Your job contains 1 sequence.
>031717
MVGFKNRYMVVEVFLDPNKELPVDDPVILTQFNVSKAIRDSILVNFGECGLASSLGSFQV
KYVNPITKLCIIRASREDCQKVWSAMTMVRSIGNCLVLFNVLDLSGSIRACKNAALKCEE
VKFEHYKLAVGARLSADVTQHMENCLEKIKILEH
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 031717
(154 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:504956160 - symbol:EMB1687 "AT1G04635" species... 509 8.5e-49 1
POMBASE|SPCC830.09c - symbol:SPCC830.09c "RNase P and RNa... 178 1.0e-13 1
DICTYBASE|DDB_G0291662 - symbol:pop5 "RNase MRP protein s... 157 1.7e-11 1
UNIPROTKB|Q969H6 - symbol:POP5 "Ribonuclease P/MRP protei... 150 9.4e-11 1
UNIPROTKB|G1K1B6 - symbol:POP5 "Ribonuclease P/MRP protei... 143 5.2e-10 1
UNIPROTKB|Q1JQ92 - symbol:POP5 "Ribonuclease P/MRP protei... 143 5.2e-10 1
RGD|1311819 - symbol:Pop5 "processing of precursor 5, rib... 143 5.2e-10 1
UNIPROTKB|F1RJI5 - symbol:POP5 "Uncharacterized protein" ... 134 4.7e-09 1
UNIPROTKB|I3LKB0 - symbol:POP5 "Uncharacterized protein" ... 134 4.7e-09 1
MGI|MGI:2151221 - symbol:Pop5 "processing of precursor 5,... 133 5.9e-09 1
UNIPROTKB|E2RE45 - symbol:POP5 "Uncharacterized protein" ... 128 2.0e-08 1
UNIPROTKB|E1C5W3 - symbol:POP5 "Uncharacterized protein" ... 126 3.3e-08 1
SGD|S000000031 - symbol:POP5 "Subunit of both RNase MRP a... 122 8.7e-08 1
FB|FBgn0036696 - symbol:CG14057 species:7227 "Drosophila ... 121 1.1e-07 1
CGD|CAL0004064 - symbol:orf19.275 species:5476 "Candida a... 98 4.7e-06 2
ZFIN|ZDB-GENE-050320-123 - symbol:pop5 "processing of pre... 100 0.00033 1
ASPGD|ASPL0000046823 - symbol:AN2437 species:162425 "Emer... 102 0.00039 1
>TAIR|locus:504956160 [details] [associations]
symbol:EMB1687 "AT1G04635" species:3702 "Arabidopsis
thaliana" [GO:0004526 "ribonuclease P activity" evidence=ISS]
[GO:0004540 "ribonuclease activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008033 "tRNA processing"
evidence=IEA;ISS] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0005773 "vacuole" evidence=IDA]
InterPro:IPR002759 Pfam:PF01900 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005773 GO:GO:0005730 GO:GO:0008033
EMBL:AC002376 PIR:B86179 GO:GO:0004526 EMBL:BT015147 EMBL:BT015896
IPI:IPI00529334 RefSeq:NP_683274.1 UniGene:At.49851
ProteinModelPortal:Q6AWV1 SMR:Q6AWV1 DNASU:839460
EnsemblPlants:AT1G04635.1 GeneID:839460 KEGG:ath:AT1G04635
TAIR:At1g04635 eggNOG:COG1369 HOGENOM:HOG000006304
InParanoid:Q6AWV1 KO:K03537 OMA:ITKLCII PhylomeDB:Q6AWV1
Genevestigator:Q6AWV1 Uniprot:Q6AWV1
Length = 151
Score = 509 (184.2 bits), Expect = 8.5e-49, P = 8.5e-49
Identities = 100/155 (64%), Positives = 128/155 (82%)
Query: 1 MVGFKNRYMVVEVFLDPNKELPVDD-PVILTQFNVSKAIRDSILVNFGECGLASSLGSFQ 59
MVGFKNRYM++EVFLDP+K+L + P+ILTQFN+SKAI+DSILVNFGECGL SSLGSFQ
Sbjct: 1 MVGFKNRYMLMEVFLDPDKDLLGEGTPIILTQFNLSKAIKDSILVNFGECGLGSSLGSFQ 60
Query: 60 VKYVNPITKLCIIRASREDCQKVWSAMTMVRSIGNCLVLFNVLDLSGSIRACKNAALKCE 119
VKYVNPITKLCI+R+SRE+ ++VW A+T+V+SIGNC V+ N+LD+SG IRAC++ ALKC+
Sbjct: 61 VKYVNPITKLCIVRSSREEHRQVWLAITLVKSIGNCPVILNLLDISGCIRACRDTALKCD 120
Query: 120 EVKFEHYKLAVGARLSADVTQHMENCLEKIKILEH 154
+ KFE + LS + + M LEKIK+LE+
Sbjct: 121 KEKFEQCSKS----LSEEEIRQMNTSLEKIKLLEN 151
>POMBASE|SPCC830.09c [details] [associations]
symbol:SPCC830.09c "RNase P and RNase MRP subunit
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000172
"ribonuclease MRP complex" evidence=ISO] [GO:0005655 "nucleolar
ribonuclease P complex" evidence=ISO] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] [GO:0006364 "rRNA processing"
evidence=ISO] [GO:0008033 "tRNA processing" evidence=ISO]
[GO:0000171 "ribonuclease MRP activity" evidence=ISO] [GO:0004526
"ribonuclease P activity" evidence=ISO] InterPro:IPR002759
Pfam:PF01900 PomBase:SPCC830.09c GO:GO:0005783 EMBL:CU329672
GO:GO:0008033 GO:GO:0006364 GO:GO:0005655 GO:GO:0000172
GO:GO:0004526 eggNOG:COG1369 KO:K03537 OMA:ITKLCII PIR:T41635
RefSeq:NP_588479.1 ProteinModelPortal:Q9UU90 STRING:Q9UU90
EnsemblFungi:SPCC830.09c.1 GeneID:2538895 KEGG:spo:SPCC830.09c
HOGENOM:HOG000216538 OrthoDB:EOG4M9522 NextBio:20800074
Uniprot:Q9UU90
Length = 139
Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 43/133 (32%), Positives = 72/133 (54%)
Query: 1 MVGFKNRYMVVEVFLDPNKELPVDDPVI-----LTQFNVSKAIRDSILVNFGECGLASSL 55
MV FK+RY++ EV KE D P I +T ++SK IR + NFG+ G+
Sbjct: 1 MVRFKSRYLLFEVLYPEAKEF-FDYPTIPSDSSITTSSLSKIIRTMVAENFGDVGIGKVA 59
Query: 56 GSFQVKYVNPITKLCIIRASREDCQKVWSAMTMVRSIGNCLVLFNVLDLSGSIRACKNAA 115
S VKY +P T I+R SR+ + W+A+ ++R + V+ V+ +SG+I+ + AA
Sbjct: 60 SSLTVKYFSPNTSTGILRVSRQHFRLAWAALVLIRELYGKPVIIRVVRVSGTIKKAELAA 119
Query: 116 LKCEEVKFEHYKL 128
++ + + + L
Sbjct: 120 IERNKSEIHNISL 132
>DICTYBASE|DDB_G0291662 [details] [associations]
symbol:pop5 "RNase MRP protein subunit" species:44689
"Dictyostelium discoideum" [GO:0016070 "RNA metabolic process"
evidence=IEA] [GO:0008033 "tRNA processing" evidence=IEA;IC]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004540 "ribonuclease
activity" evidence=IEA] [GO:0004526 "ribonuclease P activity"
evidence=IEA;ISS] [GO:0000171 "ribonuclease MRP activity"
evidence=ISS] [GO:0006364 "rRNA processing" evidence=IC]
[GO:0005655 "nucleolar ribonuclease P complex" evidence=ISS]
[GO:0000172 "ribonuclease MRP complex" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR002759 InterPro:IPR016819 Pfam:PF01900
PIRSF:PIRSF023803 dictyBase:DDB_G0291662 EMBL:AAFI02000177
GenomeReviews:CM000155_GR GO:GO:0008033 GO:GO:0006364 GO:GO:0005655
GO:GO:0000172 GO:GO:0004526 eggNOG:COG1369 KO:K03537
RefSeq:XP_635197.1 ProteinModelPortal:Q54EP3
EnsemblProtists:DDB0237627 GeneID:8628142 KEGG:ddi:DDB_G0291662
OMA:FQFISNE ProtClustDB:CLSZ2429561 Uniprot:Q54EP3
Length = 171
Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 39/118 (33%), Positives = 65/118 (55%)
Query: 1 MVGFKNRYMVVEVFLDPN-KELPVDDPVILTQFNVSKAIRDSILVNFGECGLASSLGSFQ 59
MV KNRY++ EV N K + D + QF +S +++ + GE + + +
Sbjct: 1 MVRLKNRYLMTEVIWHDNEKSTQLSDSWLF-QF-ISNEVKEKL----GELTYEAFKKTLK 54
Query: 60 VKYVNPITKLCIIRASREDCQKVWSAMTMVRSIGNCLVLFNVLDLSGSIRACKNAALK 117
+ YVNP T + IIR S E + +W+A+T++ S + F ++ + GSIR C+ AA+K
Sbjct: 55 IIYVNPDTNIFIIRVSFEYYKSLWTALTLITSYYGVPIYFRMVHVGGSIRLCQKAAIK 112
>UNIPROTKB|Q969H6 [details] [associations]
symbol:POP5 "Ribonuclease P/MRP protein subunit POP5"
species:9606 "Homo sapiens" [GO:0004526 "ribonuclease P activity"
evidence=IEA] [GO:0005655 "nucleolar ribonuclease P complex"
evidence=IEA] [GO:0008033 "tRNA processing" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR002759
InterPro:IPR016819 Pfam:PF01900 PIRSF:PIRSF023803 EMBL:CH471054
GO:GO:0008033 GO:GO:0005655 GO:GO:0004526 KO:K03537 CTD:51367
HOGENOM:HOG000293345 HOVERGEN:HBG082157 OrthoDB:EOG49W2GX
eggNOG:NOG284693 OMA:CEVVSDD EMBL:AJ306296 EMBL:AF117232
EMBL:AF070660 EMBL:AK303144 EMBL:AK223206 EMBL:AC063943
EMBL:BC012505 IPI:IPI00107563 IPI:IPI00377084 RefSeq:NP_057002.2
RefSeq:NP_937845.1 UniGene:Hs.279913 ProteinModelPortal:Q969H6
SMR:Q969H6 IntAct:Q969H6 STRING:Q969H6 PhosphoSite:Q969H6
DMDM:74731042 PRIDE:Q969H6 Ensembl:ENST00000341039
Ensembl:ENST00000357500 GeneID:51367 KEGG:hsa:51367 UCSC:uc001tys.3
GeneCards:GC12M121016 HGNC:HGNC:17689 HPA:HPA047598 MIM:609992
neXtProt:NX_Q969H6 PharmGKB:PA128394660 InParanoid:Q969H6
GenomeRNAi:51367 NextBio:54841 ArrayExpress:Q969H6 Bgee:Q969H6
CleanEx:HS_POP5 Genevestigator:Q969H6 GermOnline:ENSG00000167272
Uniprot:Q969H6
Length = 163
Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 43/120 (35%), Positives = 65/120 (54%)
Query: 1 MVGFKNRYMVVEVFLD-PNKELPVDDPVILTQFNVSKAIRDSILVNFGECGLAS-SLGSF 58
MV FK+RY++ E+ D P L +DD V+ S +RD+I G G A+ S+G F
Sbjct: 1 MVRFKHRYLLCELVSDDPRCRLSLDDRVL------SSLVRDTIARVHGTFGAAACSIG-F 53
Query: 59 QVKYVNPITKLCIIRASREDCQKVWSAMTMVRSIGN------CLVLFNVLDLSGSIRACK 112
V+Y+N T + ++R +E Q VWSA+ + + N C FN L + G+IR C+
Sbjct: 54 AVRYLNAYTGIVLLRCRKEFYQLVWSALPFITYLENKGHRYPCF--FNTLHVGGTIRTCQ 111
>UNIPROTKB|G1K1B6 [details] [associations]
symbol:POP5 "Ribonuclease P/MRP protein subunit POP5"
species:9913 "Bos taurus" [GO:0008033 "tRNA processing"
evidence=IEA] [GO:0005655 "nucleolar ribonuclease P complex"
evidence=IEA] [GO:0004526 "ribonuclease P activity" evidence=IEA]
InterPro:IPR002759 InterPro:IPR016819 Pfam:PF01900
PIRSF:PIRSF023803 GO:GO:0008033 GO:GO:0005655 GO:GO:0004526
UniGene:Bt.10352 GeneTree:ENSGT00390000012331 OMA:CEVVSDD
EMBL:DAAA02045454 Ensembl:ENSBTAT00000007083 Uniprot:G1K1B6
Length = 170
Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 42/120 (35%), Positives = 66/120 (55%)
Query: 1 MVGFKNRYMVVEVFLD-PNKELPVDDPVILTQFNVSKAIRDSILVNFGECGLAS-SLGSF 58
MV FK+RY++ EV D P L ++D V+ T +RD+I G G A+ S+G F
Sbjct: 1 MVRFKHRYLLCEVVSDDPRCRLTLEDRVLGT------LVRDTIARVHGTFGAAACSIG-F 53
Query: 59 QVKYVNPITKLCIIRASREDCQKVWSAMTMVRSIGN------CLVLFNVLDLSGSIRACK 112
V+Y+N T + ++R +E + VWSA+ + S+ N C + N L + G+IR C+
Sbjct: 54 AVRYLNAYTGIVLLRCRKEFYRLVWSALPFITSLENKGHRYPCFL--NTLHVGGTIRTCQ 111
>UNIPROTKB|Q1JQ92 [details] [associations]
symbol:POP5 "Ribonuclease P/MRP protein subunit POP5"
species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=IEA]
[GO:0004526 "ribonuclease P activity" evidence=IEA] [GO:0008033
"tRNA processing" evidence=IEA] InterPro:IPR002759
InterPro:IPR016819 Pfam:PF01900 PIRSF:PIRSF023803 GO:GO:0005730
GO:GO:0008033 GO:GO:0004526 eggNOG:COG1369 KO:K03537 EMBL:BC116153
IPI:IPI00688426 RefSeq:NP_001068780.1 UniGene:Bt.10352
ProteinModelPortal:Q1JQ92 STRING:Q1JQ92 PRIDE:Q1JQ92 GeneID:507410
KEGG:bta:507410 CTD:51367 HOGENOM:HOG000293345 HOVERGEN:HBG082157
InParanoid:Q1JQ92 OrthoDB:EOG49W2GX NextBio:20868044 Uniprot:Q1JQ92
Length = 170
Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 42/120 (35%), Positives = 66/120 (55%)
Query: 1 MVGFKNRYMVVEVFLD-PNKELPVDDPVILTQFNVSKAIRDSILVNFGECGLAS-SLGSF 58
MV FK+RY++ EV D P L ++D V+ T +RD+I G G A+ S+G F
Sbjct: 1 MVRFKHRYLLCEVVSDDPRCRLTLEDRVLGT------LVRDTIARVHGTFGAAACSIG-F 53
Query: 59 QVKYVNPITKLCIIRASREDCQKVWSAMTMVRSIGN------CLVLFNVLDLSGSIRACK 112
V+Y+N T + ++R +E + VWSA+ + S+ N C + N L + G+IR C+
Sbjct: 54 AVRYLNAYTGIVLLRCRKEFYRLVWSALPFITSLENKGHRYPCFL--NTLHVGGTIRTCQ 111
>RGD|1311819 [details] [associations]
symbol:Pop5 "processing of precursor 5, ribonuclease P/MRP
subunit (S. cerevisiae)" species:10116 "Rattus norvegicus"
[GO:0004526 "ribonuclease P activity" evidence=IEA;ISO] [GO:0005634
"nucleus" evidence=IEA] [GO:0005655 "nucleolar ribonuclease P
complex" evidence=ISO] [GO:0008033 "tRNA processing"
evidence=IEA;ISO] InterPro:IPR002759 InterPro:IPR016819
Pfam:PF01900 PIRSF:PIRSF023803 RGD:1311819 EMBL:CH473973
GO:GO:0008033 GO:GO:0005655 GO:GO:0004526 KO:K03537 CTD:51367
OrthoDB:EOG49W2GX OMA:CEVVSDD IPI:IPI00191052 RefSeq:NP_001099222.2
Ensembl:ENSRNOT00000001591 GeneID:117241 KEGG:rno:117241
UCSC:RGD:1311819 Uniprot:D3ZY31
Length = 169
Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 39/117 (33%), Positives = 60/117 (51%)
Query: 1 MVGFKNRYMVVE-VFLDPNKELPVDDPVILTQFNVSKAIRDSILVNFGECGLASSLGSFQ 59
MV FK+RY++ E V DP L +DD V+ +RD+I G G A+ F
Sbjct: 1 MVRFKHRYLLCELVSEDPRCRLSLDDRVL------GGLVRDTIARVHGAFGAAACSVGFA 54
Query: 60 VKYVNPITKLCIIRASREDCQKVWSAMTMVRSIGN----CLVLFNVLDLSGSIRACK 112
V+Y+N T + ++R ++ Q VWSA+ + + N FN L + G+IR C+
Sbjct: 55 VRYLNAYTGVVLLRCRKDFYQLVWSALPFITCLENKGHRYSCFFNTLHVGGTIRTCQ 111
>UNIPROTKB|F1RJI5 [details] [associations]
symbol:POP5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008033 "tRNA processing" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004526 "ribonuclease P activity"
evidence=IEA] InterPro:IPR002759 InterPro:IPR016819 Pfam:PF01900
PIRSF:PIRSF023803 GO:GO:0005634 GO:GO:0008033 GO:GO:0004526
GeneTree:ENSGT00390000012331 EMBL:CU062553
Ensembl:ENSSSCT00000010862 Uniprot:F1RJI5
Length = 167
Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 41/121 (33%), Positives = 64/121 (52%)
Query: 1 MVGFKNRYMVVEVFL-DPNKELPVDDPVILTQFNVSKAIRDSILVNFGECGLA-SSLG-S 57
MV FK+RY++ EV DP L ++D V+ +RD+I G G A SS+G +
Sbjct: 1 MVRFKHRYLLCEVVSEDPRCRLNLEDRVL------GGLVRDTIARVHGTFGAAASSIGFA 54
Query: 58 FQVKYVNPITKLCIIRASREDCQKVWSAMTMVRSIGN------CLVLFNVLDLSGSIRAC 111
V+Y+N T + ++R +E + VWSA+ + + N C FN L + G+IR C
Sbjct: 55 AAVRYLNAYTGIVLLRCRKEFYRLVWSALPFITYLENKGHRYPCF--FNTLHVGGTIRTC 112
Query: 112 K 112
+
Sbjct: 113 Q 113
>UNIPROTKB|I3LKB0 [details] [associations]
symbol:POP5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008033 "tRNA processing" evidence=IEA] [GO:0005655
"nucleolar ribonuclease P complex" evidence=IEA] [GO:0004526
"ribonuclease P activity" evidence=IEA] InterPro:IPR002759
InterPro:IPR016819 Pfam:PF01900 PIRSF:PIRSF023803 GO:GO:0008033
GO:GO:0005655 GO:GO:0004526 GeneTree:ENSGT00390000012331
OMA:CEVVSDD EMBL:CU062553 Ensembl:ENSSSCT00000023201 Uniprot:I3LKB0
Length = 172
Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 41/121 (33%), Positives = 64/121 (52%)
Query: 1 MVGFKNRYMVVEVFL-DPNKELPVDDPVILTQFNVSKAIRDSILVNFGECGLA-SSLG-S 57
MV FK+RY++ EV DP L ++D V+ +RD+I G G A SS+G +
Sbjct: 1 MVRFKHRYLLCEVVSEDPRCRLNLEDRVL------GGLVRDTIARVHGTFGAAASSIGFA 54
Query: 58 FQVKYVNPITKLCIIRASREDCQKVWSAMTMVRSIGN------CLVLFNVLDLSGSIRAC 111
V+Y+N T + ++R +E + VWSA+ + + N C FN L + G+IR C
Sbjct: 55 AAVRYLNAYTGIVLLRCRKEFYRLVWSALPFITYLENKGHRYPCF--FNTLHVGGTIRTC 112
Query: 112 K 112
+
Sbjct: 113 Q 113
>MGI|MGI:2151221 [details] [associations]
symbol:Pop5 "processing of precursor 5, ribonuclease P/MRP
family (S. cerevisiae)" species:10090 "Mus musculus" [GO:0000171
"ribonuclease MRP activity" evidence=ISA] [GO:0000172 "ribonuclease
MRP complex" evidence=ISA] [GO:0004526 "ribonuclease P activity"
evidence=IDA] [GO:0004540 "ribonuclease activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005655 "nucleolar
ribonuclease P complex" evidence=IDA] [GO:0006364 "rRNA processing"
evidence=ISA] [GO:0008033 "tRNA processing" evidence=IDA]
[GO:0016070 "RNA metabolic process" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR002759
InterPro:IPR016819 Pfam:PF01900 PIRSF:PIRSF023803 MGI:MGI:2151221
GO:GO:0008033 GO:GO:0006364 GO:GO:0005655 GO:GO:0000172
GO:GO:0000171 GO:GO:0004526 KO:K03537 CTD:51367
HOGENOM:HOG000293345 HOVERGEN:HBG082157 OrthoDB:EOG49W2GX
eggNOG:NOG284693 GeneTree:ENSGT00390000012331 OMA:CEVVSDD
EMBL:AK005290 EMBL:AK012523 EMBL:AK013257 EMBL:BC022670
IPI:IPI00756093 RefSeq:NP_080674.1 UniGene:Mm.24636
ProteinModelPortal:Q9DB28 SMR:Q9DB28 STRING:Q9DB28
PhosphoSite:Q9DB28 PRIDE:Q9DB28 Ensembl:ENSMUST00000081497
Ensembl:ENSMUST00000135455 GeneID:117109 KEGG:mmu:117109
UCSC:uc008zdi.1 InParanoid:Q9DB28 ChiTaRS:POP5 NextBio:369498
Bgee:Q9DB28 Genevestigator:Q9DB28 GermOnline:ENSMUSG00000060152
Uniprot:Q9DB28
Length = 169
Score = 133 (51.9 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 39/119 (32%), Positives = 60/119 (50%)
Query: 1 MVGFKNRYMVVE-VFLDPNKELPVDDPVILTQFNVSKAIRDSILVNFGECGLASSLGSFQ 59
MV FK+RY++ E V D L +DD V+ +RD+I G G A+ F
Sbjct: 1 MVRFKHRYLLCELVSEDARCRLSLDDRVL------GGLVRDTIARVHGAFGAAACSVGFA 54
Query: 60 VKYVNPITKLCIIRASREDCQKVWSAMTMVRSIGN------CLVLFNVLDLSGSIRACK 112
V+Y+N T + ++R ++ Q VWSA+ + + N C FN L + G+IR C+
Sbjct: 55 VRYLNAYTGVVLLRCRKDFYQLVWSALPFITYLENKGHRYPCF--FNTLHVGGTIRTCQ 111
>UNIPROTKB|E2RE45 [details] [associations]
symbol:POP5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008033 "tRNA processing" evidence=IEA]
[GO:0005655 "nucleolar ribonuclease P complex" evidence=IEA]
[GO:0004526 "ribonuclease P activity" evidence=IEA]
InterPro:IPR002759 InterPro:IPR016819 Pfam:PF01900
PIRSF:PIRSF023803 GO:GO:0008033 GO:GO:0005655 GO:GO:0004526
KO:K03537 CTD:51367 GeneTree:ENSGT00390000012331 OMA:CEVVSDD
EMBL:AAEX03014737 RefSeq:XP_534710.2 ProteinModelPortal:E2RE45
Ensembl:ENSCAFT00000016506 GeneID:477515 KEGG:cfa:477515
NextBio:20852979 Uniprot:E2RE45
Length = 170
Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 42/123 (34%), Positives = 65/123 (52%)
Query: 1 MVGFKNRYMVVEVFLD-PNKELPVDDPVILTQFNVSKAIRDSILVNFGECGLAS-SLGSF 58
MV FK+RY++ EV D P L ++D + IRD+I G G AS S+G F
Sbjct: 1 MVRFKHRYLLCEVVSDDPRCRLSLEDRAL------GGLIRDTIARVHGTFGAASCSIG-F 53
Query: 59 QVKYVNPITKLCIIRASREDCQKVWSAM---TMVRSIGNCLVLF-NVLDLSGSIRACKNA 114
V+Y+N T + ++R +E Q V SA+ T + + G+ F N L + G+IR C+
Sbjct: 54 AVRYLNAYTGIVLLRCRKEFYQLVCSALPFITYLENKGHRYPCFLNTLHVGGTIRTCQKF 113
Query: 115 ALK 117
++
Sbjct: 114 LIR 116
>UNIPROTKB|E1C5W3 [details] [associations]
symbol:POP5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004526 "ribonuclease P activity" evidence=IEA]
[GO:0005655 "nucleolar ribonuclease P complex" evidence=IEA]
[GO:0008033 "tRNA processing" evidence=IEA] InterPro:IPR002759
InterPro:IPR016819 Pfam:PF01900 PIRSF:PIRSF023803 GO:GO:0008033
GO:GO:0005655 GO:GO:0004526 KO:K03537 CTD:51367
GeneTree:ENSGT00390000012331 OMA:CEVVSDD EMBL:AADN02043208
IPI:IPI00588858 RefSeq:XP_415266.2 UniGene:Gga.53931
Ensembl:ENSGALT00000011539 GeneID:416973 KEGG:gga:416973
NextBio:20820359 Uniprot:E1C5W3
Length = 166
Score = 126 (49.4 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 41/118 (34%), Positives = 60/118 (50%)
Query: 1 MVGFKNRYMVVEVFL-DPNKELPVDDPVILTQFNVSKAIRDSILVNFGECGLASSLGSFQ 59
MV FKNRY++ EV DP ++D V A+RD+I G+ GL SF
Sbjct: 1 MVRFKNRYVLCEVLSEDPRCRQCIEDRA------VGLAVRDAIARAHGDYGLGCCCVSFT 54
Query: 60 VKYVNPITKLCIIRASREDCQKVWS-AMTMVRSI---GNCL-VLFNVLDLSGSIRACK 112
VKY+N T ++R R+D Q++ S A+ +VR + G L + G+IR C+
Sbjct: 55 VKYLNAYTGTVLLRC-RKDFQRLLSSALPLVRHLEGRGQRFPCALRTLHVGGTIRTCQ 111
>SGD|S000000031 [details] [associations]
symbol:POP5 "Subunit of both RNase MRP and nuclear RNase P"
species:4932 "Saccharomyces cerevisiae" [GO:0005655 "nucleolar
ribonuclease P complex" evidence=IDA] [GO:0000171 "ribonuclease MRP
activity" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0004540 "ribonuclease activity" evidence=IEA] [GO:0008033 "tRNA
processing" evidence=IEA;TAS] [GO:0034965 "intronic box C/D snoRNA
processing" evidence=IDA] [GO:0004526 "ribonuclease P activity"
evidence=IEA;IMP] [GO:0006379 "mRNA cleavage" evidence=IPI]
[GO:0000172 "ribonuclease MRP complex" evidence=IDA] [GO:0006364
"rRNA processing" evidence=IEA;TAS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR002759 Pfam:PF01900 SGD:S000000031 GO:GO:0005737
EMBL:BK006935 EMBL:U12980 GO:GO:0008033 GO:GO:0006364 GO:GO:0006379
EMBL:X62577 GO:GO:0005655 GO:GO:0000172 GO:GO:0000171 GO:GO:0004526
GO:GO:0034965 eggNOG:COG1369 KO:K03537 HOGENOM:HOG000216538
OrthoDB:EOG4M9522 PIR:S23411 RefSeq:NP_009369.1
ProteinModelPortal:P28005 SMR:P28005 DIP:DIP-3789N IntAct:P28005
MINT:MINT-573609 STRING:P28005 PaxDb:P28005 PeptideAtlas:P28005
EnsemblFungi:YAL033W GeneID:851200 KEGG:sce:YAL033W CYGD:YAL033w
OMA:YFSNKTS NextBio:968055 Genevestigator:P28005 GermOnline:YAL033W
Uniprot:P28005
Length = 173
Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 40/132 (30%), Positives = 65/132 (49%)
Query: 1 MVGFKNRYMVVEVFLDP---NKELPVDDP-VILTQFNVSKA----------IRDSILVNF 46
MV K+RY++ E+ P N E V ++L+ S A IR S+ +N
Sbjct: 1 MVRLKSRYILFEIIFPPTDTNVEESVSKADILLSHHRASPADVSIKSILQEIRRSLSLNL 60
Query: 47 GECGLASSLGSFQVKYVNPITKLCIIRASREDCQKVWSAMTMVRSIGNCL-VLFNVLDLS 105
G+ G A Q+KY + T IIR REDC V A+ ++ IG+ ++ N + +S
Sbjct: 61 GDYGSAKCNSLLQLKYFSNKTSTGIIRCHREDCDLVIMALMLMSKIGDVDGLIVNPVKVS 120
Query: 106 GSIRACKNAALK 117
G+I+ + A++
Sbjct: 121 GTIKKIEQFAMR 132
>FB|FBgn0036696 [details] [associations]
symbol:CG14057 species:7227 "Drosophila melanogaster"
[GO:0004526 "ribonuclease P activity" evidence=IEA] [GO:0008033
"tRNA processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0022008 "neurogenesis" evidence=IMP] [GO:0046331 "lateral
inhibition" evidence=IMP] InterPro:IPR002759 InterPro:IPR016819
Pfam:PF01900 PIRSF:PIRSF023803 GO:GO:0005634 EMBL:AE014296
GO:GO:0022008 GO:GO:0008033 GO:GO:0046331 GO:GO:0004526 KO:K03537
GeneTree:ENSGT00390000012331 OMA:CEVVSDD UniGene:Dm.24015
GeneID:39915 KEGG:dme:Dmel_CG14057 FlyBase:FBgn0036696
GenomeRNAi:39915 NextBio:816061 RefSeq:NP_648955.1
ProteinModelPortal:Q9VVE0 SMR:Q9VVE0 STRING:Q9VVE0 PRIDE:Q9VVE0
EnsemblMetazoa:FBtr0075286 UCSC:CG14057-RA InParanoid:Q9VVE0
OrthoDB:EOG4QRFMN PhylomeDB:Q9VVE0 Bgee:Q9VVE0 Uniprot:Q9VVE0
Length = 145
Score = 121 (47.7 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 34/118 (28%), Positives = 58/118 (49%)
Query: 1 MVGFKNRYMVVEVF-LDPNKELPVDDPVILTQFNVSKAIRDSILVNFGECGLASSLGSFQ 59
MV KNRY+ V++ P + L ++D +++K + ++ +G GLA F+
Sbjct: 1 MVRIKNRYIAVQIVPYTPTQSLRLND------HSLTKILLQNVEKYYGVYGLAVIEQGFR 54
Query: 60 VKYVNPITKLCIIRASREDCQKVWSAMTMVRSIGNCLVLFNVLDLSGSIRACKNAALK 117
VKY+N TK+ IIR + V S + ++ IG+ F L + +I C +K
Sbjct: 55 VKYINDRTKMAIIRCLHRGQRFVSSVLPLITLIGDVRAKFRTLYIGATIIQCNKFIVK 112
>CGD|CAL0004064 [details] [associations]
symbol:orf19.275 species:5476 "Candida albicans" [GO:0000172
"ribonuclease MRP complex" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005655 "nucleolar ribonuclease P
complex" evidence=IEA] [GO:0034965 "intronic box C/D snoRNA
processing" evidence=IEA] [GO:0006379 "mRNA cleavage" evidence=IEA]
[GO:0000171 "ribonuclease MRP activity" evidence=IEA] [GO:0004526
"ribonuclease P activity" evidence=IEA] InterPro:IPR002759
Pfam:PF01900 CGD:CAL0004064 GO:GO:0008033 GO:GO:0004540
EMBL:AACQ01000027 EMBL:AACQ01000026 eggNOG:COG1369 KO:K03537
RefSeq:XP_719973.1 RefSeq:XP_720105.1 ProteinModelPortal:Q5AEJ3
STRING:Q5AEJ3 GeneID:3638269 GeneID:3638331 KEGG:cal:CaO19.275
KEGG:cal:CaO19.7907 Uniprot:Q5AEJ3
Length = 190
Score = 98 (39.6 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 21/84 (25%), Positives = 43/84 (51%)
Query: 34 VSKAIRDSILVNFGECGLASSLGSFQVKYVNPITKLCIIRASREDCQKVWSAMTMVRSIG 93
+ IR S+ ++G+ G + VKY + T I+R R+ + AM+++ +
Sbjct: 56 ILNVIRKSLSDHYGDVGAGKAGMLLNVKYFSNRTSTGILRCGRDQSDYIIGAMSLIEKME 115
Query: 94 NCLVLFNVLDLSGSIRACKNAALK 117
N V+ L +SG+I+ C+ +++
Sbjct: 116 NNYVIIRCLHVSGTIKKCEEYSIE 139
Score = 48 (22.0 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 1 MVGFKNRYMVVEVFLDPNKELPVDDPVILTQFNVSKA 37
MV K+RY++ E+ P + V QF+ S++
Sbjct: 1 MVRIKHRYILFEILYPPTADTRVTPREDFNQFSQSES 37
>ZFIN|ZDB-GENE-050320-123 [details] [associations]
symbol:pop5 "processing of precursor 5,
ribonuclease P/MRP subunit (S. cerevisiae)" species:7955 "Danio
rerio" [GO:0004526 "ribonuclease P activity" evidence=IEA]
[GO:0008033 "tRNA processing" evidence=IEA] [GO:0004540
"ribonuclease activity" evidence=IEA] [GO:0016070 "RNA metabolic
process" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR002759 InterPro:IPR016819
Pfam:PF01900 PIRSF:PIRSF023803 ZFIN:ZDB-GENE-050320-123
GO:GO:0005730 GO:GO:0008033 GO:GO:0004526 KO:K03537 CTD:51367
HOGENOM:HOG000293345 HOVERGEN:HBG082157 OrthoDB:EOG49W2GX
EMBL:BC091467 IPI:IPI00555358 RefSeq:NP_001013566.1
UniGene:Dr.39115 STRING:Q5BJI6 Ensembl:ENSDART00000075491
GeneID:541421 KEGG:dre:541421 eggNOG:NOG284693
GeneTree:ENSGT00390000012331 InParanoid:Q5BJI6 OMA:CEVVSDD
NextBio:20879231 ArrayExpress:Q5BJI6 Bgee:Q5BJI6 Uniprot:Q5BJI6
Length = 169
Score = 100 (40.3 bits), Expect = 0.00033, P = 0.00033
Identities = 40/161 (24%), Positives = 77/161 (47%)
Query: 1 MVGFKNRYMVVEVFLDPNKELPVDDPVILTQFNVSKAIRDSILVNFGECGLAS---SLGS 57
MV FK+RY++ E+ + L + + ++ Q A+R ++ G+ G A +LG
Sbjct: 1 MVRFKSRYLLCELCVSEPSSLHLFEDKVVYQ-----ALRGAVNRAHGDYGAAIFNITLGV 55
Query: 58 FQVKYVNPITKLCIIRASREDCQKVWSAMTMVRSIGN----CLVLFNVLDLSGSIRACKN 113
VKY+N T + +IR + + VWS++ + + N FN + + G+IR +
Sbjct: 56 L-VKYLNAHTGVVLIRCRKAHYRLVWSSLPFITFLENRGQKVRCFFNCIHVGGTIRTSQK 114
Query: 114 AALKCEEVKFEHYKLAVGARLSA---DVTQHMENC-LEKIK 150
+K + + ++ + + A DV + + +C L IK
Sbjct: 115 FLIKYNRQQLQ--RMLLDCKTDAEKQDVRKAILSCSLNLIK 153
>ASPGD|ASPL0000046823 [details] [associations]
symbol:AN2437 species:162425 "Emericella nidulans"
[GO:0034965 "intronic box C/D snoRNA processing" evidence=IEA]
[GO:0006379 "mRNA cleavage" evidence=IEA] [GO:0008033 "tRNA
processing" evidence=IEA] [GO:0000172 "ribonuclease MRP complex"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005655 "nucleolar ribonuclease P complex" evidence=IEA]
[GO:0000171 "ribonuclease MRP activity" evidence=IEA] [GO:0004526
"ribonuclease P activity" evidence=IEA] InterPro:IPR002759
Pfam:PF01900 EMBL:BN001307 GO:GO:0008033 GO:GO:0004540
EMBL:AACD01000040 eggNOG:COG1369 KO:K03537 HOGENOM:HOG000216538
OrthoDB:EOG4M9522 OMA:YFSNKTS RefSeq:XP_660041.1
ProteinModelPortal:Q5BAJ3 EnsemblFungi:CADANIAT00009149
GeneID:2874665 KEGG:ani:AN2437.2 Uniprot:Q5BAJ3
Length = 214
Score = 102 (41.0 bits), Expect = 0.00039, P = 0.00039
Identities = 30/98 (30%), Positives = 44/98 (44%)
Query: 22 PVDDPVILTQFNVSKAIRDSILVNFGECGLAS----SLGSFQVKYVNPITKLCIIRASRE 77
P D LT ++K +RD + FG+ G+ G VKY++P T IIR R
Sbjct: 44 PTSDA--LTPSLLAKMVRDEVAKMFGDWGIGRLGGVGAGGVSVKYLSPATSTAIIRCPRA 101
Query: 78 DCQKVWSAMTMVRSI----GNCLVLFNVLDLSGSIRAC 111
+ VW+A+T + + G LDL+ R C
Sbjct: 102 SYRLVWTALTYISHVPDLSGTNGAKSKRLDLANLSRPC 139
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.137 0.406 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 154 154 0.00088 105 3 11 22 0.43 31
30 0.41 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 17
No. of states in DFA: 587 (62 KB)
Total size of DFA: 147 KB (2089 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 13.84u 0.19s 14.03t Elapsed: 00:00:01
Total cpu time: 13.84u 0.19s 14.03t Elapsed: 00:00:01
Start: Thu May 9 21:20:21 2013 End: Thu May 9 21:20:22 2013