BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>031716
MDSPSPPSKRRRKNECGDDTSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTF
DYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDI
AASAVLCLGYPLKVCYYLCLSIMIPNSACHQLLF

High Scoring Gene Products

Symbol, full name Information P value
AT5G41850 protein from Arabidopsis thaliana 1.6e-45
PFL_1926
Uncharacterized protein
protein from Pseudomonas protegens Pf-5 4.4e-13
SO_1534
Alpha/beta-hydrolase superfamily protein
protein from Shewanella oneidensis MR-1 1.9e-12
SO_1534
conserved hypothetical protein
protein from Shewanella oneidensis MR-1 1.9e-12
CPS_3543
Putative uncharacterized protein
protein from Colwellia psychrerythraea 34H 5.8e-11
CPS_3543
conserved hypothetical protein
protein from Colwellia psychrerythraea 34H 5.8e-11
PSPTO_2005
Conserved domain protein
protein from Pseudomonas syringae pv. tomato str. DC3000 7.6e-10

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  031716
        (154 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2152960 - symbol:AT5G41850 "AT5G41850" species...   478  1.6e-45   1
UNIPROTKB|Q4KFD8 - symbol:PFL_1926 "Uncharacterized prote...   172  4.4e-13   1
UNIPROTKB|Q8EGR1 - symbol:SO_1534 "Alpha/beta-hydrolase s...   166  1.9e-12   1
TIGR_CMR|SO_1534 - symbol:SO_1534 "conserved hypothetical...   166  1.9e-12   1
UNIPROTKB|Q47YA3 - symbol:CPS_3543 "Putative uncharacteri...   152  5.8e-11   1
TIGR_CMR|CPS_3543 - symbol:CPS_3543 "conserved hypothetic...   152  5.8e-11   1
UNIPROTKB|Q884T1 - symbol:PSPTO_2005 "Conserved domain pr...   147  7.6e-10   1


>TAIR|locus:2152960 [details] [associations]
            symbol:AT5G41850 "AT5G41850" species:3702 "Arabidopsis
            thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008152
            "metabolic process" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB016871
            InterPro:IPR026555 PANTHER:PTHR13136 eggNOG:COG3571
            UniGene:At.43191 UniGene:At.30203 EMBL:BT012186 IPI:IPI00531099
            RefSeq:NP_199000.1 ProteinModelPortal:Q9FJ29 SMR:Q9FJ29
            DNASU:834190 EnsemblPlants:AT5G41850.1 GeneID:834190
            KEGG:ath:AT5G41850 TAIR:At5g41850 HOGENOM:HOG000244632
            InParanoid:Q9FJ29 KO:K07020 OMA:PSSSDWM PhylomeDB:Q9FJ29
            ProtClustDB:CLSN2686409 Genevestigator:Q9FJ29 Uniprot:Q9FJ29
        Length = 224

 Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
 Identities = 91/126 (72%), Positives = 104/126 (82%)

Query:     9 KRRRKNECGDDTSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGG 68
             KRR+ NE   +   SPVV+FAHGAGAPSSSDWMI+WK+ML K L+AVEVVTFDYPY+A G
Sbjct:     6 KRRKVNE-ESEIPCSPVVIFAHGAGAPSSSDWMIRWKEMLKKTLEAVEVVTFDYPYLADG 64

Query:    69 KRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMV-ACKEDIAASAVLC 127
             K++  PKAEKL+EFH +VVK   AKFPGHPLIL GKSMGSRVSCMV A  ED+  SAV+C
Sbjct:    65 KKRVAPKAEKLIEFHLNVVKETAAKFPGHPLILVGKSMGSRVSCMVSAVNEDVTVSAVIC 124

Query:   128 LGYPLK 133
             LGYPLK
Sbjct:   125 LGYPLK 130


>UNIPROTKB|Q4KFD8 [details] [associations]
            symbol:PFL_1926 "Uncharacterized protein" species:220664
            "Pseudomonas protegens Pf-5" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0008150 "biological_process" evidence=ND] EMBL:CP000076
            GenomeReviews:CP000076_GR eggNOG:COG3571 HOGENOM:HOG000244632
            KO:K07020 OMA:GYPFHPP RefSeq:YP_259045.1 ProteinModelPortal:Q4KFD8
            STRING:Q4KFD8 DNASU:3477617 GeneID:3477617 KEGG:pfl:PFL_1926
            PATRIC:19873093 ProtClustDB:CLSK909555
            BioCyc:PFLU220664:GIX8-1936-MONOMER Uniprot:Q4KFD8
        Length = 231

 Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
 Identities = 46/121 (38%), Positives = 70/121 (57%)

Query:    17 GDDTSSSPVVVFAHGAGAPSSSDWMIKWKDMLGK-ALDAVEVVTFDYPYIA-----GGKR 70
             G +  S+P ++ AHGAGAP  S +M    D+  + A   V V+ F++PY+A     GGKR
Sbjct:    30 GVEVQSAPTLILAHGAGAPMDSGFM---NDIAVRLAGHGVNVLRFEFPYMAQRRLDGGKR 86

Query:    71 KAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGY 130
                P A +L+E   +V    V  +    L L GKSMG R++ ++A  +++ A A++CLGY
Sbjct:    87 PPNP-APRLLECWREV-HALVRPYVTGVLALGGKSMGGRMASLLA--DELQADALVCLGY 142

Query:   131 P 131
             P
Sbjct:   143 P 143


>UNIPROTKB|Q8EGR1 [details] [associations]
            symbol:SO_1534 "Alpha/beta-hydrolase superfamily protein"
            species:211586 "Shewanella oneidensis MR-1" [GO:0003674
            "molecular_function" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            GO:GO:0016787 EMBL:AE014299 GenomeReviews:AE014299_GR
            HOGENOM:HOG000244632 KO:K07020 OMA:GYPFHPP RefSeq:NP_717150.1
            ProteinModelPortal:Q8EGR1 GeneID:1169342 KEGG:son:SO_1534
            PATRIC:23522710 ProtClustDB:CLSK906312 Uniprot:Q8EGR1
        Length = 215

 Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 40/116 (34%), Positives = 67/116 (57%)

Query:    22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAG----GKRKAPPKAE 77
             S  +++FAHGAGA   S +M +    LG A    +V+ F++PY+      GK++ P +A 
Sbjct:    18 SETLILFAHGAGANRDSAFMQQMT--LGLAAKGYQVMRFNFPYMQANALDGKKRPPDRAP 75

Query:    78 KLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAA--SAVLCLGYP 131
             KL+   +D+++ A  +     ++L GKSMG R++ ++AC     +    V+CLGYP
Sbjct:    76 KLLACFSDMLELAHKQPEVKRVVLMGKSMGGRMAALLACDSTQVSRIDRVICLGYP 131


>TIGR_CMR|SO_1534 [details] [associations]
            symbol:SO_1534 "conserved hypothetical protein"
            species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] [GO:0003674 "molecular_function"
            evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
            GO:GO:0016787 EMBL:AE014299 GenomeReviews:AE014299_GR
            HOGENOM:HOG000244632 KO:K07020 OMA:GYPFHPP RefSeq:NP_717150.1
            ProteinModelPortal:Q8EGR1 GeneID:1169342 KEGG:son:SO_1534
            PATRIC:23522710 ProtClustDB:CLSK906312 Uniprot:Q8EGR1
        Length = 215

 Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 40/116 (34%), Positives = 67/116 (57%)

Query:    22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAG----GKRKAPPKAE 77
             S  +++FAHGAGA   S +M +    LG A    +V+ F++PY+      GK++ P +A 
Sbjct:    18 SETLILFAHGAGANRDSAFMQQMT--LGLAAKGYQVMRFNFPYMQANALDGKKRPPDRAP 75

Query:    78 KLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAA--SAVLCLGYP 131
             KL+   +D+++ A  +     ++L GKSMG R++ ++AC     +    V+CLGYP
Sbjct:    76 KLLACFSDMLELAHKQPEVKRVVLMGKSMGGRMAALLACDSTQVSRIDRVICLGYP 131


>UNIPROTKB|Q47YA3 [details] [associations]
            symbol:CPS_3543 "Putative uncharacterized protein"
            species:167879 "Colwellia psychrerythraea 34H" [GO:0003674
            "molecular_function" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            EMBL:CP000083 GenomeReviews:CP000083_GR eggNOG:COG3571
            HOGENOM:HOG000244632 KO:K07020 RefSeq:YP_270217.1
            ProteinModelPortal:Q47YA3 STRING:Q47YA3 GeneID:3520580
            KEGG:cps:CPS_3543 PATRIC:21470019 OMA:GYPFHPP
            BioCyc:CPSY167879:GI48-3571-MONOMER Uniprot:Q47YA3
        Length = 236

 Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
 Identities = 40/124 (32%), Positives = 66/124 (53%)

Query:    21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYI----AGGKRKAPPKA 76
             ++  +V+FAHGAGA  S ++M +   +L      + V+ F++P++      GK+  P + 
Sbjct:    24 NAKALVIFAHGAGANMSHEFMNETSRLLNHL--GINVLRFNFPFMDKRALTGKKYPPDRM 81

Query:    77 EKLVEFHTDVVKGAVAKFPGH--PLILAGKSMGSRVSCMVACKEDIAASAVL-------C 127
              KL+  +  V++  V K   H  PL + GKSMGSRV+  +    D+  S +L       C
Sbjct:    82 PKLLLCYETVIEYVVDKKLSHQLPLFIGGKSMGSRVAASLVADSDLLKSRLLNHISGVFC 141

Query:   128 LGYP 131
             +GYP
Sbjct:   142 IGYP 145


>TIGR_CMR|CPS_3543 [details] [associations]
            symbol:CPS_3543 "conserved hypothetical protein"
            species:167879 "Colwellia psychrerythraea 34H" [GO:0003674
            "molecular_function" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            EMBL:CP000083 GenomeReviews:CP000083_GR eggNOG:COG3571
            HOGENOM:HOG000244632 KO:K07020 RefSeq:YP_270217.1
            ProteinModelPortal:Q47YA3 STRING:Q47YA3 GeneID:3520580
            KEGG:cps:CPS_3543 PATRIC:21470019 OMA:GYPFHPP
            BioCyc:CPSY167879:GI48-3571-MONOMER Uniprot:Q47YA3
        Length = 236

 Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
 Identities = 40/124 (32%), Positives = 66/124 (53%)

Query:    21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYI----AGGKRKAPPKA 76
             ++  +V+FAHGAGA  S ++M +   +L      + V+ F++P++      GK+  P + 
Sbjct:    24 NAKALVIFAHGAGANMSHEFMNETSRLLNHL--GINVLRFNFPFMDKRALTGKKYPPDRM 81

Query:    77 EKLVEFHTDVVKGAVAKFPGH--PLILAGKSMGSRVSCMVACKEDIAASAVL-------C 127
              KL+  +  V++  V K   H  PL + GKSMGSRV+  +    D+  S +L       C
Sbjct:    82 PKLLLCYETVIEYVVDKKLSHQLPLFIGGKSMGSRVAASLVADSDLLKSRLLNHISGVFC 141

Query:   128 LGYP 131
             +GYP
Sbjct:   142 IGYP 145


>UNIPROTKB|Q884T1 [details] [associations]
            symbol:PSPTO_2005 "Conserved domain protein" species:223283
            "Pseudomonas syringae pv. tomato str. DC3000" [GO:0003674
            "molecular_function" evidence=ND] EMBL:AE016853
            GenomeReviews:AE016853_GR eggNOG:COG3571 HOGENOM:HOG000244632
            KO:K07020 RefSeq:NP_791828.1 ProteinModelPortal:Q884T1
            GeneID:1183650 KEGG:pst:PSPTO_2005 PATRIC:19995286 OMA:QCLVESA
            ProtClustDB:CLSK423066 BioCyc:PSYR223283:GJIX-2045-MONOMER
            Uniprot:Q884T1
        Length = 330

 Score = 147 (56.8 bits), Expect = 7.6e-10, P = 7.6e-10
 Identities = 38/111 (34%), Positives = 62/111 (55%)

Query:    26 VVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIA----GGKRKAP-PKAEKLV 80
             ++ AHGAGAP  S++M      L  A   + V+ F++PY+A    GG ++ P P+A+ L 
Sbjct:   140 LLLAHGAGAPMDSEFMNSMAMHL--AAQGIGVLRFEFPYMAQRREGGSKRPPNPQAQLLA 197

Query:    81 EFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYP 131
              +    V   V       L + GKSMG R++ ++A  +++   A++CLGYP
Sbjct:   198 CWRE--VYAQVRPLVAGRLAVGGKSMGGRMASLIA--DELQVDALVCLGYP 244


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.135   0.427    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      154       154   0.00088  105 3  11 22  0.47    31
                                                     30  0.41    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  604 (64 KB)
  Total size of DFA:  161 KB (2095 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  16.24u 0.09s 16.33t   Elapsed:  00:00:01
  Total cpu time:  16.24u 0.09s 16.33t   Elapsed:  00:00:01
  Start:  Thu May  9 21:19:00 2013   End:  Thu May  9 21:19:01 2013

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