Query 031716
Match_columns 154
No_of_seqs 148 out of 1262
Neff 10.3
Searched_HMMs 46136
Date Fri Mar 29 04:22:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031716.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/031716hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02824 hydrolase, alpha/beta 99.8 5.2E-20 1.1E-24 132.5 11.1 106 22-132 28-137 (294)
2 KOG4409 Predicted hydrolase/ac 99.8 5.9E-20 1.3E-24 131.2 9.7 108 20-132 87-195 (365)
3 TIGR02240 PHA_depoly_arom poly 99.8 1.2E-19 2.6E-24 129.6 10.5 103 22-132 24-126 (276)
4 PRK00870 haloalkane dehalogena 99.8 3.7E-19 8E-24 128.6 11.9 105 22-132 45-150 (302)
5 PRK11126 2-succinyl-6-hydroxy- 99.8 1.8E-18 3.9E-23 121.0 11.9 100 23-132 2-102 (242)
6 PRK10673 acyl-CoA esterase; Pr 99.8 1.6E-18 3.5E-23 122.0 11.5 104 18-130 11-114 (255)
7 PLN02965 Probable pheophorbida 99.8 1.5E-18 3.2E-23 122.7 11.3 101 24-131 4-106 (255)
8 PRK03592 haloalkane dehalogena 99.8 1.8E-18 3.8E-23 124.6 11.7 102 22-131 26-127 (295)
9 PLN03084 alpha/beta hydrolase 99.8 1.1E-18 2.3E-23 129.6 10.7 108 21-133 125-233 (383)
10 PF12697 Abhydrolase_6: Alpha/ 99.8 9E-19 2E-23 119.9 9.6 103 26-134 1-103 (228)
11 PHA02857 monoglyceride lipase; 99.8 8.7E-18 1.9E-22 119.8 12.9 109 20-133 22-133 (276)
12 TIGR03343 biphenyl_bphD 2-hydr 99.8 7.8E-18 1.7E-22 120.2 11.8 106 22-131 29-135 (282)
13 PLN02385 hydrolase; alpha/beta 99.8 1.6E-17 3.5E-22 122.4 13.7 108 21-132 85-197 (349)
14 PLN02679 hydrolase, alpha/beta 99.8 5.5E-18 1.2E-22 125.4 11.0 102 23-131 88-190 (360)
15 TIGR03611 RutD pyrimidine util 99.8 3.9E-18 8.5E-23 119.4 9.6 104 21-131 11-114 (257)
16 PLN02211 methyl indole-3-aceta 99.8 1.2E-17 2.7E-22 119.2 11.9 109 16-131 11-121 (273)
17 PRK03204 haloalkane dehalogena 99.8 8.6E-18 1.9E-22 120.8 11.1 104 22-132 33-136 (286)
18 TIGR02427 protocat_pcaD 3-oxoa 99.8 3.3E-18 7.2E-23 118.9 8.3 103 22-132 12-114 (251)
19 TIGR03695 menH_SHCHC 2-succiny 99.8 1.9E-17 4.1E-22 114.8 12.0 103 23-131 1-104 (251)
20 PLN02894 hydrolase, alpha/beta 99.8 2E-17 4.4E-22 123.9 12.9 107 20-131 102-210 (402)
21 PRK10349 carboxylesterase BioH 99.8 1.4E-17 3.1E-22 117.6 11.5 97 22-131 12-108 (256)
22 PRK10749 lysophospholipase L2; 99.8 2.2E-17 4.9E-22 120.8 12.7 107 21-132 52-166 (330)
23 PLN02578 hydrolase 99.8 9.9E-18 2.1E-22 123.8 10.8 102 22-131 85-186 (354)
24 TIGR03056 bchO_mg_che_rel puta 99.8 1.5E-17 3.2E-22 118.1 11.4 104 22-132 27-130 (278)
25 KOG4178 Soluble epoxide hydrol 99.8 1.4E-17 2.9E-22 118.6 10.9 110 18-133 39-149 (322)
26 TIGR01250 pro_imino_pep_2 prol 99.8 3.2E-17 6.9E-22 116.3 12.6 107 22-131 24-130 (288)
27 TIGR03101 hydr2_PEP hydrolase, 99.8 4.9E-17 1.1E-21 115.2 13.4 113 21-135 23-137 (266)
28 PLN02298 hydrolase, alpha/beta 99.7 4.1E-17 8.8E-22 119.3 13.4 107 22-132 58-169 (330)
29 PLN03087 BODYGUARD 1 domain co 99.7 6.8E-17 1.5E-21 122.7 11.9 107 23-132 201-309 (481)
30 COG2267 PldB Lysophospholipase 99.7 1E-16 2.2E-21 115.6 11.9 106 24-135 35-145 (298)
31 TIGR01738 bioH putative pimelo 99.7 5.3E-17 1.1E-21 112.6 10.1 97 22-131 3-99 (245)
32 PRK06489 hypothetical protein; 99.7 5.5E-17 1.2E-21 120.1 10.4 108 23-131 69-188 (360)
33 PLN02511 hydrolase 99.7 2.8E-16 6E-21 117.3 13.2 111 21-133 98-211 (388)
34 PRK10985 putative hydrolase; P 99.7 3E-16 6.5E-21 114.6 13.1 111 22-134 57-170 (324)
35 KOG1455 Lysophospholipase [Lip 99.7 4E-16 8.6E-21 109.9 12.4 111 21-134 52-166 (313)
36 PRK14875 acetoin dehydrogenase 99.7 3.2E-16 7E-21 116.0 12.0 103 21-131 129-231 (371)
37 KOG1454 Predicted hydrolase/ac 99.7 1.2E-16 2.5E-21 116.5 9.4 107 21-133 56-167 (326)
38 TIGR01249 pro_imino_pep_1 prol 99.7 4E-16 8.7E-21 113.1 11.3 105 22-132 26-130 (306)
39 TIGR01392 homoserO_Ac_trn homo 99.7 1.9E-16 4E-21 116.9 9.3 111 22-132 30-162 (351)
40 PLN02652 hydrolase; alpha/beta 99.7 2.1E-15 4.6E-20 112.7 12.1 107 20-132 133-245 (395)
41 PRK00175 metX homoserine O-ace 99.6 1.3E-15 2.8E-20 113.5 9.5 109 23-132 48-182 (379)
42 PRK08775 homoserine O-acetyltr 99.6 2.1E-15 4.6E-20 110.9 10.4 102 25-132 59-173 (343)
43 PLN02980 2-oxoglutarate decarb 99.6 2.6E-15 5.7E-20 127.8 11.2 104 22-130 1370-1478(1655)
44 TIGR01607 PST-A Plasmodium sub 99.6 8.7E-15 1.9E-19 107.3 12.5 110 21-132 19-185 (332)
45 TIGR03230 lipo_lipase lipoprot 99.6 2E-14 4.4E-19 107.8 14.0 112 21-134 39-156 (442)
46 PRK11071 esterase YqiA; Provis 99.6 9.8E-15 2.1E-19 99.1 11.2 92 24-133 2-94 (190)
47 cd00707 Pancreat_lipase_like P 99.6 1.1E-14 2.4E-19 104.1 11.9 112 20-135 33-150 (275)
48 PRK07581 hypothetical protein; 99.6 1.7E-15 3.8E-20 111.2 7.5 106 22-132 40-159 (339)
49 COG1647 Esterase/lipase [Gener 99.6 1.8E-14 3.9E-19 97.4 10.9 105 23-136 15-122 (243)
50 PRK10566 esterase; Provisional 99.6 5.2E-14 1.1E-18 99.0 12.5 105 21-129 25-139 (249)
51 PRK05855 short chain dehydroge 99.6 1.7E-14 3.6E-19 112.4 10.1 106 20-131 22-130 (582)
52 TIGR03100 hydr1_PEP hydrolase, 99.6 1.8E-13 3.9E-18 97.9 13.6 110 22-134 25-136 (274)
53 PRK05077 frsA fermentation/res 99.5 1.4E-13 3E-18 103.6 12.6 107 21-133 192-301 (414)
54 KOG2564 Predicted acetyltransf 99.5 1.4E-13 3E-18 96.1 11.0 103 20-130 71-180 (343)
55 TIGR01840 esterase_phb esteras 99.5 1.4E-13 3.1E-18 94.9 11.0 109 21-132 11-130 (212)
56 PF12695 Abhydrolase_5: Alpha/ 99.5 4E-13 8.7E-18 86.8 11.8 94 25-131 1-94 (145)
57 PRK13604 luxD acyl transferase 99.5 2.6E-13 5.7E-18 97.4 11.2 106 21-133 35-142 (307)
58 PLN00021 chlorophyllase 99.5 4.2E-13 9.2E-18 97.4 12.1 106 19-132 48-166 (313)
59 TIGR01836 PHA_synth_III_C poly 99.5 1.8E-13 4E-18 101.0 9.2 108 23-134 62-173 (350)
60 COG3571 Predicted hydrolase of 99.5 1E-12 2.3E-17 84.9 11.2 112 22-135 13-127 (213)
61 TIGR02821 fghA_ester_D S-formy 99.4 4.4E-12 9.6E-17 90.8 13.3 110 20-132 39-173 (275)
62 PF07819 PGAP1: PGAP1-like pro 99.4 4.6E-12 9.9E-17 88.1 12.4 112 22-136 3-127 (225)
63 PLN02442 S-formylglutathione h 99.4 5E-12 1.1E-16 90.9 13.0 111 20-133 44-179 (283)
64 PF00561 Abhydrolase_1: alpha/ 99.4 7.5E-13 1.6E-17 91.3 8.0 77 55-131 1-78 (230)
65 PF00975 Thioesterase: Thioest 99.4 6E-12 1.3E-16 87.4 11.1 102 24-134 1-106 (229)
66 COG0429 Predicted hydrolase of 99.4 9.2E-12 2E-16 89.1 11.7 113 20-134 72-187 (345)
67 COG0596 MhpC Predicted hydrola 99.4 8.3E-12 1.8E-16 86.4 11.1 104 23-133 21-124 (282)
68 KOG1838 Alpha/beta hydrolase [ 99.4 1.9E-11 4E-16 90.2 12.4 112 21-134 123-237 (409)
69 KOG2382 Predicted alpha/beta h 99.4 1.1E-11 2.4E-16 88.6 10.2 102 20-130 49-157 (315)
70 COG2945 Predicted hydrolase of 99.3 3.2E-11 6.9E-16 80.2 10.9 110 20-133 25-138 (210)
71 TIGR00976 /NonD putative hydro 99.3 1.1E-11 2.4E-16 96.6 9.9 112 20-133 19-133 (550)
72 KOG1552 Predicted alpha/beta h 99.3 2.8E-11 6.1E-16 83.9 10.3 103 21-132 58-163 (258)
73 PRK06765 homoserine O-acetyltr 99.3 8.2E-12 1.8E-16 93.3 8.2 111 21-131 54-195 (389)
74 PF06342 DUF1057: Alpha/beta h 99.3 7.2E-11 1.6E-15 83.1 12.2 112 19-138 31-143 (297)
75 PRK11460 putative hydrolase; P 99.3 8.4E-11 1.8E-15 82.2 12.4 111 20-132 13-138 (232)
76 TIGR01838 PHA_synth_I poly(R)- 99.3 6.9E-11 1.5E-15 91.1 12.1 111 22-136 187-306 (532)
77 PF02230 Abhydrolase_2: Phosph 99.3 7.3E-11 1.6E-15 81.6 10.6 114 18-136 9-144 (216)
78 COG0400 Predicted esterase [Ge 99.3 7.4E-11 1.6E-15 80.7 9.9 111 19-135 14-137 (207)
79 PF07859 Abhydrolase_3: alpha/ 99.3 4.3E-11 9.3E-16 82.2 8.7 99 26-132 1-110 (211)
80 KOG4391 Predicted alpha/beta h 99.3 1.3E-11 2.9E-16 83.6 5.8 106 18-128 73-180 (300)
81 PF10230 DUF2305: Uncharacteri 99.3 2.3E-10 4.9E-15 81.6 12.5 111 23-135 2-125 (266)
82 PRK10162 acetyl esterase; Prov 99.2 1.1E-10 2.4E-15 85.2 10.6 105 21-133 79-196 (318)
83 PF12740 Chlorophyllase2: Chlo 99.2 1.8E-10 4E-15 80.8 10.7 104 18-132 12-131 (259)
84 TIGR03502 lipase_Pla1_cef extr 99.2 1.6E-10 3.4E-15 92.1 11.2 91 22-117 448-575 (792)
85 KOG2984 Predicted hydrolase [G 99.2 2.1E-11 4.6E-16 81.7 5.2 113 18-132 37-149 (277)
86 PLN02872 triacylglycerol lipas 99.2 1.7E-11 3.7E-16 91.6 5.3 105 22-131 73-196 (395)
87 PF05728 UPF0227: Uncharacteri 99.2 5E-10 1.1E-14 75.6 11.1 94 26-136 2-95 (187)
88 PF05990 DUF900: Alpha/beta hy 99.2 8.2E-10 1.8E-14 77.2 12.2 114 20-134 15-139 (233)
89 PF00151 Lipase: Lipase; Inte 99.1 5E-10 1.1E-14 82.0 9.8 115 20-136 68-191 (331)
90 PF06821 Ser_hydrolase: Serine 99.1 4.4E-10 9.6E-15 75.0 8.7 91 26-133 1-92 (171)
91 KOG1515 Arylacetamide deacetyl 99.1 1.2E-09 2.5E-14 79.8 11.3 115 21-137 88-212 (336)
92 PF06500 DUF1100: Alpha/beta h 99.1 1.8E-10 4E-15 85.5 6.9 112 18-135 185-299 (411)
93 COG0657 Aes Esterase/lipase [L 99.1 9.1E-10 2E-14 80.2 10.2 106 22-135 78-194 (312)
94 PF03096 Ndr: Ndr family; Int 99.1 3.6E-10 7.8E-15 80.1 7.4 113 21-133 21-135 (283)
95 PRK07868 acyl-CoA synthetase; 99.1 8.5E-10 1.8E-14 91.3 10.7 108 22-134 66-179 (994)
96 COG2021 MET2 Homoserine acetyl 99.1 3.1E-10 6.7E-15 82.5 7.1 114 21-134 49-184 (368)
97 PF10503 Esterase_phd: Esteras 99.1 2.1E-09 4.6E-14 74.3 10.8 108 21-131 14-131 (220)
98 COG3319 Thioesterase domains o 99.1 2.2E-09 4.8E-14 75.7 10.9 101 24-133 1-104 (257)
99 PF05057 DUF676: Putative seri 99.1 1.3E-09 2.9E-14 75.5 9.6 115 21-137 2-130 (217)
100 PF01674 Lipase_2: Lipase (cla 99.1 4.4E-10 9.6E-15 77.5 7.1 88 24-117 2-95 (219)
101 PF07224 Chlorophyllase: Chlor 99.1 2.6E-09 5.7E-14 74.4 10.5 109 15-131 38-156 (307)
102 PF00326 Peptidase_S9: Prolyl 99.0 1.9E-09 4.2E-14 74.2 8.7 83 53-135 13-102 (213)
103 KOG4667 Predicted esterase [Li 99.0 5.9E-09 1.3E-13 70.8 10.5 112 20-135 30-142 (269)
104 KOG2931 Differentiation-relate 99.0 3.4E-09 7.3E-14 74.9 9.8 111 21-131 44-156 (326)
105 COG4782 Uncharacterized protei 99.0 6.4E-09 1.4E-13 75.5 11.4 113 21-134 114-236 (377)
106 COG3208 GrsT Predicted thioest 99.0 4.5E-09 9.7E-14 72.6 10.0 101 21-129 5-109 (244)
107 COG1506 DAP2 Dipeptidyl aminop 99.0 1.9E-09 4.1E-14 85.2 9.1 106 23-132 394-507 (620)
108 PLN02733 phosphatidylcholine-s 99.0 2.6E-09 5.6E-14 80.8 8.8 92 43-136 109-205 (440)
109 PF01738 DLH: Dienelactone hyd 98.9 2.4E-08 5.2E-13 69.1 10.7 105 21-130 12-130 (218)
110 PF06028 DUF915: Alpha/beta hy 98.9 2.3E-08 5.1E-13 70.6 10.7 110 22-136 10-147 (255)
111 PF10340 DUF2424: Protein of u 98.9 4.7E-08 1E-12 72.1 12.5 112 21-135 120-238 (374)
112 COG0412 Dienelactone hydrolase 98.9 5E-08 1.1E-12 68.4 12.2 104 21-130 25-144 (236)
113 PF03403 PAF-AH_p_II: Platelet 98.9 5.5E-09 1.2E-13 77.9 7.4 108 21-134 98-264 (379)
114 PRK10252 entF enterobactin syn 98.9 2.5E-08 5.5E-13 84.6 12.0 99 22-130 1067-1169(1296)
115 PRK10115 protease 2; Provision 98.9 1.3E-08 2.9E-13 81.2 9.7 112 20-134 442-561 (686)
116 PF02129 Peptidase_S15: X-Pro 98.8 4.8E-08 1E-12 69.9 10.0 116 19-136 16-140 (272)
117 COG3545 Predicted esterase of 98.8 7.1E-08 1.5E-12 63.5 8.8 95 24-135 3-97 (181)
118 TIGR01839 PHA_synth_II poly(R) 98.8 1.1E-07 2.3E-12 73.5 11.0 110 22-136 214-332 (560)
119 KOG2565 Predicted hydrolases o 98.8 3.7E-08 8E-13 71.8 7.7 97 23-126 152-258 (469)
120 PF08538 DUF1749: Protein of u 98.8 2E-07 4.4E-12 66.9 11.0 107 22-133 32-149 (303)
121 PF05448 AXE1: Acetyl xylan es 98.8 1.5E-07 3.2E-12 68.9 10.6 109 19-133 79-210 (320)
122 PF12715 Abhydrolase_7: Abhydr 98.7 6.7E-08 1.5E-12 71.1 8.3 110 20-133 112-261 (390)
123 PRK10439 enterobactin/ferric e 98.7 4.3E-07 9.4E-12 68.6 12.3 111 21-132 207-323 (411)
124 cd00312 Esterase_lipase Estera 98.7 8E-08 1.7E-12 74.1 8.3 112 20-132 92-213 (493)
125 PRK04940 hypothetical protein; 98.7 2.9E-07 6.3E-12 61.5 9.6 95 26-136 2-96 (180)
126 PF12146 Hydrolase_4: Putative 98.7 5.8E-08 1.3E-12 56.5 5.5 63 22-91 15-78 (79)
127 COG3509 LpqC Poly(3-hydroxybut 98.7 2.3E-07 5E-12 65.9 9.2 110 21-132 59-179 (312)
128 PF05677 DUF818: Chlamydia CHL 98.6 5.7E-07 1.2E-11 65.2 10.4 95 20-118 134-236 (365)
129 PF00756 Esterase: Putative es 98.6 7.2E-08 1.6E-12 67.9 5.5 35 99-133 117-151 (251)
130 COG3458 Acetyl esterase (deace 98.6 8.1E-08 1.8E-12 67.4 5.6 106 21-132 81-210 (321)
131 PF05577 Peptidase_S28: Serine 98.6 5.8E-07 1.3E-11 68.4 10.6 112 22-136 28-152 (434)
132 COG4099 Predicted peptidase [G 98.6 4.1E-07 8.9E-12 64.8 8.8 103 23-133 191-305 (387)
133 COG1075 LipA Predicted acetylt 98.6 2.7E-07 5.8E-12 68.0 8.1 106 23-137 59-169 (336)
134 PLN02633 palmitoyl protein thi 98.5 2.3E-06 5.1E-11 61.5 11.4 113 21-138 23-137 (314)
135 PF00135 COesterase: Carboxyle 98.5 4.9E-07 1.1E-11 70.1 8.7 107 22-130 124-243 (535)
136 PF02450 LCAT: Lecithin:choles 98.5 8.2E-07 1.8E-11 66.7 9.3 88 44-139 67-167 (389)
137 KOG4627 Kynurenine formamidase 98.5 4.7E-07 1E-11 61.3 6.8 105 20-130 64-170 (270)
138 COG4814 Uncharacterized protei 98.5 1.9E-06 4.1E-11 60.1 9.6 106 23-133 45-177 (288)
139 KOG1553 Predicted alpha/beta h 98.5 6.7E-07 1.4E-11 65.0 7.6 98 22-129 242-342 (517)
140 COG3150 Predicted esterase [Ge 98.5 2.3E-06 4.9E-11 56.1 9.2 92 26-134 2-93 (191)
141 COG4757 Predicted alpha/beta h 98.5 1.8E-06 3.9E-11 59.5 9.0 92 22-116 28-124 (281)
142 KOG2112 Lysophospholipase [Lip 98.5 3.6E-06 7.7E-11 57.1 10.3 106 23-133 3-129 (206)
143 PF06057 VirJ: Bacterial virul 98.5 2.9E-06 6.3E-11 57.0 9.3 101 24-132 3-107 (192)
144 COG2272 PnbA Carboxylesterase 98.4 7.1E-07 1.5E-11 67.5 6.9 113 19-133 90-218 (491)
145 PLN02606 palmitoyl-protein thi 98.4 9.4E-06 2E-10 58.4 11.9 111 23-139 26-139 (306)
146 KOG2624 Triglyceride lipase-ch 98.4 8.5E-07 1.8E-11 66.4 6.9 109 21-132 71-199 (403)
147 smart00824 PKS_TE Thioesterase 98.4 6.8E-06 1.5E-10 55.7 10.8 85 43-131 14-101 (212)
148 PF09752 DUF2048: Uncharacteri 98.4 8E-06 1.7E-10 59.8 10.9 110 21-133 90-211 (348)
149 PF02089 Palm_thioest: Palmito 98.4 2.3E-06 4.9E-11 61.0 7.8 112 23-138 5-122 (279)
150 KOG3253 Predicted alpha/beta h 98.4 1.2E-06 2.6E-11 67.6 6.7 110 22-136 175-290 (784)
151 COG4188 Predicted dienelactone 98.3 3.5E-06 7.5E-11 61.9 8.3 93 21-117 69-179 (365)
152 PF03959 FSH1: Serine hydrolas 98.3 2.6E-06 5.7E-11 58.8 7.3 111 22-134 3-147 (212)
153 KOG3975 Uncharacterized conser 98.3 2.2E-05 4.7E-10 54.8 11.3 114 18-133 24-148 (301)
154 KOG2281 Dipeptidyl aminopeptid 98.3 2E-06 4.4E-11 66.9 6.7 115 18-133 637-762 (867)
155 PF12048 DUF3530: Protein of u 98.3 8.1E-05 1.8E-09 54.4 14.6 114 20-135 84-232 (310)
156 TIGR01849 PHB_depoly_PhaZ poly 98.3 4.6E-06 1E-10 62.7 8.1 105 24-136 103-212 (406)
157 KOG2100 Dipeptidyl aminopeptid 98.3 4.8E-06 1E-10 67.3 8.5 113 20-133 523-645 (755)
158 PRK05371 x-prolyl-dipeptidyl a 98.3 1.1E-05 2.4E-10 65.5 10.3 85 44-130 271-371 (767)
159 KOG3724 Negative regulator of 98.2 9.7E-06 2.1E-10 64.5 9.2 109 22-134 88-222 (973)
160 cd00741 Lipase Lipase. Lipase 98.2 8.4E-06 1.8E-10 53.3 7.2 58 80-137 11-72 (153)
161 PF06259 Abhydrolase_8: Alpha/ 98.2 9.5E-05 2.1E-09 49.6 12.1 116 20-135 16-147 (177)
162 PF01083 Cutinase: Cutinase; 98.2 3.7E-05 8.1E-10 51.7 10.2 109 25-134 7-124 (179)
163 KOG3847 Phospholipase A2 (plat 98.2 1.6E-05 3.5E-10 57.2 8.8 107 20-132 115-275 (399)
164 PTZ00472 serine carboxypeptida 98.2 9.9E-06 2.1E-10 62.2 8.3 111 20-132 74-216 (462)
165 KOG3101 Esterase D [General fu 98.1 2.7E-06 5.9E-11 57.9 3.7 111 19-132 40-176 (283)
166 KOG3967 Uncharacterized conser 98.0 0.00012 2.7E-09 50.1 9.8 111 22-132 100-227 (297)
167 KOG2183 Prolylcarboxypeptidase 98.0 5.3E-05 1.1E-09 56.5 8.2 111 24-137 81-207 (492)
168 KOG2541 Palmitoyl protein thio 98.0 0.00023 5E-09 50.3 10.8 108 24-138 24-134 (296)
169 PF11288 DUF3089: Protein of u 98.0 0.0001 2.2E-09 50.5 8.7 85 50-134 41-138 (207)
170 PF03583 LIP: Secretory lipase 98.0 0.00014 3.1E-09 52.7 10.0 79 51-133 23-114 (290)
171 COG0627 Predicted esterase [Ge 97.9 7.9E-05 1.7E-09 54.4 8.5 116 20-137 51-192 (316)
172 COG3243 PhaC Poly(3-hydroxyalk 97.9 5.2E-05 1.1E-09 56.7 7.4 113 23-138 107-223 (445)
173 PF01764 Lipase_3: Lipase (cla 97.9 5E-05 1.1E-09 48.7 6.5 39 79-117 46-84 (140)
174 PF02273 Acyl_transf_2: Acyl t 97.7 0.00023 5.1E-09 49.8 7.6 101 21-129 28-131 (294)
175 cd00519 Lipase_3 Lipase (class 97.7 0.00018 3.8E-09 50.2 6.7 56 79-135 110-170 (229)
176 PLN02517 phosphatidylcholine-s 97.7 0.00018 3.8E-09 56.3 7.1 90 44-137 158-268 (642)
177 KOG2369 Lecithin:cholesterol a 97.7 0.00011 2.3E-09 55.7 5.5 89 43-135 125-228 (473)
178 KOG3043 Predicted hydrolase re 97.6 0.00038 8.1E-09 48.0 7.1 105 23-132 39-154 (242)
179 PF11144 DUF2920: Protein of u 97.6 0.0012 2.6E-08 49.5 10.2 36 97-132 184-219 (403)
180 KOG2182 Hydrolytic enzymes of 97.6 0.0018 3.9E-08 49.6 10.9 118 20-140 83-215 (514)
181 COG2819 Predicted hydrolase of 97.6 0.0003 6.4E-09 49.8 6.2 60 77-136 114-176 (264)
182 COG2382 Fes Enterochelin ester 97.5 0.00036 7.8E-09 50.1 6.4 112 20-132 95-212 (299)
183 PF11187 DUF2974: Protein of u 97.5 0.00047 1E-08 48.1 6.7 48 84-132 72-123 (224)
184 PF08840 BAAT_C: BAAT / Acyl-C 97.5 0.00033 7.2E-09 48.5 5.9 52 83-135 6-59 (213)
185 KOG1516 Carboxylesterase and r 97.4 0.00063 1.4E-08 53.4 7.4 106 23-129 112-229 (545)
186 PLN02162 triacylglycerol lipas 97.4 0.00064 1.4E-08 51.8 7.0 57 81-137 262-326 (475)
187 COG3946 VirJ Type IV secretory 97.4 0.0022 4.8E-08 48.0 9.3 86 21-115 258-344 (456)
188 PLN00413 triacylglycerol lipas 97.4 0.00069 1.5E-08 51.7 6.9 57 81-137 268-332 (479)
189 PF00450 Peptidase_S10: Serine 97.4 0.0041 8.8E-08 47.0 10.9 109 20-134 37-183 (415)
190 PLN02454 triacylglycerol lipas 97.4 0.00098 2.1E-08 50.3 7.1 57 79-136 208-274 (414)
191 PF07082 DUF1350: Protein of u 97.4 0.008 1.7E-07 42.3 11.1 106 19-130 13-123 (250)
192 PF11339 DUF3141: Protein of u 97.3 0.005 1.1E-07 47.6 10.8 87 46-136 92-179 (581)
193 COG2936 Predicted acyl esteras 97.3 0.00069 1.5E-08 52.8 6.0 116 18-133 40-160 (563)
194 KOG2237 Predicted serine prote 97.2 0.00037 8E-09 54.7 3.9 107 20-129 467-581 (712)
195 KOG4840 Predicted hydrolases o 97.2 0.002 4.3E-08 44.6 6.5 106 23-134 36-146 (299)
196 PLN02934 triacylglycerol lipas 97.1 0.0021 4.5E-08 49.6 6.5 58 80-137 304-369 (515)
197 KOG4388 Hormone-sensitive lipa 97.1 0.0045 9.8E-08 48.5 8.3 106 20-133 393-509 (880)
198 PLN02408 phospholipase A1 97.1 0.0024 5.1E-08 47.6 6.4 57 80-136 181-244 (365)
199 PLN02571 triacylglycerol lipas 97.0 0.0033 7.1E-08 47.5 6.8 39 79-117 206-246 (413)
200 COG1770 PtrB Protease II [Amin 96.9 0.0041 8.9E-08 49.2 6.8 109 20-131 445-561 (682)
201 PLN02310 triacylglycerol lipas 96.9 0.0041 9E-08 46.9 6.4 56 81-136 189-252 (405)
202 PLN02324 triacylglycerol lipas 96.8 0.0058 1.2E-07 46.2 6.6 39 79-117 195-235 (415)
203 PLN02802 triacylglycerol lipas 96.8 0.0058 1.3E-07 47.2 6.7 57 81-137 312-375 (509)
204 KOG2551 Phospholipase/carboxyh 96.7 0.011 2.4E-07 40.9 6.7 90 22-116 4-123 (230)
205 PLN03037 lipase class 3 family 96.6 0.0079 1.7E-07 46.6 6.4 57 81-137 298-363 (525)
206 KOG4372 Predicted alpha/beta h 96.5 0.0027 5.9E-08 47.5 3.0 89 20-116 77-169 (405)
207 PLN02719 triacylglycerol lipas 96.4 0.014 3.1E-07 45.2 6.6 38 80-117 276-318 (518)
208 PF05277 DUF726: Protein of un 96.2 0.015 3.2E-07 43.2 5.7 41 95-135 218-263 (345)
209 KOG4569 Predicted lipase [Lipi 96.2 0.02 4.3E-07 42.5 6.5 55 81-135 155-215 (336)
210 PLN02761 lipase class 3 family 96.2 0.019 4.1E-07 44.6 6.4 38 80-117 271-314 (527)
211 PLN02753 triacylglycerol lipas 96.2 0.011 2.3E-07 46.0 4.9 39 79-117 289-332 (531)
212 PF08237 PE-PPE: PE-PPE domain 96.2 0.067 1.4E-06 37.4 8.4 81 54-134 2-91 (225)
213 PLN02847 triacylglycerol lipas 96.0 0.02 4.4E-07 45.2 5.6 32 86-117 240-271 (633)
214 PLN03016 sinapoylglucose-malat 95.9 0.095 2.1E-06 40.3 8.8 110 20-131 63-209 (433)
215 PF04301 DUF452: Protein of un 95.9 0.069 1.5E-06 37.0 7.3 77 22-129 10-87 (213)
216 PF05705 DUF829: Eukaryotic pr 95.9 0.15 3.2E-06 35.8 9.2 100 26-134 2-114 (240)
217 KOG4540 Putative lipase essent 95.5 0.056 1.2E-06 39.1 6.0 37 83-119 262-298 (425)
218 COG5153 CVT17 Putative lipase 95.5 0.056 1.2E-06 39.1 6.0 37 83-119 262-298 (425)
219 COG1505 Serine proteases of th 95.4 0.016 3.4E-07 45.6 3.1 111 22-135 420-537 (648)
220 KOG1282 Serine carboxypeptidas 95.2 0.27 5.9E-06 38.0 9.0 93 19-117 69-188 (454)
221 PLN02209 serine carboxypeptida 95.0 0.3 6.5E-06 37.7 9.0 111 20-132 65-212 (437)
222 PF05576 Peptidase_S37: PS-10 95.0 0.075 1.6E-06 40.3 5.5 109 18-133 58-170 (448)
223 COG2939 Carboxypeptidase C (ca 94.7 0.25 5.5E-06 38.4 7.8 108 20-133 98-237 (498)
224 KOG2029 Uncharacterized conser 94.3 0.2 4.3E-06 39.8 6.4 40 96-135 525-575 (697)
225 COG4947 Uncharacterized protei 94.1 0.44 9.6E-06 32.0 6.9 52 81-133 85-137 (227)
226 PF09994 DUF2235: Uncharacteri 93.9 1.1 2.3E-05 32.5 9.3 37 81-117 75-112 (277)
227 KOG1202 Animal-type fatty acid 93.7 0.55 1.2E-05 40.7 8.2 95 20-130 2120-2217(2376)
228 PF07519 Tannase: Tannase and 93.4 0.23 5.1E-06 38.7 5.5 88 47-135 52-153 (474)
229 KOG1283 Serine carboxypeptidas 92.2 0.81 1.8E-05 33.8 6.4 96 21-117 29-142 (414)
230 PF10081 Abhydrolase_9: Alpha/ 91.9 3.7 8E-05 29.8 11.0 82 53-134 60-149 (289)
231 TIGR03712 acc_sec_asp2 accesso 91.8 3.3 7.2E-05 32.4 9.6 104 18-133 284-390 (511)
232 COG3673 Uncharacterized conser 91.7 4.3 9.3E-05 30.2 12.1 98 20-117 28-142 (423)
233 PLN02213 sinapoylglucose-malat 91.6 1.3 2.9E-05 32.6 7.3 62 56-117 3-71 (319)
234 KOG1551 Uncharacterized conser 91.4 1.2 2.6E-05 32.2 6.4 104 19-130 109-228 (371)
235 KOG4389 Acetylcholinesterase/B 91.0 0.56 1.2E-05 36.6 4.8 91 21-112 133-233 (601)
236 COG4553 DepA Poly-beta-hydroxy 90.4 4.2 9.1E-05 29.9 8.5 107 20-134 100-211 (415)
237 PRK12467 peptide synthase; Pro 89.5 5.1 0.00011 39.5 10.6 99 22-129 3691-3792(3956)
238 KOG2385 Uncharacterized conser 89.3 1.7 3.7E-05 34.2 6.2 47 94-140 444-495 (633)
239 KOG2521 Uncharacterized conser 87.2 6.7 0.00015 29.5 8.1 109 20-133 35-153 (350)
240 PF04083 Abhydro_lipase: Parti 87.2 0.6 1.3E-05 25.7 2.1 17 20-36 40-56 (63)
241 PF06441 EHN: Epoxide hydrolas 84.5 0.48 1E-05 29.4 0.9 18 19-36 88-105 (112)
242 PF06309 Torsin: Torsin; Inte 84.4 8.3 0.00018 24.5 8.1 29 19-47 48-76 (127)
243 PF09949 DUF2183: Uncharacteri 82.5 6.8 0.00015 23.8 5.3 44 84-127 52-97 (100)
244 PF03283 PAE: Pectinacetyleste 78.1 7.5 0.00016 29.4 5.5 36 82-117 139-176 (361)
245 COG3887 Predicted signaling pr 73.8 14 0.0003 29.9 6.0 63 64-129 307-375 (655)
246 PF12242 Eno-Rase_NADH_b: NAD( 71.0 15 0.00032 21.2 4.2 40 79-118 19-61 (78)
247 KOG2170 ATPase of the AAA+ sup 70.9 37 0.00079 25.3 7.1 31 19-49 105-135 (344)
248 PF08484 Methyltransf_14: C-me 69.1 26 0.00056 23.2 5.8 49 79-127 49-99 (160)
249 PRK10824 glutaredoxin-4; Provi 68.8 26 0.00055 21.9 9.3 81 21-118 13-93 (115)
250 PF02590 SPOUT_MTase: Predicte 68.5 20 0.00043 23.6 5.1 53 44-107 57-109 (155)
251 COG1576 Uncharacterized conser 67.1 27 0.00058 23.1 5.4 59 43-113 56-114 (155)
252 COG4425 Predicted membrane pro 65.3 49 0.0011 26.1 7.1 80 53-134 348-437 (588)
253 PF00698 Acyl_transf_1: Acyl t 64.3 6.7 0.00014 28.8 2.5 28 89-116 76-103 (318)
254 smart00827 PKS_AT Acyl transfe 63.5 11 0.00024 27.2 3.5 25 92-116 77-101 (298)
255 TIGR03131 malonate_mdcH malona 62.5 12 0.00026 27.1 3.5 25 92-116 71-95 (295)
256 PF00091 Tubulin: Tubulin/FtsZ 61.9 37 0.00081 23.4 5.8 33 79-111 106-138 (216)
257 COG3933 Transcriptional antite 61.2 60 0.0013 25.5 7.0 78 21-116 107-184 (470)
258 cd07198 Patatin Patatin-like p 60.3 16 0.00034 24.2 3.6 34 84-118 14-47 (172)
259 COG2240 PdxK Pyridoxal/pyridox 59.8 66 0.0014 23.5 7.3 100 29-141 11-122 (281)
260 TIGR00128 fabD malonyl CoA-acy 58.8 14 0.0003 26.5 3.3 24 93-116 78-102 (290)
261 cd07207 Pat_ExoU_VipD_like Exo 58.1 18 0.0004 24.2 3.7 34 84-118 15-48 (194)
262 COG0331 FabD (acyl-carrier-pro 57.9 15 0.00033 27.2 3.3 30 87-116 74-104 (310)
263 PRK00103 rRNA large subunit me 56.5 55 0.0012 21.6 5.6 52 45-107 58-109 (157)
264 cd07225 Pat_PNPLA6_PNPLA7 Pata 56.5 19 0.00042 26.5 3.7 32 85-117 32-63 (306)
265 KOG1532 GTPase XAB1, interacts 56.5 80 0.0017 23.4 9.9 32 19-50 14-45 (366)
266 KOG0781 Signal recognition par 56.1 82 0.0018 25.2 7.0 88 27-128 442-538 (587)
267 PRK10279 hypothetical protein; 54.6 20 0.00043 26.4 3.5 34 84-118 21-54 (300)
268 PF10142 PhoPQ_related: PhoPQ- 54.6 62 0.0013 24.7 6.1 50 86-136 158-210 (367)
269 COG1752 RssA Predicted esteras 54.3 20 0.00043 26.3 3.5 31 86-117 29-59 (306)
270 cd07212 Pat_PNPLA9 Patatin-lik 54.2 26 0.00056 25.9 4.1 18 100-117 35-52 (312)
271 COG1506 DAP2 Dipeptidyl aminop 54.0 80 0.0017 25.8 7.1 46 21-68 549-595 (620)
272 cd07210 Pat_hypo_W_succinogene 53.8 27 0.00058 24.4 3.9 32 86-118 18-49 (221)
273 cd07227 Pat_Fungal_NTE1 Fungal 51.6 25 0.00054 25.4 3.6 33 84-117 26-58 (269)
274 cd07224 Pat_like Patatin-like 50.9 32 0.0007 24.1 4.0 34 84-118 15-50 (233)
275 COG3340 PepE Peptidase E [Amin 49.9 67 0.0015 22.6 5.2 38 23-62 32-70 (224)
276 PRK05282 (alpha)-aspartyl dipe 49.8 91 0.002 22.1 6.9 40 22-63 30-70 (233)
277 cd07228 Pat_NTE_like_bacteria 47.5 43 0.00093 22.2 4.1 34 84-118 16-49 (175)
278 PRK04148 hypothetical protein; 47.5 53 0.0011 21.1 4.2 36 82-117 3-38 (134)
279 cd07218 Pat_iPLA2 Calcium-inde 46.5 45 0.00098 23.7 4.2 35 84-118 16-51 (245)
280 PF14253 AbiH: Bacteriophage a 46.3 14 0.00031 26.2 1.7 15 95-109 233-247 (270)
281 cd07208 Pat_hypo_Ecoli_yjju_li 45.8 43 0.00093 23.9 4.1 33 85-118 15-48 (266)
282 COG5023 Tubulin [Cytoskeleton] 45.2 53 0.0011 25.2 4.4 52 77-128 110-169 (443)
283 cd07205 Pat_PNPLA6_PNPLA7_NTE1 45.0 49 0.0011 21.8 4.0 33 84-117 16-48 (175)
284 PF09419 PGP_phosphatase: Mito 44.9 71 0.0015 21.4 4.7 51 53-108 39-89 (168)
285 TIGR03707 PPK2_P_aer polyphosp 44.6 47 0.001 23.5 4.0 40 21-63 28-68 (230)
286 cd07209 Pat_hypo_Ecoli_Z1214_l 44.5 38 0.00083 23.4 3.6 34 85-119 15-48 (215)
287 TIGR03709 PPK2_rel_1 polyphosp 44.4 49 0.0011 24.0 4.1 40 21-63 53-93 (264)
288 PRK10468 hydrogenase 2 small s 44.2 1.4E+02 0.0031 22.9 6.6 17 21-37 46-62 (371)
289 cd01714 ETF_beta The electron 44.0 52 0.0011 22.6 4.1 38 80-118 93-134 (202)
290 cd07230 Pat_TGL4-5_like Triacy 42.4 26 0.00056 27.2 2.6 36 84-120 89-124 (421)
291 COG0529 CysC Adenylylsulfate k 41.7 1.1E+02 0.0025 21.0 9.3 40 21-62 20-59 (197)
292 cd00382 beta_CA Carbonic anhyd 40.5 59 0.0013 20.2 3.6 30 82-111 44-73 (119)
293 PF11713 Peptidase_C80: Peptid 40.5 14 0.0003 24.4 0.8 31 79-109 78-116 (157)
294 TIGR02816 pfaB_fam PfaB family 40.0 44 0.00096 26.9 3.6 26 92-117 260-285 (538)
295 COG0218 Predicted GTPase [Gene 38.9 1.1E+02 0.0024 21.2 5.0 41 57-102 72-113 (200)
296 cd00286 Tubulin_FtsZ Tubulin/F 38.7 1.6E+02 0.0035 21.8 6.5 30 79-108 71-100 (328)
297 cd07232 Pat_PLPL Patain-like p 38.3 31 0.00067 26.6 2.5 36 84-120 83-118 (407)
298 COG0541 Ffh Signal recognition 38.3 2E+02 0.0043 22.7 10.3 106 21-128 97-247 (451)
299 cd00883 beta_CA_cladeA Carboni 36.6 68 0.0015 21.7 3.7 33 83-115 67-99 (182)
300 cd02188 gamma_tubulin Gamma-tu 35.7 2.1E+02 0.0046 22.3 6.9 33 78-110 111-143 (431)
301 cd07229 Pat_TGL3_like Triacylg 35.5 43 0.00094 25.8 2.8 35 84-119 99-133 (391)
302 PF10686 DUF2493: Protein of u 35.3 42 0.00091 18.9 2.2 11 23-33 31-41 (71)
303 PF15566 Imm18: Immunity prote 34.8 75 0.0016 16.8 2.9 29 81-109 5-33 (52)
304 COG4021 Uncharacterized conser 34.1 1.7E+02 0.0036 20.7 6.5 62 44-105 11-75 (249)
305 COG2830 Uncharacterized protei 33.9 22 0.00047 23.9 0.9 77 22-129 10-87 (214)
306 COG1448 TyrB Aspartate/tyrosin 33.6 2.3E+02 0.0049 22.0 7.0 88 22-128 170-261 (396)
307 PF01734 Patatin: Patatin-like 33.4 45 0.00097 21.6 2.5 21 97-117 27-47 (204)
308 PLN03006 carbonate dehydratase 33.2 76 0.0017 23.5 3.7 33 83-115 158-190 (301)
309 smart00864 Tubulin Tubulin/Fts 33.1 1.2E+02 0.0026 20.5 4.5 32 76-110 65-96 (192)
310 PF08433 KTI12: Chromatin asso 32.9 1.6E+02 0.0035 21.3 5.3 36 25-62 2-37 (270)
311 cd03379 beta_CA_cladeD Carboni 32.7 78 0.0017 20.4 3.4 29 82-110 41-69 (142)
312 cd02202 FtsZ_type2 FtsZ is a G 32.5 1.3E+02 0.0028 22.7 4.9 37 74-110 73-111 (349)
313 cd03028 GRX_PICOT_like Glutare 32.3 1.1E+02 0.0023 17.8 9.4 80 21-117 6-85 (90)
314 COG4667 Predicted esterase of 32.1 49 0.0011 24.1 2.5 38 84-121 27-64 (292)
315 cd02189 delta_tubulin The tubu 31.9 1.8E+02 0.0039 22.8 5.8 34 77-110 106-139 (446)
316 cd07221 Pat_PNPLA3 Patatin-lik 31.8 98 0.0021 22.1 4.0 35 84-118 16-53 (252)
317 KOG1752 Glutaredoxin and relat 31.7 1.3E+02 0.0027 18.4 8.4 81 21-120 12-92 (104)
318 PRK13938 phosphoheptose isomer 31.4 1.7E+02 0.0037 20.1 5.0 24 95-118 44-67 (196)
319 cd00884 beta_CA_cladeB Carboni 31.4 93 0.002 21.2 3.7 33 83-115 73-105 (190)
320 cd07206 Pat_TGL3-4-5_SDP1 Tria 31.4 62 0.0014 23.9 3.0 33 84-117 85-117 (298)
321 cd05312 NAD_bind_1_malic_enz N 31.4 1.6E+02 0.0036 21.5 5.1 57 56-117 61-126 (279)
322 cd07222 Pat_PNPLA4 Patatin-lik 30.6 91 0.002 22.1 3.7 33 84-116 15-50 (246)
323 COG3007 Uncharacterized paraqu 30.4 2.3E+02 0.005 21.3 5.6 40 80-119 21-64 (398)
324 KOG0693 Myo-inositol-1-phospha 30.2 2.6E+02 0.0055 21.6 5.9 59 44-102 167-228 (512)
325 TIGR00365 monothiol glutaredox 30.1 1.2E+02 0.0027 17.9 8.7 82 21-119 10-91 (97)
326 cd07211 Pat_PNPLA8 Patatin-lik 29.9 45 0.00098 24.4 2.2 17 100-116 44-60 (308)
327 KOG3086 Predicted dioxygenase 29.8 1.9E+02 0.0041 21.0 5.0 54 81-134 20-81 (296)
328 COG1751 Uncharacterized conser 29.8 1.7E+02 0.0038 19.5 5.6 43 82-126 14-56 (186)
329 cd01819 Patatin_and_cPLA2 Pata 29.7 85 0.0018 20.4 3.2 31 85-115 15-46 (155)
330 cd07213 Pat17_PNPLA8_PNPLA9_li 29.3 48 0.001 24.1 2.2 18 100-117 37-54 (288)
331 cd07231 Pat_SDP1-like Sugar-De 29.2 86 0.0019 23.5 3.4 33 84-117 84-116 (323)
332 PF03976 PPK2: Polyphosphate k 29.1 28 0.00061 24.5 0.9 39 22-63 29-68 (228)
333 cd07204 Pat_PNPLA_like Patatin 28.8 57 0.0012 23.1 2.4 35 84-118 15-52 (243)
334 PLN00222 tubulin gamma chain; 28.8 2.8E+02 0.006 21.9 6.3 33 78-110 113-145 (454)
335 cd07220 Pat_PNPLA2 Patatin-lik 28.7 95 0.0021 22.2 3.5 35 84-118 20-57 (249)
336 cd07217 Pat17_PNPLA8_PNPLA9_li 28.2 53 0.0012 24.7 2.3 18 100-117 44-61 (344)
337 PRK15219 carbonic anhydrase; P 27.3 1.1E+02 0.0024 21.9 3.7 33 82-114 128-160 (245)
338 PRK14194 bifunctional 5,10-met 27.0 1.1E+02 0.0024 22.7 3.6 24 94-117 157-182 (301)
339 COG0813 DeoD Purine-nucleoside 26.9 2.4E+02 0.0051 20.1 6.0 39 93-131 52-92 (236)
340 COG3675 Predicted lipase [Lipi 26.6 40 0.00086 24.9 1.3 46 86-131 163-213 (332)
341 PF04446 Thg1: tRNAHis guanyly 26.4 1.8E+02 0.004 18.7 5.0 52 52-105 18-73 (135)
342 PF00484 Pro_CA: Carbonic anhy 26.3 1.8E+02 0.004 18.6 5.2 34 81-114 39-72 (153)
343 PF03610 EIIA-man: PTS system 26.3 1.6E+02 0.0035 17.9 4.0 74 25-117 2-78 (116)
344 PRK13018 cell division protein 26.3 3.1E+02 0.0066 21.2 7.3 36 73-111 92-127 (378)
345 PRK14538 putative bifunctional 26.1 3.7E+02 0.008 23.3 6.9 52 63-116 336-393 (838)
346 PF02882 THF_DHG_CYH_C: Tetrah 25.6 1.6E+02 0.0034 19.5 3.9 38 80-117 20-59 (160)
347 PLN00416 carbonate dehydratase 25.5 1.4E+02 0.0031 21.5 3.9 34 82-115 125-158 (258)
348 cd02190 epsilon_tubulin The tu 25.4 3.1E+02 0.0068 21.0 6.8 34 77-110 79-112 (379)
349 KOG1202 Animal-type fatty acid 25.4 2.6E+02 0.0056 25.8 5.8 27 83-109 568-594 (2376)
350 PF01656 CbiA: CobQ/CobB/MinD/ 25.2 1.2E+02 0.0025 20.0 3.4 33 28-62 3-35 (195)
351 COG1073 Hydrolases of the alph 24.7 2.1E+02 0.0046 19.9 4.8 38 21-62 47-84 (299)
352 PRK00889 adenylylsulfate kinas 24.6 2E+02 0.0044 18.7 4.5 37 23-61 3-39 (175)
353 cd06059 Tubulin The tubulin su 24.6 2.3E+02 0.0049 21.6 5.1 33 78-110 70-102 (382)
354 PLN02154 carbonic anhydrase 24.6 1.5E+02 0.0032 21.9 3.9 33 83-115 152-184 (290)
355 PLN02752 [acyl-carrier protein 24.5 53 0.0012 24.5 1.7 18 99-116 126-143 (343)
356 TIGR02764 spore_ybaN_pdaB poly 24.3 1.3E+02 0.0028 20.1 3.5 17 44-60 170-187 (191)
357 cd07199 Pat17_PNPLA8_PNPLA9_li 24.2 1.2E+02 0.0026 21.4 3.5 18 100-117 37-54 (258)
358 PF01075 Glyco_transf_9: Glyco 24.1 1.7E+02 0.0038 20.2 4.2 39 21-60 103-143 (247)
359 PLN00220 tubulin beta chain; P 24.1 3.6E+02 0.0078 21.2 6.4 34 77-110 110-143 (447)
360 COG3562 KpsS Capsule polysacch 23.9 3.4E+02 0.0073 20.8 5.8 85 25-117 15-104 (403)
361 PF01583 APS_kinase: Adenylyls 23.8 2.2E+02 0.0049 18.8 8.4 37 23-61 1-37 (156)
362 PRK10437 carbonic anhydrase; P 23.5 1.7E+02 0.0036 20.6 3.9 33 83-115 77-109 (220)
363 PRK06696 uridine kinase; Valid 23.5 2.2E+02 0.0047 19.7 4.5 37 21-59 19-55 (223)
364 PTZ00387 epsilon tubulin; Prov 23.3 2.1E+02 0.0045 22.7 4.7 34 77-110 111-144 (465)
365 COG4088 Predicted nucleotide k 23.2 2.9E+02 0.0062 19.8 7.1 35 25-61 2-36 (261)
366 COG0288 CynT Carbonic anhydras 23.2 1.2E+02 0.0026 21.0 3.1 37 81-117 76-112 (207)
367 KOG4127 Renal dipeptidase [Pos 23.1 1E+02 0.0023 23.6 2.9 76 22-103 265-341 (419)
368 PLN00221 tubulin alpha chain; 22.9 3.8E+02 0.0083 21.1 6.2 33 77-109 112-144 (450)
369 cd05007 SIS_Etherase N-acetylm 22.9 2.9E+02 0.0064 19.8 5.2 36 82-117 34-70 (257)
370 PF06833 MdcE: Malonate decarb 22.9 2.9E+02 0.0063 19.7 6.1 60 53-113 64-124 (234)
371 PRK15416 lipopolysaccharide co 22.9 1.2E+02 0.0027 21.0 3.1 22 86-107 141-162 (201)
372 PLN03019 carbonic anhydrase 22.8 1.4E+02 0.0031 22.4 3.6 33 83-115 201-233 (330)
373 COG2885 OmpA Outer membrane pr 22.7 1.8E+02 0.0039 19.5 3.9 27 79-105 97-123 (190)
374 PTZ00335 tubulin alpha chain; 22.2 4E+02 0.0086 21.0 6.7 33 77-109 112-144 (448)
375 cd07216 Pat17_PNPLA8_PNPLA9_li 22.2 59 0.0013 23.8 1.6 17 100-116 45-61 (309)
376 TIGR00391 hydA hydrogenase (Ni 22.1 3.7E+02 0.0081 20.7 6.0 16 21-36 48-63 (365)
377 PRK11789 N-acetyl-anhydromuran 21.9 1.2E+02 0.0026 20.7 2.8 30 77-106 129-158 (185)
378 TIGR01068 thioredoxin thioredo 21.8 1.7E+02 0.0036 16.6 4.0 41 22-62 14-54 (101)
379 KOG3734 Predicted phosphoglyce 21.8 2.5E+02 0.0054 20.6 4.5 40 76-115 174-213 (272)
380 TIGR00246 tRNA_RlmH_YbeA rRNA 21.8 2.5E+02 0.0053 18.5 5.6 51 44-107 56-106 (153)
381 cd03146 GAT1_Peptidase_E Type 21.8 2.8E+02 0.006 19.1 6.3 91 21-113 29-129 (212)
382 PLN03014 carbonic anhydrase 21.7 1.5E+02 0.0032 22.5 3.5 32 83-114 206-237 (347)
383 cd03129 GAT1_Peptidase_E_like 21.7 1.3E+02 0.0028 20.6 3.1 88 22-114 28-130 (210)
384 KOG0673 Thymidylate synthase [ 21.6 96 0.0021 22.1 2.4 49 55-103 112-161 (293)
385 PF02353 CMAS: Mycolic acid cy 21.6 2.9E+02 0.0064 20.0 5.0 45 81-126 45-92 (273)
386 PRK06731 flhF flagellar biosyn 21.6 3.3E+02 0.0071 19.8 8.3 65 53-128 153-219 (270)
387 cd01983 Fer4_NifH The Fer4_Nif 21.5 1.6E+02 0.0035 16.3 3.6 32 28-61 3-34 (99)
388 COG4850 Uncharacterized conser 21.4 3.1E+02 0.0067 20.9 5.0 41 86-126 267-309 (373)
389 TIGR02884 spore_pdaA delta-lac 21.2 1.5E+02 0.0033 20.6 3.4 34 24-61 187-221 (224)
390 cd03378 beta_CA_cladeC Carboni 21.1 2E+02 0.0044 18.9 3.8 30 83-112 78-107 (154)
391 PF10561 UPF0565: Uncharacteri 20.7 1.1E+02 0.0023 22.8 2.6 21 97-117 193-213 (303)
392 PF01118 Semialdhyde_dh: Semia 20.6 1.8E+02 0.0038 17.8 3.3 23 98-120 1-24 (121)
393 cd02186 alpha_tubulin The tubu 20.6 3.5E+02 0.0076 21.2 5.5 34 77-110 111-144 (434)
394 COG0859 RfaF ADP-heptose:LPS h 20.6 2.2E+02 0.0047 21.2 4.3 38 23-60 175-214 (334)
395 PF00691 OmpA: OmpA family; I 20.5 1.7E+02 0.0037 16.8 3.2 10 98-107 32-41 (97)
396 PF05139 Erythro_esteras: Eryt 20.5 1.3E+02 0.0027 22.4 3.1 24 81-104 187-211 (346)
397 cd07214 Pat17_isozyme_like Pat 20.5 71 0.0015 24.0 1.7 18 100-117 46-63 (349)
398 COG4820 EutJ Ethanolamine util 20.1 2.3E+02 0.005 20.0 3.9 29 76-104 207-235 (277)
399 COG3621 Patatin [General funct 20.0 3.8E+02 0.0083 20.5 5.2 17 101-117 46-62 (394)
No 1
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.83 E-value=5.2e-20 Score=132.50 Aligned_cols=106 Identities=18% Similarity=0.261 Sum_probs=87.4
Q ss_pred CCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCc----hHHHHHHHHHHHHHHHHHhCCCC
Q 031716 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPP----KAEKLVEFHTDVVKGAVAKFPGH 97 (154)
Q Consensus 22 ~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~----~~~~~~~~~~~~i~~~~~~~~~~ 97 (154)
+.++||++||++++.. .|..++..+...++|+++|+||+|.+...... ......+++++++..+++++..+
T Consensus 28 ~~~~vlllHG~~~~~~-----~w~~~~~~L~~~~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l~~~ 102 (294)
T PLN02824 28 SGPALVLVHGFGGNAD-----HWRKNTPVLAKSHRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDVVGD 102 (294)
T ss_pred CCCeEEEECCCCCChh-----HHHHHHHHHHhCCeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHHhcCC
Confidence 3478999999999874 47777777777899999999999754432111 12456789999999999888889
Q ss_pred eEEEEEeCcchHHHHHHHhhcCccccEEEEeccCc
Q 031716 98 PLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPL 132 (154)
Q Consensus 98 ~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~ 132 (154)
+++|+||||||++++.++.++|++++++|+++++.
T Consensus 103 ~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~ 137 (294)
T PLN02824 103 PAFVICNSVGGVVGLQAAVDAPELVRGVMLINISL 137 (294)
T ss_pred CeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCc
Confidence 99999999999999999999999999999998654
No 2
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.82 E-value=5.9e-20 Score=131.19 Aligned_cols=108 Identities=15% Similarity=0.104 Sum_probs=90.5
Q ss_pred CCCCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCc-hHHHHHHHHHHHHHHHHHhCCCCe
Q 031716 20 TSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPP-KAEKLVEFHTDVVKGAVAKFPGHP 98 (154)
Q Consensus 20 ~~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~ 98 (154)
..++.++|++||+|++.+ .|.+.+..|.....|+++|++|+|.++.+..+ +......++.+.++++....+..+
T Consensus 87 ~~~~~plVliHGyGAg~g-----~f~~Nf~~La~~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~~L~K 161 (365)
T KOG4409|consen 87 SANKTPLVLIHGYGAGLG-----LFFRNFDDLAKIRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKMGLEK 161 (365)
T ss_pred ccCCCcEEEEeccchhHH-----HHHHhhhhhhhcCceEEecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHcCCcc
Confidence 366788999999998875 58888888888999999999999755543322 233345588889999999999999
Q ss_pred EEEEEeCcchHHHHHHHhhcCccccEEEEeccCc
Q 031716 99 LILAGKSMGSRVSCMVACKEDIAASAVLCLGYPL 132 (154)
Q Consensus 99 i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~ 132 (154)
.+|+|||+||++|..+|.+||++|+.+|+++|.-
T Consensus 162 milvGHSfGGYLaa~YAlKyPerV~kLiLvsP~G 195 (365)
T KOG4409|consen 162 MILVGHSFGGYLAAKYALKYPERVEKLILVSPWG 195 (365)
T ss_pred eeEeeccchHHHHHHHHHhChHhhceEEEecccc
Confidence 9999999999999999999999999999998644
No 3
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.82 E-value=1.2e-19 Score=129.61 Aligned_cols=103 Identities=14% Similarity=0.103 Sum_probs=86.1
Q ss_pred CCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeEEE
Q 031716 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLIL 101 (154)
Q Consensus 22 ~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l 101 (154)
..++|||+||++++.. .|..+++.+.++|+|+++|+||||.+.. +. .....+++++.+..+++.++.++++|
T Consensus 24 ~~~plvllHG~~~~~~-----~w~~~~~~L~~~~~vi~~Dl~G~G~S~~--~~-~~~~~~~~~~~~~~~i~~l~~~~~~L 95 (276)
T TIGR02240 24 GLTPLLIFNGIGANLE-----LVFPFIEALDPDLEVIAFDVPGVGGSST--PR-HPYRFPGLAKLAARMLDYLDYGQVNA 95 (276)
T ss_pred CCCcEEEEeCCCcchH-----HHHHHHHHhccCceEEEECCCCCCCCCC--CC-CcCcHHHHHHHHHHHHHHhCcCceEE
Confidence 4578999999998874 4777788887889999999999875432 22 23457788888888898888889999
Q ss_pred EEeCcchHHHHHHHhhcCccccEEEEeccCc
Q 031716 102 AGKSMGSRVSCMVACKEDIAASAVLCLGYPL 132 (154)
Q Consensus 102 ~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~ 132 (154)
+||||||.+++.++.++|++++++|+++++.
T Consensus 96 vG~S~GG~va~~~a~~~p~~v~~lvl~~~~~ 126 (276)
T TIGR02240 96 IGVSWGGALAQQFAHDYPERCKKLILAATAA 126 (276)
T ss_pred EEECHHHHHHHHHHHHCHHHhhheEEeccCC
Confidence 9999999999999999999999999998764
No 4
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.81 E-value=3.7e-19 Score=128.59 Aligned_cols=105 Identities=12% Similarity=0.140 Sum_probs=85.0
Q ss_pred CCcEEEEecCCCCCCCchHHHHHHHHHHhhc-CCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeEE
Q 031716 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKAL-DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLI 100 (154)
Q Consensus 22 ~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~-~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~ 100 (154)
..|+|||+||++++.. .|..+++.|. .+|+|+++|+||||.+... ........+++++++..++++++.++++
T Consensus 45 ~~~~lvliHG~~~~~~-----~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~-~~~~~~~~~~~a~~l~~~l~~l~~~~v~ 118 (302)
T PRK00870 45 DGPPVLLLHGEPSWSY-----LYRKMIPILAAAGHRVIAPDLIGFGRSDKP-TRREDYTYARHVEWMRSWFEQLDLTDVT 118 (302)
T ss_pred CCCEEEEECCCCCchh-----hHHHHHHHHHhCCCEEEEECCCCCCCCCCC-CCcccCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4578999999987763 4667777775 5899999999999754332 1112345678888899999888888999
Q ss_pred EEEeCcchHHHHHHHhhcCccccEEEEeccCc
Q 031716 101 LAGKSMGSRVSCMVACKEDIAASAVLCLGYPL 132 (154)
Q Consensus 101 l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~ 132 (154)
|+||||||.++..++.++|+++.+++++++..
T Consensus 119 lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 150 (302)
T PRK00870 119 LVCQDWGGLIGLRLAAEHPDRFARLVVANTGL 150 (302)
T ss_pred EEEEChHHHHHHHHHHhChhheeEEEEeCCCC
Confidence 99999999999999999999999999998643
No 5
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.79 E-value=1.8e-18 Score=120.97 Aligned_cols=100 Identities=18% Similarity=0.254 Sum_probs=81.5
Q ss_pred CcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeEEEE
Q 031716 23 SPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILA 102 (154)
Q Consensus 23 ~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~ 102 (154)
.|+|||+||++++.. .|..+...+ .+|+|+++|+||+|.+... . ....+++++++..++++.+.++++++
T Consensus 2 ~p~vvllHG~~~~~~-----~w~~~~~~l-~~~~vi~~D~~G~G~S~~~--~--~~~~~~~~~~l~~~l~~~~~~~~~lv 71 (242)
T PRK11126 2 LPWLVFLHGLLGSGQ-----DWQPVGEAL-PDYPRLYIDLPGHGGSAAI--S--VDGFADVSRLLSQTLQSYNILPYWLV 71 (242)
T ss_pred CCEEEEECCCCCChH-----HHHHHHHHc-CCCCEEEecCCCCCCCCCc--c--ccCHHHHHHHHHHHHHHcCCCCeEEE
Confidence 468999999998774 477777777 5799999999998654332 2 12567888888888988888899999
Q ss_pred EeCcchHHHHHHHhhcCc-cccEEEEeccCc
Q 031716 103 GKSMGSRVSCMVACKEDI-AASAVLCLGYPL 132 (154)
Q Consensus 103 G~S~Gg~~a~~~a~~~~~-~i~~~v~~~~p~ 132 (154)
||||||.+++.++.++++ +++++++++++.
T Consensus 72 G~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~ 102 (242)
T PRK11126 72 GYSLGGRIAMYYACQGLAGGLCGLIVEGGNP 102 (242)
T ss_pred EECHHHHHHHHHHHhCCcccccEEEEeCCCC
Confidence 999999999999999865 499999887553
No 6
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.79 E-value=1.6e-18 Score=122.02 Aligned_cols=104 Identities=10% Similarity=0.127 Sum_probs=84.6
Q ss_pred CCCCCCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCC
Q 031716 18 DDTSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGH 97 (154)
Q Consensus 18 ~~~~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 97 (154)
..+.++|+||++||++++.. .|..+...+.++|+|+.+|+||+|.+.. .. ....+++++++..+++.++.+
T Consensus 11 ~~~~~~~~iv~lhG~~~~~~-----~~~~~~~~l~~~~~vi~~D~~G~G~s~~--~~--~~~~~~~~~d~~~~l~~l~~~ 81 (255)
T PRK10673 11 QNPHNNSPIVLVHGLFGSLD-----NLGVLARDLVNDHDIIQVDMRNHGLSPR--DP--VMNYPAMAQDLLDTLDALQIE 81 (255)
T ss_pred CCCCCCCCEEEECCCCCchh-----HHHHHHHHHhhCCeEEEECCCCCCCCCC--CC--CCCHHHHHHHHHHHHHHcCCC
Confidence 33456789999999988763 4677777777889999999999874433 22 235677888888888888878
Q ss_pred eEEEEEeCcchHHHHHHHhhcCccccEEEEecc
Q 031716 98 PLILAGKSMGSRVSCMVACKEDIAASAVLCLGY 130 (154)
Q Consensus 98 ~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~ 130 (154)
+++|+||||||.+++.++.++|++++++|++++
T Consensus 82 ~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~ 114 (255)
T PRK10673 82 KATFIGHSMGGKAVMALTALAPDRIDKLVAIDI 114 (255)
T ss_pred ceEEEEECHHHHHHHHHHHhCHhhcceEEEEec
Confidence 999999999999999999999999999999864
No 7
>PLN02965 Probable pheophorbidase
Probab=99.79 E-value=1.5e-18 Score=122.70 Aligned_cols=101 Identities=17% Similarity=0.191 Sum_probs=81.6
Q ss_pred cEEEEecCCCCCCCchHHHHHHHHHHhh-cCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCC-CeEEE
Q 031716 24 PVVVFAHGAGAPSSSDWMIKWKDMLGKA-LDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPG-HPLIL 101 (154)
Q Consensus 24 ~~il~lHG~~~~~~~~~~~~~~~~~~~l-~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~i~l 101 (154)
..|||+||++.+.. .|..++..| ..+|+|+++|+||||.+... .......+++++++..+++.++. ++++|
T Consensus 4 ~~vvllHG~~~~~~-----~w~~~~~~L~~~~~~via~Dl~G~G~S~~~--~~~~~~~~~~a~dl~~~l~~l~~~~~~~l 76 (255)
T PLN02965 4 IHFVFVHGASHGAW-----CWYKLATLLDAAGFKSTCVDLTGAGISLTD--SNTVSSSDQYNRPLFALLSDLPPDHKVIL 76 (255)
T ss_pred eEEEEECCCCCCcC-----cHHHHHHHHhhCCceEEEecCCcCCCCCCC--ccccCCHHHHHHHHHHHHHhcCCCCCEEE
Confidence 35999999998764 477777777 47899999999999744322 11233467888888888888776 49999
Q ss_pred EEeCcchHHHHHHHhhcCccccEEEEeccC
Q 031716 102 AGKSMGSRVSCMVACKEDIAASAVLCLGYP 131 (154)
Q Consensus 102 ~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p 131 (154)
+||||||.++..++.++|++++++|++++.
T Consensus 77 vGhSmGG~ia~~~a~~~p~~v~~lvl~~~~ 106 (255)
T PLN02965 77 VGHSIGGGSVTEALCKFTDKISMAIYVAAA 106 (255)
T ss_pred EecCcchHHHHHHHHhCchheeEEEEEccc
Confidence 999999999999999999999999998764
No 8
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.79 E-value=1.8e-18 Score=124.59 Aligned_cols=102 Identities=14% Similarity=0.197 Sum_probs=84.4
Q ss_pred CCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeEEE
Q 031716 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLIL 101 (154)
Q Consensus 22 ~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l 101 (154)
+.++||++||++++.. .|..+...|...++|+++|+||+|.+.. +.. ....+++++++..++++++.+++++
T Consensus 26 ~g~~vvllHG~~~~~~-----~w~~~~~~L~~~~~via~D~~G~G~S~~--~~~-~~~~~~~a~dl~~ll~~l~~~~~~l 97 (295)
T PRK03592 26 EGDPIVFLHGNPTSSY-----LWRNIIPHLAGLGRCLAPDLIGMGASDK--PDI-DYTFADHARYLDAWFDALGLDDVVL 97 (295)
T ss_pred CCCEEEEECCCCCCHH-----HHHHHHHHHhhCCEEEEEcCCCCCCCCC--CCC-CCCHHHHHHHHHHHHHHhCCCCeEE
Confidence 4578999999998763 4666777776677999999999865433 221 2457888888999999888889999
Q ss_pred EEeCcchHHHHHHHhhcCccccEEEEeccC
Q 031716 102 AGKSMGSRVSCMVACKEDIAASAVLCLGYP 131 (154)
Q Consensus 102 ~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p 131 (154)
+|||+||.+++.++.++|++++++|+++++
T Consensus 98 vGhS~Gg~ia~~~a~~~p~~v~~lil~~~~ 127 (295)
T PRK03592 98 VGHDWGSALGFDWAARHPDRVRGIAFMEAI 127 (295)
T ss_pred EEECHHHHHHHHHHHhChhheeEEEEECCC
Confidence 999999999999999999999999999864
No 9
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.79 E-value=1.1e-18 Score=129.64 Aligned_cols=108 Identities=13% Similarity=0.168 Sum_probs=89.4
Q ss_pred CCCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCc-hHHHHHHHHHHHHHHHHHhCCCCeE
Q 031716 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPP-KAEKLVEFHTDVVKGAVAKFPGHPL 99 (154)
Q Consensus 21 ~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~i 99 (154)
.+.++||++||++++.. .|..++..+.++|+|+++|+||||.+...... ......+++++.+..++++++.+++
T Consensus 125 ~~~~~ivllHG~~~~~~-----~w~~~~~~L~~~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l~~~~~ 199 (383)
T PLN03084 125 NNNPPVLLIHGFPSQAY-----SYRKVLPVLSKNYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDELKSDKV 199 (383)
T ss_pred CCCCeEEEECCCCCCHH-----HHHHHHHHHhcCCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHHhCCCCc
Confidence 34689999999998764 47777777778899999999999754432211 1245678899999999999888899
Q ss_pred EEEEeCcchHHHHHHHhhcCccccEEEEeccCcc
Q 031716 100 ILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLK 133 (154)
Q Consensus 100 ~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~~ 133 (154)
.|+|||+||.+++.++.++|++++++|+++++..
T Consensus 200 ~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~ 233 (383)
T PLN03084 200 SLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLT 233 (383)
T ss_pred eEEEECHHHHHHHHHHHhChHhhcEEEEECCCCc
Confidence 9999999999999999999999999999998754
No 10
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.79 E-value=9e-19 Score=119.86 Aligned_cols=103 Identities=21% Similarity=0.307 Sum_probs=82.6
Q ss_pred EEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeEEEEEeC
Q 031716 26 VVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKS 105 (154)
Q Consensus 26 il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~G~S 105 (154)
||++||++++.. .|..+++.+.++|+|+++|+||+|.+.... .......+++++++..++++...++++++|||
T Consensus 1 vv~~hG~~~~~~-----~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S 74 (228)
T PF12697_consen 1 VVFLHGFGGSSE-----SWDPLAEALARGYRVIAFDLPGHGRSDPPP-DYSPYSIEDYAEDLAELLDALGIKKVILVGHS 74 (228)
T ss_dssp EEEE-STTTTGG-----GGHHHHHHHHTTSEEEEEECTTSTTSSSHS-SGSGGSHHHHHHHHHHHHHHTTTSSEEEEEET
T ss_pred eEEECCCCCCHH-----HHHHHHHHHhCCCEEEEEecCCcccccccc-ccCCcchhhhhhhhhhcccccccccccccccc
Confidence 799999999873 355566666579999999999986433321 11234568888888899998888899999999
Q ss_pred cchHHHHHHHhhcCccccEEEEeccCccc
Q 031716 106 MGSRVSCMVACKEDIAASAVLCLGYPLKV 134 (154)
Q Consensus 106 ~Gg~~a~~~a~~~~~~i~~~v~~~~p~~~ 134 (154)
+||.+++.++.++|++++++|+++++...
T Consensus 75 ~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 103 (228)
T PF12697_consen 75 MGGMIALRLAARYPDRVKGLVLLSPPPPL 103 (228)
T ss_dssp HHHHHHHHHHHHSGGGEEEEEEESESSSH
T ss_pred cccccccccccccccccccceeecccccc
Confidence 99999999999999999999999987753
No 11
>PHA02857 monoglyceride lipase; Provisional
Probab=99.77 E-value=8.7e-18 Score=119.85 Aligned_cols=109 Identities=21% Similarity=0.277 Sum_probs=80.6
Q ss_pred CCCCcEEEEecCCCCCCCchHHHHHHHHHHhhc-CCeEEEEEcCCCCCCCCCCC--CchHHHHHHHHHHHHHHHHHhCCC
Q 031716 20 TSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKAL-DAVEVVTFDYPYIAGGKRKA--PPKAEKLVEFHTDVVKGAVAKFPG 96 (154)
Q Consensus 20 ~~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~-~~~~v~~~d~~g~g~~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~ 96 (154)
...+++|+++||++++.. .|..+.+.+. .||+|+++|+||||.+.... .......++|+.+.+..+.+..+.
T Consensus 22 ~~~~~~v~llHG~~~~~~-----~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~ 96 (276)
T PHA02857 22 TYPKALVFISHGAGEHSG-----RYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYVRDVVQHVVTIKSTYPG 96 (276)
T ss_pred CCCCEEEEEeCCCccccc-----hHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHHHHHHHHHHHHHhhCCC
Confidence 355678888899988764 3555555554 68999999999997543211 123334456666666665555566
Q ss_pred CeEEEEEeCcchHHHHHHHhhcCccccEEEEeccCcc
Q 031716 97 HPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLK 133 (154)
Q Consensus 97 ~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~~ 133 (154)
.+++|+||||||.+++.++.++|+.++++|++++...
T Consensus 97 ~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~ 133 (276)
T PHA02857 97 VPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVN 133 (276)
T ss_pred CCEEEEEcCchHHHHHHHHHhCccccceEEEeccccc
Confidence 7899999999999999999999999999999987543
No 12
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.77 E-value=7.8e-18 Score=120.20 Aligned_cols=106 Identities=18% Similarity=0.232 Sum_probs=77.1
Q ss_pred CCcEEEEecCCCCCCCchHHHHHHHHHHhh-cCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeEE
Q 031716 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKA-LDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLI 100 (154)
Q Consensus 22 ~~~~il~lHG~~~~~~~~~~~~~~~~~~~l-~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~ 100 (154)
+.|+||++||++++. ..|.. +.+.+..+ ..+|+|+++|+||+|.+.....+. .. ....++++..+++.++.++++
T Consensus 29 ~~~~ivllHG~~~~~-~~~~~-~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~-~~-~~~~~~~l~~~l~~l~~~~~~ 104 (282)
T TIGR03343 29 NGEAVIMLHGGGPGA-GGWSN-YYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDE-QR-GLVNARAVKGLMDALDIEKAH 104 (282)
T ss_pred CCCeEEEECCCCCch-hhHHH-HHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcc-cc-cchhHHHHHHHHHHcCCCCee
Confidence 457899999998765 33322 22223333 368999999999987543321111 11 113466677788888888999
Q ss_pred EEEeCcchHHHHHHHhhcCccccEEEEeccC
Q 031716 101 LAGKSMGSRVSCMVACKEDIAASAVLCLGYP 131 (154)
Q Consensus 101 l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p 131 (154)
++||||||++++.++.++|++++++|+++++
T Consensus 105 lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 135 (282)
T TIGR03343 105 LVGNSMGGATALNFALEYPDRIGKLILMGPG 135 (282)
T ss_pred EEEECchHHHHHHHHHhChHhhceEEEECCC
Confidence 9999999999999999999999999999864
No 13
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.77 E-value=1.6e-17 Score=122.41 Aligned_cols=108 Identities=23% Similarity=0.305 Sum_probs=74.5
Q ss_pred CCCcEEEEecCCCCCCCchHHHHHHHHHHhhc-CCeEEEEEcCCCCCCCCCCC--CchHHHHHHHHHHHHHHHHHh--CC
Q 031716 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKAL-DAVEVVTFDYPYIAGGKRKA--PPKAEKLVEFHTDVVKGAVAK--FP 95 (154)
Q Consensus 21 ~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~-~~~~v~~~d~~g~g~~~~~~--~~~~~~~~~~~~~~i~~~~~~--~~ 95 (154)
..+++||++||++++.. .+ |..+...+. .||+|+++|+||||.+.... .......++++.+.++.+... ..
T Consensus 85 ~~~~~iv~lHG~~~~~~-~~---~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~dv~~~l~~l~~~~~~~ 160 (349)
T PLN02385 85 RPKAAVCFCHGYGDTCT-FF---FEGIARKIASSGYGVFAMDYPGFGLSEGLHGYIPSFDDLVDDVIEHYSKIKGNPEFR 160 (349)
T ss_pred CCCeEEEEECCCCCccc-hH---HHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHhccccC
Confidence 45689999999988753 22 334444443 69999999999997443211 112333344444444443322 23
Q ss_pred CCeEEEEEeCcchHHHHHHHhhcCccccEEEEeccCc
Q 031716 96 GHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPL 132 (154)
Q Consensus 96 ~~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~ 132 (154)
..+++|+||||||++++.++.++|++++++|++++..
T Consensus 161 ~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~ 197 (349)
T PLN02385 161 GLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMC 197 (349)
T ss_pred CCCEEEEEeccchHHHHHHHHhCcchhhheeEecccc
Confidence 3479999999999999999999999999999998754
No 14
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.77 E-value=5.5e-18 Score=125.38 Aligned_cols=102 Identities=21% Similarity=0.366 Sum_probs=83.3
Q ss_pred CcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeEEEE
Q 031716 23 SPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILA 102 (154)
Q Consensus 23 ~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~ 102 (154)
.|+|||+||++++.. .|..++..+.++|+|+++|+||||.+.. +.......+++++.+..+++++..++++|+
T Consensus 88 gp~lvllHG~~~~~~-----~w~~~~~~L~~~~~via~Dl~G~G~S~~--~~~~~~~~~~~a~~l~~~l~~l~~~~~~lv 160 (360)
T PLN02679 88 GPPVLLVHGFGASIP-----HWRRNIGVLAKNYTVYAIDLLGFGASDK--PPGFSYTMETWAELILDFLEEVVQKPTVLI 160 (360)
T ss_pred CCeEEEECCCCCCHH-----HHHHHHHHHhcCCEEEEECCCCCCCCCC--CCCccccHHHHHHHHHHHHHHhcCCCeEEE
Confidence 478999999998763 4777777777789999999999975433 222234567888888888888888899999
Q ss_pred EeCcchHHHHHHHh-hcCccccEEEEeccC
Q 031716 103 GKSMGSRVSCMVAC-KEDIAASAVLCLGYP 131 (154)
Q Consensus 103 G~S~Gg~~a~~~a~-~~~~~i~~~v~~~~p 131 (154)
||||||.+++.++. .+|++++++|+++++
T Consensus 161 GhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~ 190 (360)
T PLN02679 161 GNSVGSLACVIAASESTRDLVRGLVLLNCA 190 (360)
T ss_pred EECHHHHHHHHHHHhcChhhcCEEEEECCc
Confidence 99999999998887 479999999999865
No 15
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.76 E-value=3.9e-18 Score=119.36 Aligned_cols=104 Identities=17% Similarity=0.216 Sum_probs=83.7
Q ss_pred CCCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeEE
Q 031716 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLI 100 (154)
Q Consensus 21 ~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~ 100 (154)
.+.|+||++||++++.. .|...+..+.++|+|+++|+||+|.+... .......+++++.+..++++.+.++++
T Consensus 11 ~~~~~iv~lhG~~~~~~-----~~~~~~~~l~~~~~vi~~D~~G~G~S~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~ 83 (257)
T TIGR03611 11 ADAPVVVLSSGLGGSGS-----YWAPQLDVLTQRFHVVTYDHRGTGRSPGE--LPPGYSIAHMADDVLQLLDALNIERFH 83 (257)
T ss_pred CCCCEEEEEcCCCcchh-----HHHHHHHHHHhccEEEEEcCCCCCCCCCC--CcccCCHHHHHHHHHHHHHHhCCCcEE
Confidence 45788999999998763 35556666667899999999998754332 222345688888888888888888999
Q ss_pred EEEeCcchHHHHHHHhhcCccccEEEEeccC
Q 031716 101 LAGKSMGSRVSCMVACKEDIAASAVLCLGYP 131 (154)
Q Consensus 101 l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p 131 (154)
++||||||++++.++.++|+.++++|++++.
T Consensus 84 l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~ 114 (257)
T TIGR03611 84 FVGHALGGLIGLQLALRYPERLLSLVLINAW 114 (257)
T ss_pred EEEechhHHHHHHHHHHChHHhHHheeecCC
Confidence 9999999999999999999999999988753
No 16
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.76 E-value=1.2e-17 Score=119.22 Aligned_cols=109 Identities=13% Similarity=0.119 Sum_probs=82.7
Q ss_pred cCCCCCCCcEEEEecCCCCCCCchHHHHHHHHHHhhc-CCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhC
Q 031716 16 CGDDTSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKAL-DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKF 94 (154)
Q Consensus 16 ~~~~~~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~-~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 94 (154)
++.+.+++|+|||+||++.+.. .|..+...|. .+|+|+++|+||+|.... ........+++++.+..+++++
T Consensus 11 ~~~~~~~~p~vvliHG~~~~~~-----~w~~~~~~L~~~g~~vi~~dl~g~G~s~~--~~~~~~~~~~~~~~l~~~i~~l 83 (273)
T PLN02211 11 DMKPNRQPPHFVLIHGISGGSW-----CWYKIRCLMENSGYKVTCIDLKSAGIDQS--DADSVTTFDEYNKPLIDFLSSL 83 (273)
T ss_pred cccccCCCCeEEEECCCCCCcC-----cHHHHHHHHHhCCCEEEEecccCCCCCCC--CcccCCCHHHHHHHHHHHHHhc
Confidence 3445566789999999998774 3556555554 689999999999864322 1111234567777777777776
Q ss_pred C-CCeEEEEEeCcchHHHHHHHhhcCccccEEEEeccC
Q 031716 95 P-GHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYP 131 (154)
Q Consensus 95 ~-~~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p 131 (154)
. .++++|+||||||.++..++.++|++++++|++++.
T Consensus 84 ~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~ 121 (273)
T PLN02211 84 PENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAAT 121 (273)
T ss_pred CCCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccc
Confidence 4 479999999999999999999999999999999664
No 17
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.76 E-value=8.6e-18 Score=120.75 Aligned_cols=104 Identities=19% Similarity=0.219 Sum_probs=84.2
Q ss_pred CCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeEEE
Q 031716 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLIL 101 (154)
Q Consensus 22 ~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l 101 (154)
..++|||+||++.+.. .|..+...+.++|+|+++|+||+|.+.. +.......+++++++..++++++.+++++
T Consensus 33 ~~~~iv~lHG~~~~~~-----~~~~~~~~l~~~~~vi~~D~~G~G~S~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 105 (286)
T PRK03204 33 TGPPILLCHGNPTWSF-----LYRDIIVALRDRFRCVAPDYLGFGLSER--PSGFGYQIDEHARVIGEFVDHLGLDRYLS 105 (286)
T ss_pred CCCEEEEECCCCccHH-----HHHHHHHHHhCCcEEEEECCCCCCCCCC--CCccccCHHHHHHHHHHHHHHhCCCCEEE
Confidence 4578999999875442 4777777777789999999999864432 22223457888889999998888889999
Q ss_pred EEeCcchHHHHHHHhhcCccccEEEEeccCc
Q 031716 102 AGKSMGSRVSCMVACKEDIAASAVLCLGYPL 132 (154)
Q Consensus 102 ~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~ 132 (154)
+||||||.++..++..+|++++++|+++++.
T Consensus 106 vG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~ 136 (286)
T PRK03204 106 MGQDWGGPISMAVAVERADRVRGVVLGNTWF 136 (286)
T ss_pred EEECccHHHHHHHHHhChhheeEEEEECccc
Confidence 9999999999999999999999999887643
No 18
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.76 E-value=3.3e-18 Score=118.89 Aligned_cols=103 Identities=17% Similarity=0.192 Sum_probs=83.6
Q ss_pred CCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeEEE
Q 031716 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLIL 101 (154)
Q Consensus 22 ~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l 101 (154)
++|++|++||++.+.. .|..+++.+..+|+|+++|+||+|.+... . .....+++++.+..+++..+.+++.+
T Consensus 12 ~~~~li~~hg~~~~~~-----~~~~~~~~l~~~~~v~~~d~~G~G~s~~~--~-~~~~~~~~~~~~~~~i~~~~~~~v~l 83 (251)
T TIGR02427 12 GAPVLVFINSLGTDLR-----MWDPVLPALTPDFRVLRYDKRGHGLSDAP--E-GPYSIEDLADDVLALLDHLGIERAVF 83 (251)
T ss_pred CCCeEEEEcCcccchh-----hHHHHHHHhhcccEEEEecCCCCCCCCCC--C-CCCCHHHHHHHHHHHHHHhCCCceEE
Confidence 5789999999988763 46667777778999999999998754321 1 23356788888888888888889999
Q ss_pred EEeCcchHHHHHHHhhcCccccEEEEeccCc
Q 031716 102 AGKSMGSRVSCMVACKEDIAASAVLCLGYPL 132 (154)
Q Consensus 102 ~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~ 132 (154)
+|||+||++++.++.++|++++++++++++.
T Consensus 84 iG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~ 114 (251)
T TIGR02427 84 CGLSLGGLIAQGLAARRPDRVRALVLSNTAA 114 (251)
T ss_pred EEeCchHHHHHHHHHHCHHHhHHHhhccCcc
Confidence 9999999999999999999999999887643
No 19
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.76 E-value=1.9e-17 Score=114.81 Aligned_cols=103 Identities=17% Similarity=0.239 Sum_probs=82.3
Q ss_pred CcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHH-HHHHHHhCCCCeEEE
Q 031716 23 SPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDV-VKGAVAKFPGHPLIL 101 (154)
Q Consensus 23 ~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~i~l 101 (154)
+|+||++||++++.. .|..+...+.++++|+++|+||+|..... ........+++++. +..+++..+.+++++
T Consensus 1 ~~~vv~~hG~~~~~~-----~~~~~~~~L~~~~~v~~~d~~g~G~s~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 74 (251)
T TIGR03695 1 KPVLVFLHGFLGSGA-----DWQALIELLGPHFRCLAIDLPGHGSSQSP-DEIERYDFEEAAQDILATLLDQLGIEPFFL 74 (251)
T ss_pred CCEEEEEcCCCCchh-----hHHHHHHHhcccCeEEEEcCCCCCCCCCC-CccChhhHHHHHHHHHHHHHHHcCCCeEEE
Confidence 368999999998774 47777887778999999999998654332 22234456677766 677777777789999
Q ss_pred EEeCcchHHHHHHHhhcCccccEEEEeccC
Q 031716 102 AGKSMGSRVSCMVACKEDIAASAVLCLGYP 131 (154)
Q Consensus 102 ~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p 131 (154)
+|||+||.+++.++.++|+.+++++++++.
T Consensus 75 ~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~ 104 (251)
T TIGR03695 75 VGYSMGGRIALYYALQYPERVQGLILESGS 104 (251)
T ss_pred EEeccHHHHHHHHHHhCchheeeeEEecCC
Confidence 999999999999999999999999988764
No 20
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.76 E-value=2e-17 Score=123.88 Aligned_cols=107 Identities=20% Similarity=0.221 Sum_probs=80.4
Q ss_pred CCCCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCC--chHHHHHHHHHHHHHHHHHhCCCC
Q 031716 20 TSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAP--PKAEKLVEFHTDVVKGAVAKFPGH 97 (154)
Q Consensus 20 ~~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~ 97 (154)
..+.|+||++||++++.. .|...+..+..+|+|+++|+||+|.+..... .......+.+.+.+..+++..+.+
T Consensus 102 ~~~~p~vvllHG~~~~~~-----~~~~~~~~L~~~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~ 176 (402)
T PLN02894 102 KEDAPTLVMVHGYGASQG-----FFFRNFDALASRFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKNLS 176 (402)
T ss_pred CCCCCEEEEECCCCcchh-----HHHHHHHHHHhCCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHcCCC
Confidence 345689999999988763 3555566666689999999999975443211 111222334566666777777778
Q ss_pred eEEEEEeCcchHHHHHHHhhcCccccEEEEeccC
Q 031716 98 PLILAGKSMGSRVSCMVACKEDIAASAVLCLGYP 131 (154)
Q Consensus 98 ~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p 131 (154)
+++|+||||||++++.++.++|++++++|+++++
T Consensus 177 ~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~ 210 (402)
T PLN02894 177 NFILLGHSFGGYVAAKYALKHPEHVQHLILVGPA 210 (402)
T ss_pred CeEEEEECHHHHHHHHHHHhCchhhcEEEEECCc
Confidence 9999999999999999999999999999999764
No 21
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.76 E-value=1.4e-17 Score=117.56 Aligned_cols=97 Identities=15% Similarity=0.160 Sum_probs=74.9
Q ss_pred CCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeEEE
Q 031716 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLIL 101 (154)
Q Consensus 22 ~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l 101 (154)
+.|+||++||++++.. .|..++..+.++|+|+++|+||+|.+... . ....+++++.+.. ...+++.+
T Consensus 12 g~~~ivllHG~~~~~~-----~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~--~--~~~~~~~~~~l~~----~~~~~~~l 78 (256)
T PRK10349 12 GNVHLVLLHGWGLNAE-----VWRCIDEELSSHFTLHLVDLPGFGRSRGF--G--ALSLADMAEAVLQ----QAPDKAIW 78 (256)
T ss_pred CCCeEEEECCCCCChh-----HHHHHHHHHhcCCEEEEecCCCCCCCCCC--C--CCCHHHHHHHHHh----cCCCCeEE
Confidence 3457999999998774 47777777777899999999999754432 1 1234455544432 34578999
Q ss_pred EEeCcchHHHHHHHhhcCccccEEEEeccC
Q 031716 102 AGKSMGSRVSCMVACKEDIAASAVLCLGYP 131 (154)
Q Consensus 102 ~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p 131 (154)
+||||||.+++.++.++|++++++|+++++
T Consensus 79 vGhS~Gg~ia~~~a~~~p~~v~~lili~~~ 108 (256)
T PRK10349 79 LGWSLGGLVASQIALTHPERVQALVTVASS 108 (256)
T ss_pred EEECHHHHHHHHHHHhChHhhheEEEecCc
Confidence 999999999999999999999999998763
No 22
>PRK10749 lysophospholipase L2; Provisional
Probab=99.75 E-value=2.2e-17 Score=120.81 Aligned_cols=107 Identities=13% Similarity=0.011 Sum_probs=75.7
Q ss_pred CCCcEEEEecCCCCCCCchHHHHHHHHHHhh-cCCeEEEEEcCCCCCCCCCCCCc---hHHHHHHHHHHHHHHHHHh---
Q 031716 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKA-LDAVEVVTFDYPYIAGGKRKAPP---KAEKLVEFHTDVVKGAVAK--- 93 (154)
Q Consensus 21 ~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l-~~~~~v~~~d~~g~g~~~~~~~~---~~~~~~~~~~~~i~~~~~~--- 93 (154)
.++++||++||++++.. .|.++...+ ..||+|+++|+||||.+...... ......+++++++..+++.
T Consensus 52 ~~~~~vll~HG~~~~~~-----~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 126 (330)
T PRK10749 52 HHDRVVVICPGRIESYV-----KYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQ 126 (330)
T ss_pred CCCcEEEEECCccchHH-----HHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHh
Confidence 45678999999987653 344444433 27999999999999754322111 0112344555555544443
Q ss_pred -CCCCeEEEEEeCcchHHHHHHHhhcCccccEEEEeccCc
Q 031716 94 -FPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPL 132 (154)
Q Consensus 94 -~~~~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~ 132 (154)
.+..+++++||||||.++..++.++|+.++++|++++..
T Consensus 127 ~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~ 166 (330)
T PRK10749 127 PGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMF 166 (330)
T ss_pred cCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchh
Confidence 366799999999999999999999999999999998754
No 23
>PLN02578 hydrolase
Probab=99.75 E-value=9.9e-18 Score=123.77 Aligned_cols=102 Identities=20% Similarity=0.213 Sum_probs=82.0
Q ss_pred CCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeEEE
Q 031716 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLIL 101 (154)
Q Consensus 22 ~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l 101 (154)
+.++||++||++++.. .|..++..+.++|+|+++|+||+|.+.... .....+++++.+.++++....+++++
T Consensus 85 ~g~~vvliHG~~~~~~-----~w~~~~~~l~~~~~v~~~D~~G~G~S~~~~---~~~~~~~~a~~l~~~i~~~~~~~~~l 156 (354)
T PLN02578 85 EGLPIVLIHGFGASAF-----HWRYNIPELAKKYKVYALDLLGFGWSDKAL---IEYDAMVWRDQVADFVKEVVKEPAVL 156 (354)
T ss_pred CCCeEEEECCCCCCHH-----HHHHHHHHHhcCCEEEEECCCCCCCCCCcc---cccCHHHHHHHHHHHHHHhccCCeEE
Confidence 4467999999998753 477777777778999999999987544321 23355667777777777777789999
Q ss_pred EEeCcchHHHHHHHhhcCccccEEEEeccC
Q 031716 102 AGKSMGSRVSCMVACKEDIAASAVLCLGYP 131 (154)
Q Consensus 102 ~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p 131 (154)
+|||+||++++.++.++|++++++|+++++
T Consensus 157 vG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~ 186 (354)
T PLN02578 157 VGNSLGGFTALSTAVGYPELVAGVALLNSA 186 (354)
T ss_pred EEECHHHHHHHHHHHhChHhcceEEEECCC
Confidence 999999999999999999999999998754
No 24
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.75 E-value=1.5e-17 Score=118.14 Aligned_cols=104 Identities=19% Similarity=0.290 Sum_probs=83.5
Q ss_pred CCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeEEE
Q 031716 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLIL 101 (154)
Q Consensus 22 ~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l 101 (154)
+.|+||++||++++.. .|..+...+.++|+|+++|+||+|.+.. +.......+++++++..++++.+.++++|
T Consensus 27 ~~~~vv~~hG~~~~~~-----~~~~~~~~l~~~~~vi~~D~~G~G~S~~--~~~~~~~~~~~~~~l~~~i~~~~~~~~~l 99 (278)
T TIGR03056 27 AGPLLLLLHGTGASTH-----SWRDLMPPLARSFRVVAPDLPGHGFTRA--PFRFRFTLPSMAEDLSALCAAEGLSPDGV 99 (278)
T ss_pred CCCeEEEEcCCCCCHH-----HHHHHHHHHhhCcEEEeecCCCCCCCCC--ccccCCCHHHHHHHHHHHHHHcCCCCceE
Confidence 4689999999988763 4666777777789999999999875433 22223456788888888888877788999
Q ss_pred EEeCcchHHHHHHHhhcCccccEEEEeccCc
Q 031716 102 AGKSMGSRVSCMVACKEDIAASAVLCLGYPL 132 (154)
Q Consensus 102 ~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~ 132 (154)
+||||||.+++.++.++|+++++++++++..
T Consensus 100 vG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~ 130 (278)
T TIGR03056 100 IGHSAGAAIALRLALDGPVTPRMVVGINAAL 130 (278)
T ss_pred EEECccHHHHHHHHHhCCcccceEEEEcCcc
Confidence 9999999999999999999999999887654
No 25
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.75 E-value=1.4e-17 Score=118.56 Aligned_cols=110 Identities=15% Similarity=0.192 Sum_probs=93.5
Q ss_pred CCCCCCcEEEEecCCCCCCCchHHHHHHHHHHhhc-CCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCC
Q 031716 18 DDTSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKAL-DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPG 96 (154)
Q Consensus 18 ~~~~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~-~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 96 (154)
.+.++.|+|+++||+..+.. .|...+..++ .+|+|+++|+||+|.+.. ++....+++..++.++..++++++.
T Consensus 39 ~g~~~gP~illlHGfPe~wy-----swr~q~~~la~~~~rviA~DlrGyG~Sd~-P~~~~~Yt~~~l~~di~~lld~Lg~ 112 (322)
T KOG4178|consen 39 GGPGDGPIVLLLHGFPESWY-----SWRHQIPGLASRGYRVIAPDLRGYGFSDA-PPHISEYTIDELVGDIVALLDHLGL 112 (322)
T ss_pred ecCCCCCEEEEEccCCccch-----hhhhhhhhhhhcceEEEecCCCCCCCCCC-CCCcceeeHHHHHHHHHHHHHHhcc
Confidence 45668899999999998763 4666776666 469999999999864443 3333677889999999999999999
Q ss_pred CeEEEEEeCcchHHHHHHHhhcCccccEEEEeccCcc
Q 031716 97 HPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLK 133 (154)
Q Consensus 97 ~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~~ 133 (154)
++++++||+||+++|..++..+|++++++|+++.+..
T Consensus 113 ~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~ 149 (322)
T KOG4178|consen 113 KKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFP 149 (322)
T ss_pred ceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCC
Confidence 9999999999999999999999999999999987776
No 26
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.75 E-value=3.2e-17 Score=116.29 Aligned_cols=107 Identities=14% Similarity=0.185 Sum_probs=80.0
Q ss_pred CCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeEEE
Q 031716 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLIL 101 (154)
Q Consensus 22 ~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l 101 (154)
..++||++||++++. ..+...+...+.. .+|+|+++|+||+|.+............+++++.+..++++.+.+++++
T Consensus 24 ~~~~vl~~hG~~g~~-~~~~~~~~~~l~~--~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 100 (288)
T TIGR01250 24 EKIKLLLLHGGPGMS-HEYLENLRELLKE--EGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDELEEVREKLGLDKFYL 100 (288)
T ss_pred CCCeEEEEcCCCCcc-HHHHHHHHHHHHh--cCCEEEEEcCCCCCCCCCCCcccccccHHHHHHHHHHHHHHcCCCcEEE
Confidence 367899999987665 3333334444433 4899999999998754332111112456788888888888888888999
Q ss_pred EEeCcchHHHHHHHhhcCccccEEEEeccC
Q 031716 102 AGKSMGSRVSCMVACKEDIAASAVLCLGYP 131 (154)
Q Consensus 102 ~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p 131 (154)
+||||||.+++.++..+|+++++++++++.
T Consensus 101 iG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 130 (288)
T TIGR01250 101 LGHSWGGMLAQEYALKYGQHLKGLIISSML 130 (288)
T ss_pred EEeehHHHHHHHHHHhCccccceeeEeccc
Confidence 999999999999999999999999988754
No 27
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.75 E-value=4.9e-17 Score=115.23 Aligned_cols=113 Identities=9% Similarity=-0.050 Sum_probs=78.6
Q ss_pred CCCcEEEEecCCCCCCCchHHHHHHHHHHhhc-CCeEEEEEcCCCCCCCCCCCC-chHHHHHHHHHHHHHHHHHhCCCCe
Q 031716 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKAL-DAVEVVTFDYPYIAGGKRKAP-PKAEKLVEFHTDVVKGAVAKFPGHP 98 (154)
Q Consensus 21 ~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~-~~~~v~~~d~~g~g~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~ 98 (154)
.++++||++||+++... .+...|..+.+.+. .||.|+.+|+||+|.+..... .......+|+...++.+.+ .+.++
T Consensus 23 ~~~~~VlllHG~g~~~~-~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~~~~~~~~~Dv~~ai~~L~~-~~~~~ 100 (266)
T TIGR03101 23 GPRGVVIYLPPFAEEMN-KSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAAARWDVWKEDVAAAYRWLIE-QGHPP 100 (266)
T ss_pred CCceEEEEECCCccccc-chhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccccCCHHHHHHHHHHHHHHHHh-cCCCC
Confidence 34688999999987542 22223555555554 799999999999975433221 1222233445444444433 45679
Q ss_pred EEEEEeCcchHHHHHHHhhcCccccEEEEeccCcccc
Q 031716 99 LILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKVC 135 (154)
Q Consensus 99 i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~~~~ 135 (154)
++|+||||||.+++.++.++|+.++++|+++|...+.
T Consensus 101 v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~g~ 137 (266)
T TIGR03101 101 VTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVSGK 137 (266)
T ss_pred EEEEEECHHHHHHHHHHHhCccccceEEEeccccchH
Confidence 9999999999999999999999999999998766543
No 28
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.75 E-value=4.1e-17 Score=119.33 Aligned_cols=107 Identities=16% Similarity=0.241 Sum_probs=74.8
Q ss_pred CCcEEEEecCCCCCCCchHHHHHHHHHHhhc-CCeEEEEEcCCCCCCCCCCC--CchHHHHHHHHHHHHHHHHHh--CCC
Q 031716 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKAL-DAVEVVTFDYPYIAGGKRKA--PPKAEKLVEFHTDVVKGAVAK--FPG 96 (154)
Q Consensus 22 ~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~-~~~~v~~~d~~g~g~~~~~~--~~~~~~~~~~~~~~i~~~~~~--~~~ 96 (154)
.+++||++||++.+.. | .+..+...+. .||+|+++|+||||.+.... ........+|+.+.++.+... ...
T Consensus 58 ~~~~VvllHG~~~~~~--~--~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~ 133 (330)
T PLN02298 58 PRALIFMVHGYGNDIS--W--TFQSTAIFLAQMGFACFALDLEGHGRSEGLRAYVPNVDLVVEDCLSFFNSVKQREEFQG 133 (330)
T ss_pred CceEEEEEcCCCCCcc--e--ehhHHHHHHHhCCCEEEEecCCCCCCCCCccccCCCHHHHHHHHHHHHHHHHhcccCCC
Confidence 4678999999986642 1 1333333333 69999999999997543211 122334455566666655443 233
Q ss_pred CeEEEEEeCcchHHHHHHHhhcCccccEEEEeccCc
Q 031716 97 HPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPL 132 (154)
Q Consensus 97 ~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~ 132 (154)
.+++|+||||||.+++.++.++|++++++|++++..
T Consensus 134 ~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~ 169 (330)
T PLN02298 134 LPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMC 169 (330)
T ss_pred CCEEEEEecchhHHHHHHHhcCcccceeEEEecccc
Confidence 479999999999999999999999999999998754
No 29
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.73 E-value=6.8e-17 Score=122.66 Aligned_cols=107 Identities=16% Similarity=0.241 Sum_probs=80.0
Q ss_pred CcEEEEecCCCCCCCchHHHHHHHHHH-hhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHH-HHHHHhCCCCeEE
Q 031716 23 SPVVVFAHGAGAPSSSDWMIKWKDMLG-KALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVV-KGAVAKFPGHPLI 100 (154)
Q Consensus 23 ~~~il~lHG~~~~~~~~~~~~~~~~~~-~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~i~ 100 (154)
+++|||+||++++. ..|.......+. ....+|+|+++|+||||.+.. +.......+++++.+ +.+++.++.++++
T Consensus 201 k~~VVLlHG~~~s~-~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~--p~~~~ytl~~~a~~l~~~ll~~lg~~k~~ 277 (481)
T PLN03087 201 KEDVLFIHGFISSS-AFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPK--PADSLYTLREHLEMIERSVLERYKVKSFH 277 (481)
T ss_pred CCeEEEECCCCccH-HHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcC--CCCCcCCHHHHHHHHHHHHHHHcCCCCEE
Confidence 57899999999886 333221112222 222689999999999975433 222234567777777 4678888888999
Q ss_pred EEEeCcchHHHHHHHhhcCccccEEEEeccCc
Q 031716 101 LAGKSMGSRVSCMVACKEDIAASAVLCLGYPL 132 (154)
Q Consensus 101 l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~ 132 (154)
++||||||++++.++.++|++++++|+++++.
T Consensus 278 LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~ 309 (481)
T PLN03087 278 IVAHSLGCILALALAVKHPGAVKSLTLLAPPY 309 (481)
T ss_pred EEEECHHHHHHHHHHHhChHhccEEEEECCCc
Confidence 99999999999999999999999999998764
No 30
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.72 E-value=1e-16 Score=115.60 Aligned_cols=106 Identities=20% Similarity=0.263 Sum_probs=79.6
Q ss_pred cEEEEecCCCCCCCchHHHHHHHHHHhhc-CCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHh----CCCCe
Q 031716 24 PVVVFAHGAGAPSSSDWMIKWKDMLGKAL-DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAK----FPGHP 98 (154)
Q Consensus 24 ~~il~lHG~~~~~~~~~~~~~~~~~~~l~-~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~~~ 98 (154)
.+||++||.+...+ .|.+++..+. +||.|+++|+||||.+.. .........+++.++++.+++. ....+
T Consensus 35 g~Vvl~HG~~Eh~~-----ry~~la~~l~~~G~~V~~~D~RGhG~S~r-~~rg~~~~f~~~~~dl~~~~~~~~~~~~~~p 108 (298)
T COG2267 35 GVVVLVHGLGEHSG-----RYEELADDLAARGFDVYALDLRGHGRSPR-GQRGHVDSFADYVDDLDAFVETIAEPDPGLP 108 (298)
T ss_pred cEEEEecCchHHHH-----HHHHHHHHHHhCCCEEEEecCCCCCCCCC-CCcCCchhHHHHHHHHHHHHHHHhccCCCCC
Confidence 78999999998775 4666666665 899999999999975431 1222222245555555554443 35679
Q ss_pred EEEEEeCcchHHHHHHHhhcCccccEEEEeccCcccc
Q 031716 99 LILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKVC 135 (154)
Q Consensus 99 i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~~~~ 135 (154)
++++||||||.+++.++.+++..++++|+.+|.+...
T Consensus 109 ~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~ 145 (298)
T COG2267 109 VFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLG 145 (298)
T ss_pred eEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCC
Confidence 9999999999999999999999999999998876554
No 31
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.72 E-value=5.3e-17 Score=112.56 Aligned_cols=97 Identities=15% Similarity=0.186 Sum_probs=73.8
Q ss_pred CCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeEEE
Q 031716 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLIL 101 (154)
Q Consensus 22 ~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l 101 (154)
+.|+||++||++++.. .|..+.+.+.++|+|+++|+||+|.+.... ....+++++.+... .. +++++
T Consensus 3 g~~~iv~~HG~~~~~~-----~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~----~~~~~~~~~~~~~~---~~-~~~~l 69 (245)
T TIGR01738 3 GNVHLVLIHGWGMNAE-----VFRCLDEELSAHFTLHLVDLPGHGRSRGFG----PLSLADAAEAIAAQ---AP-DPAIW 69 (245)
T ss_pred CCceEEEEcCCCCchh-----hHHHHHHhhccCeEEEEecCCcCccCCCCC----CcCHHHHHHHHHHh---CC-CCeEE
Confidence 3478999999988774 477777777778999999999987543221 12344555444333 22 58999
Q ss_pred EEeCcchHHHHHHHhhcCccccEEEEeccC
Q 031716 102 AGKSMGSRVSCMVACKEDIAASAVLCLGYP 131 (154)
Q Consensus 102 ~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p 131 (154)
+||||||.+++.++.++|++++++|++++.
T Consensus 70 vG~S~Gg~~a~~~a~~~p~~v~~~il~~~~ 99 (245)
T TIGR01738 70 LGWSLGGLVALHIAATHPDRVRALVTVASS 99 (245)
T ss_pred EEEcHHHHHHHHHHHHCHHhhheeeEecCC
Confidence 999999999999999999999999988653
No 32
>PRK06489 hypothetical protein; Provisional
Probab=99.72 E-value=5.5e-17 Score=120.06 Aligned_cols=108 Identities=13% Similarity=0.055 Sum_probs=75.9
Q ss_pred CcEEEEecCCCCCCCchHH-HHHHHHH-----HhhcCCeEEEEEcCCCCCCCCCCCCc----hHHHHHHHHHHHHHH-HH
Q 031716 23 SPVVVFAHGAGAPSSSDWM-IKWKDML-----GKALDAVEVVTFDYPYIAGGKRKAPP----KAEKLVEFHTDVVKG-AV 91 (154)
Q Consensus 23 ~~~il~lHG~~~~~~~~~~-~~~~~~~-----~~l~~~~~v~~~d~~g~g~~~~~~~~----~~~~~~~~~~~~i~~-~~ 91 (154)
.|+||++||++++.. .|. ..+.+.+ ..+.++|+|+++|+||||.+...... ......+++++.+.. ++
T Consensus 69 gpplvllHG~~~~~~-~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~ 147 (360)
T PRK06489 69 DNAVLVLHGTGGSGK-SFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVT 147 (360)
T ss_pred CCeEEEeCCCCCchh-hhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHH
Confidence 578999999998763 222 1222222 11146899999999999754322110 012356677766655 44
Q ss_pred HhCCCCeEE-EEEeCcchHHHHHHHhhcCccccEEEEeccC
Q 031716 92 AKFPGHPLI-LAGKSMGSRVSCMVACKEDIAASAVLCLGYP 131 (154)
Q Consensus 92 ~~~~~~~i~-l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p 131 (154)
++++.+++. |+||||||++|+.++.++|++++++|++++.
T Consensus 148 ~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~ 188 (360)
T PRK06489 148 EGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQ 188 (360)
T ss_pred HhcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccC
Confidence 777777875 8999999999999999999999999988753
No 33
>PLN02511 hydrolase
Probab=99.71 E-value=2.8e-16 Score=117.33 Aligned_cols=111 Identities=19% Similarity=0.235 Sum_probs=81.0
Q ss_pred CCCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCc-hHHHHHHHHHHHHHHHHHhCCCCeE
Q 031716 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPP-KAEKLVEFHTDVVKGAVAKFPGHPL 99 (154)
Q Consensus 21 ~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~i 99 (154)
.++|+||++||++++....|...+...+. ..||+|+++|+||+|......+. ......+|+.+.++.+..+.+..++
T Consensus 98 ~~~p~vvllHG~~g~s~~~y~~~~~~~~~--~~g~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~~ 175 (388)
T PLN02511 98 ADAPVLILLPGLTGGSDDSYVRHMLLRAR--SKGWRVVVFNSRGCADSPVTTPQFYSASFTGDLRQVVDHVAGRYPSANL 175 (388)
T ss_pred CCCCEEEEECCCCCCCCCHHHHHHHHHHH--HCCCEEEEEecCCCCCCCCCCcCEEcCCchHHHHHHHHHHHHHCCCCCE
Confidence 45789999999988765434322333332 37999999999999654322111 1123456777777777777776799
Q ss_pred EEEEeCcchHHHHHHHhhcCcc--ccEEEEeccCcc
Q 031716 100 ILAGKSMGSRVSCMVACKEDIA--ASAVLCLGYPLK 133 (154)
Q Consensus 100 ~l~G~S~Gg~~a~~~a~~~~~~--i~~~v~~~~p~~ 133 (154)
+++||||||.+++.++.+++++ +.+++++++|+.
T Consensus 176 ~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~ 211 (388)
T PLN02511 176 YAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFD 211 (388)
T ss_pred EEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcC
Confidence 9999999999999999998876 888888888764
No 34
>PRK10985 putative hydrolase; Provisional
Probab=99.71 E-value=3e-16 Score=114.65 Aligned_cols=111 Identities=17% Similarity=0.152 Sum_probs=80.6
Q ss_pred CCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCch-HHHHHHHHHHHHHHHHHhCCCCeEE
Q 031716 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPK-AEKLVEFHTDVVKGAVAKFPGHPLI 100 (154)
Q Consensus 22 ~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~i~ 100 (154)
++|+||++||++++....+...+.+.+.+ .||+|+++|+||+|......... .....+|+...++.+.++.+..+++
T Consensus 57 ~~p~vll~HG~~g~~~~~~~~~~~~~l~~--~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~ 134 (324)
T PRK10985 57 HKPRLVLFHGLEGSFNSPYAHGLLEAAQK--RGWLGVVMHFRGCSGEPNRLHRIYHSGETEDARFFLRWLQREFGHVPTA 134 (324)
T ss_pred CCCEEEEeCCCCCCCcCHHHHHHHHHHHH--CCCEEEEEeCCCCCCCccCCcceECCCchHHHHHHHHHHHHhCCCCCEE
Confidence 46899999999887655454445555554 79999999999986322211111 1123567777777777777778999
Q ss_pred EEEeCcchHHHHHHHhhcCcc--ccEEEEeccCccc
Q 031716 101 LAGKSMGSRVSCMVACKEDIA--ASAVLCLGYPLKV 134 (154)
Q Consensus 101 l~G~S~Gg~~a~~~a~~~~~~--i~~~v~~~~p~~~ 134 (154)
++||||||.++..++.++++. ++++|++++|+..
T Consensus 135 ~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~ 170 (324)
T PRK10985 135 AVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLML 170 (324)
T ss_pred EEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCH
Confidence 999999999988888776543 8899999988753
No 35
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.70 E-value=4e-16 Score=109.86 Aligned_cols=111 Identities=23% Similarity=0.246 Sum_probs=86.1
Q ss_pred CCCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCC--CCCCCCCchHHHHHHHHHHHHHHHHHh--CCC
Q 031716 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIA--GGKRKAPPKAEKLVEFHTDVVKGAVAK--FPG 96 (154)
Q Consensus 21 ~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g--~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~ 96 (154)
..+..|+++||++.... -..+.++..+.. .||.|+++|++||| .|.+.+.++.+..++|.......++.+ .+.
T Consensus 52 ~pr~lv~~~HG~g~~~s-~~~~~~a~~l~~--~g~~v~a~D~~GhG~SdGl~~yi~~~d~~v~D~~~~~~~i~~~~e~~~ 128 (313)
T KOG1455|consen 52 EPRGLVFLCHGYGEHSS-WRYQSTAKRLAK--SGFAVYAIDYEGHGRSDGLHAYVPSFDLVVDDVISFFDSIKEREENKG 128 (313)
T ss_pred CCceEEEEEcCCcccch-hhHHHHHHHHHh--CCCeEEEeeccCCCcCCCCcccCCcHHHHHHHHHHHHHHHhhccccCC
Confidence 56778999999998752 222234444444 89999999999997 344445667777888888888876543 566
Q ss_pred CeEEEEEeCcchHHHHHHHhhcCccccEEEEeccCccc
Q 031716 97 HPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKV 134 (154)
Q Consensus 97 ~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~~~ 134 (154)
.+.+++||||||.+++.++.++|+..+|+|+++|-+.-
T Consensus 129 lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i 166 (313)
T KOG1455|consen 129 LPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKI 166 (313)
T ss_pred CCeeeeecCcchHHHHHHHhhCCcccccceeeeccccc
Confidence 79999999999999999999999999999999875543
No 36
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.70 E-value=3.2e-16 Score=115.96 Aligned_cols=103 Identities=17% Similarity=0.197 Sum_probs=83.4
Q ss_pred CCCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeEE
Q 031716 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLI 100 (154)
Q Consensus 21 ~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~ 100 (154)
++.+++|++||++++.. .|..+...+..+|+|+++|+||+|...... . ....+++++.+..+++..+..+++
T Consensus 129 ~~~~~vl~~HG~~~~~~-----~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~ 200 (371)
T PRK14875 129 GDGTPVVLIHGFGGDLN-----NWLFNHAALAAGRPVIALDLPGHGASSKAV-G--AGSLDELAAAVLAFLDALGIERAH 200 (371)
T ss_pred CCCCeEEEECCCCCccc-----hHHHHHHHHhcCCEEEEEcCCCCCCCCCCC-C--CCCHHHHHHHHHHHHHhcCCccEE
Confidence 44688999999998874 466777777778999999999987442211 1 234677788888888888878999
Q ss_pred EEEeCcchHHHHHHHhhcCccccEEEEeccC
Q 031716 101 LAGKSMGSRVSCMVACKEDIAASAVLCLGYP 131 (154)
Q Consensus 101 l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p 131 (154)
|+|||+||.+++.++.++|+++.++++++++
T Consensus 201 lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~ 231 (371)
T PRK14875 201 LVGHSMGGAVALRLAARAPQRVASLTLIAPA 231 (371)
T ss_pred EEeechHHHHHHHHHHhCchheeEEEEECcC
Confidence 9999999999999999999999999999765
No 37
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.70 E-value=1.2e-16 Score=116.51 Aligned_cols=107 Identities=22% Similarity=0.320 Sum_probs=89.2
Q ss_pred CCCcEEEEecCCCCCCCchHHHHHHHHHHhhcCC--eEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCe
Q 031716 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDA--VEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHP 98 (154)
Q Consensus 21 ~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~--~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 98 (154)
..+++||++||++++.. .|.+....+.+. +.|+++|++|+|.++. .+....+...++.+.++.+.......+
T Consensus 56 ~~~~pvlllHGF~~~~~-----~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~-~~~~~~y~~~~~v~~i~~~~~~~~~~~ 129 (326)
T KOG1454|consen 56 KDKPPVLLLHGFGASSF-----SWRRVVPLLSKAKGLRVLAIDLPGHGYSSP-LPRGPLYTLRELVELIRRFVKEVFVEP 129 (326)
T ss_pred CCCCcEEEeccccCCcc-----cHhhhccccccccceEEEEEecCCCCcCCC-CCCCCceehhHHHHHHHHHHHhhcCcc
Confidence 46789999999999875 588888888755 9999999999763333 344445778999999999998888888
Q ss_pred EEEEEeCcchHHHHHHHhhcCccccEEE---EeccCcc
Q 031716 99 LILAGKSMGSRVSCMVACKEDIAASAVL---CLGYPLK 133 (154)
Q Consensus 99 i~l~G~S~Gg~~a~~~a~~~~~~i~~~v---~~~~p~~ 133 (154)
++++|||+||.+|+.+|..+|+.++.++ +++++..
T Consensus 130 ~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~ 167 (326)
T KOG1454|consen 130 VSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVY 167 (326)
T ss_pred eEEEEeCcHHHHHHHHHHhCcccccceeeecccccccc
Confidence 9999999999999999999999999999 5555543
No 38
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.69 E-value=4e-16 Score=113.08 Aligned_cols=105 Identities=17% Similarity=0.132 Sum_probs=78.1
Q ss_pred CCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeEEE
Q 031716 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLIL 101 (154)
Q Consensus 22 ~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l 101 (154)
+.++||++||+.++... + .+...+. ..+|+|+++|+||+|.+.... .......+++++++..++++++.+++++
T Consensus 26 ~~~~lvllHG~~~~~~~-~--~~~~~~~--~~~~~vi~~D~~G~G~S~~~~-~~~~~~~~~~~~dl~~l~~~l~~~~~~l 99 (306)
T TIGR01249 26 DGKPVVFLHGGPGSGTD-P--GCRRFFD--PETYRIVLFDQRGCGKSTPHA-CLEENTTWDLVADIEKLREKLGIKNWLV 99 (306)
T ss_pred CCCEEEEECCCCCCCCC-H--HHHhccC--ccCCEEEEECCCCCCCCCCCC-CcccCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 35679999998776532 1 1222222 258999999999987443221 1122345677888888888888889999
Q ss_pred EEeCcchHHHHHHHhhcCccccEEEEeccCc
Q 031716 102 AGKSMGSRVSCMVACKEDIAASAVLCLGYPL 132 (154)
Q Consensus 102 ~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~ 132 (154)
+||||||.+++.++.++|++++++|++++..
T Consensus 100 vG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~ 130 (306)
T TIGR01249 100 FGGSWGSTLALAYAQTHPEVVTGLVLRGIFL 130 (306)
T ss_pred EEECHHHHHHHHHHHHChHhhhhheeecccc
Confidence 9999999999999999999999999987644
No 39
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.68 E-value=1.9e-16 Score=116.88 Aligned_cols=111 Identities=17% Similarity=0.085 Sum_probs=81.9
Q ss_pred CCcEEEEecCCCCCCCchH-H-----HHHHHHHH---hh-cCCeEEEEEcCCCCCCCCCCC----Cc-------hHHHHH
Q 031716 22 SSPVVVFAHGAGAPSSSDW-M-----IKWKDMLG---KA-LDAVEVVTFDYPYIAGGKRKA----PP-------KAEKLV 80 (154)
Q Consensus 22 ~~~~il~lHG~~~~~~~~~-~-----~~~~~~~~---~l-~~~~~v~~~d~~g~g~~~~~~----~~-------~~~~~~ 80 (154)
..++||++||++++..... . ..|..++. .+ .++|+|+++|+||++.|++.. +. .....+
T Consensus 30 ~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~ 109 (351)
T TIGR01392 30 RSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLITI 109 (351)
T ss_pred CCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcH
Confidence 3578999999999763210 0 02455541 22 478999999999932222211 11 113467
Q ss_pred HHHHHHHHHHHHhCCCCe-EEEEEeCcchHHHHHHHhhcCccccEEEEeccCc
Q 031716 81 EFHTDVVKGAVAKFPGHP-LILAGKSMGSRVSCMVACKEDIAASAVLCLGYPL 132 (154)
Q Consensus 81 ~~~~~~i~~~~~~~~~~~-i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~ 132 (154)
+++++++..++++++.++ ++|+||||||++++.++.++|++++++|++++..
T Consensus 110 ~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 162 (351)
T TIGR01392 110 RDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSA 162 (351)
T ss_pred HHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCC
Confidence 899999999999998888 9999999999999999999999999999998754
No 40
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.66 E-value=2.1e-15 Score=112.65 Aligned_cols=107 Identities=18% Similarity=0.207 Sum_probs=75.8
Q ss_pred CCCCcEEEEecCCCCCCCchHHHHHHHHHHhhc-CCeEEEEEcCCCCCCCCCC--CCchHHHHHHHHHHHHHHHHHhCCC
Q 031716 20 TSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKAL-DAVEVVTFDYPYIAGGKRK--APPKAEKLVEFHTDVVKGAVAKFPG 96 (154)
Q Consensus 20 ~~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~-~~~~v~~~d~~g~g~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~ 96 (154)
+..+++||++||++++.. .|..+...+. .||+|+++|+||||.+... .....+...+|+.+.++.+....+.
T Consensus 133 ~~~~~~Vl~lHG~~~~~~-----~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~ 207 (395)
T PLN02652 133 GEMRGILIIIHGLNEHSG-----RYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVPSLDYVVEDTEAFLEKIRSENPG 207 (395)
T ss_pred CCCceEEEEECCchHHHH-----HHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCC
Confidence 345679999999987653 2444555553 7999999999999744322 1123344456666666666655555
Q ss_pred CeEEEEEeCcchHHHHHHHhhcC---ccccEEEEeccCc
Q 031716 97 HPLILAGKSMGSRVSCMVACKED---IAASAVLCLGYPL 132 (154)
Q Consensus 97 ~~i~l~G~S~Gg~~a~~~a~~~~---~~i~~~v~~~~p~ 132 (154)
.+++++||||||.+++.++. +| ++++++|+.+|.+
T Consensus 208 ~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l 245 (395)
T PLN02652 208 VPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPAL 245 (395)
T ss_pred CCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECccc
Confidence 68999999999999998775 44 4799999988764
No 41
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.64 E-value=1.3e-15 Score=113.50 Aligned_cols=109 Identities=14% Similarity=0.045 Sum_probs=81.8
Q ss_pred CcEEEEecCCCCCCCchHHH---------HHHHHHH---hh-cCCeEEEEEcCCCCCCCCCCCC----c-h-------HH
Q 031716 23 SPVVVFAHGAGAPSSSDWMI---------KWKDMLG---KA-LDAVEVVTFDYPYIAGGKRKAP----P-K-------AE 77 (154)
Q Consensus 23 ~~~il~lHG~~~~~~~~~~~---------~~~~~~~---~l-~~~~~v~~~d~~g~g~~~~~~~----~-~-------~~ 77 (154)
.|+||++||++++.. .+.. .|..++. .+ .++|+|+++|++|+..+++... . . ..
T Consensus 48 ~p~vvl~HG~~~~~~-~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~ 126 (379)
T PRK00175 48 SNAVLICHALTGDHH-VAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPV 126 (379)
T ss_pred CCEEEEeCCcCCchh-hcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCc
Confidence 689999999999873 2211 2555542 23 4789999999998422221110 0 0 13
Q ss_pred HHHHHHHHHHHHHHHhCCCCe-EEEEEeCcchHHHHHHHhhcCccccEEEEeccCc
Q 031716 78 KLVEFHTDVVKGAVAKFPGHP-LILAGKSMGSRVSCMVACKEDIAASAVLCLGYPL 132 (154)
Q Consensus 78 ~~~~~~~~~i~~~~~~~~~~~-i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~ 132 (154)
..++++++++..++++++.++ ++++||||||++++.++.++|++++++|++++..
T Consensus 127 ~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 182 (379)
T PRK00175 127 ITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSA 182 (379)
T ss_pred CCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCc
Confidence 467899999999999999888 5899999999999999999999999999997654
No 42
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.64 E-value=2.1e-15 Score=110.95 Aligned_cols=102 Identities=16% Similarity=0.188 Sum_probs=74.9
Q ss_pred EEEEecCCCCCCCchHHH--------HHHHHHH---hh-cCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHH
Q 031716 25 VVVFAHGAGAPSSSDWMI--------KWKDMLG---KA-LDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVA 92 (154)
Q Consensus 25 ~il~lHG~~~~~~~~~~~--------~~~~~~~---~l-~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~ 92 (154)
++|++||+.++.. .+.. .|..++. .| ..+|+|+++|+||+|.+.. . ....+++++++..+++
T Consensus 59 p~vll~g~~~~~~-~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~---~--~~~~~~~a~dl~~ll~ 132 (343)
T PRK08775 59 PVVFVAGGISAHR-HVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLD---V--PIDTADQADAIALLLD 132 (343)
T ss_pred CEEEEecCCCccc-ccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCC---C--CCCHHHHHHHHHHHHH
Confidence 4677766666542 1000 2666664 45 3689999999999854321 1 1234677888888998
Q ss_pred hCCCCeE-EEEEeCcchHHHHHHHhhcCccccEEEEeccCc
Q 031716 93 KFPGHPL-ILAGKSMGSRVSCMVACKEDIAASAVLCLGYPL 132 (154)
Q Consensus 93 ~~~~~~i-~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~ 132 (154)
+++.++. +|+||||||++++.++.++|++++++|++++..
T Consensus 133 ~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~ 173 (343)
T PRK08775 133 ALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAH 173 (343)
T ss_pred HcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccc
Confidence 8887664 799999999999999999999999999997643
No 43
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.63 E-value=2.6e-15 Score=127.82 Aligned_cols=104 Identities=19% Similarity=0.309 Sum_probs=83.4
Q ss_pred CCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCC-----chHHHHHHHHHHHHHHHHHhCCC
Q 031716 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAP-----PKAEKLVEFHTDVVKGAVAKFPG 96 (154)
Q Consensus 22 ~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~-----~~~~~~~~~~~~~i~~~~~~~~~ 96 (154)
+.++|||+||++++.. .|..+...+..+|+|+++|+||||.+..... .......+++++.+..++++++.
T Consensus 1370 ~~~~vVllHG~~~s~~-----~w~~~~~~L~~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~~ 1444 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGE-----DWIPIMKAISGSARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHITP 1444 (1655)
T ss_pred CCCeEEEECCCCCCHH-----HHHHHHHHHhCCCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHhCC
Confidence 4578999999999874 4667777777789999999999975432110 11233567788888888888888
Q ss_pred CeEEEEEeCcchHHHHHHHhhcCccccEEEEecc
Q 031716 97 HPLILAGKSMGSRVSCMVACKEDIAASAVLCLGY 130 (154)
Q Consensus 97 ~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~ 130 (154)
++++|+||||||.+++.++.++|++++++|++++
T Consensus 1445 ~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~ 1478 (1655)
T PLN02980 1445 GKVTLVGYSMGARIALYMALRFSDKIEGAVIISG 1478 (1655)
T ss_pred CCEEEEEECHHHHHHHHHHHhChHhhCEEEEECC
Confidence 8999999999999999999999999999998865
No 44
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.63 E-value=8.7e-15 Score=107.30 Aligned_cols=110 Identities=14% Similarity=0.147 Sum_probs=74.8
Q ss_pred CCCcEEEEecCCCCCCCchHH------------------------HHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCC---
Q 031716 21 SSSPVVVFAHGAGAPSSSDWM------------------------IKWKDMLGKALDAVEVVTFDYPYIAGGKRKAP--- 73 (154)
Q Consensus 21 ~~~~~il~lHG~~~~~~~~~~------------------------~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~--- 73 (154)
.++.+|+++||.++..+.+++ ..|.+.+.+ .||.|+++|+||||.+.....
T Consensus 19 ~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~--~G~~V~~~D~rGHG~S~~~~~~~g 96 (332)
T TIGR01607 19 NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNK--NGYSVYGLDLQGHGESDGLQNLRG 96 (332)
T ss_pred CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHH--CCCcEEEecccccCCCcccccccc
Confidence 467799999999988753332 123444544 799999999999974432211
Q ss_pred --chHHHHHHHHHHHHHHHHH-------------------hCC-CCeEEEEEeCcchHHHHHHHhhcCc--------ccc
Q 031716 74 --PKAEKLVEFHTDVVKGAVA-------------------KFP-GHPLILAGKSMGSRVSCMVACKEDI--------AAS 123 (154)
Q Consensus 74 --~~~~~~~~~~~~~i~~~~~-------------------~~~-~~~i~l~G~S~Gg~~a~~~a~~~~~--------~i~ 123 (154)
......++|+.+.++.+.+ ..+ ..+++|+||||||.+++.++.++++ .++
T Consensus 97 ~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~ 176 (332)
T TIGR01607 97 HINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELLGKSNENNDKLNIK 176 (332)
T ss_pred chhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHhccccccccccccc
Confidence 2334444555555554443 122 4589999999999999999875432 588
Q ss_pred EEEEeccCc
Q 031716 124 AVLCLGYPL 132 (154)
Q Consensus 124 ~~v~~~~p~ 132 (154)
++|++++++
T Consensus 177 g~i~~s~~~ 185 (332)
T TIGR01607 177 GCISLSGMI 185 (332)
T ss_pred eEEEeccce
Confidence 999888765
No 45
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.62 E-value=2e-14 Score=107.76 Aligned_cols=112 Identities=15% Similarity=0.169 Sum_probs=75.6
Q ss_pred CCCcEEEEecCCCCCCC-chHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCc---hHHHHHHHHHHHHHHHHHh--C
Q 031716 21 SSSPVVVFAHGAGAPSS-SDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPP---KAEKLVEFHTDVVKGAVAK--F 94 (154)
Q Consensus 21 ~~~~~il~lHG~~~~~~-~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~---~~~~~~~~~~~~i~~~~~~--~ 94 (154)
..+|++|++||++.+.. ..|...+.+.+.....+++|+++|+++++... ++. ......+++++.++.+.+. +
T Consensus 39 ~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~--y~~a~~~t~~vg~~la~lI~~L~~~~gl 116 (442)
T TIGR03230 39 HETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQH--YPTSAAYTKLVGKDVAKFVNWMQEEFNY 116 (442)
T ss_pred CCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCC--CccccccHHHHHHHHHHHHHHHHHhhCC
Confidence 46789999999987542 33433233222111247999999999975322 222 1222334455555555443 3
Q ss_pred CCCeEEEEEeCcchHHHHHHHhhcCccccEEEEeccCccc
Q 031716 95 PGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKV 134 (154)
Q Consensus 95 ~~~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~~~ 134 (154)
+.+++.|+||||||.+|..++...++++.++++++|.-+.
T Consensus 117 ~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP~ 156 (442)
T TIGR03230 117 PWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGPT 156 (442)
T ss_pred CCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCCc
Confidence 5679999999999999999999999999999999886543
No 46
>PRK11071 esterase YqiA; Provisional
Probab=99.62 E-value=9.8e-15 Score=99.09 Aligned_cols=92 Identities=15% Similarity=0.251 Sum_probs=70.3
Q ss_pred cEEEEecCCCCCCCchHH-HHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeEEEE
Q 031716 24 PVVVFAHGAGAPSSSDWM-IKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILA 102 (154)
Q Consensus 24 ~~il~lHG~~~~~~~~~~-~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~ 102 (154)
|+||++||++++.. .|. ..+...+.....+++++++|+||++ +++++.+..++++.+.+++.++
T Consensus 2 p~illlHGf~ss~~-~~~~~~~~~~l~~~~~~~~v~~~dl~g~~--------------~~~~~~l~~l~~~~~~~~~~lv 66 (190)
T PRK11071 2 STLLYLHGFNSSPR-SAKATLLKNWLAQHHPDIEMIVPQLPPYP--------------ADAAELLESLVLEHGGDPLGLV 66 (190)
T ss_pred CeEEEECCCCCCcc-hHHHHHHHHHHHHhCCCCeEEeCCCCCCH--------------HHHHHHHHHHHHHcCCCCeEEE
Confidence 57999999999884 332 2234444443358999999999862 3566777788888788899999
Q ss_pred EeCcchHHHHHHHhhcCccccEEEEeccCcc
Q 031716 103 GKSMGSRVSCMVACKEDIAASAVLCLGYPLK 133 (154)
Q Consensus 103 G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~~ 133 (154)
|||+||++++.++.++|. .+|+++++..
T Consensus 67 G~S~Gg~~a~~~a~~~~~---~~vl~~~~~~ 94 (190)
T PRK11071 67 GSSLGGYYATWLSQCFML---PAVVVNPAVR 94 (190)
T ss_pred EECHHHHHHHHHHHHcCC---CEEEECCCCC
Confidence 999999999999999883 3577877765
No 47
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.62 E-value=1.1e-14 Score=104.08 Aligned_cols=112 Identities=15% Similarity=0.204 Sum_probs=77.2
Q ss_pred CCCCcEEEEecCCCCCCCchHHHHHHH-HHHhhcCCeEEEEEcCCCCCCCCCCCCch---HHHHHHHHHHHHHHHHHh--
Q 031716 20 TSSSPVVVFAHGAGAPSSSDWMIKWKD-MLGKALDAVEVVTFDYPYIAGGKRKAPPK---AEKLVEFHTDVVKGAVAK-- 93 (154)
Q Consensus 20 ~~~~~~il~lHG~~~~~~~~~~~~~~~-~~~~l~~~~~v~~~d~~g~g~~~~~~~~~---~~~~~~~~~~~i~~~~~~-- 93 (154)
..++|++|++||++++....|...+.+ ++.. .+++|+++||+++. ...++.. .....+++++.++.+.+.
T Consensus 33 ~~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~--~~~nVi~vD~~~~~--~~~y~~a~~~~~~v~~~la~~l~~L~~~~g 108 (275)
T cd00707 33 NPSRPTRFIIHGWTSSGEESWISDLRKAYLSR--GDYNVIVVDWGRGA--NPNYPQAVNNTRVVGAELAKFLDFLVDNTG 108 (275)
T ss_pred CCCCCcEEEEcCCCCCCCCcHHHHHHHHHHhc--CCCEEEEEECcccc--ccChHHHHHhHHHHHHHHHHHHHHHHHhcC
Confidence 446789999999998874444333332 2222 58999999999862 2212211 111234455556665554
Q ss_pred CCCCeEEEEEeCcchHHHHHHHhhcCccccEEEEeccCcccc
Q 031716 94 FPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKVC 135 (154)
Q Consensus 94 ~~~~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~~~~ 135 (154)
.+.++++++|||+||.+|..++.+++++++++++++|..+..
T Consensus 109 ~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p~f 150 (275)
T cd00707 109 LSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGPLF 150 (275)
T ss_pred CChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCcccc
Confidence 345789999999999999999999999999999998876543
No 48
>PRK07581 hypothetical protein; Validated
Probab=99.61 E-value=1.7e-15 Score=111.15 Aligned_cols=106 Identities=8% Similarity=-0.028 Sum_probs=71.1
Q ss_pred CCcEEEEecCCCCCCCchHHHHHHHHH---Hhhc-CCeEEEEEcCCCCCCCCCCCCc--hH--H-----HHHHHHHHHHH
Q 031716 22 SSPVVVFAHGAGAPSSSDWMIKWKDML---GKAL-DAVEVVTFDYPYIAGGKRKAPP--KA--E-----KLVEFHTDVVK 88 (154)
Q Consensus 22 ~~~~il~lHG~~~~~~~~~~~~~~~~~---~~l~-~~~~v~~~d~~g~g~~~~~~~~--~~--~-----~~~~~~~~~i~ 88 (154)
..|+||+.||++++... |..++ ..+. .+|+|+++|+||+|.+...... .. . ...+++.....
T Consensus 40 ~~~~vll~~~~~~~~~~-----~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (339)
T PRK07581 40 KDNAILYPTWYSGTHQD-----NEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHR 114 (339)
T ss_pred CCCEEEEeCCCCCCccc-----chhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHH
Confidence 44667777777765431 22221 2343 6899999999999754432110 00 0 12244444444
Q ss_pred HHHHhCCCCeE-EEEEeCcchHHHHHHHhhcCccccEEEEeccCc
Q 031716 89 GAVAKFPGHPL-ILAGKSMGSRVSCMVACKEDIAASAVLCLGYPL 132 (154)
Q Consensus 89 ~~~~~~~~~~i-~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~ 132 (154)
.++++++.+++ +|+||||||++|+.++.++|++++++|++++..
T Consensus 115 ~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~ 159 (339)
T PRK07581 115 LLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTA 159 (339)
T ss_pred HHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCC
Confidence 46677888894 799999999999999999999999999986543
No 49
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.60 E-value=1.8e-14 Score=97.35 Aligned_cols=105 Identities=15% Similarity=0.099 Sum_probs=77.9
Q ss_pred CcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHh---CCCCeE
Q 031716 23 SPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAK---FPGHPL 99 (154)
Q Consensus 23 ~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~~~i 99 (154)
+..|+++||+.|+. ++.. .+.+.+++ +||.|.+|.+||||... .+-.....+||.+.+.+..++ ...+.|
T Consensus 15 ~~AVLllHGFTGt~-~Dvr-~Lgr~L~e--~GyTv~aP~ypGHG~~~---e~fl~t~~~DW~~~v~d~Y~~L~~~gy~eI 87 (243)
T COG1647 15 NRAVLLLHGFTGTP-RDVR-MLGRYLNE--NGYTVYAPRYPGHGTLP---EDFLKTTPRDWWEDVEDGYRDLKEAGYDEI 87 (243)
T ss_pred CEEEEEEeccCCCc-HHHH-HHHHHHHH--CCceEecCCCCCCCCCH---HHHhcCCHHHHHHHHHHHHHHHHHcCCCeE
Confidence 37899999999987 4433 46666666 89999999999986321 111223455666655544443 245689
Q ss_pred EEEEeCcchHHHHHHHhhcCccccEEEEeccCccccc
Q 031716 100 ILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKVCY 136 (154)
Q Consensus 100 ~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~~~~~ 136 (154)
.++|.||||.+++.+|..+| ++++|.+++|.....
T Consensus 88 ~v~GlSmGGv~alkla~~~p--~K~iv~m~a~~~~k~ 122 (243)
T COG1647 88 AVVGLSMGGVFALKLAYHYP--PKKIVPMCAPVNVKS 122 (243)
T ss_pred EEEeecchhHHHHHHHhhCC--ccceeeecCCccccc
Confidence 99999999999999999987 899999998887543
No 50
>PRK10566 esterase; Provisional
Probab=99.58 E-value=5.2e-14 Score=99.00 Aligned_cols=105 Identities=14% Similarity=0.180 Sum_probs=69.0
Q ss_pred CCCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCc-h-------HHHHHHHHHHHHHHHHH
Q 031716 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPP-K-------AEKLVEFHTDVVKGAVA 92 (154)
Q Consensus 21 ~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~-~-------~~~~~~~~~~~i~~~~~ 92 (154)
++.|+||++||++++. ..+. .+.+.+.. .||+|+++|+||+|.+...... . .....+++.+.+..+.+
T Consensus 25 ~~~p~vv~~HG~~~~~-~~~~-~~~~~l~~--~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 100 (249)
T PRK10566 25 TPLPTVFFYHGFTSSK-LVYS-YFAVALAQ--AGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAIRE 100 (249)
T ss_pred CCCCEEEEeCCCCccc-chHH-HHHHHHHh--CCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHh
Confidence 3468999999998876 3222 24444443 6999999999998643221111 1 11234555555666555
Q ss_pred h--CCCCeEEEEEeCcchHHHHHHHhhcCccccEEEEec
Q 031716 93 K--FPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLG 129 (154)
Q Consensus 93 ~--~~~~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~ 129 (154)
+ .+.+++.++|||+||.+++.++.++|+....+++++
T Consensus 101 ~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~ 139 (249)
T PRK10566 101 EGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMG 139 (249)
T ss_pred cCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeC
Confidence 4 345789999999999999999988876444444443
No 51
>PRK05855 short chain dehydrogenase; Validated
Probab=99.57 E-value=1.7e-14 Score=112.42 Aligned_cols=106 Identities=16% Similarity=0.193 Sum_probs=75.8
Q ss_pred CCCCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCC-e
Q 031716 20 TSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGH-P 98 (154)
Q Consensus 20 ~~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~ 98 (154)
..+.|+|||+||++++.. .|..+.+.+..+|+|+++|+||||.+... ........+++++++..+++..+.. +
T Consensus 22 ~~~~~~ivllHG~~~~~~-----~w~~~~~~L~~~~~Vi~~D~~G~G~S~~~-~~~~~~~~~~~a~dl~~~i~~l~~~~~ 95 (582)
T PRK05855 22 DPDRPTVVLVHGYPDNHE-----VWDGVAPLLADRFRVVAYDVRGAGRSSAP-KRTAAYTLARLADDFAAVIDAVSPDRP 95 (582)
T ss_pred CCCCCeEEEEcCCCchHH-----HHHHHHHHhhcceEEEEecCCCCCCCCCC-CcccccCHHHHHHHHHHHHHHhCCCCc
Confidence 334689999999998763 46667777767999999999999754432 2222345678888888888876654 4
Q ss_pred EEEEEeCcchHHHHHHHhh--cCccccEEEEeccC
Q 031716 99 LILAGKSMGSRVSCMVACK--EDIAASAVLCLGYP 131 (154)
Q Consensus 99 i~l~G~S~Gg~~a~~~a~~--~~~~i~~~v~~~~p 131 (154)
++|+||||||.+++.++.+ .++.+..++.++.+
T Consensus 96 ~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~ 130 (582)
T PRK05855 96 VHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGP 130 (582)
T ss_pred EEEEecChHHHHHHHHHhCccchhhhhhheeccCC
Confidence 9999999999999888776 23444444444433
No 52
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.56 E-value=1.8e-13 Score=97.87 Aligned_cols=110 Identities=10% Similarity=0.069 Sum_probs=73.7
Q ss_pred CCcEEEEecCCCCCCCchHHHHHHHHHHhhc-CCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhC-CCCeE
Q 031716 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKAL-DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKF-PGHPL 99 (154)
Q Consensus 22 ~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~-~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~i 99 (154)
..+.+|++||+.......+. .+..+.+.+. .||.++++|+||+|.+.. .........+|+.+.++.+.+.. +.+++
T Consensus 25 ~~~~vv~i~gg~~~~~g~~~-~~~~la~~l~~~G~~v~~~Dl~G~G~S~~-~~~~~~~~~~d~~~~~~~l~~~~~g~~~i 102 (274)
T TIGR03100 25 HTTGVLIVVGGPQYRVGSHR-QFVLLARRLAEAGFPVLRFDYRGMGDSEG-ENLGFEGIDADIAAAIDAFREAAPHLRRI 102 (274)
T ss_pred CCCeEEEEeCCccccCCchh-HHHHHHHHHHHCCCEEEEeCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHHhhCCCCCcE
Confidence 34567777775532211111 2344444443 799999999999975432 22233444566777777766554 34679
Q ss_pred EEEEeCcchHHHHHHHhhcCccccEEEEeccCccc
Q 031716 100 ILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKV 134 (154)
Q Consensus 100 ~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~~~ 134 (154)
+++|||+||.+++.++.. +.+++++|++++++..
T Consensus 103 ~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~ 136 (274)
T TIGR03100 103 VAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRT 136 (274)
T ss_pred EEEEECHHHHHHHHHhhh-CCCccEEEEECCccCC
Confidence 999999999999999865 4679999999987543
No 53
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.55 E-value=1.4e-13 Score=103.62 Aligned_cols=107 Identities=18% Similarity=0.238 Sum_probs=69.6
Q ss_pred CCCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHH-HHHHHHHHh--CCCC
Q 031716 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHT-DVVKGAVAK--FPGH 97 (154)
Q Consensus 21 ~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~-~~i~~~~~~--~~~~ 97 (154)
++.|+||+.||.++.....| ..+.+.+.. .||.|+++|+||+|.+...... ....... ..++.+... .+.+
T Consensus 192 ~~~P~Vli~gG~~~~~~~~~-~~~~~~La~--~Gy~vl~~D~pG~G~s~~~~~~---~d~~~~~~avld~l~~~~~vd~~ 265 (414)
T PRK05077 192 GPFPTVLVCGGLDSLQTDYY-RLFRDYLAP--RGIAMLTIDMPSVGFSSKWKLT---QDSSLLHQAVLNALPNVPWVDHT 265 (414)
T ss_pred CCccEEEEeCCcccchhhhH-HHHHHHHHh--CCCEEEEECCCCCCCCCCCCcc---ccHHHHHHHHHHHHHhCcccCcc
Confidence 45677777777665432212 123333333 7999999999998754332111 1112222 233333332 2557
Q ss_pred eEEEEEeCcchHHHHHHHhhcCccccEEEEeccCcc
Q 031716 98 PLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLK 133 (154)
Q Consensus 98 ~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~~ 133 (154)
+|.++|||+||++++.++..+|++++++|+++++..
T Consensus 266 ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~ 301 (414)
T PRK05077 266 RVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVH 301 (414)
T ss_pred cEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccc
Confidence 999999999999999999988989999999988764
No 54
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.54 E-value=1.4e-13 Score=96.13 Aligned_cols=103 Identities=14% Similarity=0.233 Sum_probs=70.9
Q ss_pred CCCCcEEEEecCCCCCCCchHHHHHHHHHHhhc--CCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhC---
Q 031716 20 TSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKAL--DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKF--- 94 (154)
Q Consensus 20 ~~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~--~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~--- 94 (154)
....|+++++||+|.+. -. |+-+...+. -.++++++|+||||......++ +...+.+.+++-.+++.+
T Consensus 71 ~t~gpil~l~HG~G~S~-LS----fA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~--dlS~eT~~KD~~~~i~~~fge 143 (343)
T KOG2564|consen 71 ATEGPILLLLHGGGSSA-LS----FAIFASELKSKIRCRCLALDLRGHGETKVENED--DLSLETMSKDFGAVIKELFGE 143 (343)
T ss_pred CCCccEEEEeecCcccc-hh----HHHHHHHHHhhcceeEEEeeccccCccccCChh--hcCHHHHHHHHHHHHHHHhcc
Confidence 44678999999999987 43 444444443 4788899999999765554333 234445555544444432
Q ss_pred CCCeEEEEEeCcchHHHHHHHhh--cCccccEEEEecc
Q 031716 95 PGHPLILAGKSMGSRVSCMVACK--EDIAASAVLCLGY 130 (154)
Q Consensus 95 ~~~~i~l~G~S~Gg~~a~~~a~~--~~~~i~~~v~~~~ 130 (154)
...+|+|+||||||.+|...+.. -|. +.|++.++-
T Consensus 144 ~~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDV 180 (343)
T KOG2564|consen 144 LPPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDV 180 (343)
T ss_pred CCCceEEEeccccchhhhhhhhhhhchh-hhceEEEEE
Confidence 23489999999999999888775 355 788887763
No 55
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.53 E-value=1.4e-13 Score=94.91 Aligned_cols=109 Identities=14% Similarity=0.185 Sum_probs=74.7
Q ss_pred CCCcEEEEecCCCCCCCchHH--HHHHHHHHhhcCCeEEEEEcCCCCCCCCCCC---Cc----hHHHHHHHHHHHHHHHH
Q 031716 21 SSSPVVVFAHGAGAPSSSDWM--IKWKDMLGKALDAVEVVTFDYPYIAGGKRKA---PP----KAEKLVEFHTDVVKGAV 91 (154)
Q Consensus 21 ~~~~~il~lHG~~~~~~~~~~--~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~---~~----~~~~~~~~~~~~i~~~~ 91 (154)
++.|+||++||.+++.. .+. ..|..+..+ .++.|++||++|++...... .. .......++.+.++.+.
T Consensus 11 ~~~P~vv~lHG~~~~~~-~~~~~~~~~~~a~~--~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 87 (212)
T TIGR01840 11 GPRALVLALHGCGQTAS-AYVIDWGWKAAADR--YGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVK 87 (212)
T ss_pred CCCCEEEEeCCCCCCHH-HHhhhcChHHHHHh--CCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHH
Confidence 46799999999988753 332 124555544 69999999999874222100 00 01122344555566655
Q ss_pred HhC--CCCeEEEEEeCcchHHHHHHHhhcCccccEEEEeccCc
Q 031716 92 AKF--PGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPL 132 (154)
Q Consensus 92 ~~~--~~~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~ 132 (154)
++. +.++++|+|||+||.+++.++.++|+.+.+++.++.+.
T Consensus 88 ~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~ 130 (212)
T TIGR01840 88 ANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLP 130 (212)
T ss_pred HhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCc
Confidence 554 34589999999999999999999999999988777654
No 56
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.52 E-value=4e-13 Score=86.80 Aligned_cols=94 Identities=28% Similarity=0.384 Sum_probs=67.1
Q ss_pred EEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeEEEEEe
Q 031716 25 VVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGK 104 (154)
Q Consensus 25 ~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~G~ 104 (154)
+||++||++++. ..+. .+.+.+.+ .||.++.+|+|+++.. ......+++.+.+. .+..+.++++++||
T Consensus 1 ~vv~~HG~~~~~-~~~~-~~~~~l~~--~G~~v~~~~~~~~~~~------~~~~~~~~~~~~~~--~~~~~~~~i~l~G~ 68 (145)
T PF12695_consen 1 VVVLLHGWGGSR-RDYQ-PLAEALAE--QGYAVVAFDYPGHGDS------DGADAVERVLADIR--AGYPDPDRIILIGH 68 (145)
T ss_dssp EEEEECTTTTTT-HHHH-HHHHHHHH--TTEEEEEESCTTSTTS------HHSHHHHHHHHHHH--HHHCTCCEEEEEEE
T ss_pred CEEEECCCCCCH-HHHH-HHHHHHHH--CCCEEEEEecCCCCcc------chhHHHHHHHHHHH--hhcCCCCcEEEEEE
Confidence 589999999975 3332 34555544 7999999999997422 11122333333332 22236689999999
Q ss_pred CcchHHHHHHHhhcCccccEEEEeccC
Q 031716 105 SMGSRVSCMVACKEDIAASAVLCLGYP 131 (154)
Q Consensus 105 S~Gg~~a~~~a~~~~~~i~~~v~~~~p 131 (154)
|+||.++..++.++ .+++++|++++.
T Consensus 69 S~Gg~~a~~~~~~~-~~v~~~v~~~~~ 94 (145)
T PF12695_consen 69 SMGGAIAANLAARN-PRVKAVVLLSPY 94 (145)
T ss_dssp THHHHHHHHHHHHS-TTESEEEEESES
T ss_pred ccCcHHHHHHhhhc-cceeEEEEecCc
Confidence 99999999999988 789999999883
No 57
>PRK13604 luxD acyl transferase; Provisional
Probab=99.51 E-value=2.6e-13 Score=97.39 Aligned_cols=106 Identities=12% Similarity=0.035 Sum_probs=73.8
Q ss_pred CCCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCC-CCCCCCC-CchHHHHHHHHHHHHHHHHHhCCCCe
Q 031716 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYI-AGGKRKA-PPKAEKLVEFHTDVVKGAVAKFPGHP 98 (154)
Q Consensus 21 ~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~-g~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~ 98 (154)
.+.++||+.||++... . ....+++.+.+ +||.|+.+|++|+ |.+.... .........|+..+++++.++ ..++
T Consensus 35 ~~~~~vIi~HGf~~~~-~-~~~~~A~~La~--~G~~vLrfD~rg~~GeS~G~~~~~t~s~g~~Dl~aaid~lk~~-~~~~ 109 (307)
T PRK13604 35 KKNNTILIASGFARRM-D-HFAGLAEYLSS--NGFHVIRYDSLHHVGLSSGTIDEFTMSIGKNSLLTVVDWLNTR-GINN 109 (307)
T ss_pred CCCCEEEEeCCCCCCh-H-HHHHHHHHHHH--CCCEEEEecCCCCCCCCCCccccCcccccHHHHHHHHHHHHhc-CCCc
Confidence 3558999999999965 2 23345555555 8999999999886 5332211 111222357777778887765 4568
Q ss_pred EEEEEeCcchHHHHHHHhhcCccccEEEEeccCcc
Q 031716 99 LILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLK 133 (154)
Q Consensus 99 i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~~ 133 (154)
+.|+||||||.+++..|... .++++|+.+|...
T Consensus 110 I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~ 142 (307)
T PRK13604 110 LGLIAASLSARIAYEVINEI--DLSFLITAVGVVN 142 (307)
T ss_pred eEEEEECHHHHHHHHHhcCC--CCCEEEEcCCccc
Confidence 99999999999997777643 3888887766554
No 58
>PLN00021 chlorophyllase
Probab=99.51 E-value=4.2e-13 Score=97.45 Aligned_cols=106 Identities=22% Similarity=0.199 Sum_probs=70.3
Q ss_pred CCCCCcEEEEecCCCCCCCchHHHHHHHHHHhhc-CCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHh----
Q 031716 19 DTSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKAL-DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAK---- 93 (154)
Q Consensus 19 ~~~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~-~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~---- 93 (154)
..+..|+||++||++.+.. .|..+++.+. .||.|+++|++++. +.. ..... ....++.+++...++.
T Consensus 48 ~~g~~PvVv~lHG~~~~~~-----~y~~l~~~Las~G~~VvapD~~g~~-~~~-~~~~i-~d~~~~~~~l~~~l~~~l~~ 119 (313)
T PLN00021 48 EAGTYPVLLFLHGYLLYNS-----FYSQLLQHIASHGFIVVAPQLYTLA-GPD-GTDEI-KDAAAVINWLSSGLAAVLPE 119 (313)
T ss_pred CCCCCCEEEEECCCCCCcc-----cHHHHHHHHHhCCCEEEEecCCCcC-CCC-chhhH-HHHHHHHHHHHhhhhhhccc
Confidence 3456799999999998763 3555555554 68999999999863 221 11111 1223333333332221
Q ss_pred ---CCCCeEEEEEeCcchHHHHHHHhhcCc-----cccEEEEeccCc
Q 031716 94 ---FPGHPLILAGKSMGSRVSCMVACKEDI-----AASAVLCLGYPL 132 (154)
Q Consensus 94 ---~~~~~i~l~G~S~Gg~~a~~~a~~~~~-----~i~~~v~~~~p~ 132 (154)
.+.+++.++|||+||.+++.++..+++ ++.+++.+++..
T Consensus 120 ~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~ 166 (313)
T PLN00021 120 GVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVD 166 (313)
T ss_pred ccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeecccc
Confidence 234689999999999999999988764 578888887643
No 59
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.49 E-value=1.8e-13 Score=100.99 Aligned_cols=108 Identities=11% Similarity=0.015 Sum_probs=77.1
Q ss_pred CcEEEEecCCCCCCCchH----HHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCe
Q 031716 23 SPVVVFAHGAGAPSSSDW----MIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHP 98 (154)
Q Consensus 23 ~~~il~lHG~~~~~~~~~----~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 98 (154)
+++||++||..... ..+ ...+.+.+.+ .||+|+++|+++++.... ..+-.+...+++.++++.+++..+.++
T Consensus 62 ~~pvl~v~~~~~~~-~~~d~~~~~~~~~~L~~--~G~~V~~~D~~g~g~s~~-~~~~~d~~~~~~~~~v~~l~~~~~~~~ 137 (350)
T TIGR01836 62 KTPLLIVYALVNRP-YMLDLQEDRSLVRGLLE--RGQDVYLIDWGYPDRADR-YLTLDDYINGYIDKCVDYICRTSKLDQ 137 (350)
T ss_pred CCcEEEeccccccc-eeccCCCCchHHHHHHH--CCCeEEEEeCCCCCHHHh-cCCHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 45699999964322 111 0134455544 799999999998753221 112122233456677788888778889
Q ss_pred EEEEEeCcchHHHHHHHhhcCccccEEEEeccCccc
Q 031716 99 LILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKV 134 (154)
Q Consensus 99 i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~~~ 134 (154)
++++||||||.+++.++..+|+++++++++++|+..
T Consensus 138 i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~ 173 (350)
T TIGR01836 138 ISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDF 173 (350)
T ss_pred ccEEEECHHHHHHHHHHHhCchheeeEEEecccccc
Confidence 999999999999999999999999999999998864
No 60
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.49 E-value=1e-12 Score=84.86 Aligned_cols=112 Identities=35% Similarity=0.566 Sum_probs=87.8
Q ss_pred CCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCC---CCCCCCCchHHHHHHHHHHHHHHHHHhCCCCe
Q 031716 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIA---GGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHP 98 (154)
Q Consensus 22 ~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 98 (154)
..-+||+.||.|++.++..++..+..+.. .|+.|..+++++.. .+...+++.....-.++...+.++.+.+...+
T Consensus 13 ~~~tilLaHGAGasmdSt~m~~~a~~la~--~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~~gp 90 (213)
T COG3571 13 APVTILLAHGAGASMDSTSMTAVAAALAR--RGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLAEGP 90 (213)
T ss_pred CCEEEEEecCCCCCCCCHHHHHHHHHHHh--CceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcccCCc
Confidence 34578889999999998887767777666 89999999998642 22232344444455678888888888888789
Q ss_pred EEEEEeCcchHHHHHHHhhcCccccEEEEeccCcccc
Q 031716 99 LILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKVC 135 (154)
Q Consensus 99 i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~~~~ 135 (154)
+++.|+||||.++.+++......|++++|++.|+...
T Consensus 91 Li~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhpp 127 (213)
T COG3571 91 LIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHPP 127 (213)
T ss_pred eeeccccccchHHHHHHHhhcCCcceEEEecCccCCC
Confidence 9999999999999999987555699999999998654
No 61
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.45 E-value=4.4e-12 Score=90.77 Aligned_cols=110 Identities=17% Similarity=0.220 Sum_probs=71.0
Q ss_pred CCCCcEEEEecCCCCCCCchHHH--HHHHHHHhhcCCeEEEEEcCCCCCCCCCC-------------C------Cch-HH
Q 031716 20 TSSSPVVVFAHGAGAPSSSDWMI--KWKDMLGKALDAVEVVTFDYPYIAGGKRK-------------A------PPK-AE 77 (154)
Q Consensus 20 ~~~~~~il~lHG~~~~~~~~~~~--~~~~~~~~l~~~~~v~~~d~~g~g~~~~~-------------~------~~~-~~ 77 (154)
.++.|+|+++||.+++. ..|.. .+..++.. .++.|+.||.++.|.+.+. . +.. ..
T Consensus 39 ~~~~P~vvllHG~~~~~-~~~~~~~~~~~la~~--~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~ 115 (275)
T TIGR02821 39 AGPVPVLWYLSGLTCTH-ENFMIKAGAQRFAAE--HGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHY 115 (275)
T ss_pred CCCCCEEEEccCCCCCc-cHHHhhhHHHHHHhh--cCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccc
Confidence 34579999999999876 33321 12233333 5899999998433222110 0 000 00
Q ss_pred HHHHHHHHHHHHHHHh---CCCCeEEEEEeCcchHHHHHHHhhcCccccEEEEeccCc
Q 031716 78 KLVEFHTDVVKGAVAK---FPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPL 132 (154)
Q Consensus 78 ~~~~~~~~~i~~~~~~---~~~~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~ 132 (154)
...+.+.+.+..++++ .+.+++.++||||||++++.++.++|+.+++++++++..
T Consensus 116 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~ 173 (275)
T TIGR02821 116 RMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIV 173 (275)
T ss_pred hHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCcc
Confidence 1123334455555544 355689999999999999999999999999999887654
No 62
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.43 E-value=4.6e-12 Score=88.10 Aligned_cols=112 Identities=19% Similarity=0.240 Sum_probs=70.4
Q ss_pred CCcEEEEecCCCCCCCchHHHHHHHHHH-----hhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhC--
Q 031716 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLG-----KALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKF-- 94 (154)
Q Consensus 22 ~~~~il~lHG~~~~~~~~~~~~~~~~~~-----~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~-- 94 (154)
.+.+|||+||.+++.. .+........+ .....++++.+|+....... .........+-+.+.++.+.+.+
T Consensus 3 ~g~pVlFIhG~~Gs~~-q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~--~g~~l~~q~~~~~~~i~~i~~~~~~ 79 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYK-QVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAF--HGRTLQRQAEFLAEAIKYILELYKS 79 (225)
T ss_pred CCCEEEEECcCCCCHh-HHHHHHHHHhhhhhhccCccceeEEEeccCcccccc--ccccHHHHHHHHHHHHHHHHHhhhh
Confidence 4567999999888763 22211111111 11135889999987632111 11112233344455555555544
Q ss_pred ---CCCeEEEEEeCcchHHHHHHHhhc---CccccEEEEeccCccccc
Q 031716 95 ---PGHPLILAGKSMGSRVSCMVACKE---DIAASAVLCLGYPLKVCY 136 (154)
Q Consensus 95 ---~~~~i~l~G~S~Gg~~a~~~a~~~---~~~i~~~v~~~~p~~~~~ 136 (154)
+.++++|+||||||.++..++... ++.++.+|.+++|..+..
T Consensus 80 ~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g~~ 127 (225)
T PF07819_consen 80 NRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRGSP 127 (225)
T ss_pred ccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCCcc
Confidence 667999999999999999888753 357999999999987654
No 63
>PLN02442 S-formylglutathione hydrolase
Probab=99.43 E-value=5e-12 Score=90.85 Aligned_cols=111 Identities=11% Similarity=0.083 Sum_probs=75.7
Q ss_pred CCCCcEEEEecCCCCCCCchHHH--HHHHHHHhhcCCeEEEEEcCCCCCCC---C----------CCC-----C-----c
Q 031716 20 TSSSPVVVFAHGAGAPSSSDWMI--KWKDMLGKALDAVEVVTFDYPYIAGG---K----------RKA-----P-----P 74 (154)
Q Consensus 20 ~~~~~~il~lHG~~~~~~~~~~~--~~~~~~~~l~~~~~v~~~d~~g~g~~---~----------~~~-----~-----~ 74 (154)
..+.|+|+++||++++. ..|.. ...+.+.. .++.|+.||..++|.+ . +.. . .
T Consensus 44 ~~~~Pvv~~lHG~~~~~-~~~~~~~~~~~~~~~--~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (283)
T PLN02442 44 SGKVPVLYWLSGLTCTD-ENFIQKSGAQRAAAA--RGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWR 120 (283)
T ss_pred CCCCCEEEEecCCCcCh-HHHHHhhhHHHHHhh--cCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccc
Confidence 34679999999988765 33321 12233332 6999999998754311 0 000 0 1
Q ss_pred hHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCcchHHHHHHHhhcCccccEEEEeccCcc
Q 031716 75 KAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLK 133 (154)
Q Consensus 75 ~~~~~~~~~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~~ 133 (154)
......+++.+.+....+..+.++++|+||||||+.++.++.++|+++++++++++...
T Consensus 121 ~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~ 179 (283)
T PLN02442 121 MYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIAN 179 (283)
T ss_pred hhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccC
Confidence 11224556666666666656778899999999999999999999999999998887653
No 64
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.42 E-value=7.5e-13 Score=91.28 Aligned_cols=77 Identities=14% Similarity=0.130 Sum_probs=66.2
Q ss_pred eEEEEEcCCCCCCCCC-CCCchHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCcchHHHHHHHhhcCccccEEEEeccC
Q 031716 55 VEVVTFDYPYIAGGKR-KAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYP 131 (154)
Q Consensus 55 ~~v~~~d~~g~g~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p 131 (154)
|+|+++|+||+|.++. ..........+++++.+..++++++.+++.++||||||.+++.++.++|++++++|+++++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~ 78 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPP 78 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESES
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeee
Confidence 7899999999865442 0134445678899999999999999989999999999999999999999999999999886
No 65
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.40 E-value=6e-12 Score=87.45 Aligned_cols=102 Identities=21% Similarity=0.304 Sum_probs=70.8
Q ss_pred cEEEEecCCCCCCCchHHHHHHHHHHhhcCC-eEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeEEEE
Q 031716 24 PVVVFAHGAGAPSSSDWMIKWKDMLGKALDA-VEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILA 102 (154)
Q Consensus 24 ~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~ 102 (154)
++|+++|+.+++.. .|..+.+.+... +.|+.++++|.+ ............++.+++.| .+..+..++.|+
T Consensus 1 ~~lf~~p~~gG~~~-----~y~~la~~l~~~~~~v~~i~~~~~~-~~~~~~~si~~la~~y~~~I---~~~~~~gp~~L~ 71 (229)
T PF00975_consen 1 RPLFCFPPAGGSAS-----SYRPLARALPDDVIGVYGIEYPGRG-DDEPPPDSIEELASRYAEAI---RARQPEGPYVLA 71 (229)
T ss_dssp -EEEEESSTTCSGG-----GGHHHHHHHTTTEEEEEEECSTTSC-TTSHEESSHHHHHHHHHHHH---HHHTSSSSEEEE
T ss_pred CeEEEEcCCccCHH-----HHHHHHHhCCCCeEEEEEEecCCCC-CCCCCCCCHHHHHHHHHHHh---hhhCCCCCeeeh
Confidence 36899999999764 467777777665 999999999974 12212233333344444333 333444599999
Q ss_pred EeCcchHHHHHHHhh---cCccccEEEEeccCccc
Q 031716 103 GKSMGSRVSCMVACK---EDIAASAVLCLGYPLKV 134 (154)
Q Consensus 103 G~S~Gg~~a~~~a~~---~~~~i~~~v~~~~p~~~ 134 (154)
|||+||.+|+++|.+ ....+..+++++++.+.
T Consensus 72 G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~p~ 106 (229)
T PF00975_consen 72 GWSFGGILAFEMARQLEEAGEEVSRLILIDSPPPS 106 (229)
T ss_dssp EETHHHHHHHHHHHHHHHTT-SESEEEEESCSSTT
T ss_pred ccCccHHHHHHHHHHHHHhhhccCceEEecCCCCC
Confidence 999999999999987 34568899999976553
No 66
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.39 E-value=9.2e-12 Score=89.14 Aligned_cols=113 Identities=22% Similarity=0.301 Sum_probs=81.2
Q ss_pred CCCCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCch-HHHHHHHHHHHHHHHHHhCCCCe
Q 031716 20 TSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPK-AEKLVEFHTDVVKGAVAKFPGHP 98 (154)
Q Consensus 20 ~~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~ 98 (154)
....|.+|++||..|+..+++...+.+.+.+ +||.++++++||++......+.- .....+|.+..++.+.......+
T Consensus 72 ~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~--rg~~~Vv~~~Rgcs~~~n~~p~~yh~G~t~D~~~~l~~l~~~~~~r~ 149 (345)
T COG0429 72 AAKKPLVVLFHGLEGSSNSPYARGLMRALSR--RGWLVVVFHFRGCSGEANTSPRLYHSGETEDIRFFLDWLKARFPPRP 149 (345)
T ss_pred ccCCceEEEEeccCCCCcCHHHHHHHHHHHh--cCCeEEEEecccccCCcccCcceecccchhHHHHHHHHHHHhCCCCc
Confidence 3456899999999998888776666666666 89999999999985433322221 12244788888888887778889
Q ss_pred EEEEEeCcch-HHHHHHHhhcCc-cccEEEEeccCccc
Q 031716 99 LILAGKSMGS-RVSCMVACKEDI-AASAVLCLGYPLKV 134 (154)
Q Consensus 99 i~l~G~S~Gg-~~a~~~a~~~~~-~i~~~v~~~~p~~~ 134 (154)
+..+|.|+|| +++..++++-.+ .+.+.+.++.|++.
T Consensus 150 ~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl 187 (345)
T COG0429 150 LYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDL 187 (345)
T ss_pred eEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHH
Confidence 9999999999 555555554222 46777777777764
No 67
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.38 E-value=8.3e-12 Score=86.39 Aligned_cols=104 Identities=18% Similarity=0.194 Sum_probs=74.8
Q ss_pred CcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeEEEE
Q 031716 23 SPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILA 102 (154)
Q Consensus 23 ~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~ 102 (154)
.|+++++||++++.. .|.. ...........|+++.+|+||+|... .. ......+++.+..++++++..++.++
T Consensus 21 ~~~i~~~hg~~~~~~-~~~~-~~~~~~~~~~~~~~~~~d~~g~g~s~--~~---~~~~~~~~~~~~~~~~~~~~~~~~l~ 93 (282)
T COG0596 21 GPPLVLLHGFPGSSS-VWRP-VFKVLPALAARYRVIAPDLRGHGRSD--PA---GYSLSAYADDLAALLDALGLEKVVLV 93 (282)
T ss_pred CCeEEEeCCCCCchh-hhHH-HHHHhhccccceEEEEecccCCCCCC--cc---cccHHHHHHHHHHHHHHhCCCceEEE
Confidence 558999999998774 2221 11122221112999999999986443 11 11223337777778888887789999
Q ss_pred EeCcchHHHHHHHhhcCccccEEEEeccCcc
Q 031716 103 GKSMGSRVSCMVACKEDIAASAVLCLGYPLK 133 (154)
Q Consensus 103 G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~~ 133 (154)
|||+||.++..++.++|+.++++++++++..
T Consensus 94 G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~ 124 (282)
T COG0596 94 GHSMGGAVALALALRHPDRVRGLVLIGPAPP 124 (282)
T ss_pred EecccHHHHHHHHHhcchhhheeeEecCCCC
Confidence 9999999999999999999999999987654
No 68
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.37 E-value=1.9e-11 Score=90.20 Aligned_cols=112 Identities=21% Similarity=0.298 Sum_probs=85.1
Q ss_pred CCCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCch-HHHHHHHHHHHHHHHHHhCCCCeE
Q 031716 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPK-AEKLVEFHTDVVKGAVAKFPGHPL 99 (154)
Q Consensus 21 ~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~i 99 (154)
...|.+|++||..+++...+...+...+.+ +||++++++.||+++..-..+.- .....+|+.++++.+..+.+..++
T Consensus 123 ~~~P~vvilpGltg~S~~~YVr~lv~~a~~--~G~r~VVfN~RG~~g~~LtTpr~f~ag~t~Dl~~~v~~i~~~~P~a~l 200 (409)
T KOG1838|consen 123 GTDPIVVILPGLTGGSHESYVRHLVHEAQR--KGYRVVVFNHRGLGGSKLTTPRLFTAGWTEDLREVVNHIKKRYPQAPL 200 (409)
T ss_pred CCCcEEEEecCCCCCChhHHHHHHHHHHHh--CCcEEEEECCCCCCCCccCCCceeecCCHHHHHHHHHHHHHhCCCCce
Confidence 466999999998888776665555555555 89999999999974322211111 122567889999999999999999
Q ss_pred EEEEeCcchHHHHHHHhhcCc--cccEEEEeccCccc
Q 031716 100 ILAGKSMGSRVSCMVACKEDI--AASAVLCLGYPLKV 134 (154)
Q Consensus 100 ~l~G~S~Gg~~a~~~a~~~~~--~i~~~v~~~~p~~~ 134 (154)
..+|+||||.+...+..+..+ .+.+.+.++.|++.
T Consensus 201 ~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~ 237 (409)
T KOG1838|consen 201 FAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDL 237 (409)
T ss_pred EEEEecchHHHHHHHhhhccCCCCceeEEEEeccchh
Confidence 999999999999999987443 46777778888875
No 69
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.35 E-value=1.1e-11 Score=88.60 Aligned_cols=102 Identities=17% Similarity=0.213 Sum_probs=75.6
Q ss_pred CCCCcEEEEecCCCCCCCchHHHHHHHHHHhhc--CCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhC---
Q 031716 20 TSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKAL--DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKF--- 94 (154)
Q Consensus 20 ~~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~--~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~--- 94 (154)
....|+++++||..++.. .|..+...|. -+..++.+|.|-||.+....... ..++++++..+++..
T Consensus 49 ~~~~Pp~i~lHGl~GS~~-----Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h~----~~~ma~dv~~Fi~~v~~~ 119 (315)
T KOG2382|consen 49 LERAPPAIILHGLLGSKE-----NWRSVAKNLSRKLGRDVYAVDVRNHGSSPKITVHN----YEAMAEDVKLFIDGVGGS 119 (315)
T ss_pred cCCCCceEEecccccCCC-----CHHHHHHHhcccccCceEEEecccCCCCccccccC----HHHHHHHHHHHHHHcccc
Confidence 457899999999999884 5777777665 47899999999986544433333 344555555555543
Q ss_pred -CCCeEEEEEeCcch-HHHHHHHhhcCccccEEEEecc
Q 031716 95 -PGHPLILAGKSMGS-RVSCMVACKEDIAASAVLCLGY 130 (154)
Q Consensus 95 -~~~~i~l~G~S~Gg-~~a~~~a~~~~~~i~~~v~~~~ 130 (154)
...++.|+|||||| .+++..+..+|+.+..+|+.+.
T Consensus 120 ~~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~ 157 (315)
T KOG2382|consen 120 TRLDPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDI 157 (315)
T ss_pred cccCCceecccCcchHHHHHHHHHhcCcccceeEEEec
Confidence 46699999999999 7777777889999999888753
No 70
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.34 E-value=3.2e-11 Score=80.16 Aligned_cols=110 Identities=15% Similarity=0.221 Sum_probs=84.1
Q ss_pred CCCCcEEEEecC---CCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCC
Q 031716 20 TSSSPVVVFAHG---AGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPG 96 (154)
Q Consensus 20 ~~~~~~il~lHG---~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 96 (154)
....|+.|.+|. ++++......+...+.+.+ .|+.++.||+||.|.+.... +......+|...+++++..+.+.
T Consensus 25 ~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~--~G~atlRfNfRgVG~S~G~f-D~GiGE~~Da~aaldW~~~~hp~ 101 (210)
T COG2945 25 TPAAPIALICHPHPLFGGTMNNKVVQTLARALVK--RGFATLRFNFRGVGRSQGEF-DNGIGELEDAAAALDWLQARHPD 101 (210)
T ss_pred CCCCceEEecCCCccccCccCCHHHHHHHHHHHh--CCceEEeecccccccccCcc-cCCcchHHHHHHHHHHHHhhCCC
Confidence 467889999998 6677766666666666666 79999999999986544433 33344578888899999888776
Q ss_pred CeE-EEEEeCcchHHHHHHHhhcCccccEEEEeccCcc
Q 031716 97 HPL-ILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLK 133 (154)
Q Consensus 97 ~~i-~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~~ 133 (154)
.+. .|.|+|+|+++++.++.+.|+ +...+.+.++..
T Consensus 102 s~~~~l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~~ 138 (210)
T COG2945 102 SASCWLAGFSFGAYIAMQLAMRRPE-ILVFISILPPIN 138 (210)
T ss_pred chhhhhcccchHHHHHHHHHHhccc-ccceeeccCCCC
Confidence 665 789999999999999999766 555666666666
No 71
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.33 E-value=1.1e-11 Score=96.57 Aligned_cols=112 Identities=12% Similarity=-0.046 Sum_probs=77.9
Q ss_pred CCCCcEEEEecCCCCCCCc--hHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHh-CCC
Q 031716 20 TSSSPVVVFAHGAGAPSSS--DWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAK-FPG 96 (154)
Q Consensus 20 ~~~~~~il~lHG~~~~~~~--~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~ 96 (154)
.++.|+||++||++.+... .+.......+.. +||.|+.+|+||+|.+............+|..+.++++.++ ...
T Consensus 19 ~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~--~Gy~vv~~D~RG~g~S~g~~~~~~~~~~~D~~~~i~~l~~q~~~~ 96 (550)
T TIGR00976 19 GGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVA--QGYAVVIQDTRGRGASEGEFDLLGSDEAADGYDLVDWIAKQPWCD 96 (550)
T ss_pred CCCCCEEEEecCCCCchhhccccccccHHHHHh--CCcEEEEEeccccccCCCceEecCcccchHHHHHHHHHHhCCCCC
Confidence 3467999999999876420 111112233333 79999999999987443321111134567777777777665 234
Q ss_pred CeEEEEEeCcchHHHHHHHhhcCccccEEEEeccCcc
Q 031716 97 HPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLK 133 (154)
Q Consensus 97 ~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~~ 133 (154)
.++.++|+|+||.+++.++..+|..+++++...+...
T Consensus 97 ~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d 133 (550)
T TIGR00976 97 GNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWD 133 (550)
T ss_pred CcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccc
Confidence 5999999999999999999998889999998766544
No 72
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.32 E-value=2.8e-11 Score=83.93 Aligned_cols=103 Identities=18% Similarity=0.259 Sum_probs=78.1
Q ss_pred CCCcEEEEecCCCCCCCchHHHHHHHHHHhhc--CCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhC-CCC
Q 031716 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKAL--DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKF-PGH 97 (154)
Q Consensus 21 ~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~--~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~ 97 (154)
...+++++.||...+.+ ....++..+. -+++++.+||+|+|.+...+ ......+|+.++.+++.+.. +.+
T Consensus 58 ~~~~~lly~hGNa~Dlg-----q~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~p--sE~n~y~Di~avye~Lr~~~g~~~ 130 (258)
T KOG1552|consen 58 AAHPTLLYSHGNAADLG-----QMVELFKELSIFLNCNVVSYDYSGYGRSSGKP--SERNLYADIKAVYEWLRNRYGSPE 130 (258)
T ss_pred ccceEEEEcCCcccchH-----HHHHHHHHHhhcccceEEEEecccccccCCCc--ccccchhhHHHHHHHHHhhcCCCc
Confidence 34689999999977664 2344444443 48999999999986444322 22356678888888888887 578
Q ss_pred eEEEEEeCcchHHHHHHHhhcCccccEEEEeccCc
Q 031716 98 PLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPL 132 (154)
Q Consensus 98 ~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~ 132 (154)
+|+|+|+|+|+..++.+|.+.| +.++|+.+|-.
T Consensus 131 ~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~ 163 (258)
T KOG1552|consen 131 RIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFT 163 (258)
T ss_pred eEEEEEecCCchhhhhHhhcCC--cceEEEeccch
Confidence 9999999999999999999987 89999876543
No 73
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.32 E-value=8.2e-12 Score=93.26 Aligned_cols=111 Identities=17% Similarity=0.074 Sum_probs=79.7
Q ss_pred CCCcEEEEecCCCCCCCchH--------HHHHHHHHHh---hc-CCeEEEEEcCCCCCCCCCC----------CC-----
Q 031716 21 SSSPVVVFAHGAGAPSSSDW--------MIKWKDMLGK---AL-DAVEVVTFDYPYIAGGKRK----------AP----- 73 (154)
Q Consensus 21 ~~~~~il~lHG~~~~~~~~~--------~~~~~~~~~~---l~-~~~~v~~~d~~g~g~~~~~----------~~----- 73 (154)
...++||++|+..++..... ...|..++-. +. ..|.|+++|..|-+.++++ .+
T Consensus 54 ~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~ 133 (389)
T PRK06765 54 AKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVITTGPASINPKTGKP 133 (389)
T ss_pred CCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCc
Confidence 34689999999988652110 0114444432 21 4799999999974321100 01
Q ss_pred ---chHHHHHHHHHHHHHHHHHhCCCCeEE-EEEeCcchHHHHHHHhhcCccccEEEEeccC
Q 031716 74 ---PKAEKLVEFHTDVVKGAVAKFPGHPLI-LAGKSMGSRVSCMVACKEDIAASAVLCLGYP 131 (154)
Q Consensus 74 ---~~~~~~~~~~~~~i~~~~~~~~~~~i~-l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p 131 (154)
+-....++++++.+..++++++.+++. ++||||||+++++++.++|++++++|++++.
T Consensus 134 ~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~ 195 (389)
T PRK06765 134 YGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGN 195 (389)
T ss_pred cCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEecC
Confidence 111257889999999999999999986 9999999999999999999999999998654
No 74
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.31 E-value=7.2e-11 Score=83.05 Aligned_cols=112 Identities=17% Similarity=0.158 Sum_probs=82.7
Q ss_pred CCCCCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCC-C
Q 031716 19 DTSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPG-H 97 (154)
Q Consensus 19 ~~~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~ 97 (154)
.+....+||-+||..|+. .|+. ..+..+.+ .+.+++.++|||+|.... ++...+.-.+-...+..+++.++. +
T Consensus 31 ~gs~~gTVv~~hGsPGSH-~DFk-Yi~~~l~~--~~iR~I~iN~PGf~~t~~--~~~~~~~n~er~~~~~~ll~~l~i~~ 104 (297)
T PF06342_consen 31 SGSPLGTVVAFHGSPGSH-NDFK-YIRPPLDE--AGIRFIGINYPGFGFTPG--YPDQQYTNEERQNFVNALLDELGIKG 104 (297)
T ss_pred CCCCceeEEEecCCCCCc-cchh-hhhhHHHH--cCeEEEEeCCCCCCCCCC--CcccccChHHHHHHHHHHHHHcCCCC
Confidence 344556899999999987 4443 24455555 799999999999864333 233344556777788888888764 4
Q ss_pred eEEEEEeCcchHHHHHHHhhcCccccEEEEeccCccccchh
Q 031716 98 PLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKVCYYL 138 (154)
Q Consensus 98 ~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~~~~~~~ 138 (154)
+++++|||.|+-.|+.++..+| ..++++++|+-...+..
T Consensus 105 ~~i~~gHSrGcenal~la~~~~--~~g~~lin~~G~r~Hkg 143 (297)
T PF06342_consen 105 KLIFLGHSRGCENALQLAVTHP--LHGLVLINPPGLRPHKG 143 (297)
T ss_pred ceEEEEeccchHHHHHHHhcCc--cceEEEecCCccccccC
Confidence 7889999999999999999885 67999998876554433
No 75
>PRK11460 putative hydrolase; Provisional
Probab=99.31 E-value=8.4e-11 Score=82.25 Aligned_cols=111 Identities=14% Similarity=0.118 Sum_probs=65.4
Q ss_pred CCCCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCC---CCCCCCC------C-c---hHHHHHHHHHHH
Q 031716 20 TSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYI---AGGKRKA------P-P---KAEKLVEFHTDV 86 (154)
Q Consensus 20 ~~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~---g~~~~~~------~-~---~~~~~~~~~~~~ 86 (154)
....|.||++||.|++. .++.. +.+.+......+.++.++-+.. +.+.... . . ......+.+.+.
T Consensus 13 ~~~~~~vIlLHG~G~~~-~~~~~-l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~ 90 (232)
T PRK11460 13 KPAQQLLLLFHGVGDNP-VAMGE-IGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIET 90 (232)
T ss_pred CCCCcEEEEEeCCCCCh-HHHHH-HHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHH
Confidence 34578999999999987 33332 3333332112345555553311 1111100 0 1 112233344455
Q ss_pred HHHHHHhC--CCCeEEEEEeCcchHHHHHHHhhcCccccEEEEeccCc
Q 031716 87 VKGAVAKF--PGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPL 132 (154)
Q Consensus 87 i~~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~ 132 (154)
++.+.++. +.++++++|||+||.+++.++..+|+.+.+++++++.+
T Consensus 91 i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~ 138 (232)
T PRK11460 91 VRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRY 138 (232)
T ss_pred HHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecccc
Confidence 55555553 34589999999999999999988888888888776544
No 76
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.29 E-value=6.9e-11 Score=91.08 Aligned_cols=111 Identities=7% Similarity=-0.046 Sum_probs=78.3
Q ss_pred CCcEEEEecCCCCCCCchHH----HHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCC
Q 031716 22 SSPVVVFAHGAGAPSSSDWM----IKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGH 97 (154)
Q Consensus 22 ~~~~il~lHG~~~~~~~~~~----~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 97 (154)
.+++||++||+.... ..+. ..+.+.+.+ +||+|+++|++++|...... ...++..+.+.++++.+++..+.+
T Consensus 187 ~~~PlLiVp~~i~k~-yilDL~p~~Slv~~L~~--qGf~V~~iDwrgpg~s~~~~-~~ddY~~~~i~~al~~v~~~~g~~ 262 (532)
T TIGR01838 187 HKTPLLIVPPWINKY-YILDLRPQNSLVRWLVE--QGHTVFVISWRNPDASQADK-TFDDYIRDGVIAALEVVEAITGEK 262 (532)
T ss_pred CCCcEEEECcccccc-eeeecccchHHHHHHHH--CCcEEEEEECCCCCcccccC-ChhhhHHHHHHHHHHHHHHhcCCC
Confidence 457899999976433 2220 134444444 79999999999986443321 222445566888888888888888
Q ss_pred eEEEEEeCcchHHHH----HHHhhc-CccccEEEEeccCccccc
Q 031716 98 PLILAGKSMGSRVSC----MVACKE-DIAASAVLCLGYPLKVCY 136 (154)
Q Consensus 98 ~i~l~G~S~Gg~~a~----~~a~~~-~~~i~~~v~~~~p~~~~~ 136 (154)
+++++|||+||.++. .++... +++++++++++++++...
T Consensus 263 kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~ 306 (532)
T TIGR01838 263 QVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSD 306 (532)
T ss_pred CeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCC
Confidence 999999999999852 234444 778999999998887554
No 77
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.28 E-value=7.3e-11 Score=81.65 Aligned_cols=114 Identities=19% Similarity=0.223 Sum_probs=63.5
Q ss_pred CCCCCCcEEEEecCCCCCCCchHHHHHHHHHH--hhcCCeEEEEEcCCCC----CCCC-----------CCCC----chH
Q 031716 18 DDTSSSPVVVFAHGAGAPSSSDWMIKWKDMLG--KALDAVEVVTFDYPYI----AGGK-----------RKAP----PKA 76 (154)
Q Consensus 18 ~~~~~~~~il~lHG~~~~~~~~~~~~~~~~~~--~l~~~~~v~~~d~~g~----g~~~-----------~~~~----~~~ 76 (154)
..+...++||++||.|++. . .+..... ....+..++.++-|.. ..+. .... ...
T Consensus 9 ~~~~~~~lvi~LHG~G~~~-~----~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i 83 (216)
T PF02230_consen 9 PKGKAKPLVILLHGYGDSE-D----LFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGI 83 (216)
T ss_dssp -SST-SEEEEEE--TTS-H-H----HHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHH
T ss_pred CCCCCceEEEEECCCCCCc-c----hhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHH
Confidence 3456789999999999876 2 2333333 1226788887764310 0111 0001 112
Q ss_pred HHHHHHHHHHHHHHHHh-CCCCeEEEEEeCcchHHHHHHHhhcCccccEEEEeccCccccc
Q 031716 77 EKLVEFHTDVVKGAVAK-FPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKVCY 136 (154)
Q Consensus 77 ~~~~~~~~~~i~~~~~~-~~~~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~~~~~ 136 (154)
....+.+.+.++..++. .+.++|+|+|+|+||++|+.++.++|+.++++++++..++...
T Consensus 84 ~~s~~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~ 144 (216)
T PF02230_consen 84 EESAERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPES 144 (216)
T ss_dssp HHHHHHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGC
T ss_pred HHHHHHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccccc
Confidence 22333333344433332 3556999999999999999999999999999999988766543
No 78
>COG0400 Predicted esterase [General function prediction only]
Probab=99.26 E-value=7.4e-11 Score=80.68 Aligned_cols=111 Identities=14% Similarity=0.163 Sum_probs=77.4
Q ss_pred CCCCCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCC-----------CCCCCCCCCCchHHHHHHHHHHHH
Q 031716 19 DTSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYP-----------YIAGGKRKAPPKAEKLVEFHTDVV 87 (154)
Q Consensus 19 ~~~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~-----------g~g~~~~~~~~~~~~~~~~~~~~i 87 (154)
+....|+||++||.|++. .+ +....+.+.+++.++.+.-+ +.+.+.- .........+.+++.+
T Consensus 14 ~~p~~~~iilLHG~Ggde-~~----~~~~~~~~~P~~~~is~rG~v~~~g~~~~f~~~~~~~~-d~edl~~~~~~~~~~l 87 (207)
T COG0400 14 GDPAAPLLILLHGLGGDE-LD----LVPLPELILPNATLVSPRGPVAENGGPRFFRRYDEGSF-DQEDLDLETEKLAEFL 87 (207)
T ss_pred CCCCCcEEEEEecCCCCh-hh----hhhhhhhcCCCCeEEcCCCCccccCcccceeecCCCcc-chhhHHHHHHHHHHHH
Confidence 345667899999999876 33 33445444467888777522 1111111 1223444556777777
Q ss_pred HHHHHhCCC--CeEEEEEeCcchHHHHHHHhhcCccccEEEEeccCcccc
Q 031716 88 KGAVAKFPG--HPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKVC 135 (154)
Q Consensus 88 ~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~~~~ 135 (154)
+...++.+. ++++++|+|.||++++.+..++|+.+++++++++..+..
T Consensus 88 ~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~ 137 (207)
T COG0400 88 EELAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLE 137 (207)
T ss_pred HHHHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCC
Confidence 777777654 799999999999999999999999999999988755543
No 79
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.26 E-value=4.3e-11 Score=82.22 Aligned_cols=99 Identities=16% Similarity=0.168 Sum_probs=68.6
Q ss_pred EEEecCCCCCCCchH--HHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHh-----CCCCe
Q 031716 26 VVFAHGAGAPSSSDW--MIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAK-----FPGHP 98 (154)
Q Consensus 26 il~lHG~~~~~~~~~--~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~-----~~~~~ 98 (154)
||++||++...+... ......+.+. .|+.|+.+|||-. ........++|..+.+++++++ .+.++
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~--~g~~v~~~~Yrl~------p~~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~ 72 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAE--RGFVVVSIDYRLA------PEAPFPAALEDVKAAYRWLLKNADKLGIDPER 72 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHH--HTSEEEEEE---T------TTSSTTHHHHHHHHHHHHHHHTHHHHTEEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhh--ccEEEEEeecccc------ccccccccccccccceeeeccccccccccccc
Confidence 789999888766322 1123334433 5999999999963 1223455678888888888887 56779
Q ss_pred EEEEEeCcchHHHHHHHhhcCc----cccEEEEeccCc
Q 031716 99 LILAGKSMGSRVSCMVACKEDI----AASAVLCLGYPL 132 (154)
Q Consensus 99 i~l~G~S~Gg~~a~~~a~~~~~----~i~~~v~~~~p~ 132 (154)
|+|+|+|.||.+++.++....+ .++++++++|..
T Consensus 73 i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~ 110 (211)
T PF07859_consen 73 IVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWT 110 (211)
T ss_dssp EEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHS
T ss_pred eEEeecccccchhhhhhhhhhhhcccchhhhhcccccc
Confidence 9999999999999999976322 489999998754
No 80
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.26 E-value=1.3e-11 Score=83.58 Aligned_cols=106 Identities=17% Similarity=0.186 Sum_probs=78.0
Q ss_pred CCCCCCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHh--CC
Q 031716 18 DDTSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAK--FP 95 (154)
Q Consensus 18 ~~~~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~ 95 (154)
..+.++|+++++|+..|+.+.... ...-+..+ -+.+|+.++|||+|.+.....+ ....-|-..+++++..+ ++
T Consensus 73 ~~E~S~pTlLyfh~NAGNmGhr~~-i~~~fy~~--l~mnv~ivsYRGYG~S~GspsE--~GL~lDs~avldyl~t~~~~d 147 (300)
T KOG4391|consen 73 LSESSRPTLLYFHANAGNMGHRLP-IARVFYVN--LKMNVLIVSYRGYGKSEGSPSE--EGLKLDSEAVLDYLMTRPDLD 147 (300)
T ss_pred cccCCCceEEEEccCCCcccchhh-HHHHHHHH--cCceEEEEEeeccccCCCCccc--cceeccHHHHHHHHhcCccCC
Confidence 445689999999999999974332 22233333 4899999999998755443222 33334555567777765 45
Q ss_pred CCeEEEEEeCcchHHHHHHHhhcCccccEEEEe
Q 031716 96 GHPLILAGKSMGSRVSCMVACKEDIAASAVLCL 128 (154)
Q Consensus 96 ~~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~ 128 (154)
..++++.|.|.||.+|+.+|.++.+++.++++-
T Consensus 148 ktkivlfGrSlGGAvai~lask~~~ri~~~ivE 180 (300)
T KOG4391|consen 148 KTKIVLFGRSLGGAVAIHLASKNSDRISAIIVE 180 (300)
T ss_pred cceEEEEecccCCeeEEEeeccchhheeeeeee
Confidence 669999999999999999999999999998854
No 81
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.26 E-value=2.3e-10 Score=81.57 Aligned_cols=111 Identities=17% Similarity=0.206 Sum_probs=75.5
Q ss_pred CcEEEEecCCCCCCCchHHHHHHHHHHh-hcCCeEEEEEcCCCCCCCCCC-------CCchHHHHHHHHHHHHHHHHHhC
Q 031716 23 SPVVVFAHGAGAPSSSDWMIKWKDMLGK-ALDAVEVVTFDYPYIAGGKRK-------APPKAEKLVEFHTDVVKGAVAKF 94 (154)
Q Consensus 23 ~~~il~lHG~~~~~~~~~~~~~~~~~~~-l~~~~~v~~~d~~g~g~~~~~-------~~~~~~~~~~~~~~~i~~~~~~~ 94 (154)
+..+++++|+.|-.+ +...|.+.+.+ +..++.|+++.+.||...... ..-.....++--.+.++..+...
T Consensus 2 ~~li~~IPGNPGlv~--fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~ 79 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVE--FYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQK 79 (266)
T ss_pred cEEEEEECCCCChHH--HHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhh
Confidence 568999999999763 22233333333 347899999999998533222 11123334444444555555543
Q ss_pred --CCCeEEEEEeCcchHHHHHHHhhcC---ccccEEEEeccCcccc
Q 031716 95 --PGHPLILAGKSMGSRVSCMVACKED---IAASAVLCLGYPLKVC 135 (154)
Q Consensus 95 --~~~~i~l~G~S~Gg~~a~~~a~~~~---~~i~~~v~~~~p~~~~ 135 (154)
+..+++|+|||.|++++++++.+.+ .+|.+++++-|.+...
T Consensus 80 ~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~i 125 (266)
T PF10230_consen 80 NKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIEDI 125 (266)
T ss_pred cCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccccc
Confidence 5569999999999999999999988 6788899887765443
No 82
>PRK10162 acetyl esterase; Provisional
Probab=99.24 E-value=1.1e-10 Score=85.24 Aligned_cols=105 Identities=16% Similarity=0.093 Sum_probs=67.0
Q ss_pred CCCcEEEEecCCCCCCCchHHHHHHHHHHhhc--CCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHH---HhC-
Q 031716 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKAL--DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAV---AKF- 94 (154)
Q Consensus 21 ~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~--~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~---~~~- 94 (154)
...|+||++||+|...++.. .+..+...+. .++.|+.+|||.. .....+. ..+|..+.++++. +.+
T Consensus 79 ~~~p~vv~~HGGg~~~g~~~--~~~~~~~~la~~~g~~Vv~vdYrla--pe~~~p~----~~~D~~~a~~~l~~~~~~~~ 150 (318)
T PRK10162 79 DSQATLFYLHGGGFILGNLD--THDRIMRLLASYSGCTVIGIDYTLS--PEARFPQ----AIEEIVAVCCYFHQHAEDYG 150 (318)
T ss_pred CCCCEEEEEeCCcccCCCch--hhhHHHHHHHHHcCCEEEEecCCCC--CCCCCCC----cHHHHHHHHHHHHHhHHHhC
Confidence 34689999999885443211 1222233222 5899999999974 2222222 2344444444443 334
Q ss_pred -CCCeEEEEEeCcchHHHHHHHhhc------CccccEEEEeccCcc
Q 031716 95 -PGHPLILAGKSMGSRVSCMVACKE------DIAASAVLCLGYPLK 133 (154)
Q Consensus 95 -~~~~i~l~G~S~Gg~~a~~~a~~~------~~~i~~~v~~~~p~~ 133 (154)
+.++++|+|+|+||.+++.++.+. +..+++++++.+.+.
T Consensus 151 ~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~ 196 (318)
T PRK10162 151 INMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYG 196 (318)
T ss_pred CChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccC
Confidence 346899999999999999988753 256888888876543
No 83
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.23 E-value=1.8e-10 Score=80.80 Aligned_cols=104 Identities=25% Similarity=0.240 Sum_probs=71.0
Q ss_pred CCCCCCcEEEEecCCCCCCCchHHHHHHHHHHhhc-CCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHh---
Q 031716 18 DDTSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKAL-DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAK--- 93 (154)
Q Consensus 18 ~~~~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~-~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~--- 93 (154)
...+.-|++||+||+.-.. . .|..+++++. .||.|+.+|+....... . ....+...+.++++.+.
T Consensus 12 ~~~g~yPVv~f~~G~~~~~--s---~Ys~ll~hvAShGyIVV~~d~~~~~~~~---~---~~~~~~~~~vi~Wl~~~L~~ 80 (259)
T PF12740_consen 12 SSAGTYPVVLFLHGFLLIN--S---WYSQLLEHVASHGYIVVAPDLYSIGGPD---D---TDEVASAAEVIDWLAKGLES 80 (259)
T ss_pred CCCCCcCEEEEeCCcCCCH--H---HHHHHHHHHHhCceEEEEecccccCCCC---c---chhHHHHHHHHHHHHhcchh
Confidence 4456689999999999432 2 3777787776 79999999966532111 1 11223333333333321
Q ss_pred -------CCCCeEEEEEeCcchHHHHHHHhhc-----CccccEEEEeccCc
Q 031716 94 -------FPGHPLILAGKSMGSRVSCMVACKE-----DIAASAVLCLGYPL 132 (154)
Q Consensus 94 -------~~~~~i~l~G~S~Gg~~a~~~a~~~-----~~~i~~~v~~~~p~ 132 (154)
.+..++.|.|||.||-++..++..+ ..+++++++++|.-
T Consensus 81 ~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 81 KLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred hccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 1345999999999999999999886 45799999998644
No 84
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.22 E-value=1.6e-10 Score=92.11 Aligned_cols=91 Identities=16% Similarity=0.198 Sum_probs=61.2
Q ss_pred CCcEEEEecCCCCCCCchHHHHHHHHHHhhc-CCeEEEEEcCCCCCCCCCC-----------CC-------------chH
Q 031716 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKAL-DAVEVVTFDYPYIAGGKRK-----------AP-------------PKA 76 (154)
Q Consensus 22 ~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~-~~~~v~~~d~~g~g~~~~~-----------~~-------------~~~ 76 (154)
..|+||++||++++.. .|..+.+.+. .+|+|+++|+||||.+... .. +..
T Consensus 448 g~P~VVllHG~~g~~~-----~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~ 522 (792)
T TIGR03502 448 GWPVVIYQHGITGAKE-----NALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNL 522 (792)
T ss_pred CCcEEEEeCCCCCCHH-----HHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCH
Confidence 3468999999999874 3556666664 7999999999999754221 00 122
Q ss_pred HHHHHHHHHHHHHHH------Hh------CCCCeEEEEEeCcchHHHHHHHhh
Q 031716 77 EKLVEFHTDVVKGAV------AK------FPGHPLILAGKSMGSRVSCMVACK 117 (154)
Q Consensus 77 ~~~~~~~~~~i~~~~------~~------~~~~~i~l~G~S~Gg~~a~~~a~~ 117 (154)
...+.|+......+. +. .+..+++++||||||.++..++..
T Consensus 523 rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 523 RQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred HHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 333344443333332 11 335699999999999999999975
No 85
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.22 E-value=2.1e-11 Score=81.75 Aligned_cols=113 Identities=13% Similarity=0.147 Sum_probs=81.7
Q ss_pred CCCCCCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCC
Q 031716 18 DDTSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGH 97 (154)
Q Consensus 18 ~~~~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 97 (154)
..+.....|+++.|..++...+|..........+ ...++++|-||+|.+.+..-.........-++..-++++.++.+
T Consensus 37 ~~G~G~~~iLlipGalGs~~tDf~pql~~l~k~l--~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da~~avdLM~aLk~~ 114 (277)
T KOG2984|consen 37 KYGHGPNYILLIPGALGSYKTDFPPQLLSLFKPL--QVTIVAWDPPGYGTSRPPERKFEVQFFMKDAEYAVDLMEALKLE 114 (277)
T ss_pred ecCCCCceeEecccccccccccCCHHHHhcCCCC--ceEEEEECCCCCCCCCCCcccchHHHHHHhHHHHHHHHHHhCCC
Confidence 3445566799999988888787765555544442 49999999999865444322222223334445556677778889
Q ss_pred eEEEEEeCcchHHHHHHHhhcCccccEEEEeccCc
Q 031716 98 PLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPL 132 (154)
Q Consensus 98 ~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~ 132 (154)
++.++|+|-||..|+.+|.++++.|+.++..+...
T Consensus 115 ~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~a 149 (277)
T KOG2984|consen 115 PFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAA 149 (277)
T ss_pred CeeEeeecCCCeEEEEeeccChhhhhhheeecccc
Confidence 99999999999999999999999999988776433
No 86
>PLN02872 triacylglycerol lipase
Probab=99.22 E-value=1.7e-11 Score=91.64 Aligned_cols=105 Identities=12% Similarity=0.091 Sum_probs=66.7
Q ss_pred CCcEEEEecCCCCCCCchHH-----HHHHHHHHhhcCCeEEEEEcCCCCCCCCC-----CCCc-----hHHH-HHHHHHH
Q 031716 22 SSPVVVFAHGAGAPSSSDWM-----IKWKDMLGKALDAVEVVTFDYPYIAGGKR-----KAPP-----KAEK-LVEFHTD 85 (154)
Q Consensus 22 ~~~~il~lHG~~~~~~~~~~-----~~~~~~~~~l~~~~~v~~~d~~g~g~~~~-----~~~~-----~~~~-~~~~~~~ 85 (154)
.+|+|+++||.+.++. .|. +.....+.+ +||+|+.+|+||++.+.. .... ..+. ...|+.+
T Consensus 73 ~~~~Vll~HGl~~ss~-~w~~~~~~~sla~~La~--~GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a 149 (395)
T PLN02872 73 RGPPVLLQHGLFMAGD-AWFLNSPEQSLGFILAD--HGFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAE 149 (395)
T ss_pred CCCeEEEeCccccccc-ceeecCcccchHHHHHh--CCCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHH
Confidence 4678999999987763 331 122333443 799999999999753211 0111 1112 2246666
Q ss_pred HHHHHHHhCCCCeEEEEEeCcchHHHHHHHhhcCc---cccEEEEeccC
Q 031716 86 VVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDI---AASAVLCLGYP 131 (154)
Q Consensus 86 ~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~---~i~~~v~~~~p 131 (154)
.++++.+.. .+++.++|||+||.+++.++ .+|+ +++.+++++|.
T Consensus 150 ~id~i~~~~-~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~ 196 (395)
T PLN02872 150 MIHYVYSIT-NSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPI 196 (395)
T ss_pred HHHHHHhcc-CCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcch
Confidence 666665443 36899999999999998655 4555 57777777654
No 87
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.20 E-value=5e-10 Score=75.65 Aligned_cols=94 Identities=14% Similarity=0.166 Sum_probs=68.7
Q ss_pred EEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeEEEEEeC
Q 031716 26 VVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKS 105 (154)
Q Consensus 26 il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~G~S 105 (154)
|+++||+.++..+.-....++.++.......+..++++.+ .++..+.+..+++....+.+.|+|.|
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~~~--------------p~~a~~~l~~~i~~~~~~~~~liGSS 67 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLPPF--------------PEEAIAQLEQLIEELKPENVVLIGSS 67 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCCcC--------------HHHHHHHHHHHHHhCCCCCeEEEEEC
Confidence 7999999998876655556666666445677778877742 23444556666666666669999999
Q ss_pred cchHHHHHHHhhcCccccEEEEeccCccccc
Q 031716 106 MGSRVSCMVACKEDIAASAVLCLGYPLKVCY 136 (154)
Q Consensus 106 ~Gg~~a~~~a~~~~~~i~~~v~~~~p~~~~~ 136 (154)
+||+.|..++.+++ +.+ |+++|.+....
T Consensus 68 lGG~~A~~La~~~~--~~a-vLiNPav~p~~ 95 (187)
T PF05728_consen 68 LGGFYATYLAERYG--LPA-VLINPAVRPYE 95 (187)
T ss_pred hHHHHHHHHHHHhC--CCE-EEEcCCCCHHH
Confidence 99999999999875 333 77888776544
No 88
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=99.19 E-value=8.2e-10 Score=77.23 Aligned_cols=114 Identities=14% Similarity=0.058 Sum_probs=78.8
Q ss_pred CCCCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCC--CchHHHHHHHHHHHHHHHHHhCCCC
Q 031716 20 TSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKA--PPKAEKLVEFHTDVVKGAVAKFPGH 97 (154)
Q Consensus 20 ~~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~ 97 (154)
..++.++||+||+..+. .+-....+++...+.-...++.+.||..+...... ..........+.+.++.+.+..+..
T Consensus 15 ~~~~~vlvfVHGyn~~f-~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~ 93 (233)
T PF05990_consen 15 SPDKEVLVFVHGYNNSF-EDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIK 93 (233)
T ss_pred CCCCeEEEEEeCCCCCH-HHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCc
Confidence 34678999999999875 44444566677766534489999999864322211 1123345556666677766666778
Q ss_pred eEEEEEeCcchHHHHHHHhh----cC-----ccccEEEEeccCccc
Q 031716 98 PLILAGKSMGSRVSCMVACK----ED-----IAASAVLCLGYPLKV 134 (154)
Q Consensus 98 ~i~l~G~S~Gg~~a~~~a~~----~~-----~~i~~~v~~~~p~~~ 134 (154)
+|.|++||||+.+.+..... .+ .++..+++.+|-++.
T Consensus 94 ~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~ 139 (233)
T PF05990_consen 94 RIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDN 139 (233)
T ss_pred eEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCH
Confidence 99999999999999987765 11 367888888876654
No 89
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=99.14 E-value=5e-10 Score=81.97 Aligned_cols=115 Identities=17% Similarity=0.199 Sum_probs=68.9
Q ss_pred CCCCcEEEEecCCCCCC-CchHHHHHHHHHHhh-cCCeEEEEEcCCCCCCCCCCCCch---HHHHHHHHHHHHHHHHHh-
Q 031716 20 TSSSPVVVFAHGAGAPS-SSDWMIKWKDMLGKA-LDAVEVVTFDYPYIAGGKRKAPPK---AEKLVEFHTDVVKGAVAK- 93 (154)
Q Consensus 20 ~~~~~~il~lHG~~~~~-~~~~~~~~~~~~~~l-~~~~~v~~~d~~g~g~~~~~~~~~---~~~~~~~~~~~i~~~~~~- 93 (154)
...+|++|++||+.++. ...|.....+.+-.. ..++.|+++||.... ...+... .....+.+++.+..+.+.
T Consensus 68 n~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a--~~~Y~~a~~n~~~vg~~la~~l~~L~~~~ 145 (331)
T PF00151_consen 68 NPSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGA--SNNYPQAVANTRLVGRQLAKFLSFLINNF 145 (331)
T ss_dssp -TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHH--SS-HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhc--cccccchhhhHHHHHHHHHHHHHHHHhhc
Confidence 45789999999999988 566655454433221 148999999997521 1111111 112223344445555533
Q ss_pred -CCCCeEEEEEeCcchHHHHHHHhhcCc--cccEEEEeccCccccc
Q 031716 94 -FPGHPLILAGKSMGSRVSCMVACKEDI--AASAVLCLGYPLKVCY 136 (154)
Q Consensus 94 -~~~~~i~l~G~S~Gg~~a~~~a~~~~~--~i~~~v~~~~p~~~~~ 136 (154)
.+.+++.|+|||+||.+|-.+++.... ++.++..++|+-+...
T Consensus 146 g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~F~ 191 (331)
T PF00151_consen 146 GVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPLFE 191 (331)
T ss_dssp ---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TTTT
T ss_pred CCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccccccc
Confidence 466799999999999999999998766 8999999998776543
No 90
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.14 E-value=4.4e-10 Score=74.97 Aligned_cols=91 Identities=19% Similarity=0.255 Sum_probs=65.8
Q ss_pred EEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeEEEEEeC
Q 031716 26 VVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKS 105 (154)
Q Consensus 26 il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~G~S 105 (154)
|+++||++++....|...|++.++. .++|..+++. .+ ..++|.+.++..+...+ ++++|+|||
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~---~~~V~~~~~~--------~P-----~~~~W~~~l~~~i~~~~-~~~ilVaHS 63 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLEN---SVRVEQPDWD--------NP-----DLDEWVQALDQAIDAID-EPTILVAHS 63 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTT---SEEEEEC--T--------S-------HHHHHHHHHHCCHC-T-TTEEEEEET
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCC---CeEEeccccC--------CC-----CHHHHHHHHHHHHhhcC-CCeEEEEeC
Confidence 6899999999888787767777765 3777766661 11 35788888888877654 469999999
Q ss_pred cchHHHHHHH-hhcCccccEEEEeccCcc
Q 031716 106 MGSRVSCMVA-CKEDIAASAVLCLGYPLK 133 (154)
Q Consensus 106 ~Gg~~a~~~a-~~~~~~i~~~v~~~~p~~ 133 (154)
.|+..++.++ .+...+++++++++++-.
T Consensus 64 LGc~~~l~~l~~~~~~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 64 LGCLTALRWLAEQSQKKVAGALLVAPFDP 92 (171)
T ss_dssp HHHHHHHHHHHHTCCSSEEEEEEES--SC
T ss_pred HHHHHHHHHHhhcccccccEEEEEcCCCc
Confidence 9999999999 667789999999998765
No 91
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.13 E-value=1.2e-09 Score=79.85 Aligned_cols=115 Identities=18% Similarity=0.137 Sum_probs=75.5
Q ss_pred CCCcEEEEecCCCCCCCchHHHHHHHHHHhhc--CCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHH--HHHHhCCC
Q 031716 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKAL--DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVK--GAVAKFPG 96 (154)
Q Consensus 21 ~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~--~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~--~~~~~~~~ 96 (154)
...|+||++||+|...++.....+..+...+. .++.|+++|||- ..+...|..+++....+.-..+ ++....+.
T Consensus 88 ~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRL--APEh~~Pa~y~D~~~Al~w~~~~~~~~~~~D~ 165 (336)
T KOG1515|consen 88 TKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRL--APEHPFPAAYDDGWAALKWVLKNSWLKLGADP 165 (336)
T ss_pred cCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCccc--CCCCCCCccchHHHHHHHHHHHhHHHHhCCCc
Confidence 56799999999887766322222333333321 689999999997 3344444444444333333333 22233567
Q ss_pred CeEEEEEeCcchHHHHHHHhhc------CccccEEEEeccCccccch
Q 031716 97 HPLILAGKSMGSRVSCMVACKE------DIAASAVLCLGYPLKVCYY 137 (154)
Q Consensus 97 ~~i~l~G~S~Gg~~a~~~a~~~------~~~i~~~v~~~~p~~~~~~ 137 (154)
++++|+|-|.||.+|..++.+. +.++++.|++-|.+.....
T Consensus 166 ~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~ 212 (336)
T KOG1515|consen 166 SRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDR 212 (336)
T ss_pred ccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCC
Confidence 7999999999999999988762 3578999999876655443
No 92
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.12 E-value=1.8e-10 Score=85.45 Aligned_cols=112 Identities=20% Similarity=0.264 Sum_probs=63.1
Q ss_pred CCCCCCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCC-CchHHHHHHHHHHHHHHHHHh--C
Q 031716 18 DDTSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKA-PPKAEKLVEFHTDVVKGAVAK--F 94 (154)
Q Consensus 18 ~~~~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~-~~~~~~~~~~~~~~i~~~~~~--~ 94 (154)
.++++.|+||++-|.-+.. .++...+.+.+.. .|+.++++|.||.|...... ..+.....+ .+++++.+. .
T Consensus 185 ~~~~p~P~VIv~gGlDs~q-eD~~~l~~~~l~~--rGiA~LtvDmPG~G~s~~~~l~~D~~~l~~---aVLd~L~~~p~V 258 (411)
T PF06500_consen 185 SGEKPYPTVIVCGGLDSLQ-EDLYRLFRDYLAP--RGIAMLTVDMPGQGESPKWPLTQDSSRLHQ---AVLDYLASRPWV 258 (411)
T ss_dssp SSSS-EEEEEEE--TTS-G-GGGHHHHHCCCHH--CT-EEEEE--TTSGGGTTT-S-S-CCHHHH---HHHHHHHHSTTE
T ss_pred CCCCCCCEEEEeCCcchhH-HHHHHHHHHHHHh--CCCEEEEEccCCCcccccCCCCcCHHHHHH---HHHHHHhcCCcc
Confidence 3445567666666655544 4443233333333 79999999999987543221 111112222 233333322 3
Q ss_pred CCCeEEEEEeCcchHHHHHHHhhcCccccEEEEeccCcccc
Q 031716 95 PGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKVC 135 (154)
Q Consensus 95 ~~~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~~~~ 135 (154)
+..+|.++|.|+||++|..+|..++++++++|+.+++++..
T Consensus 259 D~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ 299 (411)
T PF06500_consen 259 DHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHF 299 (411)
T ss_dssp EEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCG
T ss_pred ChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhh
Confidence 45699999999999999999988889999999999987654
No 93
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.11 E-value=9.1e-10 Score=80.16 Aligned_cols=106 Identities=19% Similarity=0.183 Sum_probs=72.8
Q ss_pred CCcEEEEecCCCCCCCchHHH--HHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHh-----C
Q 031716 22 SSPVVVFAHGAGAPSSSDWMI--KWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAK-----F 94 (154)
Q Consensus 22 ~~~~il~lHG~~~~~~~~~~~--~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~-----~ 94 (154)
..|+||++||++...+..... ........ .|+.|+.+|||-. ..... ...++|..+.++++.++ .
T Consensus 78 ~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~--~g~~vv~vdYrla--Pe~~~----p~~~~d~~~a~~~l~~~~~~~g~ 149 (312)
T COG0657 78 TAPVVLYLHGGGWVLGSLRTHDALVARLAAA--AGAVVVSVDYRLA--PEHPF----PAALEDAYAAYRWLRANAAELGI 149 (312)
T ss_pred CCcEEEEEeCCeeeecChhhhHHHHHHHHHH--cCCEEEecCCCCC--CCCCC----CchHHHHHHHHHHHHhhhHhhCC
Confidence 479999999988877633221 23333333 7999999999974 22222 33456666666666654 2
Q ss_pred CCCeEEEEEeCcchHHHHHHHhhcCc----cccEEEEeccCcccc
Q 031716 95 PGHPLILAGKSMGSRVSCMVACKEDI----AASAVLCLGYPLKVC 135 (154)
Q Consensus 95 ~~~~i~l~G~S~Gg~~a~~~a~~~~~----~i~~~v~~~~p~~~~ 135 (154)
+.++|+++|+|.||.+++.++..-.+ ...+.+++.|.+...
T Consensus 150 dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~ 194 (312)
T COG0657 150 DPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLT 194 (312)
T ss_pred CccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCc
Confidence 46789999999999999999987432 467788887665544
No 94
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.10 E-value=3.6e-10 Score=80.08 Aligned_cols=113 Identities=13% Similarity=0.151 Sum_probs=76.7
Q ss_pred CCCcEEEEecCCCCCCCchHHHHH-HHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHH-HHHHHHHHHHHHHHhCCCCe
Q 031716 21 SSSPVVVFAHGAGAPSSSDWMIKW-KDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEK-LVEFHTDVVKGAVAKFPGHP 98 (154)
Q Consensus 21 ~~~~~il~lHG~~~~~~~~~~~~~-~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~ 98 (154)
+++|++|..|..|-|..+.|...+ .+-.+.+.+++.++-+|.||+..+....+.++.. +++++++.+..++++++.+.
T Consensus 21 ~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~f~i~Hi~aPGqe~ga~~~p~~y~yPsmd~LAe~l~~Vl~~f~lk~ 100 (283)
T PF03096_consen 21 GNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQNFCIYHIDAPGQEEGAATLPEGYQYPSMDQLAEMLPEVLDHFGLKS 100 (283)
T ss_dssp TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTTSEEEEEE-TTTSTT-----TT-----HHHHHCTHHHHHHHHT---
T ss_pred CCCceEEEeccccccchHHHHHHhcchhHHHHhhceEEEEEeCCCCCCCcccccccccccCHHHHHHHHHHHHHhCCccE
Confidence 369999999999987743232111 2334445578999999999998887766666443 88999999999999999999
Q ss_pred EEEEEeCcchHHHHHHHhhcCccccEEEEeccCcc
Q 031716 99 LILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLK 133 (154)
Q Consensus 99 i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~~ 133 (154)
++-+|-.+||++-..+|.++|+++.|+|++++...
T Consensus 101 vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~ 135 (283)
T PF03096_consen 101 VIGFGVGAGANILARFALKHPERVLGLILVNPTCT 135 (283)
T ss_dssp EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S
T ss_pred EEEEeeccchhhhhhccccCccceeEEEEEecCCC
Confidence 99999999999999999999999999999976543
No 95
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.10 E-value=8.5e-10 Score=91.32 Aligned_cols=108 Identities=14% Similarity=0.216 Sum_probs=65.2
Q ss_pred CCcEEEEecCCCCCCCchHHHH-HHHHHHhhc-CCeEEEEEcCCCCCCCCCCC---CchHHHHHHHHHHHHHHHHHhCCC
Q 031716 22 SSPVVVFAHGAGAPSSSDWMIK-WKDMLGKAL-DAVEVVTFDYPYIAGGKRKA---PPKAEKLVEFHTDVVKGAVAKFPG 96 (154)
Q Consensus 22 ~~~~il~lHG~~~~~~~~~~~~-~~~~~~~l~-~~~~v~~~d~~g~g~~~~~~---~~~~~~~~~~~~~~i~~~~~~~~~ 96 (154)
..+++|++||++.+. ..|... -..+++.|. .||+|+++||.. ..... .......+..+.+.++.+.+. ..
T Consensus 66 ~~~plllvhg~~~~~-~~~d~~~~~s~v~~L~~~g~~v~~~d~G~---~~~~~~~~~~~l~~~i~~l~~~l~~v~~~-~~ 140 (994)
T PRK07868 66 VGPPVLMVHPMMMSA-DMWDVTRDDGAVGILHRAGLDPWVIDFGS---PDKVEGGMERNLADHVVALSEAIDTVKDV-TG 140 (994)
T ss_pred CCCcEEEECCCCCCc-cceecCCcccHHHHHHHCCCEEEEEcCCC---CChhHcCccCCHHHHHHHHHHHHHHHHHh-hC
Confidence 558899999998776 333211 000133332 689999999632 11110 011112222233333332222 34
Q ss_pred CeEEEEEeCcchHHHHHHHhhc-CccccEEEEeccCccc
Q 031716 97 HPLILAGKSMGSRVSCMVACKE-DIAASAVLCLGYPLKV 134 (154)
Q Consensus 97 ~~i~l~G~S~Gg~~a~~~a~~~-~~~i~~~v~~~~p~~~ 134 (154)
+++.++||||||.+++.++..+ ++++++++++++|++.
T Consensus 141 ~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~ 179 (994)
T PRK07868 141 RDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDT 179 (994)
T ss_pred CceEEEEEChhHHHHHHHHHhcCCCccceEEEEeccccc
Confidence 5899999999999999988754 5689999999888654
No 96
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.10 E-value=3.1e-10 Score=82.52 Aligned_cols=114 Identities=13% Similarity=0.098 Sum_probs=82.4
Q ss_pred CCCcEEEEecCCCCCCCchHH------HHHHHHHHh---hc-CCeEEEEEcCCCCCCCCCCCC---ch--------HHHH
Q 031716 21 SSSPVVVFAHGAGAPSSSDWM------IKWKDMLGK---AL-DAVEVVTFDYPYIAGGKRKAP---PK--------AEKL 79 (154)
Q Consensus 21 ~~~~~il~lHG~~~~~~~~~~------~~~~~~~~~---l~-~~~~v~~~d~~g~g~~~~~~~---~~--------~~~~ 79 (154)
...++|+++|+..++....-. -.|..++.. +. ..|-|+++|-.|...|+..+. +. ....
T Consensus 49 ~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~t 128 (368)
T COG2021 49 EKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVIT 128 (368)
T ss_pred cCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCccc
Confidence 345789999999886542110 025555433 21 469999999988543332211 11 2346
Q ss_pred HHHHHHHHHHHHHhCCCCeEE-EEEeCcchHHHHHHHhhcCccccEEEEeccCccc
Q 031716 80 VEFHTDVVKGAVAKFPGHPLI-LAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKV 134 (154)
Q Consensus 80 ~~~~~~~i~~~~~~~~~~~i~-l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~~~ 134 (154)
+.|+++..+.++++++.+++. ++|-||||+.+++++..+|+++..++.++.....
T Consensus 129 i~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~ 184 (368)
T COG2021 129 IRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARL 184 (368)
T ss_pred HHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccC
Confidence 789998888899999999988 8899999999999999999999999888765543
No 97
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.09 E-value=2.1e-09 Score=74.27 Aligned_cols=108 Identities=20% Similarity=0.301 Sum_probs=72.2
Q ss_pred CCCcEEEEecCCCCCCCchHHH--HHHHHHHhhcCCeEEEEEcCCCCCCC-C--C---CCCchHHHHHHHHHHHHHHHHH
Q 031716 21 SSSPVVVFAHGAGAPSSSDWMI--KWKDMLGKALDAVEVVTFDYPYIAGG-K--R---KAPPKAEKLVEFHTDVVKGAVA 92 (154)
Q Consensus 21 ~~~~~il~lHG~~~~~~~~~~~--~~~~~~~~l~~~~~v~~~d~~g~g~~-~--~---~~~~~~~~~~~~~~~~i~~~~~ 92 (154)
.+.|+||++||.+++. .++.. .|.++.++ .+|.|+.|+....... . . ............+.+.++++.+
T Consensus 14 ~~~PLVv~LHG~~~~a-~~~~~~s~~~~lAd~--~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~ 90 (220)
T PF10503_consen 14 GPVPLVVVLHGCGQSA-EDFAAGSGWNALADR--EGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAA 90 (220)
T ss_pred CCCCEEEEeCCCCCCH-HHHHhhcCHHHHhhc--CCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhh
Confidence 3579999999999876 33322 34455555 7899999985421000 0 0 0001111233455566666666
Q ss_pred hC--CCCeEEEEEeCcchHHHHHHHhhcCccccEEEEeccC
Q 031716 93 KF--PGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYP 131 (154)
Q Consensus 93 ~~--~~~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p 131 (154)
+. +.++|++.|+|.||+++..++..+|+.+.++...+..
T Consensus 91 ~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~ 131 (220)
T PF10503_consen 91 RYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGV 131 (220)
T ss_pred hcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeeccc
Confidence 64 4569999999999999999999999999988876543
No 98
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.09 E-value=2.2e-09 Score=75.68 Aligned_cols=101 Identities=17% Similarity=0.208 Sum_probs=73.4
Q ss_pred cEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeEEEEE
Q 031716 24 PVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAG 103 (154)
Q Consensus 24 ~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~G 103 (154)
|+++++|+.+|... .|..+...+.+...++..+.|+.+.+.. .....+..++.+.+.|+.. .+..++.|+|
T Consensus 1 ~pLF~fhp~~G~~~-----~~~~L~~~l~~~~~v~~l~a~g~~~~~~-~~~~l~~~a~~yv~~Ir~~---QP~GPy~L~G 71 (257)
T COG3319 1 PPLFCFHPAGGSVL-----AYAPLAAALGPLLPVYGLQAPGYGAGEQ-PFASLDDMAAAYVAAIRRV---QPEGPYVLLG 71 (257)
T ss_pred CCEEEEcCCCCcHH-----HHHHHHHHhccCceeeccccCccccccc-ccCCHHHHHHHHHHHHHHh---CCCCCEEEEe
Confidence 57899999988764 4676777777789999999999754333 2233333444444444333 5667999999
Q ss_pred eCcchHHHHHHHhh---cCccccEEEEeccCcc
Q 031716 104 KSMGSRVSCMVACK---EDIAASAVLCLGYPLK 133 (154)
Q Consensus 104 ~S~Gg~~a~~~a~~---~~~~i~~~v~~~~p~~ 133 (154)
||+||.+|+.+|.+ ..+.+.-+++++++..
T Consensus 72 ~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 72 WSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred eccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 99999999999987 4557888889988776
No 99
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=99.09 E-value=1.3e-09 Score=75.46 Aligned_cols=115 Identities=15% Similarity=0.130 Sum_probs=66.4
Q ss_pred CCCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCC--Ce
Q 031716 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPG--HP 98 (154)
Q Consensus 21 ~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~ 98 (154)
++...||++||..++. .+|. .+...+....+.+.-..+.+.+..........+.+...+.+++.+...++.... .+
T Consensus 2 ~~~hLvV~vHGL~G~~-~d~~-~~~~~l~~~~~~~~~~~i~~~~~~~n~~~T~~gI~~~g~rL~~eI~~~~~~~~~~~~~ 79 (217)
T PF05057_consen 2 KPVHLVVFVHGLWGNP-ADMR-YLKNHLEKIPEDLPNARIVVLGYSNNEFKTFDGIDVCGERLAEEILEHIKDYESKIRK 79 (217)
T ss_pred CCCEEEEEeCCCCCCH-HHHH-HHHHHHHHhhhhcchhhhhhhcccccccccchhhHHHHHHHHHHHHHhcccccccccc
Confidence 4567899999999985 5553 344444442112211122222211111112234455566677777666665544 48
Q ss_pred EEEEEeCcchHHHHHHHhh---cC----c-----cccEEEEeccCccccch
Q 031716 99 LILAGKSMGSRVSCMVACK---ED----I-----AASAVLCLGYPLKVCYY 137 (154)
Q Consensus 99 i~l~G~S~Gg~~a~~~a~~---~~----~-----~i~~~v~~~~p~~~~~~ 137 (154)
|.++|||+||.++-.+... .+ + .+...+.+++|..+...
T Consensus 80 IsfIgHSLGGli~r~al~~~~~~~~~~~~~~~~~~~~~fitlatPH~G~~~ 130 (217)
T PF05057_consen 80 ISFIGHSLGGLIARYALGLLHDKPQYFPGFFQKIKPHNFITLATPHLGSRY 130 (217)
T ss_pred ceEEEecccHHHHHHHHHHhhhccccccccccceeeeeEEEeCCCCCCCcc
Confidence 9999999999998766653 21 1 23345667888877643
No 100
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=99.09 E-value=4.4e-10 Score=77.54 Aligned_cols=88 Identities=18% Similarity=0.240 Sum_probs=51.7
Q ss_pred cEEEEecCCCCCCCchHHHHHHHHHHhhcCCeE---EEEEcCCCCCCCCCCCCch---HHHHHHHHHHHHHHHHHhCCCC
Q 031716 24 PVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVE---VVTFDYPYIAGGKRKAPPK---AEKLVEFHTDVVKGAVAKFPGH 97 (154)
Q Consensus 24 ~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~---v~~~d~~g~g~~~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~ 97 (154)
.+|||+||.+++....|. .+.+.+.. +||. +++++|-.. .... .... ......++++.|+.+++..+.
T Consensus 2 ~PVVlVHG~~~~~~~~w~-~~~~~l~~--~GY~~~~vya~tyg~~-~~~~-~~~~~~~~~~~~~~l~~fI~~Vl~~TGa- 75 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWS-TLAPYLKA--AGYCDSEVYALTYGSG-NGSP-SVQNAHMSCESAKQLRAFIDAVLAYTGA- 75 (219)
T ss_dssp --EEEE--TTTTTCGGCC-HHHHHHHH--TT--CCCEEEE--S-C-CHHT-HHHHHHB-HHHHHHHHHHHHHHHHHHT--
T ss_pred CCEEEECCCCcchhhCHH-HHHHHHHH--cCCCcceeEeccCCCC-CCCC-cccccccchhhHHHHHHHHHHHHHhhCC-
Confidence 369999999987655443 35555555 7998 799998542 1111 0111 112345677777777777788
Q ss_pred eEEEEEeCcchHHHHHHHhh
Q 031716 98 PLILAGKSMGSRVSCMVACK 117 (154)
Q Consensus 98 ~i~l~G~S~Gg~~a~~~a~~ 117 (154)
+|-|+|||||+.++..+.+.
T Consensus 76 kVDIVgHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 76 KVDIVGHSMGGTIARYYIKG 95 (219)
T ss_dssp -EEEEEETCHHHHHHHHHHH
T ss_pred EEEEEEcCCcCHHHHHHHHH
Confidence 99999999999999998875
No 101
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.07 E-value=2.6e-09 Score=74.44 Aligned_cols=109 Identities=17% Similarity=0.153 Sum_probs=70.7
Q ss_pred ccCCCCCCCcEEEEecCCCCCCCchHHHHHHHHHHhhc-CCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHh
Q 031716 15 ECGDDTSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKAL-DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAK 93 (154)
Q Consensus 15 ~~~~~~~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~-~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~ 93 (154)
.....++.-|+|+|+||+.-... .|.+++..+. .||.|+++++-.. ........-.......+++..-+.+
T Consensus 38 ~tP~~~G~yPVilF~HG~~l~ns-----~Ys~lL~HIASHGfIVVAPQl~~~---~~p~~~~Ei~~aa~V~~WL~~gL~~ 109 (307)
T PF07224_consen 38 VTPSEAGTYPVILFLHGFNLYNS-----FYSQLLAHIASHGFIVVAPQLYTL---FPPDGQDEIKSAASVINWLPEGLQH 109 (307)
T ss_pred ecCCcCCCccEEEEeechhhhhH-----HHHHHHHHHhhcCeEEEechhhcc---cCCCchHHHHHHHHHHHHHHhhhhh
Confidence 33344667899999999776432 5788888876 7999999998652 1111111112223333333332222
Q ss_pred -------CCCCeEEEEEeCcchHHHHHHHhhcC--ccccEEEEeccC
Q 031716 94 -------FPGHPLILAGKSMGSRVSCMVACKED--IAASAVLCLGYP 131 (154)
Q Consensus 94 -------~~~~~i~l~G~S~Gg~~a~~~a~~~~--~~i~~~v~~~~p 131 (154)
-+..++.++|||.||-.|..+|..+. -++.++|.++|.
T Consensus 110 ~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV 156 (307)
T PF07224_consen 110 VLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPV 156 (307)
T ss_pred hCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheeccccc
Confidence 24569999999999999999998763 257788877753
No 102
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.04 E-value=1.9e-09 Score=74.23 Aligned_cols=83 Identities=11% Similarity=0.059 Sum_probs=62.1
Q ss_pred CCeEEEEEcCCCCCCC-----CCCCCchHHHHHHHHHHHHHHHHHhC--CCCeEEEEEeCcchHHHHHHHhhcCccccEE
Q 031716 53 DAVEVVTFDYPYIAGG-----KRKAPPKAEKLVEFHTDVVKGAVAKF--PGHPLILAGKSMGSRVSCMVACKEDIAASAV 125 (154)
Q Consensus 53 ~~~~v~~~d~~g~g~~-----~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~ 125 (154)
+||.|+.+|+||.++- .....+.....++|..+.++.++++. +.++|.++|+|+||+++..++.++|+.++++
T Consensus 13 ~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~~~~~f~a~ 92 (213)
T PF00326_consen 13 QGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQHPDRFKAA 92 (213)
T ss_dssp TT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHHTCCGSSEE
T ss_pred CCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhcccceeeeee
Confidence 7999999999996411 01112223456788999999998874 5579999999999999999999999999999
Q ss_pred EEeccCcccc
Q 031716 126 LCLGYPLKVC 135 (154)
Q Consensus 126 v~~~~p~~~~ 135 (154)
++.++.....
T Consensus 93 v~~~g~~d~~ 102 (213)
T PF00326_consen 93 VAGAGVSDLF 102 (213)
T ss_dssp EEESE-SSTT
T ss_pred eccceecchh
Confidence 9887765433
No 103
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.03 E-value=5.9e-09 Score=70.78 Aligned_cols=112 Identities=17% Similarity=0.130 Sum_probs=80.8
Q ss_pred CCCCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCC-CCchHHHHHHHHHHHHHHHHHhCCCCe
Q 031716 20 TSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRK-APPKAEKLVEFHTDVVKGAVAKFPGHP 98 (154)
Q Consensus 20 ~~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~ 98 (154)
.+...++|++||+-++.....+...+..+++ .++.++.+|++|.|.++.. ++-.....++|+..+++.+-+.. ..-
T Consensus 30 tgs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~--~gis~fRfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~~n-r~v 106 (269)
T KOG4667|consen 30 TGSTEIVVLCHGFRSHKNAIIMKNVAKALEK--EGISAFRFDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSNSN-RVV 106 (269)
T ss_pred cCCceEEEEeeccccccchHHHHHHHHHHHh--cCceEEEEEecCCCCcCCccccCcccchHHHHHHHHHHhccCc-eEE
Confidence 3456789999999998876555566666666 7999999999997754433 22334455677877777776532 223
Q ss_pred EEEEEeCcchHHHHHHHhhcCccccEEEEeccCcccc
Q 031716 99 LILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKVC 135 (154)
Q Consensus 99 i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~~~~ 135 (154)
-+++|||-||.+++.++.++.+ +..++-++.-....
T Consensus 107 ~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~ 142 (269)
T KOG4667|consen 107 PVILGHSKGGDVVLLYASKYHD-IRNVINCSGRYDLK 142 (269)
T ss_pred EEEEeecCccHHHHHHHHhhcC-chheEEcccccchh
Confidence 4578999999999999999877 66777666555443
No 104
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.03 E-value=3.4e-09 Score=74.87 Aligned_cols=111 Identities=14% Similarity=0.148 Sum_probs=89.0
Q ss_pred CCCcEEEEecCCCCCCCchHHHHH-HHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHH-HHHHHHHHHHHHHHHhCCCCe
Q 031716 21 SSSPVVVFAHGAGAPSSSDWMIKW-KDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAE-KLVEFHTDVVKGAVAKFPGHP 98 (154)
Q Consensus 21 ~~~~~il~lHG~~~~~~~~~~~~~-~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~ 98 (154)
.++|++|-.|..|-+..+.+...+ ..-...+..++.++.+|-||+..+....+.++. .+++++++.+...+++++.+.
T Consensus 44 ~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~fcv~HV~~PGqe~gAp~~p~~y~yPsmd~LAd~l~~VL~~f~lk~ 123 (326)
T KOG2931|consen 44 GNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEHFCVYHVDAPGQEDGAPSFPEGYPYPSMDDLADMLPEVLDHFGLKS 123 (326)
T ss_pred CCCceEEEecccccchHhHhHHhhcCHhHHHHHhheEEEecCCCccccCCccCCCCCCCCCHHHHHHHHHHHHHhcCcce
Confidence 368899999999988754342111 112223335699999999999888776666633 378999999999999999999
Q ss_pred EEEEEeCcchHHHHHHHhhcCccccEEEEeccC
Q 031716 99 LILAGKSMGSRVSCMVACKEDIAASAVLCLGYP 131 (154)
Q Consensus 99 i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p 131 (154)
++-+|-..|+++-..+|.+||+++.|+|+++..
T Consensus 124 vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~ 156 (326)
T KOG2931|consen 124 VIGMGVGAGAYILARFALNHPERVLGLVLINCD 156 (326)
T ss_pred EEEecccccHHHHHHHHhcChhheeEEEEEecC
Confidence 999999999999999999999999999999753
No 105
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=99.03 E-value=6.4e-09 Score=75.53 Aligned_cols=113 Identities=16% Similarity=0.157 Sum_probs=84.3
Q ss_pred CCCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCC--CCCCCCchHHHHHHHHHHHHHHHHHhCCCCe
Q 031716 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAG--GKRKAPPKAEKLVEFHTDVVKGAVAKFPGHP 98 (154)
Q Consensus 21 ~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 98 (154)
..+.+++|+||++-+- .+-.....++..........+.+.||..+. ++...-+...+...++...++.+.+..+.++
T Consensus 114 ~~k~vlvFvHGfNntf-~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~ 192 (377)
T COG4782 114 SAKTVLVFVHGFNNTF-EDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKR 192 (377)
T ss_pred CCCeEEEEEcccCCch-hHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCce
Confidence 4677999999988765 444556788888877778888999996542 2222233455677788888888888888889
Q ss_pred EEEEEeCcchHHHHHHHhhc--------CccccEEEEeccCccc
Q 031716 99 LILAGKSMGSRVSCMVACKE--------DIAASAVLCLGYPLKV 134 (154)
Q Consensus 99 i~l~G~S~Gg~~a~~~a~~~--------~~~i~~~v~~~~p~~~ 134 (154)
|.|++||||.+++++...+. +.+++-+|+.+|-.+.
T Consensus 193 I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~ 236 (377)
T COG4782 193 IYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDV 236 (377)
T ss_pred EEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCCh
Confidence 99999999999999888762 3357778887765543
No 106
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.03 E-value=4.5e-09 Score=72.64 Aligned_cols=101 Identities=18% Similarity=0.226 Sum_probs=68.0
Q ss_pred CCCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHH-hCCCCeE
Q 031716 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVA-KFPGHPL 99 (154)
Q Consensus 21 ~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~i 99 (154)
..++.++++|=.|+++. .|.....++...+.++.+++||.+..... + ....++++++.+...+. ....++.
T Consensus 5 ~~~~~L~cfP~AGGsa~-----~fr~W~~~lp~~iel~avqlPGR~~r~~e-p--~~~di~~Lad~la~el~~~~~d~P~ 76 (244)
T COG3208 5 GARLRLFCFPHAGGSAS-----LFRSWSRRLPADIELLAVQLPGRGDRFGE-P--LLTDIESLADELANELLPPLLDAPF 76 (244)
T ss_pred CCCceEEEecCCCCCHH-----HHHHHHhhCCchhheeeecCCCcccccCC-c--ccccHHHHHHHHHHHhccccCCCCe
Confidence 44567888888777763 24444445556799999999998543322 1 22345666666666655 4556799
Q ss_pred EEEEeCcchHHHHHHHhhc---CccccEEEEec
Q 031716 100 ILAGKSMGSRVSCMVACKE---DIAASAVLCLG 129 (154)
Q Consensus 100 ~l~G~S~Gg~~a~~~a~~~---~~~i~~~v~~~ 129 (154)
.++||||||++|.++|.+. ...+.++...+
T Consensus 77 alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg 109 (244)
T COG3208 77 ALFGHSMGAMLAFEVARRLERAGLPPRALFISG 109 (244)
T ss_pred eecccchhHHHHHHHHHHHHHcCCCcceEEEec
Confidence 9999999999999999873 22355555554
No 107
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.02 E-value=1.9e-09 Score=85.20 Aligned_cols=106 Identities=16% Similarity=0.148 Sum_probs=69.3
Q ss_pred CcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCC------CchHHHHHHHHHHHHHHHHHh--C
Q 031716 23 SPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKA------PPKAEKLVEFHTDVVKGAVAK--F 94 (154)
Q Consensus 23 ~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~------~~~~~~~~~~~~~~i~~~~~~--~ 94 (154)
-|+||++||+.............+.+.. .||.|+.+|+||.. |.... -.-.....+|+.+.++.+.+. .
T Consensus 394 yP~i~~~hGGP~~~~~~~~~~~~q~~~~--~G~~V~~~n~RGS~-GyG~~F~~~~~~~~g~~~~~D~~~~~~~l~~~~~~ 470 (620)
T COG1506 394 YPLIVYIHGGPSAQVGYSFNPEIQVLAS--AGYAVLAPNYRGST-GYGREFADAIRGDWGGVDLEDLIAAVDALVKLPLV 470 (620)
T ss_pred CCEEEEeCCCCccccccccchhhHHHhc--CCeEEEEeCCCCCC-ccHHHHHHhhhhccCCccHHHHHHHHHHHHhCCCc
Confidence 3899999999765533111223333333 79999999999863 22111 011223567788888844443 2
Q ss_pred CCCeEEEEEeCcchHHHHHHHhhcCccccEEEEeccCc
Q 031716 95 PGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPL 132 (154)
Q Consensus 95 ~~~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~ 132 (154)
+.+++.|.|||+||+++++.+.+.+ .+++.+...+..
T Consensus 471 d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~ 507 (620)
T COG1506 471 DPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGV 507 (620)
T ss_pred ChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcc
Confidence 4459999999999999999999987 566665554433
No 108
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=99.00 E-value=2.6e-09 Score=80.84 Aligned_cols=92 Identities=9% Similarity=0.034 Sum_probs=70.5
Q ss_pred HHHHHHHhhc-CCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCcchHHHHHHHhhcCc-
Q 031716 43 KWKDMLGKAL-DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDI- 120 (154)
Q Consensus 43 ~~~~~~~~l~-~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~- 120 (154)
.|..+++.|. .||.+ ..|++|++..-+. ........+++.+.++.+.+..+..+++|+||||||.++..++..+|+
T Consensus 109 ~~~~li~~L~~~GY~~-~~dL~g~gYDwR~-~~~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~p~~ 186 (440)
T PLN02733 109 YFHDMIEQLIKWGYKE-GKTLFGFGYDFRQ-SNRLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLHSDV 186 (440)
T ss_pred HHHHHHHHHHHcCCcc-CCCcccCCCCccc-cccHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHCCHh
Confidence 4777777776 56644 7899987643332 233345567888888888888788899999999999999999988775
Q ss_pred ---cccEEEEeccCccccc
Q 031716 121 ---AASAVLCLGYPLKVCY 136 (154)
Q Consensus 121 ---~i~~~v~~~~p~~~~~ 136 (154)
.|+.+|++++|+.+..
T Consensus 187 ~~k~I~~~I~la~P~~Gs~ 205 (440)
T PLN02733 187 FEKYVNSWIAIAAPFQGAP 205 (440)
T ss_pred HHhHhccEEEECCCCCCCc
Confidence 3788999999998775
No 109
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=98.92 E-value=2.4e-08 Score=69.07 Aligned_cols=105 Identities=16% Similarity=0.115 Sum_probs=63.9
Q ss_pred CCCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHH------------HHHHHHHHHHH
Q 031716 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAE------------KLVEFHTDVVK 88 (154)
Q Consensus 21 ~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~------------~~~~~~~~~i~ 88 (154)
++.|.||++|+..|-. +....+++.+.. .||.|++||+-+-............ ....++...+.
T Consensus 12 ~~~~~Vvv~~d~~G~~--~~~~~~ad~lA~--~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~ 87 (218)
T PF01738_consen 12 GPRPAVVVIHDIFGLN--PNIRDLADRLAE--EGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVD 87 (218)
T ss_dssp SSEEEEEEE-BTTBS---HHHHHHHHHHHH--TT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCc--hHHHHHHHHHHh--cCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 4689999999988753 444446666655 7999999998652110111111111 11223333444
Q ss_pred HHHHhC--CCCeEEEEEeCcchHHHHHHHhhcCccccEEEEecc
Q 031716 89 GAVAKF--PGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGY 130 (154)
Q Consensus 89 ~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~ 130 (154)
.+.++. ..++|.++|+|+||.+++.++.+. ..+++++..-+
T Consensus 88 ~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg 130 (218)
T PF01738_consen 88 YLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYG 130 (218)
T ss_dssp HHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-
T ss_pred HHHhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcC
Confidence 444433 346999999999999999999987 56888887755
No 110
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.92 E-value=2.3e-08 Score=70.60 Aligned_cols=110 Identities=19% Similarity=0.201 Sum_probs=66.0
Q ss_pred CCcEEEEecCCCCCCCchHHHHHHHHHHhhc--C----CeEEEEEcCCCC----CC--CCCCC----------C-chHHH
Q 031716 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKAL--D----AVEVVTFDYPYI----AG--GKRKA----------P-PKAEK 78 (154)
Q Consensus 22 ~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~--~----~~~v~~~d~~g~----g~--~~~~~----------~-~~~~~ 78 (154)
...+.||+||++++..+ +..++..+. . ..-++.++--|. |. ..... . .....
T Consensus 10 ~~tPTifihG~~gt~~s-----~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~ 84 (255)
T PF06028_consen 10 STTPTIFIHGYGGTANS-----FNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKK 84 (255)
T ss_dssp S-EEEEEE--TTGGCCC-----CHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHH
T ss_pred CCCcEEEECCCCCChhH-----HHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHH
Confidence 45579999999998853 334444432 2 223333333331 11 11000 1 13445
Q ss_pred HHHHHHHHHHHHHHhCCCCeEEEEEeCcchHHHHHHHhhcCc-----cccEEEEeccCccccc
Q 031716 79 LVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDI-----AASAVLCLGYPLKVCY 136 (154)
Q Consensus 79 ~~~~~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~-----~i~~~v~~~~p~~~~~ 136 (154)
....+..++.++.+++..+++.++||||||..++.++..+.. .+..+|.++.|+.+..
T Consensus 85 qa~wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~ 147 (255)
T PF06028_consen 85 QAKWLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGIL 147 (255)
T ss_dssp HHHHHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTT
T ss_pred HHHHHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccc
Confidence 566677778888888899999999999999999999887532 4799999999998764
No 111
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.92 E-value=4.7e-08 Score=72.08 Aligned_cols=112 Identities=14% Similarity=0.165 Sum_probs=75.5
Q ss_pred CCCcEEEEecCCCCCCCch-H-HHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCe
Q 031716 21 SSSPVVVFAHGAGAPSSSD-W-MIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHP 98 (154)
Q Consensus 21 ~~~~~il~lHG~~~~~~~~-~-~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 98 (154)
+..|+||++||+|...... . ...+..+...+ ...+++..||.-.. +............+..+..+.+++..+.+.
T Consensus 120 k~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l-~~~SILvLDYsLt~--~~~~~~~yPtQL~qlv~~Y~~Lv~~~G~~n 196 (374)
T PF10340_consen 120 KSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLL-PEVSILVLDYSLTS--SDEHGHKYPTQLRQLVATYDYLVESEGNKN 196 (374)
T ss_pred CCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHc-CCCeEEEEeccccc--cccCCCcCchHHHHHHHHHHHHHhccCCCe
Confidence 3579999999988766521 1 11222222223 46699999998642 011122234456778888888886667789
Q ss_pred EEEEEeCcchHHHHHHHhh--cC---ccccEEEEeccCcccc
Q 031716 99 LILAGKSMGSRVSCMVACK--ED---IAASAVLCLGYPLKVC 135 (154)
Q Consensus 99 i~l~G~S~Gg~~a~~~a~~--~~---~~i~~~v~~~~p~~~~ 135 (154)
|+|+|-|+||.+++.+++. +. ...+++|+++|.+...
T Consensus 197 I~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 197 IILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred EEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 9999999999999987764 11 2367899999877655
No 112
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.92 E-value=5e-08 Score=68.41 Aligned_cols=104 Identities=13% Similarity=0.098 Sum_probs=67.7
Q ss_pred CCCcEEEEecCCCCCCCchHHHHHHHHHHhhc-CCeEEEEEcCCCCCCCCCCCC--ch-----------HHHHHHHHHHH
Q 031716 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKAL-DAVEVVTFDYPYIAGGKRKAP--PK-----------AEKLVEFHTDV 86 (154)
Q Consensus 21 ~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~-~~~~v~~~d~~g~g~~~~~~~--~~-----------~~~~~~~~~~~ 86 (154)
.+.|.||++|+..+-.. .+.++.+++. .||.+++||+-+......... .. ......+....
T Consensus 25 ~~~P~VIv~hei~Gl~~-----~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~ 99 (236)
T COG0412 25 GGFPGVIVLHEIFGLNP-----HIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAA 99 (236)
T ss_pred CCCCEEEEEecccCCch-----HHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHH
Confidence 33489999999887653 3445554444 899999999765321111111 10 02233444445
Q ss_pred HHHHHHhC--CCCeEEEEEeCcchHHHHHHHhhcCccccEEEEecc
Q 031716 87 VKGAVAKF--PGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGY 130 (154)
Q Consensus 87 i~~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~ 130 (154)
+.++..+- +.++|.++|+||||.+++.++.+.| .+++.+++-+
T Consensus 100 ~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg 144 (236)
T COG0412 100 LDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYG 144 (236)
T ss_pred HHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecC
Confidence 55554432 3568999999999999999999876 6888887643
No 113
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.90 E-value=5.5e-09 Score=77.94 Aligned_cols=108 Identities=18% Similarity=0.183 Sum_probs=54.5
Q ss_pred CCCcEEEEecCCCCCCCchHHHHHHHHHHhhc-CCeEEEEEcCCCCCCCC-----------C----------------CC
Q 031716 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKAL-DAVEVVTFDYPYIAGGK-----------R----------------KA 72 (154)
Q Consensus 21 ~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~-~~~~v~~~d~~g~g~~~-----------~----------------~~ 72 (154)
+.-|+|||-||.+++.. .+..+...|. +||.|+++|+|...... . ..
T Consensus 98 ~~~PvvIFSHGlgg~R~-----~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRT-----SYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDF 172 (379)
T ss_dssp S-EEEEEEE--TT--TT-----TTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE----
T ss_pred CCCCEEEEeCCCCcchh-----hHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccc
Confidence 56799999999999874 2444444443 79999999999531000 0 00
Q ss_pred -Cc--------hHHHHHHHHHHHHHHHHH----------------------hCCCCeEEEEEeCcchHHHHHHHhhcCcc
Q 031716 73 -PP--------KAEKLVEFHTDVVKGAVA----------------------KFPGHPLILAGKSMGSRVSCMVACKEDIA 121 (154)
Q Consensus 73 -~~--------~~~~~~~~~~~~i~~~~~----------------------~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~ 121 (154)
.. +......|+..++..+.+ +++.++|.++|||+||..++..+.+. .+
T Consensus 173 ~~~~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r 251 (379)
T PF03403_consen 173 DPEEEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TR 251 (379)
T ss_dssp -GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cC
Confidence 00 011112223333333321 11234899999999999999988875 67
Q ss_pred ccEEEEeccCccc
Q 031716 122 ASAVLCLGYPLKV 134 (154)
Q Consensus 122 i~~~v~~~~p~~~ 134 (154)
+++.|++++.+.+
T Consensus 252 ~~~~I~LD~W~~P 264 (379)
T PF03403_consen 252 FKAGILLDPWMFP 264 (379)
T ss_dssp --EEEEES---TT
T ss_pred cceEEEeCCcccC
Confidence 8999989876643
No 114
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=98.90 E-value=2.5e-08 Score=84.56 Aligned_cols=99 Identities=13% Similarity=0.120 Sum_probs=73.3
Q ss_pred CCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhC-CCCeEE
Q 031716 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKF-PGHPLI 100 (154)
Q Consensus 22 ~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~i~ 100 (154)
+.++++++||++++.. .|..+...+..++.|+.++.+|++... ... ..++++++.+...++.. ...++.
T Consensus 1067 ~~~~l~~lh~~~g~~~-----~~~~l~~~l~~~~~v~~~~~~g~~~~~-~~~----~~l~~la~~~~~~i~~~~~~~p~~ 1136 (1296)
T PRK10252 1067 DGPTLFCFHPASGFAW-----QFSVLSRYLDPQWSIYGIQSPRPDGPM-QTA----TSLDEVCEAHLATLLEQQPHGPYH 1136 (1296)
T ss_pred CCCCeEEecCCCCchH-----HHHHHHHhcCCCCcEEEEECCCCCCCC-CCC----CCHHHHHHHHHHHHHhhCCCCCEE
Confidence 3467999999998763 477778777788999999999985321 112 24455555555555443 345899
Q ss_pred EEEeCcchHHHHHHHhh---cCccccEEEEecc
Q 031716 101 LAGKSMGSRVSCMVACK---EDIAASAVLCLGY 130 (154)
Q Consensus 101 l~G~S~Gg~~a~~~a~~---~~~~i~~~v~~~~ 130 (154)
++|||+||.++..++.+ .++++..++++++
T Consensus 1137 l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~ 1169 (1296)
T PRK10252 1137 LLGYSLGGTLAQGIAARLRARGEEVAFLGLLDT 1169 (1296)
T ss_pred EEEechhhHHHHHHHHHHHHcCCceeEEEEecC
Confidence 99999999999999986 4678888888875
No 115
>PRK10115 protease 2; Provisional
Probab=98.89 E-value=1.3e-08 Score=81.18 Aligned_cols=112 Identities=11% Similarity=-0.031 Sum_probs=78.5
Q ss_pred CCCCcEEEEecCCCCCCCch-HHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCC-C----chHHHHHHHHHHHHHHHHHh
Q 031716 20 TSSSPVVVFAHGAGAPSSSD-WMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKA-P----PKAEKLVEFHTDVVKGAVAK 93 (154)
Q Consensus 20 ~~~~~~il~lHG~~~~~~~~-~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~-~----~~~~~~~~~~~~~i~~~~~~ 93 (154)
.++.|+||+.||+.+..... |...+. .+ +.+|+.|+.+++||.++-.... . ..-....+|+.+.+++++++
T Consensus 442 ~~~~P~ll~~hGg~~~~~~p~f~~~~~-~l--~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~ 518 (686)
T PRK10115 442 KGHNPLLVYGYGSYGASIDADFSFSRL-SL--LDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKL 518 (686)
T ss_pred CCCCCEEEEEECCCCCCCCCCccHHHH-HH--HHCCcEEEEEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHc
Confidence 34569999999976655322 222222 23 2379999999999854211101 0 01123578888899998876
Q ss_pred C--CCCeEEEEEeCcchHHHHHHHhhcCccccEEEEeccCccc
Q 031716 94 F--PGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKV 134 (154)
Q Consensus 94 ~--~~~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~~~ 134 (154)
. +.+++.+.|.|+||+++..++.++|+.++++|+..+..+.
T Consensus 519 g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~ 561 (686)
T PRK10115 519 GYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDV 561 (686)
T ss_pred CCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhH
Confidence 3 5679999999999999999999999999999987655543
No 116
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=98.83 E-value=4.8e-08 Score=69.87 Aligned_cols=116 Identities=13% Similarity=0.054 Sum_probs=76.7
Q ss_pred CCCCCcEEEEecCCCCCCCchHHHH--HHH------HHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHH
Q 031716 19 DTSSSPVVVFAHGAGAPSSSDWMIK--WKD------MLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGA 90 (154)
Q Consensus 19 ~~~~~~~il~lHG~~~~~~~~~~~~--~~~------~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~ 90 (154)
.+++.|+||..|+++.+........ ... .+. .+||.|+..|.||.+.+............+|..+.|+++
T Consensus 16 ~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~--~~GY~vV~~D~RG~g~S~G~~~~~~~~e~~D~~d~I~W~ 93 (272)
T PF02129_consen 16 GGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFA--ERGYAVVVQDVRGTGGSEGEFDPMSPNEAQDGYDTIEWI 93 (272)
T ss_dssp TSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHH--HTT-EEEEEE-TTSTTS-S-B-TTSHHHHHHHHHHHHHH
T ss_pred CCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHH--hCCCEEEEECCcccccCCCccccCChhHHHHHHHHHHHH
Confidence 4567899999999996532111000 000 122 279999999999987544433332455778888889888
Q ss_pred HHh-CCCCeEEEEEeCcchHHHHHHHhhcCccccEEEEeccCccccc
Q 031716 91 VAK-FPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKVCY 136 (154)
Q Consensus 91 ~~~-~~~~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~~~~~ 136 (154)
.++ ....+|.++|.|++|..++.+|...|..+++++...+......
T Consensus 94 ~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 94 AAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp HHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTCC
T ss_pred HhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcccc
Confidence 876 2234899999999999999999987888999987766554433
No 117
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.79 E-value=7.1e-08 Score=63.53 Aligned_cols=95 Identities=15% Similarity=0.173 Sum_probs=68.0
Q ss_pred cEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeEEEEE
Q 031716 24 PVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAG 103 (154)
Q Consensus 24 ~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~G 103 (154)
+.+|++||++++... +|....+.-..+ +-.++...- .....+||.+.+...++.. .++++|++
T Consensus 3 ~~~lIVpG~~~Sg~~----HWq~~we~~l~~--a~rveq~~w----------~~P~~~dWi~~l~~~v~a~-~~~~vlVA 65 (181)
T COG3545 3 TDVLIVPGYGGSGPN----HWQSRWESALPN--ARRVEQDDW----------EAPVLDDWIARLEKEVNAA-EGPVVLVA 65 (181)
T ss_pred ceEEEecCCCCCChh----HHHHHHHhhCcc--chhcccCCC----------CCCCHHHHHHHHHHHHhcc-CCCeEEEE
Confidence 468999999988754 455555442122 333333321 1223688888888888876 45699999
Q ss_pred eCcchHHHHHHHhhcCccccEEEEeccCcccc
Q 031716 104 KSMGSRVSCMVACKEDIAASAVLCLGYPLKVC 135 (154)
Q Consensus 104 ~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~~~~ 135 (154)
||.|+..++.++.+....|.|++++++|....
T Consensus 66 HSLGc~~v~h~~~~~~~~V~GalLVAppd~~~ 97 (181)
T COG3545 66 HSLGCATVAHWAEHIQRQVAGALLVAPPDVSR 97 (181)
T ss_pred ecccHHHHHHHHHhhhhccceEEEecCCCccc
Confidence 99999999999998767899999999888655
No 118
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.78 E-value=1.1e-07 Score=73.50 Aligned_cols=110 Identities=11% Similarity=0.033 Sum_probs=75.1
Q ss_pred CCcEEEEecCCCCCCCchHH----HHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCC
Q 031716 22 SSPVVVFAHGAGAPSSSDWM----IKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGH 97 (154)
Q Consensus 22 ~~~~il~lHG~~~~~~~~~~----~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 97 (154)
.+.++|+++.+- +....+- ..+.+.+.. +|+.|+.+||+.-+ .....-+.+..++.+.++++.+.+..+.+
T Consensus 214 ~~~PLLIVPp~I-NK~YIlDL~P~~SlVr~lv~--qG~~VflIsW~nP~--~~~r~~~ldDYv~~i~~Ald~V~~~tG~~ 288 (560)
T TIGR01839 214 HARPLLVVPPQI-NKFYIFDLSPEKSFVQYCLK--NQLQVFIISWRNPD--KAHREWGLSTYVDALKEAVDAVRAITGSR 288 (560)
T ss_pred CCCcEEEechhh-hhhheeecCCcchHHHHHHH--cCCeEEEEeCCCCC--hhhcCCCHHHHHHHHHHHHHHHHHhcCCC
Confidence 346788998865 2211110 234555544 89999999998742 22112222333356666677777777888
Q ss_pred eEEEEEeCcchHHHHH----HHhhcCc-cccEEEEeccCccccc
Q 031716 98 PLILAGKSMGSRVSCM----VACKEDI-AASAVLCLGYPLKVCY 136 (154)
Q Consensus 98 ~i~l~G~S~Gg~~a~~----~a~~~~~-~i~~~v~~~~p~~~~~ 136 (154)
++.++|+|+||.++.. +++.+++ +|+.++++.+|++...
T Consensus 289 ~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~ 332 (560)
T TIGR01839 289 DLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTM 332 (560)
T ss_pred CeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCC
Confidence 9999999999999996 6777775 7999999999988653
No 119
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.77 E-value=3.7e-08 Score=71.85 Aligned_cols=97 Identities=11% Similarity=0.101 Sum_probs=74.5
Q ss_pred CcEEEEecCCCCCCCchHHHHHHHHHHhhc-C---------CeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHH
Q 031716 23 SPVVVFAHGAGAPSSSDWMIKWKDMLGKAL-D---------AVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVA 92 (154)
Q Consensus 23 ~~~il~lHG~~~~~~~~~~~~~~~~~~~l~-~---------~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~ 92 (154)
.-+++++||+.|+-. + |.+++.-|. + -+.|++|.+||+|.+...... .....+.+.+++.++-
T Consensus 152 v~PlLl~HGwPGsv~-E----FykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~--GFn~~a~ArvmrkLMl 224 (469)
T KOG2565|consen 152 VKPLLLLHGWPGSVR-E----FYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKT--GFNAAATARVMRKLML 224 (469)
T ss_pred ccceEEecCCCchHH-H----HHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccC--CccHHHHHHHHHHHHH
Confidence 346999999999873 3 444444333 2 289999999998755443323 2345678888999998
Q ss_pred hCCCCeEEEEEeCcchHHHHHHHhhcCccccEEE
Q 031716 93 KFPGHPLILAGKSMGSRVSCMVACKEDIAASAVL 126 (154)
Q Consensus 93 ~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v 126 (154)
+++.++.+|-|-.+|+.++..+|..+|+.|.|.=
T Consensus 225 RLg~nkffiqGgDwGSiI~snlasLyPenV~GlH 258 (469)
T KOG2565|consen 225 RLGYNKFFIQGGDWGSIIGSNLASLYPENVLGLH 258 (469)
T ss_pred HhCcceeEeecCchHHHHHHHHHhhcchhhhHhh
Confidence 8999999999999999999999999999887743
No 120
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=98.76 E-value=2e-07 Score=66.92 Aligned_cols=107 Identities=10% Similarity=0.055 Sum_probs=66.4
Q ss_pred CCcEEEEecCCCCCCC-chHHHHHHHHHHhhc-CCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhC----C
Q 031716 22 SSPVVVFAHGAGAPSS-SDWMIKWKDMLGKAL-DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKF----P 95 (154)
Q Consensus 22 ~~~~il~lHG~~~~~~-~~~~~~~~~~~~~l~-~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~ 95 (154)
....|||+.|.+.... .++ ...+.+.|. .+|.++-+.++..-.|- -....+..++|+.+.+++++... +
T Consensus 32 ~~~~llfIGGLtDGl~tvpY---~~~La~aL~~~~wsl~q~~LsSSy~G~--G~~SL~~D~~eI~~~v~ylr~~~~g~~~ 106 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPY---LPDLAEALEETGWSLFQVQLSSSYSGW--GTSSLDRDVEEIAQLVEYLRSEKGGHFG 106 (303)
T ss_dssp SSSEEEEE--TT--TT-STC---HHHHHHHHT-TT-EEEEE--GGGBTTS---S--HHHHHHHHHHHHHHHHHHS-----
T ss_pred CCcEEEEECCCCCCCCCCch---HHHHHHHhccCCeEEEEEEecCccCCc--CcchhhhHHHHHHHHHHHHHHhhccccC
Confidence 5668999999877654 233 344444444 69999999866310111 12234667899999999998873 5
Q ss_pred CCeEEEEEeCcchHHHHHHHhhc-----CccccEEEEeccCcc
Q 031716 96 GHPLILAGKSMGSRVSCMVACKE-----DIAASAVLCLGYPLK 133 (154)
Q Consensus 96 ~~~i~l~G~S~Gg~~a~~~a~~~-----~~~i~~~v~~~~p~~ 133 (154)
.++|+|+|||-|..-++.|+... ...|+++|+-+|.-+
T Consensus 107 ~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSD 149 (303)
T PF08538_consen 107 REKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSD 149 (303)
T ss_dssp -S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---
T ss_pred CccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCC
Confidence 67999999999999999999874 256999998876443
No 121
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=98.76 E-value=1.5e-07 Score=68.85 Aligned_cols=109 Identities=20% Similarity=0.125 Sum_probs=65.6
Q ss_pred CCCCCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCC-------------------Cch--HH
Q 031716 19 DTSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKA-------------------PPK--AE 77 (154)
Q Consensus 19 ~~~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~-------------------~~~--~~ 77 (154)
..++.|.||.+||.++... .+.+.+.....|+.++.+|.+|.+..+... .+. ..
T Consensus 79 ~~~~~Pavv~~hGyg~~~~-----~~~~~~~~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr 153 (320)
T PF05448_consen 79 AKGKLPAVVQFHGYGGRSG-----DPFDLLPWAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYR 153 (320)
T ss_dssp SSSSEEEEEEE--TT--GG-----GHHHHHHHHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHH
T ss_pred CCCCcCEEEEecCCCCCCC-----CcccccccccCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHH
Confidence 3556799999999998753 233333333379999999999976211000 011 22
Q ss_pred HHHHHHHHHHHHHHHh--CCCCeEEEEEeCcchHHHHHHHhhcCccccEEEEeccCcc
Q 031716 78 KLVEFHTDVVKGAVAK--FPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLK 133 (154)
Q Consensus 78 ~~~~~~~~~i~~~~~~--~~~~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~~ 133 (154)
....|....++.+... .+.++|.+.|.|+||.+++.++...+ +|++++..-|.+-
T Consensus 154 ~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l~ 210 (320)
T PF05448_consen 154 RVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFLC 210 (320)
T ss_dssp HHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESSS
T ss_pred HHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCcc
Confidence 2445556666666543 34569999999999999999999875 5888887655443
No 122
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.74 E-value=6.7e-08 Score=71.14 Aligned_cols=110 Identities=17% Similarity=0.144 Sum_probs=55.7
Q ss_pred CCCCcEEEEecCCCCCCCchH-----------------HHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCc------hH
Q 031716 20 TSSSPVVVFAHGAGAPSSSDW-----------------MIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPP------KA 76 (154)
Q Consensus 20 ~~~~~~il~lHG~~~~~~~~~-----------------~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~------~~ 76 (154)
.++.|.||++||.++... .. ...+...+.+ +||.|+++|.+++|........ ..
T Consensus 112 ~~p~PAVL~lHgHg~~Ke-~~~g~~gv~~~~~~~~~~~~~~~g~~LAk--~GYVvla~D~~g~GER~~~e~~~~~~~~~~ 188 (390)
T PF12715_consen 112 KGPFPAVLCLHGHGGGKE-KMAGEDGVSPDLKDDYDDPKQDYGDQLAK--RGYVVLAPDALGFGERGDMEGAAQGSNYDC 188 (390)
T ss_dssp -S-EEEEEEE--TT--HH-HHCT---SSGCG--STTSTTT-HHHHHHT--TTSEEEEE--TTSGGG-SSCCCTTTTS--H
T ss_pred CCCCCEEEEeCCCCCCcc-cccCCcccccccchhhccccccHHHHHHh--CCCEEEEEccccccccccccccccccchhH
Confidence 456799999999776541 10 0123444444 8999999999998743221100 00
Q ss_pred HHHHH---------------HHHHHHHHHHH--hCCCCeEEEEEeCcchHHHHHHHhhcCccccEEEEeccCcc
Q 031716 77 EKLVE---------------FHTDVVKGAVA--KFPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLK 133 (154)
Q Consensus 77 ~~~~~---------------~~~~~i~~~~~--~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~~ 133 (154)
..... +....++.+.. ..+.++|.++|+||||..++.++... ++|++.|..+....
T Consensus 189 ~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALD-dRIka~v~~~~l~~ 261 (390)
T PF12715_consen 189 QALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALD-DRIKATVANGYLCT 261 (390)
T ss_dssp HHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH--TT--EEEEES-B--
T ss_pred HHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcc-hhhHhHhhhhhhhc
Confidence 01000 01111222211 13456999999999999999999985 67888886665443
No 123
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.72 E-value=4.3e-07 Score=68.57 Aligned_cols=111 Identities=11% Similarity=0.033 Sum_probs=64.7
Q ss_pred CCCcEEEEecCCCCCCCchHHHHHHHHHHhhc-CCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHh-----C
Q 031716 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKAL-DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAK-----F 94 (154)
Q Consensus 21 ~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~-~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~-----~ 94 (154)
.+.|+|+++||............+..+++.-. +-..++.+|-..........+. .....+.+.+.+...+++ .
T Consensus 207 ~~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~-~~~f~~~l~~eLlP~I~~~y~~~~ 285 (411)
T PRK10439 207 EERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPC-NADFWLAVQQELLPQVRAIAPFSD 285 (411)
T ss_pred CCCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccccCCc-hHHHHHHHHHHHHHHHHHhCCCCC
Confidence 45799999999553222111112233332211 2356677775321111111111 122333444444444443 1
Q ss_pred CCCeEEEEEeCcchHHHHHHHhhcCccccEEEEeccCc
Q 031716 95 PGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPL 132 (154)
Q Consensus 95 ~~~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~ 132 (154)
+.++.+|+|+||||..|+.++.++|+.+.+++++++.+
T Consensus 286 d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 286 DADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred CccceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 34578999999999999999999999999999998754
No 124
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.71 E-value=8e-08 Score=74.11 Aligned_cols=112 Identities=17% Similarity=0.148 Sum_probs=65.1
Q ss_pred CCCCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCC-CC-CCCCC-CCCchHHHHHHHHHHHHHHH---HHh
Q 031716 20 TSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYP-YI-AGGKR-KAPPKAEKLVEFHTDVVKGA---VAK 93 (154)
Q Consensus 20 ~~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~-g~-g~~~~-~~~~~~~~~~~~~~~~i~~~---~~~ 93 (154)
.++.|++|++||++...++........+.... .++.|+.++|| |. |-... ...........|...+++++ ++.
T Consensus 92 ~~~~pv~v~ihGG~~~~g~~~~~~~~~~~~~~-~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~ 170 (493)
T cd00312 92 GNSLPVMVWIHGGGFMFGSGSLYPGDGLAREG-DNVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAA 170 (493)
T ss_pred CCCCCEEEEEcCCccccCCCCCCChHHHHhcC-CCEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHH
Confidence 34679999999976554422111233344331 14999999999 32 11110 00111122234444444444 444
Q ss_pred C--CCCeEEEEEeCcchHHHHHHHhh--cCccccEEEEeccCc
Q 031716 94 F--PGHPLILAGKSMGSRVSCMVACK--EDIAASAVLCLGYPL 132 (154)
Q Consensus 94 ~--~~~~i~l~G~S~Gg~~a~~~a~~--~~~~i~~~v~~~~p~ 132 (154)
. +.++|.|+|+|.||..+..++.. .+..++++|+.+...
T Consensus 171 fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~ 213 (493)
T cd00312 171 FGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSA 213 (493)
T ss_pred hCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCc
Confidence 4 45699999999999999888775 234578888776543
No 125
>PRK04940 hypothetical protein; Provisional
Probab=98.70 E-value=2.9e-07 Score=61.48 Aligned_cols=95 Identities=11% Similarity=0.058 Sum_probs=53.6
Q ss_pred EEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeEEEEEeC
Q 031716 26 VVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKS 105 (154)
Q Consensus 26 il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~G~S 105 (154)
||++||+.++..+...+ .+.+..+..+.+++ +++. ......++.+.+.+..+......+++.|+|.|
T Consensus 2 IlYlHGF~SS~~S~~~K--a~~l~~~~p~~~~~--~l~~---------~~P~~a~~~l~~~i~~~~~~~~~~~~~liGSS 68 (180)
T PRK04940 2 IIYLHGFDSTSPGNHEK--VLQLQFIDPDVRLI--SYST---------LHPKHDMQHLLKEVDKMLQLSDDERPLICGVG 68 (180)
T ss_pred EEEeCCCCCCCCccHHH--HHhheeeCCCCeEE--ECCC---------CCHHHHHHHHHHHHHHhhhccCCCCcEEEEeC
Confidence 79999999988641100 11111111233333 3321 11122233344444433332112479999999
Q ss_pred cchHHHHHHHhhcCccccEEEEeccCccccc
Q 031716 106 MGSRVSCMVACKEDIAASAVLCLGYPLKVCY 136 (154)
Q Consensus 106 ~Gg~~a~~~a~~~~~~i~~~v~~~~p~~~~~ 136 (154)
+||+.|..++.++. ++ +|+++|.+.+..
T Consensus 69 LGGyyA~~La~~~g--~~-aVLiNPAv~P~~ 96 (180)
T PRK04940 69 LGGYWAERIGFLCG--IR-QVIFNPNLFPEE 96 (180)
T ss_pred hHHHHHHHHHHHHC--CC-EEEECCCCChHH
Confidence 99999999999975 33 677888887644
No 126
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=98.69 E-value=5.8e-08 Score=56.54 Aligned_cols=63 Identities=16% Similarity=0.160 Sum_probs=41.4
Q ss_pred CCcEEEEecCCCCCCCchHHHHHHHHHHhhc-CCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHH
Q 031716 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKAL-DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAV 91 (154)
Q Consensus 22 ~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~-~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (154)
.+.+|+++||.+..++ .|..+.+.|. +||.|+++|+||||.+.. ........+++.+++..++
T Consensus 15 ~k~~v~i~HG~~eh~~-----ry~~~a~~L~~~G~~V~~~D~rGhG~S~g--~rg~~~~~~~~v~D~~~~~ 78 (79)
T PF12146_consen 15 PKAVVVIVHGFGEHSG-----RYAHLAEFLAEQGYAVFAYDHRGHGRSEG--KRGHIDSFDDYVDDLHQFI 78 (79)
T ss_pred CCEEEEEeCCcHHHHH-----HHHHHHHHHHhCCCEEEEECCCcCCCCCC--cccccCCHHHHHHHHHHHh
Confidence 5889999999987764 3555555554 899999999999975432 1222233455555555443
No 127
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.68 E-value=2.3e-07 Score=65.91 Aligned_cols=110 Identities=22% Similarity=0.286 Sum_probs=76.5
Q ss_pred CCCcEEEEecCCCCCCC-chHHHHHHHHHHhhcCCeEEEEEcC-CCC----CCCCCCCCc---hHHHHHHHHHHHHHHHH
Q 031716 21 SSSPVVVFAHGAGAPSS-SDWMIKWKDMLGKALDAVEVVTFDY-PYI----AGGKRKAPP---KAEKLVEFHTDVVKGAV 91 (154)
Q Consensus 21 ~~~~~il~lHG~~~~~~-~~~~~~~~~~~~~l~~~~~v~~~d~-~g~----g~~~~~~~~---~~~~~~~~~~~~i~~~~ 91 (154)
++.|.+|++||.+++.. ......|.++.+. +++-|+.||- +.+ +.+....+. .....+..+.+.+..++
T Consensus 59 ~~apLvv~LHG~~~sgag~~~~sg~d~lAd~--~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~~g~ddVgflr~lva~l~ 136 (312)
T COG3509 59 SGAPLVVVLHGSGGSGAGQLHGTGWDALADR--EGFLVAYPDGYDRAWNANGCGNWFGPADRRRGVDDVGFLRALVAKLV 136 (312)
T ss_pred CCCCEEEEEecCCCChHHhhcccchhhhhcc--cCcEEECcCccccccCCCcccccCCcccccCCccHHHHHHHHHHHHH
Confidence 34589999999888764 1122257777777 8999999962 211 111110011 12334566777777777
Q ss_pred HhCCCC--eEEEEEeCcchHHHHHHHhhcCccccEEEEeccCc
Q 031716 92 AKFPGH--PLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPL 132 (154)
Q Consensus 92 ~~~~~~--~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~ 132 (154)
.+...+ +|++.|-|.||.++..++..+|+.+.++..++...
T Consensus 137 ~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 137 NEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred HhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 776554 99999999999999999999999999888776655
No 128
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.64 E-value=5.7e-07 Score=65.24 Aligned_cols=95 Identities=19% Similarity=0.226 Sum_probs=71.8
Q ss_pred CCCCcEEEEecCCCCCCCchHH-----HHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhC
Q 031716 20 TSSSPVVVFAHGAGAPSSSDWM-----IKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKF 94 (154)
Q Consensus 20 ~~~~~~il~lHG~~~~~~~~~~-----~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 94 (154)
..+...||+.-|.+.......+ ..|.++... .+.+|+.++|||.|.+.... . ....+.+....++++.++.
T Consensus 134 a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~--~~aNvl~fNYpGVg~S~G~~-s-~~dLv~~~~a~v~yL~d~~ 209 (365)
T PF05677_consen 134 AKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKE--LGANVLVFNYPGVGSSTGPP-S-RKDLVKDYQACVRYLRDEE 209 (365)
T ss_pred CCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHH--cCCcEEEECCCccccCCCCC-C-HHHHHHHHHHHHHHHHhcc
Confidence 4566789999998876643211 246666666 68999999999987555433 3 4778888888999998754
Q ss_pred ---CCCeEEEEEeCcchHHHHHHHhhc
Q 031716 95 ---PGHPLILAGKSMGSRVSCMVACKE 118 (154)
Q Consensus 95 ---~~~~i~l~G~S~Gg~~a~~~a~~~ 118 (154)
+.+.|++.|||.||.++..++.++
T Consensus 210 ~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 210 QGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred cCCChheEEEeeccccHHHHHHHHHhc
Confidence 346899999999999999877764
No 129
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.63 E-value=7.2e-08 Score=67.93 Aligned_cols=35 Identities=26% Similarity=0.265 Sum_probs=32.2
Q ss_pred EEEEEeCcchHHHHHHHhhcCccccEEEEeccCcc
Q 031716 99 LILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLK 133 (154)
Q Consensus 99 i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~~ 133 (154)
..|+|+||||..|+.++.++|+.+.+++++++.+.
T Consensus 117 ~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~ 151 (251)
T PF00756_consen 117 RAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALD 151 (251)
T ss_dssp EEEEEETHHHHHHHHHHHHSTTTESEEEEESEESE
T ss_pred eEEeccCCCcHHHHHHHHhCccccccccccCcccc
Confidence 79999999999999999999999999999996533
No 130
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.63 E-value=8.1e-08 Score=67.42 Aligned_cols=106 Identities=21% Similarity=0.214 Sum_probs=73.7
Q ss_pred CCCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCC---CCc-----------------h--HHH
Q 031716 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRK---APP-----------------K--AEK 78 (154)
Q Consensus 21 ~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~---~~~-----------------~--~~~ 78 (154)
+..|.||-.||.+++.+ .|.+.+.-...||.|+..|.||.|.++.. .+. . +..
T Consensus 81 ~~~P~vV~fhGY~g~~g-----~~~~~l~wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~ 155 (321)
T COG3458 81 GKLPAVVQFHGYGGRGG-----EWHDMLHWAVAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRG 155 (321)
T ss_pred CccceEEEEeeccCCCC-----CccccccccccceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEee
Confidence 67799999999999876 35555554458999999999998643210 000 0 122
Q ss_pred HHHHHHHHHHHHHH--hCCCCeEEEEEeCcchHHHHHHHhhcCccccEEEEeccCc
Q 031716 79 LVEFHTDVVKGAVA--KFPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPL 132 (154)
Q Consensus 79 ~~~~~~~~i~~~~~--~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~ 132 (154)
...|....+..+.. ....++|.+.|.|+||.+++..+...| +|+++++.-|-+
T Consensus 156 v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pfl 210 (321)
T COG3458 156 VFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPFL 210 (321)
T ss_pred ehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhccccccccc
Confidence 44455555555543 345679999999999999999999764 588887654433
No 131
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.62 E-value=5.8e-07 Score=68.42 Aligned_cols=112 Identities=15% Similarity=0.222 Sum_probs=70.0
Q ss_pred CCcEEEEecCCCCCCCchHH--HHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCC--------chHHHHHHHHHHHHHHHH
Q 031716 22 SSPVVVFAHGAGAPSSSDWM--IKWKDMLGKALDAVEVVTFDYPYIAGGKRKAP--------PKAEKLVEFHTDVVKGAV 91 (154)
Q Consensus 22 ~~~~il~lHG~~~~~~~~~~--~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~--------~~~~~~~~~~~~~i~~~~ 91 (154)
+.|++|++-|-+. ....+. ..+.++.++ -+-.++..++|.+|.+.+... -..+..++|++..++.+.
T Consensus 28 ~gpifl~~ggE~~-~~~~~~~~~~~~~lA~~--~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~ 104 (434)
T PF05577_consen 28 GGPIFLYIGGEGP-IEPFWINNGFMWELAKE--FGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVK 104 (434)
T ss_dssp TSEEEEEE--SS--HHHHHHH-HHHHHHHHH--HTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCc-cchhhhcCChHHHHHHH--cCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHH
Confidence 4777777766443 212221 123444444 489999999999875443211 124556778888888877
Q ss_pred HhC---CCCeEEEEEeCcchHHHHHHHhhcCccccEEEEeccCccccc
Q 031716 92 AKF---PGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKVCY 136 (154)
Q Consensus 92 ~~~---~~~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~~~~~ 136 (154)
.+. +..|++++|-|+||.+|.++-.+||+.+.+.+..+.|+....
T Consensus 105 ~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~a~~ 152 (434)
T PF05577_consen 105 KKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQAKV 152 (434)
T ss_dssp HHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CCHCC
T ss_pred HhhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceeeeec
Confidence 654 345899999999999999999999999999999999887654
No 132
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.61 E-value=4.1e-07 Score=64.78 Aligned_cols=103 Identities=21% Similarity=0.136 Sum_probs=65.6
Q ss_pred CcEEEEecCCCCCCCchHHHHHHHHHHhhc--------CCeEEEEEcCCC-CCCCCCCCCchHHHHHHHHHHHHH-HHHH
Q 031716 23 SPVVVFAHGAGAPSSSDWMIKWKDMLGKAL--------DAVEVVTFDYPY-IAGGKRKAPPKAEKLVEFHTDVVK-GAVA 92 (154)
Q Consensus 23 ~~~il~lHG~~~~~~~~~~~~~~~~~~~l~--------~~~~v~~~d~~g-~g~~~~~~~~~~~~~~~~~~~~i~-~~~~ 92 (154)
-|.+||+||.|.... +- ...+...+. -+|-|++|.|-- +-...+ +......+..+.+. .+.+
T Consensus 191 ~PLvlfLHgagq~g~-dn---~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~----~t~~~l~~~idli~~vlas 262 (387)
T COG4099 191 YPLVLFLHGAGQGGS-DN---DKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEE----KTLLYLIEKIDLILEVLAS 262 (387)
T ss_pred ccEEEEEecCCCCCc-hh---hhhhhcCccceeeecccCceEEEccccccccccccc----ccchhHHHHHHHHHHHHhh
Confidence 399999999887663 22 222222211 235677777532 111111 12223445555555 3334
Q ss_pred hC--CCCeEEEEEeCcchHHHHHHHhhcCccccEEEEeccCcc
Q 031716 93 KF--PGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLK 133 (154)
Q Consensus 93 ~~--~~~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~~ 133 (154)
+. +..+|.+.|.|+||+.++.++.++|+.+++++.++.-..
T Consensus 263 ~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d 305 (387)
T COG4099 263 TYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGD 305 (387)
T ss_pred ccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCCc
Confidence 44 455999999999999999999999999999998876544
No 133
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.60 E-value=2.7e-07 Score=68.01 Aligned_cols=106 Identities=20% Similarity=0.113 Sum_probs=73.8
Q ss_pred CcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeE---EEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeE
Q 031716 23 SPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVE---VVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPL 99 (154)
Q Consensus 23 ~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~---v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i 99 (154)
.-+++++||.+.+.+ .+. .....+.. .++. +..+++++. .. ........+.+...+.......+..++
T Consensus 59 ~~pivlVhG~~~~~~-~~~-~~~~~~~~--~g~~~~~~~~~~~~~~---~~--~~~~~~~~~ql~~~V~~~l~~~ga~~v 129 (336)
T COG1075 59 KEPIVLVHGLGGGYG-NFL-PLDYRLAI--LGWLTNGVYAFELSGG---DG--TYSLAVRGEQLFAYVDEVLAKTGAKKV 129 (336)
T ss_pred CceEEEEccCcCCcc-hhh-hhhhhhcc--hHHHhccccccccccc---CC--CccccccHHHHHHHHHHHHhhcCCCce
Confidence 447999999866553 221 22222333 3554 888888763 11 111233456667777777777777899
Q ss_pred EEEEeCcchHHHHHHHhhcC--ccccEEEEeccCccccch
Q 031716 100 ILAGKSMGSRVSCMVACKED--IAASAVLCLGYPLKVCYY 137 (154)
Q Consensus 100 ~l~G~S~Gg~~a~~~a~~~~--~~i~~~v~~~~p~~~~~~ 137 (154)
.|+||||||..+..++...+ .+++.++.+++|..+...
T Consensus 130 ~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~Gt~~ 169 (336)
T COG1075 130 NLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPHHGTEL 169 (336)
T ss_pred EEEeecccchhhHHHHhhcCccceEEEEEEeccCCCCchh
Confidence 99999999999998888877 789999999999877643
No 134
>PLN02633 palmitoyl protein thioesterase family protein
Probab=98.55 E-value=2.3e-06 Score=61.52 Aligned_cols=113 Identities=16% Similarity=0.085 Sum_probs=78.1
Q ss_pred CCCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeEE
Q 031716 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLI 100 (154)
Q Consensus 21 ~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~ 100 (154)
....++|+.||.|.+-..+.+..+.++++.+ .|..+.++.. |-+ ............++...+.+.. ...+.. -+.
T Consensus 23 ~~~~P~ViwHG~GD~c~~~g~~~~~~l~~~~-~g~~~~~i~i-g~~-~~~s~~~~~~~Qve~vce~l~~-~~~l~~-G~n 97 (314)
T PLN02633 23 SVSVPFIMLHGIGTQCSDATNANFTQLLTNL-SGSPGFCLEI-GNG-VGDSWLMPLTQQAEIACEKVKQ-MKELSQ-GYN 97 (314)
T ss_pred cCCCCeEEecCCCcccCCchHHHHHHHHHhC-CCCceEEEEE-CCC-ccccceeCHHHHHHHHHHHHhh-chhhhC-cEE
Confidence 3445689999999887666666788888664 4555555543 211 1222333445566666666666 333442 599
Q ss_pred EEEeCcchHHHHHHHhhcCc--cccEEEEeccCccccchh
Q 031716 101 LAGKSMGSRVSCMVACKEDI--AASAVLCLGYPLKVCYYL 138 (154)
Q Consensus 101 l~G~S~Gg~~a~~~a~~~~~--~i~~~v~~~~p~~~~~~~ 138 (154)
++|+|+||.++-.++++.++ .++.+|.+++|..+...+
T Consensus 98 aIGfSQGGlflRa~ierc~~~p~V~nlISlggph~Gv~g~ 137 (314)
T PLN02633 98 IVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPHAGISSL 137 (314)
T ss_pred EEEEccchHHHHHHHHHCCCCCCcceEEEecCCCCCeeCC
Confidence 99999999999999999765 599999999999887654
No 135
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=98.55 E-value=4.9e-07 Score=70.14 Aligned_cols=107 Identities=18% Similarity=0.112 Sum_probs=61.9
Q ss_pred CCcEEEEecCCCCCCCch--HHHHHHHHHHhhcCCeEEEEEcCC----CCCCCCCCCCchHHHHHHHHHHHHHHHHH---
Q 031716 22 SSPVVVFAHGAGAPSSSD--WMIKWKDMLGKALDAVEVVTFDYP----YIAGGKRKAPPKAEKLVEFHTDVVKGAVA--- 92 (154)
Q Consensus 22 ~~~~il~lHG~~~~~~~~--~~~~~~~~~~~l~~~~~v~~~d~~----g~g~~~~~~~~~~~~~~~~~~~~i~~~~~--- 92 (154)
..|++|++||++-..++. ....-..++.. ++..|+.++|| |+-.......+....-+.|...+++++.+
T Consensus 124 ~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~--~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~ 201 (535)
T PF00135_consen 124 KLPVMVWIHGGGFMFGSGSFPPYDGASLAAS--KDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKWVQDNIA 201 (535)
T ss_dssp SEEEEEEE--STTTSSCTTSGGGHTHHHHHH--HTSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHGG
T ss_pred ccceEEEeecccccCCCcccccccccccccC--CCEEEEEecccccccccccccccccCchhhhhhhhHHHHHHHHhhhh
Confidence 579999999977666543 11122333433 69999999999 22111111111123445566556555554
Q ss_pred hCC--CCeEEEEEeCcchHHHHHHHhh--cCccccEEEEecc
Q 031716 93 KFP--GHPLILAGKSMGSRVSCMVACK--EDIAASAVLCLGY 130 (154)
Q Consensus 93 ~~~--~~~i~l~G~S~Gg~~a~~~a~~--~~~~i~~~v~~~~ 130 (154)
..+ .++|.|+|+|.||..+...+.. ....++++|+.+.
T Consensus 202 ~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SG 243 (535)
T PF00135_consen 202 AFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSG 243 (535)
T ss_dssp GGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES-
T ss_pred hcccCCcceeeeeecccccccceeeecccccccccccccccc
Confidence 444 4589999999999988766654 2357999998876
No 136
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=98.54 E-value=8.2e-07 Score=66.70 Aligned_cols=88 Identities=14% Similarity=0.203 Sum_probs=59.8
Q ss_pred HHHHHHhhc-CCe----EEE--EEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCcchHHHHHHHh
Q 031716 44 WKDMLGKAL-DAV----EVV--TFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVAC 116 (154)
Q Consensus 44 ~~~~~~~l~-~~~----~v~--~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~ 116 (154)
|..+++.|. .|| .+. -+|||-. +...+.....+.+.|+...+.. ..|++|+||||||.++..+..
T Consensus 67 ~~~li~~L~~~GY~~~~~l~~~pYDWR~~-------~~~~~~~~~~lk~~ie~~~~~~-~~kv~li~HSmGgl~~~~fl~ 138 (389)
T PF02450_consen 67 FAKLIENLEKLGYDRGKDLFAAPYDWRLS-------PAERDEYFTKLKQLIEEAYKKN-GKKVVLIAHSMGGLVARYFLQ 138 (389)
T ss_pred HHHHHHHHHhcCcccCCEEEEEeechhhc-------hhhHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCchHHHHHHH
Confidence 566666654 343 222 2688752 1122334455666666666655 679999999999999999988
Q ss_pred hcCc------cccEEEEeccCccccchhh
Q 031716 117 KEDI------AASAVLCLGYPLKVCYYLC 139 (154)
Q Consensus 117 ~~~~------~i~~~v~~~~p~~~~~~~~ 139 (154)
..+. .|+++|.+++|+.+....+
T Consensus 139 ~~~~~~W~~~~i~~~i~i~~p~~Gs~~a~ 167 (389)
T PF02450_consen 139 WMPQEEWKDKYIKRFISIGTPFGGSPKAL 167 (389)
T ss_pred hccchhhHHhhhhEEEEeCCCCCCChHHH
Confidence 7532 5999999999998775443
No 137
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=98.52 E-value=4.7e-07 Score=61.31 Aligned_cols=105 Identities=14% Similarity=0.103 Sum_probs=68.5
Q ss_pred CCCCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCC-CCe
Q 031716 20 TSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFP-GHP 98 (154)
Q Consensus 20 ~~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~ 98 (154)
....++.||+||+=+..+..-. -..-.-..+..||+|..++|-..- ........+.+...-++.+++..+ .++
T Consensus 64 ~~~~klfIfIHGGYW~~g~rk~-clsiv~~a~~~gY~vasvgY~l~~-----q~htL~qt~~~~~~gv~filk~~~n~k~ 137 (270)
T KOG4627|consen 64 TNQAKLFIFIHGGYWQEGDRKM-CLSIVGPAVRRGYRVASVGYNLCP-----QVHTLEQTMTQFTHGVNFILKYTENTKV 137 (270)
T ss_pred CCCccEEEEEecchhhcCchhc-ccchhhhhhhcCeEEEEeccCcCc-----ccccHHHHHHHHHHHHHHHHHhccccee
Confidence 4567899999995544432111 122222223379999999886531 122345567777777777777654 456
Q ss_pred EEEEEeCcchHHHHHHHhh-cCccccEEEEecc
Q 031716 99 LILAGKSMGSRVSCMVACK-EDIAASAVLCLGY 130 (154)
Q Consensus 99 i~l~G~S~Gg~~a~~~a~~-~~~~i~~~v~~~~ 130 (154)
+.+.|||.|+.++..+..+ +..+|.++++++.
T Consensus 138 l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~G 170 (270)
T KOG4627|consen 138 LTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCG 170 (270)
T ss_pred EEEcccchHHHHHHHHHHHhcCchHHHHHHHhh
Confidence 7788999999999988876 4446777776643
No 138
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.50 E-value=1.9e-06 Score=60.06 Aligned_cols=106 Identities=16% Similarity=0.195 Sum_probs=68.7
Q ss_pred CcEEEEecCCCCCCCchHHHHHHHHHHhhcCCe------EEEEEcCCCCC--CC--CCC--CC----------chHHHHH
Q 031716 23 SPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAV------EVVTFDYPYIA--GG--KRK--AP----------PKAEKLV 80 (154)
Q Consensus 23 ~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~------~v~~~d~~g~g--~~--~~~--~~----------~~~~~~~ 80 (154)
.-+.||+||.+|+.. .+..++.++.+.+ -++.+|--|.- .| +.. .| .......
T Consensus 45 ~iPTIfIhGsgG~as-----S~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s 119 (288)
T COG4814 45 AIPTIFIHGSGGTAS-----SLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQS 119 (288)
T ss_pred ccceEEEecCCCChh-----HHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHH
Confidence 456899999999885 4666666665444 23334432210 00 000 00 1122223
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEEeCcchHHHHHHHhhcCc-----cccEEEEeccCcc
Q 031716 81 EFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDI-----AASAVLCLGYPLK 133 (154)
Q Consensus 81 ~~~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~-----~i~~~v~~~~p~~ 133 (154)
..+..++.++.++++..++.++||||||.-...++..+.+ .+...|.++.|+.
T Consensus 120 ~wlk~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 120 KWLKKAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 4455566777788899999999999999999999887543 4788999998887
No 139
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.50 E-value=6.7e-07 Score=64.99 Aligned_cols=98 Identities=20% Similarity=0.145 Sum_probs=65.0
Q ss_pred CCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCC-CCchHHHHHHHHHHHHHHHHHhC--CCCe
Q 031716 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRK-APPKAEKLVEFHTDVVKGAVAKF--PGHP 98 (154)
Q Consensus 22 ~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~-~~~~~~~~~~~~~~~i~~~~~~~--~~~~ 98 (154)
....||++-|..+-.. ..-+...+..+|.|+.+++||++++..- .+.+....++ .+++..+..+ +.+.
T Consensus 242 gq~LvIC~EGNAGFYE------vG~m~tP~~lgYsvLGwNhPGFagSTG~P~p~n~~nA~D---aVvQfAI~~Lgf~~ed 312 (517)
T KOG1553|consen 242 GQDLVICFEGNAGFYE------VGVMNTPAQLGYSVLGWNHPGFAGSTGLPYPVNTLNAAD---AVVQFAIQVLGFRQED 312 (517)
T ss_pred CceEEEEecCCccceE------eeeecChHHhCceeeccCCCCccccCCCCCcccchHHHH---HHHHHHHHHcCCCccc
Confidence 4567888888765332 1222333446999999999999543332 2222222233 3344445443 5568
Q ss_pred EEEEEeCcchHHHHHHHhhcCccccEEEEec
Q 031716 99 LILAGKSMGSRVSCMVACKEDIAASAVLCLG 129 (154)
Q Consensus 99 i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~ 129 (154)
|+|.|||.||..+.++|..||+ ++++|+-+
T Consensus 313 IilygWSIGGF~~~waAs~YPd-VkavvLDA 342 (517)
T KOG1553|consen 313 IILYGWSIGGFPVAWAASNYPD-VKAVVLDA 342 (517)
T ss_pred eEEEEeecCCchHHHHhhcCCC-ceEEEeec
Confidence 9999999999999999999998 88888643
No 140
>COG3150 Predicted esterase [General function prediction only]
Probab=98.49 E-value=2.3e-06 Score=56.09 Aligned_cols=92 Identities=12% Similarity=0.199 Sum_probs=56.5
Q ss_pred EEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeEEEEEeC
Q 031716 26 VVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKS 105 (154)
Q Consensus 26 il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~G~S 105 (154)
||++||+.++.++.-.....+.+..........++.+| . ..+..++.+..++.+.+...+.|+|-|
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~~~~~i~y~~p~l~----------h----~p~~a~~ele~~i~~~~~~~p~ivGss 67 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDEDVRDIEYSTPHLP----------H----DPQQALKELEKAVQELGDESPLIVGSS 67 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhccccceeeecCCCC----------C----CHHHHHHHHHHHHHHcCCCCceEEeec
Confidence 89999999988754333233333332122222222222 1 235555666667766666679999999
Q ss_pred cchHHHHHHHhhcCccccEEEEeccCccc
Q 031716 106 MGSRVSCMVACKEDIAASAVLCLGYPLKV 134 (154)
Q Consensus 106 ~Gg~~a~~~a~~~~~~i~~~v~~~~p~~~ 134 (154)
.||+.|.+++.+.. +. .|+++|.+.+
T Consensus 68 LGGY~At~l~~~~G--ir-av~~NPav~P 93 (191)
T COG3150 68 LGGYYATWLGFLCG--IR-AVVFNPAVRP 93 (191)
T ss_pred chHHHHHHHHHHhC--Ch-hhhcCCCcCc
Confidence 99999999999865 33 3445665544
No 141
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.48 E-value=1.8e-06 Score=59.55 Aligned_cols=92 Identities=20% Similarity=0.284 Sum_probs=59.3
Q ss_pred CCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCc-----hHHHHHHHHHHHHHHHHHhCCC
Q 031716 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPP-----KAEKLVEFHTDVVKGAVAKFPG 96 (154)
Q Consensus 22 ~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~-----~~~~~~~~~~~~i~~~~~~~~~ 96 (154)
+.+-.+++-|..+-. ..+...++..... .||.|+.+||||.|.++..... -.+....|+..+++.+.+..+.
T Consensus 28 ~~~g~~~va~a~Gv~-~~fYRrfA~~a~~--~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~~ 104 (281)
T COG4757 28 KASGRLVVAGATGVG-QYFYRRFAAAAAK--AGFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDFPAALAALKKALPG 104 (281)
T ss_pred CCCCcEEecccCCcc-hhHhHHHHHHhhc--cCceEEEEecccccCCCccccccCccchhhhhhcchHHHHHHHHhhCCC
Confidence 334345555555544 2232234444443 8999999999998644332211 2344556777788888887788
Q ss_pred CeEEEEEeCcchHHHHHHHh
Q 031716 97 HPLILAGKSMGSRVSCMVAC 116 (154)
Q Consensus 97 ~~i~l~G~S~Gg~~a~~~a~ 116 (154)
.+...+|||+||.+.-.+..
T Consensus 105 ~P~y~vgHS~GGqa~gL~~~ 124 (281)
T COG4757 105 HPLYFVGHSFGGQALGLLGQ 124 (281)
T ss_pred CceEEeeccccceeeccccc
Confidence 89999999999987665554
No 142
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.48 E-value=3.6e-06 Score=57.06 Aligned_cols=106 Identities=20% Similarity=0.330 Sum_probs=68.4
Q ss_pred CcEEEEecCCCCCCCchHHHHHHHHHHhhc-CCeEEEEEcCCCCC----CC--CC---------CCCchHHHHHHHHHHH
Q 031716 23 SPVVVFAHGAGAPSSSDWMIKWKDMLGKAL-DAVEVVTFDYPYIA----GG--KR---------KAPPKAEKLVEFHTDV 86 (154)
Q Consensus 23 ~~~il~lHG~~~~~~~~~~~~~~~~~~~l~-~~~~v~~~d~~g~g----~~--~~---------~~~~~~~~~~~~~~~~ 86 (154)
+..||++||.|.+.. .|.++++.+. ++..-++|.-|..- .| .. .............++.
T Consensus 3 ~atIi~LHglGDsg~-----~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~ 77 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGS-----GWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADN 77 (206)
T ss_pred eEEEEEEecCCCCCc-----cHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHH
Confidence 457999999998874 4666776666 78888888654210 00 00 0000112223334444
Q ss_pred HHHHHHh-----CCCCeEEEEEeCcchHHHHHHHhhcCccccEEEEeccCcc
Q 031716 87 VKGAVAK-----FPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLK 133 (154)
Q Consensus 87 i~~~~~~-----~~~~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~~ 133 (154)
+..++++ .+.++|.+.|+|+||.+++..+..++..+.+++..++-++
T Consensus 78 i~~Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p 129 (206)
T KOG2112|consen 78 IANLIDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLP 129 (206)
T ss_pred HHHHHHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccc
Confidence 4444443 3556899999999999999999999888888886655444
No 143
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.46 E-value=2.9e-06 Score=57.03 Aligned_cols=101 Identities=21% Similarity=0.223 Sum_probs=72.1
Q ss_pred cEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeEEEEE
Q 031716 24 PVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAG 103 (154)
Q Consensus 24 ~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~G 103 (154)
..+|++.|-|+= .++-+..++.+.+ +|+.|+.+|-+-+=...+. ......|+.+.++...++.+.++++|+|
T Consensus 3 t~~v~~SGDgGw--~~~d~~~a~~l~~--~G~~VvGvdsl~Yfw~~rt----P~~~a~Dl~~~i~~y~~~w~~~~vvLiG 74 (192)
T PF06057_consen 3 TLAVFFSGDGGW--RDLDKQIAEALAK--QGVPVVGVDSLRYFWSERT----PEQTAADLARIIRHYRARWGRKRVVLIG 74 (192)
T ss_pred EEEEEEeCCCCc--hhhhHHHHHHHHH--CCCeEEEechHHHHhhhCC----HHHHHHHHHHHHHHHHHHhCCceEEEEe
Confidence 457888885552 3333456666666 8999999995432122221 2445678888888888888999999999
Q ss_pred eCcchHHHHHHHhhcC----ccccEEEEeccCc
Q 031716 104 KSMGSRVSCMVACKED----IAASAVLCLGYPL 132 (154)
Q Consensus 104 ~S~Gg~~a~~~a~~~~----~~i~~~v~~~~p~ 132 (154)
.|+|+-+......+.| ++|..++++++..
T Consensus 75 YSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~ 107 (192)
T PF06057_consen 75 YSFGADVLPFIYNRLPAALRARVAQVVLLSPST 107 (192)
T ss_pred ecCCchhHHHHHhhCCHHHHhheeEEEEeccCC
Confidence 9999988877776654 4788899987644
No 144
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=98.45 E-value=7.1e-07 Score=67.53 Aligned_cols=113 Identities=16% Similarity=0.136 Sum_probs=65.4
Q ss_pred CCCCCcEEEEecCCCCCCCchHH--HHHHHHHHhhcCCeEEEEEcCCC----CCCCCCCC---CchHHHHHHHHHHH---
Q 031716 19 DTSSSPVVVFAHGAGAPSSSDWM--IKWKDMLGKALDAVEVVTFDYPY----IAGGKRKA---PPKAEKLVEFHTDV--- 86 (154)
Q Consensus 19 ~~~~~~~il~lHG~~~~~~~~~~--~~~~~~~~~l~~~~~v~~~d~~g----~g~~~~~~---~~~~~~~~~~~~~~--- 86 (154)
...+.|++|++||++...++... ..-..+.++ .++.|+.+|||- +-..+... ......-..|.+.+
T Consensus 90 ~a~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~--g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~DqilALkW 167 (491)
T COG2272 90 PAEKLPVMVYIHGGGYIMGSGSEPLYDGSALAAR--GDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLLDQILALKW 167 (491)
T ss_pred CCCCCcEEEEEeccccccCCCcccccChHHHHhc--CCEEEEEeCcccccceeeehhhccccccccccccHHHHHHHHHH
Confidence 34567999999997665553221 123334433 449999999982 21111100 00011233444444
Q ss_pred HHHHHHhCC--CCeEEEEEeCcchHHHHHHHhh--cCccccEEEEeccCcc
Q 031716 87 VKGAVAKFP--GHPLILAGKSMGSRVSCMVACK--EDIAASAVLCLGYPLK 133 (154)
Q Consensus 87 i~~~~~~~~--~~~i~l~G~S~Gg~~a~~~a~~--~~~~i~~~v~~~~p~~ 133 (154)
+++.+++.+ .++|.|+|+|.||+.++.+... ....++++|+.+++..
T Consensus 168 V~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 168 VRDNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 444555554 4589999999999998877765 1224666777766553
No 145
>PLN02606 palmitoyl-protein thioesterase
Probab=98.43 E-value=9.4e-06 Score=58.40 Aligned_cols=111 Identities=14% Similarity=0.069 Sum_probs=72.5
Q ss_pred CcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCC-CCCCchHHHHHHHHHHHHHHHHHhCCCCeEEE
Q 031716 23 SPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGK-RKAPPKAEKLVEFHTDVVKGAVAKFPGHPLIL 101 (154)
Q Consensus 23 ~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l 101 (154)
..++|++||.|.+-..+-+..+.+++... .+..+..+. -| .+. ..........++...+.++. ...+. +-+.+
T Consensus 26 ~~PvViwHGlgD~~~~~~~~~~~~~i~~~-~~~pg~~v~-ig--~~~~~s~~~~~~~Qv~~vce~l~~-~~~L~-~G~na 99 (306)
T PLN02606 26 SVPFVLFHGFGGECSNGKVSNLTQFLINH-SGYPGTCVE-IG--NGVQDSLFMPLRQQASIACEKIKQ-MKELS-EGYNI 99 (306)
T ss_pred CCCEEEECCCCcccCCchHHHHHHHHHhC-CCCCeEEEE-EC--CCcccccccCHHHHHHHHHHHHhc-chhhc-CceEE
Confidence 44689999999655444555677777532 233223322 12 121 12223345566666666666 33344 25999
Q ss_pred EEeCcchHHHHHHHhhcCc--cccEEEEeccCccccchhh
Q 031716 102 AGKSMGSRVSCMVACKEDI--AASAVLCLGYPLKVCYYLC 139 (154)
Q Consensus 102 ~G~S~Gg~~a~~~a~~~~~--~i~~~v~~~~p~~~~~~~~ 139 (154)
+|+|+||.++-.++++.++ .++.+|.+++|..+...+.
T Consensus 100 IGfSQGglflRa~ierc~~~p~V~nlISlggph~Gv~g~p 139 (306)
T PLN02606 100 VAESQGNLVARGLIEFCDNAPPVINYVSLGGPHAGVAAIP 139 (306)
T ss_pred EEEcchhHHHHHHHHHCCCCCCcceEEEecCCcCCcccCc
Confidence 9999999999999999765 5999999999998876643
No 146
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=98.43 E-value=8.5e-07 Score=66.41 Aligned_cols=109 Identities=17% Similarity=0.165 Sum_probs=80.7
Q ss_pred CCCcEEEEecCCCCCCCchHH-----HHHHHHHHhhcCCeEEEEEcCCCCCCCCCC---CC---c-----hH-HHHHHHH
Q 031716 21 SSSPVVVFAHGAGAPSSSDWM-----IKWKDMLGKALDAVEVVTFDYPYIAGGKRK---AP---P-----KA-EKLVEFH 83 (154)
Q Consensus 21 ~~~~~il~lHG~~~~~~~~~~-----~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~---~~---~-----~~-~~~~~~~ 83 (154)
.++|+|++.||...++ ..|. +....++.+ +||.|..=+-||...+... .+ . .. +-...|+
T Consensus 71 ~~rp~Vll~HGLl~sS-~~Wv~n~p~~sLaf~Lad--aGYDVWLgN~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDL 147 (403)
T KOG2624|consen 71 KKRPVVLLQHGLLASS-SSWVLNGPEQSLAFLLAD--AGYDVWLGNNRGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDL 147 (403)
T ss_pred CCCCcEEEeecccccc-ccceecCccccHHHHHHH--cCCceeeecCcCcccchhhcccCCcCCcceeecchhhhhhcCH
Confidence 7889999999988877 4452 245566666 8999999999984322110 00 0 11 2244577
Q ss_pred HHHHHHHHHhCCCCeEEEEEeCcchHHHHHHHhhcCc---cccEEEEeccCc
Q 031716 84 TDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDI---AASAVLCLGYPL 132 (154)
Q Consensus 84 ~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~---~i~~~v~~~~p~ 132 (154)
-+.|+++++..+.+++..+|||+|+......+...|+ +|+..++++|+.
T Consensus 148 PA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~ 199 (403)
T KOG2624|consen 148 PAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAA 199 (403)
T ss_pred HHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchh
Confidence 8888888888888899999999999999988887654 799999998866
No 147
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.42 E-value=6.8e-06 Score=55.74 Aligned_cols=85 Identities=25% Similarity=0.397 Sum_probs=57.2
Q ss_pred HHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCcchHHHHHHHhh---cC
Q 031716 43 KWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACK---ED 119 (154)
Q Consensus 43 ~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~---~~ 119 (154)
.|..+...+...+.++.++.+|++.+.. .........+.+.+.+ .+..+..++.++|||+||.++..++.+ .+
T Consensus 14 ~~~~~~~~l~~~~~v~~~~~~g~~~~~~-~~~~~~~~~~~~~~~l---~~~~~~~~~~l~g~s~Gg~~a~~~a~~l~~~~ 89 (212)
T smart00824 14 EYARLAAALRGRRDVSALPLPGFGPGEP-LPASADALVEAQAEAV---LRAAGGRPFVLVGHSSGGLLAHAVAARLEARG 89 (212)
T ss_pred HHHHHHHhcCCCccEEEecCCCCCCCCC-CCCCHHHHHHHHHHHH---HHhcCCCCeEEEEECHHHHHHHHHHHHHHhCC
Confidence 4777777777789999999999853332 2222222223333222 333455689999999999999988886 34
Q ss_pred ccccEEEEeccC
Q 031716 120 IAASAVLCLGYP 131 (154)
Q Consensus 120 ~~i~~~v~~~~p 131 (154)
..+.++++++..
T Consensus 90 ~~~~~l~~~~~~ 101 (212)
T smart00824 90 IPPAAVVLLDTY 101 (212)
T ss_pred CCCcEEEEEccC
Confidence 568888877653
No 148
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.39 E-value=8e-06 Score=59.76 Aligned_cols=110 Identities=18% Similarity=0.198 Sum_probs=70.3
Q ss_pred CCCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCC---------ch---HHHHHHHHHHHHH
Q 031716 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAP---------PK---AEKLVEFHTDVVK 88 (154)
Q Consensus 21 ~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~---------~~---~~~~~~~~~~~i~ 88 (154)
..+|++|.+.|.|......-...++.-+. .+|...+.+..|.+|..++... +- ....+.|....+.
T Consensus 90 ~~rp~~IhLagTGDh~f~rR~~l~a~pLl--~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~ 167 (348)
T PF09752_consen 90 PYRPVCIHLAGTGDHGFWRRRRLMARPLL--KEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLH 167 (348)
T ss_pred CCCceEEEecCCCccchhhhhhhhhhHHH--HcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHH
Confidence 46899999999886432111111122222 2699999999998864332110 00 1223344444444
Q ss_pred HHHHhCCCCeEEEEEeCcchHHHHHHHhhcCccccEEEEeccCcc
Q 031716 89 GAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLK 133 (154)
Q Consensus 89 ~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~~ 133 (154)
++.++ +..++.+.|.||||..|...+...|..+..+-++++...
T Consensus 168 Wl~~~-G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sA 211 (348)
T PF09752_consen 168 WLERE-GYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSA 211 (348)
T ss_pred HHHhc-CCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCC
Confidence 55454 777999999999999999999999988777777765443
No 149
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=98.38 E-value=2.3e-06 Score=60.97 Aligned_cols=112 Identities=16% Similarity=0.105 Sum_probs=58.4
Q ss_pred CcEEEEecCCCCCCCch-HHHHHHHHHHhhcCCeEEEEEcCCCCCCCCC-CCCchHHHHHHHHHHHHHHHHHh---CCCC
Q 031716 23 SPVVVFAHGAGAPSSSD-WMIKWKDMLGKALDAVEVVTFDYPYIAGGKR-KAPPKAEKLVEFHTDVVKGAVAK---FPGH 97 (154)
Q Consensus 23 ~~~il~lHG~~~~~~~~-~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~-~~~~~~~~~~~~~~~~i~~~~~~---~~~~ 97 (154)
..+||+.||.|.+...+ -+....++++..-+|.-|.+++.-. +.. ......-..+.+..+.+-..+.. +. +
T Consensus 5 ~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig~---~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L~-~ 80 (279)
T PF02089_consen 5 PLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIGN---DPSEDVENSFFGNVNDQVEQVCEQLANDPELA-N 80 (279)
T ss_dssp S--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SSS---SHHHHHHHHHHSHHHHHHHHHHHHHHH-GGGT-T
T ss_pred CCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEECC---CcchhhhhhHHHHHHHHHHHHHHHHhhChhhh-c
Confidence 34689999999764322 3456777887766888888887632 110 00011111223333333333322 22 3
Q ss_pred eEEEEEeCcchHHHHHHHhhcCc-cccEEEEeccCccccchh
Q 031716 98 PLILAGKSMGSRVSCMVACKEDI-AASAVLCLGYPLKVCYYL 138 (154)
Q Consensus 98 ~i~l~G~S~Gg~~a~~~a~~~~~-~i~~~v~~~~p~~~~~~~ 138 (154)
-+.++|+|+||.++-.++++.++ .++.+|.+++|..+...+
T Consensus 81 G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph~Gv~g~ 122 (279)
T PF02089_consen 81 GFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPHMGVFGL 122 (279)
T ss_dssp -EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--TT-BSS-
T ss_pred ceeeeeeccccHHHHHHHHHCCCCCceeEEEecCcccccccC
Confidence 69999999999999999998654 699999999999877654
No 150
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.37 E-value=1.2e-06 Score=67.63 Aligned_cols=110 Identities=35% Similarity=0.614 Sum_probs=79.1
Q ss_pred CCcEEEEecCCC-CCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHH----HHHhCCC
Q 031716 22 SSPVVVFAHGAG-APSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKG----AVAKFPG 96 (154)
Q Consensus 22 ~~~~il~lHG~~-~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~----~~~~~~~ 96 (154)
..|.++++||.+ ....++|...|...+.-..+-..+-.||++.-.+|.+ .....+.+....++ ...+++.
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~igG~n-----I~h~ae~~vSf~r~kvlei~gefph 249 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPIGGAN-----IKHAAEYSVSFDRYKVLEITGEFPH 249 (784)
T ss_pred CCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCCCCcc-----hHHHHHHHHHHhhhhhhhhhccCCC
Confidence 468899999988 4455777778998888766677888888886423322 23334444444443 3345677
Q ss_pred CeEEEEEeCcchHHHHHHHhhcC-ccccEEEEeccCccccc
Q 031716 97 HPLILAGKSMGSRVSCMVACKED-IAASAVLCLGYPLKVCY 136 (154)
Q Consensus 97 ~~i~l~G~S~Gg~~a~~~a~~~~-~~i~~~v~~~~p~~~~~ 136 (154)
.+|+|+|+|||+.++.++...+. ..++++||++.|++..+
T Consensus 250 a~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vd 290 (784)
T KOG3253|consen 250 APIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVD 290 (784)
T ss_pred CceEEEecccCceeeEEeccccCCceEEEEEEecccccCCC
Confidence 89999999999999998887654 35999999999886654
No 151
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.35 E-value=3.5e-06 Score=61.85 Aligned_cols=93 Identities=18% Similarity=0.202 Sum_probs=57.1
Q ss_pred CCCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCC---------CCchHHHHHHHHHHHHHHHH
Q 031716 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRK---------APPKAEKLVEFHTDVVKGAV 91 (154)
Q Consensus 21 ~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~---------~~~~~~~~~~~~~~~i~~~~ 91 (154)
...|+|++-||.|++.. .+. ..++.+.. .||.|..+++||...+... .+........++...+..+.
T Consensus 69 ~~~PlvvlshG~Gs~~~-~f~-~~A~~lAs--~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~ 144 (365)
T COG4188 69 YLLPLVVLSHGSGSYVT-GFA-WLAEHLAS--YGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALL 144 (365)
T ss_pred CcCCeEEecCCCCCCcc-chh-hhHHHHhh--CceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHH
Confidence 36799999999999863 221 23333333 7999999999984322111 11111122233333333333
Q ss_pred H---------hCCCCeEEEEEeCcchHHHHHHHhh
Q 031716 92 A---------KFPGHPLILAGKSMGSRVSCMVACK 117 (154)
Q Consensus 92 ~---------~~~~~~i~l~G~S~Gg~~a~~~a~~ 117 (154)
+ +++..+|.++|||+||+.++..+.-
T Consensus 145 ~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA 179 (365)
T COG4188 145 QLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGA 179 (365)
T ss_pred HhhcCcccccccCccceEEEecccccHHHHHhccc
Confidence 2 2345699999999999999988754
No 152
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.34 E-value=2.6e-06 Score=58.82 Aligned_cols=111 Identities=12% Similarity=0.029 Sum_probs=54.3
Q ss_pred CCcEEEEecCCCCCCCchHHHHHHHHHHhhcC-CeEEEEEcCCCCC---CCCC------------------CCC----ch
Q 031716 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKALD-AVEVVTFDYPYIA---GGKR------------------KAP----PK 75 (154)
Q Consensus 22 ~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~g---~~~~------------------~~~----~~ 75 (154)
.++-||+|||++.|. ..+......+-..+.+ ++..+.+|-|.-- .+.. ... ..
T Consensus 3 ~k~riLcLHG~~~na-~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 81 (212)
T PF03959_consen 3 RKPRILCLHGYGQNA-EIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDH 81 (212)
T ss_dssp ---EEEEE--TT--H-HHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SG
T ss_pred CCceEEEeCCCCcCH-HHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCcc
Confidence 467899999999987 5554455555555555 8888888855310 0000 000 11
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCeEEEEEeCcchHHHHHHHhhc--------CccccEEEEeccCccc
Q 031716 76 AEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKE--------DIAASAVLCLGYPLKV 134 (154)
Q Consensus 76 ~~~~~~~~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--------~~~i~~~v~~~~p~~~ 134 (154)
....+++..+.+.+.+++.+. =..|+|+|+||.+|..++... ...++-+|+++...+.
T Consensus 82 ~~~~~~~sl~~l~~~i~~~GP-fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~ 147 (212)
T PF03959_consen 82 EYEGLDESLDYLRDYIEENGP-FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPP 147 (212)
T ss_dssp GG---HHHHHHHHHHHHHH----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----E
T ss_pred cccCHHHHHHHHHHHHHhcCC-eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCC
Confidence 123345555555555555332 356899999999999888642 1246778888766554
No 153
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.33 E-value=2.2e-05 Score=54.85 Aligned_cols=114 Identities=11% Similarity=0.079 Sum_probs=70.4
Q ss_pred CCCCCCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCC----C---CCchHHHHHHHHHHHHHHH
Q 031716 18 DDTSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKR----K---APPKAEKLVEFHTDVVKGA 90 (154)
Q Consensus 18 ~~~~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~----~---~~~~~~~~~~~~~~~i~~~ 90 (154)
....+++.++++.|..|..+ .+.+....+...+.....++.+...||- +-. . .........++..+.-.++
T Consensus 24 ~~~~~~~li~~IpGNPG~~g-FY~~F~~~L~~~l~~r~~~wtIsh~~H~-~~P~sl~~~~s~~~~eifsL~~QV~HKlaF 101 (301)
T KOG3975|consen 24 KSGEDKPLIVWIPGNPGLLG-FYTEFARHLHLNLIDRLPVWTISHAGHA-LMPASLREDHSHTNEEIFSLQDQVDHKLAF 101 (301)
T ss_pred cCCCCceEEEEecCCCCchh-HHHHHHHHHHHhcccccceeEEeccccc-cCCcccccccccccccccchhhHHHHHHHH
Confidence 34467899999999999875 2222223333333344668888777762 111 0 0111233456666666666
Q ss_pred HHhC--CCCeEEEEEeCcchHHHHHHHhhcC--ccccEEEEeccCcc
Q 031716 91 VAKF--PGHPLILAGKSMGSRVSCMVACKED--IAASAVLCLGYPLK 133 (154)
Q Consensus 91 ~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~~--~~i~~~v~~~~p~~ 133 (154)
++.. ...+++++|||.|+++.+.+..... -.+..++++-|...
T Consensus 102 ik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIe 148 (301)
T KOG3975|consen 102 IKEYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIE 148 (301)
T ss_pred HHHhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHH
Confidence 6553 3459999999999999999988532 24667777755543
No 154
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=98.31 E-value=2e-06 Score=66.87 Aligned_cols=115 Identities=17% Similarity=0.072 Sum_probs=74.6
Q ss_pred CCCCCCcEEEEecCCCCCCC--chHH-HHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCch-----HHHHHHHHHHHHHH
Q 031716 18 DDTSSSPVVVFAHGAGAPSS--SDWM-IKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPK-----AEKLVEFHTDVVKG 89 (154)
Q Consensus 18 ~~~~~~~~il~lHG~~~~~~--~~~~-~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~-----~~~~~~~~~~~i~~ 89 (154)
..+.+-|+++++-|+.+-.- .+|. ..+.++-.-...||.|+.+|-||.-......... ....++|..+-++.
T Consensus 637 ~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~ 716 (867)
T KOG2281|consen 637 QPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQM 716 (867)
T ss_pred CCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHH
Confidence 34556799999999766322 1110 0122222212269999999999842111111111 12246788888888
Q ss_pred HHHhC---CCCeEEEEEeCcchHHHHHHHhhcCccccEEEEeccCcc
Q 031716 90 AVAKF---PGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLK 133 (154)
Q Consensus 90 ~~~~~---~~~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~~ 133 (154)
+.++. +.+++.+-|||+||+++++...++|+.++.+|. +.|+.
T Consensus 717 Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIA-GapVT 762 (867)
T KOG2281|consen 717 LAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIA-GAPVT 762 (867)
T ss_pred HHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEec-cCcce
Confidence 88875 567999999999999999999999998777664 44443
No 155
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.30 E-value=8.1e-05 Score=54.39 Aligned_cols=114 Identities=13% Similarity=0.150 Sum_probs=70.1
Q ss_pred CCCCcEEEEecCCCCCCCch-HHHHHHHHHHhhcCCeEEEEEcCCCCC----------------CCCCC--CC-------
Q 031716 20 TSSSPVVVFAHGAGAPSSSD-WMIKWKDMLGKALDAVEVVTFDYPYIA----------------GGKRK--AP------- 73 (154)
Q Consensus 20 ~~~~~~il~lHG~~~~~~~~-~~~~~~~~~~~l~~~~~v~~~d~~g~g----------------~~~~~--~~------- 73 (154)
......+|++||.+.+.+.+ ....+++.+.+ .||.++++..|.-- .+... .+
T Consensus 84 ~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~--~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~ 161 (310)
T PF12048_consen 84 AKPQGAVIILPDWGEHPDWPGLIAPLRRELPD--HGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPA 161 (310)
T ss_pred CCCceEEEEecCCCCCCCcHhHHHHHHHHhhh--cCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCccc
Confidence 34556899999999886522 22334444444 79999998877510 00000 00
Q ss_pred -----chHHHHHHHHHHHHHHH---HHhCCCCeEEEEEeCcchHHHHHHHhhcCc-cccEEEEeccCcccc
Q 031716 74 -----PKAEKLVEFHTDVVKGA---VAKFPGHPLILAGKSMGSRVSCMVACKEDI-AASAVLCLGYPLKVC 135 (154)
Q Consensus 74 -----~~~~~~~~~~~~~i~~~---~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~-~i~~~v~~~~p~~~~ 135 (154)
.......+.+.+.+... ....+..+++|+||+.|++.+..+..+.+. .++++|++++..+..
T Consensus 162 ~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~~p~~ 232 (310)
T PF12048_consen 162 SAQEAEAREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAYWPQP 232 (310)
T ss_pred cccHhHHhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCCCCcc
Confidence 00111122233233333 333566679999999999999999998654 589999998876544
No 156
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=98.30 E-value=4.6e-06 Score=62.65 Aligned_cols=105 Identities=9% Similarity=0.011 Sum_probs=74.7
Q ss_pred cEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeEEEEE
Q 031716 24 PVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAG 103 (154)
Q Consensus 24 ~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~G 103 (154)
|+||++....+.. .. ..+..++.+..|+.|+..||.--+ .. .........+|+.+.+..++++.+.+ +.++|
T Consensus 103 ~pvLiV~Pl~g~~-~~---L~RS~V~~Ll~g~dVYl~DW~~p~--~v-p~~~~~f~ldDYi~~l~~~i~~~G~~-v~l~G 174 (406)
T TIGR01849 103 PAVLIVAPMSGHY-AT---LLRSTVEALLPDHDVYITDWVNAR--MV-PLSAGKFDLEDYIDYLIEFIRFLGPD-IHVIA 174 (406)
T ss_pred CcEEEEcCCchHH-HH---HHHHHHHHHhCCCcEEEEeCCCCC--CC-chhcCCCCHHHHHHHHHHHHHHhCCC-CcEEE
Confidence 6788888876432 21 246667766679999999997532 11 01122335678888888888887766 99999
Q ss_pred eCcchHHHHHHHhh-----cCccccEEEEeccCccccc
Q 031716 104 KSMGSRVSCMVACK-----EDIAASAVLCLGYPLKVCY 136 (154)
Q Consensus 104 ~S~Gg~~a~~~a~~-----~~~~i~~~v~~~~p~~~~~ 136 (154)
+|+||.+++.++.. +|.+++.++++++|++...
T Consensus 175 vCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~ 212 (406)
T TIGR01849 175 VCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARA 212 (406)
T ss_pred EchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCC
Confidence 99999997765554 3667999999999997653
No 157
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=98.28 E-value=4.8e-06 Score=67.33 Aligned_cols=113 Identities=14% Similarity=0.148 Sum_probs=75.7
Q ss_pred CCCCcEEEEecCCCCCCC--chHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCC----C-chHHHHHHHHHHHHHHHHH
Q 031716 20 TSSSPVVVFAHGAGAPSS--SDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKA----P-PKAEKLVEFHTDVVKGAVA 92 (154)
Q Consensus 20 ~~~~~~il~lHG~~~~~~--~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~----~-~~~~~~~~~~~~~i~~~~~ 92 (154)
.+.-|.++..||+.++.. ..+...|..++.. ..++.|+.+|.||.+.-.... . .-....++|+...++.+++
T Consensus 523 ~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s-~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~ 601 (755)
T KOG2100|consen 523 SKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVS-SRGFAVLQVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLK 601 (755)
T ss_pred CCCCCEEEEecCCCCcceeeeeEEecHHHHhhc-cCCeEEEEEcCCCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHh
Confidence 345688999999886322 2222245555321 279999999999964211110 0 1122356778888888877
Q ss_pred hC--CCCeEEEEEeCcchHHHHHHHhhcC-ccccEEEEeccCcc
Q 031716 93 KF--PGHPLILAGKSMGSRVSCMVACKED-IAASAVLCLGYPLK 133 (154)
Q Consensus 93 ~~--~~~~i~l~G~S~Gg~~a~~~a~~~~-~~i~~~v~~~~p~~ 133 (154)
.. +.+++.|+|+|.||+++...+...+ +.+++.++++|...
T Consensus 602 ~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd 645 (755)
T KOG2100|consen 602 LPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTD 645 (755)
T ss_pred cccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceee
Confidence 63 5669999999999999999999987 55666677776543
No 158
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=98.27 E-value=1.1e-05 Score=65.46 Aligned_cols=85 Identities=13% Similarity=0.046 Sum_probs=62.3
Q ss_pred HHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHh----------------CCCCeEEEEEeCcc
Q 031716 44 WKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAK----------------FPGHPLILAGKSMG 107 (154)
Q Consensus 44 ~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~----------------~~~~~i~l~G~S~G 107 (154)
+.+.+.. +||.|+.+|.||.+.+............++..+.|+++..+ ....+|.++|.|+|
T Consensus 271 ~~~~~~~--rGYaVV~~D~RGtg~SeG~~~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~ 348 (767)
T PRK05371 271 LNDYFLP--RGFAVVYVSGIGTRGSDGCPTTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYL 348 (767)
T ss_pred HHHHHHh--CCeEEEEEcCCCCCCCCCcCccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHH
Confidence 4455544 79999999999986544332222244567777778877632 12469999999999
Q ss_pred hHHHHHHHhhcCccccEEEEecc
Q 031716 108 SRVSCMVACKEDIAASAVLCLGY 130 (154)
Q Consensus 108 g~~a~~~a~~~~~~i~~~v~~~~ 130 (154)
|.+++.+|...+..++++|..++
T Consensus 349 G~~~~~aAa~~pp~LkAIVp~a~ 371 (767)
T PRK05371 349 GTLPNAVATTGVEGLETIIPEAA 371 (767)
T ss_pred HHHHHHHHhhCCCcceEEEeeCC
Confidence 99999999988888898887643
No 159
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.25 E-value=9.7e-06 Score=64.50 Aligned_cols=109 Identities=17% Similarity=0.169 Sum_probs=58.6
Q ss_pred CCcEEEEecCCCCCCCchHHHHHHHHHHh--------------hcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHH
Q 031716 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGK--------------ALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVV 87 (154)
Q Consensus 22 ~~~~il~lHG~~~~~~~~~~~~~~~~~~~--------------l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i 87 (154)
+..+|+|++|..|+.. ..+ .++....+ ....++.+++|+-+ +-.--.-....+..+-+.++|
T Consensus 88 sGIPVLFIPGNAGSyK-QvR-SiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnE--e~tAm~G~~l~dQtEYV~dAI 163 (973)
T KOG3724|consen 88 SGIPVLFIPGNAGSYK-QVR-SIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNE--EFTAMHGHILLDQTEYVNDAI 163 (973)
T ss_pred CCceEEEecCCCCchH-HHH-HHHHHHhhhhcCCchhhhhcccCccccceEEEcccc--hhhhhccHhHHHHHHHHHHHH
Confidence 4567999999888753 111 22222221 11246677777653 100000111222333333444
Q ss_pred HHHHHhCC---------CCeEEEEEeCcchHHHHHHHhh---cCccccEEEEeccCccc
Q 031716 88 KGAVAKFP---------GHPLILAGKSMGSRVSCMVACK---EDIAASAVLCLGYPLKV 134 (154)
Q Consensus 88 ~~~~~~~~---------~~~i~l~G~S~Gg~~a~~~a~~---~~~~i~~~v~~~~p~~~ 134 (154)
+.+++.+. ...++|+||||||.+|...+.. .++.|..++..++|...
T Consensus 164 k~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH~a 222 (973)
T KOG3724|consen 164 KYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPHAA 222 (973)
T ss_pred HHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCcccC
Confidence 44443221 2359999999999999877754 24456777777776643
No 160
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=98.21 E-value=8.4e-06 Score=53.34 Aligned_cols=58 Identities=17% Similarity=0.236 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEEEeCcchHHHHHHHhhcCc----cccEEEEeccCccccch
Q 031716 80 VEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDI----AASAVLCLGYPLKVCYY 137 (154)
Q Consensus 80 ~~~~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~----~i~~~v~~~~p~~~~~~ 137 (154)
...+...++......+..++++.|||+||.+|..++..... ....++.+++|......
T Consensus 11 ~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~~~~~ 72 (153)
T cd00741 11 ANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRVGNAA 72 (153)
T ss_pred HHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcccchH
Confidence 33444444454444577899999999999999998887543 56778888888876654
No 161
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=98.20 E-value=9.5e-05 Score=49.57 Aligned_cols=116 Identities=19% Similarity=0.155 Sum_probs=67.0
Q ss_pred CCCCcEEEEecCCCCCCCchHHH------HHH----HHHHhhcCCeEEEEEcCCCCCCC-----CCCCCchHHHHHHHHH
Q 031716 20 TSSSPVVVFAHGAGAPSSSDWMI------KWK----DMLGKALDAVEVVTFDYPYIAGG-----KRKAPPKAEKLVEFHT 84 (154)
Q Consensus 20 ~~~~~~il~lHG~~~~~~~~~~~------~~~----~~~~~l~~~~~v~~~d~~g~g~~-----~~~~~~~~~~~~~~~~ 84 (154)
...+.+.++++|.+.+....... .+. +..+....+-.+-.+.|.|+... .-..+.....-..++.
T Consensus 16 d~A~~Vav~VPG~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vAvV~WlgYdaP~~~~~~a~~~~~A~~ga~~L~ 95 (177)
T PF06259_consen 16 DTADHVAVLVPGTGTTLDSFLGGMDDEARALRAAAARAARAAGPGGSVAVVAWLGYDAPAGGLPDAASPGYARAGAPRLA 95 (177)
T ss_pred CCcCeeEEEcCCCCCCcccccchhHHHHHHHHHHHHHHHHhhcCCCCeEEEEEcCCCCCCCccccccCchHHHHHHHHHH
Confidence 34567899999988877532211 111 11112223335555555554221 0001111222333444
Q ss_pred HHHHHHHHhC-CCCeEEEEEeCcchHHHHHHHhhcCccccEEEEeccCcccc
Q 031716 85 DVVKGAVAKF-PGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKVC 135 (154)
Q Consensus 85 ~~i~~~~~~~-~~~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~~~~ 135 (154)
..++.+.... +..++.++|||+|+.++-..+.+.+..++.+|++++|-...
T Consensus 96 ~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~g~ 147 (177)
T PF06259_consen 96 RFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGMGV 147 (177)
T ss_pred HHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCCCC
Confidence 4444443333 45589999999999999988888677899999998876543
No 162
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=98.20 E-value=3.7e-05 Score=51.75 Aligned_cols=109 Identities=24% Similarity=0.281 Sum_probs=66.7
Q ss_pred EEEEecCCCCCCCch-HHHHHHHHHHhhc--CCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeEEE
Q 031716 25 VVVFAHGAGAPSSSD-WMIKWKDMLGKAL--DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLIL 101 (154)
Q Consensus 25 ~il~lHG~~~~~~~~-~~~~~~~~~~~l~--~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l 101 (154)
.||+..|.+...+.- .-..+.+.++... ....+..++||...... .+......-..++.+.++....+.+..+++|
T Consensus 7 ~vi~aRGT~E~~g~~~~g~~~~~~l~~~~g~~~~~~~~V~YpA~~~~~-~y~~S~~~G~~~~~~~i~~~~~~CP~~kivl 85 (179)
T PF01083_consen 7 HVIFARGTGEPPGVGRVGPPFADALQAQPGGTSVAVQGVEYPASLGPN-SYGDSVAAGVANLVRLIEEYAARCPNTKIVL 85 (179)
T ss_dssp EEEEE--TTSSTTTCCCHHHHHHHHHHHCTTCEEEEEE--S---SCGG-SCHHHHHHHHHHHHHHHHHHHHHSTTSEEEE
T ss_pred EEEEecCCCCCCCCccccHHHHHHHHhhcCCCeeEEEecCCCCCCCcc-cccccHHHHHHHHHHHHHHHHHhCCCCCEEE
Confidence 466667755543211 1123444444432 34677778898642211 2233455566778888888888888889999
Q ss_pred EEeCcchHHHHHHHhh------cCccccEEEEeccCccc
Q 031716 102 AGKSMGSRVSCMVACK------EDIAASAVLCLGYPLKV 134 (154)
Q Consensus 102 ~G~S~Gg~~a~~~a~~------~~~~i~~~v~~~~p~~~ 134 (154)
+|+|+|+.++..++.. ..++|.++++++-|...
T Consensus 86 ~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~~ 124 (179)
T PF01083_consen 86 AGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRRG 124 (179)
T ss_dssp EEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTTB
T ss_pred EecccccHHHHHHHHhccCChhhhhhEEEEEEecCCccc
Confidence 9999999999998876 24579999999887764
No 163
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.20 E-value=1.6e-05 Score=57.19 Aligned_cols=107 Identities=15% Similarity=0.167 Sum_probs=64.4
Q ss_pred CCCCcEEEEecCCCCCCCchHHHHHHHHHHhhc-CCeEEEEEcCCCCCC-------CC--CC------------------
Q 031716 20 TSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKAL-DAVEVVTFDYPYIAG-------GK--RK------------------ 71 (154)
Q Consensus 20 ~~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~-~~~~v~~~d~~g~g~-------~~--~~------------------ 71 (154)
.+.-|++||-||.|++.. .|..+--.+. .||.|.++++|.... .. ..
T Consensus 115 ~~k~PvvvFSHGLggsRt-----~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~eke 189 (399)
T KOG3847|consen 115 NDKYPVVVFSHGLGGSRT-----LYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKE 189 (399)
T ss_pred CCCccEEEEecccccchh-----hHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCcee
Confidence 456799999999998753 3444444443 899999999886431 00 00
Q ss_pred ---CCchHHHHHHHHHHHHHHHHH-----------------------hCCCCeEEEEEeCcchHHHHHHHhhcCccccEE
Q 031716 72 ---APPKAEKLVEFHTDVVKGAVA-----------------------KFPGHPLILAGKSMGSRVSCMVACKEDIAASAV 125 (154)
Q Consensus 72 ---~~~~~~~~~~~~~~~i~~~~~-----------------------~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~ 125 (154)
..++.....++...+++-+.+ .+.-.++.++|||+||+.++.....+.+ ++..
T Consensus 190 f~irNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t~-Frca 268 (399)
T KOG3847|consen 190 FHIRNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHTD-FRCA 268 (399)
T ss_pred EEeeCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccccc-eeee
Confidence 001122233444443332221 1222478999999999999988887544 6666
Q ss_pred EEeccCc
Q 031716 126 LCLGYPL 132 (154)
Q Consensus 126 v~~~~p~ 132 (154)
|+++...
T Consensus 269 I~lD~WM 275 (399)
T KOG3847|consen 269 IALDAWM 275 (399)
T ss_pred eeeeeee
Confidence 6665433
No 164
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=98.20 E-value=9.9e-06 Score=62.21 Aligned_cols=111 Identities=14% Similarity=0.108 Sum_probs=67.8
Q ss_pred CCCCcEEEEecCCCCCCCchHHHHHH------------HHHHh---hcCCeEEEEEcCC-CCCCCCCC---CCchHHHHH
Q 031716 20 TSSSPVVVFAHGAGAPSSSDWMIKWK------------DMLGK---ALDAVEVVTFDYP-YIAGGKRK---APPKAEKLV 80 (154)
Q Consensus 20 ~~~~~~il~lHG~~~~~~~~~~~~~~------------~~~~~---l~~~~~v~~~d~~-g~g~~~~~---~~~~~~~~~ 80 (154)
..++|++|+++|+.|.+.... .+. .+... ..+...++.+|.| |+|-+... .........
T Consensus 74 ~~~~Pl~lwlnGGPG~ss~~G--~f~E~GP~~i~~~~~~~~~n~~sW~~~~~~l~iDqP~G~G~S~~~~~~~~~~~~~~a 151 (462)
T PTZ00472 74 NPEAPVLLWMTGGPGCSSMFA--LLAENGPCLMNETTGDIYNNTYSWNNEAYVIYVDQPAGVGFSYADKADYDHNESEVS 151 (462)
T ss_pred CCCCCEEEEECCCCcHHHHHh--hhccCCCeEEeCCCCceeECCcccccccCeEEEeCCCCcCcccCCCCCCCCChHHHH
Confidence 456799999999988763210 010 00000 1124678888987 55433221 122234566
Q ss_pred HHHHHHHHHHHHhC---CCCeEEEEEeCcchHHHHHHHhhc----------CccccEEEEeccCc
Q 031716 81 EFHTDVVKGAVAKF---PGHPLILAGKSMGSRVSCMVACKE----------DIAASAVLCLGYPL 132 (154)
Q Consensus 81 ~~~~~~i~~~~~~~---~~~~i~l~G~S~Gg~~a~~~a~~~----------~~~i~~~v~~~~p~ 132 (154)
+++.+.++.+.++. ...+++|+|+|+||..+..++.+- .-.++++++-++..
T Consensus 152 ~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~ 216 (462)
T PTZ00472 152 EDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLT 216 (462)
T ss_pred HHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEecccc
Confidence 77777777777654 347999999999999988777651 12467777655443
No 165
>KOG3101 consensus Esterase D [General function prediction only]
Probab=98.14 E-value=2.7e-06 Score=57.93 Aligned_cols=111 Identities=13% Similarity=0.152 Sum_probs=66.0
Q ss_pred CCCCCcEEEEecCCCCCCCchHHH--HHHHHHHhhcCCeEEEEEcC--CCCC-----------CCCCCCCchHH------
Q 031716 19 DTSSSPVVVFAHGAGAPSSSDWMI--KWKDMLGKALDAVEVVTFDY--PYIA-----------GGKRKAPPKAE------ 77 (154)
Q Consensus 19 ~~~~~~~il~lHG~~~~~~~~~~~--~~~~~~~~l~~~~~v~~~d~--~g~g-----------~~~~~~~~~~~------ 77 (154)
.+++.|++.++.|...+.. .+.+ .|.+.... .|..|+.||- ||.. .|..-+.+...
T Consensus 40 ~~k~~P~lf~LSGLTCT~~-Nfi~Ksg~qq~As~--hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~ 116 (283)
T KOG3101|consen 40 RGKRCPVLFYLSGLTCTHE-NFIEKSGFQQQASK--HGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKH 116 (283)
T ss_pred cCCcCceEEEecCCcccch-hhHhhhhHHHhHhh--cCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhh
Confidence 3456799999999988764 3322 24444444 7999999983 3421 11111111000
Q ss_pred H-HHHHHHHHHHHHHH----hCCCCeEEEEEeCcchHHHHHHHhhcCccccEEEEeccCc
Q 031716 78 K-LVEFHTDVVKGAVA----KFPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPL 132 (154)
Q Consensus 78 ~-~~~~~~~~i~~~~~----~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~ 132 (154)
+ +.+-+.+.+-++++ .++..++.|.||||||.-|+..+.+++.+.+.+-.++|-.
T Consensus 117 yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~ 176 (283)
T KOG3101|consen 117 YRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPIC 176 (283)
T ss_pred hhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceecccccc
Confidence 0 11111222222222 1334589999999999999999999998888777666543
No 166
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.02 E-value=0.00012 Score=50.06 Aligned_cols=111 Identities=14% Similarity=0.173 Sum_probs=63.4
Q ss_pred CCcEEEEecCCCCCCCchHHHH------------HHHHHHhhcCCeEEEEEcCCC---CCCCCCCCCchHHHHHHHHHHH
Q 031716 22 SSPVVVFAHGAGAPSSSDWMIK------------WKDMLGKALDAVEVVTFDYPY---IAGGKRKAPPKAEKLVEFHTDV 86 (154)
Q Consensus 22 ~~~~il~lHG~~~~~~~~~~~~------------~~~~~~~l~~~~~v~~~d~~g---~g~~~~~~~~~~~~~~~~~~~~ 86 (154)
+...+|++||.|....-.|... .-.+-+....||.|+..+--. +-.+...+.......++...-.
T Consensus 100 ~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~yv 179 (297)
T KOG3967|consen 100 PQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKYV 179 (297)
T ss_pred ccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHHH
Confidence 4558999999876654433210 011112222688888876431 1011111111111122223333
Q ss_pred HHHHHHhCCCCeEEEEEeCcchHHHHHHHhhcCc--cccEEEEeccCc
Q 031716 87 VKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDI--AASAVLCLGYPL 132 (154)
Q Consensus 87 i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~--~i~~~v~~~~p~ 132 (154)
...++.......++++.||.||...+.+..++|+ ++-++.+.+.++
T Consensus 180 w~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~ 227 (297)
T KOG3967|consen 180 WKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAM 227 (297)
T ss_pred HHHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccc
Confidence 3444555566789999999999999999999765 566777766663
No 167
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.99 E-value=5.3e-05 Score=56.48 Aligned_cols=111 Identities=13% Similarity=0.048 Sum_probs=75.9
Q ss_pred cEEEEecCCCCCCCchHHH---HHHHHHHhhcCCeEEEEEcCCCCCCCCCC----CCc-------hHHHHHHHHHHHHHH
Q 031716 24 PVVVFAHGAGAPSSSDWMI---KWKDMLGKALDAVEVVTFDYPYIAGGKRK----APP-------KAEKLVEFHTDVVKG 89 (154)
Q Consensus 24 ~~il~lHG~~~~~~~~~~~---~~~~~~~~l~~~~~v~~~d~~g~g~~~~~----~~~-------~~~~~~~~~~~~i~~ 89 (154)
.+|++--|.-++.. -+.. ...++.++ .+.-++-+++|.+|.+.+- ..+ .......|+++.++.
T Consensus 81 gPIffYtGNEGdie-~Fa~ntGFm~D~Ap~--~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~ 157 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIE-WFANNTGFMWDLAPE--LKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTF 157 (492)
T ss_pred CceEEEeCCcccHH-HHHhccchHHhhhHh--hCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHH
Confidence 45888888777652 1211 23344444 4677888899987643211 111 234456777888888
Q ss_pred HHHhCC--CCeEEEEEeCcchHHHHHHHhhcCccccEEEEeccCccccch
Q 031716 90 AVAKFP--GHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKVCYY 137 (154)
Q Consensus 90 ~~~~~~--~~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~~~~~~ 137 (154)
+++... ..+++.+|-|+||++|.++-.+||+.+.|++..+.|+.-..+
T Consensus 158 lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAPvl~f~d 207 (492)
T KOG2183|consen 158 LKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAPVLYFED 207 (492)
T ss_pred HhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCceEeecC
Confidence 877643 458999999999999999999999999998888777754443
No 168
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.98 E-value=0.00023 Score=50.29 Aligned_cols=108 Identities=20% Similarity=0.204 Sum_probs=70.4
Q ss_pred cEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCC--CCCCCchHHHHHHHHHHHHHHHHHhCCCCeEEE
Q 031716 24 PVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGG--KRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLIL 101 (154)
Q Consensus 24 ~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l 101 (154)
-++|++||.+....+.-+..+.++++++ .|..+++.+.- +| .+ ........++...+.+.. +..++ .-+.+
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~-~g~~v~~leig---~g~~~s-~l~pl~~Qv~~~ce~v~~-m~~ls-qGyni 96 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEEL-PGSPVYCLEIG---DGIKDS-SLMPLWEQVDVACEKVKQ-MPELS-QGYNI 96 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhC-CCCeeEEEEec---CCcchh-hhccHHHHHHHHHHHHhc-chhcc-CceEE
Confidence 4588999999876443344677777774 78888888763 22 11 122233344444444442 22233 35899
Q ss_pred EEeCcchHHHHHHHhhcC-ccccEEEEeccCccccchh
Q 031716 102 AGKSMGSRVSCMVACKED-IAASAVLCLGYPLKVCYYL 138 (154)
Q Consensus 102 ~G~S~Gg~~a~~~a~~~~-~~i~~~v~~~~p~~~~~~~ 138 (154)
+|.|+||.++-.++..-+ ..++..|.+++|..+....
T Consensus 97 vg~SQGglv~Raliq~cd~ppV~n~ISL~gPhaG~~~~ 134 (296)
T KOG2541|consen 97 VGYSQGGLVARALIQFCDNPPVKNFISLGGPHAGIYGI 134 (296)
T ss_pred EEEccccHHHHHHHHhCCCCCcceeEeccCCcCCccCC
Confidence 999999999998888632 3588899999988776543
No 169
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=97.96 E-value=0.0001 Score=50.53 Aligned_cols=85 Identities=22% Similarity=0.197 Sum_probs=55.8
Q ss_pred hhcCCeEEEEEcCCCCCCCC------CCCCchHHHHHHHHHHHHHHHHHhC-CCCeEEEEEeCcchHHHHHHHhhc----
Q 031716 50 KALDAVEVVTFDYPYIAGGK------RKAPPKAEKLVEFHTDVVKGAVAKF-PGHPLILAGKSMGSRVSCMVACKE---- 118 (154)
Q Consensus 50 ~l~~~~~v~~~d~~g~g~~~------~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~i~l~G~S~Gg~~a~~~a~~~---- 118 (154)
.+..-.+|++|-||...-.. ............|+.++.++.+++. +..+++|+|||+|+.+...+.+++
T Consensus 41 ~F~~~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~~~~~ 120 (207)
T PF11288_consen 41 AFNGVCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEEIAGD 120 (207)
T ss_pred hhhcCCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHHhcCc
Confidence 33356899999988532111 0011123335568888888888876 455999999999999999999874
Q ss_pred C--ccccEEEEeccCccc
Q 031716 119 D--IAASAVLCLGYPLKV 134 (154)
Q Consensus 119 ~--~~i~~~v~~~~p~~~ 134 (154)
| +++-++-+++.++..
T Consensus 121 pl~~rLVAAYliG~~v~~ 138 (207)
T PF11288_consen 121 PLRKRLVAAYLIGYPVTV 138 (207)
T ss_pred hHHhhhheeeecCccccH
Confidence 2 234444466666655
No 170
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=97.96 E-value=0.00014 Score=52.65 Aligned_cols=79 Identities=19% Similarity=0.087 Sum_probs=49.6
Q ss_pred hcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHh---C---CCCeEEEEEeCcchHHHHHHHhh---c-Cc
Q 031716 51 ALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAK---F---PGHPLILAGKSMGSRVSCMVACK---E-DI 120 (154)
Q Consensus 51 l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~---~---~~~~i~l~G~S~Gg~~a~~~a~~---~-~~ 120 (154)
|.+||.|+++||.|.|. .+... ........+.++...+. . ...++.++|||.||.-+...+.. | |+
T Consensus 23 L~~GyaVv~pDY~Glg~---~y~~~-~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l~~~YApe 98 (290)
T PF03583_consen 23 LARGYAVVAPDYEGLGT---PYLNG-RSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAELAPSYAPE 98 (290)
T ss_pred HHCCCEEEecCCCCCCC---cccCc-HhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHHhHHhCcc
Confidence 34799999999999754 22221 22234444444444432 1 23589999999999988766644 2 33
Q ss_pred -c--ccEEEEeccCcc
Q 031716 121 -A--ASAVLCLGYPLK 133 (154)
Q Consensus 121 -~--i~~~v~~~~p~~ 133 (154)
. +.++++.++|..
T Consensus 99 L~~~l~Gaa~gg~~~d 114 (290)
T PF03583_consen 99 LNRDLVGAAAGGPPAD 114 (290)
T ss_pred cccceeEEeccCCccC
Confidence 2 677777666553
No 171
>COG0627 Predicted esterase [General function prediction only]
Probab=97.95 E-value=7.9e-05 Score=54.44 Aligned_cols=116 Identities=17% Similarity=0.067 Sum_probs=68.3
Q ss_pred CCCCcEEEEecCCCCCCCch-HHHHHHHHHHhhcCCeEEEEEcCC--CC----------CCCCCCCCch-----------
Q 031716 20 TSSSPVVVFAHGAGAPSSSD-WMIKWKDMLGKALDAVEVVTFDYP--YI----------AGGKRKAPPK----------- 75 (154)
Q Consensus 20 ~~~~~~il~lHG~~~~~~~~-~~~~~~~~~~~l~~~~~v~~~d~~--g~----------g~~~~~~~~~----------- 75 (154)
+.+-|+++++||..++...- ....+.+.... .++.++.+|-. +. |.+.+.+.+-
T Consensus 51 ~~~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~--~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q 128 (316)
T COG0627 51 GRDIPVLYLLSGLTCNEPNVYLLDGLRRQADE--SGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQ 128 (316)
T ss_pred CCCCCEEEEeCCCCCCCCceEeccchhhhhhh--cCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccc
Confidence 35679999999988874211 11234555554 68888887421 11 1111111110
Q ss_pred -HHHHHHHHHHHHHHHHHhCC-CCeEEEEEeCcchHHHHHHHhhcCccccEEEEeccCccccch
Q 031716 76 -AEKLVEFHTDVVKGAVAKFP-GHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKVCYY 137 (154)
Q Consensus 76 -~~~~~~~~~~~i~~~~~~~~-~~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~~~~~~ 137 (154)
.....+++-..++....... .++..|+||||||.-|+.+|.++|++++.+..+++.+.....
T Consensus 129 ~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s~~ 192 (316)
T COG0627 129 WETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPSSP 192 (316)
T ss_pred hhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccccccccc
Confidence 11122333322222221111 136899999999999999999999999999988877766533
No 172
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=97.94 E-value=5.2e-05 Score=56.67 Aligned_cols=113 Identities=9% Similarity=-0.002 Sum_probs=78.1
Q ss_pred CcEEEEecCCCCCCC-chH--HHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeE
Q 031716 23 SPVVVFAHGAGAPSS-SDW--MIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPL 99 (154)
Q Consensus 23 ~~~il~lHG~~~~~~-~~~--~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i 99 (154)
.++++++|.+--... -+. -..+.+.+.+ +|..|+.++|+.-..+.. .-+-.++..+.+.+.++..++..+.++|
T Consensus 107 ~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~--~g~~vfvIsw~nPd~~~~-~~~~edYi~e~l~~aid~v~~itg~~~I 183 (445)
T COG3243 107 KRPLLIVPPWINKFYILDLSPEKSLVRWLLE--QGLDVFVISWRNPDASLA-AKNLEDYILEGLSEAIDTVKDITGQKDI 183 (445)
T ss_pred CCceEeeccccCceeEEeCCCCccHHHHHHH--cCCceEEEeccCchHhhh-hccHHHHHHHHHHHHHHHHHHHhCcccc
Confidence 456888888542111 000 1134455544 799999999986321111 1222344557777888888888888899
Q ss_pred EEEEeCcchHHHHHHHhhcCcc-ccEEEEeccCccccchh
Q 031716 100 ILAGKSMGSRVSCMVACKEDIA-ASAVLCLGYPLKVCYYL 138 (154)
Q Consensus 100 ~l~G~S~Gg~~a~~~a~~~~~~-i~~~v~~~~p~~~~~~~ 138 (154)
.++|++.||.++..++..++.+ |+.++++..|++.....
T Consensus 184 nliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~g 223 (445)
T COG3243 184 NLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAG 223 (445)
T ss_pred ceeeEecchHHHHHHHHhhhhcccccceeeecchhhcccc
Confidence 9999999999999999888777 99999999888776643
No 173
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.92 E-value=5e-05 Score=48.72 Aligned_cols=39 Identities=26% Similarity=0.532 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHhCCCCeEEEEEeCcchHHHHHHHhh
Q 031716 79 LVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACK 117 (154)
Q Consensus 79 ~~~~~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 117 (154)
..+++.+.++.+.++.+..++++.|||+||.+|..++..
T Consensus 46 ~~~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 46 LYDQILDALKELVEKYPDYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHh
Confidence 344666777777777777899999999999999988876
No 174
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=97.74 E-value=0.00023 Score=49.77 Aligned_cols=101 Identities=12% Similarity=0.034 Sum_probs=53.0
Q ss_pred CCCcEEEEecCCCCCCCchHHHHHHHHHHhhc-CCeEEEEEcCCCCCCCCCCCCch--HHHHHHHHHHHHHHHHHhCCCC
Q 031716 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKAL-DAVEVVTFDYPYIAGGKRKAPPK--AEKLVEFHTDVVKGAVAKFPGH 97 (154)
Q Consensus 21 ~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~-~~~~v~~~d~~g~g~~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~ 97 (154)
...++||+..|++...+ .++.+.+.+. +|+.|+.+|..-|-+-++...+. .....+++..++.++. ..+..
T Consensus 28 ~~~~tiliA~Gf~rrmd-----h~agLA~YL~~NGFhViRyDsl~HvGlSsG~I~eftms~g~~sL~~V~dwl~-~~g~~ 101 (294)
T PF02273_consen 28 KRNNTILIAPGFARRMD-----HFAGLAEYLSANGFHVIRYDSLNHVGLSSGDINEFTMSIGKASLLTVIDWLA-TRGIR 101 (294)
T ss_dssp --S-EEEEE-TT-GGGG-----GGHHHHHHHHTTT--EEEE---B-------------HHHHHHHHHHHHHHHH-HTT--
T ss_pred ccCCeEEEecchhHHHH-----HHHHHHHHHhhCCeEEEeccccccccCCCCChhhcchHHhHHHHHHHHHHHH-hcCCC
Confidence 45689999999997663 3444444443 89999999987653222222332 2234456666666665 56777
Q ss_pred eEEEEEeCcchHHHHHHHhhcCccccEEEEec
Q 031716 98 PLILAGKSMGSRVSCMVACKEDIAASAVLCLG 129 (154)
Q Consensus 98 ~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~ 129 (154)
++.|+.-|..|.+|+..+.+ .+ +.-+|..-
T Consensus 102 ~~GLIAaSLSaRIAy~Va~~-i~-lsfLitaV 131 (294)
T PF02273_consen 102 RIGLIAASLSARIAYEVAAD-IN-LSFLITAV 131 (294)
T ss_dssp -EEEEEETTHHHHHHHHTTT-S---SEEEEES
T ss_pred cchhhhhhhhHHHHHHHhhc-cC-cceEEEEe
Confidence 89999999999999999995 33 55555443
No 175
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.70 E-value=0.00018 Score=50.25 Aligned_cols=56 Identities=21% Similarity=0.347 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHhCCCCeEEEEEeCcchHHHHHHHhhc-----CccccEEEEeccCcccc
Q 031716 79 LVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKE-----DIAASAVLCLGYPLKVC 135 (154)
Q Consensus 79 ~~~~~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-----~~~i~~~v~~~~p~~~~ 135 (154)
...+....++..+++.+..++++.|||+||.+|..++... +..+. ++.++.|-.+.
T Consensus 110 ~~~~~~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~-~~tFg~P~vg~ 170 (229)
T cd00519 110 LYNQVLPELKSALKQYPDYKIIVTGHSLGGALASLLALDLRLRGPGSDVT-VYTFGQPRVGN 170 (229)
T ss_pred HHHHHHHHHHHHHhhCCCceEEEEccCHHHHHHHHHHHHHHhhCCCCceE-EEEeCCCCCCC
Confidence 3344455555556666777999999999999999888752 23344 44455554433
No 176
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.69 E-value=0.00018 Score=56.28 Aligned_cols=90 Identities=13% Similarity=0.116 Sum_probs=56.5
Q ss_pred HHHHHHhhc-CCe-----EEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCcchHHHHHHHhh
Q 031716 44 WKDMLGKAL-DAV-----EVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACK 117 (154)
Q Consensus 44 ~~~~~~~l~-~~~-----~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 117 (154)
|..+++.|. .|| ....+|||-. .. .....+.....+...|+...+..+.+|++|+|||||+.+++.+...
T Consensus 158 w~kLIe~L~~iGY~~~nL~gAPYDWRls--~~--~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~w 233 (642)
T PLN02517 158 WAVLIANLARIGYEEKNMYMAAYDWRLS--FQ--NTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKW 233 (642)
T ss_pred HHHHHHHHHHcCCCCCceeecccccccC--cc--chhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHh
Confidence 456666654 455 3344566642 01 1111233345555566666555556799999999999999988764
Q ss_pred cC---------------ccccEEEEeccCccccch
Q 031716 118 ED---------------IAASAVLCLGYPLKVCYY 137 (154)
Q Consensus 118 ~~---------------~~i~~~v~~~~p~~~~~~ 137 (154)
.. +-|++.|.+++|+.+..-
T Consensus 234 v~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lGs~K 268 (642)
T PLN02517 234 VEAPAPMGGGGGPGWCAKHIKAVMNIGGPFLGVPK 268 (642)
T ss_pred ccccccccCCcchHHHHHHHHHheecccccCCcHH
Confidence 21 237889999999887643
No 177
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=97.67 E-value=0.00011 Score=55.69 Aligned_cols=89 Identities=11% Similarity=0.188 Sum_probs=61.1
Q ss_pred HHHHHHHhhc-CCeE----E--EEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCcchHHHHHHH
Q 031716 43 KWKDMLGKAL-DAVE----V--VTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVA 115 (154)
Q Consensus 43 ~~~~~~~~l~-~~~~----v--~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a 115 (154)
.|..+++.+. -||. + ..+|||-. . ..++..+.....+...++......+.+|++|++||||+.+...+.
T Consensus 125 ~w~~~i~~lv~~GYe~~~~l~ga~YDwRls---~-~~~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl 200 (473)
T KOG2369|consen 125 YWHELIENLVGIGYERGKTLFGAPYDWRLS---Y-HNSEERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFL 200 (473)
T ss_pred HHHHHHHHHHhhCcccCceeeccccchhhc---c-CChhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHH
Confidence 4777777765 3554 3 34677741 1 123344556667777777777767778999999999999999999
Q ss_pred hhcCc--------cccEEEEeccCcccc
Q 031716 116 CKEDI--------AASAVLCLGYPLKVC 135 (154)
Q Consensus 116 ~~~~~--------~i~~~v~~~~p~~~~ 135 (154)
..++. -|++.+-++.|+.+.
T Consensus 201 ~w~~~~~~~W~~k~I~sfvnig~p~lG~ 228 (473)
T KOG2369|consen 201 KWVEAEGPAWCDKYIKSFVNIGAPWLGS 228 (473)
T ss_pred hcccccchhHHHHHHHHHHccCchhcCC
Confidence 88765 266667777766554
No 178
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=97.62 E-value=0.00038 Score=48.01 Aligned_cols=105 Identities=13% Similarity=0.028 Sum_probs=66.3
Q ss_pred CcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCC--C---------chHHHHHHHHHHHHHHHH
Q 031716 23 SPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKA--P---------PKAEKLVEFHTDVVKGAV 91 (154)
Q Consensus 23 ~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~--~---------~~~~~~~~~~~~~i~~~~ 91 (154)
+..||.+--..|.... -....++.+.. +||.|+.||+..- ...+.. . ........++...++++.
T Consensus 39 ~~~li~i~DvfG~~~~-n~r~~Adk~A~--~Gy~v~vPD~~~G-dp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk 114 (242)
T KOG3043|consen 39 KKVLIVIQDVFGFQFP-NTREGADKVAL--NGYTVLVPDFFRG-DPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLK 114 (242)
T ss_pred CeEEEEEEeeeccccH-HHHHHHHHHhc--CCcEEEcchhhcC-CCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHH
Confidence 3477777776655432 12234444444 7999999997531 111100 0 012224456667777777
Q ss_pred HhCCCCeEEEEEeCcchHHHHHHHhhcCccccEEEEeccCc
Q 031716 92 AKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPL 132 (154)
Q Consensus 92 ~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~ 132 (154)
.+....+|.++|++|||-++..+....+ .+.+++++-+.+
T Consensus 115 ~~g~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~ 154 (242)
T KOG3043|consen 115 NHGDSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSF 154 (242)
T ss_pred HcCCcceeeEEEEeecceEEEEeeccch-hheeeeEecCCc
Confidence 7766889999999999999999888877 566666654433
No 179
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.61 E-value=0.0012 Score=49.46 Aligned_cols=36 Identities=19% Similarity=0.101 Sum_probs=30.6
Q ss_pred CeEEEEEeCcchHHHHHHHhhcCccccEEEEeccCc
Q 031716 97 HPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPL 132 (154)
Q Consensus 97 ~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~ 132 (154)
-|++.+|+|.||++|...++--|..+++++=-+...
T Consensus 184 lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~ 219 (403)
T PF11144_consen 184 LPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYA 219 (403)
T ss_pred CcEEEEecCcHHHHHHHHHhhCccceeEEEecCccc
Confidence 389999999999999999999999999888544433
No 180
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.58 E-value=0.0018 Score=49.56 Aligned_cols=118 Identities=15% Similarity=0.208 Sum_probs=81.8
Q ss_pred CCCCcEEEEecCCCCCCCchH----HHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCC---c-----hHHHHHHHHHHHH
Q 031716 20 TSSSPVVVFAHGAGAPSSSDW----MIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAP---P-----KAEKLVEFHTDVV 87 (154)
Q Consensus 20 ~~~~~~il~lHG~~~~~~~~~----~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~---~-----~~~~~~~~~~~~i 87 (154)
..+.|+.|++-|-|.-. ..| ...|....++ -|..|+..++|.+|.+.+... . .......|+++.|
T Consensus 83 ~~~gPiFLmIGGEgp~~-~~wv~~~~~~~~~~Akk--fgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI 159 (514)
T KOG2182|consen 83 KPGGPIFLMIGGEGPES-DKWVGNENLTWLQWAKK--FGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFI 159 (514)
T ss_pred cCCCceEEEEcCCCCCC-CCccccCcchHHHHHHH--hCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHH
Confidence 45678888888866544 222 1246666666 689999999999874322211 1 1233455666666
Q ss_pred HHHHHhCC---CCeEEEEEeCcchHHHHHHHhhcCccccEEEEeccCccccchhhe
Q 031716 88 KGAVAKFP---GHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKVCYYLCL 140 (154)
Q Consensus 88 ~~~~~~~~---~~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~~~~~~~~~ 140 (154)
+.+-.+.+ ..|.+.+|-|+-|.++.++-+++|+.+.|.|..+.|+....++.+
T Consensus 160 ~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv~A~~DF~E 215 (514)
T KOG2182|consen 160 KAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPVLAKVDFYE 215 (514)
T ss_pred HHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccceeEEecHHH
Confidence 66655542 238899999999999999999999999999999999887655443
No 181
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.57 E-value=0.0003 Score=49.81 Aligned_cols=60 Identities=13% Similarity=0.049 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHHHHh---CCCCeEEEEEeCcchHHHHHHHhhcCccccEEEEeccCccccc
Q 031716 77 EKLVEFHTDVVKGAVAK---FPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKVCY 136 (154)
Q Consensus 77 ~~~~~~~~~~i~~~~~~---~~~~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~~~~~ 136 (154)
+.-.+.+.+.+.-+++. .+.++..++|||+||.+++.....+|+.+....+++|.+-...
T Consensus 114 ~~f~~fL~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlWw~n 176 (264)
T COG2819 114 DAFREFLTEQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLWWHN 176 (264)
T ss_pred HHHHHHHHHhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchhhhCC
Confidence 33445566666666665 3556799999999999999999999999999999887664433
No 182
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=97.54 E-value=0.00036 Score=50.12 Aligned_cols=112 Identities=17% Similarity=0.163 Sum_probs=64.5
Q ss_pred CCCCcEEEEecCCCCCCCchHHHHHHHHHHhhc-CCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHh-C---
Q 031716 20 TSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKAL-DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAK-F--- 94 (154)
Q Consensus 20 ~~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~-~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~-~--- 94 (154)
..+.|++++.||--..........+..++..-. ....++.+|+--......... .-....+.+++.+.-.++. +
T Consensus 95 ~~k~pvl~~~DG~~~~~~g~i~~~~dsli~~g~i~pai~vgid~~d~~~R~~~~~-~n~~~~~~L~~eLlP~v~~~yp~~ 173 (299)
T COG2382 95 LEKYPVLYLQDGQDWFRSGRIPRILDSLIAAGEIPPAILVGIDYIDVKKRREELH-CNEAYWRFLAQELLPYVEERYPTS 173 (299)
T ss_pred cccccEEEEeccHHHHhcCChHHHHHHHHHcCCCCCceEEecCCCCHHHHHHHhc-ccHHHHHHHHHHhhhhhhccCccc
Confidence 456799999998332211111112333333311 346777776543110111111 1223344455544444443 2
Q ss_pred -CCCeEEEEEeCcchHHHHHHHhhcCccccEEEEeccCc
Q 031716 95 -PGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPL 132 (154)
Q Consensus 95 -~~~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~ 132 (154)
..+.-+|.|.|+||.+++..+..+|+.+..++..++.+
T Consensus 174 ~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~ 212 (299)
T COG2382 174 ADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSF 212 (299)
T ss_pred ccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCcc
Confidence 23467899999999999999999999999999887654
No 183
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=97.52 E-value=0.00047 Score=48.08 Aligned_cols=48 Identities=23% Similarity=0.315 Sum_probs=35.6
Q ss_pred HHHHHHHHHhCCCCeEEEEEeCcchHHHHHHHhhc----CccccEEEEeccCc
Q 031716 84 TDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKE----DIAASAVLCLGYPL 132 (154)
Q Consensus 84 ~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~----~~~i~~~v~~~~p~ 132 (154)
.+.++.+++..+. ++.+.|||.||.+|..++..- .++|..+...++|-
T Consensus 72 ~~yl~~~~~~~~~-~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPG 123 (224)
T PF11187_consen 72 LAYLKKIAKKYPG-KIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPG 123 (224)
T ss_pred HHHHHHHHHhCCC-CEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCC
Confidence 3445555555554 599999999999999998872 35788888887654
No 184
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=97.51 E-value=0.00033 Score=48.48 Aligned_cols=52 Identities=15% Similarity=0.153 Sum_probs=37.7
Q ss_pred HHHHHHHHHHhC--CCCeEEEEEeCcchHHHHHHHhhcCccccEEEEeccCcccc
Q 031716 83 HTDVVKGAVAKF--PGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKVC 135 (154)
Q Consensus 83 ~~~~i~~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~~~~ 135 (154)
..++++++.++- +.++|.|+|.|.||-+|+.+|..+| .|+++|+++++....
T Consensus 6 fe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~~ 59 (213)
T PF08840_consen 6 FEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVVF 59 (213)
T ss_dssp HHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB--
T ss_pred HHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeEe
Confidence 345566666552 4469999999999999999999998 699999987755443
No 185
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=97.45 E-value=0.00063 Score=53.41 Aligned_cols=106 Identities=18% Similarity=0.149 Sum_probs=58.1
Q ss_pred CcEEEEecCCCCCCCchHH-HHHHHHHHhhcCCeEEEEEcCCC----CCCCCCCCCchHHHHHHHHHHHHHHHHHh---C
Q 031716 23 SPVVVFAHGAGAPSSSDWM-IKWKDMLGKALDAVEVVTFDYPY----IAGGKRKAPPKAEKLVEFHTDVVKGAVAK---F 94 (154)
Q Consensus 23 ~~~il~lHG~~~~~~~~~~-~~~~~~~~~l~~~~~v~~~d~~g----~g~~~~~~~~~~~~~~~~~~~~i~~~~~~---~ 94 (154)
.|++|++||++-..++... ..+........++..|+.++||- +........ .......|+..+++++.+. .
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~-~gN~gl~Dq~~AL~wv~~~I~~F 190 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAA-PGNLGLFDQLLALRWVKDNIPSF 190 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCC-CCcccHHHHHHHHHHHHHHHHhc
Confidence 7999999997765543110 01111111112568888999882 211111111 1223334555555555544 3
Q ss_pred --CCCeEEEEEeCcchHHHHHHHhh--cCccccEEEEec
Q 031716 95 --PGHPLILAGKSMGSRVSCMVACK--EDIAASAVLCLG 129 (154)
Q Consensus 95 --~~~~i~l~G~S~Gg~~a~~~a~~--~~~~i~~~v~~~ 129 (154)
+.++|.|+|||.||..+-.+... ....++.+|..+
T Consensus 191 GGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~S 229 (545)
T KOG1516|consen 191 GGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMS 229 (545)
T ss_pred CCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhc
Confidence 45699999999999988766553 123344455443
No 186
>PLN02162 triacylglycerol lipase
Probab=97.44 E-value=0.00064 Score=51.82 Aligned_cols=57 Identities=14% Similarity=0.152 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEEeCcchHHHHHHHhh---c-----CccccEEEEeccCccccch
Q 031716 81 EFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACK---E-----DIAASAVLCLGYPLKVCYY 137 (154)
Q Consensus 81 ~~~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~---~-----~~~i~~~v~~~~p~~~~~~ 137 (154)
.++.+.++..+.+.+..++++.|||+||.+|..++.. + .+++.+++.++.|-.+...
T Consensus 262 ~~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa~L~~~~~~~l~~~~~~vYTFGqPRVGn~~ 326 (475)
T PLN02162 262 YTIRQMLRDKLARNKNLKYILTGHSLGGALAALFPAILAIHGEDELLDKLEGIYTFGQPRVGDED 326 (475)
T ss_pred HHHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHHHHHHccccccccccceEEEeCCCCccCHH
Confidence 4556666777777777799999999999999987642 1 1235567888877766543
No 187
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=97.42 E-value=0.0022 Score=47.99 Aligned_cols=86 Identities=24% Similarity=0.322 Sum_probs=58.6
Q ss_pred CCCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEc-CCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeE
Q 031716 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFD-YPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPL 99 (154)
Q Consensus 21 ~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d-~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i 99 (154)
.....-||..|-|+= ++.-+.....+.+ +|+.|+.+| +|+| ...+. ......|+...++...++.+.+++
T Consensus 258 ~sd~~av~~SGDGGW--r~lDk~v~~~l~~--~gvpVvGvdsLRYf-W~~rt----Pe~~a~Dl~r~i~~y~~~w~~~~~ 328 (456)
T COG3946 258 NSDTVAVFYSGDGGW--RDLDKEVAEALQK--QGVPVVGVDSLRYF-WSERT----PEQIAADLSRLIRFYARRWGAKRV 328 (456)
T ss_pred CcceEEEEEecCCch--hhhhHHHHHHHHH--CCCceeeeehhhhh-hccCC----HHHHHHHHHHHHHHHHHhhCcceE
Confidence 456677888886652 3333344444544 899999999 4554 33332 244567888888888888888999
Q ss_pred EEEEeCcchHHHHHHH
Q 031716 100 ILAGKSMGSRVSCMVA 115 (154)
Q Consensus 100 ~l~G~S~Gg~~a~~~a 115 (154)
.|+|.|+|+=+--..-
T Consensus 329 ~liGySfGADvlP~~~ 344 (456)
T COG3946 329 LLIGYSFGADVLPFAY 344 (456)
T ss_pred EEEeecccchhhHHHH
Confidence 9999999997654433
No 188
>PLN00413 triacylglycerol lipase
Probab=97.41 E-value=0.00069 Score=51.74 Aligned_cols=57 Identities=18% Similarity=0.131 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEEeCcchHHHHHHHhh--------cCccccEEEEeccCccccch
Q 031716 81 EFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACK--------EDIAASAVLCLGYPLKVCYY 137 (154)
Q Consensus 81 ~~~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~--------~~~~i~~~v~~~~p~~~~~~ 137 (154)
.++.+.++.++++.+..++++.|||+||.+|..++.. ...++.++..++.|-.+...
T Consensus 268 y~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~PRVGN~~ 332 (479)
T PLN00413 268 YTILRHLKEIFDQNPTSKFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQPRVGDED 332 (479)
T ss_pred HHHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCCCCccHH
Confidence 3556677777777777899999999999999988742 12345677888887766543
No 189
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=97.38 E-value=0.0041 Score=47.03 Aligned_cols=109 Identities=18% Similarity=0.267 Sum_probs=64.6
Q ss_pred CCCCcEEEEecCCCCCCCchHHHHHHHHHHhhc--------------------CCeEEEEEcCC-CCCCCCCCCC----c
Q 031716 20 TSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKAL--------------------DAVEVVTFDYP-YIAGGKRKAP----P 74 (154)
Q Consensus 20 ~~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~--------------------~~~~v~~~d~~-g~g~~~~~~~----~ 74 (154)
.+++|++|++.|+.|.+.. + -.+.... +...++-+|.| |.|-+..... .
T Consensus 37 ~~~~Pl~~wlnGGPG~SS~-----~-g~f~e~GP~~~~~~~~~~l~~n~~sW~~~an~l~iD~PvGtGfS~~~~~~~~~~ 110 (415)
T PF00450_consen 37 PEDDPLILWLNGGPGCSSM-----W-GLFGENGPFRINPDGPYTLEDNPYSWNKFANLLFIDQPVGTGFSYGNDPSDYVW 110 (415)
T ss_dssp GCSS-EEEEEE-TTTB-TH-----H-HHHCTTSSEEEETTSTSEEEE-TT-GGGTSEEEEE--STTSTT-EESSGGGGS-
T ss_pred CCCccEEEEecCCceeccc-----c-ccccccCceEEeecccccccccccccccccceEEEeecCceEEeeccccccccc
Confidence 4678999999999988741 2 2222211 12466778866 4432222111 2
Q ss_pred hHHHHHHHHHHHHHHHHHhC---CCCeEEEEEeCcchHHHHHHHhh----c------CccccEEEEeccCccc
Q 031716 75 KAEKLVEFHTDVVKGAVAKF---PGHPLILAGKSMGSRVSCMVACK----E------DIAASAVLCLGYPLKV 134 (154)
Q Consensus 75 ~~~~~~~~~~~~i~~~~~~~---~~~~i~l~G~S~Gg~~a~~~a~~----~------~~~i~~~v~~~~p~~~ 134 (154)
......+++.+.++.+..+. ...+++|.|-|+||.-+..+|.. . +-.++++++.++.+..
T Consensus 111 ~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~dp 183 (415)
T PF00450_consen 111 NDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWIDP 183 (415)
T ss_dssp SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-SBH
T ss_pred hhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCccccc
Confidence 34556777888888887664 45699999999999987766654 2 2357888866655544
No 190
>PLN02454 triacylglycerol lipase
Probab=97.36 E-value=0.00098 Score=50.25 Aligned_cols=57 Identities=14% Similarity=0.249 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHHhCCCCe--EEEEEeCcchHHHHHHHhhc------C-c-cccEEEEeccCccccc
Q 031716 79 LVEFHTDVVKGAVAKFPGHP--LILAGKSMGSRVSCMVACKE------D-I-AASAVLCLGYPLKVCY 136 (154)
Q Consensus 79 ~~~~~~~~i~~~~~~~~~~~--i~l~G~S~Gg~~a~~~a~~~------~-~-~i~~~v~~~~p~~~~~ 136 (154)
..+++...++.+++..+..+ |++.|||+||.+|...|... + . .+. ++.++.|-.++.
T Consensus 208 ~r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~di~~~g~~~~~~~V~-~~TFGsPRVGN~ 274 (414)
T PLN02454 208 ARSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFDIVENGVSGADIPVT-AIVFGSPQVGNK 274 (414)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHHHHHhcccccCCceE-EEEeCCCcccCH
Confidence 45567777788887776554 99999999999999988642 1 1 223 455666665543
No 191
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.36 E-value=0.008 Score=42.33 Aligned_cols=106 Identities=13% Similarity=0.190 Sum_probs=61.9
Q ss_pred CCCCCcEEEEecCCCCCCCchHHHHHHHHHHhhc-CCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCC--
Q 031716 19 DTSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKAL-DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFP-- 95 (154)
Q Consensus 19 ~~~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~-~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-- 95 (154)
...+.-+|=|+-|..-.+ .+-. .|..+++.|. +||.|++.-|.- +-. ...........+...++.+.+..+
T Consensus 13 P~~P~gvihFiGGaf~ga-~P~i-tYr~lLe~La~~Gy~ViAtPy~~---tfD-H~~~A~~~~~~f~~~~~~L~~~~~~~ 86 (250)
T PF07082_consen 13 PPRPKGVIHFIGGAFVGA-APQI-TYRYLLERLADRGYAVIATPYVV---TFD-HQAIAREVWERFERCLRALQKRGGLD 86 (250)
T ss_pred CCCCCEEEEEcCcceecc-CcHH-HHHHHHHHHHhCCcEEEEEecCC---CCc-HHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 345566677777744333 2222 4777777776 799999987752 100 111122223333334444443321
Q ss_pred --CCeEEEEEeCcchHHHHHHHhhcCccccEEEEecc
Q 031716 96 --GHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGY 130 (154)
Q Consensus 96 --~~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~ 130 (154)
.-+++-+|||+|+-+-+.+...++..-++.++++.
T Consensus 87 ~~~lP~~~vGHSlGcklhlLi~s~~~~~r~gniliSF 123 (250)
T PF07082_consen 87 PAYLPVYGVGHSLGCKLHLLIGSLFDVERAGNILISF 123 (250)
T ss_pred cccCCeeeeecccchHHHHHHhhhccCcccceEEEec
Confidence 13788899999999988888776555566666653
No 192
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=97.35 E-value=0.005 Score=47.64 Aligned_cols=87 Identities=14% Similarity=0.111 Sum_probs=55.9
Q ss_pred HHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCC-CeEEEEEeCcchHHHHHHHhhcCccccE
Q 031716 46 DMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPG-HPLILAGKSMGSRVSCMVACKEDIAASA 124 (154)
Q Consensus 46 ~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~~~i~~ 124 (154)
++-..+..|..|+-+.+.-. ..............+..++.+.+..+. .|.+|+|.++||..++.+|+.+|+.+.-
T Consensus 92 evG~AL~~GHPvYFV~F~p~----P~pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~gp 167 (581)
T PF11339_consen 92 EVGVALRAGHPVYFVGFFPE----PEPGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLVGP 167 (581)
T ss_pred HHHHHHHcCCCeEEEEecCC----CCCCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCccCc
Confidence 34444446888777765421 101111222223334445555544443 3899999999999999999999999999
Q ss_pred EEEeccCccccc
Q 031716 125 VLCLGYPLKVCY 136 (154)
Q Consensus 125 ~v~~~~p~~~~~ 136 (154)
+|+-+.|+....
T Consensus 168 lvlaGaPlsywa 179 (581)
T PF11339_consen 168 LVLAGAPLSYWA 179 (581)
T ss_pred eeecCCCccccc
Confidence 999888875443
No 193
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=97.31 E-value=0.00069 Score=52.85 Aligned_cols=116 Identities=13% Similarity=-0.013 Sum_probs=72.6
Q ss_pred CCCCCCcEEEEec--CCCCCCCchH-HHHHHHH-HHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHh
Q 031716 18 DDTSSSPVVVFAH--GAGAPSSSDW-MIKWKDM-LGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAK 93 (154)
Q Consensus 18 ~~~~~~~~il~lH--G~~~~~~~~~-~~~~~~~-~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~ 93 (154)
.+.++.|+++..+ ...-..+... ....... ..-+.+||.|+..|-||.+.+............+|-.+.|.++.++
T Consensus 40 a~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~~~~~~~E~~Dg~D~I~Wia~Q 119 (563)
T COG2936 40 AGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGVFDPESSREAEDGYDTIEWLAKQ 119 (563)
T ss_pred CCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCcccceeccccccchhHHHHHHHhC
Confidence 3346789999888 3222211111 0011110 0112379999999999975443322221122556777777777765
Q ss_pred -CCCCeEEEEEeCcchHHHHHHHhhcCccccEEEEeccCcc
Q 031716 94 -FPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLK 133 (154)
Q Consensus 94 -~~~~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~~ 133 (154)
....++..+|.|++|...+.+|.++|..+++++-..+...
T Consensus 120 pWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D 160 (563)
T COG2936 120 PWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVD 160 (563)
T ss_pred CccCCeeeeecccHHHHHHHHHHhcCCchheeecccccccc
Confidence 3456899999999999999999998877888876554443
No 194
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=97.24 E-value=0.00037 Score=54.68 Aligned_cols=107 Identities=12% Similarity=-0.013 Sum_probs=71.0
Q ss_pred CCCCcEEEEecCCCCCCCchHHHHHHHHHHh-hcCCeEEEEEcCCCCCCCCCCC-Cc----hHHHHHHHHHHHHHHHHHh
Q 031716 20 TSSSPVVVFAHGAGAPSSSDWMIKWKDMLGK-ALDAVEVVTFDYPYIAGGKRKA-PP----KAEKLVEFHTDVVKGAVAK 93 (154)
Q Consensus 20 ~~~~~~il~lHG~~~~~~~~~~~~~~~~~~~-l~~~~~v~~~d~~g~g~~~~~~-~~----~~~~~~~~~~~~i~~~~~~ 93 (154)
.+++|.+|..+|+-+-+ ..+.|+.-... +..|+.....|-||-|...... .. .-...++|.....+++++.
T Consensus 467 dg~~P~LLygYGay~is---l~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~ 543 (712)
T KOG2237|consen 467 DGSKPLLLYGYGAYGIS---LDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVEN 543 (712)
T ss_pred cCCCceEEEEeccccee---eccccccceeEEEecceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHc
Confidence 44678777666633221 11223322222 2268888888999854222211 11 1234678999999999987
Q ss_pred --CCCCeEEEEEeCcchHHHHHHHhhcCccccEEEEec
Q 031716 94 --FPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLG 129 (154)
Q Consensus 94 --~~~~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~ 129 (154)
...++..+.|.|.||.++.....++|+.+.++++=.
T Consensus 544 gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~V 581 (712)
T KOG2237|consen 544 GYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKV 581 (712)
T ss_pred CCCCccceeEecccCccchhHHHhccCchHhhhhhhcC
Confidence 356799999999999999999999999988887543
No 195
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.18 E-value=0.002 Score=44.65 Aligned_cols=106 Identities=16% Similarity=0.044 Sum_probs=61.3
Q ss_pred CcEEEEecCCCCCCC-chHHHHHHHHHHhhcCCeEEEEEcCCCC--CCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeE
Q 031716 23 SPVVVFAHGAGAPSS-SDWMIKWKDMLGKALDAVEVVTFDYPYI--AGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPL 99 (154)
Q Consensus 23 ~~~il~lHG~~~~~~-~~~~~~~~~~~~~l~~~~~v~~~d~~g~--g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i 99 (154)
+..+||+-|.+...- .+..+.....+.. .+|..+.+..+.+ |.|... .....+|+...+..+...-...+|
T Consensus 36 ~~~vvfiGGLgdgLl~~~y~~~L~~~lde--~~wslVq~q~~Ssy~G~Gt~s----lk~D~edl~~l~~Hi~~~~fSt~v 109 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLYTTMLNRYLDE--NSWSLVQPQLRSSYNGYGTFS----LKDDVEDLKCLLEHIQLCGFSTDV 109 (299)
T ss_pred EEEEEEEcccCCCccccccHHHHHHHHhh--ccceeeeeecccccccccccc----ccccHHHHHHHHHHhhccCcccce
Confidence 355788887765443 3333334444443 7899999986632 111111 122345555555544433334589
Q ss_pred EEEEeCcchHHHHHHHhh--cCccccEEEEeccCccc
Q 031716 100 ILAGKSMGSRVSCMVACK--EDIAASAVLCLGYPLKV 134 (154)
Q Consensus 100 ~l~G~S~Gg~~a~~~a~~--~~~~i~~~v~~~~p~~~ 134 (154)
+|+|||-|..=.+.+..+ .+..+.+.|+.+|.-+.
T Consensus 110 VL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDr 146 (299)
T KOG4840|consen 110 VLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDR 146 (299)
T ss_pred EEEecCccchHHHHHHHhccchHHHHHHHHhCccchh
Confidence 999999999888877743 34556666666554433
No 196
>PLN02934 triacylglycerol lipase
Probab=97.09 E-value=0.0021 Score=49.61 Aligned_cols=58 Identities=12% Similarity=0.147 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEEEeCcchHHHHHHHhh---c--C---ccccEEEEeccCccccch
Q 031716 80 VEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACK---E--D---IAASAVLCLGYPLKVCYY 137 (154)
Q Consensus 80 ~~~~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~---~--~---~~i~~~v~~~~p~~~~~~ 137 (154)
...+.+.++.++++.+..++++.|||+||.+|..++.. + . .++..+..++.|-.+...
T Consensus 304 y~~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~~L~l~~~~~~l~~~~~vYTFGsPRVGN~~ 369 (515)
T PLN02934 304 YYAVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPTVLVLQEETEVMKRLLGVYTFGQPRIGNRQ 369 (515)
T ss_pred HHHHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHHHHHHhcccccccCceEEEEeCCCCccCHH
Confidence 34567777888888888899999999999999988743 1 1 223456777777766543
No 197
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=97.09 E-value=0.0045 Score=48.53 Aligned_cols=106 Identities=18% Similarity=0.204 Sum_probs=64.0
Q ss_pred CCCCcEEEEecCCCCCCCch--HHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHh---C
Q 031716 20 TSSSPVVVFAHGAGAPSSSD--WMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAK---F 94 (154)
Q Consensus 20 ~~~~~~il~lHG~~~~~~~~--~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~---~ 94 (154)
+.++-.|+-+||+|....+. +-...+..... -++.++.+||.-. ..... ....++..-+.-++++. +
T Consensus 393 p~S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~a--L~cPiiSVdYSLA--PEaPF----PRaleEv~fAYcW~inn~all 464 (880)
T KOG4388|consen 393 PRSRSLIVHCHGGGFVAQSSKSHEPYLRSWAQA--LGCPIISVDYSLA--PEAPF----PRALEEVFFAYCWAINNCALL 464 (880)
T ss_pred CCCceEEEEecCCceeeeccccccHHHHHHHHH--hCCCeEEeeeccC--CCCCC----CcHHHHHHHHHHHHhcCHHHh
Confidence 34556788999987654321 11122333333 4899999999763 22222 23345554444555543 2
Q ss_pred --CCCeEEEEEeCcchHHHHHHHhh----cCccccEEEEeccCcc
Q 031716 95 --PGHPLILAGKSMGSRVSCMVACK----EDIAASAVLCLGYPLK 133 (154)
Q Consensus 95 --~~~~i~l~G~S~Gg~~a~~~a~~----~~~~i~~~v~~~~p~~ 133 (154)
-.++|+++|.|.||.+.+.++.+ .-...+|+++.-+|..
T Consensus 465 G~TgEriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~ptl 509 (880)
T KOG4388|consen 465 GSTGERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPPTL 509 (880)
T ss_pred CcccceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecChhh
Confidence 35699999999999987766654 2234677887665553
No 198
>PLN02408 phospholipase A1
Probab=97.06 E-value=0.0024 Score=47.57 Aligned_cols=57 Identities=18% Similarity=0.276 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHhCCCC--eEEEEEeCcchHHHHHHHhhc----Ccc-ccEEEEeccCccccc
Q 031716 80 VEFHTDVVKGAVAKFPGH--PLILAGKSMGSRVSCMVACKE----DIA-ASAVLCLGYPLKVCY 136 (154)
Q Consensus 80 ~~~~~~~i~~~~~~~~~~--~i~l~G~S~Gg~~a~~~a~~~----~~~-i~~~v~~~~p~~~~~ 136 (154)
.+++.+.++.+++..+.. +|++.|||+||.+|...|... +.. .-.++.++.|-.++.
T Consensus 181 r~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl~~~~~~~~~V~v~tFGsPRVGN~ 244 (365)
T PLN02408 181 QEMVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDIKTTFKRAPMVTVISFGGPRVGNR 244 (365)
T ss_pred HHHHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHHHHhcCCCCceEEEEcCCCCcccH
Confidence 345666677777766543 699999999999999888652 221 233566676665554
No 199
>PLN02571 triacylglycerol lipase
Probab=97.00 E-value=0.0033 Score=47.52 Aligned_cols=39 Identities=18% Similarity=0.315 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHHhCCCC--eEEEEEeCcchHHHHHHHhh
Q 031716 79 LVEFHTDVVKGAVAKFPGH--PLILAGKSMGSRVSCMVACK 117 (154)
Q Consensus 79 ~~~~~~~~i~~~~~~~~~~--~i~l~G~S~Gg~~a~~~a~~ 117 (154)
..+++.+.++.+++..+.. +|++.|||+||.+|...|..
T Consensus 206 ar~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 206 ARDQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 3466777777787776543 78999999999999988864
No 200
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=96.91 E-value=0.0041 Score=49.21 Aligned_cols=109 Identities=11% Similarity=0.032 Sum_probs=69.8
Q ss_pred CCCCcEEEEecC-CCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCC-CCCCCCc----hHHHHHHHHHHHHHHHHHh
Q 031716 20 TSSSPVVVFAHG-AGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAG-GKRKAPP----KAEKLVEFHTDVVKGAVAK 93 (154)
Q Consensus 20 ~~~~~~il~lHG-~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~-~~~~~~~----~~~~~~~~~~~~i~~~~~~ 93 (154)
.++.|.++.--| .|.+....|. ...+.-+..|+...+..-||-|. |...+.+ .-..+..|..+..+.+++.
T Consensus 445 ~g~~p~lLygYGaYG~s~~p~Fs---~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~ 521 (682)
T COG1770 445 DGSAPLLLYGYGAYGISMDPSFS---IARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKE 521 (682)
T ss_pred CCCCcEEEEEeccccccCCcCcc---cceeeeecCceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHHc
Confidence 456777777766 3443322221 22233233677666666676331 1111111 1233678888888888876
Q ss_pred C--CCCeEEEEEeCcchHHHHHHHhhcCccccEEEEeccC
Q 031716 94 F--PGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYP 131 (154)
Q Consensus 94 ~--~~~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p 131 (154)
. ..+.+++.|-|+||++...++.+.|+.++++|+-.|-
T Consensus 522 g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPF 561 (682)
T COG1770 522 GYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPF 561 (682)
T ss_pred CcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCc
Confidence 3 4558999999999999999999999999999976543
No 201
>PLN02310 triacylglycerol lipase
Probab=96.87 E-value=0.0041 Score=46.88 Aligned_cols=56 Identities=21% Similarity=0.198 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHhCC----CCeEEEEEeCcchHHHHHHHhh----cCccccEEEEeccCccccc
Q 031716 81 EFHTDVVKGAVAKFP----GHPLILAGKSMGSRVSCMVACK----EDIAASAVLCLGYPLKVCY 136 (154)
Q Consensus 81 ~~~~~~i~~~~~~~~----~~~i~l~G~S~Gg~~a~~~a~~----~~~~i~~~v~~~~p~~~~~ 136 (154)
+++.+.++.+++.++ ..+|.+.|||+||.+|...+.. .+...-.++.++.|-.+..
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~~~~~~~~v~vyTFGsPRVGN~ 252 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAATTIPDLFVSVISFGAPRVGNI 252 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHHHhCcCcceeEEEecCCCcccH
Confidence 455556666665442 3489999999999999988854 2333334667777776654
No 202
>PLN02324 triacylglycerol lipase
Probab=96.80 E-value=0.0058 Score=46.20 Aligned_cols=39 Identities=18% Similarity=0.273 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHhCCC--CeEEEEEeCcchHHHHHHHhh
Q 031716 79 LVEFHTDVVKGAVAKFPG--HPLILAGKSMGSRVSCMVACK 117 (154)
Q Consensus 79 ~~~~~~~~i~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~ 117 (154)
..+++.+.++.+++.++. .+|.+.|||+||.+|...|..
T Consensus 195 areqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 195 AQEQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 345666677778877654 379999999999999988854
No 203
>PLN02802 triacylglycerol lipase
Probab=96.79 E-value=0.0058 Score=47.19 Aligned_cols=57 Identities=25% Similarity=0.304 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHhCCC--CeEEEEEeCcchHHHHHHHhhc----Ccc-ccEEEEeccCccccch
Q 031716 81 EFHTDVVKGAVAKFPG--HPLILAGKSMGSRVSCMVACKE----DIA-ASAVLCLGYPLKVCYY 137 (154)
Q Consensus 81 ~~~~~~i~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~----~~~-i~~~v~~~~p~~~~~~ 137 (154)
+++.+.++.+++.++. .+|++.|||+||.+|...+... ++. ...++.++.|-.++..
T Consensus 312 eqVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL~~~~~~~~pV~vyTFGsPRVGN~a 375 (509)
T PLN02802 312 ESVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADELATCVPAAPPVAVFSFGGPRVGNRA 375 (509)
T ss_pred HHHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHHHHhCCCCCceEEEEcCCCCcccHH
Confidence 4556667777776653 3799999999999999887652 221 1236667777665543
No 204
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=96.68 E-value=0.011 Score=40.88 Aligned_cols=90 Identities=18% Similarity=0.135 Sum_probs=49.2
Q ss_pred CCcEEEEecCCCCCCCchHHH---HHHHHHHhhcCCeEEEEEcCCC------CCCCCC--------------------CC
Q 031716 22 SSPVVVFAHGAGAPSSSDWMI---KWKDMLGKALDAVEVVTFDYPY------IAGGKR--------------------KA 72 (154)
Q Consensus 22 ~~~~il~lHG~~~~~~~~~~~---~~~~~~~~l~~~~~v~~~d~~g------~g~~~~--------------------~~ 72 (154)
.++-|||+||+-.+. ..+.. .|++.+.+ .+..+.+|-|- .-...+ ..
T Consensus 4 ~k~rvLcLHGfrQsg-~~F~~Ktg~~rK~l~k---~~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~ 79 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQSG-KVFSEKTGSLRKLLKK---LAELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNE 79 (230)
T ss_pred CCceEEEecchhhcc-HHHHHHhhhHHHHHHh---hheEEecCCCccCCcccCCcccccccccCCcccccchhhhhcccc
Confidence 356799999998876 44422 34555544 36666666551 000000 00
Q ss_pred -CchHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCcchHHHHHHHh
Q 031716 73 -PPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVAC 116 (154)
Q Consensus 73 -~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~ 116 (154)
........++-.+.+.+.+.+.+.- =.|+|+|+|+.++..++.
T Consensus 80 ~~~~~~~~~eesl~yl~~~i~enGPF-DGllGFSQGA~laa~l~~ 123 (230)
T KOG2551|consen 80 ASFTEYFGFEESLEYLEDYIKENGPF-DGLLGFSQGAALAALLAG 123 (230)
T ss_pred cccccccChHHHHHHHHHHHHHhCCC-ccccccchhHHHHHHhhc
Confidence 0111112334444555555443321 258999999999998887
No 205
>PLN03037 lipase class 3 family protein; Provisional
Probab=96.63 E-value=0.0079 Score=46.61 Aligned_cols=57 Identities=23% Similarity=0.244 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHhCC----CCeEEEEEeCcchHHHHHHHhh----cCcc-ccEEEEeccCccccch
Q 031716 81 EFHTDVVKGAVAKFP----GHPLILAGKSMGSRVSCMVACK----EDIA-ASAVLCLGYPLKVCYY 137 (154)
Q Consensus 81 ~~~~~~i~~~~~~~~----~~~i~l~G~S~Gg~~a~~~a~~----~~~~-i~~~v~~~~p~~~~~~ 137 (154)
+++.+.++.+++.++ ..+|++.|||+||.+|...|.. .++. .-.++.++.|-.++..
T Consensus 298 eQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DIa~~~p~~~~VtvyTFGsPRVGN~a 363 (525)
T PLN03037 298 EQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEAARSVPALSNISVISFGAPRVGNLA 363 (525)
T ss_pred HHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHHHHhCCCCCCeeEEEecCCCccCHH
Confidence 345556666665543 3479999999999999988854 2332 2235566666655543
No 206
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=96.47 E-value=0.0027 Score=47.46 Aligned_cols=89 Identities=18% Similarity=0.191 Sum_probs=47.5
Q ss_pred CCCCcEEEEecCCCC-CCCchHHHHHHHHHHhhc---CCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCC
Q 031716 20 TSSSPVVVFAHGAGA-PSSSDWMIKWKDMLGKAL---DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFP 95 (154)
Q Consensus 20 ~~~~~~il~lHG~~~-~~~~~~~~~~~~~~~~l~---~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 95 (154)
.++...+++.||.-+ +. . .|.+.+.... ++..++.-.+.+. .....++.+..-..+++.+...+....
T Consensus 77 ~k~~HLvVlthGi~~~~~-~----~~~~~~~~~~kk~p~~~iv~~g~~~~---~~~T~~Gv~~lG~Rla~~~~e~~~~~s 148 (405)
T KOG4372|consen 77 TKPKHLVVLTHGLHGADM-E----YWKEKIEQMTKKMPDKLIVVRGKMNN---MCQTFDGVDVLGERLAEEVKETLYDYS 148 (405)
T ss_pred cCCceEEEeccccccccH-H----HHHHHHHhhhcCCCcceEeeeccccc---hhhccccceeeecccHHHHhhhhhccc
Confidence 445678999999887 22 2 3444444433 3343333333321 111112222222334444444444455
Q ss_pred CCeEEEEEeCcchHHHHHHHh
Q 031716 96 GHPLILAGKSMGSRVSCMVAC 116 (154)
Q Consensus 96 ~~~i~l~G~S~Gg~~a~~~a~ 116 (154)
.++|..+|||.||.++..+..
T Consensus 149 i~kISfvghSLGGLvar~AIg 169 (405)
T KOG4372|consen 149 IEKISFVGHSLGGLVARYAIG 169 (405)
T ss_pred cceeeeeeeecCCeeeeEEEE
Confidence 789999999999988764443
No 207
>PLN02719 triacylglycerol lipase
Probab=96.40 E-value=0.014 Score=45.16 Aligned_cols=38 Identities=21% Similarity=0.323 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHhCCC-----CeEEEEEeCcchHHHHHHHhh
Q 031716 80 VEFHTDVVKGAVAKFPG-----HPLILAGKSMGSRVSCMVACK 117 (154)
Q Consensus 80 ~~~~~~~i~~~~~~~~~-----~~i~l~G~S~Gg~~a~~~a~~ 117 (154)
.+++.+.++.+++.++. .+|.+.|||+||.+|...|..
T Consensus 276 ReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 276 REQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 45666777777776542 389999999999999988854
No 208
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=96.25 E-value=0.015 Score=43.21 Aligned_cols=41 Identities=24% Similarity=0.341 Sum_probs=32.4
Q ss_pred CCCeEEEEEeCcchHHHHHHHhhcC-----ccccEEEEeccCcccc
Q 031716 95 PGHPLILAGKSMGSRVSCMVACKED-----IAASAVLCLGYPLKVC 135 (154)
Q Consensus 95 ~~~~i~l~G~S~Gg~~a~~~a~~~~-----~~i~~~v~~~~p~~~~ 135 (154)
+..|+.|+|||+|+.+.+..+.... ..|+.+++++.|....
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~ 263 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSD 263 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCC
Confidence 4558999999999999887766532 2478899999988754
No 209
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=96.24 E-value=0.02 Score=42.51 Aligned_cols=55 Identities=15% Similarity=0.224 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEEeCcchHHHHHHHhh----cC--ccccEEEEeccCcccc
Q 031716 81 EFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACK----ED--IAASAVLCLGYPLKVC 135 (154)
Q Consensus 81 ~~~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~----~~--~~i~~~v~~~~p~~~~ 135 (154)
..+.+.++.+++..+.-+|++.|||+||.+|...|.. .. ....+++..+.|-.+.
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~i~~~~~~~~~~v~v~tFG~PRvGn 215 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALDLVKNGLKTSSPVKVYTFGQPRVGN 215 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHHHHHcCCCCCCceEEEEecCCCccc
Confidence 5666777888888887799999999999999988865 21 1244577777775554
No 210
>PLN02761 lipase class 3 family protein
Probab=96.23 E-value=0.019 Score=44.64 Aligned_cols=38 Identities=21% Similarity=0.254 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHhCC------CCeEEEEEeCcchHHHHHHHhh
Q 031716 80 VEFHTDVVKGAVAKFP------GHPLILAGKSMGSRVSCMVACK 117 (154)
Q Consensus 80 ~~~~~~~i~~~~~~~~------~~~i~l~G~S~Gg~~a~~~a~~ 117 (154)
.+++.+.++.+++.++ ..+|.+.|||+||.+|...|..
T Consensus 271 R~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 271 REQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYD 314 (527)
T ss_pred HHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHH
Confidence 4566667777777652 2379999999999999988853
No 211
>PLN02753 triacylglycerol lipase
Probab=96.18 E-value=0.011 Score=45.99 Aligned_cols=39 Identities=21% Similarity=0.237 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHHhCC-----CCeEEEEEeCcchHHHHHHHhh
Q 031716 79 LVEFHTDVVKGAVAKFP-----GHPLILAGKSMGSRVSCMVACK 117 (154)
Q Consensus 79 ~~~~~~~~i~~~~~~~~-----~~~i~l~G~S~Gg~~a~~~a~~ 117 (154)
..+++.+.++.+++.++ ..+|.+.|||+||.+|...|..
T Consensus 289 ~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 289 AREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 34566667777777653 3489999999999999988853
No 212
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=96.16 E-value=0.067 Score=37.44 Aligned_cols=81 Identities=21% Similarity=0.269 Sum_probs=47.2
Q ss_pred CeEEEEEcCCCCCCC-CCCCCchHHHHHHHHHHHHHHHHHh--CCCCeEEEEEeCcchHHHHHHHhhcCc------cccE
Q 031716 54 AVEVVTFDYPYIAGG-KRKAPPKAEKLVEFHTDVVKGAVAK--FPGHPLILAGKSMGSRVSCMVACKEDI------AASA 124 (154)
Q Consensus 54 ~~~v~~~d~~g~g~~-~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~i~l~G~S~Gg~~a~~~a~~~~~------~i~~ 124 (154)
++.+..++||..-.. ...........+.+=.+.+...++. ...++++++|+|+|+.++...+.+..+ .--.
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~ 81 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLS 81 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceE
Confidence 677788888852110 0001122344455555555555543 145689999999999999988876311 1234
Q ss_pred EEEeccCccc
Q 031716 125 VLCLGYPLKV 134 (154)
Q Consensus 125 ~v~~~~p~~~ 134 (154)
.|+++-|-..
T Consensus 82 fVl~gnP~rp 91 (225)
T PF08237_consen 82 FVLIGNPRRP 91 (225)
T ss_pred EEEecCCCCC
Confidence 6677666544
No 213
>PLN02847 triacylglycerol lipase
Probab=95.99 E-value=0.02 Score=45.16 Aligned_cols=32 Identities=16% Similarity=0.436 Sum_probs=24.9
Q ss_pred HHHHHHHhCCCCeEEEEEeCcchHHHHHHHhh
Q 031716 86 VVKGAVAKFPGHPLILAGKSMGSRVSCMVACK 117 (154)
Q Consensus 86 ~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 117 (154)
.+...+...+.-++++.|||+||.+|..++..
T Consensus 240 ~L~kal~~~PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 240 CLLKALDEYPDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred HHHHHHHHCCCCeEEEeccChHHHHHHHHHHH
Confidence 34444555676799999999999999988765
No 214
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=95.87 E-value=0.095 Score=40.31 Aligned_cols=110 Identities=12% Similarity=0.112 Sum_probs=62.7
Q ss_pred CCCCcEEEEecCCCCCCCchHHHHHHHHHH-------------hhc-------CCeEEEEEcCC-CCCCCCCCCC---ch
Q 031716 20 TSSSPVVVFAHGAGAPSSSDWMIKWKDMLG-------------KAL-------DAVEVVTFDYP-YIAGGKRKAP---PK 75 (154)
Q Consensus 20 ~~~~~~il~lHG~~~~~~~~~~~~~~~~~~-------------~l~-------~~~~v~~~d~~-g~g~~~~~~~---~~ 75 (154)
.+.+|+++++.|+.|.+.... .+.+.-. .+. +...++-+|.| |.|-+..... ..
T Consensus 63 ~~~~P~~lWlnGGPG~SS~~g--~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~ 140 (433)
T PLN03016 63 PKEDPLLIWLNGGPGCSCLGG--IIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMANIIFLDQPVGSGFSYSKTPIDKTG 140 (433)
T ss_pred cccCCEEEEEcCCCcHHHHHH--HHHhcCCceeeccccCCCCCceeeCCCchhhcCcEEEecCCCCCCccCCCCCCCccC
Confidence 456799999999988763110 1111100 010 23677888876 4332211111 11
Q ss_pred HHHHHHHHHHHHHHHHHhC---CCCeEEEEEeCcchHHHHHHHhh----c------CccccEEEEeccC
Q 031716 76 AEKLVEFHTDVVKGAVAKF---PGHPLILAGKSMGSRVSCMVACK----E------DIAASAVLCLGYP 131 (154)
Q Consensus 76 ~~~~~~~~~~~i~~~~~~~---~~~~i~l~G~S~Gg~~a~~~a~~----~------~~~i~~~v~~~~p 131 (154)
....++++.+.++.+.... ...+++|.|.|+||.-+..+|.. + +-.++|+++-++.
T Consensus 141 d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~ 209 (433)
T PLN03016 141 DISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPV 209 (433)
T ss_pred CHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCCC
Confidence 1223467777777777654 44689999999999876666553 2 1246677765543
No 215
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=95.87 E-value=0.069 Score=36.98 Aligned_cols=77 Identities=14% Similarity=0.178 Sum_probs=47.2
Q ss_pred CCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeE-EEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeEE
Q 031716 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVE-VVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLI 100 (154)
Q Consensus 22 ~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~-v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~ 100 (154)
++..||++.|+|.+.. .+..+.. ..++. ++++||+... .+ . + + ...+.|.
T Consensus 10 ~~~LilfF~GWg~d~~-----~f~hL~~--~~~~D~l~~yDYr~l~------~d-----~-~-------~---~~y~~i~ 60 (213)
T PF04301_consen 10 GKELILFFAGWGMDPS-----PFSHLIL--PENYDVLICYDYRDLD------FD-----F-D-------L---SGYREIY 60 (213)
T ss_pred CCeEEEEEecCCCChH-----HhhhccC--CCCccEEEEecCcccc------cc-----c-c-------c---ccCceEE
Confidence 3578999999998763 2333321 23444 4556887531 11 0 0 1 1346899
Q ss_pred EEEeCcchHHHHHHHhhcCccccEEEEec
Q 031716 101 LAGKSMGSRVSCMVACKEDIAASAVLCLG 129 (154)
Q Consensus 101 l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~ 129 (154)
|+++|||-++|..+....+ ++..+.++
T Consensus 61 lvAWSmGVw~A~~~l~~~~--~~~aiAIN 87 (213)
T PF04301_consen 61 LVAWSMGVWAANRVLQGIP--FKRAIAIN 87 (213)
T ss_pred EEEEeHHHHHHHHHhccCC--cceeEEEE
Confidence 9999999999988766543 45555553
No 216
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=95.85 E-value=0.15 Score=35.82 Aligned_cols=100 Identities=12% Similarity=0.108 Sum_probs=59.2
Q ss_pred EEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCC-C--CeEEEE
Q 031716 26 VVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFP-G--HPLILA 102 (154)
Q Consensus 26 il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~--~~i~l~ 102 (154)
+|++=||.+.. ......|.+...+ +|+.++.+-.+-..- - .+. ......++.+...+...+ . .++.+-
T Consensus 2 lvvl~gW~gA~-~~hl~KY~~~Y~~--~g~~il~~~~~~~~~--~-~~~---~~~~~~~~~l~~~l~~~~~~~~~~il~H 72 (240)
T PF05705_consen 2 LVVLLGWMGAK-PKHLAKYSDLYQD--PGFDILLVTSPPADF--F-WPS---KRLAPAADKLLELLSDSQSASPPPILFH 72 (240)
T ss_pred EEEEEeCCCCC-HHHHHHHHHHHHh--cCCeEEEEeCCHHHH--e-eec---cchHHHHHHHHHHhhhhccCCCCCEEEE
Confidence 67777888766 4444457777776 899999987664210 0 011 122333333333333322 2 289999
Q ss_pred EeCcchHHHHHHHhh-----c--C---ccccEEEEeccCccc
Q 031716 103 GKSMGSRVSCMVACK-----E--D---IAASAVLCLGYPLKV 134 (154)
Q Consensus 103 G~S~Gg~~a~~~a~~-----~--~---~~i~~~v~~~~p~~~ 134 (154)
.+|.||...+..... . . .+++++|+-+.|-..
T Consensus 73 ~FSnGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~ 114 (240)
T PF05705_consen 73 SFSNGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIP 114 (240)
T ss_pred EEECchHHHHHHHHHHHHhcccccccccccceeEEeCCCCcc
Confidence 999988887755441 1 1 238889988777543
No 217
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=95.55 E-value=0.056 Score=39.06 Aligned_cols=37 Identities=16% Similarity=0.405 Sum_probs=29.1
Q ss_pred HHHHHHHHHHhCCCCeEEEEEeCcchHHHHHHHhhcC
Q 031716 83 HTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKED 119 (154)
Q Consensus 83 ~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~ 119 (154)
..+.+..+++.++..+|++-|||.||.+|..+...+.
T Consensus 262 ~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 262 ALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HHHHHHHHHHhCCCceEEEeccccchHHHHHhccccC
Confidence 3444445556678889999999999999999988764
No 218
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=95.55 E-value=0.056 Score=39.06 Aligned_cols=37 Identities=16% Similarity=0.405 Sum_probs=29.1
Q ss_pred HHHHHHHHHHhCCCCeEEEEEeCcchHHHHHHHhhcC
Q 031716 83 HTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKED 119 (154)
Q Consensus 83 ~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~ 119 (154)
..+.+..+++.++..+|++-|||.||.+|..+...+.
T Consensus 262 ~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 262 ALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HHHHHHHHHHhCCCceEEEeccccchHHHHHhccccC
Confidence 3444445556678889999999999999999988764
No 219
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=95.39 E-value=0.016 Score=45.64 Aligned_cols=111 Identities=13% Similarity=0.047 Sum_probs=71.6
Q ss_pred CCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCC-----CchHHHHHHHHHHHHHHHHHhC--
Q 031716 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKA-----PPKAEKLVEFHTDVVKGAVAKF-- 94 (154)
Q Consensus 22 ~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~-----~~~~~~~~~~~~~~i~~~~~~~-- 94 (154)
+.|++|+--|+..-+..+....-..+. |.+|...+..+.||-|.-.... -.+-+...+|..++.++++++.
T Consensus 420 ~~pTll~aYGGF~vsltP~fs~~~~~W--LerGg~~v~ANIRGGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~rgit 497 (648)
T COG1505 420 ENPTLLYAYGGFNISLTPRFSGSRKLW--LERGGVFVLANIRGGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLIKRGIT 497 (648)
T ss_pred CCceEEEeccccccccCCccchhhHHH--HhcCCeEEEEecccCCccCHHHHHHHhhhcchhhhHHHHHHHHHHHHhCCC
Confidence 567766665544433333211112222 3368888889999833111111 1123456789999999998872
Q ss_pred CCCeEEEEEeCcchHHHHHHHhhcCccccEEEEeccCcccc
Q 031716 95 PGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKVC 135 (154)
Q Consensus 95 ~~~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~~~~ 135 (154)
..+++.+.|-|-||.+.-....|+|+.+.++||- .|+.++
T Consensus 498 spe~lgi~GgSNGGLLvg~alTQrPelfgA~v~e-vPllDM 537 (648)
T COG1505 498 SPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCE-VPLLDM 537 (648)
T ss_pred CHHHhhhccCCCCceEEEeeeccChhhhCceeec-cchhhh
Confidence 4568999999999999988888999998888854 444433
No 220
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=95.17 E-value=0.27 Score=38.03 Aligned_cols=93 Identities=14% Similarity=0.205 Sum_probs=58.0
Q ss_pred CCCCCcEEEEecCCCCCCCchHHHHHHHHHHhhcC-------------------CeEEEEEcCC-CCCCCC----CCCCc
Q 031716 19 DTSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALD-------------------AVEVVTFDYP-YIAGGK----RKAPP 74 (154)
Q Consensus 19 ~~~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~-------------------~~~v~~~d~~-g~g~~~----~~~~~ 74 (154)
.+..+|+||++.|+.|.+. ..-++.++.+ -..++-.|.| |.|-+. +....
T Consensus 69 ~P~~dPlvLWLnGGPGCSS------l~G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~PvGvGFSYs~~~~~~~~ 142 (454)
T KOG1282|consen 69 NPETDPLVLWLNGGPGCSS------LGGLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQPVGVGFSYSNTSSDYKT 142 (454)
T ss_pred CCCCCCEEEEeCCCCCccc------hhhhhhhcCCeEEcCCCCcceeCCccccccccEEEEecCCcCCccccCCCCcCcC
Confidence 3456899999999998874 2233333221 1345556666 332111 11123
Q ss_pred hHHHHHHHHHHHHHHHHHhC---CCCeEEEEEeCcchHHHHHHHhh
Q 031716 75 KAEKLVEFHTDVVKGAVAKF---PGHPLILAGKSMGSRVSCMVACK 117 (154)
Q Consensus 75 ~~~~~~~~~~~~i~~~~~~~---~~~~i~l~G~S~Gg~~a~~~a~~ 117 (154)
..+...+|..+.++.+.++. ..++++|.|-|++|...-.+|..
T Consensus 143 ~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~ 188 (454)
T KOG1282|consen 143 GDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQE 188 (454)
T ss_pred CcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHH
Confidence 34556678888888887764 56799999999999776666654
No 221
>PLN02209 serine carboxypeptidase
Probab=95.03 E-value=0.3 Score=37.70 Aligned_cols=111 Identities=11% Similarity=0.103 Sum_probs=63.4
Q ss_pred CCCCcEEEEecCCCCCCCchHHHHHHHHH----H---------hhc-------CCeEEEEEcCC-CCCCCCCC---CCch
Q 031716 20 TSSSPVVVFAHGAGAPSSSDWMIKWKDML----G---------KAL-------DAVEVVTFDYP-YIAGGKRK---APPK 75 (154)
Q Consensus 20 ~~~~~~il~lHG~~~~~~~~~~~~~~~~~----~---------~l~-------~~~~v~~~d~~-g~g~~~~~---~~~~ 75 (154)
....|+++++.|+.|.+.... .+.+.- . .+. +...++-+|.| |.|-+... ....
T Consensus 65 ~~~~Pl~lWlnGGPG~SS~~g--~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~ 142 (437)
T PLN02209 65 PQEDPLIIWLNGGPGCSCLSG--LFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYSKTPIERTS 142 (437)
T ss_pred CCCCCEEEEECCCCcHHHhhh--HHHhcCCceeccCCCCCCcccceeCCCchhhcCcEEEecCCCCCCccCCCCCCCccC
Confidence 456799999999988763211 111110 0 010 23567778866 33311111 1111
Q ss_pred HHHHHHHHHHHHHHHHHhC---CCCeEEEEEeCcchHHHHHHHhh----c------CccccEEEEeccCc
Q 031716 76 AEKLVEFHTDVVKGAVAKF---PGHPLILAGKSMGSRVSCMVACK----E------DIAASAVLCLGYPL 132 (154)
Q Consensus 76 ~~~~~~~~~~~i~~~~~~~---~~~~i~l~G~S~Gg~~a~~~a~~----~------~~~i~~~v~~~~p~ 132 (154)
....+++..+.++.+.+.. ...+++|.|.|+||.-+..+|.. + +-.++|+++.++..
T Consensus 143 ~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~t 212 (437)
T PLN02209 143 DTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPIT 212 (437)
T ss_pred CHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCccc
Confidence 2234577788888887664 34589999999999866666543 2 12466777665543
No 222
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=95.02 E-value=0.075 Score=40.26 Aligned_cols=109 Identities=11% Similarity=0.116 Sum_probs=75.6
Q ss_pred CCCCCCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCc----hHHHHHHHHHHHHHHHHHh
Q 031716 18 DDTSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPP----KAEKLVEFHTDVVKGAVAK 93 (154)
Q Consensus 18 ~~~~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~----~~~~~~~~~~~~i~~~~~~ 93 (154)
..+.++|.|+..-|.+.+.. +. ..+...- -+-+-+.+++|.++.+.+...+ .......|....++.++.-
T Consensus 58 Hk~~drPtV~~T~GY~~~~~-p~---r~Ept~L--ld~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~i 131 (448)
T PF05576_consen 58 HKDFDRPTVLYTEGYNVSTS-PR---RSEPTQL--LDGNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPI 131 (448)
T ss_pred EcCCCCCeEEEecCcccccC-cc---ccchhHh--hccceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhh
Confidence 34557899999999887653 22 1222222 3567788999998655543322 2444566777777777665
Q ss_pred CCCCeEEEEEeCcchHHHHHHHhhcCccccEEEEeccCcc
Q 031716 94 FPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLK 133 (154)
Q Consensus 94 ~~~~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~~ 133 (154)
++. +-+--|-|-||+.++.+-.-+|+-+++.|.-..|..
T Consensus 132 Y~~-kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~~ 170 (448)
T PF05576_consen 132 YPG-KWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAPND 170 (448)
T ss_pred ccC-CceecCcCCCceeEEEEeeeCCCCCCeeeeeecccc
Confidence 554 666679999999999888889999999997766653
No 223
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=94.73 E-value=0.25 Score=38.35 Aligned_cols=108 Identities=21% Similarity=0.147 Sum_probs=59.4
Q ss_pred CCCCcEEEEecCCCCCCCchHHHHHHHHHHhhc--------------------CCeEEEEEcCC-CCCCCCC---C---C
Q 031716 20 TSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKAL--------------------DAVEVVTFDYP-YIAGGKR---K---A 72 (154)
Q Consensus 20 ~~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~--------------------~~~~v~~~d~~-g~g~~~~---~---~ 72 (154)
+.++|+++++.|+.|.+.. +-.+.+ +. ..-.++-+|+| |.|-+.. . .
T Consensus 98 p~~rPvi~wlNGGPGcSS~-----~g~l~e-lGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~e~~~d 171 (498)
T COG2939 98 PANRPVIFWLNGGPGCSSV-----TGLLGE-LGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGDEKKKD 171 (498)
T ss_pred CCCCceEEEecCCCChHhh-----hhhhhh-cCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccccccccc
Confidence 4578999999999998742 111111 10 11355566655 3321111 0 1
Q ss_pred CchHHHHHHHHHHHHHHHHHhCCC--CeEEEEEeCcchHHHHHHHhhcC---ccccEEEEeccCcc
Q 031716 73 PPKAEKLVEFHTDVVKGAVAKFPG--HPLILAGKSMGSRVSCMVACKED---IAASAVLCLGYPLK 133 (154)
Q Consensus 73 ~~~~~~~~~~~~~~i~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~~---~~i~~~v~~~~p~~ 133 (154)
.......+....+.+.+...+... .+.+|+|-|+||.-+..+|..-- ...++++.+++.+-
T Consensus 172 ~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvli 237 (498)
T COG2939 172 FEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLI 237 (498)
T ss_pred hhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeee
Confidence 112333344444444444444433 38999999999998888876521 24566666655443
No 224
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.28 E-value=0.2 Score=39.77 Aligned_cols=40 Identities=18% Similarity=0.338 Sum_probs=30.1
Q ss_pred CCeEEEEEeCcchHHHHHHHhh-----cCc------cccEEEEeccCcccc
Q 031716 96 GHPLILAGKSMGSRVSCMVACK-----EDI------AASAVLCLGYPLKVC 135 (154)
Q Consensus 96 ~~~i~l~G~S~Gg~~a~~~a~~-----~~~------~i~~~v~~~~p~~~~ 135 (154)
..+|+.+||||||.++=.+... .|+ ...|+++++.|..+.
T Consensus 525 ~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PHrGS 575 (697)
T KOG2029|consen 525 DRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPHRGS 575 (697)
T ss_pred CCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCCCCC
Confidence 5589999999999887766543 232 467899999888765
No 225
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.11 E-value=0.44 Score=32.00 Aligned_cols=52 Identities=21% Similarity=0.289 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHh-CCCCeEEEEEeCcchHHHHHHHhhcCccccEEEEeccCcc
Q 031716 81 EFHTDVVKGAVAK-FPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLK 133 (154)
Q Consensus 81 ~~~~~~i~~~~~~-~~~~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~~ 133 (154)
+.-.+.-++++++ ++. ...+-|-||||+-|..+..++|+...++|.++....
T Consensus 85 ~rH~AyerYv~eEalpg-s~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYd 137 (227)
T COG4947 85 ERHRAYERYVIEEALPG-STIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYD 137 (227)
T ss_pred HHHHHHHHHHHHhhcCC-CccccccchhhhhhhhhheeChhHhhhheeecceee
Confidence 3334444555554 343 567789999999999999999999999998876543
No 226
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=93.94 E-value=1.1 Score=32.49 Aligned_cols=37 Identities=22% Similarity=0.214 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHhC-CCCeEEEEEeCcchHHHHHHHhh
Q 031716 81 EFHTDVVKGAVAKF-PGHPLILAGKSMGSRVSCMVACK 117 (154)
Q Consensus 81 ~~~~~~i~~~~~~~-~~~~i~l~G~S~Gg~~a~~~a~~ 117 (154)
+.+.+....+.+.+ +.++|+++|+|-|++.|-.++..
T Consensus 75 ~~I~~ay~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 75 ARIRDAYRFLSKNYEPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred HHHHHHHHHHHhccCCcceEEEEecCccHHHHHHHHHH
Confidence 34455555555554 56689999999999999988864
No 227
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=93.69 E-value=0.55 Score=40.74 Aligned_cols=95 Identities=17% Similarity=0.239 Sum_probs=56.8
Q ss_pred CCCCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHh-CCCCe
Q 031716 20 TSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAK-FPGHP 98 (154)
Q Consensus 20 ~~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 98 (154)
....|+++|+|..-+..- .+..+..++ .+..+.+... .. .| ...+++.++.....+++ .+..+
T Consensus 2120 ~se~~~~Ffv~pIEG~tt-----~l~~la~rl--e~PaYglQ~T-----~~-vP---~dSies~A~~yirqirkvQP~GP 2183 (2376)
T KOG1202|consen 2120 QSEEPPLFFVHPIEGFTT-----ALESLASRL--EIPAYGLQCT-----EA-VP---LDSIESLAAYYIRQIRKVQPEGP 2183 (2376)
T ss_pred cccCCceEEEeccccchH-----HHHHHHhhc--CCcchhhhcc-----cc-CC---cchHHHHHHHHHHHHHhcCCCCC
Confidence 345788999999776542 355555553 2222222222 11 11 22355555544333443 46679
Q ss_pred EEEEEeCcchHHHHHHHhhc--CccccEEEEecc
Q 031716 99 LILAGKSMGSRVSCMVACKE--DIAASAVLCLGY 130 (154)
Q Consensus 99 i~l~G~S~Gg~~a~~~a~~~--~~~i~~~v~~~~ 130 (154)
..++|.|+|+.++..++.+. .+..+.+++++.
T Consensus 2184 Yrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDG 2217 (2376)
T KOG1202|consen 2184 YRLAGYSYGACLAFEMASQLQEQQSPAPLILLDG 2217 (2376)
T ss_pred eeeeccchhHHHHHHHHHHHHhhcCCCcEEEecC
Confidence 99999999999999998762 334555777754
No 228
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=93.41 E-value=0.23 Score=38.67 Aligned_cols=88 Identities=16% Similarity=0.047 Sum_probs=56.7
Q ss_pred HHHhhcCCeEEEEEcCCCCCCCCC----CCCch-------HHHHHHHHHHHHHHHHHh---CCCCeEEEEEeCcchHHHH
Q 031716 47 MLGKALDAVEVVTFDYPYIAGGKR----KAPPK-------AEKLVEFHTDVVKGAVAK---FPGHPLILAGKSMGSRVSC 112 (154)
Q Consensus 47 ~~~~l~~~~~v~~~d~~g~g~~~~----~~~~~-------~~~~~~~~~~~i~~~~~~---~~~~~i~l~G~S~Gg~~a~ 112 (154)
+...+..||.+..-|- ||..... ....+ ....+.+....-+.+++. .+.+.-...|.|-||.-++
T Consensus 52 ~~~~~~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl 130 (474)
T PF07519_consen 52 MATALARGYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGL 130 (474)
T ss_pred cchhhhcCeEEEEecC-CCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHH
Confidence 4455668999999984 3321111 01111 111222333344444444 2455788999999999999
Q ss_pred HHHhhcCccccEEEEeccCcccc
Q 031716 113 MVACKEDIAASAVLCLGYPLKVC 135 (154)
Q Consensus 113 ~~a~~~~~~i~~~v~~~~p~~~~ 135 (154)
..|+++|+.++|++.-+|.+...
T Consensus 131 ~~AQryP~dfDGIlAgaPA~~~~ 153 (474)
T PF07519_consen 131 MAAQRYPEDFDGILAGAPAINWT 153 (474)
T ss_pred HHHHhChhhcCeEEeCCchHHHH
Confidence 99999999999999988877544
No 229
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=92.16 E-value=0.81 Score=33.85 Aligned_cols=96 Identities=17% Similarity=0.304 Sum_probs=60.6
Q ss_pred CCCcEEEEecCCCCCCCchHHHHHHHHHHh---hc-------CCeEEEEEcCC-CCC----CCCCCCCchHHHHHHHHHH
Q 031716 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGK---AL-------DAVEVVTFDYP-YIA----GGKRKAPPKAEKLVEFHTD 85 (154)
Q Consensus 21 ~~~~~il~lHG~~~~~~~~~~~~~~~~~~~---l~-------~~~~v~~~d~~-g~g----~~~~~~~~~~~~~~~~~~~ 85 (154)
..+|..+.+.|..+.+..-+ -+|.++-.. +. +...++-+|-| |.| ++++.+.........|+.+
T Consensus 29 s~~pl~lwlqGgpGaSstG~-GNFeE~GPl~~~~~~r~~TWlk~adllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl~~ 107 (414)
T KOG1283|consen 29 SERPLALWLQGGPGASSTGF-GNFEELGPLDLDGSPRDWTWLKDADLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDLVE 107 (414)
T ss_pred cCCCeeEEecCCCCCCCcCc-cchhhcCCcccCCCcCCchhhhhccEEEecCCCcCceeeecCcccccccHHHHHHHHHH
Confidence 45788999999877764322 123333211 11 12467777766 322 3444444444555667777
Q ss_pred HHHHHHHh---CCCCeEEEEEeCcchHHHHHHHhh
Q 031716 86 VVKGAVAK---FPGHPLILAGKSMGSRVSCMVACK 117 (154)
Q Consensus 86 ~i~~~~~~---~~~~~i~l~G~S~Gg~~a~~~a~~ 117 (154)
.++.+... ++..|++|+.-|+||-+|..++..
T Consensus 108 llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~ 142 (414)
T KOG1283|consen 108 LLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALE 142 (414)
T ss_pred HHHHHHhcCccccccceEEEEhhcccchhhhhhhh
Confidence 77777654 355699999999999999988875
No 230
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=91.91 E-value=3.7 Score=29.84 Aligned_cols=82 Identities=18% Similarity=0.185 Sum_probs=50.9
Q ss_pred CCeEEEEEcCCCCCCCCCC--CCchHHHHHHHHHHHHHHHHHhCCC---CeEEEEEeCcchHHHHHHHhh---cCccccE
Q 031716 53 DAVEVVTFDYPYIAGGKRK--APPKAEKLVEFHTDVVKGAVAKFPG---HPLILAGKSMGSRVSCMVACK---EDIAASA 124 (154)
Q Consensus 53 ~~~~v~~~d~~g~g~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~---~~i~l~G~S~Gg~~a~~~a~~---~~~~i~~ 124 (154)
.+..+++..|...-+-.+. ...........+.+.+......++. .|++|.|-|.|++-+...-.. ..+.+++
T Consensus 60 GD~A~va~QYSylPSw~sfl~dr~~a~~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~af~~~~~~~~~vdG 139 (289)
T PF10081_consen 60 GDVAIVAMQYSYLPSWLSFLVDRDAAREAARALFEAVYARWSTLPEDRRPKLYLYGESLGAYGGEAAFDGLDDLRDRVDG 139 (289)
T ss_pred CCeEEEEeccccccchHHHhcccchHHHHHHHHHHHHHHHHHhCCcccCCeEEEeccCccccchhhhhccHHHhhhhcce
Confidence 5789999887653110000 1122333445566666666666543 389999999998766544332 3457999
Q ss_pred EEEeccCccc
Q 031716 125 VLCLGYPLKV 134 (154)
Q Consensus 125 ~v~~~~p~~~ 134 (154)
++..++|...
T Consensus 140 alw~GpP~~s 149 (289)
T PF10081_consen 140 ALWVGPPFFS 149 (289)
T ss_pred EEEeCCCCCC
Confidence 9999988754
No 231
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=91.77 E-value=3.3 Score=32.40 Aligned_cols=104 Identities=19% Similarity=0.213 Sum_probs=65.2
Q ss_pred CCCCCCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEE-cCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCC-
Q 031716 18 DDTSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTF-DYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFP- 95 (154)
Q Consensus 18 ~~~~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~-d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~- 95 (154)
++.-..|..|++.|+-..-+- .-..+++. .++..+.+ |.|-- +|.- +. +....-+.+.+.|+..++.++
T Consensus 284 PGD~KPPL~VYFSGyR~aEGF----Egy~MMk~--Lg~PfLL~~DpRle-GGaF-Yl-Gs~eyE~~I~~~I~~~L~~LgF 354 (511)
T TIGR03712 284 PGDFKPPLNVYFSGYRPAEGF----EGYFMMKR--LGAPFLLIGDPRLE-GGAF-YL-GSDEYEQGIINVIQEKLDYLGF 354 (511)
T ss_pred CcCCCCCeEEeeccCcccCcc----hhHHHHHh--cCCCeEEeeccccc-ccee-ee-CcHHHHHHHHHHHHHHHHHhCC
Confidence 445567889999997765442 23445666 36666665 45432 2222 21 223335677777888887754
Q ss_pred -CCeEEEEEeCcchHHHHHHHhhcCccccEEEEeccCcc
Q 031716 96 -GHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLK 133 (154)
Q Consensus 96 -~~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~~ 133 (154)
.+.++|-|-|||..-|+.++++.. .+++| ++=|+.
T Consensus 355 ~~~qLILSGlSMGTfgAlYYga~l~--P~AIi-VgKPL~ 390 (511)
T TIGR03712 355 DHDQLILSGLSMGTFGALYYGAKLS--PHAII-VGKPLV 390 (511)
T ss_pred CHHHeeeccccccchhhhhhcccCC--CceEE-EcCccc
Confidence 558999999999999999999731 33344 555543
No 232
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=91.72 E-value=4.3 Score=30.23 Aligned_cols=98 Identities=16% Similarity=0.097 Sum_probs=54.8
Q ss_pred CCCCcEEEEecCCCCCCCchHHHHHHHHHHhhc--CCeEEEEEcCCCCCCCCCCCCc-----------h---HHHHHHHH
Q 031716 20 TSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKAL--DAVEVVTFDYPYIAGGKRKAPP-----------K---AEKLVEFH 83 (154)
Q Consensus 20 ~~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~--~~~~v~~~d~~g~g~~~~~~~~-----------~---~~~~~~~~ 83 (154)
...+..|+++-|.--.-+..-..+.-.+.+.++ .+-+++++--+|.|.+.-.... + .....+.+
T Consensus 28 ds~k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI 107 (423)
T COG3673 28 DSMKRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNI 107 (423)
T ss_pred cCcceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHH
Confidence 445678888888332222111012333333333 4567777666776543211100 0 11123344
Q ss_pred HHHHHHHHHhC-CCCeEEEEEeCcchHHHHHHHhh
Q 031716 84 TDVVKGAVAKF-PGHPLILAGKSMGSRVSCMVACK 117 (154)
Q Consensus 84 ~~~i~~~~~~~-~~~~i~l~G~S~Gg~~a~~~a~~ 117 (154)
..+.+-++..+ +.+.|+++|+|-|+.++-.+|..
T Consensus 108 ~~AYrFL~~~yepGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 108 REAYRFLIFNYEPGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHHHHHhcCCCCeEEEeeccchhHHHHHHHHH
Confidence 55555666664 67899999999999999888764
No 233
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=91.56 E-value=1.3 Score=32.64 Aligned_cols=62 Identities=13% Similarity=0.148 Sum_probs=40.0
Q ss_pred EEEEEcCC-CCCCCCCCC---CchHHHHHHHHHHHHHHHHHhC---CCCeEEEEEeCcchHHHHHHHhh
Q 031716 56 EVVTFDYP-YIAGGKRKA---PPKAEKLVEFHTDVVKGAVAKF---PGHPLILAGKSMGSRVSCMVACK 117 (154)
Q Consensus 56 ~v~~~d~~-g~g~~~~~~---~~~~~~~~~~~~~~i~~~~~~~---~~~~i~l~G~S~Gg~~a~~~a~~ 117 (154)
.++-+|.| |.|-+.... .......++++...++.+.++. ...+++|.|-|+||.-+..+|..
T Consensus 3 NvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~ 71 (319)
T PLN02213 3 NIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQE 71 (319)
T ss_pred cEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHH
Confidence 57788988 433121111 1111234478888888888664 45689999999999877766653
No 234
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=91.37 E-value=1.2 Score=32.16 Aligned_cols=104 Identities=12% Similarity=0.105 Sum_probs=58.2
Q ss_pred CCCCCcEEEEecCCCCCCCchHHHHHHH--HHHhh-cCCeEEEEEcCCCCCCCCCCCCchHHHHH---HHHHH----HHH
Q 031716 19 DTSSSPVVVFAHGAGAPSSSDWMIKWKD--MLGKA-LDAVEVVTFDYPYIAGGKRKAPPKAEKLV---EFHTD----VVK 88 (154)
Q Consensus 19 ~~~~~~~il~lHG~~~~~~~~~~~~~~~--~~~~l-~~~~~v~~~d~~g~g~~~~~~~~~~~~~~---~~~~~----~i~ 88 (154)
+++..++.|.+-|-|.... ..+ +...+ ..+...+.++-|.+|... ++.+..... .|+.. .|+
T Consensus 109 PQK~~~KOG~~a~tgdh~y------~rr~~L~~p~~k~~i~tmvle~pfYgqr~--p~~q~~~~Le~vtDlf~mG~A~I~ 180 (371)
T KOG1551|consen 109 PQKMADLCLSWALTGDHVY------TRRLVLSKPINKREIATMVLEKPFYGQRV--PEEQIIHMLEYVTDLFKMGRATIQ 180 (371)
T ss_pred ccCcCCeeEEEeecCCcee------EeeeeecCchhhhcchheeeecccccccC--CHHHHHHHHHHHHHHHHhhHHHHH
Confidence 3445566666666554332 111 11111 157778888888764322 344333222 22222 223
Q ss_pred HHHHh------CCCCeEEEEEeCcchHHHHHHHhhcCccccEEEEecc
Q 031716 89 GAVAK------FPGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGY 130 (154)
Q Consensus 89 ~~~~~------~~~~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~ 130 (154)
..... .+..++.|+|-||||-+|-.+...++..|+-+=++++
T Consensus 181 E~~~lf~Ws~~~g~g~~~~~g~Smgg~~a~~vgS~~q~Pva~~p~l~~ 228 (371)
T KOG1551|consen 181 EFVKLFTWSSADGLGNLNLVGRSMGGDIANQVGSLHQKPVATAPCLNS 228 (371)
T ss_pred HHHHhcccccccCcccceeeeeecccHHHHhhcccCCCCccccccccc
Confidence 32222 2456899999999999999999987766665555544
No 235
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=90.96 E-value=0.56 Score=36.61 Aligned_cols=91 Identities=23% Similarity=0.305 Sum_probs=48.2
Q ss_pred CCCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCC--CC----CCCCCCCchHHHHHHH--HHHHHHHHHH
Q 031716 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPY--IA----GGKRKAPPKAEKLVEF--HTDVVKGAVA 92 (154)
Q Consensus 21 ~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g--~g----~~~~~~~~~~~~~~~~--~~~~i~~~~~ 92 (154)
.+..++|++-|+|--++++-..-|.--+-...++..|+.++||- +| .+.+..+-+ ....++ ...++++-+.
T Consensus 133 ~n~tVlVWiyGGGF~sGt~SLdvYdGk~la~~envIvVs~NYRvG~FGFL~l~~~~eaPGN-mGl~DQqLAl~WV~~Ni~ 211 (601)
T KOG4389|consen 133 YNLTVLVWIYGGGFYSGTPSLDVYDGKFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPGN-MGLLDQQLALQWVQENIA 211 (601)
T ss_pred CCceEEEEEEcCccccCCcceeeeccceeeeeccEEEEEeeeeeccceEEecCCCCCCCCc-cchHHHHHHHHHHHHhHH
Confidence 34558889988776666443322222111122678888888872 11 122222222 112222 2233444444
Q ss_pred hC--CCCeEEEEEeCcchHHHH
Q 031716 93 KF--PGHPLILAGKSMGSRVSC 112 (154)
Q Consensus 93 ~~--~~~~i~l~G~S~Gg~~a~ 112 (154)
.. +.+++.|+|-|+|+....
T Consensus 212 aFGGnp~~vTLFGESAGaASv~ 233 (601)
T KOG4389|consen 212 AFGGNPSRVTLFGESAGAASVV 233 (601)
T ss_pred HhCCCcceEEEeccccchhhhh
Confidence 44 345899999999986544
No 236
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=90.44 E-value=4.2 Score=29.93 Aligned_cols=107 Identities=11% Similarity=0.048 Sum_probs=68.4
Q ss_pred CCCCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeE
Q 031716 20 TSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPL 99 (154)
Q Consensus 20 ~~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i 99 (154)
..+.|.++++-...|...+ ..+...+.+-+...|++.||.... .- +........+|+.+.+..++..++.+ +
T Consensus 100 r~pdPkvLivapmsGH~aT----LLR~TV~alLp~~~vyitDW~dAr--~V-p~~~G~FdldDYIdyvie~~~~~Gp~-~ 171 (415)
T COG4553 100 RKPDPKVLIVAPMSGHYAT----LLRGTVEALLPYHDVYITDWVDAR--MV-PLEAGHFDLDDYIDYVIEMINFLGPD-A 171 (415)
T ss_pred cCCCCeEEEEecccccHHH----HHHHHHHHhccccceeEeeccccc--ee-ecccCCccHHHHHHHHHHHHHHhCCC-C
Confidence 3456677777776654321 355566666678899999987531 11 11222345788999988888887764 5
Q ss_pred EEEEeCcch-----HHHHHHHhhcCccccEEEEeccCccc
Q 031716 100 ILAGKSMGS-----RVSCMVACKEDIAASAVLCLGYPLKV 134 (154)
Q Consensus 100 ~l~G~S~Gg-----~~a~~~a~~~~~~i~~~v~~~~p~~~ 134 (154)
.+++.++=+ .++++.+...|.......+++.|.+.
T Consensus 172 hv~aVCQP~vPvLAAisLM~~~~~p~~PssMtlmGgPIDa 211 (415)
T COG4553 172 HVMAVCQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPIDA 211 (415)
T ss_pred cEEEEecCCchHHHHHHHHHhcCCCCCCceeeeecCcccc
Confidence 556655543 34444445567778889999888754
No 237
>PRK12467 peptide synthase; Provisional
Probab=89.49 E-value=5.1 Score=39.50 Aligned_cols=99 Identities=12% Similarity=0.059 Sum_probs=58.7
Q ss_pred CCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeEEE
Q 031716 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLIL 101 (154)
Q Consensus 22 ~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l 101 (154)
..+.+++.|...++.. .+..+...+..+..++.+..++...... ...........+.+.+++. .+..+..+
T Consensus 3691 ~~~~l~~~h~~~r~~~-----~~~~l~~~l~~~~~~~~l~~~~~~~d~~-~~~~~~~~~~~y~~~~~~~---~~~~p~~l 3761 (3956)
T PRK12467 3691 GFPALFCRHEGLGTVF-----DYEPLAVILEGDRHVLGLTCRHLLDDGW-QDTSLQAMAVQYADYILWQ---QAKGPYGL 3761 (3956)
T ss_pred cccceeeechhhcchh-----hhHHHHHHhCCCCcEEEEeccccccccC-CccchHHHHHHHHHHHHHh---ccCCCeee
Confidence 3456999999887653 2344444444567778877665421111 2222333344455444333 34457899
Q ss_pred EEeCcchHHHHHHHhh---cCccccEEEEec
Q 031716 102 AGKSMGSRVSCMVACK---EDIAASAVLCLG 129 (154)
Q Consensus 102 ~G~S~Gg~~a~~~a~~---~~~~i~~~v~~~ 129 (154)
.|+|+||.++..++.+ ..+.+.-+.++.
T Consensus 3762 ~g~s~g~~~a~~~~~~l~~~g~~~~~~~~~~ 3792 (3956)
T PRK12467 3762 LGWSLGGTLARLVAELLEREGESEAFLGLFD 3792 (3956)
T ss_pred eeeecchHHHHHHHHHHHHcCCceeEEEEEe
Confidence 9999999999988875 344455444543
No 238
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=89.29 E-value=1.7 Score=34.20 Aligned_cols=47 Identities=28% Similarity=0.299 Sum_probs=34.8
Q ss_pred CCCCeEEEEEeCcchHHHHHHHhh-----cCccccEEEEeccCccccchhhe
Q 031716 94 FPGHPLILAGKSMGSRVSCMVACK-----EDIAASAVLCLGYPLKVCYYLCL 140 (154)
Q Consensus 94 ~~~~~i~l~G~S~Gg~~a~~~a~~-----~~~~i~~~v~~~~p~~~~~~~~~ 140 (154)
.+..||.|+|+|.|+.+-..-... .-..|..+++++.|.......+.
T Consensus 444 qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k~~~w~ 495 (633)
T KOG2385|consen 444 QGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTKAKLWL 495 (633)
T ss_pred cCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCCHHHHH
Confidence 456799999999999998754442 23468889999999876654433
No 239
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=87.24 E-value=6.7 Score=29.48 Aligned_cols=109 Identities=10% Similarity=0.066 Sum_probs=59.1
Q ss_pred CCCCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhC--CCC
Q 031716 20 TSSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKF--PGH 97 (154)
Q Consensus 20 ~~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~ 97 (154)
+....+|+++=||.+..+. +...+....+. .|+.++.+..|-+-..-. ..............+..++... ...
T Consensus 35 ~~s~k~Iv~~~gWag~~~r-~l~ky~~~Yq~--~g~~~~~~tap~~~~~~~--~s~~~~sl~~~~~~l~~L~~~~~~~~~ 109 (350)
T KOG2521|consen 35 GESEKPIVVLLGWAGAIDR-NLMKYSKIYQD--KGYIVVRITAPCPSVFLS--ASRRILSLSLASTRLSELLSDYNSDPC 109 (350)
T ss_pred CCccccEEEEeeeccccch-hHHHHHHHHhc--CCceEEEecCcccccccc--cccccchhhHHHHHHHHHhhhccCCcC
Confidence 3444356666677766644 54456666665 799999988775321111 1111112223333444444433 355
Q ss_pred eEEEEEeCcchHHHHHHH---hh-c-C---ccccEEEEeccCcc
Q 031716 98 PLILAGKSMGSRVSCMVA---CK-E-D---IAASAVLCLGYPLK 133 (154)
Q Consensus 98 ~i~l~G~S~Gg~~a~~~a---~~-~-~---~~i~~~v~~~~p~~ 133 (154)
++++--+|+||...+... .. + | +...++++.+-|..
T Consensus 110 pi~fh~FS~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~~ 153 (350)
T KOG2521|consen 110 PIIFHVFSGNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPAR 153 (350)
T ss_pred ceEEEEecCCceeehHHHHHHHhhcCchhHhhcCCceEeccccc
Confidence 888889999997766443 11 2 2 24555666655544
No 240
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=87.21 E-value=0.6 Score=25.75 Aligned_cols=17 Identities=29% Similarity=0.452 Sum_probs=9.1
Q ss_pred CCCCcEEEEecCCCCCC
Q 031716 20 TSSSPVVVFAHGAGAPS 36 (154)
Q Consensus 20 ~~~~~~il~lHG~~~~~ 36 (154)
...+|+|++.||..+++
T Consensus 40 ~~~k~pVll~HGL~~ss 56 (63)
T PF04083_consen 40 NKKKPPVLLQHGLLQSS 56 (63)
T ss_dssp TTT--EEEEE--TT--G
T ss_pred CCCCCcEEEECCcccCh
Confidence 45789999999999887
No 241
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=84.51 E-value=0.48 Score=29.39 Aligned_cols=18 Identities=11% Similarity=0.154 Sum_probs=9.5
Q ss_pred CCCCCcEEEEecCCCCCC
Q 031716 19 DTSSSPVVVFAHGAGAPS 36 (154)
Q Consensus 19 ~~~~~~~il~lHG~~~~~ 36 (154)
...+..++|++||+.|+-
T Consensus 88 ~~~~aiPLll~HGWPgSf 105 (112)
T PF06441_consen 88 KRPNAIPLLLLHGWPGSF 105 (112)
T ss_dssp S-TT-EEEEEE--SS--G
T ss_pred CCCCCeEEEEECCCCccH
Confidence 345667899999999875
No 242
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=84.43 E-value=8.3 Score=24.54 Aligned_cols=29 Identities=14% Similarity=0.068 Sum_probs=19.5
Q ss_pred CCCCCcEEEEecCCCCCCCchHHHHHHHH
Q 031716 19 DTSSSPVVVFAHGAGAPSSSDWMIKWKDM 47 (154)
Q Consensus 19 ~~~~~~~il~lHG~~~~~~~~~~~~~~~~ 47 (154)
...++|.|+-+||+.|+..+......++.
T Consensus 48 ~~p~KpLVlSfHG~tGtGKn~v~~liA~~ 76 (127)
T PF06309_consen 48 PNPRKPLVLSFHGWTGTGKNFVSRLIAEH 76 (127)
T ss_pred CCCCCCEEEEeecCCCCcHHHHHHHHHHH
Confidence 35678999999999998754333333333
No 243
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=82.52 E-value=6.8 Score=23.77 Aligned_cols=44 Identities=20% Similarity=0.244 Sum_probs=32.4
Q ss_pred HHHHHHHHHhCCCCeEEEEEeCcch--HHHHHHHhhcCccccEEEE
Q 031716 84 TDVVKGAVAKFPGHPLILAGKSMGS--RVSCMVACKEDIAASAVLC 127 (154)
Q Consensus 84 ~~~i~~~~~~~~~~~i~l~G~S~Gg--~~a~~~a~~~~~~i~~~v~ 127 (154)
.+.++.+++..+..+++|+|-|-=. -+-..++.++|++|.++.+
T Consensus 52 ~~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~~~P~~i~ai~I 97 (100)
T PF09949_consen 52 RDNIERILRDFPERKFILIGDSGQHDPEIYAEIARRFPGRILAIYI 97 (100)
T ss_pred HHHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHHHCCCCEEEEEE
Confidence 3456677777888999999998543 3444677789999887753
No 244
>PF03283 PAE: Pectinacetylesterase
Probab=78.14 E-value=7.5 Score=29.37 Aligned_cols=36 Identities=17% Similarity=0.213 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHh-C-CCCeEEEEEeCcchHHHHHHHhh
Q 031716 82 FHTDVVKGAVAK-F-PGHPLILAGKSMGSRVSCMVACK 117 (154)
Q Consensus 82 ~~~~~i~~~~~~-~-~~~~i~l~G~S~Gg~~a~~~a~~ 117 (154)
.+.+++++++++ + +.++++|.|.|+||.-++..+..
T Consensus 139 i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~d~ 176 (361)
T PF03283_consen 139 ILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHADY 176 (361)
T ss_pred HHHHHHHHHHHhcCcccceEEEeccChHHHHHHHHHHH
Confidence 345556666665 3 35689999999999988866644
No 245
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=73.75 E-value=14 Score=29.87 Aligned_cols=63 Identities=10% Similarity=0.204 Sum_probs=38.6
Q ss_pred CCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeEEEEEe------CcchHHHHHHHhhcCccccEEEEec
Q 031716 64 YIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGK------SMGSRVSCMVACKEDIAASAVLCLG 129 (154)
Q Consensus 64 g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~G~------S~Gg~~a~~~a~~~~~~i~~~v~~~ 129 (154)
.+|+++.............+..++++.+.. .++++++|| +.|+.+++..-+..-++ .+-+.++
T Consensus 307 fyGG~s~~~ekrTRvRaRvis~al~d~i~e--~d~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~d 375 (655)
T COG3887 307 FYGGKSNPMEKRTRVRARVISTALSDIIKE--SDNVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLD 375 (655)
T ss_pred eeCCCcchhHHhHHHHHHHHHHHHHHHHhh--cCcEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEEC
Confidence 454444433333444556666777777665 568999999 67999988666554343 3444444
No 246
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=71.01 E-value=15 Score=21.17 Aligned_cols=40 Identities=10% Similarity=0.082 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHHh---CCCCeEEEEEeCcchHHHHHHHhhc
Q 031716 79 LVEFHTDVVKGAVAK---FPGHPLILAGKSMGSRVSCMVACKE 118 (154)
Q Consensus 79 ~~~~~~~~i~~~~~~---~~~~~i~l~G~S~Gg~~a~~~a~~~ 118 (154)
+.+.+.+.+++...+ .+.+++.++|-|-|=.+|...+..+
T Consensus 19 C~~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 19 CARNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp HHHHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHHHHh
Confidence 344445555555543 3446899999999988887776654
No 247
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=70.87 E-value=37 Score=25.33 Aligned_cols=31 Identities=16% Similarity=0.077 Sum_probs=20.6
Q ss_pred CCCCCcEEEEecCCCCCCCchHHHHHHHHHH
Q 031716 19 DTSSSPVVVFAHGAGAPSSSDWMIKWKDMLG 49 (154)
Q Consensus 19 ~~~~~~~il~lHG~~~~~~~~~~~~~~~~~~ 49 (154)
+...+|.++=+||+.|+..+...+..++.+.
T Consensus 105 ~~p~KPLvLSfHG~tGTGKN~Va~iiA~n~~ 135 (344)
T KOG2170|consen 105 PNPRKPLVLSFHGWTGTGKNYVAEIIAENLY 135 (344)
T ss_pred CCCCCCeEEEecCCCCCchhHHHHHHHHHHH
Confidence 4457899999999999876543333344333
No 248
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=69.14 E-value=26 Score=23.20 Aligned_cols=49 Identities=12% Similarity=0.010 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHhC--CCCeEEEEEeCcchHHHHHHHhhcCccccEEEE
Q 031716 79 LVEFHTDVVKGAVAKF--PGHPLILAGKSMGSRVSCMVACKEDIAASAVLC 127 (154)
Q Consensus 79 ~~~~~~~~i~~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~ 127 (154)
.++...+.+..+++.. ..++|.++|-|..|..-+.++...++.++.++=
T Consensus 49 ~~~~~~~~l~~~L~~~~~~gk~I~~yGA~~kg~tlln~~g~~~~~I~~vvD 99 (160)
T PF08484_consen 49 RVEQSKAELREFLEKLKAEGKRIAGYGAGAKGNTLLNYFGLDNDLIDYVVD 99 (160)
T ss_dssp HHHHHHHHHHHHHHHHHHTT--EEEE---SHHHHHHHHHT--TTTS--EEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCEEEEECcchHHHHHHHHhCCCcceeEEEEe
Confidence 3444444444444322 456899999999999888888765666776663
No 249
>PRK10824 glutaredoxin-4; Provisional
Probab=68.80 E-value=26 Score=21.87 Aligned_cols=81 Identities=10% Similarity=0.049 Sum_probs=50.4
Q ss_pred CCCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeEE
Q 031716 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLI 100 (154)
Q Consensus 21 ~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~ 100 (154)
...+++||..|......+++.....+++..+.-.|.++-++- + .++.+.+.......-..+|+
T Consensus 13 ~~~~Vvvf~Kg~~~~p~Cpyc~~ak~lL~~~~i~~~~idi~~-----------d------~~~~~~l~~~sg~~TVPQIF 75 (115)
T PRK10824 13 AENPILLYMKGSPKLPSCGFSAQAVQALSACGERFAYVDILQ-----------N------PDIRAELPKYANWPTFPQLW 75 (115)
T ss_pred hcCCEEEEECCCCCCCCCchHHHHHHHHHHcCCCceEEEecC-----------C------HHHHHHHHHHhCCCCCCeEE
Confidence 357899999987766667666667777777544455543321 0 12333333333333345899
Q ss_pred EEEeCcchHHHHHHHhhc
Q 031716 101 LAGKSMGSRVSCMVACKE 118 (154)
Q Consensus 101 l~G~S~Gg~~a~~~a~~~ 118 (154)
|-|...||+--+..+.+.
T Consensus 76 I~G~~IGG~ddl~~l~~~ 93 (115)
T PRK10824 76 VDGELVGGCDIVIEMYQR 93 (115)
T ss_pred ECCEEEcChHHHHHHHHC
Confidence 999999999777666553
No 250
>PF02590 SPOUT_MTase: Predicted SPOUT methyltransferase; InterPro: IPR003742 This family of proteins are predicted to be SPOUT methyltransferases []. ; GO: 0008168 methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1VH0_E 4FAK_A 1TO0_G 1O6D_A 1NS5_B.
Probab=68.47 E-value=20 Score=23.63 Aligned_cols=53 Identities=13% Similarity=0.016 Sum_probs=33.2
Q ss_pred HHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCcc
Q 031716 44 WKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMG 107 (154)
Q Consensus 44 ~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~G~S~G 107 (154)
..+++..+..+..+++.|-.|- ..+..++++.+..+......+-++++|-+.|
T Consensus 57 ~~~il~~i~~~~~~i~Ld~~Gk-----------~~sS~~fA~~l~~~~~~g~~~i~F~IGG~~G 109 (155)
T PF02590_consen 57 GERILKKIPPNDYVILLDERGK-----------QLSSEEFAKKLERWMNQGKSDIVFIIGGADG 109 (155)
T ss_dssp HHHHHCTSHTTSEEEEE-TTSE-----------E--HHHHHHHHHHHHHTTS-EEEEEE-BTTB
T ss_pred HHHHHhhccCCCEEEEEcCCCc-----------cCChHHHHHHHHHHHhcCCceEEEEEecCCC
Confidence 3455555556677788888773 2234778888888877644456778899998
No 251
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=67.13 E-value=27 Score=23.06 Aligned_cols=59 Identities=15% Similarity=0.014 Sum_probs=39.6
Q ss_pred HHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCcchHHHHH
Q 031716 43 KWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCM 113 (154)
Q Consensus 43 ~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~ 113 (154)
.-.+++..+.++-.+++.|.+|- . ...+++++.++.+.+.. .+=.+++|-|.|=--++.
T Consensus 56 E~~~il~~i~~~~~vi~Ld~~Gk--~---------~sSe~fA~~l~~~~~~G-~~i~f~IGG~~Gl~~~~~ 114 (155)
T COG1576 56 EGEAILAAIPKGSYVVLLDIRGK--A---------LSSEEFADFLERLRDDG-RDISFLIGGADGLSEAVK 114 (155)
T ss_pred HHHHHHHhcCCCCeEEEEecCCC--c---------CChHHHHHHHHHHHhcC-CeEEEEEeCcccCCHHHH
Confidence 45667777778889999999883 1 12366777777776654 445677899988544443
No 252
>COG4425 Predicted membrane protein [Function unknown]
Probab=65.27 E-value=49 Score=26.14 Aligned_cols=80 Identities=21% Similarity=0.249 Sum_probs=46.3
Q ss_pred CCeEEEEEcCCCCCC---CCCCCCchHHHHHHHHHHHHHHHHHhCCC---CeEEEEEeCcchHHHHHHHhh----cCccc
Q 031716 53 DAVEVVTFDYPYIAG---GKRKAPPKAEKLVEFHTDVVKGAVAKFPG---HPLILAGKSMGSRVSCMVACK----EDIAA 122 (154)
Q Consensus 53 ~~~~v~~~d~~g~g~---~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~i~l~G~S~Gg~~a~~~a~~----~~~~i 122 (154)
.++..++..|.+.-+ -.. .++...+..+.+.+++....++++. .|++|.|-|.|++-....... -.+ .
T Consensus 348 Gd~asVsmQYSyL~SwLSllv-dpdyg~~aa~aLf~aVy~yw~qLP~~sRPKLylhG~SLGa~~s~~~s~dl~dvl~d-f 425 (588)
T COG4425 348 GDVASVSMQYSYLPSWLSLLV-DPDYGADAARALFEAVYGYWTQLPKSSRPKLYLHGESLGAMGSEAPSMDLFDVLGD-F 425 (588)
T ss_pred CceEEEEEehhhHHHHHHHhc-CCCcchhHHHHHHHHHHHHHHhCCcCCCCceEEeccccccccCccccccHHHHHhh-c
Confidence 456666666553210 001 1222333455666666666666543 389999999999765542211 233 7
Q ss_pred cEEEEeccCccc
Q 031716 123 SAVLCLGYPLKV 134 (154)
Q Consensus 123 ~~~v~~~~p~~~ 134 (154)
+|+...++|+..
T Consensus 426 dGaLwSGppf~s 437 (588)
T COG4425 426 DGALWSGPPFNS 437 (588)
T ss_pred ccceecCCCCCc
Confidence 888888888754
No 253
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=64.32 E-value=6.7 Score=28.82 Aligned_cols=28 Identities=18% Similarity=0.240 Sum_probs=21.4
Q ss_pred HHHHhCCCCeEEEEEeCcchHHHHHHHh
Q 031716 89 GAVAKFPGHPLILAGKSMGSRVSCMVAC 116 (154)
Q Consensus 89 ~~~~~~~~~~i~l~G~S~Gg~~a~~~a~ 116 (154)
.+++..+..+-.++|||+|=+.|+.++.
T Consensus 76 ~~l~~~Gi~P~~v~GhSlGE~aA~~aaG 103 (318)
T PF00698_consen 76 RLLRSWGIKPDAVIGHSLGEYAALVAAG 103 (318)
T ss_dssp HHHHHTTHCESEEEESTTHHHHHHHHTT
T ss_pred hhhcccccccceeeccchhhHHHHHHCC
Confidence 3345567788899999999988886653
No 254
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=63.54 E-value=11 Score=27.16 Aligned_cols=25 Identities=24% Similarity=0.340 Sum_probs=20.1
Q ss_pred HhCCCCeEEEEEeCcchHHHHHHHh
Q 031716 92 AKFPGHPLILAGKSMGSRVSCMVAC 116 (154)
Q Consensus 92 ~~~~~~~i~l~G~S~Gg~~a~~~a~ 116 (154)
+..+..+-.++|||.|-+.|+.++.
T Consensus 77 ~~~Gi~p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 77 RSWGVRPDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHcCCcccEEEecCHHHHHHHHHhC
Confidence 4567778899999999988877664
No 255
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=62.52 E-value=12 Score=27.08 Aligned_cols=25 Identities=28% Similarity=0.353 Sum_probs=19.8
Q ss_pred HhCCCCeEEEEEeCcchHHHHHHHh
Q 031716 92 AKFPGHPLILAGKSMGSRVSCMVAC 116 (154)
Q Consensus 92 ~~~~~~~i~l~G~S~Gg~~a~~~a~ 116 (154)
+..+..+..++|||+|=+.|..++.
T Consensus 71 ~~~g~~P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 71 LALLPRPSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred HhcCCCCcEEeecCHHHHHHHHHhC
Confidence 4456678899999999988887663
No 256
>PF00091 Tubulin: Tubulin/FtsZ family, GTPase domain; InterPro: IPR003008 This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.; GO: 0051258 protein polymerization, 0043234 protein complex; PDB: 3E22_B 1SA1_D 3DU7_B 2P4N_B 3DCO_B 1Z2B_D 1SA0_B 2XRP_C 1TVK_B 2BTQ_B ....
Probab=61.86 E-value=37 Score=23.44 Aligned_cols=33 Identities=12% Similarity=0.121 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHHhCCCCeEEEEEeCcchHHH
Q 031716 79 LVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVS 111 (154)
Q Consensus 79 ~~~~~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a 111 (154)
..++..+.++..++..+.-..+++-||+||..+
T Consensus 106 ~~~~~~~~ir~~~e~~d~~~~~~i~~slgGGTG 138 (216)
T PF00091_consen 106 ALEEILEQIRKEIEKCDSLDGFFIVHSLGGGTG 138 (216)
T ss_dssp HHHHHHHHHHHHHHTSTTESEEEEEEESSSSHH
T ss_pred cccccccccchhhccccccccceecccccceec
Confidence 455666677777766666678889999988753
No 257
>COG3933 Transcriptional antiterminator [Transcription]
Probab=61.25 E-value=60 Score=25.48 Aligned_cols=78 Identities=18% Similarity=0.125 Sum_probs=51.2
Q ss_pred CCCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeEE
Q 031716 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLI 100 (154)
Q Consensus 21 ~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~ 100 (154)
+...+||..||....+ ..+.+..++-..-.+.++|.|-- ....++.+.+.+.+++.+..+=.
T Consensus 107 ~~v~vIiiAHG~sTAS------SmaevanrLL~~~~~~aiDMPLd------------vsp~~vle~l~e~~k~~~~~~Gl 168 (470)
T COG3933 107 PRVKVIIIAHGYSTAS------SMAEVANRLLGEEIFIAIDMPLD------------VSPSDVLEKLKEYLKERDYRSGL 168 (470)
T ss_pred CceeEEEEecCcchHH------HHHHHHHHHhhccceeeecCCCc------------CCHHHHHHHHHHHHHhcCccCce
Confidence 4457899999977654 47778877777788999999962 12345555555555555544433
Q ss_pred EEEeCcchHHHHHHHh
Q 031716 101 LAGKSMGSRVSCMVAC 116 (154)
Q Consensus 101 l~G~S~Gg~~a~~~a~ 116 (154)
++=-.||...+..-..
T Consensus 169 llLVDMGSL~~f~~~i 184 (470)
T COG3933 169 LLLVDMGSLTSFGSII 184 (470)
T ss_pred EEEEecchHHHHHHHH
Confidence 4445899877664443
No 258
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=60.32 E-value=16 Score=24.18 Aligned_cols=34 Identities=26% Similarity=0.288 Sum_probs=24.8
Q ss_pred HHHHHHHHHhCCCCeEEEEEeCcchHHHHHHHhhc
Q 031716 84 TDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKE 118 (154)
Q Consensus 84 ~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 118 (154)
+.+++.+.++ +...-.+.|-|+|+.++..++...
T Consensus 14 ~Gvl~aL~e~-gi~~d~v~GtSaGAi~aa~~a~g~ 47 (172)
T cd07198 14 VGVAKALRER-GPLIDIIAGTSAGAIVAALLASGR 47 (172)
T ss_pred HHHHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCC
Confidence 3455555554 444667899999999999999863
No 259
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism]
Probab=59.83 E-value=66 Score=23.54 Aligned_cols=100 Identities=14% Similarity=0.009 Sum_probs=48.7
Q ss_pred ecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEc------CCCCCCCCCCCCchHHHHHHHHHHHHHHHHH--hCCCCeEE
Q 031716 29 AHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFD------YPYIAGGKRKAPPKAEKLVEFHTDVVKGAVA--KFPGHPLI 100 (154)
Q Consensus 29 lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d------~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~i~ 100 (154)
.||.-|++. -...++. .|++|..+. ++|+|.-..... ..+++.+.++.+.+ ....-..+
T Consensus 11 v~G~vGn~A------A~f~lq~--~G~~V~~vpTV~fSnHtgyg~~~g~v~-----~~e~l~~~l~~l~~~~~~~~~dav 77 (281)
T COG2240 11 VYGSVGNSA------AIFPLQR--LGLDVWAVPTVQFSNHTGYGKWTGIVM-----PPEQLADLLNGLEAIDKLGECDAV 77 (281)
T ss_pred eecccccHh------HHHHHHH--cCCceeeeceEEecCCCCCCCCCCcCC-----CHHHHHHHHHHHHhcccccccCEE
Confidence 567666653 2333444 577766653 666543222111 12344444444443 22333455
Q ss_pred EEEe----CcchHHHHHHHhhcCccccEEEEeccCccccchhhee
Q 031716 101 LAGK----SMGSRVSCMVACKEDIAASAVLCLGYPLKVCYYLCLS 141 (154)
Q Consensus 101 l~G~----S~Gg~~a~~~a~~~~~~i~~~v~~~~p~~~~~~~~~~ 141 (154)
+-|. ..+-.++-.+.+...+..+.+++++|...+...++-.
T Consensus 78 ltGYlgs~~qv~~i~~~v~~vk~~~P~~~~l~DPVMGD~gglYV~ 122 (281)
T COG2240 78 LTGYLGSAEQVRAIAGIVKAVKEANPNALYLCDPVMGDPGGLYVA 122 (281)
T ss_pred EEccCCCHHHHHHHHHHHHHHhccCCCeEEEeCCcccCCCceeec
Confidence 5554 3333333333333333456778888877665544433
No 260
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=58.82 E-value=14 Score=26.51 Aligned_cols=24 Identities=25% Similarity=0.237 Sum_probs=18.9
Q ss_pred hCC-CCeEEEEEeCcchHHHHHHHh
Q 031716 93 KFP-GHPLILAGKSMGSRVSCMVAC 116 (154)
Q Consensus 93 ~~~-~~~i~l~G~S~Gg~~a~~~a~ 116 (154)
+.+ ..+-.++|||+|=+.|...+.
T Consensus 78 ~~g~i~p~~v~GhS~GE~aAa~~aG 102 (290)
T TIGR00128 78 EQGGLKPDFAAGHSLGEYSALVAAG 102 (290)
T ss_pred HcCCCCCCEEeecCHHHHHHHHHhC
Confidence 344 778899999999988876663
No 261
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=58.09 E-value=18 Score=24.19 Aligned_cols=34 Identities=18% Similarity=0.095 Sum_probs=24.0
Q ss_pred HHHHHHHHHhCCCCeEEEEEeCcchHHHHHHHhhc
Q 031716 84 TDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKE 118 (154)
Q Consensus 84 ~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 118 (154)
+.+++.+.++ +...=.+.|-|.||.++..++..+
T Consensus 15 ~Gvl~~L~e~-~~~~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 15 IGALKALEEA-GILKKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHHHHHHc-CCCcceEEEECHHHHHHHHHHcCC
Confidence 3445555443 444567899999999999988753
No 262
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=57.92 E-value=15 Score=27.19 Aligned_cols=30 Identities=20% Similarity=0.153 Sum_probs=22.1
Q ss_pred HHHHHHhC-CCCeEEEEEeCcchHHHHHHHh
Q 031716 87 VKGAVAKF-PGHPLILAGKSMGSRVSCMVAC 116 (154)
Q Consensus 87 i~~~~~~~-~~~~i~l~G~S~Gg~~a~~~a~ 116 (154)
.+.+.++. ..++.++.|||+|=+.|+..+.
T Consensus 74 ~~~l~~~~~~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 74 YRVLAEQGLGVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred HHHHHHhcCCCCCceeecccHhHHHHHHHcc
Confidence 44444444 5678899999999998887765
No 263
>PRK00103 rRNA large subunit methyltransferase; Provisional
Probab=56.51 E-value=55 Score=21.61 Aligned_cols=52 Identities=12% Similarity=0.040 Sum_probs=29.7
Q ss_pred HHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCcc
Q 031716 45 KDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMG 107 (154)
Q Consensus 45 ~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~G~S~G 107 (154)
..++..+.++-.+++.|-.|- .....++++.++........+-.+++|-+.|
T Consensus 58 ~~il~~l~~~~~~i~LDe~Gk-----------~~sS~~fA~~l~~~~~~g~~~i~F~IGGa~G 109 (157)
T PRK00103 58 ERILAALPKGARVIALDERGK-----------QLSSEEFAQELERWRDDGRSDVAFVIGGADG 109 (157)
T ss_pred HHHHhhCCCCCEEEEEcCCCC-----------cCCHHHHHHHHHHHHhcCCccEEEEEcCccc
Confidence 344555555556777777762 1123566666666654433345667777776
No 264
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=56.47 E-value=19 Score=26.49 Aligned_cols=32 Identities=19% Similarity=0.218 Sum_probs=23.4
Q ss_pred HHHHHHHHhCCCCeEEEEEeCcchHHHHHHHhh
Q 031716 85 DVVKGAVAKFPGHPLILAGKSMGSRVSCMVACK 117 (154)
Q Consensus 85 ~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 117 (154)
-+++.+.++ +...=.++|-|+|+.++..++..
T Consensus 32 GvL~aLee~-gi~~d~v~GtSaGAi~ga~ya~g 63 (306)
T cd07225 32 GVIKALEEA-GIPVDMVGGTSIGAFIGALYAEE 63 (306)
T ss_pred HHHHHHHHc-CCCCCEEEEECHHHHHHHHHHcC
Confidence 344444443 55556788999999999999875
No 265
>KOG1532 consensus GTPase XAB1, interacts with DNA repair protein XPA [Replication, recombination and repair]
Probab=56.46 E-value=80 Score=23.42 Aligned_cols=32 Identities=16% Similarity=0.373 Sum_probs=21.7
Q ss_pred CCCCCcEEEEecCCCCCCCchHHHHHHHHHHh
Q 031716 19 DTSSSPVVVFAHGAGAPSSSDWMIKWKDMLGK 50 (154)
Q Consensus 19 ~~~~~~~il~lHG~~~~~~~~~~~~~~~~~~~ 50 (154)
+...+|++|++-|..|+....|.+.+...+..
T Consensus 14 ~~~~~p~~ilVvGMAGSGKTTF~QrL~~hl~~ 45 (366)
T KOG1532|consen 14 GAIQRPVIILVVGMAGSGKTTFMQRLNSHLHA 45 (366)
T ss_pred ccccCCcEEEEEecCCCCchhHHHHHHHHHhh
Confidence 44567889999998887777665544444433
No 266
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=56.09 E-value=82 Score=25.20 Aligned_cols=88 Identities=11% Similarity=0.040 Sum_probs=53.7
Q ss_pred EEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCc
Q 031716 27 VFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSM 106 (154)
Q Consensus 27 l~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~G~S~ 106 (154)
+|=-|+|.+. ......-.+..++ ++|.|+.+|-.|.- . + -+.+...+..+++....+.|+.+|--.
T Consensus 442 lfekGYgkd~-a~vak~AI~~a~~--~gfDVvLiDTAGR~--~----~-----~~~lm~~l~k~~~~~~pd~i~~vgeal 507 (587)
T KOG0781|consen 442 LFEKGYGKDA-AGVAKEAIQEARN--QGFDVVLIDTAGRM--H----N-----NAPLMTSLAKLIKVNKPDLILFVGEAL 507 (587)
T ss_pred HHhhhcCCCh-HHHHHHHHHHHHh--cCCCEEEEeccccc--c----C-----ChhHHHHHHHHHhcCCCceEEEehhhh
Confidence 3445666654 2222223333333 89999999987731 1 1 123344556677777788999999877
Q ss_pred chHHHHHHHhh---------cCccccEEEEe
Q 031716 107 GSRVSCMVACK---------EDIAASAVLCL 128 (154)
Q Consensus 107 Gg~~a~~~a~~---------~~~~i~~~v~~ 128 (154)
=|.=++.-+.+ .|..|+++++.
T Consensus 508 vg~dsv~q~~~fn~al~~~~~~r~id~~~lt 538 (587)
T KOG0781|consen 508 VGNDSVDQLKKFNRALADHSTPRLIDGILLT 538 (587)
T ss_pred hCcHHHHHHHHHHHHHhcCCCccccceEEEE
Confidence 77666655543 25568888864
No 267
>PRK10279 hypothetical protein; Provisional
Probab=54.61 E-value=20 Score=26.40 Aligned_cols=34 Identities=29% Similarity=0.319 Sum_probs=25.0
Q ss_pred HHHHHHHHHhCCCCeEEEEEeCcchHHHHHHHhhc
Q 031716 84 TDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKE 118 (154)
Q Consensus 84 ~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 118 (154)
+-+++.+.+ .+...-.+.|-|+|+.++..++...
T Consensus 21 iGVL~aL~E-~gi~~d~i~GtS~GAlvga~yA~g~ 54 (300)
T PRK10279 21 IGVINALKK-VGIEIDIVAGCSIGSLVGAAYACDR 54 (300)
T ss_pred HHHHHHHHH-cCCCcCEEEEEcHHHHHHHHHHcCC
Confidence 345555555 3555678899999999999998754
No 268
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=54.60 E-value=62 Score=24.70 Aligned_cols=50 Identities=14% Similarity=0.088 Sum_probs=36.1
Q ss_pred HHHHHHHhC---CCCeEEEEEeCcchHHHHHHHhhcCccccEEEEeccCccccc
Q 031716 86 VVKGAVAKF---PGHPLILAGKSMGSRVSCMVACKEDIAASAVLCLGYPLKVCY 136 (154)
Q Consensus 86 ~i~~~~~~~---~~~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~~p~~~~~ 136 (154)
.++.+..+. +.+++++.|.|-=|..+...|.. ..+|++++-+..++....
T Consensus 158 ~vq~~~~~~~~~~i~~FvV~GaSKRGWTtWltaa~-D~RV~aivP~Vid~LN~~ 210 (367)
T PF10142_consen 158 AVQEFLKKKFGVNIEKFVVTGASKRGWTTWLTAAV-DPRVKAIVPIVIDVLNMK 210 (367)
T ss_pred HHHHHHHhhcCCCccEEEEeCCchHhHHHHHhhcc-CcceeEEeeEEEccCCcH
Confidence 344444433 67899999999999999998884 567888886655554443
No 269
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=54.31 E-value=20 Score=26.29 Aligned_cols=31 Identities=26% Similarity=0.217 Sum_probs=23.6
Q ss_pred HHHHHHHhCCCCeEEEEEeCcchHHHHHHHhh
Q 031716 86 VVKGAVAKFPGHPLILAGKSMGSRVSCMVACK 117 (154)
Q Consensus 86 ~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 117 (154)
+++.+.+ .+...-.|.|-|+|+.++..+|..
T Consensus 29 Vl~aL~e-~gi~~~~iaGtS~GAiva~l~A~g 59 (306)
T COG1752 29 VLKALEE-AGIPIDVIAGTSAGAIVAALYAAG 59 (306)
T ss_pred HHHHHHH-cCCCccEEEecCHHHHHHHHHHcC
Confidence 3444433 456778899999999999999975
No 270
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=54.16 E-value=26 Score=25.91 Aligned_cols=18 Identities=22% Similarity=0.283 Sum_probs=15.8
Q ss_pred EEEEeCcchHHHHHHHhh
Q 031716 100 ILAGKSMGSRVSCMVACK 117 (154)
Q Consensus 100 ~l~G~S~Gg~~a~~~a~~ 117 (154)
.+.|-|+||.+|..++..
T Consensus 35 ~i~GTStGgiIA~~la~g 52 (312)
T cd07212 35 WIAGTSTGGILALALLHG 52 (312)
T ss_pred EEEeeChHHHHHHHHHcC
Confidence 578999999999998864
No 271
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=54.03 E-value=80 Score=25.81 Aligned_cols=46 Identities=11% Similarity=0.155 Sum_probs=28.1
Q ss_pred CCCcEEEEecCCCCCCCchHHHHHHHHHHhhc-CCeEEEEEcCCCCCCC
Q 031716 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKAL-DAVEVVTFDYPYIAGG 68 (154)
Q Consensus 21 ~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~-~~~~v~~~d~~g~g~~ 68 (154)
+-+.+++++||..... .+ .++-.++...|. .|..+-..-+|+-+++
T Consensus 549 ~i~~P~LliHG~~D~~-v~-~~q~~~~~~aL~~~g~~~~~~~~p~e~H~ 595 (620)
T COG1506 549 NIKTPLLLIHGEEDDR-VP-IEQAEQLVDALKRKGKPVELVVFPDEGHG 595 (620)
T ss_pred ccCCCEEEEeecCCcc-CC-hHHHHHHHHHHHHcCceEEEEEeCCCCcC
Confidence 4456799999977654 22 223444444444 6777777777764333
No 272
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=53.83 E-value=27 Score=24.36 Aligned_cols=32 Identities=19% Similarity=0.224 Sum_probs=22.8
Q ss_pred HHHHHHHhCCCCeEEEEEeCcchHHHHHHHhhc
Q 031716 86 VVKGAVAKFPGHPLILAGKSMGSRVSCMVACKE 118 (154)
Q Consensus 86 ~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 118 (154)
+++.+.++ +.+.-.+.|-|+|+.++..++..+
T Consensus 18 vL~aL~e~-gi~~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 18 FLAALLEM-GLEPSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred HHHHHHHc-CCCceEEEEeCHHHHHHHHHHcCC
Confidence 44444443 444557899999999999998753
No 273
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=51.59 E-value=25 Score=25.45 Aligned_cols=33 Identities=18% Similarity=0.119 Sum_probs=23.7
Q ss_pred HHHHHHHHHhCCCCeEEEEEeCcchHHHHHHHhh
Q 031716 84 TDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACK 117 (154)
Q Consensus 84 ~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 117 (154)
+-+++.+.+ .+...=.+.|-|+|+.++..++..
T Consensus 26 iGVL~aLeE-~gi~~d~v~GtSaGAiiga~ya~g 58 (269)
T cd07227 26 IGILQALEE-AGIPIDAIGGTSIGSFVGGLYARE 58 (269)
T ss_pred HHHHHHHHH-cCCCccEEEEECHHHHHHHHHHcC
Confidence 334555544 355555788999999999999875
No 274
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=50.89 E-value=32 Score=24.14 Aligned_cols=34 Identities=24% Similarity=0.094 Sum_probs=24.1
Q ss_pred HHHHHHHHHhCCCC--eEEEEEeCcchHHHHHHHhhc
Q 031716 84 TDVVKGAVAKFPGH--PLILAGKSMGSRVSCMVACKE 118 (154)
Q Consensus 84 ~~~i~~~~~~~~~~--~i~l~G~S~Gg~~a~~~a~~~ 118 (154)
+-+++.+.++ +.. .-.+.|-|+|+.++..++...
T Consensus 15 ~GVl~~L~e~-gi~~~~~~i~G~SAGAl~aa~~asg~ 50 (233)
T cd07224 15 LGVLSLLIEA-GVINETTPLAGASAGSLAAACSASGL 50 (233)
T ss_pred HHHHHHHHHc-CCCCCCCEEEEEcHHHHHHHHHHcCC
Confidence 3455666654 232 347899999999999998764
No 275
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=49.86 E-value=67 Score=22.58 Aligned_cols=38 Identities=21% Similarity=0.257 Sum_probs=26.6
Q ss_pred CcEEEEecCCCCCCCc-hHHHHHHHHHHhhcCCeEEEEEcC
Q 031716 23 SPVVVFAHGAGAPSSS-DWMIKWKDMLGKALDAVEVVTFDY 62 (154)
Q Consensus 23 ~~~il~lHG~~~~~~~-~~~~~~~~~~~~l~~~~~v~~~d~ 62 (154)
++.|.|++-.+.+... .+.+..+..++. .|+.+...+.
T Consensus 32 ~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~--lg~~v~~L~l 70 (224)
T COG3340 32 RKTIAFIPTASVDSEDDFYVEKVRNALAK--LGLEVSELHL 70 (224)
T ss_pred CceEEEEecCccccchHHHHHHHHHHHHH--cCCeeeeeec
Confidence 6679999988877642 245566777776 6888777764
No 276
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=49.83 E-value=91 Score=22.10 Aligned_cols=40 Identities=25% Similarity=0.261 Sum_probs=25.5
Q ss_pred CCcEEEEecCCCCCCC-chHHHHHHHHHHhhcCCeEEEEEcCC
Q 031716 22 SSPVVVFAHGAGAPSS-SDWMIKWKDMLGKALDAVEVVTFDYP 63 (154)
Q Consensus 22 ~~~~il~lHG~~~~~~-~~~~~~~~~~~~~l~~~~~v~~~d~~ 63 (154)
..+.|+|++-...... ..+...+.+.++. .|+.+..++..
T Consensus 30 ~~~~v~fIPtAs~~~~~~~y~~~~~~af~~--lG~~v~~l~~~ 70 (233)
T PRK05282 30 GRRKAVFIPYAGVTQSWDDYTAKVAEALAP--LGIEVTGIHRV 70 (233)
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHHHHHH--CCCEEEEeccc
Confidence 4567899988664322 3444556666666 57877777654
No 277
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=47.52 E-value=43 Score=22.18 Aligned_cols=34 Identities=24% Similarity=0.276 Sum_probs=23.9
Q ss_pred HHHHHHHHHhCCCCeEEEEEeCcchHHHHHHHhhc
Q 031716 84 TDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKE 118 (154)
Q Consensus 84 ~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 118 (154)
+..++.+.++ ....=.+.|-|.|+.++..++..+
T Consensus 16 ~Gvl~~L~e~-g~~~d~i~GtSaGAi~aa~~a~g~ 49 (175)
T cd07228 16 IGVLRALEEE-GIEIDIIAGSSIGALVGALYAAGH 49 (175)
T ss_pred HHHHHHHHHC-CCCeeEEEEeCHHHHHHHHHHcCC
Confidence 3445555444 344567889999999999988764
No 278
>PRK04148 hypothetical protein; Provisional
Probab=47.49 E-value=53 Score=21.12 Aligned_cols=36 Identities=8% Similarity=0.006 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHhCCCCeEEEEEeCcchHHHHHHHhh
Q 031716 82 FHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACK 117 (154)
Q Consensus 82 ~~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 117 (154)
++++.+.......+..++..+|-..|..+|..++..
T Consensus 3 ~i~~~l~~~~~~~~~~kileIG~GfG~~vA~~L~~~ 38 (134)
T PRK04148 3 TIAEFIAENYEKGKNKKIVELGIGFYFKVAKKLKES 38 (134)
T ss_pred HHHHHHHHhcccccCCEEEEEEecCCHHHHHHHHHC
Confidence 444445444433344679999999888788877754
No 279
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=46.45 E-value=45 Score=23.72 Aligned_cols=35 Identities=20% Similarity=0.238 Sum_probs=23.2
Q ss_pred HHHHHHHHHhCC-CCeEEEEEeCcchHHHHHHHhhc
Q 031716 84 TDVVKGAVAKFP-GHPLILAGKSMGSRVSCMVACKE 118 (154)
Q Consensus 84 ~~~i~~~~~~~~-~~~i~l~G~S~Gg~~a~~~a~~~ 118 (154)
+-+++.+.++.. ...-.+.|-|+|+.+|..++...
T Consensus 16 ~GVl~aL~e~g~~~~~d~i~GtSAGAl~aa~~a~g~ 51 (245)
T cd07218 16 VGVAVCLKKYAPHLLLNKISGASAGALAACCLLCDL 51 (245)
T ss_pred HHHHHHHHHhCcccCCCeEEEEcHHHHHHHHHHhCC
Confidence 345555665531 11223899999999999988763
No 280
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=46.28 E-value=14 Score=26.20 Aligned_cols=15 Identities=27% Similarity=0.426 Sum_probs=12.3
Q ss_pred CCCeEEEEEeCcchH
Q 031716 95 PGHPLILAGKSMGSR 109 (154)
Q Consensus 95 ~~~~i~l~G~S~Gg~ 109 (154)
..+.|+++|||+|..
T Consensus 233 ~i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEV 247 (270)
T ss_pred CCCEEEEEeCCCchh
Confidence 457899999999863
No 281
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=45.82 E-value=43 Score=23.87 Aligned_cols=33 Identities=12% Similarity=0.045 Sum_probs=22.8
Q ss_pred HHHHHHHHhCCCC-eEEEEEeCcchHHHHHHHhhc
Q 031716 85 DVVKGAVAKFPGH-PLILAGKSMGSRVSCMVACKE 118 (154)
Q Consensus 85 ~~i~~~~~~~~~~-~i~l~G~S~Gg~~a~~~a~~~ 118 (154)
.+++.+.++ ... .=.+.|-|.|+.++..++...
T Consensus 15 Gvl~al~e~-~~~~fd~i~GtSaGAi~a~~~~~g~ 48 (266)
T cd07208 15 GVLDAFLEA-GIRPFDLVIGVSAGALNAASYLSGQ 48 (266)
T ss_pred HHHHHHHHc-CCCCCCEEEEECHHHHhHHHHHhCC
Confidence 345555554 222 337889999999999988764
No 282
>COG5023 Tubulin [Cytoskeleton]
Probab=45.17 E-value=53 Score=25.19 Aligned_cols=52 Identities=10% Similarity=0.115 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHHHhCCCCeEEEEEeCcchHHHH--------HHHhhcCccccEEEEe
Q 031716 77 EKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSC--------MVACKEDIAASAVLCL 128 (154)
Q Consensus 77 ~~~~~~~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~--------~~a~~~~~~i~~~v~~ 128 (154)
....+++.+.|+...+..+.-.=+++=||.||..+. .+..++|+++..-..+
T Consensus 110 ~e~~ddvmd~IrreAd~cD~LqGF~l~HS~gGGTGSG~GslLLerl~~eypkK~~~tfSV 169 (443)
T COG5023 110 KEIIDDVMDMIRREADGCDGLQGFLLLHSLGGGTGSGLGSLLLERLREEYPKKIKLTFSV 169 (443)
T ss_pred HHHHHHHHHHHHHHhhcCccccceeeeeeccCcCcccHHHHHHHHHHHhcchhheeEEEe
Confidence 445677777777777766666778888888876533 2233477776544433
No 283
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=44.97 E-value=49 Score=21.79 Aligned_cols=33 Identities=24% Similarity=0.197 Sum_probs=23.0
Q ss_pred HHHHHHHHHhCCCCeEEEEEeCcchHHHHHHHhh
Q 031716 84 TDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACK 117 (154)
Q Consensus 84 ~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 117 (154)
+..++.+.++ +...=.+.|-|.|+.++..++..
T Consensus 16 ~Gvl~~L~~~-~~~~d~i~GtSaGal~a~~~a~g 48 (175)
T cd07205 16 IGVLKALEEA-GIPIDIVSGTSAGAIVGALYAAG 48 (175)
T ss_pred HHHHHHHHHc-CCCeeEEEEECHHHHHHHHHHcC
Confidence 3344445443 33455789999999999999865
No 284
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=44.92 E-value=71 Score=21.42 Aligned_cols=51 Identities=12% Similarity=0.198 Sum_probs=34.1
Q ss_pred CCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCcch
Q 031716 53 DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGS 108 (154)
Q Consensus 53 ~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~G~S~Gg 108 (154)
.|++.+.+|.-..- ..+.. .....++.++++.+.+....+++.|+.-|.|.
T Consensus 39 ~Gik~li~DkDNTL--~~~~~---~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs 89 (168)
T PF09419_consen 39 KGIKALIFDKDNTL--TPPYE---DEIPPEYAEWLNELKKQFGKDRVLIVSNSAGS 89 (168)
T ss_pred cCceEEEEcCCCCC--CCCCc---CcCCHHHHHHHHHHHHHCCCCeEEEEECCCCc
Confidence 79999999976531 11111 22235666667777777777789999999863
No 285
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=44.63 E-value=47 Score=23.49 Aligned_cols=40 Identities=20% Similarity=0.276 Sum_probs=28.3
Q ss_pred CCCcEEEEecCCCCCCCchHHHHHHHHHHhhc-CCeEEEEEcCC
Q 031716 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKAL-DAVEVVTFDYP 63 (154)
Q Consensus 21 ~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~-~~~~v~~~d~~ 63 (154)
.+.|+||++.|+-++.... ....+...+. .++.|.++.-|
T Consensus 28 ~~~~vlIv~eG~DaAGKg~---~I~~l~~~lDPRg~~v~~~~~p 68 (230)
T TIGR03707 28 TGARVVIVFEGRDAAGKGG---TIKRITEHLNPRGARVVALPKP 68 (230)
T ss_pred cCCCEEEEEeCCCCCCchH---HHHHHHHhcCCCeeEEEeCCCC
Confidence 3469999999987765432 3566666665 68899988654
No 286
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=44.50 E-value=38 Score=23.37 Aligned_cols=34 Identities=24% Similarity=0.353 Sum_probs=24.3
Q ss_pred HHHHHHHHhCCCCeEEEEEeCcchHHHHHHHhhcC
Q 031716 85 DVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKED 119 (154)
Q Consensus 85 ~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~ 119 (154)
-+++.+.+. +...-.+.|-|.|+..+..++...+
T Consensus 15 Gvl~aL~e~-g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 15 GVLKALAEA-GIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCCc
Confidence 345555554 3445578899999999999998653
No 287
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=44.40 E-value=49 Score=23.97 Aligned_cols=40 Identities=10% Similarity=0.274 Sum_probs=27.9
Q ss_pred CCCcEEEEecCCCCCCCchHHHHHHHHHHhhc-CCeEEEEEcCC
Q 031716 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKAL-DAVEVVTFDYP 63 (154)
Q Consensus 21 ~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~-~~~~v~~~d~~ 63 (154)
+..|+||++.|+-++.... ....+...+. .+++|.++.-|
T Consensus 53 ~~~~vlIv~eG~DaAGKG~---~I~~l~~~lDPRg~~V~s~~~P 93 (264)
T TIGR03709 53 GRRSLLLVLQAMDAAGKDG---TIRHVMSGVNPQGCQVTSFKAP 93 (264)
T ss_pred CCCcEEEEEECCCCCCchH---HHHHHHHhcCCCeeEEEeCCCC
Confidence 4569999999987765432 3566666665 68888888643
No 288
>PRK10468 hydrogenase 2 small subunit; Provisional
Probab=44.19 E-value=1.4e+02 Score=22.86 Aligned_cols=17 Identities=12% Similarity=0.290 Sum_probs=13.3
Q ss_pred CCCcEEEEecCCCCCCC
Q 031716 21 SSSPVVVFAHGAGAPSS 37 (154)
Q Consensus 21 ~~~~~il~lHG~~~~~~ 37 (154)
.+++.||++|+.+.+..
T Consensus 46 ~~r~~viWLq~~~CtGc 62 (371)
T PRK10468 46 PQRPPVIWIGAQECTGC 62 (371)
T ss_pred CCCCcEEEEeCCCCCCc
Confidence 46788999999877654
No 289
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=44.00 E-value=52 Score=22.59 Aligned_cols=38 Identities=24% Similarity=0.217 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEEEeCc----chHHHHHHHhhc
Q 031716 80 VEFHTDVVKGAVAKFPGHPLILAGKSM----GSRVSCMVACKE 118 (154)
Q Consensus 80 ~~~~~~~i~~~~~~~~~~~i~l~G~S~----Gg~~a~~~a~~~ 118 (154)
.+.+++.+..++++.+ ..++|+|+|. |..++..+|.+.
T Consensus 93 ~e~~a~al~~~i~~~~-p~lVL~~~t~~~~~grdlaprlAarL 134 (202)
T cd01714 93 TLATAKALAAAIKKIG-VDLILTGKQSIDGDTGQVGPLLAELL 134 (202)
T ss_pred hHHHHHHHHHHHHHhC-CCEEEEcCCcccCCcCcHHHHHHHHh
Confidence 4667777777776655 4689999998 888888888773
No 290
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=42.45 E-value=26 Score=27.19 Aligned_cols=36 Identities=28% Similarity=0.366 Sum_probs=25.5
Q ss_pred HHHHHHHHHhCCCCeEEEEEeCcchHHHHHHHhhcCc
Q 031716 84 TDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDI 120 (154)
Q Consensus 84 ~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~ 120 (154)
.-+++.+.++ +..+=++.|-|+|+.+|..++...++
T Consensus 89 iGVLkaL~E~-gl~p~vIsGTSaGAivAal~as~~~e 124 (421)
T cd07230 89 IGVLKALFEA-NLLPRIISGSSAGSIVAAILCTHTDE 124 (421)
T ss_pred HHHHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCCHH
Confidence 3455556554 34445789999999999998876443
No 291
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=41.73 E-value=1.1e+02 Score=20.95 Aligned_cols=40 Identities=15% Similarity=0.124 Sum_probs=28.5
Q ss_pred CCCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcC
Q 031716 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDY 62 (154)
Q Consensus 21 ~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~ 62 (154)
..++.+|++-|..++..+-......+.+.. .|+.++..|-
T Consensus 20 ~~~~~viW~TGLSGsGKSTiA~ale~~L~~--~G~~~y~LDG 59 (197)
T COG0529 20 GQKGAVIWFTGLSGSGKSTIANALEEKLFA--KGYHVYLLDG 59 (197)
T ss_pred CCCCeEEEeecCCCCCHHHHHHHHHHHHHH--cCCeEEEecC
Confidence 456789999998887655444444444544 7999999983
No 292
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=40.52 E-value=59 Score=20.23 Aligned_cols=30 Identities=17% Similarity=0.077 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHhCCCCeEEEEEeCcchHHH
Q 031716 82 FHTDVVKGAVAKFPGHPLILAGKSMGSRVS 111 (154)
Q Consensus 82 ~~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a 111 (154)
+....+++.+..++.+.++++||+--|.+.
T Consensus 44 ~~~~sl~~av~~l~v~~ivV~gHt~CG~v~ 73 (119)
T cd00382 44 DVLASLEYAVEVLGVKHIIVCGHTDCGAVK 73 (119)
T ss_pred cHHHHHHHHHHhhCCCEEEEEccCCCcHHH
Confidence 345567777787888999999998777665
No 293
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=40.46 E-value=14 Score=24.40 Aligned_cols=31 Identities=13% Similarity=0.190 Sum_probs=19.4
Q ss_pred HHHHHHHHH----HHHHHhC----CCCeEEEEEeCcchH
Q 031716 79 LVEFHTDVV----KGAVAKF----PGHPLILAGKSMGSR 109 (154)
Q Consensus 79 ~~~~~~~~i----~~~~~~~----~~~~i~l~G~S~Gg~ 109 (154)
..+++++.+ +.+.++. ..++|.|+|-|++..
T Consensus 78 ~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 78 SADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred CHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 455666666 5555443 456999999999987
No 294
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=40.04 E-value=44 Score=26.88 Aligned_cols=26 Identities=19% Similarity=0.105 Sum_probs=21.4
Q ss_pred HhCCCCeEEEEEeCcchHHHHHHHhh
Q 031716 92 AKFPGHPLILAGKSMGSRVSCMVACK 117 (154)
Q Consensus 92 ~~~~~~~i~l~G~S~Gg~~a~~~a~~ 117 (154)
+..+..+-.++|||+|=+.|+..+.-
T Consensus 260 ~~~GI~Pdav~GHSlGE~aAa~aAGv 285 (538)
T TIGR02816 260 DEFAIKPDFALGYSKGEASMWASLGV 285 (538)
T ss_pred HhcCCCCCEEeecCHHHHHHHHHhCC
Confidence 45677888999999999888877764
No 295
>COG0218 Predicted GTPase [General function prediction only]
Probab=38.89 E-value=1.1e+02 Score=21.20 Aligned_cols=41 Identities=17% Similarity=0.179 Sum_probs=21.6
Q ss_pred EEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHh-CCCCeEEEE
Q 031716 57 VVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAK-FPGHPLILA 102 (154)
Q Consensus 57 v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~i~l~ 102 (154)
...+|+||+|.-.- + ....+.|.+.+.+.++. .+...++++
T Consensus 72 ~~lVDlPGYGyAkv--~---k~~~e~w~~~i~~YL~~R~~L~~vvll 113 (200)
T COG0218 72 LRLVDLPGYGYAKV--P---KEVKEKWKKLIEEYLEKRANLKGVVLL 113 (200)
T ss_pred EEEEeCCCcccccC--C---HHHHHHHHHHHHHHHhhchhheEEEEE
Confidence 56689999863222 2 23345666665555543 234444444
No 296
>cd00286 Tubulin_FtsZ Tubulin/FtsZ: Family includes tubulin alpha-, beta-, gamma-, delta-, and epsilon-tubulins as well as FtsZ, all of which are involved in polymer formation. Tubulin is the major component of microtubules, but also exists as a heterodimer and as a curved oligomer. Microtubules exist in all eukaryotic cells and are responsible for many functions, including cellular transport, cell motility, and mitosis. FtsZ forms a ring-shaped septum at the site of bacterial cell division, which is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ can polymerize into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria, archaea, and chloroplasts.
Probab=38.66 E-value=1.6e+02 Score=21.77 Aligned_cols=30 Identities=13% Similarity=0.164 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHHHhCCCCeEEEEEeCcch
Q 031716 79 LVEFHTDVVKGAVAKFPGHPLILAGKSMGS 108 (154)
Q Consensus 79 ~~~~~~~~i~~~~~~~~~~~i~l~G~S~Gg 108 (154)
..+++.+.++...+..+.-..+++-||+||
T Consensus 71 ~~e~i~~~ir~~~E~cD~~~gf~i~~slgG 100 (328)
T cd00286 71 YQEEILDIIRKEAEECDSLQGFFITHSLGG 100 (328)
T ss_pred HHHHHHHHHHHHHHhCCCccceEEEeecCC
Confidence 456677777887777776677888888887
No 297
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=38.33 E-value=31 Score=26.61 Aligned_cols=36 Identities=28% Similarity=0.363 Sum_probs=26.1
Q ss_pred HHHHHHHHHhCCCCeEEEEEeCcchHHHHHHHhhcCc
Q 031716 84 TDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDI 120 (154)
Q Consensus 84 ~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~ 120 (154)
+.+++.+.++ +..+=++.|-|.|+.+|..++...++
T Consensus 83 ~GVlkaL~e~-gllp~iI~GtSAGAivaalla~~t~~ 118 (407)
T cd07232 83 FGVVKALLDA-DLLPNVISGTSGGSLVAALLCTRTDE 118 (407)
T ss_pred HHHHHHHHhC-CCCCCEEEEECHHHHHHHHHHcCCHH
Confidence 4456666665 34455789999999999999986443
No 298
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=38.26 E-value=2e+02 Score=22.71 Aligned_cols=106 Identities=18% Similarity=0.185 Sum_probs=63.5
Q ss_pred CCCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEE--c-CC-----------------CCCCCCCCCCch-----
Q 031716 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTF--D-YP-----------------YIAGGKRKAPPK----- 75 (154)
Q Consensus 21 ~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~--d-~~-----------------g~g~~~~~~~~~----- 75 (154)
...|.+|++-|..|+.-+-..-.++.++.. .++.+..+ | || -++.+....|..
T Consensus 97 ~~~P~vImmvGLQGsGKTTt~~KLA~~lkk--~~~kvllVaaD~~RpAA~eQL~~La~q~~v~~f~~~~~~~Pv~Iak~a 174 (451)
T COG0541 97 KKPPTVILMVGLQGSGKTTTAGKLAKYLKK--KGKKVLLVAADTYRPAAIEQLKQLAEQVGVPFFGSGTEKDPVEIAKAA 174 (451)
T ss_pred CCCCeEEEEEeccCCChHhHHHHHHHHHHH--cCCceEEEecccCChHHHHHHHHHHHHcCCceecCCCCCCHHHHHHHH
Confidence 456889999998877655444456666666 55555543 3 11 122211111111
Q ss_pred ------------------HHHHHHHHHHHHHHHHHhCCCCeEEEEEeCcchHHHHHHHhhcCc--cccEEEEe
Q 031716 76 ------------------AEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDI--AASAVLCL 128 (154)
Q Consensus 76 ------------------~~~~~~~~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~--~i~~~v~~ 128 (154)
....-+++.+.+..+.+..+.+.+.++-.++=|.-|...|..+.+ .+.++|+.
T Consensus 175 l~~ak~~~~DvvIvDTAGRl~ide~Lm~El~~Ik~~~~P~E~llVvDam~GQdA~~~A~aF~e~l~itGvIlT 247 (451)
T COG0541 175 LEKAKEEGYDVVIVDTAGRLHIDEELMDELKEIKEVINPDETLLVVDAMIGQDAVNTAKAFNEALGITGVILT 247 (451)
T ss_pred HHHHHHcCCCEEEEeCCCcccccHHHHHHHHHHHhhcCCCeEEEEEecccchHHHHHHHHHhhhcCCceEEEE
Confidence 011112344455555566677789999999999999999988644 46777764
No 299
>cd00883 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=36.61 E-value=68 Score=21.66 Aligned_cols=33 Identities=18% Similarity=0.164 Sum_probs=26.5
Q ss_pred HHHHHHHHHHhCCCCeEEEEEeCcchHHHHHHH
Q 031716 83 HTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVA 115 (154)
Q Consensus 83 ~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a 115 (154)
....+++.+..++.+.|+++|||-=|.+...+.
T Consensus 67 ~~asleyAv~~L~v~~IvV~GHs~CGav~a~~~ 99 (182)
T cd00883 67 CLSVLQYAVDVLKVKHIIVCGHYGCGGVKAALT 99 (182)
T ss_pred hhhhHHHHHHhcCCCEEEEecCCCchHHHHHHc
Confidence 556788888889999999999998777665543
No 300
>cd02188 gamma_tubulin Gamma-tubulin is a ubiquitous phylogenetically conserved member of tubulin superfamily. Gamma is a low abundance protein present within the cells in both various types of microtubule-organizing centers and cytoplasmic protein complexes. Gamma-tubulin recruits the alpha/beta-tubulin dimers that form the minus ends of microtubules and is thought to be involved in microtubule nucleation and capping.
Probab=35.72 E-value=2.1e+02 Score=22.34 Aligned_cols=33 Identities=9% Similarity=0.020 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHHHhCCCCeEEEEEeCcchHH
Q 031716 78 KLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRV 110 (154)
Q Consensus 78 ~~~~~~~~~i~~~~~~~~~~~i~l~G~S~Gg~~ 110 (154)
...+++.+.++..++..+.-.-+++=||+||..
T Consensus 111 ~~~d~i~d~ir~~~E~cd~l~gf~i~~SlgGGT 143 (431)
T cd02188 111 EVQEEILDIIDREADGSDSLEGFVLCHSIAGGT 143 (431)
T ss_pred HHHHHHHHHHHHHHhcCCCcceeEEEecCCCCc
Confidence 345566666666666666556677788888644
No 301
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=35.45 E-value=43 Score=25.75 Aligned_cols=35 Identities=26% Similarity=0.394 Sum_probs=24.9
Q ss_pred HHHHHHHHHhCCCCeEEEEEeCcchHHHHHHHhhcC
Q 031716 84 TDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKED 119 (154)
Q Consensus 84 ~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~ 119 (154)
.-+++.+.++ +..+=+|.|-|.|+.+|..++...+
T Consensus 99 ~Gv~kaL~e~-gl~p~~i~GtS~Gaivaa~~a~~~~ 133 (391)
T cd07229 99 LGVVKALWLR-GLLPRIITGTATGALIAALVGVHTD 133 (391)
T ss_pred HHHHHHHHHc-CCCCceEEEecHHHHHHHHHHcCCH
Confidence 3455555553 4445578999999999999998543
No 302
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=35.35 E-value=42 Score=18.86 Aligned_cols=11 Identities=36% Similarity=0.764 Sum_probs=8.3
Q ss_pred CcEEEEecCCC
Q 031716 23 SPVVVFAHGAG 33 (154)
Q Consensus 23 ~~~il~lHG~~ 33 (154)
.|.++++||..
T Consensus 31 ~~~~~lvhGga 41 (71)
T PF10686_consen 31 HPDMVLVHGGA 41 (71)
T ss_pred CCCEEEEECCC
Confidence 46688899866
No 303
>PF15566 Imm18: Immunity protein 18
Probab=34.84 E-value=75 Score=16.80 Aligned_cols=29 Identities=21% Similarity=0.141 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEEeCcchH
Q 031716 81 EFHTDVVKGAVAKFPGHPLILAGKSMGSR 109 (154)
Q Consensus 81 ~~~~~~i~~~~~~~~~~~i~l~G~S~Gg~ 109 (154)
..+++.+..+.+..+.+.+.++--||||.
T Consensus 5 ~~L~~~l~~L~~~~~~~H~Hlmtp~WgG~ 33 (52)
T PF15566_consen 5 ELLQDQLENLQEKEPFDHEHLMTPDWGGE 33 (52)
T ss_pred HHHHHHHHHHHhccCCCCceecccccccc
Confidence 44566677777766777899999999985
No 304
>COG4021 Uncharacterized conserved protein [Function unknown]
Probab=34.12 E-value=1.7e+02 Score=20.65 Aligned_cols=62 Identities=13% Similarity=-0.010 Sum_probs=36.6
Q ss_pred HHHHHHhhcCCeEEEEEcCCCCCCCCC---CCCchHHHHHHHHHHHHHHHHHhCCCCeEEEEEeC
Q 031716 44 WKDMLGKALDAVEVVTFDYPYIAGGKR---KAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKS 105 (154)
Q Consensus 44 ~~~~~~~l~~~~~v~~~d~~g~g~~~~---~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~G~S 105 (154)
+..-.+-+.+.|-|+.+|-+|+-.-.+ -..+......+.+++....++...+.+.+...|+|
T Consensus 11 vya~~R~~P~t~iVlRiDGr~Fhk~tk~l~FeKPyD~~f~~lM~~tA~~lv~~~~~~i~LaYtfS 75 (249)
T COG4021 11 VYAHDRILPQTYIVLRIDGRGFHKFTKFLDFEKPYDERFLKLMNATAKNLVLKYGLDIILAYTFS 75 (249)
T ss_pred hhhhhcCCCCceEEEEecChhhhHHHhhcCcCCcchHHHHHHHHHHHHHHHHHhCCCeEEEEecc
Confidence 333344445789999999888632111 11111233456667777777777776666666776
No 305
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=33.92 E-value=22 Score=23.89 Aligned_cols=77 Identities=17% Similarity=0.211 Sum_probs=46.1
Q ss_pred CCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCe-EEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeEE
Q 031716 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAV-EVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLI 100 (154)
Q Consensus 22 ~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~-~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~ 100 (154)
+...||++-|+|.... .+..+... +++ -++++||.... -+.+. . ....+.
T Consensus 10 gd~LIvyFaGwgtpps-----~v~HLilp--eN~dl~lcYDY~dl~-------ldfDf--s-------------Ay~hir 60 (214)
T COG2830 10 GDHLIVYFAGWGTPPS-----AVNHLILP--ENHDLLLCYDYQDLN-------LDFDF--S-------------AYRHIR 60 (214)
T ss_pred CCEEEEEEecCCCCHH-----HHhhccCC--CCCcEEEEeehhhcC-------cccch--h-------------hhhhhh
Confidence 3458999999998653 24444432 454 55677887531 00110 0 113678
Q ss_pred EEEeCcchHHHHHHHhhcCccccEEEEec
Q 031716 101 LAGKSMGSRVSCMVACKEDIAASAVLCLG 129 (154)
Q Consensus 101 l~G~S~Gg~~a~~~a~~~~~~i~~~v~~~ 129 (154)
++++|||-.+|-.+.+..+ .+..+.+.
T Consensus 61 lvAwSMGVwvAeR~lqg~~--lksatAiN 87 (214)
T COG2830 61 LVAWSMGVWVAERVLQGIR--LKSATAIN 87 (214)
T ss_pred hhhhhHHHHHHHHHHhhcc--ccceeeec
Confidence 8999999999888887643 44444443
No 306
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=33.63 E-value=2.3e+02 Score=21.97 Aligned_cols=88 Identities=16% Similarity=0.172 Sum_probs=48.9
Q ss_pred CCcEEEEecCCCCCCC--chHHHHHHHHHHhhcCCeEEEEEcCC--CCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCC
Q 031716 22 SSPVVVFAHGAGAPSS--SDWMIKWKDMLGKALDAVEVVTFDYP--YIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGH 97 (154)
Q Consensus 22 ~~~~il~lHG~~~~~~--~~~~~~~~~~~~~l~~~~~v~~~d~~--g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 97 (154)
+...||++||--.|.- +.-.+.|.+++.-+...--+-.+|.- |++.| .++-+..++.+......
T Consensus 170 ~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~G-----------leeDa~~lR~~a~~~~~- 237 (396)
T COG1448 170 PEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADG-----------LEEDAYALRLFAEVGPE- 237 (396)
T ss_pred CCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccc-----------hHHHHHHHHHHHHhCCc-
Confidence 3456999999554432 22244677777666544444455644 44322 24444556666654332
Q ss_pred eEEEEEeCcchHHHHHHHhhcCccccEEEEe
Q 031716 98 PLILAGKSMGSRVSCMVACKEDIAASAVLCL 128 (154)
Q Consensus 98 ~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v~~ 128 (154)
.++..|+.-.+++ |.+++.++..+
T Consensus 238 --~lva~S~SKnfgL-----YgERVGa~~vv 261 (396)
T COG1448 238 --LLVASSFSKNFGL-----YGERVGALSVV 261 (396)
T ss_pred --EEEEehhhhhhhh-----hhhccceeEEE
Confidence 6777777654433 45666666555
No 307
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=33.41 E-value=45 Score=21.63 Aligned_cols=21 Identities=19% Similarity=0.276 Sum_probs=16.6
Q ss_pred CeEEEEEeCcchHHHHHHHhh
Q 031716 97 HPLILAGKSMGSRVSCMVACK 117 (154)
Q Consensus 97 ~~i~l~G~S~Gg~~a~~~a~~ 117 (154)
..-.+.|-|.||.+|..++..
T Consensus 27 ~~d~i~GtS~Gal~a~~~~~~ 47 (204)
T PF01734_consen 27 RFDVISGTSAGALNAALLALG 47 (204)
T ss_dssp T-SEEEEECCHHHHHHHHHTC
T ss_pred CccEEEEcChhhhhHHHHHhC
Confidence 345678999999999888775
No 308
>PLN03006 carbonate dehydratase
Probab=33.23 E-value=76 Score=23.50 Aligned_cols=33 Identities=9% Similarity=0.189 Sum_probs=26.7
Q ss_pred HHHHHHHHHHhCCCCeEEEEEeCcchHHHHHHH
Q 031716 83 HTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVA 115 (154)
Q Consensus 83 ~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a 115 (154)
....+++.+..++.+.|+++|||-=|.+...+.
T Consensus 158 ~~aSLEYAV~~L~V~~IVV~GHs~CGaV~Aal~ 190 (301)
T PLN03006 158 TKAALEFSVNTLNVENILVIGHSRCGGIQALMK 190 (301)
T ss_pred hhhhHHHHHHHhCCCEEEEecCCCchHHHHHhh
Confidence 566888999999999999999998776665443
No 309
>smart00864 Tubulin Tubulin/FtsZ family, GTPase domain. This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.
Probab=33.07 E-value=1.2e+02 Score=20.53 Aligned_cols=32 Identities=13% Similarity=0.146 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCeEEEEEeCcchHH
Q 031716 76 AEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRV 110 (154)
Q Consensus 76 ~~~~~~~~~~~i~~~~~~~~~~~i~l~G~S~Gg~~ 110 (154)
.....++..+.++..++.. ..+++=||+||..
T Consensus 65 g~~~~~~~~~~ir~~le~~---d~~~i~~slgGGT 96 (192)
T smart00864 65 GREAAEESLDEIREELEGA---DGVFITAGMGGGT 96 (192)
T ss_pred HHHHHHHHHHHHHHHhcCC---CEEEEeccCCCCc
Confidence 3445556666666666543 6777788888743
No 310
>PF08433 KTI12: Chromatin associated protein KTI12 ; InterPro: IPR013641 This is a family of chromatin associated proteins which interact with the Elongator complex, a component of the elongating form of RNA polymerase II []. The Elongator complex has histone acetyltransferase activity. ; PDB: 3ADB_B 3ADC_B 3A4M_B 3A4N_B 3AM1_A 3A4L_B 3ADD_A.
Probab=32.85 E-value=1.6e+02 Score=21.35 Aligned_cols=36 Identities=17% Similarity=0.188 Sum_probs=22.2
Q ss_pred EEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcC
Q 031716 25 VVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDY 62 (154)
Q Consensus 25 ~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~ 62 (154)
++|++-|..++..+.....+.+.++. .++.|..++-
T Consensus 2 pLiil~G~P~SGKTt~a~~L~~~~~~--~~~~v~~i~~ 37 (270)
T PF08433_consen 2 PLIILCGLPCSGKTTRAKELKKYLEE--KGKEVVIISD 37 (270)
T ss_dssp -EEEEE--TTSSHHHHHHHHHHHHHH--TT--EEEE-T
T ss_pred EEEEEEcCCCCcHHHHHHHHHHHHHh--cCCEEEEEcc
Confidence 47888899888767666667777766 6788888773
No 311
>cd03379 beta_CA_cladeD Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=32.72 E-value=78 Score=20.35 Aligned_cols=29 Identities=7% Similarity=-0.075 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHhCCCCeEEEEEeCcchHH
Q 031716 82 FHTDVVKGAVAKFPGHPLILAGKSMGSRV 110 (154)
Q Consensus 82 ~~~~~i~~~~~~~~~~~i~l~G~S~Gg~~ 110 (154)
+....+.+.+..++.+.|+++||+-=|.+
T Consensus 41 ~~~~sl~~av~~l~~~~IiV~gHt~Cg~~ 69 (142)
T cd03379 41 DAIRSLVVSVYLLGTREIIVIHHTDCGML 69 (142)
T ss_pred hHHHHHHHHHHHhCCCEEEEEeecCCcce
Confidence 34556777778888899999999854443
No 312
>cd02202 FtsZ_type2 FtsZ is a GTPase that is similar to the eukaryotic tubulins and is essential for cell division in prokaryotes. FtsZ is capable of polymerizing in a GTP-driven process into structures similar to those formed by tubulin. FtsZ forms a ring-shaped septum at the site of bacterial cell division, which is required for constriction of cell membrane and cell envelope to yield two daughter cells.
Probab=32.46 E-value=1.3e+02 Score=22.71 Aligned_cols=37 Identities=16% Similarity=0.102 Sum_probs=24.3
Q ss_pred chHHHHHHHHHHHHHHHHHhCCC--CeEEEEEeCcchHH
Q 031716 74 PKAEKLVEFHTDVVKGAVAKFPG--HPLILAGKSMGSRV 110 (154)
Q Consensus 74 ~~~~~~~~~~~~~i~~~~~~~~~--~~i~l~G~S~Gg~~ 110 (154)
.......++..+.++..++.... ...+++-||+||..
T Consensus 73 ~~G~~~aee~~e~I~~~le~~~~~~~d~~~i~aglGGGT 111 (349)
T cd02202 73 ELGAEVAEEDLEEVMRAIDDRGTSDADAILVIAGLGGGT 111 (349)
T ss_pred HHHHHHHHHHHHHHHHHHhccccccccEEEEecccCCCc
Confidence 33444556666667777766442 46888889998765
No 313
>cd03028 GRX_PICOT_like Glutaredoxin (GRX) family, PKC-interacting cousin of TRX (PICOT)-like subfamily; composed of PICOT and GRX-PICOT-like proteins. The non-PICOT members of this family contain only the GRX-like domain, whereas PICOT contains an N-terminal TRX-like domain followed by one to three GRX-like domains. It is interesting to note that PICOT from plants contain three repeats of the GRX-like domain, metazoan proteins (except for insect) have two repeats, while fungal sequences contain only one copy of the domain. PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli. Both GRX and TRX domains of PICOT are required for its activity. Characterized non-PICOT members of this family include CXIP1, a CAX-interacting protein
Probab=32.28 E-value=1.1e+02 Score=17.77 Aligned_cols=80 Identities=16% Similarity=0.073 Sum_probs=46.9
Q ss_pred CCCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeEE
Q 031716 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLI 100 (154)
Q Consensus 21 ~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~ 100 (154)
++.+++||..|..+....++.....+++....-.|..+ |... + .+..+.+...........++
T Consensus 6 ~~~~vvvf~k~~~~~~~Cp~C~~ak~~L~~~~i~y~~i--dv~~---------~------~~~~~~l~~~~g~~tvP~vf 68 (90)
T cd03028 6 KENPVVLFMKGTPEEPRCGFSRKVVQILNQLGVDFGTF--DILE---------D------EEVRQGLKEYSNWPTFPQLY 68 (90)
T ss_pred ccCCEEEEEcCCCCCCCCcHHHHHHHHHHHcCCCeEEE--EcCC---------C------HHHHHHHHHHhCCCCCCEEE
Confidence 35789999998777666777667777887744334444 3221 0 12233333333333334566
Q ss_pred EEEeCcchHHHHHHHhh
Q 031716 101 LAGKSMGSRVSCMVACK 117 (154)
Q Consensus 101 l~G~S~Gg~~a~~~a~~ 117 (154)
+-|.-.||.--+..+.+
T Consensus 69 i~g~~iGG~~~l~~l~~ 85 (90)
T cd03028 69 VNGELVGGCDIVKEMHE 85 (90)
T ss_pred ECCEEEeCHHHHHHHHH
Confidence 77888888776665544
No 314
>COG4667 Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=32.14 E-value=49 Score=24.14 Aligned_cols=38 Identities=13% Similarity=-0.018 Sum_probs=24.9
Q ss_pred HHHHHHHHHhCCCCeEEEEEeCcchHHHHHHHhhcCcc
Q 031716 84 TDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIA 121 (154)
Q Consensus 84 ~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~ 121 (154)
+.+++.+++.....==.++|.|+|+.-+..+..+++.+
T Consensus 27 AGVLD~fl~a~~~~f~~~~GvSAGA~n~~aYls~Q~gr 64 (292)
T COG4667 27 AGVLDEFLRANFNPFDLVVGVSAGALNLVAYLSKQRGR 64 (292)
T ss_pred HHHHHHHHHhccCCcCeeeeecHhHHhHHHHhhcCCch
Confidence 34566666433222224679999999999888776554
No 315
>cd02189 delta_tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa. The alpha- and beta-tubulins are the major components of microtubules, while gamma-tubulin plays a major role in the nucleation of microtubule assembly. The delta- and epsilon-tubulins are widespread but unlike the alpha, beta, and gamma-tubulins they are not ubiquitous among eukaryotes. Delta-tubulin plays an essential role in forming the triplet microtubules of centrioles and basal bodies.
Probab=31.90 E-value=1.8e+02 Score=22.82 Aligned_cols=34 Identities=18% Similarity=0.155 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHHHHhCCCCeEEEEEeCcchHH
Q 031716 77 EKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRV 110 (154)
Q Consensus 77 ~~~~~~~~~~i~~~~~~~~~~~i~l~G~S~Gg~~ 110 (154)
....++..+.++..+++.+.-.-+++=||+||..
T Consensus 106 ~~~~~~~~d~ir~~~E~cd~~~gf~~~~sl~GGt 139 (446)
T cd02189 106 PQIKEDILDLIRKEVEKCDSFEGFLVLHSLAGGT 139 (446)
T ss_pred hhhHHHHHHHHHHHHHhCCCccceEEEecCCCCc
Confidence 4456888888888888887667788888888754
No 316
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=31.79 E-value=98 Score=22.14 Aligned_cols=35 Identities=14% Similarity=0.146 Sum_probs=23.2
Q ss_pred HHHHHHHHHhCCC---CeEEEEEeCcchHHHHHHHhhc
Q 031716 84 TDVVKGAVAKFPG---HPLILAGKSMGSRVSCMVACKE 118 (154)
Q Consensus 84 ~~~i~~~~~~~~~---~~i~l~G~S~Gg~~a~~~a~~~ 118 (154)
+-+++.+.++... ..-.+.|-|.|+..+..++...
T Consensus 16 ~GVl~aL~e~~~~l~~~~~~i~GtSAGAl~aa~~asg~ 53 (252)
T cd07221 16 VGVTRCLSERAPHLLRDARMFFGASAGALHCVTFLSGL 53 (252)
T ss_pred HHHHHHHHHhCcchhccCCEEEEEcHHHHHHHHHHhCC
Confidence 3445555554211 1346899999999999998754
No 317
>KOG1752 consensus Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=31.73 E-value=1.3e+02 Score=18.44 Aligned_cols=81 Identities=20% Similarity=0.217 Sum_probs=50.4
Q ss_pred CCCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeEE
Q 031716 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLI 100 (154)
Q Consensus 21 ~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~ 100 (154)
...|+|+|.--+ .++....+.++..+...+.|+-.|-..++ .++.+.+..+..+.....++
T Consensus 12 ~~~~VVifSKs~-----C~~c~~~k~ll~~~~v~~~vvELD~~~~g--------------~eiq~~l~~~tg~~tvP~vF 72 (104)
T KOG1752|consen 12 SENPVVIFSKSS-----CPYCHRAKELLSDLGVNPKVVELDEDEDG--------------SEIQKALKKLTGQRTVPNVF 72 (104)
T ss_pred hcCCEEEEECCc-----CchHHHHHHHHHhCCCCCEEEEccCCCCc--------------HHHHHHHHHhcCCCCCCEEE
Confidence 356777777621 33344577777776566777777765321 13334444444333555899
Q ss_pred EEEeCcchHHHHHHHhhcCc
Q 031716 101 LAGKSMGSRVSCMVACKEDI 120 (154)
Q Consensus 101 l~G~S~Gg~~a~~~a~~~~~ 120 (154)
|-|...||.--+.......+
T Consensus 73 I~Gk~iGG~~dl~~lh~~G~ 92 (104)
T KOG1752|consen 73 IGGKFIGGASDLMALHKSGE 92 (104)
T ss_pred ECCEEEcCHHHHHHHHHcCC
Confidence 99999999887777765443
No 318
>PRK13938 phosphoheptose isomerase; Provisional
Probab=31.44 E-value=1.7e+02 Score=20.05 Aligned_cols=24 Identities=13% Similarity=0.174 Sum_probs=21.1
Q ss_pred CCCeEEEEEeCcchHHHHHHHhhc
Q 031716 95 PGHPLILAGKSMGSRVSCMVACKE 118 (154)
Q Consensus 95 ~~~~i~l~G~S~Gg~~a~~~a~~~ 118 (154)
..++|+++|.+-.+.+|..++.+.
T Consensus 44 ~g~rI~i~G~G~S~~~A~~fa~~L 67 (196)
T PRK13938 44 AGARVFMCGNGGSAADAQHFAAEL 67 (196)
T ss_pred CCCEEEEEeCcHHHHHHHHHHHHc
Confidence 457999999999999999999874
No 319
>cd00884 beta_CA_cladeB Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=31.41 E-value=93 Score=21.24 Aligned_cols=33 Identities=15% Similarity=0.267 Sum_probs=26.2
Q ss_pred HHHHHHHHHHhCCCCeEEEEEeCcchHHHHHHH
Q 031716 83 HTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVA 115 (154)
Q Consensus 83 ~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a 115 (154)
....+++.+..++.+.|+++|||-=|.+...+.
T Consensus 73 ~~asleyav~~l~v~~ivV~GH~~Cgav~Aa~~ 105 (190)
T cd00884 73 TSAAIEYAVAVLKVEHIVVCGHSDCGGIRALLS 105 (190)
T ss_pred hhhhHHHHHHHhCCCEEEEeCCCcchHHHHHhc
Confidence 556788888888999999999998776655544
No 320
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=31.39 E-value=62 Score=23.90 Aligned_cols=33 Identities=24% Similarity=0.366 Sum_probs=22.8
Q ss_pred HHHHHHHHHhCCCCeEEEEEeCcchHHHHHHHhh
Q 031716 84 TDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACK 117 (154)
Q Consensus 84 ~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 117 (154)
+.+++.+.++ +..+-.+.|-|.|+.+|..++..
T Consensus 85 ~Gvl~aL~e~-~l~~~~i~GtSaGAi~aa~~~~~ 117 (298)
T cd07206 85 LGVVKALWEQ-DLLPRVISGSSAGAIVAALLGTH 117 (298)
T ss_pred HHHHHHHHHc-CCCCCEEEEEcHHHHHHHHHHcC
Confidence 3445555544 33445789999999999988854
No 321
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=31.36 E-value=1.6e+02 Score=21.54 Aligned_cols=57 Identities=18% Similarity=0.137 Sum_probs=29.4
Q ss_pred EEEEEcCCCCCCCCCCCCchHHHHHHHHHH--------HHHHHHHhCCCCeEEEEEeC-cchHHHHHHHhh
Q 031716 56 EVVTFDYPYIAGGKRKAPPKAEKLVEFHTD--------VVKGAVAKFPGHPLILAGKS-MGSRVSCMVACK 117 (154)
Q Consensus 56 ~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~--------~i~~~~~~~~~~~i~l~G~S-~Gg~~a~~~a~~ 117 (154)
+++.+|..|.-.......+.. ...++. .+.+.++.. ++-+|+|-| .||.+.-.+.+.
T Consensus 61 ~i~~vD~~Gll~~~r~~l~~~---~~~~a~~~~~~~~~~L~e~i~~v--~ptvlIG~S~~~g~ft~evv~~ 126 (279)
T cd05312 61 KIWLVDSKGLLTKDRKDLTPF---KKPFARKDEEKEGKSLLEVVKAV--KPTVLIGLSGVGGAFTEEVVRA 126 (279)
T ss_pred eEEEEcCCCeEeCCCCcchHH---HHHHHhhcCcccCCCHHHHHHhc--CCCEEEEeCCCCCCCCHHHHHH
Confidence 889999988432221111111 112221 233333322 467889999 477776655543
No 322
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=30.60 E-value=91 Score=22.11 Aligned_cols=33 Identities=21% Similarity=0.140 Sum_probs=21.9
Q ss_pred HHHHHHHHHhCC--CCe-EEEEEeCcchHHHHHHHh
Q 031716 84 TDVVKGAVAKFP--GHP-LILAGKSMGSRVSCMVAC 116 (154)
Q Consensus 84 ~~~i~~~~~~~~--~~~-i~l~G~S~Gg~~a~~~a~ 116 (154)
+-+++.+.++.. .++ -.+.|-|+|+.++..++.
T Consensus 15 iGVl~~L~e~g~~l~~~~~~i~GtSaGAl~aa~~a~ 50 (246)
T cd07222 15 LGAAKALLRHGKKLLKRVKRFAGASAGSLVAAVLLT 50 (246)
T ss_pred HHHHHHHHHcCchhhccCCEEEEECHHHHHHHHHhc
Confidence 345555555421 112 368999999999999984
No 323
>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]
Probab=30.43 E-value=2.3e+02 Score=21.27 Aligned_cols=40 Identities=10% Similarity=0.013 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHHhC----CCCeEEEEEeCcchHHHHHHHhhcC
Q 031716 80 VEFHTDVVKGAVAKF----PGHPLILAGKSMGSRVSCMVACKED 119 (154)
Q Consensus 80 ~~~~~~~i~~~~~~~----~~~~i~l~G~S~Gg~~a~~~a~~~~ 119 (154)
-..+.+.|++...+. +.+++.++|.|-|=.+|...+..+.
T Consensus 21 e~nV~~QI~y~k~~gp~~ngPKkVLviGaSsGyGLa~RIsaaFG 64 (398)
T COG3007 21 EANVLQQIDYVKAAGPIKNGPKKVLVIGASSGYGLAARISAAFG 64 (398)
T ss_pred HHHHHHHHHHHHhcCCccCCCceEEEEecCCcccHHHHHHHHhC
Confidence 355666666666553 4568999999999888888887754
No 324
>KOG0693 consensus Myo-inositol-1-phosphate synthase [Lipid transport and metabolism]
Probab=30.17 E-value=2.6e+02 Score=21.61 Aligned_cols=59 Identities=8% Similarity=0.062 Sum_probs=35.6
Q ss_pred HHHHHHhhcCCeEEEEEcCCCCCCCCCC--CCc-hHHHHHHHHHHHHHHHHHhCCCCeEEEE
Q 031716 44 WKDMLGKALDAVEVVTFDYPYIAGGKRK--APP-KAEKLVEFHTDVVKGAVAKFPGHPLILA 102 (154)
Q Consensus 44 ~~~~~~~l~~~~~v~~~d~~g~g~~~~~--~~~-~~~~~~~~~~~~i~~~~~~~~~~~i~l~ 102 (154)
....++.+.+.-.++.||+-....+.+. ... ......+.+.++++.++++...++++++
T Consensus 167 l~p~me~~~PlPsIy~PdFIAaNQ~~RAnnvI~g~~keqle~Ir~Dir~Fke~~~ldkViVL 228 (512)
T KOG0693|consen 167 LRPFMENLVPLPSIYDPDFIAANQGSRANNVIKGTKKEQLEQIRKDIREFKEENKLDKVIVL 228 (512)
T ss_pred HHHHHhhccCCCcccCcchhhcCccccccccccCchHHHHHHHHHHHHHHHHhcCCceEEEE
Confidence 3444555555567777777643222221 111 2345678889999999998877776654
No 325
>TIGR00365 monothiol glutaredoxin, Grx4 family. The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation.
Probab=30.08 E-value=1.2e+02 Score=17.89 Aligned_cols=82 Identities=12% Similarity=0.044 Sum_probs=47.0
Q ss_pred CCCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeEE
Q 031716 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLI 100 (154)
Q Consensus 21 ~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~ 100 (154)
++.+++||..|......+++.....+++..+.-.|. .+|..- . .+..+.+...........++
T Consensus 10 ~~~~Vvvf~kg~~~~~~Cp~C~~ak~lL~~~~i~~~--~~di~~-------~--------~~~~~~l~~~tg~~tvP~vf 72 (97)
T TIGR00365 10 KENPVVLYMKGTPQFPQCGFSARAVQILKACGVPFA--YVNVLE-------D--------PEIRQGIKEYSNWPTIPQLY 72 (97)
T ss_pred ccCCEEEEEccCCCCCCCchHHHHHHHHHHcCCCEE--EEECCC-------C--------HHHHHHHHHHhCCCCCCEEE
Confidence 356889999887555556666667778877433344 334321 0 11222233332222334677
Q ss_pred EEEeCcchHHHHHHHhhcC
Q 031716 101 LAGKSMGSRVSCMVACKED 119 (154)
Q Consensus 101 l~G~S~Gg~~a~~~a~~~~ 119 (154)
+-|.-.||.-.+..+.+..
T Consensus 73 i~g~~iGG~ddl~~l~~~g 91 (97)
T TIGR00365 73 VKGEFVGGCDIIMEMYQSG 91 (97)
T ss_pred ECCEEEeChHHHHHHHHCc
Confidence 7788899987777665543
No 326
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=29.89 E-value=45 Score=24.40 Aligned_cols=17 Identities=18% Similarity=0.395 Sum_probs=14.9
Q ss_pred EEEEeCcchHHHHHHHh
Q 031716 100 ILAGKSMGSRVSCMVAC 116 (154)
Q Consensus 100 ~l~G~S~Gg~~a~~~a~ 116 (154)
.+.|-|.||.+|..++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 47899999999998875
No 327
>KOG3086 consensus Predicted dioxygenase [General function prediction only]
Probab=29.83 E-value=1.9e+02 Score=20.99 Aligned_cols=54 Identities=13% Similarity=0.150 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHhC----CCCeEEEE---EeCcchHHHHHHHhh-cCccccEEEEeccCccc
Q 031716 81 EFHTDVVKGAVAKF----PGHPLILA---GKSMGSRVSCMVACK-EDIAASAVLCLGYPLKV 134 (154)
Q Consensus 81 ~~~~~~i~~~~~~~----~~~~i~l~---G~S~Gg~~a~~~a~~-~~~~i~~~v~~~~p~~~ 134 (154)
.++.+.++.++.+. +..+.+|. |.++-|..|...-++ .|..++++.+++|..+.
T Consensus 20 ~~Ls~QL~~wL~~~~~~~~paRaiIaPHAGY~YcG~~Aa~ay~qvdps~v~RIFILGPSHHv 81 (296)
T KOG3086|consen 20 PQLSAQLEGWLSQVTLTKGPARAIIAPHAGYTYCGSCAAYAYKQVDPSNVQRIFILGPSHHV 81 (296)
T ss_pred HHHHHHHHHHHhccCCCCCCceEEEcCCCCcccchHHHHHHHhhcChhHeeEEEEecCccee
Confidence 34444445454432 33355554 888877766654444 77889999999886543
No 328
>COG1751 Uncharacterized conserved protein [Function unknown]
Probab=29.77 E-value=1.7e+02 Score=19.47 Aligned_cols=43 Identities=7% Similarity=-0.037 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHhCCCCeEEEEEeCcchHHHHHHHhhcCccccEEE
Q 031716 82 FHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACKEDIAASAVL 126 (154)
Q Consensus 82 ~~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v 126 (154)
+..+....-.++++.+++++. |.-|+.|+.++..-+..++-++
T Consensus 14 ~tle~a~erA~elgik~~vVA--S~tG~tA~k~lemveg~lkvVv 56 (186)
T COG1751 14 ETLEIAVERAKELGIKHIVVA--SSTGYTALKALEMVEGDLKVVV 56 (186)
T ss_pred HHHHHHHHHHHhcCcceEEEE--ecccHHHHHHHHhcccCceEEE
Confidence 333333334445677766655 6678888888877555444333
No 329
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=29.71 E-value=85 Score=20.38 Aligned_cols=31 Identities=23% Similarity=0.184 Sum_probs=20.8
Q ss_pred HHHHHHHHhCC-CCeEEEEEeCcchHHHHHHH
Q 031716 85 DVVKGAVAKFP-GHPLILAGKSMGSRVSCMVA 115 (154)
Q Consensus 85 ~~i~~~~~~~~-~~~i~l~G~S~Gg~~a~~~a 115 (154)
-+++.+.++.. ...-.+.|.|.|+.++..++
T Consensus 15 gvl~~l~~~~~~~~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 15 GVLSALAERGLLDCVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred HHHHHHHHhCCccCCCEEEEEcHHHHHHHHHh
Confidence 34444544322 14556789999999999887
No 330
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=29.33 E-value=48 Score=24.07 Aligned_cols=18 Identities=33% Similarity=0.423 Sum_probs=16.0
Q ss_pred EEEEeCcchHHHHHHHhh
Q 031716 100 ILAGKSMGSRVSCMVACK 117 (154)
Q Consensus 100 ~l~G~S~Gg~~a~~~a~~ 117 (154)
.+.|-|.||.+|..++..
T Consensus 37 ~i~GTSaGaiia~~la~g 54 (288)
T cd07213 37 LFAGTSAGSLIALGLALG 54 (288)
T ss_pred EEEEeCHHHHHHHHHHcC
Confidence 678999999999998865
No 331
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=29.19 E-value=86 Score=23.49 Aligned_cols=33 Identities=33% Similarity=0.502 Sum_probs=23.6
Q ss_pred HHHHHHHHHhCCCCeEEEEEeCcchHHHHHHHhh
Q 031716 84 TDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACK 117 (154)
Q Consensus 84 ~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 117 (154)
..+++.+.++ +..+-++.|-|.|+.+|..++..
T Consensus 84 ~GVlkaL~e~-gl~p~~i~GsSaGAivaa~~~~~ 116 (323)
T cd07231 84 VGVVRTLVEH-QLLPRVIAGSSVGSIVCAIIATR 116 (323)
T ss_pred HHHHHHHHHc-CCCCCEEEEECHHHHHHHHHHcC
Confidence 4455555554 44455689999999999988764
No 332
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=29.09 E-value=28 Score=24.55 Aligned_cols=39 Identities=18% Similarity=0.273 Sum_probs=25.1
Q ss_pred CCcEEEEecCCCCCCCchHHHHHHHHHHhhc-CCeEEEEEcCC
Q 031716 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKAL-DAVEVVTFDYP 63 (154)
Q Consensus 22 ~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~-~~~~v~~~d~~ 63 (154)
+.|+||++.|+-++.... ....+...+. .+++|.++.-|
T Consensus 29 ~~~vlIl~eG~d~sGKg~---~I~~l~~~lDPR~~~v~~~~~p 68 (228)
T PF03976_consen 29 GIPVLILFEGWDASGKGG---TINRLIEWLDPRGFRVHAFGKP 68 (228)
T ss_dssp HHEEEEEEEESTTSSHHH---HHHHHHCCS-GGGEEEEE-SS-
T ss_pred CCcEEEEEeccccCCchH---HHHHHHHhCCCCeeEEEeCCCC
Confidence 357999999988765322 3555666554 68999998643
No 333
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=28.77 E-value=57 Score=23.09 Aligned_cols=35 Identities=26% Similarity=0.332 Sum_probs=23.4
Q ss_pred HHHHHHHHHhCCC-Ce--EEEEEeCcchHHHHHHHhhc
Q 031716 84 TDVVKGAVAKFPG-HP--LILAGKSMGSRVSCMVACKE 118 (154)
Q Consensus 84 ~~~i~~~~~~~~~-~~--i~l~G~S~Gg~~a~~~a~~~ 118 (154)
+-+++.+.++... .+ -.+.|-|+|+.++..++...
T Consensus 15 ~GVl~~L~e~g~~l~~~~~~i~GtSAGAl~aa~~a~g~ 52 (243)
T cd07204 15 VGVASALREHAPRLLQNARRIAGASAGAIVAAVVLCGV 52 (243)
T ss_pred HHHHHHHHHcCcccccCCCEEEEEcHHHHHHHHHHhCC
Confidence 3455555554211 11 37899999999999988764
No 334
>PLN00222 tubulin gamma chain; Provisional
Probab=28.77 E-value=2.8e+02 Score=21.92 Aligned_cols=33 Identities=9% Similarity=0.005 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHHHhCCCCeEEEEEeCcchHH
Q 031716 78 KLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRV 110 (154)
Q Consensus 78 ~~~~~~~~~i~~~~~~~~~~~i~l~G~S~Gg~~ 110 (154)
...+++.+.++..++..+.-.-+++=||+||..
T Consensus 113 ~~~d~i~d~ir~~~E~cd~l~gf~i~~sl~GGT 145 (454)
T PLN00222 113 QVEEDIMDMIDREADGSDSLEGFVLCHSIAGGT 145 (454)
T ss_pred HHHHHHHHHHHHHHHhCCCccceEEeecCCCCc
Confidence 344556666666666665556677778887643
No 335
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=28.68 E-value=95 Score=22.19 Aligned_cols=35 Identities=14% Similarity=0.119 Sum_probs=23.3
Q ss_pred HHHHHHHHHhCCC---CeEEEEEeCcchHHHHHHHhhc
Q 031716 84 TDVVKGAVAKFPG---HPLILAGKSMGSRVSCMVACKE 118 (154)
Q Consensus 84 ~~~i~~~~~~~~~---~~i~l~G~S~Gg~~a~~~a~~~ 118 (154)
+-+++.+.++... ..-.+.|-|+|+..+..++...
T Consensus 20 ~GVl~~L~e~g~~l~~~~~~i~G~SAGAl~aa~~a~g~ 57 (249)
T cd07220 20 VGVASCLLEHAPFLVANARKIYGASAGALTATALVTGV 57 (249)
T ss_pred HHHHHHHHhcCCcccccCCeEEEEcHHHHHHHHHHcCC
Confidence 4455556555211 1345789999999999888754
No 336
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=28.25 E-value=53 Score=24.71 Aligned_cols=18 Identities=28% Similarity=0.458 Sum_probs=15.5
Q ss_pred EEEEeCcchHHHHHHHhh
Q 031716 100 ILAGKSMGSRVSCMVACK 117 (154)
Q Consensus 100 ~l~G~S~Gg~~a~~~a~~ 117 (154)
.+.|-|.||.+|..++..
T Consensus 44 lIaGTStGgIIAa~la~g 61 (344)
T cd07217 44 FVGGTSTGSIIAACIALG 61 (344)
T ss_pred EEEEecHHHHHHHHHHcC
Confidence 577999999999988863
No 337
>PRK15219 carbonic anhydrase; Provisional
Probab=27.27 E-value=1.1e+02 Score=21.87 Aligned_cols=33 Identities=12% Similarity=0.032 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHhCCCCeEEEEEeCcchHHHHHH
Q 031716 82 FHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMV 114 (154)
Q Consensus 82 ~~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~ 114 (154)
+....+++.+..++.+.|+++|||-=|.+...+
T Consensus 128 ~~~~slEyAv~~L~v~~IvVlGHt~CGav~Aa~ 160 (245)
T PRK15219 128 DLLGSMEFACAVAGAKVVLVMGHTACGAVKGAI 160 (245)
T ss_pred chhhHHHHHHHHcCCCEEEEecCCcchHHHHHH
Confidence 456688899999999999999999876665544
No 338
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=26.97 E-value=1.1e+02 Score=22.69 Aligned_cols=24 Identities=17% Similarity=0.470 Sum_probs=20.1
Q ss_pred CCCCeEEEEEeC--cchHHHHHHHhh
Q 031716 94 FPGHPLILAGKS--MGSRVSCMVACK 117 (154)
Q Consensus 94 ~~~~~i~l~G~S--~Gg~~a~~~a~~ 117 (154)
+..+++.++|.| +|..++..+..+
T Consensus 157 l~Gk~V~vIG~s~ivG~PmA~~L~~~ 182 (301)
T PRK14194 157 LTGKHAVVIGRSNIVGKPMAALLLQA 182 (301)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHC
Confidence 456799999997 999999988865
No 339
>COG0813 DeoD Purine-nucleoside phosphorylase [Nucleotide transport and metabolism]
Probab=26.89 E-value=2.4e+02 Score=20.09 Aligned_cols=39 Identities=15% Similarity=0.336 Sum_probs=24.1
Q ss_pred hCCCCeEEEEEeCcchHHHHHHHhh--cCccccEEEEeccC
Q 031716 93 KFPGHPLILAGKSMGSRVSCMVACK--EDIAASAVLCLGYP 131 (154)
Q Consensus 93 ~~~~~~i~l~G~S~Gg~~a~~~a~~--~~~~i~~~v~~~~p 131 (154)
.++.+++.+.||.||=.-...++.. .--.++.++-+++.
T Consensus 52 tYKGk~iSvmg~GmGipS~sIY~~ELi~~y~Vk~iIRvGt~ 92 (236)
T COG0813 52 TYKGKKISVMGHGMGIPSISIYSRELITDYGVKKIIRVGTC 92 (236)
T ss_pred eecCcEEEEEEecCCCccHHHHHHHHHHHhCcceEEEEEcc
Confidence 3566788888998886555555443 11246666666543
No 340
>COG3675 Predicted lipase [Lipid metabolism]
Probab=26.56 E-value=40 Score=24.91 Aligned_cols=46 Identities=20% Similarity=0.348 Sum_probs=30.0
Q ss_pred HHHHHHHhCCC-CeEEEEEeCcchHHHHHHHh----hcCccccEEEEeccC
Q 031716 86 VVKGAVAKFPG-HPLILAGKSMGSRVSCMVAC----KEDIAASAVLCLGYP 131 (154)
Q Consensus 86 ~i~~~~~~~~~-~~i~l~G~S~Gg~~a~~~a~----~~~~~i~~~v~~~~p 131 (154)
..+.+++..+. ..+.+.|||-|+.++...+. ++|.....++..+.|
T Consensus 163 q~~~lleeiP~~Yrig~tghS~g~aii~vrGtyfe~k~p~vdnlv~tf~~P 213 (332)
T COG3675 163 QEQTLLEEIPQGYRIGITGHSSGGAIICVRGTYFERKYPRVDNLVVTFGQP 213 (332)
T ss_pred HHHHHHHhcccceEEEEEeecCCccEEEEeccchhcccCCcccceeeccCC
Confidence 44555666655 57899999999998775554 344433344466666
No 341
>PF04446 Thg1: tRNAHis guanylyltransferase; InterPro: IPR007537 The Thg1 protein from Saccharomyces cerevisiae (Baker's yeast) is responsible for adding a GMP residue to the 5' end of tRNA His [].; PDB: 3OTE_A 3OTC_A 3OTD_A 3OTB_A.
Probab=26.43 E-value=1.8e+02 Score=18.67 Aligned_cols=52 Identities=19% Similarity=0.268 Sum_probs=31.2
Q ss_pred cCCeEEEEEcCCCCCC---C-CCCCCchHHHHHHHHHHHHHHHHHhCCCCeEEEEEeC
Q 031716 52 LDAVEVVTFDYPYIAG---G-KRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKS 105 (154)
Q Consensus 52 ~~~~~v~~~d~~g~g~---~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~G~S 105 (154)
...+.|+.+|-+++.. . .-..|.+ ....+.+.+....+++..+ +.+...|+|
T Consensus 18 p~~~ivvRiDG~~F~kft~~~~f~KP~D-~r~~~~M~~aa~~l~~~~~-~~~~aY~~S 73 (135)
T PF04446_consen 18 PNTPIVVRIDGRGFHKFTKRHGFEKPND-ERFLKAMNEAAKALMEEFP-DIVLAYGQS 73 (135)
T ss_dssp TTSEEEEEEEETTHHHHHHHTT--SS---HHHHHHHHHHHHHHHHHSS-SEEEEEEET
T ss_pred CCCeEEEEEeCcchhhhcccCCCCCCCC-HHHHHHHHHHHHHHHHhCC-CcEEEEEcC
Confidence 3689999999887641 1 1112222 3345667777778888776 455555665
No 342
>PF00484 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Carbonic anhydrases (4.2.1.1 from EC) (CA) are zinc metalloenzymes which catalyze the reversible hydration of carbon dioxide. In Escherichia coli, CA (gene cynT) is involved in recycling carbon dioxide formed in the bicarbonate-dependent decomposition of cyanate by cyanase (gene cynS). By this action, it prevents the depletion of cellular bicarbonate []. In photosynthetic bacteria and plant chloroplast, CA is essential to inorganic carbon fixation []. Prokaryotic and plant chloroplast CA are structurally and evolutionary related and form a family distinct from the one which groups the many different forms of eukaryotic CA's (see IPR001148 from INTERPRO). Hypothetical proteins yadF from Escherichia coli and HI1301 from Haemophilus influenzae also belong to this family. This family also includes, YbcF and related proteins, which are inactive homologues of bacterial carbonic anhydrase.; GO: 0004089 carbonate dehydratase activity, 0008270 zinc ion binding; PDB: 1DDZ_B 3LAS_A 2W3N_A 2W3Q_A 1G5C_F 3E2A_A 3E2X_B 2A8C_A 2A8D_D 3E3F_A ....
Probab=26.26 E-value=1.8e+02 Score=18.60 Aligned_cols=34 Identities=12% Similarity=0.142 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEEeCcchHHHHHH
Q 031716 81 EFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMV 114 (154)
Q Consensus 81 ~~~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~ 114 (154)
.+....+++.+..++.+.|+++||+-=|.+...+
T Consensus 39 ~~~~~sle~av~~l~v~~IiV~gHt~CGa~~~~~ 72 (153)
T PF00484_consen 39 DSALASLEYAVYHLGVKEIIVCGHTDCGAIKAAL 72 (153)
T ss_dssp HHHHHHHHHHHHTST-SEEEEEEETT-HHHHHHH
T ss_pred cchhhheeeeeecCCCCEEEEEcCCCchHHHHHH
Confidence 5566778888888999999999999877776443
No 343
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=26.26 E-value=1.6e+02 Score=17.90 Aligned_cols=74 Identities=14% Similarity=0.137 Sum_probs=42.5
Q ss_pred EEEEecCCCCCCCchHHHHHHHHHHhhc-C-CeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCC-CCeEEE
Q 031716 25 VVVFAHGAGAPSSSDWMIKWKDMLGKAL-D-AVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFP-GHPLIL 101 (154)
Q Consensus 25 ~il~lHG~~~~~~~~~~~~~~~~~~~l~-~-~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~i~l 101 (154)
.||..||..+ . .+.+.++.+. . ...+.++++.- .. ..+++.+.++..+++.+ .+.+.+
T Consensus 2 iii~sHG~~A---~----g~~~~~~~i~G~~~~~i~~~~~~~--------~~----~~~~~~~~l~~~i~~~~~~~~vli 62 (116)
T PF03610_consen 2 IIIASHGSLA---E----GLLESAEMILGEDQDNIEAVDLYP--------DE----SIEDFEEKLEEAIEELDEGDGVLI 62 (116)
T ss_dssp EEEEEETTHH---H----HHHHHHHHHHTSTCSSEEEEEETT--------TS----CHHHHHHHHHHHHHHCCTTSEEEE
T ss_pred EEEEECcHHH---H----HHHHHHHHHcCCCcccEEEEECcC--------CC----CHHHHHHHHHHHHHhccCCCcEEE
Confidence 5788899332 1 3444444443 3 23566666542 01 13555666666666654 567888
Q ss_pred EEeCcchHHHHHHHhh
Q 031716 102 AGKSMGSRVSCMVACK 117 (154)
Q Consensus 102 ~G~S~Gg~~a~~~a~~ 117 (154)
+.-=.||-..-..+..
T Consensus 63 l~Dl~ggsp~n~a~~~ 78 (116)
T PF03610_consen 63 LTDLGGGSPFNEAARL 78 (116)
T ss_dssp EESSTTSHHHHHHHHH
T ss_pred EeeCCCCccchHHHHH
Confidence 8888887666555554
No 344
>PRK13018 cell division protein FtsZ; Provisional
Probab=26.25 E-value=3.1e+02 Score=21.16 Aligned_cols=36 Identities=25% Similarity=0.385 Sum_probs=21.2
Q ss_pred CchHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCcchHHH
Q 031716 73 PPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVS 111 (154)
Q Consensus 73 ~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a 111 (154)
+.......++..+.++..++ ....+++-+|+||...
T Consensus 92 p~~G~~aaee~~d~I~~~le---~~D~vfI~aGLGGGTG 127 (378)
T PRK13018 92 PEVGRKAAEESRDEIKEVLK---GADLVFVTAGMGGGTG 127 (378)
T ss_pred hHHHHHHHHHHHHHHHHHhc---CCCEEEEEeeccCcch
Confidence 33334445555555655554 3445888899998553
No 345
>PRK14538 putative bifunctional signaling protein/50S ribosomal protein L9; Provisional
Probab=26.13 E-value=3.7e+02 Score=23.29 Aligned_cols=52 Identities=12% Similarity=0.185 Sum_probs=33.0
Q ss_pred CCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeEEEEEe------CcchHHHHHHHh
Q 031716 63 PYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGK------SMGSRVSCMVAC 116 (154)
Q Consensus 63 ~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~G~------S~Gg~~a~~~a~ 116 (154)
+.+|+.+..............+..+..+++. .++++|+|| +.|+++|+....
T Consensus 336 ~fyGGks~~~eKrtrVraRvia~~L~elI~~--~d~ViI~gH~nPD~DAlGSalaL~~~l 393 (838)
T PRK14538 336 KYFGAKIASLSKQSKVNARVNAQNLVDILKK--NPHCFIMGHNHTDLDSLGSMIAFYKIA 393 (838)
T ss_pred eEeCCCCCcccchhhHHHHHHHHHHHHHHhc--CCeEEEEecCCCCchHHHHHHHHHHHH
Confidence 3454444433344444556666667777654 458999998 579999887654
No 346
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=25.57 E-value=1.6e+02 Score=19.55 Aligned_cols=38 Identities=13% Similarity=0.253 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEEEeC--cchHHHHHHHhh
Q 031716 80 VEFHTDVVKGAVAKFPGHPLILAGKS--MGSRVSCMVACK 117 (154)
Q Consensus 80 ~~~~~~~i~~~~~~~~~~~i~l~G~S--~Gg~~a~~~a~~ 117 (154)
.....+.+++.--.+..+++.++|.| -|-.++..+..+
T Consensus 20 p~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~ 59 (160)
T PF02882_consen 20 PLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNK 59 (160)
T ss_dssp HHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhC
Confidence 34444444443333567799999999 577777777765
No 347
>PLN00416 carbonate dehydratase
Probab=25.48 E-value=1.4e+02 Score=21.54 Aligned_cols=34 Identities=15% Similarity=0.153 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHhCCCCeEEEEEeCcchHHHHHHH
Q 031716 82 FHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVA 115 (154)
Q Consensus 82 ~~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a 115 (154)
.....+++.+..++.+.|+++|||-=|.+...+.
T Consensus 125 ~~~asLEyAv~~L~V~~IVV~GHs~CGaV~Aa~~ 158 (258)
T PLN00416 125 GVGAAVEYAVVHLKVENILVIGHSCCGGIKGLMS 158 (258)
T ss_pred cchhHHHHHHHHhCCCEEEEecCCCchHHHHHHh
Confidence 3556788888889999999999998776655443
No 348
>cd02190 epsilon_tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa. The epsilon-tubulins which are widespread but not ubiquitous among eukaryotes play a role in basal body/centriole morphogenesis.
Probab=25.40 E-value=3.1e+02 Score=20.98 Aligned_cols=34 Identities=12% Similarity=0.168 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHHHHhCCCCeEEEEEeCcchHH
Q 031716 77 EKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRV 110 (154)
Q Consensus 77 ~~~~~~~~~~i~~~~~~~~~~~i~l~G~S~Gg~~ 110 (154)
....++..+.++..++..+.-.-+++=||+||..
T Consensus 79 ~~~~~~~~d~ir~~~E~cd~l~gf~i~~sl~GGT 112 (379)
T cd02190 79 HQYIDSILEKIRKAAEKCDSLQSFFILHSLGGGT 112 (379)
T ss_pred hhHHHHHHHHHHHHHhhCcCcceEEEEeecCCCc
Confidence 3455677788888888776555677778887643
No 349
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=25.36 E-value=2.6e+02 Score=25.81 Aligned_cols=27 Identities=15% Similarity=0.129 Sum_probs=19.9
Q ss_pred HHHHHHHHHHhCCCCeEEEEEeCcchH
Q 031716 83 HTDVVKGAVAKFPGHPLILAGKSMGSR 109 (154)
Q Consensus 83 ~~~~i~~~~~~~~~~~i~l~G~S~Gg~ 109 (154)
+.-.+.+++..++..+=.|+|||.|-.
T Consensus 568 iQiaLtDlLs~lgi~PDGIvGHS~GEl 594 (2376)
T KOG1202|consen 568 IQIALTDLLSCLGIRPDGIVGHSLGEL 594 (2376)
T ss_pred HHHHHHHHHHhcCCCCCcccccccchh
Confidence 333455666777888889999999854
No 350
>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from Salmonella typhimurium []., and CobQ from Rhodobacter capsulatus []. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria [].; PDB: 3K9G_A 3K9H_B 3EZ9_B 3EZF_A 3EZ2_B 3EZ6_A 3EZ7_A 1G3Q_A 1G3R_A 1DTS_A ....
Probab=25.23 E-value=1.2e+02 Score=20.00 Aligned_cols=33 Identities=15% Similarity=0.284 Sum_probs=20.2
Q ss_pred EecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcC
Q 031716 28 FAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDY 62 (154)
Q Consensus 28 ~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~ 62 (154)
+.++-||...+.....++..+.. .|++|+.+|.
T Consensus 3 v~~~kGG~GKTt~a~~la~~la~--~g~~VlliD~ 35 (195)
T PF01656_consen 3 VTSGKGGVGKTTIAANLAQALAR--KGKKVLLIDL 35 (195)
T ss_dssp EEESSTTSSHHHHHHHHHHHHHH--TTS-EEEEEE
T ss_pred EEcCCCCccHHHHHHHHHhcccc--cccccccccc
Confidence 44444444435444456666666 8999999996
No 351
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=24.70 E-value=2.1e+02 Score=19.85 Aligned_cols=38 Identities=26% Similarity=0.428 Sum_probs=23.2
Q ss_pred CCCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcC
Q 031716 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDY 62 (154)
Q Consensus 21 ~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~ 62 (154)
...|.+++.||+++...... .+...+.. .++.+...+.
T Consensus 47 ~~~p~v~~~h~~~~~~~~~~--~~~~~l~~--~~~~~~~~~~ 84 (299)
T COG1073 47 KKLPAVVFLHGFGSSKEQSL--GYAVLLAE--KGYRVLAGDA 84 (299)
T ss_pred ccCceEEeccCccccccCcc--hHHHHhhh--ceeEEeeecc
Confidence 45788999999998875311 12222222 5677666654
No 352
>PRK00889 adenylylsulfate kinase; Provisional
Probab=24.64 E-value=2e+02 Score=18.72 Aligned_cols=37 Identities=16% Similarity=0.187 Sum_probs=22.4
Q ss_pred CcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEc
Q 031716 23 SPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFD 61 (154)
Q Consensus 23 ~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d 61 (154)
++.++.+.|..++..+.........+.. .+..+..+|
T Consensus 3 ~g~~i~~~G~~GsGKST~a~~la~~l~~--~g~~v~~id 39 (175)
T PRK00889 3 RGVTVWFTGLSGAGKTTIARALAEKLRE--AGYPVEVLD 39 (175)
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHHH--cCCeEEEEc
Confidence 3458888898887655444444444433 466666664
No 353
>cd06059 Tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa. The alpha- and beta-tubulins are the major components of microtubules, while gamma-tubulin plays a major role in the nucleation of microtubule assembly. The delta- and epsilon-tubulins are widespread but unlike the alpha, beta, and gamma-tubulins they are not ubiquitous among eukaryotes. The alpha/beta-tubulin heterodimer is the structural subunit of microtubules. The alpha- and beta-tubulins share 40% amino-acid sequence identity, exist in several isotype forms, and undergo a variety of posttranslational modifications. The structures of alpha- and beta-tubulin are basically identical: each monomer is formed by a core of two beta-sheets surrounded by alpha-helices. The monomer structure is very compact, but can be divided into three regions based on function: the amino-termi
Probab=24.62 E-value=2.3e+02 Score=21.65 Aligned_cols=33 Identities=18% Similarity=0.193 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHHHHhCCCCeEEEEEeCcchHH
Q 031716 78 KLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRV 110 (154)
Q Consensus 78 ~~~~~~~~~i~~~~~~~~~~~i~l~G~S~Gg~~ 110 (154)
...++..+.++..++..+.-.-+++=||+||..
T Consensus 70 ~~~e~~~d~ir~~~E~cD~l~gf~i~~sl~GGT 102 (382)
T cd06059 70 ELIDEILDRIRKQVEKCDSLQGFQITHSLGGGT 102 (382)
T ss_pred HHHHHHHHHHHHHHHhCCCcCceEEEEecCCCc
Confidence 456777788888888776555566777777643
No 354
>PLN02154 carbonic anhydrase
Probab=24.61 E-value=1.5e+02 Score=21.90 Aligned_cols=33 Identities=15% Similarity=0.262 Sum_probs=25.8
Q ss_pred HHHHHHHHHHhCCCCeEEEEEeCcchHHHHHHH
Q 031716 83 HTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVA 115 (154)
Q Consensus 83 ~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a 115 (154)
....+++.+..++.+.|+++|||-=|.+...+.
T Consensus 152 ~~aslEyAv~~L~v~~IvV~GHs~CGAV~Aal~ 184 (290)
T PLN02154 152 TNSALEFAVTTLQVENIIVMGHSNCGGIAALMS 184 (290)
T ss_pred hhhHHHHHHHHhCCCEEEEecCCCchHHHHHHh
Confidence 456788888888999999999998666655443
No 355
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=24.52 E-value=53 Score=24.45 Aligned_cols=18 Identities=28% Similarity=0.301 Sum_probs=14.4
Q ss_pred EEEEEeCcchHHHHHHHh
Q 031716 99 LILAGKSMGSRVSCMVAC 116 (154)
Q Consensus 99 i~l~G~S~Gg~~a~~~a~ 116 (154)
-.++|||+|=+.|+..+.
T Consensus 126 ~~~~GHSlGE~aA~~~AG 143 (343)
T PLN02752 126 DVCAGLSLGEYTALVFAG 143 (343)
T ss_pred CeeeeccHHHHHHHHHhC
Confidence 357999999988887664
No 356
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=24.28 E-value=1.3e+02 Score=20.13 Aligned_cols=17 Identities=24% Similarity=0.262 Sum_probs=8.2
Q ss_pred HHHHHHhhc-CCeEEEEE
Q 031716 44 WKDMLGKAL-DAVEVVTF 60 (154)
Q Consensus 44 ~~~~~~~l~-~~~~v~~~ 60 (154)
+..++..+. +||+++.+
T Consensus 170 l~~~i~~l~~~Gy~~vtl 187 (191)
T TIGR02764 170 LPTIIKKLKEKGYEFVTI 187 (191)
T ss_pred HHHHHHHHHHCCCEEEEH
Confidence 344444443 56665554
No 357
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=24.21 E-value=1.2e+02 Score=21.44 Aligned_cols=18 Identities=28% Similarity=0.403 Sum_probs=15.7
Q ss_pred EEEEeCcchHHHHHHHhh
Q 031716 100 ILAGKSMGSRVSCMVACK 117 (154)
Q Consensus 100 ~l~G~S~Gg~~a~~~a~~ 117 (154)
.+.|-|.||.+|..++..
T Consensus 37 ~i~GtS~G~iia~~l~~~ 54 (258)
T cd07199 37 LIAGTSTGGIIALGLALG 54 (258)
T ss_pred eeeeccHHHHHHHHHhcC
Confidence 468999999999988875
No 358
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=24.13 E-value=1.7e+02 Score=20.18 Aligned_cols=39 Identities=26% Similarity=0.571 Sum_probs=22.0
Q ss_pred CCCcEEEEecCCCCCCCchH-HHHHHHHHHhhcC-CeEEEEE
Q 031716 21 SSSPVVVFAHGAGAPSSSDW-MIKWKDMLGKALD-AVEVVTF 60 (154)
Q Consensus 21 ~~~~~il~lHG~~~~~~~~~-~~~~~~~~~~l~~-~~~v~~~ 60 (154)
.+++.|++.+|.+... ..| .+.|.++++.+.+ ++.|+.+
T Consensus 103 ~~~~~i~i~~~a~~~~-k~wp~e~~~~l~~~l~~~~~~vvl~ 143 (247)
T PF01075_consen 103 KDKPYIGINPGASWPS-KRWPAEKWAELIERLKERGYRVVLL 143 (247)
T ss_dssp TTSSEEEEE---SSGG-GS--HHHHHHHHHHHCCCT-EEEE-
T ss_pred ccCCeEEEeecCCCcc-ccCCHHHHHHHHHHHHhhCceEEEE
Confidence 4567788888876633 444 3568899988874 4566544
No 359
>PLN00220 tubulin beta chain; Provisional
Probab=24.08 E-value=3.6e+02 Score=21.20 Aligned_cols=34 Identities=18% Similarity=0.179 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHHHhCCCCeEEEEEeCcchHH
Q 031716 77 EKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRV 110 (154)
Q Consensus 77 ~~~~~~~~~~i~~~~~~~~~~~i~l~G~S~Gg~~ 110 (154)
....++..+.++..+++.+.-.-+++=||+||..
T Consensus 110 ~~~~~~~~d~ir~~~E~cd~l~gf~~~~sl~GGT 143 (447)
T PLN00220 110 AELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGT 143 (447)
T ss_pred HHHHHHHHHHHHHHHHhCcCcCceEEEEecCCCc
Confidence 3456778888888888876556677788887643
No 360
>COG3562 KpsS Capsule polysaccharide export protein [Cell envelope biogenesis, outer membrane]
Probab=23.88 E-value=3.4e+02 Score=20.83 Aligned_cols=85 Identities=12% Similarity=0.145 Sum_probs=51.5
Q ss_pred EEEEecCCCCCCCchHHHHHHHHHHhhc-CCeEEEEEcCCCCCCCCC---CCCchHHHHHHHHHHHHHHHHHhCCCCeEE
Q 031716 25 VVVFAHGAGAPSSSDWMIKWKDMLGKAL-DAVEVVTFDYPYIAGGKR---KAPPKAEKLVEFHTDVVKGAVAKFPGHPLI 100 (154)
Q Consensus 25 ~il~lHG~~~~~~~~~~~~~~~~~~~l~-~~~~v~~~d~~g~g~~~~---~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~ 100 (154)
.++++.|--++ .+.++...+. .+-.|+.+++-+- +..- ..........+++.+.++.++.+...+.++
T Consensus 15 NflllQGPvg~-------ff~~la~~le~~~~~v~k~NfN~G-D~~fyp~~~t~~~~~~~D~~~~~~r~f~~~hsi~aiv 86 (403)
T COG3562 15 NFLLLQGPVGP-------FFQELASWLELNGKRVFKINFNAG-DSTFYPQAGTVVYNDNLDDFPTFLRKFIAQHSIDAIV 86 (403)
T ss_pred ceEeeeCCcch-------HHHHHHHHHHhcCceEEEEeecCC-CceeeecCCccccccchhHHHHHHHHHHHhccCCceE
Confidence 57888875542 3556655554 6888999887531 1110 011223446788999999999888888888
Q ss_pred EEEeCcc-hHHHHHHHhh
Q 031716 101 LAGKSMG-SRVSCMVACK 117 (154)
Q Consensus 101 l~G~S~G-g~~a~~~a~~ 117 (154)
++|--.- =.+|..+|.+
T Consensus 87 lfgd~R~yh~iA~~va~k 104 (403)
T COG3562 87 LFGDTRLYHRIAKTVAIK 104 (403)
T ss_pred EeccchHHHHHHHHHHHh
Confidence 8875432 1234444443
No 361
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=23.84 E-value=2.2e+02 Score=18.76 Aligned_cols=37 Identities=14% Similarity=0.189 Sum_probs=24.1
Q ss_pred CcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEc
Q 031716 23 SPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFD 61 (154)
Q Consensus 23 ~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d 61 (154)
++.+|++-|..++..+.......+.+.. .+..++..|
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~~~L~~--~g~~~~~LD 37 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALERRLFA--RGIKVYLLD 37 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHHHHHHH--TTS-EEEEE
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHH--cCCcEEEec
Confidence 4678999998887655444444444444 789999998
No 362
>PRK10437 carbonic anhydrase; Provisional
Probab=23.53 E-value=1.7e+02 Score=20.63 Aligned_cols=33 Identities=24% Similarity=0.200 Sum_probs=26.0
Q ss_pred HHHHHHHHHHhCCCCeEEEEEeCcchHHHHHHH
Q 031716 83 HTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVA 115 (154)
Q Consensus 83 ~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a 115 (154)
....+++.+..++.+.|+++||+-=|.+...+.
T Consensus 77 ~~~~leyAV~~L~v~~IvV~GHt~CG~V~Aal~ 109 (220)
T PRK10437 77 CLSVVQYAVDVLEVEHIIICGHYGCGGVQAAVE 109 (220)
T ss_pred hHHHHHHHHHHcCCCEEEEeCCCCchHHHHHHc
Confidence 466778888888999999999998776665543
No 363
>PRK06696 uridine kinase; Validated
Probab=23.49 E-value=2.2e+02 Score=19.67 Aligned_cols=37 Identities=16% Similarity=0.232 Sum_probs=24.6
Q ss_pred CCCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEE
Q 031716 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVT 59 (154)
Q Consensus 21 ~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~ 59 (154)
...|.+|.+-|..++..+.+....++.+.. .|..++.
T Consensus 19 ~~~~~iI~I~G~sgsGKSTlA~~L~~~l~~--~g~~v~~ 55 (223)
T PRK06696 19 LTRPLRVAIDGITASGKTTFADELAEEIKK--RGRPVIR 55 (223)
T ss_pred CCCceEEEEECCCCCCHHHHHHHHHHHHHH--cCCeEEE
Confidence 457889999998887766555555555543 4556665
No 364
>PTZ00387 epsilon tubulin; Provisional
Probab=23.32 E-value=2.1e+02 Score=22.72 Aligned_cols=34 Identities=15% Similarity=0.240 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHHHHhCCCCeEEEEEeCcchHH
Q 031716 77 EKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRV 110 (154)
Q Consensus 77 ~~~~~~~~~~i~~~~~~~~~~~i~l~G~S~Gg~~ 110 (154)
....++..+.|+..++..+.-.-+++=||+||..
T Consensus 111 ~~~~d~~~d~Ir~~~E~cD~l~gf~i~~slgGGT 144 (465)
T PTZ00387 111 DKYIDSISESVRRQVEQCDSLQSFFLMHSLGGGT 144 (465)
T ss_pred HHHHHHHHHHHHHHHHhccCcceEEEEeecCCCc
Confidence 4456788888888888776555567778887644
No 365
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=23.25 E-value=2.9e+02 Score=19.76 Aligned_cols=35 Identities=9% Similarity=0.219 Sum_probs=26.4
Q ss_pred EEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEc
Q 031716 25 VVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFD 61 (154)
Q Consensus 25 ~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d 61 (154)
++|++-|..++..+.+....++.++. ++++++...
T Consensus 2 pLiIlTGyPgsGKTtfakeLak~L~~--~i~~vi~l~ 36 (261)
T COG4088 2 PLIILTGYPGSGKTTFAKELAKELRQ--EIWRVIHLE 36 (261)
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHH--hhhhccccc
Confidence 37888899888877777777777776 677777664
No 366
>COG0288 CynT Carbonic anhydrase [Inorganic ion transport and metabolism]
Probab=23.18 E-value=1.2e+02 Score=21.05 Aligned_cols=37 Identities=14% Similarity=0.053 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEEeCcchHHHHHHHhh
Q 031716 81 EFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVACK 117 (154)
Q Consensus 81 ~~~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 117 (154)
.+....+++.+..++.+.|+++||+-=|++...+...
T Consensus 76 ~~~l~sleyAv~~L~v~~IiV~GH~~CGav~aa~~~~ 112 (207)
T COG0288 76 GSVLRSLEYAVYVLGVKEIIVCGHTDCGAVKAALDDQ 112 (207)
T ss_pred cchhHHHHHHHHHcCCCEEEEecCCCcHHHHhccccc
Confidence 4667788888999999999999999877766655543
No 367
>KOG4127 consensus Renal dipeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=23.11 E-value=1e+02 Score=23.58 Aligned_cols=76 Identities=18% Similarity=0.110 Sum_probs=40.3
Q ss_pred CCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcC-CCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeEE
Q 031716 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDY-PYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLI 100 (154)
Q Consensus 22 ~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~-~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~ 100 (154)
.+.++||-|...-.....-..-=.++++.+.++-.++.+++ +++-. . .+ ...+.+.++.+..+++-.+.+.|.
T Consensus 265 S~APVIFSHSsA~~vcns~rNVPDdVL~llk~NgGvVMVnfy~~~is-c---~~--~A~v~~v~~Hi~hIr~VaG~~hIG 338 (419)
T KOG4127|consen 265 SRAPVIFSHSSAYSVCNSSRNVPDDVLQLLKENGGVVMVNFYPGFIS-C---SD--RATVSDVADHINHIRAVAGIDHIG 338 (419)
T ss_pred hcCceEeecccHHHHhcCccCCcHHHHHHHhhcCCEEEEEeeccccc-C---CC--cccHHHHHHHHHHHHHhhccceee
Confidence 34568999984432211111112344555554444555543 33311 1 11 223678888888887777777777
Q ss_pred EEE
Q 031716 101 LAG 103 (154)
Q Consensus 101 l~G 103 (154)
|.|
T Consensus 339 lGg 341 (419)
T KOG4127|consen 339 LGG 341 (419)
T ss_pred ccC
Confidence 665
No 368
>PLN00221 tubulin alpha chain; Provisional
Probab=22.90 E-value=3.8e+02 Score=21.12 Aligned_cols=33 Identities=15% Similarity=0.267 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHHHHhCCCCeEEEEEeCcchH
Q 031716 77 EKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSR 109 (154)
Q Consensus 77 ~~~~~~~~~~i~~~~~~~~~~~i~l~G~S~Gg~ 109 (154)
....++..+.++..++..+.-.-+++=||.||.
T Consensus 112 ~~~~~~i~d~ir~~~E~cD~l~gf~i~~Sl~GG 144 (450)
T PLN00221 112 KEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGG 144 (450)
T ss_pred HHHHHHHHHHHHHHHHhccCccceeEeeccCCC
Confidence 345677888888888877665667777887763
No 369
>cd05007 SIS_Etherase N-acetylmuramic acid 6-phosphate etherase. Members of this family contain the SIS (Sugar ISomerase) domain. The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. The bacterial cell wall sugar N-acetylmuramic acid carries a unique D-lactyl ether substituent at the C3 position. The etherase catalyzes the cleavage of the lactyl ether bond of N-acetylmuramic acid 6-phosphate.
Probab=22.90 E-value=2.9e+02 Score=19.76 Aligned_cols=36 Identities=22% Similarity=0.346 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHhC-CCCeEEEEEeCcchHHHHHHHhh
Q 031716 82 FHTDVVKGAVAKF-PGHPLILAGKSMGSRVSCMVACK 117 (154)
Q Consensus 82 ~~~~~i~~~~~~~-~~~~i~l~G~S~Gg~~a~~~a~~ 117 (154)
.+.+.++...+.+ +..+++++|..-.|.++..-+..
T Consensus 34 ~I~~av~~~~~~l~~ggrl~~~GaGtSg~la~~da~e 70 (257)
T cd05007 34 QIARAVDAAAERLRAGGRLIYVGAGTSGRLGVLDASE 70 (257)
T ss_pred HHHHHHHHHHHHHHcCCEEEEEcCcHHHHHHHHHHHh
Confidence 3444444444432 45689999999999999766654
No 370
>PF06833 MdcE: Malonate decarboxylase gamma subunit (MdcE); InterPro: IPR009648 This family consists of several bacterial malonate decarboxylase gamma subunit proteins. Malonate decarboxylase of Klebsiella pneumoniae consists of four different subunits and catalyses the conversion of malonate plus H+ to acetate and CO2. The catalysis proceeds via acetyl and malonyl thioester residues with the phosphribosyl-dephospho-CoA prosthetic group of the acyl carrier protein (ACP) subunit. MdcD and E together probably function as malonyl-S-ACP decarboxylase []. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase, while the gamma subunit appears either to mediate subunit interaction or to act as a co-decarboxylase with the beta subunit. The beta and gamma subunits exhibit some local sequence similarity.
Probab=22.90 E-value=2.9e+02 Score=19.73 Aligned_cols=60 Identities=17% Similarity=0.068 Sum_probs=33.4
Q ss_pred CCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeEE-EEEeCcchHHHHH
Q 031716 53 DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLI-LAGKSMGSRVSCM 113 (154)
Q Consensus 53 ~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~-l~G~S~Gg~~a~~ 113 (154)
+.-.+..+|-++...+.....-+........++.+...... +..-|. |+|++++|.+-..
T Consensus 64 krpIv~lVD~~sQa~grreEllGi~~alAhla~a~a~AR~~-GHpvI~Lv~G~A~SGaFLA~ 124 (234)
T PF06833_consen 64 KRPIVALVDVPSQAYGRREELLGINQALAHLAKAYALARLA-GHPVIGLVYGKAMSGAFLAH 124 (234)
T ss_pred CCCEEEEEeCCccccchHHHHhhHHHHHHHHHHHHHHHHHc-CCCeEEEEecccccHHHHHH
Confidence 56788889999865444433333343444444444433332 222233 5699998776443
No 371
>PRK15416 lipopolysaccharide core heptose(II)-phosphate phosphatase; Provisional
Probab=22.87 E-value=1.2e+02 Score=20.98 Aligned_cols=22 Identities=14% Similarity=0.221 Sum_probs=15.9
Q ss_pred HHHHHHHhCCCCeEEEEEeCcc
Q 031716 86 VVKGAVAKFPGHPLILAGKSMG 107 (154)
Q Consensus 86 ~i~~~~~~~~~~~i~l~G~S~G 107 (154)
.+..++...+.+.+.|+||+-|
T Consensus 141 ~i~~~i~~~~~~tVLIVGHnp~ 162 (201)
T PRK15416 141 AIKDLQRKSPDKNIVIFTHNHC 162 (201)
T ss_pred HHHHHHHhCCCCEEEEEeCchh
Confidence 3455556556678999999876
No 372
>PLN03019 carbonic anhydrase
Probab=22.77 E-value=1.4e+02 Score=22.43 Aligned_cols=33 Identities=12% Similarity=0.199 Sum_probs=26.1
Q ss_pred HHHHHHHHHHhCCCCeEEEEEeCcchHHHHHHH
Q 031716 83 HTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVA 115 (154)
Q Consensus 83 ~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a 115 (154)
....+++.+..++.+.|+++|||-=|.+...+.
T Consensus 201 v~aSIEYAV~~L~V~~IVV~GHs~CGaVkAal~ 233 (330)
T PLN03019 201 VGAAIEYAVLHLKVENIVVIGHSACGGIKGLMS 233 (330)
T ss_pred cchhHHHHHHHhCCCEEEEecCCCchHHHHHHh
Confidence 456788889989999999999998666655443
No 373
>COG2885 OmpA Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Cell envelope biogenesis, outer membrane]
Probab=22.67 E-value=1.8e+02 Score=19.52 Aligned_cols=27 Identities=15% Similarity=0.202 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHhCCCCeEEEEEeC
Q 031716 79 LVEFHTDVVKGAVAKFPGHPLILAGKS 105 (154)
Q Consensus 79 ~~~~~~~~i~~~~~~~~~~~i~l~G~S 105 (154)
.....++.+...+++.+..+|.|.||.
T Consensus 97 ~~~~~L~~~a~~L~~~p~~~i~V~GHT 123 (190)
T COG2885 97 KAQATLDELAKYLKKNPITRILVEGHT 123 (190)
T ss_pred hHHHHHHHHHHHHHhCCCcEEEEEecC
Confidence 345566666666777778899999994
No 374
>PTZ00335 tubulin alpha chain; Provisional
Probab=22.17 E-value=4e+02 Score=21.02 Aligned_cols=33 Identities=15% Similarity=0.265 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHHHHhCCCCeEEEEEeCcchH
Q 031716 77 EKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSR 109 (154)
Q Consensus 77 ~~~~~~~~~~i~~~~~~~~~~~i~l~G~S~Gg~ 109 (154)
....++..+.++..++..+.-.-+++=||+||.
T Consensus 112 ~~~~d~i~d~ir~~~E~cD~l~gf~i~~Sl~GG 144 (448)
T PTZ00335 112 KEIVDLCLDRIRKLADNCTGLQGFLVFHAVGGG 144 (448)
T ss_pred hhHhHHHHHHHHHhHHhccCccceeEeeccCCC
Confidence 345677888888888876655566777888764
No 375
>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=22.15 E-value=59 Score=23.84 Aligned_cols=17 Identities=24% Similarity=0.524 Sum_probs=14.9
Q ss_pred EEEEeCcchHHHHHHHh
Q 031716 100 ILAGKSMGSRVSCMVAC 116 (154)
Q Consensus 100 ~l~G~S~Gg~~a~~~a~ 116 (154)
.+.|-|.||.+|+.++.
T Consensus 45 li~GTStGgiiA~~l~~ 61 (309)
T cd07216 45 LIGGTSTGGLIAIMLGR 61 (309)
T ss_pred eeeeccHHHHHHHHhcc
Confidence 57899999999998874
No 376
>TIGR00391 hydA hydrogenase (NiFe) small subunit (hydA). Called (hupA/hydA/hupS/hoxK/vhtG) Involved in hydrogenase reactions performing different specific functions in different species eg (EC 1.12.2.1) in Desulfovibrio gigas,(EC 1.12.99.3) in Wolinella succinogenes and (EC 1.18.99.1) in E.coli and a number of other species and (EC 1.12.99.-) in the archea.
Probab=22.07 E-value=3.7e+02 Score=20.65 Aligned_cols=16 Identities=19% Similarity=0.459 Sum_probs=12.2
Q ss_pred CCCcEEEEecCCCCCC
Q 031716 21 SSSPVVVFAHGAGAPS 36 (154)
Q Consensus 21 ~~~~~il~lHG~~~~~ 36 (154)
.+++.||++||...+.
T Consensus 48 ~~~~~viWL~~~~CtG 63 (365)
T TIGR00391 48 PQRPPVIWIHAQECTG 63 (365)
T ss_pred CCCCCEEEEeCCCCCC
Confidence 4678899999965544
No 377
>PRK11789 N-acetyl-anhydromuranmyl-L-alanine amidase; Provisional
Probab=21.86 E-value=1.2e+02 Score=20.72 Aligned_cols=30 Identities=13% Similarity=0.137 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHHHHhCCCCeEEEEEeCc
Q 031716 77 EKLVEFHTDVVKGAVAKFPGHPLILAGKSM 106 (154)
Q Consensus 77 ~~~~~~~~~~i~~~~~~~~~~~i~l~G~S~ 106 (154)
....+.+++.+++++++++..+-.|+||+-
T Consensus 129 ~aQ~~aL~~L~~~L~~~y~i~~~~IvGH~d 158 (185)
T PRK11789 129 DAQYQALAALTRALRAAYPIIAERITGHSD 158 (185)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHhEEehhh
Confidence 445677777888888888775567899975
No 378
>TIGR01068 thioredoxin thioredoxin. Several proteins, such as protein disulfide isomerase, have two or more copies of a domain closely related to thioredoxin. This model is designed to recognize authentic thioredoxin, a small protein that should be hit exactly once by this model.
Probab=21.83 E-value=1.7e+02 Score=16.55 Aligned_cols=41 Identities=12% Similarity=0.053 Sum_probs=24.1
Q ss_pred CCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcC
Q 031716 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDY 62 (154)
Q Consensus 22 ~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~ 62 (154)
+++++|+++.-...........+..+.+.......++.+|.
T Consensus 14 ~~~vvi~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~ 54 (101)
T TIGR01068 14 DKPVLVDFWAPWCGPCKMIAPILEELAKEYEGKVKFVKLNV 54 (101)
T ss_pred CCcEEEEEECCCCHHHHHhCHHHHHHHHHhcCCeEEEEEEC
Confidence 45788888875443333333445555555444577777774
No 379
>KOG3734 consensus Predicted phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=21.83 E-value=2.5e+02 Score=20.58 Aligned_cols=40 Identities=15% Similarity=0.208 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCeEEEEEeCcchHHHHHHH
Q 031716 76 AEKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRVSCMVA 115 (154)
Q Consensus 76 ~~~~~~~~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~a 115 (154)
.+...+.....+..++++...+.+.|++|..+=..+....
T Consensus 174 ~e~~~~R~~~~~k~i~~k~~~~~lLIV~H~~sv~~~~~~l 213 (272)
T KOG3734|consen 174 LEDCNDRIQKVFKAIADKYPNENLLIVAHGSSVDTCSAQL 213 (272)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCceEEEeccchHHHHHHHh
Confidence 3445666777788888888888899999987755555544
No 380
>TIGR00246 tRNA_RlmH_YbeA rRNA large subunit m3Psi methyltransferase RlmH. This protein, in the SPOUT methyltransferase family, previously designated YbeA in E. coli, was shown to be responsible for a further modification, a methylation, to a pseudouridine base in ribosomal large subunit RNA.
Probab=21.81 E-value=2.5e+02 Score=18.50 Aligned_cols=51 Identities=20% Similarity=0.099 Sum_probs=27.9
Q ss_pred HHHHHHhhcCCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCcc
Q 031716 44 WKDMLGKALDAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLILAGKSMG 107 (154)
Q Consensus 44 ~~~~~~~l~~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~l~G~S~G 107 (154)
...++..+. +-.+++.|-+|- ..+..++++.+..+.+.. .+-.+++|-+.|
T Consensus 56 ~~~il~~~~-~~~~i~LDe~Gk-----------~~sS~~fA~~l~~~~~~g-~~i~FvIGGa~G 106 (153)
T TIGR00246 56 GDRILAAIG-KAHVVTLDIPGK-----------PWTTPQLADTLEKWKTDG-RDVTLLIGGPEG 106 (153)
T ss_pred HHHHHHhCC-CCeEEEEcCCCC-----------cCCHHHHHHHHHHHhccC-CeEEEEEcCCCc
Confidence 344555554 345777777762 112355666666654433 245566677766
No 381
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=21.78 E-value=2.8e+02 Score=19.08 Aligned_cols=91 Identities=13% Similarity=0.124 Sum_probs=44.2
Q ss_pred CCCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCC---C-CCC---CCc--hHHHHHHHHHHH-HHHH
Q 031716 21 SSSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAG---G-KRK---APP--KAEKLVEFHTDV-VKGA 90 (154)
Q Consensus 21 ~~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~---~-~~~---~~~--~~~~~~~~~~~~-i~~~ 90 (154)
+..+-|+++.-..... ..+...+.+.+.++. ++.+..++...... . ... ..+ .....+..|.+. +...
T Consensus 29 ~~~~~i~~IptAs~~~-~~~~~~~~~a~~~l~-G~~~~~~~~~~~~~~~~~l~~ad~I~l~GG~~~~~~~~l~~~~l~~~ 106 (212)
T cd03146 29 KARPKVLFVPTASGDR-DEYTARFYAAFESLR-GVEVSHLHLFDTEDPLDALLEADVIYVGGGNTFNLLAQWREHGLDAI 106 (212)
T ss_pred cCCCeEEEECCCCCCH-HHHHHHHHHHHhhcc-CcEEEEEeccCcccHHHHHhcCCEEEECCchHHHHHHHHHHcCHHHH
Confidence 4566788888777643 344455666666631 66666655321000 0 000 000 112222333221 2222
Q ss_pred HHhCCCCeEEEEEeCcchHHHHH
Q 031716 91 VAKFPGHPLILAGKSMGSRVSCM 113 (154)
Q Consensus 91 ~~~~~~~~i~l~G~S~Gg~~a~~ 113 (154)
++..-.+...++|-|.|+.+...
T Consensus 107 l~~~~~~g~~i~G~SAGa~i~~~ 129 (212)
T cd03146 107 LKAALERGVVYIGWSAGSNCWFP 129 (212)
T ss_pred HHHHHHCCCEEEEECHhHHhhCC
Confidence 22211234678999999988776
No 382
>PLN03014 carbonic anhydrase
Probab=21.71 E-value=1.5e+02 Score=22.52 Aligned_cols=32 Identities=13% Similarity=0.194 Sum_probs=25.6
Q ss_pred HHHHHHHHHHhCCCCeEEEEEeCcchHHHHHH
Q 031716 83 HTDVVKGAVAKFPGHPLILAGKSMGSRVSCMV 114 (154)
Q Consensus 83 ~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~~~ 114 (154)
....+++.+..++.+.|+++|||-=|.+...+
T Consensus 206 v~asLEYAV~~L~V~~IVV~GHs~CGaV~Aa~ 237 (347)
T PLN03014 206 VGAAIEYAVLHLKVENIVVIGHSACGGIKGLM 237 (347)
T ss_pred chhHHHHHHHHhCCCEEEEeCCCCchHHHHHH
Confidence 56788888998999999999999866555544
No 383
>cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E and, extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Peptidase E and cyanophycinases are thought to have a Ser-His-Glu catalytic triad which differs from
Probab=21.71 E-value=1.3e+02 Score=20.57 Aligned_cols=88 Identities=14% Similarity=0.237 Sum_probs=43.7
Q ss_pred CCcEEEEecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEcCCCCCCCCCCC-------------CchHHHHHHHHHH--H
Q 031716 22 SSPVVVFAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFDYPYIAGGKRKA-------------PPKAEKLVEFHTD--V 86 (154)
Q Consensus 22 ~~~~il~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~~~~~~-------------~~~~~~~~~~~~~--~ 86 (154)
..+-|+++.-..... ....+.+.+.++++ |+.+..+...-. ...... --+.......|.+ .
T Consensus 28 ~~~~i~~iptA~~~~-~~~~~~~~~~~~~l--G~~~~~~~~~~~-~~~~~~~~~l~~ad~I~~~GG~~~~~~~~l~~t~~ 103 (210)
T cd03129 28 AGARVLFIPTASGDR-DEYGEEYRAAFERL--GVEVVHLLLIDT-ANDPDVVARLLEADGIFVGGGNQLRLLSVLRETPL 103 (210)
T ss_pred CCCeEEEEeCCCCCh-HHHHHHHHHHHHHc--CCceEEEeccCC-CCCHHHHHHHhhCCEEEEcCCcHHHHHHHHHhCCh
Confidence 455677776665543 34445677777774 554443332210 000000 0001222333333 2
Q ss_pred HHHHHHhCCCCeEEEEEeCcchHHHHHH
Q 031716 87 VKGAVAKFPGHPLILAGKSMGSRVSCMV 114 (154)
Q Consensus 87 i~~~~~~~~~~~i~l~G~S~Gg~~a~~~ 114 (154)
++.+.+... +-..++|.|.|+++....
T Consensus 104 ~~~i~~~~~-~G~v~~G~SAGA~~~~~~ 130 (210)
T cd03129 104 LDAILKRVA-RGVVIGGTSAGAAVMGET 130 (210)
T ss_pred HHHHHHHHH-cCCeEEEcCHHHHHhhhc
Confidence 233333333 357889999999988875
No 384
>KOG0673 consensus Thymidylate synthase [Nucleotide transport and metabolism]
Probab=21.60 E-value=96 Score=22.14 Aligned_cols=49 Identities=12% Similarity=0.147 Sum_probs=26.5
Q ss_pred eEEEEEcCCCCCCCCCCCCch-HHHHHHHHHHHHHHHHHhCCCCeEEEEE
Q 031716 55 VEVVTFDYPYIAGGKRKAPPK-AEKLVEFHTDVVKGAVAKFPGHPLILAG 103 (154)
Q Consensus 55 ~~v~~~d~~g~g~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~i~l~G 103 (154)
-.|+.+.||-+|........+ ...-+++++++|..++..-...+|++.+
T Consensus 112 gpvyGfqWrHfgA~Y~~~~~dy~gqgvdQL~~vI~~ik~NP~drRIimsA 161 (293)
T KOG0673|consen 112 GPVYGFQWRHFGARYEDCDSDYTGQGVDQLADVINKIKNNPDDRRIIMSA 161 (293)
T ss_pred ccccceeeeecCccccccccccccccHHHHHHHHHHHhcCCccceeeeec
Confidence 468888888776433222221 2224567777777766543333555443
No 385
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=21.59 E-value=2.9e+02 Score=20.01 Aligned_cols=45 Identities=16% Similarity=0.218 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHhC---CCCeEEEEEeCcchHHHHHHHhhcCccccEEE
Q 031716 81 EFHTDVVKGAVAKF---PGHPLILAGKSMGSRVSCMVACKEDIAASAVL 126 (154)
Q Consensus 81 ~~~~~~i~~~~~~~---~~~~i~l~G~S~Gg~~a~~~a~~~~~~i~~~v 126 (154)
+.....++.+++++ +..++.=+|-.+|| ++..++.++.-.+.++.
T Consensus 45 ~AQ~~k~~~~~~~~~l~~G~~vLDiGcGwG~-~~~~~a~~~g~~v~git 92 (273)
T PF02353_consen 45 EAQERKLDLLCEKLGLKPGDRVLDIGCGWGG-LAIYAAERYGCHVTGIT 92 (273)
T ss_dssp HHHHHHHHHHHTTTT--TT-EEEEES-TTSH-HHHHHHHHH--EEEEEE
T ss_pred HHHHHHHHHHHHHhCCCCCCEEEEeCCCccH-HHHHHHHHcCcEEEEEE
Confidence 33444455556654 45688889999988 56666666543444443
No 386
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=21.58 E-value=3.3e+02 Score=19.81 Aligned_cols=65 Identities=15% Similarity=0.111 Sum_probs=37.2
Q ss_pred CCeEEEEEcCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCCeEE-EEEeCcchHHHHHHHhhc-CccccEEEEe
Q 031716 53 DAVEVVTFDYPYIAGGKRKAPPKAEKLVEFHTDVVKGAVAKFPGHPLI-LAGKSMGSRVSCMVACKE-DIAASAVLCL 128 (154)
Q Consensus 53 ~~~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~-l~G~S~Gg~~a~~~a~~~-~~~i~~~v~~ 128 (154)
.++.++.+|-+|.. . .....++++.+.+ +......++ ++.-++++.-+...+.++ .-.++++|+.
T Consensus 153 ~~~D~ViIDt~Gr~--~-----~~~~~l~el~~~~----~~~~~~~~~LVl~a~~~~~d~~~~~~~f~~~~~~~~I~T 219 (270)
T PRK06731 153 ARVDYILIDTAGKN--Y-----RASETVEEMIETM----GQVEPDYICLTLSASMKSKDMIEIITNFKDIHIDGIVFT 219 (270)
T ss_pred CCCCEEEEECCCCC--c-----CCHHHHHHHHHHH----hhhCCCeEEEEEcCccCHHHHHHHHHHhCCCCCCEEEEE
Confidence 37899999999841 1 1122344444333 222333344 445567777777777764 3457788764
No 387
>cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain. Functionally, proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.
Probab=21.50 E-value=1.6e+02 Score=16.28 Aligned_cols=32 Identities=19% Similarity=0.274 Sum_probs=18.5
Q ss_pred EecCCCCCCCchHHHHHHHHHHhhcCCeEEEEEc
Q 031716 28 FAHGAGAPSSSDWMIKWKDMLGKALDAVEVVTFD 61 (154)
Q Consensus 28 ~lHG~~~~~~~~~~~~~~~~~~~l~~~~~v~~~d 61 (154)
++-|.++...+.........+.+ .++++..+|
T Consensus 3 ~~~g~~G~Gktt~~~~l~~~l~~--~g~~v~~~~ 34 (99)
T cd01983 3 VVTGKGGVGKTTLAANLAAALAK--RGKRVLLID 34 (99)
T ss_pred EEECCCCCCHHHHHHHHHHHHHH--CCCeEEEEC
Confidence 34444444435444455566655 688888877
No 388
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=21.41 E-value=3.1e+02 Score=20.85 Aligned_cols=41 Identities=10% Similarity=0.196 Sum_probs=28.5
Q ss_pred HHHHHHHhCCCCeEEEEEeCcc--hHHHHHHHhhcCccccEEE
Q 031716 86 VVKGAVAKFPGHPLILAGKSMG--SRVSCMVACKEDIAASAVL 126 (154)
Q Consensus 86 ~i~~~~~~~~~~~i~l~G~S~G--g~~a~~~a~~~~~~i~~~v 126 (154)
.++.++..++..+++|+|.|-= =-+=.+++..+|++|.++.
T Consensus 267 ~l~nil~~~p~~kfvLVGDsGE~DpeIYae~v~~fP~RIl~I~ 309 (373)
T COG4850 267 SLRNILRRYPDRKFVLVGDSGEHDPEIYAEMVRCFPNRILGIY 309 (373)
T ss_pred HHHHHHHhCCCceEEEecCCCCcCHHHHHHHHHhCccceeeEe
Confidence 3454666678889999998832 2233456667899988876
No 389
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=21.19 E-value=1.5e+02 Score=20.59 Aligned_cols=34 Identities=6% Similarity=0.156 Sum_probs=19.8
Q ss_pred cEEEEecCCCCCCCchHHHHHHHHHHhhc-CCeEEEEEc
Q 031716 24 PVVVFAHGAGAPSSSDWMIKWKDMLGKAL-DAVEVVTFD 61 (154)
Q Consensus 24 ~~il~lHG~~~~~~~~~~~~~~~~~~~l~-~~~~v~~~d 61 (154)
..||++|...... .+.+..++..+. +||.++.++
T Consensus 187 g~IiLlHd~~~~t----~~aL~~ii~~lk~~Gy~fvtl~ 221 (224)
T TIGR02884 187 GAILLLHAVSKDN----AEALDKIIKDLKEQGYTFKSLD 221 (224)
T ss_pred CcEEEEECCCCCH----HHHHHHHHHHHHHCCCEEEEhH
Confidence 3588888743221 224555555554 788887664
No 390
>cd03378 beta_CA_cladeC Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=21.11 E-value=2e+02 Score=18.90 Aligned_cols=30 Identities=13% Similarity=0.079 Sum_probs=23.4
Q ss_pred HHHHHHHHHHhCCCCeEEEEEeCcchHHHH
Q 031716 83 HTDVVKGAVAKFPGHPLILAGKSMGSRVSC 112 (154)
Q Consensus 83 ~~~~i~~~~~~~~~~~i~l~G~S~Gg~~a~ 112 (154)
....+++.+..++.+.|+++|||-=|.+..
T Consensus 78 ~~~sl~yav~~l~v~~IvV~GHt~CG~~~a 107 (154)
T cd03378 78 VLGSLEYAVEVLGVPLVVVLGHESCGAVAA 107 (154)
T ss_pred HHHHHHHHHHHhCCCEEEEEcCCCccHHHH
Confidence 566778888888989999999999555443
No 391
>PF10561 UPF0565: Uncharacterised protein family UPF0565; InterPro: IPR018881 This family of proteins has no known function.
Probab=20.74 E-value=1.1e+02 Score=22.81 Aligned_cols=21 Identities=33% Similarity=0.346 Sum_probs=16.7
Q ss_pred CeEEEEEeCcchHHHHHHHhh
Q 031716 97 HPLILAGKSMGSRVSCMVACK 117 (154)
Q Consensus 97 ~~i~l~G~S~Gg~~a~~~a~~ 117 (154)
.++.|+|+|-|+.+--++..+
T Consensus 193 ~~~~LiGFSKGcvVLNqll~E 213 (303)
T PF10561_consen 193 PPLTLIGFSKGCVVLNQLLYE 213 (303)
T ss_pred CceEEEEecCcchHHHHHHHH
Confidence 389999999999886665544
No 392
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=20.64 E-value=1.8e+02 Score=17.84 Aligned_cols=23 Identities=9% Similarity=0.042 Sum_probs=15.7
Q ss_pred eEEEEE-eCcchHHHHHHHhhcCc
Q 031716 98 PLILAG-KSMGSRVSCMVACKEDI 120 (154)
Q Consensus 98 ~i~l~G-~S~Gg~~a~~~a~~~~~ 120 (154)
|+.|+| -.+.|.-.+.+..++|+
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~ 24 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPD 24 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTST
T ss_pred CEEEECCCCHHHHHHHHHHhcCCC
Confidence 466777 67777777777776665
No 393
>cd02186 alpha_tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa. The alpha- and beta-tubulins are the major components of microtubules, while gamma-tubulin plays a major role in the nucleation of microtubule assembly. The delta- and epsilon-tubulins are widespread but unlike the alpha, beta, and gamma-tubulins they are not ubiquitous among eukaryotes. The alpha/beta-tubulin heterodimer is the structural subunit of microtubules. The alpha- and beta-tubulins share 40% amino-acid sequence identity, exist in several isotype forms, and undergo a variety of posttranslational modifications. The structures of alpha- and beta-tubulin are basically identical: each monomer is formed by a core of two beta-sheets surrounded by alpha-helices. The monomer structure is very compact, but can be divided into three regions based on function: the amino
Probab=20.60 E-value=3.5e+02 Score=21.17 Aligned_cols=34 Identities=15% Similarity=0.250 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHHHHhCCCCeEEEEEeCcchHH
Q 031716 77 EKLVEFHTDVVKGAVAKFPGHPLILAGKSMGSRV 110 (154)
Q Consensus 77 ~~~~~~~~~~i~~~~~~~~~~~i~l~G~S~Gg~~ 110 (154)
....++..+.++..++..+.-.-+++=||+||..
T Consensus 111 ~~~~~~i~d~ir~~~E~cD~l~gf~i~~sl~GGT 144 (434)
T cd02186 111 KEIIDLVLDRIRKLADNCTGLQGFLIFHSFGGGT 144 (434)
T ss_pred HHHHHHHHHHHHHHHhcCCCcceeEEEeccCCCc
Confidence 3456777788888888766556677778887643
No 394
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=20.57 E-value=2.2e+02 Score=21.18 Aligned_cols=38 Identities=24% Similarity=0.513 Sum_probs=25.0
Q ss_pred CcEEEEecCCCCCCCchH-HHHHHHHHHhhc-CCeEEEEE
Q 031716 23 SPVVVFAHGAGAPSSSDW-MIKWKDMLGKAL-DAVEVVTF 60 (154)
Q Consensus 23 ~~~il~lHG~~~~~~~~~-~~~~~~~~~~l~-~~~~v~~~ 60 (154)
++.|++.||........| .+.|+++++.+. +++.|+.+
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~ 214 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLF 214 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEe
Confidence 588999999333233444 346888888876 56666665
No 395
>PF00691 OmpA: OmpA family; InterPro: IPR006665 This entry represents domain with a beta/alpha/beta/alpha-beta(2) structure found in the C-terminal region of many Gram-negative bacterial outer membrane proteins [], such as porin-like integral membrane proteins (such as ompA) [], small lipid-anchored proteins (such as pal) [], and MotB proton channels []. The N-terminal half is variable although some of the proteins in this group have the OmpA-like transmembrane domain IPR000498 from INTERPRO at the N terminus. OmpA from Escherichia coli is required for pathogenesis, and can interact with host receptor molecules []. MotB (and MotA) serves two functions in E. coli, the MotA(4)-MotB(2) complex attaches to the cell wall via MotB to form the stator of the flagellar motor, and the MotA-MotB complex couples the flow of ions across the cell membrane to movement of the rotor [].; GO: 0009279 cell outer membrane; PDB: 1OAP_A 2W8B_G 2HQS_C 4ERH_A 2ZF8_A 2ZOV_A 2ZVZ_B 2ZVY_A 3TD4_B 3TD5_D ....
Probab=20.52 E-value=1.7e+02 Score=16.80 Aligned_cols=10 Identities=10% Similarity=0.295 Sum_probs=8.3
Q ss_pred eEEEEEeCcc
Q 031716 98 PLILAGKSMG 107 (154)
Q Consensus 98 ~i~l~G~S~G 107 (154)
.|.|.||+-.
T Consensus 32 ~i~I~G~td~ 41 (97)
T PF00691_consen 32 QIEIEGHTDS 41 (97)
T ss_dssp EEEEEEEEES
T ss_pred eEEEEEEEcC
Confidence 5889999876
No 396
>PF05139 Erythro_esteras: Erythromycin esterase; InterPro: IPR007815 This family includes erythromycin esterase enzymes [, ] that confer resistance to the erythromycin antibiotic.; GO: 0046677 response to antibiotic; PDB: 2QGM_A 3B55_A 2RAD_B.
Probab=20.51 E-value=1.3e+02 Score=22.41 Aligned_cols=24 Identities=8% Similarity=0.213 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHhC-CCCeEEEEEe
Q 031716 81 EFHTDVVKGAVAKF-PGHPLILAGK 104 (154)
Q Consensus 81 ~~~~~~i~~~~~~~-~~~~i~l~G~ 104 (154)
..+++.+++++++. +.+||+++||
T Consensus 187 ~~MAenl~wl~~~~~~~~KiivwaH 211 (346)
T PF05139_consen 187 RYMAENLEWLLEHEGPDEKIIVWAH 211 (346)
T ss_dssp HHHHHHHHHHHHHH---SSEEEEEE
T ss_pred HHHHHHHHHHHHhhcccccEEEEcc
Confidence 35677788888775 5679999998
No 397
>cd07214 Pat17_isozyme_like Patatin-like phospholipase of plants. Pat17 is an isozyme of patatin cloned from Solanum cardiophyllum. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue, and Nu = nucleophile). Patatin-like phospholipase are included in this group. Members of this family have also been found in vertebrates.
Probab=20.50 E-value=71 Score=24.04 Aligned_cols=18 Identities=28% Similarity=0.613 Sum_probs=15.7
Q ss_pred EEEEeCcchHHHHHHHhh
Q 031716 100 ILAGKSMGSRVSCMVACK 117 (154)
Q Consensus 100 ~l~G~S~Gg~~a~~~a~~ 117 (154)
.+.|-|.||.+|+.++..
T Consensus 46 liaGTStGgiiA~~la~~ 63 (349)
T cd07214 46 VIAGTSTGGLITAMLTAP 63 (349)
T ss_pred EEeeCCHHHHHHHHHhcC
Confidence 578999999999999873
No 398
>COG4820 EutJ Ethanolamine utilization protein, possible chaperonin [Amino acid transport and metabolism]
Probab=20.08 E-value=2.3e+02 Score=20.02 Aligned_cols=29 Identities=17% Similarity=0.141 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCeEEEEEe
Q 031716 76 AEKLVEFHTDVVKGAVAKFPGHPLILAGK 104 (154)
Q Consensus 76 ~~~~~~~~~~~i~~~~~~~~~~~i~l~G~ 104 (154)
.....+.+++.++..++..+...++|+|-
T Consensus 207 v~PV~eKMAeIv~~hie~~~i~dl~lvGG 235 (277)
T COG4820 207 VKPVYEKMAEIVARHIEGQGITDLWLVGG 235 (277)
T ss_pred hhHHHHHHHHHHHHHhccCCCcceEEecc
Confidence 44566778888888888888889998854
No 399
>COG3621 Patatin [General function prediction only]
Probab=20.01 E-value=3.8e+02 Score=20.50 Aligned_cols=17 Identities=24% Similarity=0.370 Sum_probs=14.8
Q ss_pred EEEeCcchHHHHHHHhh
Q 031716 101 LAGKSMGSRVSCMVACK 117 (154)
Q Consensus 101 l~G~S~Gg~~a~~~a~~ 117 (154)
+.|-|.||.+++.++..
T Consensus 46 ~~GTSiGgilal~La~~ 62 (394)
T COG3621 46 IGGTSIGGILALGLALG 62 (394)
T ss_pred ecCccHHHHHHHHHhcC
Confidence 56999999999988865
Done!