc--ccccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecCCc
Confidence 4557899999999999988888 66664 5566 569999999999999999999999999999999999999999999
Q ss_pred cCceecCCCeEeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCChhhh
Q 031715 91 MTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGPHHMD 148 (154)
Q Consensus 91 HPnv~~~~G~vcl~~l~~~~~W~p~~~i~~vl~~i~~ll~~P~~~~~~~~~~~~~~~~ 148 (154)
||||+. +|+||+++|. ++|+|+++|.+||.+|+++|.+|++++|+|++++.+|.+
T Consensus 104 HPNV~~-~G~ICL~iL~--~~WsP~~ti~~vL~sI~sll~~Pn~~~Pln~~aa~l~~d 158 (179)
T 1i7k_A 104 HPNVDT-QGNISLDILK--EKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKN 158 (179)
T ss_dssp STTBCT-TCBBCCGGGT--TTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHTTS
T ss_pred cCcccc-CCeEEcccCc--CcCCCCCCHHHHHHHHHHHHhCCCCcchhhHHHHHHhhC
Confidence 999996 9999999996 899999999999999999999999999999999999933
No 23
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00 E-value=5.6e-42 Score=254.30 Aligned_cols=129 Identities=22% Similarity=0.393 Sum_probs=120.2
Q ss_pred HHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEecCCCCCCCCCeEEEecccccCce
Q 031715 15 NFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCV 94 (154)
Q Consensus 15 ~~RL~~El~~l~~~~~~~~~~~~~~~~~~i~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~HPnv 94 (154)
.+||++|+++|+++++++ +.+.+ +++| +++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|+||||||
T Consensus 7 ~~RL~kE~~~l~~~~~~~-i~~~~-~~~~--l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 82 (155)
T 1jat_A 7 PKRIIKETEKLVSDPVPG-ITAEP-HDDN--LRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNI 82 (155)
T ss_dssp CHHHHHHHHHHHHSCCTT-EEEEE-ETTE--EEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCCBTTB
T ss_pred HHHHHHHHHHHHhCCCCC-EEEEE-CCCc--hhEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeecccccCCC
Confidence 579999999999998888 66665 4566 5699999999999999999999999999999999999999999999999
Q ss_pred ecCCCeEeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCChhhhhh
Q 031715 95 NHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGPHHMDVY 150 (154)
Q Consensus 95 ~~~~G~vcl~~l~~~~~W~p~~~i~~vl~~i~~ll~~P~~~~~~~~~~~~~~~~~~ 150 (154)
+ .+|.||+++|. ++|+|+++|.+||.+|+++|.+|++++|+|++++.+|+++.
T Consensus 83 ~-~~G~iCl~iL~--~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~ 135 (155)
T 1jat_A 83 D-RLGRICLDVLK--TNWSPALQIRTVLLSIQALLASPNPNDPLANDVAEDWIKNE 135 (155)
T ss_dssp C-TTCCBCCGGGT--TTCCTTCCHHHHHHHHHHHHHSCCTTSTTCCTTHHHHHHCH
T ss_pred C-CCCEEEchhhc--cCCCCCCCHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCH
Confidence 9 59999999996 89999999999999999999999999999999999998654
No 24
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=2.6e-42 Score=264.34 Aligned_cols=133 Identities=25% Similarity=0.409 Sum_probs=119.4
Q ss_pred cchHHHHHHHHHHhHcCCC-------------CCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEecCCCCCC
Q 031715 12 VPRNFRLLEELERGEKGIG-------------DGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPE 78 (154)
Q Consensus 12 ~pr~~RL~~El~~l~~~~~-------------~~~~~~~~~~~~~i~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~ 78 (154)
..+.+||++|+++|+++++ .+ +.+.+ .++| +++|+++|.||++||||||+|+|+|.||++||+
T Consensus 31 ~~a~~RL~kEl~~l~k~~~~~~~~p~~~~~~~~g-i~v~~-~~~n--l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~ 106 (193)
T 2f4z_A 31 PREQARLLKELADIQQLQRAHDSEPAATHSTSHG-VSAQI-VGGD--IHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPY 106 (193)
T ss_dssp -CHHHHHHHHHHHHHHC----------------C-EEEEE-ETTE--EEEEEEEEECCTTSTTTTCEEEEEEECCTTTTT
T ss_pred CHHHHHHHHHHHHHHhCCCccccccccccCCCCc-EEEEE-cCCC--cceEEEEEeCCCCCCcCCCEEEEEEECCCcCCC
Confidence 3467899999999999876 56 66765 4456 569999999999999999999999999999999
Q ss_pred CCCeEEEecccccCceecCCCeEeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCChhhhhh
Q 031715 79 KPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGPHHMDVY 150 (154)
Q Consensus 79 ~pP~v~f~t~i~HPnv~~~~G~vcl~~l~~~~~W~p~~~i~~vl~~i~~ll~~P~~~~~~~~~~~~~~~~~~ 150 (154)
+||+|+|.|+||||||+..+|.||+++|. ++|+|+++|++||++|+++|.+|++++|+|+++|++|+++.
T Consensus 107 ~PP~V~F~T~i~HPNI~~~~G~ICL~iL~--~~WsP~~ti~~vL~sI~sll~~pnp~~P~n~~aa~l~~~d~ 176 (193)
T 2f4z_A 107 NPPKMKFVTKIWHPNISSQTGAICLDILK--HEWSPALTIRTALLSIQAMLADPVPTDPQDAEVAKMMIENH 176 (193)
T ss_dssp SCCEEEESSCCCBTTBCTTTCBBCCGGGT--TTCCTTSCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCH
T ss_pred CCCeEEEecCCccCCCcCCCCEEECcccc--ccCCCCCCHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCH
Confidence 99999999999999999669999999996 88999999999999999999999999999999999998654
No 25
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=4.2e-42 Score=258.33 Aligned_cols=133 Identities=21% Similarity=0.327 Sum_probs=121.6
Q ss_pred chHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEecCCCCCCCCCeEEEecccccC
Q 031715 13 PRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMT 92 (154)
Q Consensus 13 pr~~RL~~El~~l~~~~~~~~~~~~~~~~~~i~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~HP 92 (154)
.+.+||++|+++++++++++ +.+.+ +++|+ ++|+++|.||++||||||+|+|+|.||++||++||+|+|.|+||||
T Consensus 4 ~~~~RL~kEl~~l~~~~~~g-i~~~~-~~~~l--~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 79 (169)
T 1yh2_A 4 QRASRLKRELHMLATEPPPG-ITCWQ-DKDQM--DDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHP 79 (169)
T ss_dssp HHHHHHHHHHHHHHHSCCTT-EEEEE-SSSCT--TEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBT
T ss_pred HHHHHHHHHHHHHHhCCCCC-EEEEe-CCCch--heEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCccc
Confidence 45889999999999998888 66764 66775 4999999999999999999999999999999999999999999999
Q ss_pred ceecCCCeEeccCCCC--CCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCChhhhhh
Q 031715 93 CVNHETGVVEPKKFGL--LVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGPHHMDVY 150 (154)
Q Consensus 93 nv~~~~G~vcl~~l~~--~~~W~p~~~i~~vl~~i~~ll~~P~~~~~~~~~~~~~~~~~~ 150 (154)
||+ .+|.||+++|+. .++|+|+++|.+||.+|+++|.+|++++|+|++|+.+|+++.
T Consensus 80 Nv~-~~G~iCl~iL~~~~~~~W~p~~~i~~vL~si~~ll~~p~~~~p~n~~aa~~~~~~~ 138 (169)
T 1yh2_A 80 NID-SAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPDDPLMADISSEFKYNK 138 (169)
T ss_dssp TBC-TTCBBCCGGGSCTTTSCCCTTSCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCH
T ss_pred cCC-cCCeEecccccCCcccCCCCCCcHHHHHHHHHHHHhCCCCcchHhHHHHHHHHhhH
Confidence 999 599999999852 178999999999999999999999999999999999997654
No 26
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.8e-42 Score=260.39 Aligned_cols=139 Identities=20% Similarity=0.260 Sum_probs=124.7
Q ss_pred CccccchHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEecCCCCCCCCCeEEEec
Q 031715 8 SSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHS 87 (154)
Q Consensus 8 ~~~~~pr~~RL~~El~~l~~~~~~~~~~~~~~~~~~i~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t 87 (154)
.+++.++.+||++|+++|+++++++ +.+.+ .++|+ ++|+++|.||++||||||+|+|+|.||++||++||+|+|.|
T Consensus 18 ~~M~~~a~~RL~kEl~~l~~~~~~g-i~~~p-~~~nl--~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T 93 (169)
T 1yrv_A 18 GSMHGRAYLLLHRDFCDLKENNYKG-ITAKP-VSEDM--MEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFIT 93 (169)
T ss_dssp TGGGCHHHHHHHHHHHHHHHHCCTT-EEEEE-CSTTS--CEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESS
T ss_pred CccChHHHHHHHHHHHHHHhCCCCC-EEEEE-cCCcc--ccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecC
Confidence 4555567899999999999998888 56654 55674 59999999999999999999999999999999999999999
Q ss_pred ccccCceecCCCeEeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCChhhhhh
Q 031715 88 RINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGPHHMDVY 150 (154)
Q Consensus 88 ~i~HPnv~~~~G~vcl~~l~~~~~W~p~~~i~~vl~~i~~ll~~P~~~~~~~~~~~~~~~~~~ 150 (154)
+||||||+..+|.||+++|...++|+|+++|++||.+|+++|.+|++++|+|++||++|+++.
T Consensus 94 ~i~HPNI~~~~G~ICL~iL~~~~~WsP~~ti~~vL~sI~sll~~Pn~~~Pln~eaa~l~~~d~ 156 (169)
T 1yrv_A 94 IPFHPNVDPHTGQPCIDFLDNPEKWNTNYTLSSILLALQVMLSNPVLENPVNLEAARILVKDE 156 (169)
T ss_dssp CCCCTTBCTTTCCBCCHHHHCGGGCCTTCCHHHHHHHHHHHHTSCCTTSCSCHHHHHHHHSCH
T ss_pred CCccCcccCCCCeEeehhhcCCcCCCCcCCHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCH
Confidence 999999943699999999852268999999999999999999999999999999999998654
No 27
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00 E-value=5.9e-42 Score=254.72 Aligned_cols=133 Identities=21% Similarity=0.303 Sum_probs=119.6
Q ss_pred hHHHHHHHHHHhHcCCCCCceEEeecCC----CCCceeEEEEEEECCCCCCCCCcEEEEEEecCCCCCCCCCeEEEeccc
Q 031715 14 RNFRLLEELERGEKGIGDGTVSYGMDDG----DDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRI 89 (154)
Q Consensus 14 r~~RL~~El~~l~~~~~~~~~~~~~~~~----~~i~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i 89 (154)
+.+||++|++++++++++| +.+.+.++ +| +++|+++|.||++||||||+|+++|.||++||++||+|+|.|+|
T Consensus 5 a~~RL~kE~~~l~~~~~~g-~~~~p~~~~~~~~n--l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i 81 (157)
T 2gjd_A 5 CLQRLQEERKKWRKDHPFG-FYAKPVKKADGSMD--LQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPAGF 81 (157)
T ss_dssp HHHHHHHHHHHHHHCCCTT-CEEEEEECTTSCEE--EEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECCTTC
T ss_pred HHHHHHHHHHHHHhCCCCC-EEEEeccccCCCCc--ccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeeccCCC
Confidence 4789999999999999999 44544321 25 67999999999999999999999999999999999999999999
Q ss_pred ccCceecCCCeEeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCChhhhhh
Q 031715 90 NMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGPHHMDVY 150 (154)
Q Consensus 90 ~HPnv~~~~G~vcl~~l~~~~~W~p~~~i~~vl~~i~~ll~~P~~~~~~~~~~~~~~~~~~ 150 (154)
|||||+. +|.||+++|+..++|+|+++|.+||.+|+++|.+|++++|+|++|+.+|+++.
T Consensus 82 ~HPnv~~-~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~ 141 (157)
T 2gjd_A 82 YHPNVYP-SGTICLSILNEDQDWRPAITLKQIVLGVQDLLDSPNPNSPAQEPAWRSFSRNK 141 (157)
T ss_dssp CCTTBCT-TSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHTSCCTTCCCCHHHHHHHHHCH
T ss_pred ccCCCCC-CCcEeeecccCCCCCCCCCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCH
Confidence 9999995 99999999972237999999999999999999999999999999999998654
No 28
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00 E-value=8.9e-42 Score=254.19 Aligned_cols=132 Identities=22% Similarity=0.312 Sum_probs=120.3
Q ss_pred chHHHHHHHHHHhHcC---CCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEecCCCCCCCCCeEEEeccc
Q 031715 13 PRNFRLLEELERGEKG---IGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRI 89 (154)
Q Consensus 13 pr~~RL~~El~~l~~~---~~~~~~~~~~~~~~~i~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i 89 (154)
.+.+||++|+++|+++ +..+ +.+.+ .++| +++|+++|.||++||||||+|+|+|.||++||++||+|+|.|+|
T Consensus 8 ~a~~RL~kEl~~l~~~~~~~~~~-i~~~~-~~~~--l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i 83 (159)
T 2bep_A 8 IAVQRIKREFKEVLKSEETSKNQ-IKVDL-VDEN--FTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKI 83 (159)
T ss_dssp HHHHHHHHHHHHHHHCHHHHTTS-EEEEE-CSSS--SSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCC
T ss_pred HHHHHHHHHHHHHHhcCCCCCCC-EEEEe-CCCc--hheEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeCCC
Confidence 3578999999999985 3556 67776 4456 45999999999999999999999999999999999999999999
Q ss_pred ccCceecCCCeEeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCChhhhhh
Q 031715 90 NMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGPHHMDVY 150 (154)
Q Consensus 90 ~HPnv~~~~G~vcl~~l~~~~~W~p~~~i~~vl~~i~~ll~~P~~~~~~~~~~~~~~~~~~ 150 (154)
|||||++.+|.||+++|. ++|+|+++|.+||.+|+++|.+|++++|+|++++++|+++.
T Consensus 84 ~HPni~~~~G~iCl~iL~--~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~ 142 (159)
T 2bep_A 84 WHPNISSVTGAICLDILK--DQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNP 142 (159)
T ss_dssp CBTTBCTTTCBBCCGGGT--TTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCH
T ss_pred CccCCCCCCCEEeChhhh--ccCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCH
Confidence 999999669999999996 88999999999999999999999999999999999998654
No 29
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00 E-value=7.5e-42 Score=255.10 Aligned_cols=135 Identities=21% Similarity=0.305 Sum_probs=120.2
Q ss_pred chHHHHHHHHHHhHcCCCCCceEEeecC---CCCCceeEEEEEEECCCCCCCCCcEEEEEEecCCCCCCCCCeEEEeccc
Q 031715 13 PRNFRLLEELERGEKGIGDGTVSYGMDD---GDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRI 89 (154)
Q Consensus 13 pr~~RL~~El~~l~~~~~~~~~~~~~~~---~~~i~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i 89 (154)
.+.+||++|+++|++++++|+......+ ++| +++|+++|.||++||||||+|+++|.||++||++||+|+|.|+|
T Consensus 7 ~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~n--l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i 84 (161)
T 2grr_A 7 IALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMN--LMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPL 84 (161)
T ss_dssp HHHHHHHHHHHHHHHSCCTTCEEEEEECTTSCEE--EEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCC
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCC--ccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEecCc
Confidence 4578999999999999988854333221 235 67999999999999999999999999999999999999999999
Q ss_pred ccCceecCCCeEeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCChhhhhh
Q 031715 90 NMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGPHHMDVY 150 (154)
Q Consensus 90 ~HPnv~~~~G~vcl~~l~~~~~W~p~~~i~~vl~~i~~ll~~P~~~~~~~~~~~~~~~~~~ 150 (154)
|||||+. +|.||+++|...++|+|+++|.+||.+|+++|.+|++++|+|++|+.+|+++.
T Consensus 85 ~HPnv~~-~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~ 144 (161)
T 2grr_A 85 FHPNVYP-SGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQSPAQAEAYTIYCQNR 144 (161)
T ss_dssp CSTTBCT-TSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCH
T ss_pred ccCCCCC-CCeEeehhcCCCCCcCCCCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCH
Confidence 9999995 99999999972248999999999999999999999999999999999998654
No 30
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00 E-value=5.1e-42 Score=266.68 Aligned_cols=132 Identities=20% Similarity=0.357 Sum_probs=122.4
Q ss_pred chHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEecCCCCCCCCCeEEEecccccC
Q 031715 13 PRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMT 92 (154)
Q Consensus 13 pr~~RL~~El~~l~~~~~~~~~~~~~~~~~~i~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~HP 92 (154)
.+.+||++|+++|+++++++ +.+.+ .++|+ ++|+++|.||++||||||+|+|+|.||++||++||+|+|.|+||||
T Consensus 23 ~a~~RL~kEl~~l~~~~~~g-i~~~p-~~~nl--~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HP 98 (216)
T 2pwq_A 23 KELLRLQKELKDIENENVQE-IDAHI-KDSNF--FEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTKIWHP 98 (216)
T ss_dssp HHHHHHHHHHHHHHHSCTTT-EEEEE-CSSCT--TEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBT
T ss_pred HHHHHHHHHHHHHHhCCCCC-EEEEE-cCCcc--ceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCCCcCC
Confidence 46899999999999999888 67776 45674 5999999999999999999999999999999999999999999999
Q ss_pred ceecCCCeEeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCChhhhhh
Q 031715 93 CVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGPHHMDVY 150 (154)
Q Consensus 93 nv~~~~G~vcl~~l~~~~~W~p~~~i~~vl~~i~~ll~~P~~~~~~~~~~~~~~~~~~ 150 (154)
||+..+|.||+++|. ++|+|+++|.+||++|+++|.+|++++|+|+++|++|+++.
T Consensus 99 NI~~~~G~ICL~iL~--~~WsP~~ti~~VL~sI~sLL~~Pnp~dPln~eaa~~~~~d~ 154 (216)
T 2pwq_A 99 NISSQTGAICLDVLK--NEWSPALTIRTALLSIQALLSDPQPDDPQDAEVAKMYKENH 154 (216)
T ss_dssp TBCTTTCBBCCHHHH--HHCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCH
T ss_pred CCcCCCCEEEchhhc--ccCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCH
Confidence 999668999999986 88999999999999999999999999999999999998654
No 31
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00 E-value=1.4e-41 Score=260.45 Aligned_cols=131 Identities=26% Similarity=0.405 Sum_probs=121.7
Q ss_pred chHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEecCCCCCCCCCeEEEecccccC
Q 031715 13 PRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMT 92 (154)
Q Consensus 13 pr~~RL~~El~~l~~~~~~~~~~~~~~~~~~i~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~HP 92 (154)
.+.+||++|+++|+++++++ +.+.+ +++|+ ++|+++|.||+|||||||+|+|+|.||++||++||+|+|.|+||||
T Consensus 48 ~a~~RL~kEl~~l~~~~~~g-i~~~p-~~~nl--~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HP 123 (194)
T 3bzh_A 48 TSAKRIQKELADITLDPPPN-CSAGP-KGDNI--YEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHC 123 (194)
T ss_dssp HHHHHHHHHHHHHHHSCCTT-EEEEE-SSSCT--TEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBT
T ss_pred HHHHHHHHHHHHHHhCCCCC-ceeec-ccCcc--ccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCCCccc
Confidence 36899999999999998888 66765 56775 4999999999999999999999999999999999999999999999
Q ss_pred ceecCCCeEeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCChhhhhh
Q 031715 93 CVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGPHHMDVY 150 (154)
Q Consensus 93 nv~~~~G~vcl~~l~~~~~W~p~~~i~~vl~~i~~ll~~P~~~~~~~~~~~~~~~~~~ 150 (154)
||+. +|.||+++|. ++|+|+++|.+||++|+++|.+|++++|+|++++.+|+++.
T Consensus 124 NV~~-~G~ICL~iL~--~~WsP~~ti~~vL~sI~~ll~~pnp~~Pln~~aa~l~~~d~ 178 (194)
T 3bzh_A 124 NINS-QGVICLDILK--DNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNR 178 (194)
T ss_dssp TBCT-TCBBCCGGGT--TTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCH
T ss_pred eECC-CCceechhhh--ccCCCcCcHHHHHHHHHHHHhCCCCccchhHHHHHHHHHCH
Confidence 9996 9999999996 89999999999999999999999999999999999998654
No 32
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.6e-41 Score=253.19 Aligned_cols=129 Identities=14% Similarity=0.286 Sum_probs=118.6
Q ss_pred chHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEecCCCCCCCCCeEEEecccccC
Q 031715 13 PRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMT 92 (154)
Q Consensus 13 pr~~RL~~El~~l~~~~~~~~~~~~~~~~~~i~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~HP 92 (154)
.+.+||++|++++ +++++ +.+.+++++|++ +|+++| ||++||||||+|+++|.||++||++||+|+|.|+||||
T Consensus 6 ~~~~RL~kEl~~l--~~~~~-~~~~~~~~~~l~--~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 79 (160)
T 1y8x_A 6 AAQLRIQKDINEL--NLPKT-CDISFSDPDDLL--NFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHP 79 (160)
T ss_dssp HHHHHHHHHHHTC--CCCTT-EEEECSSTTCTT--EEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCCCBT
T ss_pred HHHHHHHHHHHhc--CCCCC-eEEEeccCCccc--eEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCCccC
Confidence 4689999999999 35567 777766778854 999988 99999999999999999999999999999999999999
Q ss_pred ceecCCCeEeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCChhhhhh
Q 031715 93 CVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGPHHMDVY 150 (154)
Q Consensus 93 nv~~~~G~vcl~~l~~~~~W~p~~~i~~vl~~i~~ll~~P~~~~~~~~~~~~~~~~~~ 150 (154)
||+. +|.||+++|+ ++|+|+++|.+||.+|+++|.+|++++|+|++|+++|+++.
T Consensus 80 nv~~-~G~iCl~iL~--~~W~p~~~i~~vL~~i~~ll~~Pn~~~p~n~~aa~~~~~~~ 134 (160)
T 1y8x_A 80 NIDL-EGNVCLNILR--EDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNR 134 (160)
T ss_dssp TBCT-TCBBCCGGGT--TTCCTTCCHHHHHHHHHHHHHSCCCSSCSCHHHHHHHHSCH
T ss_pred cCCC-CCeEEcccch--hhccCCCCHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCH
Confidence 9996 8999999996 89999999999999999999999999999999999998654
No 33
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=100.00 E-value=2.6e-42 Score=268.19 Aligned_cols=132 Identities=19% Similarity=0.361 Sum_probs=122.3
Q ss_pred hHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEecCCCCCCCCCeEEEecccccCc
Q 031715 14 RNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTC 93 (154)
Q Consensus 14 r~~RL~~El~~l~~~~~~~~~~~~~~~~~~i~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~HPn 93 (154)
+.+||++|+++++++++++ +.+.+.++++ +++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+|||||
T Consensus 3 a~~RL~kEl~~l~~~~~~g-i~~~p~~~~~--l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPN 79 (215)
T 1tte_A 3 RAKRIMKEIQAVKDDPAAH-ITLEFVSESD--IHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPN 79 (215)
T ss_dssp THHHHHHHHHHHHTTTCTT-CEECCCSSSS--CCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCCCSS
T ss_pred HHHHHHHHHHHHHhCCCCC-EEEEECCCcc--ccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCccCc
Confidence 5789999999999998888 6777655555 459999999999999999999999999999999999999999999999
Q ss_pred eecCCCeEeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCChhhhhh
Q 031715 94 VNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGPHHMDVY 150 (154)
Q Consensus 94 v~~~~G~vcl~~l~~~~~W~p~~~i~~vl~~i~~ll~~P~~~~~~~~~~~~~~~~~~ 150 (154)
|+..+|.||+++|. ++|+|+++|.+||.+|+++|.+|++++|.|++++.+|+++.
T Consensus 80 I~~~~G~ICL~iL~--~~WsP~~ti~~VL~sI~sLL~~Pnp~~Pln~eaa~~~~~d~ 134 (215)
T 1tte_A 80 ISSVTGAICLDILR--NAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDR 134 (215)
T ss_dssp SCSSSSCCCSSTTT--CCSCTTCCHHHHHHHHHHHHTSCCCSSCSCHHHHHHHHHCH
T ss_pred CcCCCCEEECccCC--CCCCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCH
Confidence 99659999999996 89999999999999999999999999999999999998654
No 34
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.6e-41 Score=256.29 Aligned_cols=132 Identities=14% Similarity=0.280 Sum_probs=120.7
Q ss_pred cccchHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEecCCCCCCCCCeEEEeccc
Q 031715 10 VVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRI 89 (154)
Q Consensus 10 ~~~pr~~RL~~El~~l~~~~~~~~~~~~~~~~~~i~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i 89 (154)
.+.++.+||++|++++ +++++ +.+.+++++|++ +|+++| ||++||||||+|+++|.||++||++||+|+|.|+|
T Consensus 23 ~~~~~~~RL~kEl~~l--~~~~~-i~~~~p~~~nl~--~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~i 96 (180)
T 2nvu_C 23 KASAAQLRIQKDINEL--NLPKT-CDISFSDPDDLL--NFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMV 96 (180)
T ss_dssp SCCHHHHHHHHHHHTC--CCCTT-EEEECSSTTCTT--EEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSCC
T ss_pred CccHHHHHHHHHHHhc--CCCCC-eEEEeccccccc--ceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceeccC
Confidence 3445789999999999 45667 777766788855 999988 99999999999999999999999999999999999
Q ss_pred ccCceecCCCeEeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCChhhhhh
Q 031715 90 NMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGPHHMDVY 150 (154)
Q Consensus 90 ~HPnv~~~~G~vcl~~l~~~~~W~p~~~i~~vl~~i~~ll~~P~~~~~~~~~~~~~~~~~~ 150 (154)
|||||+. +|.||+++|. ++|+|+++|.+||.+|+++|.+|++++|+|++++.+|+++.
T Consensus 97 ~HPNV~~-~G~iCl~iL~--~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~d~ 154 (180)
T 2nvu_C 97 YHPNIDL-EGNVALNILR--EDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNR 154 (180)
T ss_dssp CBTTBCT-TSBBCCGGGT--TSCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCH
T ss_pred ccCCCCC-CCcEEccccc--ccCCCCCCHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCH
Confidence 9999996 9999999996 89999999999999999999999999999999999998654
No 35
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=100.00 E-value=2.4e-41 Score=250.83 Aligned_cols=131 Identities=18% Similarity=0.299 Sum_probs=120.7
Q ss_pred hHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEecCCCCCCCCCeEEEecccccCc
Q 031715 14 RNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTC 93 (154)
Q Consensus 14 r~~RL~~El~~l~~~~~~~~~~~~~~~~~~i~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~HPn 93 (154)
+.+||++|+++++++++++ +.+..++++|++ +|+++|. |++||||||+|+++|.||++||++||+|+|.|+|||||
T Consensus 5 ~~~RL~kEl~~l~~~~~~~-i~~~~~~~~~l~--~w~~~I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 80 (155)
T 1wzv_A 5 ASMRVVKELEDLQKKPPPY-LRNLSSDDANVL--VWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPN 80 (155)
T ss_dssp CHHHHHHHHHHHHHSCCTT-EEEEEECSSCTT--EEEEEEC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCCBTT
T ss_pred HHHHHHHHHHHHHhCCCCC-EEEEecCCCchh--eEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCccCc
Confidence 4789999999999999888 666445777854 9999999 99999999999999999999999999999999999999
Q ss_pred eecCCCeEeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCChhhhhh
Q 031715 94 VNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGPHHMDVY 150 (154)
Q Consensus 94 v~~~~G~vcl~~l~~~~~W~p~~~i~~vl~~i~~ll~~P~~~~~~~~~~~~~~~~~~ 150 (154)
|+. +|.||+++|+ .++|+|+++|.+||.+|+++|.+|++++|+|++++.+|+++.
T Consensus 81 V~~-~G~iCl~iL~-~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~ 135 (155)
T 1wzv_A 81 VDE-NGQICLPIIS-SENWKPCTKTCQVLEALNVLVNRPNIREPLRMDLADLLTQNP 135 (155)
T ss_dssp BCT-TCBCCCGGGC-TTTCCTTCCHHHHHHHHHHHHHSCCSSSCSSHHHHHHHHHCH
T ss_pred CCC-CCeEeecCCC-ccCCCCCCcHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHH
Confidence 996 9999999993 489999999999999999999999999999999999998654
No 36
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=100.00 E-value=6.8e-41 Score=252.38 Aligned_cols=133 Identities=19% Similarity=0.238 Sum_probs=118.0
Q ss_pred chHHHHHHHHHHhHc-C-C------CC-C-ceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEecCCCCCCCCCe
Q 031715 13 PRNFRLLEELERGEK-G-I------GD-G-TVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPS 82 (154)
Q Consensus 13 pr~~RL~~El~~l~~-~-~------~~-~-~~~~~~~~~~~i~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~ 82 (154)
.+.+||++|+++|++ . + +. | .+.+...+++|++ +|+++|.||++||||||+|+|+|.||++||++||+
T Consensus 6 ~~~~RL~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~~nl~--~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~ 83 (172)
T 2y9m_A 6 TCMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDETDLS--KWEAIISGPSDTPYENHQFRILIEVPSSYPMNPPK 83 (172)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCTTTCTTTTTEEEEEESSTTCTT--EEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCE
T ss_pred HHHHHHHHHHHHHHhccCCcccccCCCCcceEEEecCCCCchh--EEEEEEECCCCCcccCCEEEEEEECCCcCCCCCCE
Confidence 457899999999998 4 2 22 2 2334433677854 99999999999999999999999999999999999
Q ss_pred EEEec-ccccCceecCCCeEeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCChhhh
Q 031715 83 VRFHS-RINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGPHHMD 148 (154)
Q Consensus 83 v~f~t-~i~HPnv~~~~G~vcl~~l~~~~~W~p~~~i~~vl~~i~~ll~~P~~~~~~~~~~~~~~~~ 148 (154)
|+|.| +||||||+..+|.||+++|. .++|+|+++|.+||.+|+++|.+|++++|+|++++++|++
T Consensus 84 v~f~t~~i~HPni~~~~G~iCl~iL~-~~~W~p~~~i~~vL~si~~ll~~p~~~~p~n~~aa~~~~~ 149 (172)
T 2y9m_A 84 ISFMQNNILHCNVKSATGEICLNILK-PEEWTPVWDLLHCVHAVWRLLREPVCDSPLDVDIGNIIRC 149 (172)
T ss_dssp EEECTTSCCCTTEETTTTEECCGGGS-TTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHTT
T ss_pred EEEeeCCeecCCCcCCCCEEeccccC-CCCCCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHh
Confidence 99999 99999997569999999984 4799999999999999999999999999999999999987
No 37
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00 E-value=5e-41 Score=258.66 Aligned_cols=131 Identities=22% Similarity=0.317 Sum_probs=119.8
Q ss_pred hHHHHHHHHHHhHcCC---CCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEecCCCCCCCCCeEEEecccc
Q 031715 14 RNFRLLEELERGEKGI---GDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRIN 90 (154)
Q Consensus 14 r~~RL~~El~~l~~~~---~~~~~~~~~~~~~~i~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~ 90 (154)
..+||++|+++++++. +.+ +.+.+ .++|+ ++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+||
T Consensus 6 a~~Rl~kEl~~l~~~~~~~~~~-i~~~~-~~~nl--~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~ 81 (201)
T 3k9o_A 6 AVQRIKREFKEVLKSEETSKNQ-IKVDL-VDENF--TELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIW 81 (201)
T ss_dssp THHHHHHHHHHHHTCHHHHTTS-EEEEE-CSTTS--SEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCC
T ss_pred HHHHHHHHHHHHHhCCCCCCCC-EEEEE-CCCCc--cEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccccCcc
Confidence 4789999999999863 456 66765 45674 59999999999999999999999999999999999999999999
Q ss_pred cCceecCCCeEeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCChhhhhh
Q 031715 91 MTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGPHHMDVY 150 (154)
Q Consensus 91 HPnv~~~~G~vcl~~l~~~~~W~p~~~i~~vl~~i~~ll~~P~~~~~~~~~~~~~~~~~~ 150 (154)
||||++.+|.||+++|. ++|+|+++|.+||.+|+++|.+|++++|+|++++++|+++.
T Consensus 82 HPnv~~~~G~iCl~iL~--~~W~p~~~i~~vL~~i~~ll~~p~p~~p~n~~aa~~~~~~~ 139 (201)
T 3k9o_A 82 HPNISSVTGAICLDILK--DQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNP 139 (201)
T ss_dssp BTTBCTTTCBBCCGGGT--TTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCH
T ss_pred cCCCcCCCCeeeCcccc--cCCCCCCCHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHCH
Confidence 99999669999999996 89999999999999999999999999999999999998654
No 38
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=100.00 E-value=7.5e-41 Score=247.96 Aligned_cols=131 Identities=19% Similarity=0.330 Sum_probs=118.8
Q ss_pred hHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEecCCCCCCCCCeEEEecccccCc
Q 031715 14 RNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTC 93 (154)
Q Consensus 14 r~~RL~~El~~l~~~~~~~~~~~~~~~~~~i~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~HPn 93 (154)
+.+||++|+++++++++++ +.+..++++|+ ++|+++|. |++||||||+|+|+|.||++||++||+|+|.|+|||||
T Consensus 3 a~~RL~kEl~~l~~~~~~~-~~~~~~~~~~l--~~w~~~i~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 78 (154)
T 1c4z_D 3 ASRRLMKELEEIRKCGMKN-FRNIQVDEANL--LTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPN 78 (154)
T ss_dssp -CTTHHHHHTTCSSSCCSS-CEEECSSCSSS--SEEEEEEC-CCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCCTT
T ss_pred HHHHHHHHHHHHHhCCCCC-EEEeeCCCCch--heEEEEEe-CCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCcccc
Confidence 3579999999999999888 44444466775 59999998 99999999999999999999999999999999999999
Q ss_pred eecCCCeEeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCChhhhhh
Q 031715 94 VNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGPHHMDVY 150 (154)
Q Consensus 94 v~~~~G~vcl~~l~~~~~W~p~~~i~~vl~~i~~ll~~P~~~~~~~~~~~~~~~~~~ 150 (154)
|+. +|.||+++|. .++|+|+++|.+||.+|+++|.+|++++|+|++++.+|+++.
T Consensus 79 v~~-~G~iCl~iL~-~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~ 133 (154)
T 1c4z_D 79 IDE-KGQVCLPVIS-AENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDR 133 (154)
T ss_dssp BCT-TCBBCCTTTS-SSSCCTTCCHHHHHHHHHHHHHSCCCSSCSCHHHHHHHHTCS
T ss_pred CCC-CCEEECCCCC-CCCCCCCCcHHHHHHHHHHHHcCCCCCchhhHHHHHHHHHhH
Confidence 995 9999999984 478999999999999999999999999999999999998654
No 39
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=100.00 E-value=3.1e-40 Score=261.81 Aligned_cols=134 Identities=22% Similarity=0.301 Sum_probs=121.5
Q ss_pred ccchHHHHHHHHHHhHcC---CCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEecCCCCCCCCCeEEEec
Q 031715 11 VVPRNFRLLEELERGEKG---IGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHS 87 (154)
Q Consensus 11 ~~pr~~RL~~El~~l~~~---~~~~~~~~~~~~~~~i~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t 87 (154)
+....+||++|+++|+++ ++.+ +.+.+ .++|+ ++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|
T Consensus 55 s~~a~~RL~kEl~~l~~~~~~~~~g-i~v~p-~~dnl--~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T 130 (253)
T 3e46_A 55 ANIAVQRIKREFKEVLKSEETSKNQ-IKVDL-VDENF--TELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFIT 130 (253)
T ss_dssp CHHHHHHHHHHHHHHHHCHHHHTTS-EEEEE-CSTTS--SEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESS
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCCC-EEEEE-CCCcc--cEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeecC
Confidence 445689999999999886 3456 66765 45674 59999999999999999999999999999999999999999
Q ss_pred ccccCceecCCCeEeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCChhhhhh
Q 031715 88 RINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGPHHMDVY 150 (154)
Q Consensus 88 ~i~HPnv~~~~G~vcl~~l~~~~~W~p~~~i~~vl~~i~~ll~~P~~~~~~~~~~~~~~~~~~ 150 (154)
+||||||+..+|.||+++|. ++|+|+++|.+||++|+++|.+|++++|+|++++.+|+++.
T Consensus 131 ~i~HPNV~~~~G~ICL~iL~--~~WsP~~ti~~vL~sI~~ll~~pnp~~Pln~eaa~l~~~d~ 191 (253)
T 3e46_A 131 KIWHPNISSVTGAICLDILK--DQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNP 191 (253)
T ss_dssp CCCBTTBCTTTCBBCCGGGT--TCCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCH
T ss_pred CCccCCccCCCCeeeccccc--CCCCCCCCHHHHHHHHHHHhcCCCCCChhhHHHHHHHHHCH
Confidence 99999999669999999996 99999999999999999999999999999999999998654
No 40
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=100.00 E-value=1.2e-39 Score=233.94 Aligned_cols=115 Identities=23% Similarity=0.424 Sum_probs=101.4
Q ss_pred HHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEecCCCCCCCCCeEEEeccc-ccCc
Q 031715 15 NFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRI-NMTC 93 (154)
Q Consensus 15 ~~RL~~El~~l~~~~~~~~~~~~~~~~~~i~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i-~HPn 93 (154)
.+||++|+++++++++++ +.+.+ +++|+ ++|+++|.||++||||||.|+++|.||++||++||+|+|.|++ ||||
T Consensus 8 ~~RL~kEl~~l~~~~~~~-~~~~~-~~~~l--~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPn 83 (125)
T 2fo3_A 8 NYRIQKELHNFLNNPPIN-CTLDV-HPNNI--RIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPKHTH 83 (125)
T ss_dssp -CHHHHHHHHHHHSCCTT-EEEEE-CTTCT--TEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCBTT
T ss_pred HHHHHHHHHHHHhCCCCC-EEEEe-Ccchh--hhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCCCCCc
Confidence 579999999999998888 66765 66775 4999999999999999999999999999999999999999997 9999
Q ss_pred eecCCCeEeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCC
Q 031715 94 VNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRK 136 (154)
Q Consensus 94 v~~~~G~vcl~~l~~~~~W~p~~~i~~vl~~i~~ll~~P~~~~ 136 (154)
|+. +|+||+++|. ++|+|+++|++||.+|+++|.+|+.++
T Consensus 84 v~~-~G~iCl~iL~--~~W~P~~~i~~vl~si~~ll~~p~~~~ 123 (125)
T 2fo3_A 84 VYS-NGDICLSLLG--DDYNPSLSISGLVLSIISMLSSAKEKK 123 (125)
T ss_dssp BCT-TSBBCCGGGT--TTCCTTCCHHHHHHHHHHHHC------
T ss_pred CCC-CCEEEchhcC--CCCCCCCcHHHHHHHHHHHHhCccccc
Confidence 995 9999999996 899999999999999999999999865
No 41
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=5.9e-39 Score=233.48 Aligned_cols=114 Identities=21% Similarity=0.403 Sum_probs=106.0
Q ss_pred hHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEecCCCCCCCCCeEEEeccc-ccC
Q 031715 14 RNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRI-NMT 92 (154)
Q Consensus 14 r~~RL~~El~~l~~~~~~~~~~~~~~~~~~i~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i-~HP 92 (154)
+.+||++|+++++++++++ +.+.+ +++|+ ++|+++|.||++||||||.|+++|.||++||++||+|+|.|++ |||
T Consensus 21 ~~~RL~kEl~~l~~~~~~~-~~~~~-~~~nl--~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HP 96 (136)
T 2h2y_A 21 ANYRIQKELNNFLKNPPIN-CTIDV-HPSNI--RIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKPPKHT 96 (136)
T ss_dssp HHHHHHHHHHHHHHSCCTT-EEEEE-CTTCT--TEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCCT
T ss_pred HHHHHHHHHHHHHhCCCCC-eEEEe-ccccc--cccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCC
Confidence 5789999999999999888 66765 56775 4999999999999999999999999999999999999999997 999
Q ss_pred ceecCCCeEeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCC
Q 031715 93 CVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHN 134 (154)
Q Consensus 93 nv~~~~G~vcl~~l~~~~~W~p~~~i~~vl~~i~~ll~~P~~ 134 (154)
||+. +|+||+++|. ++|+|+++|++||.+|+++|.+|+.
T Consensus 97 nv~~-~G~ICl~iL~--~~WsP~~ti~~vL~si~sll~~p~~ 135 (136)
T 2h2y_A 97 HVYS-NGDICLSVLG--DDYNPSLSISGLILSIISMLSSAKE 135 (136)
T ss_dssp TBCT-TCCBCCGGGT--TTCCTTCCHHHHHHHHHHHHSSSCC
T ss_pred cCCC-CCEEECcccc--CCCCCCCcHHHHHHHHHHHHhCcCc
Confidence 9995 9999999996 8999999999999999999999985
No 42
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=100.00 E-value=1.1e-40 Score=246.70 Aligned_cols=127 Identities=17% Similarity=0.311 Sum_probs=115.0
Q ss_pred HHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEecCCCCCCCCCeEEEecccccCce
Q 031715 15 NFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCV 94 (154)
Q Consensus 15 ~~RL~~El~~l~~~~~~~~~~~~~~~~~~i~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~HPnv 94 (154)
.+||++|+++++++ + +.+.+ .++| +++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+||||||
T Consensus 4 ~~Rl~kEl~~l~~~---~-~~v~~-~~~~--l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni 76 (152)
T 2onu_A 4 LTRKQCDFTKLIMA---G-YDLEL-NNGS--TQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLHPNV 76 (152)
T ss_dssp CCHHHHTHHHHHHH---T-CCEEE-ETTE--EEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTB
T ss_pred HHHHHHHHHhcCcC---C-CEEEE-ccCc--cceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCccCcC
Confidence 46999999999884 4 44554 4566 5699999999999999999999999999999999999999999999999
Q ss_pred ecCCCeEeccCCCCCCCCCCCCCHHHHHHH-HHHHhcCCCCCCCCCCCCCChhhhhh
Q 031715 95 NHETGVVEPKKFGLLVNWQREYTMEDILTQ-LKKEMAAPHNRKLVQPPEGPHHMDVY 150 (154)
Q Consensus 95 ~~~~G~vcl~~l~~~~~W~p~~~i~~vl~~-i~~ll~~P~~~~~~~~~~~~~~~~~~ 150 (154)
+..+|.||+++|. ++|+|+++|.+||.+ |++||.+|++++|+|++|+.+|+++.
T Consensus 77 ~~~~G~iCl~il~--~~W~p~~~i~~vl~~ii~~Ll~~Pn~~~P~n~~aa~~~~~d~ 131 (152)
T 2onu_A 77 DEASGSVCLDVIN--QTWTPLYSLVNVFEVFLPQLLTYPNPSDPLNSDAASLLMKDK 131 (152)
T ss_dssp CTTTCBBCHHHHH--HHCCTTCCHHHHHHTHHHHHHHSCCCSSCSSHHHHHHHHHCH
T ss_pred cCcCCeEeccccc--ccCCCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCH
Confidence 9659999999986 889999999999999 68999999999999999999998654
No 43
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=100.00 E-value=1.5e-39 Score=248.56 Aligned_cols=135 Identities=16% Similarity=0.194 Sum_probs=120.0
Q ss_pred ccccchHHHHHHHHHHhHcCCCCCceEEee---cCCCCCcee-EEEEEEECCCCCCCCCcEEEEEEecCCCCCCCCCeEE
Q 031715 9 SVVVPRNFRLLEELERGEKGIGDGTVSYGM---DDGDDIYMR-SWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVR 84 (154)
Q Consensus 9 ~~~~pr~~RL~~El~~l~~~~~~~~~~~~~---~~~~~i~l~-~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~ 84 (154)
....+..+||++|+++++ .+++ +.+.. ++++|+++. +|+++|. |++|||+||+|+++|.||++||++||+|+
T Consensus 25 ~~~s~a~~RL~kEl~~l~--~~~~-i~~~~~~~p~~~nl~~~~~w~~~I~-p~~tpyegg~f~~~i~fp~~YP~~PP~v~ 100 (190)
T 3o2u_A 25 PNLSAARIRLKRDLDSLD--LPPT-VTLNVITSPDSADRSQSPKLEVIVR-PDEGYYNYGSINFNLDFNEVYPIEPPKVV 100 (190)
T ss_dssp CCCCHHHHHHHHHHHTCC--CCTT-EEEEEEECTTCCCTTSCCEEEEEEC-CSSSTTTTCCEEEEEECCTTTTTSCCEEE
T ss_pred CCccHHHHHHHHHHHhcc--CCCC-EEEEecCCCCCccCCcCCeEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCceeE
Confidence 333456899999999998 4566 66663 677884222 9999997 88899999999999999999999999999
Q ss_pred EecccccCceecCCCeEeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCChhhhhh
Q 031715 85 FHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGPHHMDVY 150 (154)
Q Consensus 85 f~t~i~HPnv~~~~G~vcl~~l~~~~~W~p~~~i~~vl~~i~~ll~~P~~~~~~~~~~~~~~~~~~ 150 (154)
|.|+||||||+. +|.||+++|. ++|+|+++|++||.+|+++|.+|++++|+|++|+.+|+++.
T Consensus 101 f~t~i~HPnV~~-~G~iCl~iL~--~~W~p~~~i~~vL~~i~~ll~~pn~~~pln~~aa~~~~~d~ 163 (190)
T 3o2u_A 101 CLKKIFHPNIDL-KGNVCLNILR--EDWSPALDLQSIITGLLFLFLEPNPNDPLNKDAAKLLCEGE 163 (190)
T ss_dssp ECSCCCCTTBCT-TSBBCCGGGT--TTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHTCH
T ss_pred EecCcccCCCCC-CCeEechhcc--CCCCCCCCHHHHHHHHHHHHhCCCCCcchhHHHHHHHHHCH
Confidence 999999999995 9999999997 99999999999999999999999999999999999998654
No 44
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=100.00 E-value=2.4e-40 Score=249.22 Aligned_cols=128 Identities=20% Similarity=0.240 Sum_probs=115.5
Q ss_pred chHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEecCCCCCCCCCeEEEecccccC
Q 031715 13 PRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMT 92 (154)
Q Consensus 13 pr~~RL~~El~~l~~~~~~~~~~~~~~~~~~i~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~HP 92 (154)
.+.+||++|++++++++. + +. .++|+ ++|+++|.||++||||||+|+|+|.||++||++||+|+|.|+||||
T Consensus 12 ~~~~RL~~El~~l~~~~~-~---v~--~~~~l--~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~HP 83 (171)
T 1yf9_A 12 RSNRRREMDYMRLCNSTR-K---VY--PSDTV--AEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILHP 83 (171)
T ss_dssp -CCHHHHHHHHHHHSSSS-C---EE--ECSST--TEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBT
T ss_pred cHHHHHHHHHHHHHhCCC-C---CC--CCCCc--eEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCcccc
Confidence 457899999999999773 3 22 35674 4999999999999999999999999999999999999999999999
Q ss_pred ceecCCCeEeccCCCCCCCCCCCCCHHHHHHHH-HHHhcCCCCCCCCCCCCCChhhhhh
Q 031715 93 CVNHETGVVEPKKFGLLVNWQREYTMEDILTQL-KKEMAAPHNRKLVQPPEGPHHMDVY 150 (154)
Q Consensus 93 nv~~~~G~vcl~~l~~~~~W~p~~~i~~vl~~i-~~ll~~P~~~~~~~~~~~~~~~~~~ 150 (154)
||+..+|.||+++|. ++|+|+++|.+||++| +.+|.+|++++|+|++++.+|+++.
T Consensus 84 Ni~~~~G~iCl~iL~--~~W~p~~~i~~vL~sil~~ll~~Pn~~~p~n~~aa~~~~~d~ 140 (171)
T 1yf9_A 84 NVDERSGSVCLDVIN--QTWTPMYQLENIFDVFLPQLLRYPNPSDPLNVQAAHLLHADR 140 (171)
T ss_dssp TBCTTTCBBCHHHHH--HHCCTTCCTHHHHHTHHHHHHHSCCSSCCSCHHHHHHHHHCH
T ss_pred cCcccCCeEeccccc--cCCCCCCcHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCH
Confidence 999559999999986 8999999999999997 7999999999999999999997654
No 45
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=100.00 E-value=4.6e-40 Score=249.11 Aligned_cols=127 Identities=17% Similarity=0.287 Sum_probs=115.7
Q ss_pred hHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEecCCCCCCCCCeEEEecccccCc
Q 031715 14 RNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTC 93 (154)
Q Consensus 14 r~~RL~~El~~l~~~~~~~~~~~~~~~~~~i~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~HPn 93 (154)
+.+||++|+++|++ ++ +.+.+. +|+ ++|+++|.||++||||||+|+|+|.||++||++||+|+|.|+|||||
T Consensus 26 a~~RL~kEl~~l~~---~g-~~v~~~--ddl--~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~i~HPN 97 (179)
T 2z5d_A 26 GKRRMDTDVIKLIE---SK-HEVTIL--GGL--NEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPN 97 (179)
T ss_dssp HHHHHHHHHHHHHH---SS-SCEEEE--EET--TEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTT
T ss_pred HHHHHHHHHHhcCc---CC-CEEEEC--CCC--ceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecCCccCc
Confidence 58899999999986 34 455553 454 49999999999999999999999999999999999999999999999
Q ss_pred eecCCCeEeccCCCCCCCCCCCCCHHHHHHH-HHHHhcCCCCCCCCCCCCCChhhhhh
Q 031715 94 VNHETGVVEPKKFGLLVNWQREYTMEDILTQ-LKKEMAAPHNRKLVQPPEGPHHMDVY 150 (154)
Q Consensus 94 v~~~~G~vcl~~l~~~~~W~p~~~i~~vl~~-i~~ll~~P~~~~~~~~~~~~~~~~~~ 150 (154)
|+..+|.||+++|. ++|+|+++|.+||.+ |+++|.+|++++|+|++++++|+++.
T Consensus 98 V~~~~G~ICL~iL~--~~WsP~~ti~~iL~s~I~~Ll~~Pn~~~p~n~eaa~~~~~d~ 153 (179)
T 2z5d_A 98 IDEASGTVCLDVIN--QTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRP 153 (179)
T ss_dssp BCTTTCBBCHHHHH--HHCCTTCCTTHHHHTHHHHHHHSCCCSSCSCHHHHHHHHHCH
T ss_pred CCCCCCeEeccccc--cCCCCCCCHHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCH
Confidence 99559999999986 899999999999999 99999999999999999999998654
No 46
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=9.9e-38 Score=227.02 Aligned_cols=110 Identities=18% Similarity=0.292 Sum_probs=100.8
Q ss_pred HHHHHHHHHHhHcCCCCCceEEe-ecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEecCCCCCCCCCeEEEecccc--c
Q 031715 15 NFRLLEELERGEKGIGDGTVSYG-MDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRIN--M 91 (154)
Q Consensus 15 ~~RL~~El~~l~~~~~~~~~~~~-~~~~~~i~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~--H 91 (154)
.+||++|+++++++++++ +.+. .++++| +++|+++|.||+|||||||.|+++|.||++||++||+|+|.|++| |
T Consensus 24 ~~RL~kEl~~l~~~~~~g-i~v~~~~~~~n--l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~~~H 100 (136)
T 2a7l_A 24 QKRLQKELLALQNDPPPG-MTLNEKSVQNS--ITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVH 100 (136)
T ss_dssp CHHHHHHHHHHHHSCCTT-CCCCTTCCCCS--CEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESSCCCCB
T ss_pred HHHHHHHHHHHHhCCCCC-EEEEEeeCccc--cceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCCCcCCC
Confidence 489999999999999888 4443 246677 459999999999999999999999999999999999999999999 9
Q ss_pred CceecCCCeEeccCCCCCCCCCCCCCHHHHHHHHHHHhc
Q 031715 92 TCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMA 130 (154)
Q Consensus 92 Pnv~~~~G~vcl~~l~~~~~W~p~~~i~~vl~~i~~ll~ 130 (154)
|||+. +|+||+++|. ++|+|+++|++||.+|+++|.
T Consensus 101 PNV~~-~G~ICL~iL~--~~WsP~~ti~~vL~sI~slL~ 136 (136)
T 2a7l_A 101 PHVYS-NGHICLSILT--EDWSPALSVQSVCLSIISMLS 136 (136)
T ss_dssp TTBCT-TCBBCCGGGT--TTCCTTSCHHHHHHHHHHHTC
T ss_pred ccCCC-CCeEEchhcC--CCCCCCCcHHHHHHHHHHHhC
Confidence 99995 9999999996 899999999999999999984
No 47
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=100.00 E-value=5.2e-38 Score=263.34 Aligned_cols=130 Identities=25% Similarity=0.422 Sum_probs=121.3
Q ss_pred hHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEecCCCCCCCCCeEEEecccccCc
Q 031715 14 RNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTC 93 (154)
Q Consensus 14 r~~RL~~El~~l~~~~~~~~~~~~~~~~~~i~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~HPn 93 (154)
..|||++|+++++++++++ +.+.+ .++| +++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+|||||
T Consensus 4 a~~RL~kEl~~l~~~~~~~-~~~~p-~~~n--l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 79 (399)
T 4ddg_A 4 ALKRIHKELNDLARDPPAQ-CSAGP-VGDD--MFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPN 79 (399)
T ss_dssp HHHHHHHHHHHHHHSCCSS-EEEEE-ETTE--EEEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCCCTT
T ss_pred HHHHHHHHHHHHHhCCCCC-EEEEE-cCCc--ceEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeeccccccc
Confidence 4789999999999999888 66665 4566 569999999999999999999999999999999999999999999999
Q ss_pred eecCCCeEeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCChhhhhh
Q 031715 94 VNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGPHHMDVY 150 (154)
Q Consensus 94 v~~~~G~vcl~~l~~~~~W~p~~~i~~vl~~i~~ll~~P~~~~~~~~~~~~~~~~~~ 150 (154)
|++ +|.||+++|. ++|+|+++|.+||.+|+++|.+|++++|+|++++++|+++.
T Consensus 80 v~~-~G~iCl~il~--~~W~p~~~i~~vL~~i~~ll~~pnp~~p~n~~aa~~~~~d~ 133 (399)
T 4ddg_A 80 INS-NGSISLDILR--SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDR 133 (399)
T ss_dssp BCT-TCBBCCGGGT--TSCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCH
T ss_pred cCC-CCeEeCcccc--cCCCccccHHHHHHHHHHHHcCCCCCchhhHHHHHHHHHCH
Confidence 996 9999999996 99999999999999999999999999999999999997654
No 48
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=100.00 E-value=1.7e-38 Score=238.18 Aligned_cols=132 Identities=22% Similarity=0.396 Sum_probs=115.7
Q ss_pred cchHHHHHHHHHHhHcCC------------CCCceEEeecCCCCCceeEEEEEEECCCCCCCC--CcEEEEEEecCCCCC
Q 031715 12 VPRNFRLLEELERGEKGI------------GDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHE--GRIYQLKLFCDKDYP 77 (154)
Q Consensus 12 ~pr~~RL~~El~~l~~~~------------~~~~~~~~~~~~~~i~l~~w~~~i~Gp~~tpye--gg~f~~~i~fp~~yP 77 (154)
..+.+||++|++++++++ ..+ +.+. ++++|++ +|+++|.||++|||+ ||.|+|+|.||++||
T Consensus 7 ~~a~kRL~kEl~~l~~~~~~~~~~~~~~~~~~~-i~~~-~~~~nl~--~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP 82 (167)
T 4ds2_A 7 NISNKRIIKDLKLLLEEVDANNEANSSGSPHST-AIFS-VDTDTIY--NWILKVKAPADSVYGGAGNTYQLSVLFSDDYP 82 (167)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHTTC----CCSSC-EEEE-EEESSTT--EEEEEEECCTTSGGGTTCCEEEEEEECCTTTT
T ss_pred HHHHHHHHHHHHHHHhCcccccccccccCCCCc-EEEE-eCCCccc--EEEEEEECCCCCCccCCCCEEEEEEECCCCCC
Confidence 345789999999999876 445 4555 4667754 999999999999999 999999999999999
Q ss_pred CCCCeEEEecccccCceecCCCeEeccCCCCCCCCCCCCCHHHHHH-HHHHHhcC--CCCCCCCCCCCCChhhhhh
Q 031715 78 EKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILT-QLKKEMAA--PHNRKLVQPPEGPHHMDVY 150 (154)
Q Consensus 78 ~~pP~v~f~t~i~HPnv~~~~G~vcl~~l~~~~~W~p~~~i~~vl~-~i~~ll~~--P~~~~~~~~~~~~~~~~~~ 150 (154)
++||+|+|.|+||||||+ .+|.||+++|. ++|+|++++.++|+ .|+.++.+ |++++|+|+||+.+|.++.
T Consensus 83 ~~pP~v~f~t~i~HPnv~-~~G~iCl~il~--~~W~p~~~i~~vll~~l~~l~~~~~pn~~~p~n~eaa~l~~~d~ 155 (167)
T 4ds2_A 83 HEPPTVRFVTPVYSPLVT-GEGGICDRMVN--DFWTPDQHASDVIKLVLDRVFSQYKSRRDDDVNPEARHYLEKFP 155 (167)
T ss_dssp TSCCEEEESSCCCCSSCC-TTSCCCTHHHH--TTCCTTSCHHHHHHHHHHHHHTSTTSCCSCCCCHHHHHHHHHCH
T ss_pred CCCCEEEEeCCcccccCC-CCCEEEcccCc--CCCCCCCChHHHHHHHHHHHHhcCCCCCcchHhHHHHHHHHHCH
Confidence 999999999999999999 59999999996 99999999999755 67777774 8999999999999998664
No 49
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=9.9e-36 Score=226.84 Aligned_cols=126 Identities=20% Similarity=0.232 Sum_probs=99.4
Q ss_pred ccCC-CCccccchHHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEecCCCCCCCCC
Q 031715 3 LGSG-GSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPP 81 (154)
Q Consensus 3 ~~~~-~~~~~~pr~~RL~~El~~l~~~~~~~~~~~~~~~~~~i~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP 81 (154)
|+++ +++...++.+||++|+++|+++++++ +.+.+ +++| +++|+++|.||++||||||+|+|+|.||++||++||
T Consensus 3 mss~~~~~~~~~a~~RL~kEl~~l~~~~~~~-i~~~p-~~~n--l~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP 78 (187)
T 2f4w_A 3 MSSTSSKRAPTTATQRLKQDYLRIKKDPVPY-ICAEP-LPSN--ILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPP 78 (187)
T ss_dssp -----------CHHHHHHHHHHHHHHSCCTT-EEEEE-ETTE--EEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCC
T ss_pred CCccCCCCCccHHHHHHHHHHHHHHhCCCCC-EEEEE-cCCc--cceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCC
Confidence 4443 34556678999999999999999888 66664 5667 569999999999999999999999999999999999
Q ss_pred eEEEecccccCceecCCCeEeccCCCC-CCCCCCCCCHHHHHHHHHHHhcCCCCC
Q 031715 82 SVRFHSRINMTCVNHETGVVEPKKFGL-LVNWQREYTMEDILTQLKKEMAAPHNR 135 (154)
Q Consensus 82 ~v~f~t~i~HPnv~~~~G~vcl~~l~~-~~~W~p~~~i~~vl~~i~~ll~~P~~~ 135 (154)
+|+|.|+ |||+++ +|+||+++|+. .++|+|+++|.+||.+|+++|.+|+++
T Consensus 79 ~v~f~T~--~~~~~~-~G~ICL~iL~~~~~~W~P~~ti~~vL~si~sll~~p~p~ 130 (187)
T 2f4w_A 79 SIYMITP--NGRFKC-NTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPT 130 (187)
T ss_dssp EEEECSC--CSSBCT-TSCBC----------CCTTCCHHHHHHHHHHHHHSCCCC
T ss_pred cccccCC--Cceecc-CCeEeeeccccCccCCCCcCcHHHHHHHHHHHhcCCCCC
Confidence 9999999 999996 99999999831 278999999999999999999998865
No 50
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=100.00 E-value=3.8e-35 Score=239.01 Aligned_cols=135 Identities=16% Similarity=0.214 Sum_probs=115.3
Q ss_pred ccccchHHHHHHHHHHhHcCCCCCc---eEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEecCCCCCCCCCeEEE
Q 031715 9 SVVVPRNFRLLEELERGEKGIGDGT---VSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRF 85 (154)
Q Consensus 9 ~~~~pr~~RL~~El~~l~~~~~~~~---~~~~~~~~~~i~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f 85 (154)
..+..+.+||++|+++|+++++++. +.+. ++++|++ .|+++|.||++|||+||+|+|+|.||++||++||+|+|
T Consensus 72 ~~s~~~~kRL~kEl~~L~k~~p~g~~~~i~v~-~~ednl~--~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F 148 (323)
T 3ceg_A 72 ANSAARARRLAQEAVTLSTSLPLSSSSSVFVR-CDEERLD--IMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNL 148 (323)
T ss_dssp CCCHHHHHHHHHHHHHHHHHCCCCSSCCEEEE-EESSCTT--EEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEE
T ss_pred CCCHHHHHHHHHHHHHHHhCCCCCcccceeec-ccCCCcc--ccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEE
Confidence 3455679999999999999887753 2222 3567754 99999999999999999999999999999999999999
Q ss_pred ecc-----cccCceecCCCeEeccCCCC-----CCCCCCCC-CHHHHHHHHHHHhc--CCCCCCCCCCCC--CChhh
Q 031715 86 HSR-----INMTCVNHETGVVEPKKFGL-----LVNWQREY-TMEDILTQLKKEMA--APHNRKLVQPPE--GPHHM 147 (154)
Q Consensus 86 ~t~-----i~HPnv~~~~G~vcl~~l~~-----~~~W~p~~-~i~~vl~~i~~ll~--~P~~~~~~~~~~--~~~~~ 147 (154)
.|+ ||||||+. +|.||+++|+. .++|+|++ +|.+||++|++||. +|+.++|.++++ +.+|.
T Consensus 149 ~T~~g~~~ifHPNV~~-~G~ICLsiL~~~~g~~~e~WsPa~stI~~VLlsIqsLL~~~~Pn~~dP~~~~a~a~~~~~ 224 (323)
T 3ceg_A 149 ETTGGHSVRFNPNLYN-DGKVCLSILNTWHGRPEEKWNPQTSSFLQVLVSVQSLILVAEPYFNEPGYERSRGTPSGT 224 (323)
T ss_dssp CCSTTTTCCCBTTBCT-TCBBCCGGGTSSCCCGGGSCCTTTCCHHHHHHHHHHHTSCSSGGGGSTTGGGGTTSHHHH
T ss_pred eccCCCcccccCCCCc-CCeEechhhccccCCCcCCCCcCcCCHHHHHHHHHHHHcCCCCCCCCccCHHHHHhhhhh
Confidence 998 99999995 99999999952 15899999 89999999999996 787899999876 34454
No 51
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=100.00 E-value=2.6e-35 Score=224.38 Aligned_cols=122 Identities=17% Similarity=0.242 Sum_probs=107.1
Q ss_pred ccchHHHHHHHHHHhHcCC---CCCceEEeecCCCCCceeEEEEEEECC-CCCCCCC-----------cEEEEEEecCCC
Q 031715 11 VVPRNFRLLEELERGEKGI---GDGTVSYGMDDGDDIYMRSWTGTIIGP-HNTVHEG-----------RIYQLKLFCDKD 75 (154)
Q Consensus 11 ~~pr~~RL~~El~~l~~~~---~~~~~~~~~~~~~~i~l~~w~~~i~Gp-~~tpyeg-----------g~f~~~i~fp~~ 75 (154)
+..+.+||++|+++|++++ ..+ +++.+ .++| +++|+++|.|| ++|||+| |.|+|+|.||++
T Consensus 25 s~~a~~RL~kEl~~l~~~~~~~~~~-~~~~p-~~dn--l~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~~ 100 (186)
T 1zuo_A 25 SVQASDRLMKELRDIYRSQSYKTGI-YSVEL-INDS--LYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDN 100 (186)
T ss_dssp CHHHHHHHHHHHHHHHTSHHHHTTS-EEEEE-ETTE--EEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCTT
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCCc-EEEEE-cCCc--cceeEEEEECCCCCCCccccchhhccccCceEEEEEEECCCC
Confidence 3446899999999999987 455 67765 4456 56999999998 9999998 899999999999
Q ss_pred CCCCCCeEEEecccccC-ceecCCCeEeccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCC
Q 031715 76 YPEKPPSVRFHSRINMT-CVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLV 138 (154)
Q Consensus 76 yP~~pP~v~f~t~i~HP-nv~~~~G~vcl~~l~~~~~W~p~~~i~~vl~~i~~ll~~P~~~~~~ 138 (154)
||++||+|+|.|++||| ||+. +|.||+++|. .++|+|+++|++||++|+++|.+|+.+...
T Consensus 101 YP~~PP~V~f~tpi~hPnnV~~-~G~ICL~iL~-~~~WsP~~ti~~VL~sI~slL~~p~a~~~~ 162 (186)
T 1zuo_A 101 FPFDPPFVRVVLPVLSGGYVLG-GGALCMELLT-KQGWSSAYSIESVIMQINATLVKGKARVQF 162 (186)
T ss_dssp TTSSCCEEEEEESCEESTTBCG-GGBBCCGGGS-TTTCCTTSCHHHHHHHHHHHHHHTTCEECT
T ss_pred CCCCCCeEEEeCCccCCCccCC-CCcEEeccCC-CCCCCCcCcHHHHHHHHHHHHcCCChhHhh
Confidence 99999999999999999 6995 9999999995 478999999999999999999998765443
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.91 E-value=7e-26 Score=167.86 Aligned_cols=97 Identities=11% Similarity=0.120 Sum_probs=84.2
Q ss_pred HHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCc----------EEEEEEecCCCCCCCCCeEE
Q 031715 15 NFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGR----------IYQLKLFCDKDYPEKPPSVR 84 (154)
Q Consensus 15 ~~RL~~El~~l~~~~~~~~~~~~~~~~~~i~l~~w~~~i~Gp~~tpyegg----------~f~~~i~fp~~yP~~pP~v~ 84 (154)
.+||++|++.|++. +. +++++ ++.|.+.+.||+||+|||| .|.++|.||++||++||+|+
T Consensus 34 ~~RL~eE~k~L~k~-------v~-p~k~n--~~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV~ 103 (172)
T 2z6o_A 34 VQRLKEEYQSLIRY-------VE-NNKNA--DNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIA 103 (172)
T ss_dssp HHHHHHHHHHHHHH-------HH-HHHHT--TCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCB
T ss_pred HHHHHHHHHHHHHH-------hc-cCccc--cceeEEeecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCCeee
Confidence 67999999999992 12 34455 3499999999999999999 99999999999999999999
Q ss_pred Eecc-cccCceecCCCeEeccCCCCCC---CCCCCCCHHHHHH
Q 031715 85 FHSR-INMTCVNHETGVVEPKKFGLLV---NWQREYTMEDILT 123 (154)
Q Consensus 85 f~t~-i~HPnv~~~~G~vcl~~l~~~~---~W~p~~~i~~vl~ 123 (154)
|.+. +|||||+. +|+||+++|. .. .|+|.++|.++|.
T Consensus 104 F~~~~~~hpnmY~-~G~ICLdIL~-kp~Ws~~~P~~~IahiL~ 144 (172)
T 2z6o_A 104 VPELDGKTAKMYR-GGKICLTDHF-KPLWARNVPKFGLAHLMA 144 (172)
T ss_dssp CGGGTTTCSSBCT-TSBBCCCTTH-HHHHHHHTTSCCHHHHHH
T ss_pred eCCCCCCCCCCCC-CCcEechhhc-cccccccCCccCHHHHHh
Confidence 9998 99999996 9999999983 23 4559999999975
No 53
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.78 E-value=8e-19 Score=130.43 Aligned_cols=116 Identities=12% Similarity=0.186 Sum_probs=86.9
Q ss_pred HHHHHHHHHHhHcCCCCCceEE-eecCCCCCceeEEEEEEECCCCCCCCCcE---EEEEEecCCCCCCCCCeEEEecc--
Q 031715 15 NFRLLEELERGEKGIGDGTVSY-GMDDGDDIYMRSWTGTIIGPHNTVHEGRI---YQLKLFCDKDYPEKPPSVRFHSR-- 88 (154)
Q Consensus 15 ~~RL~~El~~l~~~~~~~~~~~-~~~~~~~i~l~~w~~~i~Gp~~tpyegg~---f~~~i~fp~~yP~~pP~v~f~t~-- 88 (154)
-+|..+|+.++.+.-+...... ....+|. ..++-+.+.|.-..+|+|+. |.+.|.||++||++||.|.|.++
T Consensus 30 ~~~~~~dv~~~l~~yp~L~p~t~~yt~~dG--~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~ 107 (162)
T 3r3q_A 30 GRTTFHDSLALLDNFHSLRPRTRVFTHSDG--TPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENF 107 (162)
T ss_dssp HHHHHHHHHHHHHHCTTEEEEEEEEECTTS--CEEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGC
T ss_pred hhHHHHHHHHHHHhCCCCceeeeeEEcCCC--ChheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCCc
Confidence 3567778777754322221111 0112233 22555666666668999999 88999999999999999988651
Q ss_pred --------cc-cCceecCCCeEeccCCCCCCCCCC-CCCHHHHHHHHHHHhcCCCCCC
Q 031715 89 --------IN-MTCVNHETGVVEPKKFGLLVNWQR-EYTMEDILTQLKKEMAAPHNRK 136 (154)
Q Consensus 89 --------i~-HPnv~~~~G~vcl~~l~~~~~W~p-~~~i~~vl~~i~~ll~~P~~~~ 136 (154)
|+ |||||. +|+||++.| ++|++ +.+|.+||.+|+++|.+|++++
T Consensus 108 ~m~~~~~~I~~hpnVD~-~G~I~lpyL---~~W~p~~s~L~~ll~~l~~lf~ep~~d~ 161 (162)
T 3r3q_A 108 DMNTISSSLPIQEYIDS-NGWIALPIL---HAWDPAAMNLIMVVQELMSLLHEPPQDQ 161 (162)
T ss_dssp CTTTSCTTSTHHHHBCT-TSBBCCGGG---GSCCGGGCCHHHHHHHHHHTTSCCCCCC
T ss_pred cccccccccCCCCCCCC-CCcEeCccc---ccCCCCcCcHHHHHHHHHHHhcCCCCCC
Confidence 77 999996 999999998 57999 6899999999999999999875
No 54
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.65 E-value=3.3e-17 Score=119.16 Aligned_cols=81 Identities=17% Similarity=0.233 Sum_probs=68.2
Q ss_pred HHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCc----------EEEEEEecCCCCCCCCCeEE
Q 031715 15 NFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGR----------IYQLKLFCDKDYPEKPPSVR 84 (154)
Q Consensus 15 ~~RL~~El~~l~~~~~~~~~~~~~~~~~~i~l~~w~~~i~Gp~~tpyegg----------~f~~~i~fp~~yP~~pP~v~ 84 (154)
..||..|++.|-+-- ... ...|+ .|...+.|++||+|+|+ .|+++++||.+||..||+|+
T Consensus 36 ~~RlkeEy~alI~yv-----~~n-K~~d~----dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI~ 105 (168)
T 3kpa_A 36 TARLKEEYASLITYV-----EHN-KASDS----HWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEIA 105 (168)
T ss_dssp HHHHHHHHHHHHHHH-----HHH-HHTTC----CCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCB
T ss_pred HHHHHHHHHHHHHHH-----Hhc-ccccC----CeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEee
Confidence 579999999886511 011 12233 89999999999999999 99999999999999999999
Q ss_pred Eecc-cccCceecCCCeEeccCC
Q 031715 85 FHSR-INMTCVNHETGVVEPKKF 106 (154)
Q Consensus 85 f~t~-i~HPnv~~~~G~vcl~~l 106 (154)
|.+. .+|||++. +|+||++++
T Consensus 106 Fp~ldgkt~kmYr-~GkICLdIh 127 (168)
T 3kpa_A 106 LPELEGKTVKMYR-GGKICMTTH 127 (168)
T ss_dssp CGGGTTTCSSEET-TTEECCCTT
T ss_pred cccccCcCccccC-CCcEEeccc
Confidence 9995 89999995 999999984
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=99.51 E-value=6.8e-14 Score=102.23 Aligned_cols=77 Identities=19% Similarity=0.342 Sum_probs=68.8
Q ss_pred eeEEEEEEECCCCCCCCCcEEEE--EEecCCCCCCCCCeEEEecc------cccCceecCCCeEeccCCCCCCCCCC-CC
Q 031715 46 MRSWTGTIIGPHNTVHEGRIYQL--KLFCDKDYPEKPPSVRFHSR------INMTCVNHETGVVEPKKFGLLVNWQR-EY 116 (154)
Q Consensus 46 l~~w~~~i~Gp~~tpyegg~f~~--~i~fp~~yP~~pP~v~f~t~------i~HPnv~~~~G~vcl~~l~~~~~W~p-~~ 116 (154)
|..|.++|. .+|+|+.|.+ .|-||++||++||.| |.++ ..|||||. +|+||++.| ++|++ ..
T Consensus 53 LL~l~GtIp----v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I~~~~~Vd~-~G~i~lpyL---~~W~~~~s 123 (146)
T 3obq_A 53 LMNLTGTIP----VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTIKTGKHVDA-NGKIYLPYL---HEWKHPQS 123 (146)
T ss_dssp EEEEEEEEE----EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEECCBTTBCT-TCBBCCHHH---HTCCTTTC
T ss_pred EEEEEEEee----eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCEECCCCCCCC-CCCEecccc---cccCCCCC
Confidence 789999998 5899999995 888999999999999 6665 48999996 999999998 46988 79
Q ss_pred CHHHHHHHHHHHhcC
Q 031715 117 TMEDILTQLKKEMAA 131 (154)
Q Consensus 117 ~i~~vl~~i~~ll~~ 131 (154)
+|.+++..+++.|.+
T Consensus 124 nL~~ll~~l~~~F~~ 138 (146)
T 3obq_A 124 DLLGLIQVMIVVFGD 138 (146)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhh
Confidence 999999999999974
No 56
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.37 E-value=0.032 Score=38.55 Aligned_cols=67 Identities=22% Similarity=0.192 Sum_probs=42.2
Q ss_pred HHHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEecCCCCCCCCCeEEEec
Q 031715 15 NFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHS 87 (154)
Q Consensus 15 ~~RL~~El~~l~~~~~~~~~~~~~~~~~~i~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t 87 (154)
..+...|+..|+.--++. +.. .+... ..+.+.+....+..-+.-.+.+.|.||++||..||.+....
T Consensus 12 ~e~q~~EleaL~sIy~d~-~~~--~~~~~---~~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 78 (128)
T 2ebm_A 12 GEEQRNELEALESIYPDS-FTV--LSENP---PSFTITVTSEAGENDETVQTTLKFTYSEKYPDEAPLYEIFS 78 (128)
T ss_dssp HHHHHHHHHHHHHHCSSS-EEE--CCSSS---CEEEECCBCCCCTTSCCCBEEEEEECCSSTTTSCCEEEEEE
T ss_pred HHHHHHHHHHHHHHccCc-eEE--ccCCC---CEEEEEEecCCCCCcCceeEEEEEEeCCCCCCCCceEEEEc
Confidence 456778888887633333 322 12222 15666665322222234478899999999999999998765
No 57
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=94.66 E-value=0.28 Score=33.69 Aligned_cols=109 Identities=15% Similarity=0.131 Sum_probs=59.1
Q ss_pred HHHHHHHHHhHcCCCCCceEEeecCC-CCCceeEEEEEEECCCCCCCC--CcEEEEEEecCCCCCCCCCeEEEecccccC
Q 031715 16 FRLLEELERGEKGIGDGTVSYGMDDG-DDIYMRSWTGTIIGPHNTVHE--GRIYQLKLFCDKDYPEKPPSVRFHSRINMT 92 (154)
Q Consensus 16 ~RL~~El~~l~~~~~~~~~~~~~~~~-~~i~l~~w~~~i~Gp~~tpye--gg~f~~~i~fp~~yP~~pP~v~f~t~i~HP 92 (154)
.+...|+..|+.--.+. +...-... .. -..+.+.+..+.+..-+ .-.+.+.|.+|++||..+|.+......
T Consensus 11 e~~~~EleaL~SIY~de-~~~~~~~~~~~--~~~~~i~l~~~~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~~~~~~--- 84 (128)
T 2day_A 11 WVLPSEVEVLESIYLDE-LQVIKGNGRTS--PWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRNPR--- 84 (128)
T ss_dssp CHHHHHHHHHHHHSTTT-EEEECCTTSSC--CEEEEEEECCSCCSSSSCCCCEEEEEEEECSSTTSSCCEEEEEEEE---
T ss_pred HHHHHHHHHHHHHCCCc-eEEecCCCCCC--CeEEEEEEecCCCCCccccceeEEEEEEcCCCCCCCCCCeEEEcCC---
Confidence 36788888887643344 32221111 12 12455555422221111 236889999999999999999887642
Q ss_pred ceecC-CCeEeccCCCCCCCC---CCCCCHHHHHHHHHHHhcCCC
Q 031715 93 CVNHE-TGVVEPKKFGLLVNW---QREYTMEDILTQLKKEMAAPH 133 (154)
Q Consensus 93 nv~~~-~G~vcl~~l~~~~~W---~p~~~i~~vl~~i~~ll~~P~ 133 (154)
++... -..+|- .|. +.| ...--|.+++..++..|.+-|
T Consensus 85 ~L~~~~~~~L~~-~L~--~~~~e~~G~~mif~lv~~lqe~l~~~n 126 (128)
T 2day_A 85 GLSDEQIHTILQ-VLG--HVAKAGLGTAMLYELIEKGKEILSGPS 126 (128)
T ss_dssp SSCHHHHHHHHH-HHH--HHHHHTTTSCCHHHHHHHHHHHHCCCC
T ss_pred CCCHHHHHHHHH-HHH--HHHHHhCCCEEhHHHHHHHHHHHHhcc
Confidence 22210 011111 111 233 223358888888888887643
No 58
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=94.48 E-value=0.37 Score=33.39 Aligned_cols=117 Identities=15% Similarity=0.182 Sum_probs=59.7
Q ss_pred CCCCccccchHHHHHHHHHHhHcCCCCCceEEeecCCCC---C-ceeEEEEEEECCCC-C-CCCCcEEEEEEecCCCCCC
Q 031715 5 SGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDD---I-YMRSWTGTIIGPHN-T-VHEGRIYQLKLFCDKDYPE 78 (154)
Q Consensus 5 ~~~~~~~~pr~~RL~~El~~l~~~~~~~~~~~~~~~~~~---i-~l~~w~~~i~Gp~~-t-pyegg~f~~~i~fp~~yP~ 78 (154)
++++....--..+...|+..|+.--.+. +... +.+. . .-..+.+.+. +.+ + .-..-.+.+.|.||++||.
T Consensus 2 ~~~~~~~~~~~e~q~~EleaL~SIY~d~-~~~~--~~~~~~~~~~~~~~~i~l~-~~~~~~~~~~~~~~L~v~~p~~YP~ 77 (137)
T 1ukx_A 2 SSGSSGMESYSQRQDHELQALEAIYGSD-FQDL--RPDARGRVREPPEINLVLY-PQGLAGEEVYVQVELRVKCPPTYPD 77 (137)
T ss_dssp CCCSCCCCCHHHHHHHHHHHHHHHTSSS-EEEC--CCCCSSSCCCCCCEEEEEC-CTTSCSSSCSCEEEEEECCCTTTTS
T ss_pred CCCCCCCcchHHHHHHHHHHHHHHCccc-ceec--cCcccCccCCCcEEEEEEe-cCCcCCcccceEEEEEEECCCCCCC
Confidence 3333333333556777888887633333 2221 2110 0 0014556665 222 1 0012368899999999999
Q ss_pred CCCeEEEecccccCceecCC-CeEeccCCCCCCCCC---CCCCHHHHHHHHHHHhcC
Q 031715 79 KPPSVRFHSRINMTCVNHET-GVVEPKKFGLLVNWQ---REYTMEDILTQLKKEMAA 131 (154)
Q Consensus 79 ~pP~v~f~t~i~HPnv~~~~-G~vcl~~l~~~~~W~---p~~~i~~vl~~i~~ll~~ 131 (154)
.+|.|..... .++.... ..+| ..|. ..|. ..--|.+++..++..|.+
T Consensus 78 ~~P~i~l~~~---~~L~~~~~~~L~-~~L~--~~~~e~~G~~mif~lv~~lqe~l~~ 128 (137)
T 1ukx_A 78 VVPEIDLKNA---KGLSNESVNLLK-SHLE--ELAKKQCGEVMIFELAHHVQSFLSE 128 (137)
T ss_dssp SCCCCEEEEE---ESSSSSHHHHHH-HHHH--HHHHHHTTSCCHHHHHHHHHHHHHH
T ss_pred CCCcEEEecC---CCCCHHHHHHHH-HHHH--HHHHHhCCCEEhHHHHHHHHHHHHh
Confidence 9999987543 1222100 0111 1111 2332 234588888888888865
No 59
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=93.60 E-value=0.21 Score=34.86 Aligned_cols=40 Identities=15% Similarity=0.187 Sum_probs=28.9
Q ss_pred EEEEEEECCCCCCCCCcEEEEEEecCCCCCCCCCeEEEecc
Q 031715 48 SWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSR 88 (154)
Q Consensus 48 ~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~ 88 (154)
.+.+.+....+ .-..-.+.+.|.+|++||..+|.+.....
T Consensus 47 ~f~I~l~~~~~-~~~~~~~~L~~~~p~~YP~~~P~i~l~~~ 86 (138)
T 2yz0_A 47 IFEITLRSVDK-EPVESSITLHFAMTPMYPYTAPEIEFKNV 86 (138)
T ss_dssp CEEEEEECSSC-SSCCCEEEEEEECCSSTTSSCCEEEEECC
T ss_pred EEEEEEecCCC-CCCceEEEEEEECCCCCCCCCCeEEEecC
Confidence 66777773322 11234788999999999999999987653
No 60
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=90.74 E-value=0.48 Score=32.50 Aligned_cols=66 Identities=12% Similarity=0.049 Sum_probs=37.8
Q ss_pred HHHHHHHHhHcCCCC--CceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEecCCCCCCCCCeEEEe
Q 031715 17 RLLEELERGEKGIGD--GTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFH 86 (154)
Q Consensus 17 RL~~El~~l~~~~~~--~~~~~~~~~~~~i~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~ 86 (154)
+...|+..|+.--.+ .+....- ...+ ...+.+.+.. .+..=..-.+.+.|.+|.+||..+|.+...
T Consensus 11 ~q~~EleaL~SIy~d~~e~~~~~~-~~~~--~~~f~i~l~~-~~~~~~~~~~~L~~~~p~~YP~~~P~i~l~ 78 (128)
T 2ebk_A 11 PVQEELSVLAAIFCRPHEWEVLSR-SETD--GTVFRIHTKA-EGFMDADIPLELVFHLPVNYPSCLPGISIN 78 (128)
T ss_dssp HHHHHHHHHHHHHCCTTTCCCSEE-CSSS--CEEEEEEEEC-CTTTTCCCEEEEEEEECSSTTSSCCCCCCC
T ss_pred HHHHHHHHHHHHcCCCCceEEecC-CCCC--CCeEEEEecC-CCCCCCCeEEEEEEECCCCCCCCCCeEEEE
Confidence 567788777652211 2111111 1111 1367777763 221001237889999999999999998755
No 61
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=89.61 E-value=1.3 Score=33.02 Aligned_cols=84 Identities=18% Similarity=0.241 Sum_probs=58.9
Q ss_pred HHHHHHHHHhHcCCCCCceEEeecCCCCCceeEEEEEEECCCCCCCCCcEEEEEEecCCCCCCCCCeEEEecccccCcee
Q 031715 16 FRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVN 95 (154)
Q Consensus 16 ~RL~~El~~l~~~~~~~~~~~~~~~~~~i~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~yP~~pP~v~f~t~i~HPnv~ 95 (154)
++|.+|+..+-=+.. ... + ++ +...++.+.... |....++|.++.+||.++|.+...-|. |
T Consensus 4 ~~li~Ei~~iGW~~l----~~i--d-~~--~~~i~l~~~D~~-----gR~H~l~v~l~~~yp~~~P~~~~DlP~--~--- 64 (186)
T 3zqs_A 4 SSLIEEIGTLGWDKL----VYA--D-TC--FSTIKLKAEDAS-----GREHLITLKLKAKYPAESPDYFVDFPV--P--- 64 (186)
T ss_dssp CSHHHHHHHHCGGGE----EEE--C-TT--SSEEEEEEECTT-----SCEEEEEEECCTTTTTSCCEEECCCSS--C---
T ss_pred HHHHHHHHHhCCcee----eee--c-CC--ccEEEEEEEeCC-----CCeEEEEEEECCCCCCCCCeeEEcCCC--C---
Confidence 468888888854332 111 2 23 457788877444 568899999999999999988655442 1
Q ss_pred cCCCeEeccCCCCCCCCCCCCCHHHHHHHHHHHhc
Q 031715 96 HETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMA 130 (154)
Q Consensus 96 ~~~G~vcl~~l~~~~~W~p~~~i~~vl~~i~~ll~ 130 (154)
+ .-.|++..+|.+++..++..|.
T Consensus 65 ----------~--~~~w~~~ssL~~v~~qF~~~Le 87 (186)
T 3zqs_A 65 ----------F--CASWTPQSSLISIYSQFLAAIE 87 (186)
T ss_dssp ----------C--CCCCCTTCCHHHHHHHHHHHHH
T ss_pred ----------c--ccccCCCccHHHHHHHHHHHHH
Confidence 0 1479999999999888777643
No 62
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=88.91 E-value=0.63 Score=33.26 Aligned_cols=24 Identities=17% Similarity=0.106 Sum_probs=21.6
Q ss_pred EEEEEEecCCCCCCCCCeEEEecc
Q 031715 65 IYQLKLFCDKDYPEKPPSVRFHSR 88 (154)
Q Consensus 65 ~f~~~i~fp~~yP~~pP~v~f~t~ 88 (154)
.+.+.|.+|.+||..+|.+.....
T Consensus 76 ~i~L~v~lP~~YP~~~P~i~l~~~ 99 (154)
T 2daw_A 76 KIDLQVTMPHSYPYLALQLFGRSS 99 (154)
T ss_dssp EEEEEEEECSSTTSSCCEEEEECS
T ss_pred eEEEEEEcCCCCCCCCCcEEEEeC
Confidence 799999999999999999987663
No 63
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=87.53 E-value=0.36 Score=34.29 Aligned_cols=24 Identities=21% Similarity=0.402 Sum_probs=21.3
Q ss_pred EEEEEEecCCCCCCCCCeEEEecc
Q 031715 65 IYQLKLFCDKDYPEKPPSVRFHSR 88 (154)
Q Consensus 65 ~f~~~i~fp~~yP~~pP~v~f~t~ 88 (154)
.+.+.|.+|.+||..||.+.....
T Consensus 74 ~l~L~v~lP~~YP~~~P~i~l~~~ 97 (152)
T 2dax_A 74 MFSLACILPFKYPAVLPEITVRSV 97 (152)
T ss_dssp EEEEEEEECSSTTSSCCCCEEECT
T ss_pred eEEEEEECCCCCCCCCCeEEEEcc
Confidence 588999999999999999987764
No 64
>3u3c_B Paxillin LD2 peptide; 4-helix bundle, focal adhesion, tyrosine kinase, transferase-signaling protein complex; 3.70A {Homo sapiens}
Probab=53.08 E-value=10 Score=18.42 Aligned_cols=19 Identities=32% Similarity=0.230 Sum_probs=16.2
Q ss_pred hHHHHHHHHHHhHcCCCCC
Q 031715 14 RNFRLLEELERGEKGIGDG 32 (154)
Q Consensus 14 r~~RL~~El~~l~~~~~~~ 32 (154)
..-||+-|+...|.+++.|
T Consensus 6 eldrlllelnavqhnppsg 24 (26)
T 3u3c_B 6 ELDRLLLELNAVQHNPPSG 24 (26)
T ss_pred HHHHHHHHHhhhccCCCCC
Confidence 4679999999999988766
No 65
>3g9r_A Fusion complex of HIV-1 envelope glycoprotein and saccharomyces cerevisiae general...; GP41, MPER, membrane fusion, AIDS; 2.00A {Human immunodeficiency virus 1}
Probab=49.72 E-value=9.9 Score=20.92 Aligned_cols=16 Identities=25% Similarity=0.275 Sum_probs=13.2
Q ss_pred cchHHHHHHHHHHhHc
Q 031715 12 VPRNFRLLEELERGEK 27 (154)
Q Consensus 12 ~pr~~RL~~El~~l~~ 27 (154)
+++.+|+..|++++++
T Consensus 27 v~~~~~~~~~~~~~~~ 42 (42)
T 3g9r_A 27 KSKIKRIENEIKRIKK 42 (42)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhcC
Confidence 4678999999998864
No 66
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=27.93 E-value=55 Score=24.39 Aligned_cols=25 Identities=8% Similarity=0.223 Sum_probs=21.8
Q ss_pred CcEEEEEEecCCCCCC-----CCCeEEEec
Q 031715 63 GRIYQLKLFCDKDYPE-----KPPSVRFHS 87 (154)
Q Consensus 63 gg~f~~~i~fp~~yP~-----~pP~v~f~t 87 (154)
.|.|.|+-.+|--||. .||.|.|.-
T Consensus 110 ~G~y~F~TI~Pg~yp~~~G~~R~~HIH~~V 139 (209)
T 2bum_A 110 TGFWSFNTIKPGAVPGRKGSTQAPHISLII 139 (209)
T ss_dssp TCCEEEEEECCCCCBCSTTCBCCCCEEEEE
T ss_pred CcEEEEEEEccCcccCCCCCccCcEEEEEE
Confidence 5889999999999998 799988864
No 67
>2rf4_B DNA-directed RNA polymerase I subunit RPA4; transferase DNA/RNA, DNA-binding, phosphorylation, POL I, POLI, rpoli, nuclear protein; 3.10A {Saccharomyces cerevisiae}
Probab=26.64 E-value=28 Score=22.49 Aligned_cols=15 Identities=7% Similarity=0.102 Sum_probs=11.6
Q ss_pred ccchHHHHHHHHHHh
Q 031715 11 VVPRNFRLLEELERG 25 (154)
Q Consensus 11 ~~pr~~RL~~El~~l 25 (154)
+.+-.||+|+||+-|
T Consensus 60 ~LsQLKRvQRdlrGL 74 (87)
T 2rf4_B 60 SISQLKRIQRDFKGL 74 (87)
T ss_dssp HHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHhhcCC
Confidence 344589999999876
Done!