Query 031721
Match_columns 154
No_of_seqs 157 out of 1360
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 06:36:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031721.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031721hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2y78_A Peptidyl-prolyl CIS-tra 99.9 4.1E-26 1.4E-30 159.5 13.3 103 50-152 20-122 (133)
2 1yat_A FK506 binding protein; 99.9 5.3E-26 1.8E-30 154.5 12.6 99 54-152 2-101 (113)
3 2lgo_A FKBP; infectious diseas 99.9 5.2E-26 1.8E-30 158.4 11.6 103 50-152 14-119 (130)
4 3kz7_A FK506-binding protein 3 99.9 2.6E-25 9.1E-30 152.3 12.7 98 56-153 2-108 (119)
5 3o5e_A Peptidyl-prolyl CIS-tra 99.9 2.2E-25 7.5E-30 157.7 12.1 99 55-153 32-131 (144)
6 3o5q_A Peptidyl-prolyl CIS-tra 99.9 1.5E-25 5.1E-30 155.6 10.8 100 54-153 15-115 (128)
7 2lkn_A AH receptor-interacting 99.9 3.4E-26 1.2E-30 164.7 7.3 87 54-140 6-96 (165)
8 2ppn_A FK506-binding protein 1 99.9 2.1E-25 7.1E-30 150.1 10.7 94 59-152 1-95 (107)
9 1r9h_A FKB-6, FK506 binding pr 99.9 4E-25 1.4E-29 154.8 10.5 97 56-152 12-109 (135)
10 3uf8_A Ubiquitin-like protein 99.9 8.2E-25 2.8E-29 163.5 12.5 102 51-152 97-198 (209)
11 1jvw_A Macrophage infectivity 99.9 3.7E-25 1.3E-29 160.0 10.2 101 50-152 29-130 (167)
12 4dip_A Peptidyl-prolyl CIS-tra 99.9 1.4E-24 4.9E-29 149.9 11.8 101 51-152 5-110 (125)
13 1u79_A FKBP-type peptidyl-prol 99.9 3E-25 1E-29 154.2 8.3 103 50-152 4-117 (129)
14 3oe2_A Peptidyl-prolyl CIS-tra 99.9 1.8E-24 6.1E-29 162.2 12.6 99 50-153 109-207 (219)
15 3b7x_A FK506-binding protein 6 99.9 2.5E-25 8.5E-30 155.6 7.3 102 51-152 19-121 (134)
16 1fd9_A Protein (macrophage inf 99.9 1.4E-24 4.9E-29 162.4 11.7 101 50-152 98-198 (213)
17 2f4e_A ATFKBP42; FKBP-like, al 99.9 3.4E-24 1.1E-28 156.8 12.9 101 52-152 43-147 (180)
18 2vn1_A 70 kDa peptidylprolyl i 99.9 6.1E-24 2.1E-28 147.5 11.2 100 53-152 10-114 (129)
19 2jwx_A FKBP38NTD, FK506-bindin 99.9 1.1E-23 3.8E-28 150.8 12.0 95 54-152 38-136 (157)
20 1q6h_A FKBP-type peptidyl-prol 99.9 1.2E-23 4E-28 158.5 12.5 99 51-152 114-212 (224)
21 2awg_A 38 kDa FK-506 binding p 99.9 2E-23 6.7E-28 142.9 12.0 95 54-152 8-105 (118)
22 1q1c_A FK506-binding protein 4 99.9 1.5E-22 5.3E-27 157.2 12.9 97 56-152 49-146 (280)
23 2d9f_A FK506-binding protein 8 99.9 8.7E-23 3E-27 142.8 8.6 96 53-152 11-110 (135)
24 2pbc_A FK506-binding protein 2 99.9 6.6E-22 2.3E-26 131.8 9.8 83 70-152 3-85 (102)
25 1kt0_A FKBP51, 51 kDa FK506-bi 99.9 2.7E-22 9.2E-27 164.3 8.6 98 55-152 28-126 (457)
26 2if4_A ATFKBP42; FKBP-like, al 99.9 1.1E-21 3.6E-26 155.0 9.9 102 51-152 42-147 (338)
27 3jxv_A 70 kDa peptidyl-prolyl 99.8 1.1E-22 3.8E-27 162.7 0.0 100 53-152 6-106 (356)
28 3jxv_A 70 kDa peptidyl-prolyl 99.8 9.7E-20 3.3E-24 145.6 11.7 99 54-152 240-342 (356)
29 4dt4_A FKBP-type 16 kDa peptid 99.8 5E-19 1.7E-23 127.8 7.5 72 72-143 24-95 (169)
30 3pr9_A FKBP-type peptidyl-prol 99.8 6.4E-19 2.2E-23 126.0 7.1 70 73-143 2-84 (157)
31 1ix5_A FKBP; ppiase, isomerase 99.7 2.1E-18 7.3E-23 122.6 6.5 71 73-143 2-85 (151)
32 1q1c_A FK506-binding protein 4 99.7 1.1E-17 3.8E-22 129.8 11.0 91 56-152 166-261 (280)
33 2kr7_A FKBP-type peptidyl-prol 99.7 1.4E-17 4.7E-22 118.4 10.1 72 71-143 5-77 (151)
34 3prb_A FKBP-type peptidyl-prol 99.7 8.8E-18 3E-22 126.7 7.7 70 73-143 2-84 (231)
35 2k8i_A SLYD, peptidyl-prolyl C 99.7 2.6E-17 9.1E-22 119.1 9.6 70 73-143 3-72 (171)
36 2kfw_A FKBP-type peptidyl-prol 99.7 2.6E-17 8.9E-22 121.5 9.7 71 72-143 2-72 (196)
37 1hxv_A Trigger factor; FKBP fo 99.7 1.3E-17 4.5E-22 113.1 6.7 73 69-144 26-98 (113)
38 3cgm_A SLYD, peptidyl-prolyl C 99.6 3E-16 1E-20 112.3 7.3 65 73-143 3-67 (158)
39 1p5q_A FKBP52, FK506-binding p 99.6 3.3E-15 1.1E-19 117.6 11.8 93 53-151 20-117 (336)
40 1w26_A Trigger factor, TF; cha 99.4 2.3E-13 7.8E-18 111.3 8.1 74 70-146 155-228 (432)
41 1t11_A Trigger factor, TF; hel 99.3 1.9E-12 6.6E-17 104.6 4.4 74 70-146 158-231 (392)
42 1kt0_A FKBP51, 51 kDa FK506-bi 99.3 2.6E-11 9.1E-16 99.0 10.6 90 56-151 144-238 (457)
43 3gty_X Trigger factor, TF; cha 98.0 5.1E-06 1.8E-10 67.8 5.1 58 72-135 154-211 (433)
44 3cg8_A Laccase; oxidoreductase 80.5 0.35 1.2E-05 37.8 0.2 15 73-87 81-95 (343)
45 2pq4_B Periplasmic nitrate red 60.5 7.5 0.00026 19.9 2.4 17 1-18 1-17 (35)
46 3htx_A HEN1; HEN1, small RNA m 56.2 18 0.00062 32.2 5.5 61 73-133 561-649 (950)
47 3ucp_A UNDA; beta-barrel, C-ty 56.1 9.6 0.00033 32.1 3.8 18 78-95 67-84 (874)
48 2voz_A FUTA2, periplasmic iron 54.0 2.7 9.2E-05 31.7 0.0 24 1-24 1-25 (346)
49 2p4v_A Transcription elongatio 47.7 26 0.0009 24.0 4.3 26 111-136 119-144 (158)
50 2f23_A Anti-cleavage anti-GREA 46.6 22 0.00076 24.3 3.8 24 112-135 121-144 (156)
51 2vda_B Maltoporin; sugar trans 44.3 2.3 8E-05 20.1 -1.1 22 1-22 2-23 (28)
52 3tb5_A Methionine aminopeptida 43.3 75 0.0025 23.1 6.6 52 70-128 82-142 (264)
53 2lkt_A Retinoic acid receptor 39.9 32 0.0011 22.3 3.6 24 71-94 6-35 (125)
54 4gd5_A Phosphate ABC transport 39.3 6.2 0.00021 29.2 -0.0 14 2-15 2-15 (279)
55 4edp_A ABC transporter, substr 36.0 7.6 0.00026 28.9 0.0 23 3-25 3-26 (351)
56 2lj4_A Peptidyl-prolyl CIS-tra 34.5 22 0.00075 22.9 2.1 22 109-130 79-100 (115)
57 1xgs_A Methionine aminopeptida 33.9 97 0.0033 23.2 6.0 51 71-128 71-127 (295)
58 3c75_A Amicyanin; copper prote 33.8 8.7 0.0003 25.4 0.0 10 73-82 64-73 (132)
59 3tlk_A Ferrienterobactin-bindi 33.5 11 0.00038 28.5 0.5 23 4-26 1-23 (326)
60 3mx6_A Methionine aminopeptida 32.9 1.4E+02 0.0047 21.6 6.6 52 70-128 86-146 (262)
61 2p5d_A UPF0310 protein mjecl36 31.7 28 0.00096 23.6 2.3 27 114-142 29-55 (147)
62 4fuk_A Methionine aminopeptida 31.1 1.5E+02 0.0051 22.6 6.7 52 70-128 141-201 (337)
63 1q90_R Cytochrome B6-F complex 29.0 43 0.0015 18.4 2.4 15 3-17 8-22 (49)
64 3pka_A Methionine aminopeptida 28.4 1.8E+02 0.006 21.5 6.6 52 70-128 119-179 (285)
65 2nw5_A Methionine aminopeptida 28.2 1.2E+02 0.004 23.6 5.7 51 71-128 121-177 (360)
66 3fm3_A Methionine aminopeptida 28.2 1.2E+02 0.0039 23.6 5.6 48 72-126 120-173 (358)
67 3omb_A Extracellular solute-bi 28.1 16 0.00055 29.4 0.7 11 1-11 2-12 (535)
68 3bmb_A Regulator of nucleoside 28.1 45 0.0015 22.1 2.9 25 112-136 90-114 (136)
69 2b3h_A Methionine aminopeptida 27.2 1.8E+02 0.0062 22.1 6.6 52 70-128 153-213 (329)
70 2rqs_A Parvulin-like peptidyl- 26.8 44 0.0015 20.5 2.5 23 108-130 60-82 (97)
71 1qxy_A Methionyl aminopeptidas 26.7 1.8E+02 0.006 20.8 6.8 52 70-128 81-142 (252)
72 3tav_A Methionine aminopeptida 26.5 1.9E+02 0.0066 21.2 6.5 51 70-127 113-172 (286)
73 3uor_A ABC transporter sugar b 24.9 15 0.00052 28.9 0.0 24 4-27 2-25 (458)
74 2pv1_A Chaperone SURA; surviVa 24.4 67 0.0023 19.8 3.0 22 109-130 65-86 (103)
75 2hd9_A UPF0310 protein PH1033; 23.7 31 0.0011 23.3 1.4 20 117-136 29-48 (145)
76 3gpk_A PPIC-type peptidyl-prol 23.4 53 0.0018 21.0 2.4 23 108-130 65-87 (112)
77 1o0x_A Methionine aminopeptida 23.4 2.1E+02 0.0073 20.6 6.7 52 70-128 94-155 (262)
78 2pn0_A Prokaryotic transcripti 23.3 44 0.0015 22.3 2.1 25 112-136 93-117 (141)
79 3qsl_A Putative exported prote 23.2 24 0.00081 26.1 0.8 10 58-67 62-71 (346)
80 4g2p_A Chaperone SURA; structu 23.1 41 0.0014 21.3 1.8 21 109-129 70-90 (110)
81 3pmq_A Decaheme cytochrome C M 23.0 19 0.00064 30.9 0.1 24 1-24 1-24 (669)
82 3s6b_A Methionine aminopeptida 21.9 1.9E+02 0.0066 22.6 5.8 52 70-128 181-244 (368)
83 2vqe_L 30S ribosomal protein S 21.8 1.5E+02 0.0052 19.8 4.4 29 54-82 58-86 (135)
84 2q8k_A Proliferation-associate 21.0 1.1E+02 0.0037 24.1 4.3 51 71-128 105-169 (401)
85 3vis_A Esterase; alpha/beta-hy 20.9 26 0.00088 25.8 0.5 38 103-141 99-136 (306)
86 2gg2_A Methionine aminopeptida 20.8 2.4E+02 0.0082 20.2 6.0 50 71-127 85-143 (263)
87 1jns_A Peptidyl-prolyl CIS-tra 20.4 54 0.0019 19.8 1.9 22 109-130 54-75 (92)
88 3ui4_A Peptidyl-prolyl CIS-tra 20.1 55 0.0019 20.3 2.0 21 109-129 57-77 (101)
89 2jzv_A Foldase protein PRSA; p 20.0 53 0.0018 20.6 1.9 21 109-129 75-95 (111)
No 1
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Probab=99.94 E-value=4.1e-26 Score=159.48 Aligned_cols=103 Identities=38% Similarity=0.610 Sum_probs=97.1
Q ss_pred CCCceecCCceEEEEEecCCCCCCCCCCEEEEEEEEEeCCCcEEEccCCCCccEEEEeCCCccchHHHHHhcCCCcccEE
Q 031721 50 NVPMVTTESGLQYKDIKVGQGPSPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGKR 129 (154)
Q Consensus 50 ~~~~~~~~~g~~~~~~~~G~G~~~~~gd~V~v~y~~~~~~g~~~dss~~~~~p~~f~lG~~~~i~g~~~al~~mk~Ge~~ 129 (154)
..+..++++|++|+++++|+|..++.||.|+|||++++.||++||+++++++|+.|.+|.+++++||+++|.+|++|+++
T Consensus 20 ~~~~~~~~~gl~~~~l~~G~G~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~eeaL~gmk~Ge~~ 99 (133)
T 2y78_A 20 HMTVVTTESGLKYEDLTEGSGAEARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVR 99 (133)
T ss_dssp TTCCEECTTSCEEEEEECCSSCBCCTTSEEEEEEEEEETTSCEEEETTTTTCCEEEETTSSSSCHHHHHHSTTCBTTCEE
T ss_pred CCCcEECCCCEEEEEEEcCCCCCCCCCCEEEEEEEEEECCCCEEeccCcCCCCEEEEeCCCChhHHHHHHHcCCCCCCEE
Confidence 35568899999999999999999999999999999999899999999887789999999999999999999999999999
Q ss_pred EEEEcCCCCCCCCCCCCCCCCCC
Q 031721 130 RLYIPGPVISNTLLILHNWEEKT 152 (154)
Q Consensus 130 ~i~ip~~~~yg~~~~~~~~~~~~ 152 (154)
+|+||++++||+.+..+.|+||.
T Consensus 100 ~v~ip~~~aYG~~~~~~~Ipp~~ 122 (133)
T 2y78_A 100 RLTIPPQLGYGARGAGGVIPPNA 122 (133)
T ss_dssp EEEECGGGTTTTTCBTTTBCTTC
T ss_pred EEEECcHHhCCCCCCCCCCCCCC
Confidence 99999999999999888899985
No 2
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1
Probab=99.94 E-value=5.3e-26 Score=154.53 Aligned_cols=99 Identities=33% Similarity=0.558 Sum_probs=93.3
Q ss_pred eecCCceEEEEEecCCCCC-CCCCCEEEEEEEEEeCCCcEEEccCCCCccEEEEeCCCccchHHHHHhcCCCcccEEEEE
Q 031721 54 VTTESGLQYKDIKVGQGPS-PPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGKRRLY 132 (154)
Q Consensus 54 ~~~~~g~~~~~~~~G~G~~-~~~gd~V~v~y~~~~~~g~~~dss~~~~~p~~f~lG~~~~i~g~~~al~~mk~Ge~~~i~ 132 (154)
..+++|++|+++++|+|.. ++.||.|++||++++.||++||+++++++|+.|.+|.+++++||+++|.+|++|++++|.
T Consensus 2 ~~~~~g~~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g~e~~l~gm~~Ge~~~v~ 81 (113)
T 1yat_A 2 EVIEGNVKIDRISPGDGATFPKTGDLVTIHYTGTLENGQKFDSSVDRGSPFQCNIGVGQVIKGWDVGIPKLSVGEKARLT 81 (113)
T ss_dssp EECGGGCEEEEEECCCSSCCCCTTCEEEEEEEEEETTSCEEEESTTTTCCEEEETTSSSSCHHHHHHGGGCCTTCEEEEE
T ss_pred CCCCCCeEEEEEECCCCcccCCCCCEEEEEEEEEECCCCEEEecCCCCCcEEEEeCCCCccHHHHHHHhCCCCCCEEEEE
Confidence 4678999999999999998 999999999999999899999999877789999999999999999999999999999999
Q ss_pred EcCCCCCCCCCCCCCCCCCC
Q 031721 133 IPGPVISNTLLILHNWEEKT 152 (154)
Q Consensus 133 ip~~~~yg~~~~~~~~~~~~ 152 (154)
||++++||+.+..+.|+||.
T Consensus 82 ip~~~ayG~~~~~~~Ip~~~ 101 (113)
T 1yat_A 82 IPGPYAYGPRGFPGLIPPNS 101 (113)
T ss_dssp ECGGGTTTTTCBTTTBCTTC
T ss_pred ECHHHCcCCCCCCCCcCCCC
Confidence 99999999998877888885
No 3
>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}
Probab=99.93 E-value=5.2e-26 Score=158.37 Aligned_cols=103 Identities=29% Similarity=0.462 Sum_probs=96.6
Q ss_pred CCCceecCCceEEE--EEecCCCCC-CCCCCEEEEEEEEEeCCCcEEEccCCCCccEEEEeCCCccchHHHHHhcCCCcc
Q 031721 50 NVPMVTTESGLQYK--DIKVGQGPS-PPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTG 126 (154)
Q Consensus 50 ~~~~~~~~~g~~~~--~~~~G~G~~-~~~gd~V~v~y~~~~~~g~~~dss~~~~~p~~f~lG~~~~i~g~~~al~~mk~G 126 (154)
+..+..+++|++|+ ++++|+|.. ++.||.|+|||++++.||++||+++++++|+.|.+|.+++++||+++|.+|++|
T Consensus 14 ~~~~~~~~~Gl~~~K~~l~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~e~aL~gm~~G 93 (130)
T 2lgo_A 14 AQTQGPGSMSAQLEKKVLTPGDGVTKPQAGKKVTVHYDGRFPDGKQFDSSRSRGKPFQFTLGAGEVIKGWDQGVATMTLG 93 (130)
T ss_dssp CSSCSSSSSSCCCCEEEEECCCSSCCCCTTSEEEEEEEEECTTSCEEECTTTTTCCEEEETTSTTSCHHHHHHHHHSCTT
T ss_pred cccceeCCCceEEEEEEEeccCCCccCCCCCEEEEEEEEEECCCCEEEccCcCCCCEEEEeCCCCccHHHHHHHhCCCCC
Confidence 56667889999999 999999998 999999999999998899999999887789999999999999999999999999
Q ss_pred cEEEEEEcCCCCCCCCCCCCCCCCCC
Q 031721 127 GKRRLYIPGPVISNTLLILHNWEEKT 152 (154)
Q Consensus 127 e~~~i~ip~~~~yg~~~~~~~~~~~~ 152 (154)
++++|.||++++||+.+..+.|+||.
T Consensus 94 e~~~v~ip~~~aYG~~~~~~~Ip~~~ 119 (130)
T 2lgo_A 94 EKALFTIPYQLAYGERGYPPVIPPKA 119 (130)
T ss_dssp EEEEEEECTTTSTTTTCCSTTSCSSC
T ss_pred CEEEEEECcHHHCCCCCCCCCcCCCC
Confidence 99999999999999998877898885
No 4
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*
Probab=99.93 E-value=2.6e-25 Score=152.28 Aligned_cols=98 Identities=29% Similarity=0.439 Sum_probs=89.9
Q ss_pred cCCceEEEEEecCCCCC-CCCCCEEEEEEEEEeCCCcEEEccCCC-------CccEEEEeCCCccchHHHHHhcCCCccc
Q 031721 56 TESGLQYKDIKVGQGPS-PPVGFQVAANYVAMIPSGQIFDSSLEK-------GRPYIFRVGSGQVVKGLDEGILTMKTGG 127 (154)
Q Consensus 56 ~~~g~~~~~~~~G~G~~-~~~gd~V~v~y~~~~~~g~~~dss~~~-------~~p~~f~lG~~~~i~g~~~al~~mk~Ge 127 (154)
.|+|++|+++++|+|.. |+.||.|+|||++++.||++||+++.. +.|+.|.+|.+++++||+++|.+|++|+
T Consensus 2 ~p~g~~~~il~~G~g~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~~Ge 81 (119)
T 3kz7_A 2 GPPKYTKSILKKGDKTNFPKKGDVVHCWYTGTLPDGTVFDTNIQTSSKKKKNAKPLSFKVGVGKVIRGWDEALLTMSKGE 81 (119)
T ss_dssp CSCSEEEEEEECCCSSCCCCTTCEEEEEEEEECTTSCEEEECCCCSSSTTTTCCCEEEETTSSSSCHHHHHHHTTCCTTC
T ss_pred CCCccEEEEEEcCCCCCcCCCCCEEEEEEEEEECCCCEEEeccccccccccCCCCEEEEECCCChhHHHHHHHhCCCCCC
Confidence 58999999999999965 999999999999999999999999763 4799999999999999999999999999
Q ss_pred EEEEEEcCCCCCCCCCCCC-CCCCCCC
Q 031721 128 KRRLYIPGPVISNTLLILH-NWEEKTC 153 (154)
Q Consensus 128 ~~~i~ip~~~~yg~~~~~~-~~~~~~~ 153 (154)
+++|+||++++||+.+..+ .|.||..
T Consensus 82 ~~~v~ip~~~aYG~~g~~~~~Ip~~~~ 108 (119)
T 3kz7_A 82 KARLEIEPEWAYGKKGQPDAKIPPNTK 108 (119)
T ss_dssp EEEEEECGGGTTCTTCBGGGTBCTTCC
T ss_pred EEEEEECcHHhcCCCCCCCCccCcCCe
Confidence 9999999999999988654 7888853
No 5
>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A
Probab=99.93 E-value=2.2e-25 Score=157.68 Aligned_cols=99 Identities=28% Similarity=0.464 Sum_probs=93.4
Q ss_pred ecCCceEEEEEecCCCC-CCCCCCEEEEEEEEEeCCCcEEEccCCCCccEEEEeCCCccchHHHHHhcCCCcccEEEEEE
Q 031721 55 TTESGLQYKDIKVGQGP-SPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGKRRLYI 133 (154)
Q Consensus 55 ~~~~g~~~~~~~~G~G~-~~~~gd~V~v~y~~~~~~g~~~dss~~~~~p~~f~lG~~~~i~g~~~al~~mk~Ge~~~i~i 133 (154)
..++|++|+++++|+|. .|+.||.|.|||++++.||++||+++.+++|+.|.+|.+++|+||+++|.+|++|++++|+|
T Consensus 32 ~~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~~i~G~e~~l~gm~~Ge~~~v~i 111 (144)
T 3o5e_A 32 KKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLC 111 (144)
T ss_dssp SCSSSEEEEEEECCBSSCCCCTTCEEEEEEEEECTTSCEEEESGGGTSCEEEETTSSSSCHHHHHHHTTCCBTCEEEEEE
T ss_pred cCCCeEEEEEEECCCCCccCCCCCEEEEEEEEEECCCCEEEeecccCCCeEEEeCCCcccHHHHHHHhCCCCCCEEEEEE
Confidence 46899999999999997 59999999999999999999999998888899999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCCCCC
Q 031721 134 PGPVISNTLLILHNWEEKTC 153 (154)
Q Consensus 134 p~~~~yg~~~~~~~~~~~~~ 153 (154)
||+++||+.+..+.|+||..
T Consensus 112 pp~~aYG~~g~~~~Ipp~~~ 131 (144)
T 3o5e_A 112 KPEYAYGSAGSLPKIPSNAT 131 (144)
T ss_dssp CGGGTTTTTCBTTTBCTTCC
T ss_pred ChHHCcCCCCCCCCcCCCCe
Confidence 99999999998889999863
No 6
>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A
Probab=99.93 E-value=1.5e-25 Score=155.59 Aligned_cols=100 Identities=28% Similarity=0.456 Sum_probs=93.5
Q ss_pred eecCCceEEEEEecCCCC-CCCCCCEEEEEEEEEeCCCcEEEccCCCCccEEEEeCCCccchHHHHHhcCCCcccEEEEE
Q 031721 54 VTTESGLQYKDIKVGQGP-SPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGKRRLY 132 (154)
Q Consensus 54 ~~~~~g~~~~~~~~G~G~-~~~~gd~V~v~y~~~~~~g~~~dss~~~~~p~~f~lG~~~~i~g~~~al~~mk~Ge~~~i~ 132 (154)
...++|++|+++++|+|. .|+.||.|.|||++++.||++||+++.+++|+.|.+|.+++++||+++|.+|++|++++|+
T Consensus 15 ~~~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~~i~G~e~~l~gm~~Ge~~~v~ 94 (128)
T 3o5q_A 15 SKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLL 94 (128)
T ss_dssp SSCSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHTTCCTTCEEEEE
T ss_pred ccCCCCEEEEEEECCCCCccCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEECCCCccHHHHHHHhcCCCCCEEEEE
Confidence 357889999999999997 5899999999999999999999999877789999999999999999999999999999999
Q ss_pred EcCCCCCCCCCCCCCCCCCCC
Q 031721 133 IPGPVISNTLLILHNWEEKTC 153 (154)
Q Consensus 133 ip~~~~yg~~~~~~~~~~~~~ 153 (154)
||++++||+.+..+.|+||..
T Consensus 95 ip~~~aYG~~g~~~~Ip~~~~ 115 (128)
T 3o5q_A 95 CKPEYAYGSAGSLPKIPSNAT 115 (128)
T ss_dssp ECGGGTTTTTCBTTTBCTTCC
T ss_pred EChHHcCCCCCCCCCcCCCCE
Confidence 999999999988889999863
No 7
>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}
Probab=99.93 E-value=3.4e-26 Score=164.74 Aligned_cols=87 Identities=20% Similarity=0.281 Sum_probs=81.8
Q ss_pred eecCCceEEEEEecCCCCC--CCCCCEEEEEEEEEeC--CCcEEEccCCCCccEEEEeCCCccchHHHHHhcCCCcccEE
Q 031721 54 VTTESGLQYKDIKVGQGPS--PPVGFQVAANYVAMIP--SGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGKR 129 (154)
Q Consensus 54 ~~~~~g~~~~~~~~G~G~~--~~~gd~V~v~y~~~~~--~g~~~dss~~~~~p~~f~lG~~~~i~g~~~al~~mk~Ge~~ 129 (154)
..+++||+|+++++|+|.. ++.||.|+|||++++. ||++||||+++++|+.|.+|.+++|+||+++|.+|++|+++
T Consensus 6 ~~~~~Gv~~~vl~~G~G~~p~~~~G~~V~vhY~g~l~d~~G~~FDsS~~rg~P~~f~lG~g~vI~Gwd~gl~~M~~Ge~~ 85 (165)
T 2lkn_A 6 RLREDGIQKRVIQEGRGELPDFQDGTKATFHYRTLHSDDEGTVLDDSRARGKPMELIIGKKFKLPVWETIVCTMREGEIA 85 (165)
T ss_dssp HHHTTSCCCCEEECCSSCCCCCCTTCEEEEECEEECSSSSCCEEEESTTTTCCEEEESSSSCSCSHHHHHHTTCCTTCEE
T ss_pred cccCCCeEEEEEECCcCCCCCCCCCCEEEEEEEEEEeCCCccEEEecccCCCCEEEEecCCCccHHHHHHHhcCccCceE
Confidence 3578999999999999976 4689999999999985 59999999999999999999999999999999999999999
Q ss_pred EEEEcCCCCCC
Q 031721 130 RLYIPGPVISN 140 (154)
Q Consensus 130 ~i~ip~~~~yg 140 (154)
+|+|||+++||
T Consensus 86 ~~~ipp~laYG 96 (165)
T 2lkn_A 86 QFLCDIKHVVL 96 (165)
T ss_dssp EEECCHHHHSS
T ss_pred EEEECHHHhcC
Confidence 99999999999
No 8
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Probab=99.93 E-value=2.1e-25 Score=150.08 Aligned_cols=94 Identities=27% Similarity=0.489 Sum_probs=88.9
Q ss_pred ceEEEEEecCCCCC-CCCCCEEEEEEEEEeCCCcEEEccCCCCccEEEEeCCCccchHHHHHhcCCCcccEEEEEEcCCC
Q 031721 59 GLQYKDIKVGQGPS-PPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGKRRLYIPGPV 137 (154)
Q Consensus 59 g~~~~~~~~G~G~~-~~~gd~V~v~y~~~~~~g~~~dss~~~~~p~~f~lG~~~~i~g~~~al~~mk~Ge~~~i~ip~~~ 137 (154)
|++|+++++|+|.. ++.||.|++||++++.||++|++++.+++|+.|.+|.+++++||+++|.+|++|++++|.||+++
T Consensus 1 Gl~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~~~ip~~~ 80 (107)
T 2ppn_A 1 GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDY 80 (107)
T ss_dssp CEEEEEEECCCSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSCCSCHHHHHHHTTCCTTCEEEEEECGGG
T ss_pred CcEEEEEECcCCCcCCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEeCCCChHHHHHHHHhCCCCCCEEEEEECHHH
Confidence 78999999999988 99999999999999989999999987668999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCC
Q 031721 138 ISNTLLILHNWEEKT 152 (154)
Q Consensus 138 ~yg~~~~~~~~~~~~ 152 (154)
+||+.+..+.|+||.
T Consensus 81 ayG~~~~~~~Ip~~~ 95 (107)
T 2ppn_A 81 AYGATGHPGIIPPHA 95 (107)
T ss_dssp TTTTTCBTTTBCTTC
T ss_pred ccCCCCCCCCcCCCC
Confidence 999998877888885
No 9
>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1
Probab=99.92 E-value=4e-25 Score=154.79 Aligned_cols=97 Identities=29% Similarity=0.418 Sum_probs=91.3
Q ss_pred cCCceEEEEEecCCCC-CCCCCCEEEEEEEEEeCCCcEEEccCCCCccEEEEeCCCccchHHHHHhcCCCcccEEEEEEc
Q 031721 56 TESGLQYKDIKVGQGP-SPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGKRRLYIP 134 (154)
Q Consensus 56 ~~~g~~~~~~~~G~G~-~~~~gd~V~v~y~~~~~~g~~~dss~~~~~p~~f~lG~~~~i~g~~~al~~mk~Ge~~~i~ip 134 (154)
+++|++|+++++|+|. .++.||.|+|||++++.||++||+++.++.|+.|.+|.+++++||+++|.+|++|++++|+||
T Consensus 12 ~~~gl~~~~l~~G~g~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~~~vi~G~e~~l~gm~~Ge~~~v~ip 91 (135)
T 1r9h_A 12 KDGGVLKLIKKEGQGVVKPTTGTTVKVHYVGTLENGTKFDSSRDRGDQFSFNLGRGNVIKGWDLGVATMTKGEVAEFTIR 91 (135)
T ss_dssp CCSSEEEEEEECCBSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTTTSSCHHHHHHHTTCCBTCEEEEEEC
T ss_pred CCCcEEEEEEEccCCCcCCCCCCEEEEEEEEEECCCCEEEecCcCCCCEEEEeCCCCccHHHHHHHhcCCCCCEEEEEEC
Confidence 7899999999999997 599999999999999989999999976668999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCC
Q 031721 135 GPVISNTLLILHNWEEKT 152 (154)
Q Consensus 135 ~~~~yg~~~~~~~~~~~~ 152 (154)
++++||+.+..+.|+||.
T Consensus 92 ~~~aYG~~g~~~~Ip~~~ 109 (135)
T 1r9h_A 92 SDYGYGDAGSPPKIPGGA 109 (135)
T ss_dssp GGGTTTTTCBTTTBCTTC
T ss_pred hHHcCCCCCCCCCcCcCC
Confidence 999999988878888875
No 10
>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*
Probab=99.92 E-value=8.2e-25 Score=163.46 Aligned_cols=102 Identities=38% Similarity=0.614 Sum_probs=96.7
Q ss_pred CCceecCCceEEEEEecCCCCCCCCCCEEEEEEEEEeCCCcEEEccCCCCccEEEEeCCCccchHHHHHhcCCCcccEEE
Q 031721 51 VPMVTTESGLQYKDIKVGQGPSPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGKRR 130 (154)
Q Consensus 51 ~~~~~~~~g~~~~~~~~G~G~~~~~gd~V~v~y~~~~~~g~~~dss~~~~~p~~f~lG~~~~i~g~~~al~~mk~Ge~~~ 130 (154)
..+.++++|++|+++++|+|..++.||.|++||++++.||++||++++++.|+.|.+|.+++++||+++|.+|++|++++
T Consensus 97 ~t~~~~~sGl~~~vl~~G~G~~~~~gd~V~v~Y~g~l~dG~~fdss~~~~~P~~f~lG~g~vi~G~eeaL~gM~~Ge~~~ 176 (209)
T 3uf8_A 97 STVVTTESGLKYEDLTEGSGAEARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRR 176 (209)
T ss_dssp CCCEECTTSCEEEEEECCCSCBCCTTCEEEEEEEEEETTSCEEEESGGGTCCEEEETTSSSSCHHHHHHHTTCBTTCEEE
T ss_pred ccccCCCCceEEEEEEcCCCCcCCCCCEEEEEEEEEECCCCEEEEccccCCCEEEEeCCCccchhHHHHHhCCCCCCEEE
Confidence 34678999999999999999999999999999999999999999998888899999999999999999999999999999
Q ss_pred EEEcCCCCCCCCCCCCCCCCCC
Q 031721 131 LYIPGPVISNTLLILHNWEEKT 152 (154)
Q Consensus 131 i~ip~~~~yg~~~~~~~~~~~~ 152 (154)
|+|||++|||+.+..+.|+||.
T Consensus 177 v~Ipp~~aYG~~g~~~~IP~~s 198 (209)
T 3uf8_A 177 LTIPPQLGYGARGAAGVIPPNA 198 (209)
T ss_dssp EEECGGGTTTTTCBTTTBCTTC
T ss_pred EEECcHHhCCCCCCCCCcCCCC
Confidence 9999999999999888899985
No 11
>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1
Probab=99.92 E-value=3.7e-25 Score=160.02 Aligned_cols=101 Identities=29% Similarity=0.458 Sum_probs=94.2
Q ss_pred CCCceecCCceEEEEEecCCCCC-CCCCCEEEEEEEEEeCCCcEEEccCCCCccEEEEeCCCccchHHHHHhcCCCcccE
Q 031721 50 NVPMVTTESGLQYKDIKVGQGPS-PPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGK 128 (154)
Q Consensus 50 ~~~~~~~~~g~~~~~~~~G~G~~-~~~gd~V~v~y~~~~~~g~~~dss~~~~~p~~f~lG~~~~i~g~~~al~~mk~Ge~ 128 (154)
...+.++++|++|+++++|+|.. |+.||.|+|||++++.||++||+++.++.|+.|.+| ++|+||+++|.+|++|++
T Consensus 29 ~~~~~~~~sGl~~~vl~~G~G~~~~~~gd~V~v~Y~g~l~dG~~fdss~~~g~p~~f~lg--~vI~G~eeaL~gMk~Ge~ 106 (167)
T 1jvw_A 29 QPDAVKLPSGLVFQRIARGSGKRAPAIDDKCEVHYTGRLRDGTVFDSSRERGKPTTFRPN--EVIKGWTEALQLMREGDR 106 (167)
T ss_dssp STTEEECTTSCEEEEEECCCCSBCCCTTCCEEEEEEEECTTSCEEEEHHHHTSCEEECGG--GSCHHHHHHHTTCCTTCE
T ss_pred CCCcEECCCCEEEEEEEcCCCCcCCCCCCEEEEEEEEEECCCCEEeeccccCCCEEEEeC--chhHHHHHHHcCCCCCCE
Confidence 45678899999999999999998 999999999999999899999999877789999995 899999999999999999
Q ss_pred EEEEEcCCCCCCCCCCCCCCCCCC
Q 031721 129 RRLYIPGPVISNTLLILHNWEEKT 152 (154)
Q Consensus 129 ~~i~ip~~~~yg~~~~~~~~~~~~ 152 (154)
++|+||++++||+.+..+.|+||.
T Consensus 107 ~~~~Ip~~laYG~~g~~~~Ipp~s 130 (167)
T 1jvw_A 107 WRLFIPYDLAYGVTGGGGMIPPYS 130 (167)
T ss_dssp EEEEECGGGTTTTTCSSSSSCTTC
T ss_pred EEEEECchhhCCCCCCCCCcCCCC
Confidence 999999999999998877899885
No 12
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}
Probab=99.92 E-value=1.4e-24 Score=149.92 Aligned_cols=101 Identities=21% Similarity=0.302 Sum_probs=92.0
Q ss_pred CCceecCCceEEEEEecCC--CCCCCCCCEEEEEEEEEeC-CCcEEEccCC--CCccEEEEeCCCccchHHHHHhcCCCc
Q 031721 51 VPMVTTESGLQYKDIKVGQ--GPSPPVGFQVAANYVAMIP-SGQIFDSSLE--KGRPYIFRVGSGQVVKGLDEGILTMKT 125 (154)
Q Consensus 51 ~~~~~~~~g~~~~~~~~G~--G~~~~~gd~V~v~y~~~~~-~g~~~dss~~--~~~p~~f~lG~~~~i~g~~~al~~mk~ 125 (154)
...+.+++|++|+++++|+ |..++.||.|.|||++++. ||++||+++. .++|+.|.+|.+++++||+++|.+|++
T Consensus 5 ~~~~~~~~gl~~~~l~~g~~~g~~~~~gd~V~v~Y~g~~~~dG~~fdss~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~~ 84 (125)
T 4dip_A 5 MGALIPEPEVKIEVLQKPFICHRKTKGGDLMLVHYEGYLEKDGSLFHSTHKHNNGQPIWFTLGILEALKGWDQGLKGMCV 84 (125)
T ss_dssp CGGGCCCCCCEEEEEECCSCCSCCCCTTCEEEEEEEEEETTTCCEEEEHHHHTTTCCEEEETTSCSSCHHHHHHSTTCCT
T ss_pred CceEECCCCeEEEEEEcCCCCCCcCCCCCEEEEEEEEEECCCCcEEEEcccCCCCcCEEEEeCCCChhHHHHHHHhCCCC
Confidence 3446788999999999998 7789999999999999997 9999999973 468999999999999999999999999
Q ss_pred ccEEEEEEcCCCCCCCCCCCCCCCCCC
Q 031721 126 GGKRRLYIPGPVISNTLLILHNWEEKT 152 (154)
Q Consensus 126 Ge~~~i~ip~~~~yg~~~~~~~~~~~~ 152 (154)
|++++|+||++++||+.+.. .|+||.
T Consensus 85 Ge~~~~~ip~~~aYG~~g~~-~Ip~~~ 110 (125)
T 4dip_A 85 GEKRKLIIPPALGYGKEGKG-KIPPES 110 (125)
T ss_dssp TCEEEEEECGGGTTTTTCBT-TBCTTC
T ss_pred CCEEEEEEChHHhcCCCCCC-CCCCCC
Confidence 99999999999999998854 888885
No 13
>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A
Probab=99.92 E-value=3e-25 Score=154.22 Aligned_cols=103 Identities=38% Similarity=0.615 Sum_probs=93.4
Q ss_pred CCCceecCCceEEEEEecCCCCCCCCCCEEEEEEEEEeCCCcEEEccCCCCccEEEEeCCCccchHHHHHhcC------C
Q 031721 50 NVPMVTTESGLQYKDIKVGQGPSPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILT------M 123 (154)
Q Consensus 50 ~~~~~~~~~g~~~~~~~~G~G~~~~~gd~V~v~y~~~~~~g~~~dss~~~~~p~~f~lG~~~~i~g~~~al~~------m 123 (154)
.....++++|++|+++++|+|..++.||.|+|||++++.||++||+++++++|+.|.+|.+++++||+++|.+ |
T Consensus 4 ~~~~~~~~~Gl~~~~l~~G~G~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~~~~i~G~~~~L~G~~~~~~m 83 (129)
T 1u79_A 4 SCEFSVSPSGLAFCDKVVGYGPEAVKGQLIKAHYVGKLENGKVFDSSYNRGKPLTFRIGVGEVIKGWDQGILGSDGIPPM 83 (129)
T ss_dssp -CCCEECTTSCEEEEEECCSSCBCCTTCEEEEEEEEECTTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHHCBTTBCCC
T ss_pred CCccEECCCCeEEEEEEcCCCCCCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEeCCCCccHHHHHHhccccccccc
Confidence 3456789999999999999999999999999999999889999999986668999999999999999999998 9
Q ss_pred CcccEEEEEEcCCCCCCCCCCC-----CCCCCCC
Q 031721 124 KTGGKRRLYIPGPVISNTLLIL-----HNWEEKT 152 (154)
Q Consensus 124 k~Ge~~~i~ip~~~~yg~~~~~-----~~~~~~~ 152 (154)
++|++++|+||++++||+.+.. ..|+||.
T Consensus 84 ~~Ge~~~v~ip~~~aYG~~~~~~~~~~~~Ip~~~ 117 (129)
T 1u79_A 84 LTGGKRTLRIPPELAYGDRGAGCKGGSCLIPPAS 117 (129)
T ss_dssp BTTCEEEEEECGGGTTGGGCEEEETTEEEECTTC
T ss_pred CCCCEEEEEEChHHccCCCCCCccccCCcCCCCC
Confidence 9999999999999999988753 4677775
No 14
>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0
Probab=99.92 E-value=1.8e-24 Score=162.18 Aligned_cols=99 Identities=28% Similarity=0.434 Sum_probs=92.7
Q ss_pred CCCceecCCceEEEEEecCCCCCCCCCCEEEEEEEEEeCCCcEEEccCCCCccEEEEeCCCccchHHHHHhcCCCcccEE
Q 031721 50 NVPMVTTESGLQYKDIKVGQGPSPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGKR 129 (154)
Q Consensus 50 ~~~~~~~~~g~~~~~~~~G~G~~~~~gd~V~v~y~~~~~~g~~~dss~~~~~p~~f~lG~~~~i~g~~~al~~mk~Ge~~ 129 (154)
....+++++|++|+++++|+|..|..||.|+|||++++.||++||+| +.|+.|.+| ++|+||+++|.+|++|+++
T Consensus 109 ~~gv~~~~sGl~y~vl~~G~G~~p~~gd~V~V~Y~g~l~dG~vfDss---~~P~~f~lG--~vI~G~eeaL~gMk~Gek~ 183 (219)
T 3oe2_A 109 KPGVKELADGILMTELTPGTGPKPDANGRVEVRYVGRLPDGKIFDQS---TQPQWFRLD--SVISGWTSALQNMPTGAKW 183 (219)
T ss_dssp STTCEECGGGCEEEEEECCCSCCCCTTSEEEEEEEEECTTSCEEEEC---SSCEEEEGG--GSCHHHHHHHTTCCTTCEE
T ss_pred CCCcEECCCCeEEEEEecCCCccCCCCCEEEEEEEEEECCCCEeecc---CCcEEEEec--chhHHHHHHHhCCCCCCEE
Confidence 45578899999999999999999999999999999999999999998 689999998 8999999999999999999
Q ss_pred EEEEcCCCCCCCCCCCCCCCCCCC
Q 031721 130 RLYIPGPVISNTLLILHNWEEKTC 153 (154)
Q Consensus 130 ~i~ip~~~~yg~~~~~~~~~~~~~ 153 (154)
+|+|||+++||+.+..+.|+||..
T Consensus 184 ~v~IPp~lAYG~~g~~~~IPpnst 207 (219)
T 3oe2_A 184 RLVIPSDQAYGAEGAGDLIDPFTP 207 (219)
T ss_dssp EEEECGGGTTTTTCBTTTBCTTCC
T ss_pred EEEECchhcCCCCCCCCCCCCCCe
Confidence 999999999999998888999863
No 15
>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}
Probab=99.92 E-value=2.5e-25 Score=155.64 Aligned_cols=102 Identities=20% Similarity=0.280 Sum_probs=87.4
Q ss_pred CCceecCCceEEEEEecCCCCCCCCCCEEEEEEEEEeC-CCcEEEccCCCCccEEEEeCCCccchHHHHHhcCCCcccEE
Q 031721 51 VPMVTTESGLQYKDIKVGQGPSPPVGFQVAANYVAMIP-SGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGKR 129 (154)
Q Consensus 51 ~~~~~~~~g~~~~~~~~G~G~~~~~gd~V~v~y~~~~~-~g~~~dss~~~~~p~~f~lG~~~~i~g~~~al~~mk~Ge~~ 129 (154)
...+++++|++|+++++|+|..++.||.|+|||++++. +|++||+++.+++|+.|.+|.+++++||+++|.+|++|+++
T Consensus 19 ~~~v~~~~gl~~~vl~~G~g~~~~~gd~V~v~Y~g~l~~~G~~fdss~~~~~p~~f~lG~g~~i~G~e~aL~gm~~Ge~~ 98 (134)
T 3b7x_A 19 MLDISGDRGVLKDVIREGAGDLVAPDASVLVKYSGYLEHMDRPFDSNYFRKTPRLMKLGEDITLWGMELGLLSMRRGELA 98 (134)
T ss_dssp CEESSSSSSEEEEEEECCEEEECCTTCEEEEEEEEECTTCSSCSEEC-------CEEC-CCCCCHHHHHHHHTCEETCEE
T ss_pred cceeeCCCCEEEEEEEcCCCCCCCCCCEEEEEEEEEECCCCeEEEecCCCCCCEEEEcCCcchhHHHHHHHhCCCCCCEE
Confidence 33466899999999999999999999999999999987 69999999877789999999999999999999999999999
Q ss_pred EEEEcCCCCCCCCCCCCCCCCCC
Q 031721 130 RLYIPGPVISNTLLILHNWEEKT 152 (154)
Q Consensus 130 ~i~ip~~~~yg~~~~~~~~~~~~ 152 (154)
+|+||++++||+.+..+.|+||.
T Consensus 99 ~v~ip~~~aYG~~~~~~~Ip~~~ 121 (134)
T 3b7x_A 99 RFLFKPNYAYGTLGCPPLIPPNT 121 (134)
T ss_dssp EEEECGGGTTTTTCBTTTBCTTC
T ss_pred EEEECHHHCcCCCCCCCCcCcCC
Confidence 99999999999998877898885
No 16
>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*
Probab=99.92 E-value=1.4e-24 Score=162.39 Aligned_cols=101 Identities=29% Similarity=0.466 Sum_probs=94.3
Q ss_pred CCCceecCCceEEEEEecCCCCCCCCCCEEEEEEEEEeCCCcEEEccCCCCccEEEEeCCCccchHHHHHhcCCCcccEE
Q 031721 50 NVPMVTTESGLQYKDIKVGQGPSPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGKR 129 (154)
Q Consensus 50 ~~~~~~~~~g~~~~~~~~G~G~~~~~gd~V~v~y~~~~~~g~~~dss~~~~~p~~f~lG~~~~i~g~~~al~~mk~Ge~~ 129 (154)
....+++++|++|+++++|+|..|+.||.|+|||++++.||++||+++.++.|+.|.+| ++|+||+++|.+|++|+++
T Consensus 98 ~~~v~~~~sGl~y~vl~~G~G~~p~~gD~V~V~Y~g~l~dG~vfdss~~~g~p~~f~lg--~vI~G~eeaL~gMk~Gek~ 175 (213)
T 1fd9_A 98 KPGVVVLPSGLQYKVINSGNGVKPGKSDTVTVEYTGRLIDGTVFDSTEKTGKPATFQVS--QVIPGWTEALQLMPAGSTW 175 (213)
T ss_dssp STTEEECTTSCEEEEEECCCSCCCCTTCEEEEEEEEEETTSCEEEEHHHHCSCEEEEGG--GSCHHHHHHHTTCCTTCEE
T ss_pred cCCcEECCCccEEEEEecCCCccCCCCCEEEEEEEEEECCCCEEeeccccCCCEEEEcC--chhhHHHHHHcCCCCCCEE
Confidence 45678899999999999999999999999999999999999999999877789999995 8999999999999999999
Q ss_pred EEEEcCCCCCCCCCCCCCCCCCC
Q 031721 130 RLYIPGPVISNTLLILHNWEEKT 152 (154)
Q Consensus 130 ~i~ip~~~~yg~~~~~~~~~~~~ 152 (154)
+|+||++++||+.+..+.|+||.
T Consensus 176 ~v~IP~~laYG~~g~~~~Ipp~s 198 (213)
T 1fd9_A 176 EIYVPSGLAYGPRSVGGPIGPNE 198 (213)
T ss_dssp EEEECGGGTTTTCCCSSSCCTTC
T ss_pred EEEECchhccCccCCCCCCCCCC
Confidence 99999999999988777899885
No 17
>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}
Probab=99.92 E-value=3.4e-24 Score=156.78 Aligned_cols=101 Identities=18% Similarity=0.211 Sum_probs=93.8
Q ss_pred CceecCCceEEEEEecCCCCCCCCCCEEEEEEEEEeC-CCcEEEccCCCCccEEEEeCCC-ccchHHHHHhcCCCcccEE
Q 031721 52 PMVTTESGLQYKDIKVGQGPSPPVGFQVAANYVAMIP-SGQIFDSSLEKGRPYIFRVGSG-QVVKGLDEGILTMKTGGKR 129 (154)
Q Consensus 52 ~~~~~~~g~~~~~~~~G~G~~~~~gd~V~v~y~~~~~-~g~~~dss~~~~~p~~f~lG~~-~~i~g~~~al~~mk~Ge~~ 129 (154)
...++++|++|+++++|+|..++.||.|+|||++++. +|++|++++.++.|+.|.+|.+ ++|+||+++|.+|++|+++
T Consensus 43 ~~~~~~~gl~~~vl~~G~G~~~~~Gd~V~v~Y~g~l~~dG~~fdss~~~~~p~~f~lG~g~~vi~G~eeaL~gMk~Ge~~ 122 (180)
T 2f4e_A 43 EAEVLDEKVSKQIIKEGHGSKPSKYSTCFLHYRAWTKNSQHKFEDTWHEQQPIELVLGKEKKELAGLAIGVASMKSGERA 122 (180)
T ss_dssp CCEEEETTEEEEEEECCBSCCBCTTCEEEEEEEEEETTTCCEEEETTTTTCCEEEETTSCCGGGHHHHHHHTTCCBTCEE
T ss_pred CcEECCCceEEEEEeCCCCCCCCCCCEEEEEEEEEECCCCcEEeccCccCCCEEEEeCCCCchhHHHHHHHhCCCCCCEE
Confidence 4578899999999999999999999999999999987 6999999998888999999999 9999999999999999999
Q ss_pred EEEEcCCCCCCCCCC--CCCCCCCC
Q 031721 130 RLYIPGPVISNTLLI--LHNWEEKT 152 (154)
Q Consensus 130 ~i~ip~~~~yg~~~~--~~~~~~~~ 152 (154)
+|+||++++||+.+. .+.|.||.
T Consensus 123 ~v~iPp~~aYG~~g~~~~~~Ip~~s 147 (180)
T 2f4e_A 123 LVHVGWELAYGKEGNFSFPNVPPMA 147 (180)
T ss_dssp EEEECGGGTTTTTCBSSSSCBCTTC
T ss_pred EEEECchHhCCcCCcccCCCcCCCC
Confidence 999999999998876 46788875
No 18
>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A
Probab=99.91 E-value=6.1e-24 Score=147.53 Aligned_cols=100 Identities=24% Similarity=0.349 Sum_probs=89.3
Q ss_pred ceecCCceEE-EEEecC---CCCCCCCCCEEEEEEEEEe-CCCcEEEccCCCCccEEEEeCCCccchHHHHHhcCCCccc
Q 031721 53 MVTTESGLQY-KDIKVG---QGPSPPVGFQVAANYVAMI-PSGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGG 127 (154)
Q Consensus 53 ~~~~~~g~~~-~~~~~G---~G~~~~~gd~V~v~y~~~~-~~g~~~dss~~~~~p~~f~lG~~~~i~g~~~al~~mk~Ge 127 (154)
...+++|+.| +++++| +|..++.||.|+|||++++ .||++||+++.++.|+.|.+|.+++++||+++|.+|++|+
T Consensus 10 ~~~~~~g~~~~~il~~G~~g~g~~~~~gd~V~v~Y~g~~~~dG~~fd~s~~~~~p~~f~lG~g~~i~g~e~~l~gm~~Ge 89 (129)
T 2vn1_A 10 VELTADGGVIKTILKKGDEGEENIPKKGNEVTVHYVGKLESTGKVFDSSFDRNVPFKFHLEQGEVIKGWDICVSSMRKNE 89 (129)
T ss_dssp EECSTTSSEEEEEEECCCCSGGGSCCTTCEEEEEEEEEETTTCCEEEEGGGTTCCEEEETTSSSSCHHHHHHHTTCCTTC
T ss_pred cEECCCCCEEEEEEeCCCCCCCCcCCCCCEEEEEEEEEECCCCeEEEecCCCCccEEEEeCCCCcCHHHHHHHhCCCCCC
Confidence 3556777665 688966 4577999999999999998 7999999998777899999999999999999999999999
Q ss_pred EEEEEEcCCCCCCCCCCCCCCCCCC
Q 031721 128 KRRLYIPGPVISNTLLILHNWEEKT 152 (154)
Q Consensus 128 ~~~i~ip~~~~yg~~~~~~~~~~~~ 152 (154)
+++|+||++++||+.+..+.|+||.
T Consensus 90 ~~~v~ip~~~aYG~~~~~~~Ip~~~ 114 (129)
T 2vn1_A 90 KCLVRIESMYGYGDEGCGESIPGNS 114 (129)
T ss_dssp EEEEEECGGGTTTTTCBTTTBCTTC
T ss_pred EEEEEEChHHcCCCCCCCCCcCCCC
Confidence 9999999999999988877888885
No 19
>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}
Probab=99.91 E-value=1.1e-23 Score=150.84 Aligned_cols=95 Identities=16% Similarity=0.171 Sum_probs=88.0
Q ss_pred eecCCce-EEEEEecCCCC--CCCCCCEEEEEEEEEeCCCcEEEccCCCCccEEEEeCCCccchHHHHHhcCCCcccEEE
Q 031721 54 VTTESGL-QYKDIKVGQGP--SPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGKRR 130 (154)
Q Consensus 54 ~~~~~g~-~~~~~~~G~G~--~~~~gd~V~v~y~~~~~~g~~~dss~~~~~p~~f~lG~~~~i~g~~~al~~mk~Ge~~~ 130 (154)
.++++|+ +|+++++|+|. .++.||.|+|||++++.||++||++ +|+.|.+|.+++|+||+++|.+|++|++++
T Consensus 38 ~~~~sG~v~~~vl~~G~G~~~~p~~gd~V~v~Y~g~l~dG~~fds~----~p~~f~lG~g~vi~G~eeaL~gMk~Ge~~~ 113 (157)
T 2jwx_A 38 DILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEE----PELVFTLGDCDVIQALDLSVPLMDVGETAM 113 (157)
T ss_dssp ESSSSSSEEEEEEECCSTTSCCCCTTEEEEEEEEEECTTSCEEEEE----EEEEEETTTTSSCHHHHHHTTTSCTTCEEE
T ss_pred eECCCCCEEEEEEEccCCCccCCCCCCEEEEEEEEEECCCCEeecC----CCEEEEeCCCChhHHHHHHHcCCCCCCEEE
Confidence 3778897 89999999997 7999999999999999899999984 799999999999999999999999999999
Q ss_pred EEEcCCCCCCCCC-CCCCCCCCC
Q 031721 131 LYIPGPVISNTLL-ILHNWEEKT 152 (154)
Q Consensus 131 i~ip~~~~yg~~~-~~~~~~~~~ 152 (154)
|+||++++||+.+ ..+.|+||.
T Consensus 114 v~IP~~~aYG~~g~~~~~IPp~s 136 (157)
T 2jwx_A 114 VTADSKYCYGPQGSRSPYIPPHA 136 (157)
T ss_dssp EEECGGGTTTTTCCSSSCCCTTC
T ss_pred EEECchhcCCcccccCCCcCCCC
Confidence 9999999999988 666798885
No 20
>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A
Probab=99.91 E-value=1.2e-23 Score=158.49 Aligned_cols=99 Identities=29% Similarity=0.509 Sum_probs=91.8
Q ss_pred CCceecCCceEEEEEecCCCCCCCCCCEEEEEEEEEeCCCcEEEccCCCCccEEEEeCCCccchHHHHHhcCCCcccEEE
Q 031721 51 VPMVTTESGLQYKDIKVGQGPSPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGKRR 130 (154)
Q Consensus 51 ~~~~~~~~g~~~~~~~~G~G~~~~~gd~V~v~y~~~~~~g~~~dss~~~~~p~~f~lG~~~~i~g~~~al~~mk~Ge~~~ 130 (154)
....++++|++|+++++|+|..|+.||.|+|||++++.||++||+++.++.|+.|.+| ++|+||+++|.+|++|++++
T Consensus 114 ~~v~~~~sGl~y~vl~~G~G~~p~~gD~V~V~Y~g~l~dG~vfdss~~~g~p~~f~lg--~vI~G~eeaL~gMk~Gek~~ 191 (224)
T 1q6h_A 114 KGVKTSSTGLVYQVVEAGKGEAPKDSDTVVVNYKGTLIDGKEFDNSYTRGEPLSFRLD--GVIPGWTEGLKNIKKGGKIK 191 (224)
T ss_dssp TTEEECTTSCEEEEEECCSSCCCCTTCEEEEEEEEEETTSCEEEEGGGGTSCEEEEGG--GSCHHHHHHGGGSCTTCEEE
T ss_pred CCeEECCCceEEEEEecccCccccCCCEEEEEEEEEeCCCCEEeeccccCCCEEEEcC--CcchhHHHHHcCCCCCCEEE
Confidence 4456789999999999999999999999999999999999999999887889999995 89999999999999999999
Q ss_pred EEEcCCCCCCCCCCCCCCCCCC
Q 031721 131 LYIPGPVISNTLLILHNWEEKT 152 (154)
Q Consensus 131 i~ip~~~~yg~~~~~~~~~~~~ 152 (154)
|+||++++||+.+..+ |+||.
T Consensus 192 v~IP~~laYG~~g~~~-IPp~s 212 (224)
T 1q6h_A 192 LVIPPELAYGKAGVPG-IPPNS 212 (224)
T ss_dssp EEECGGGTTTTTCBTT-BCTTC
T ss_pred EEECchhhcCcCCCCC-CCCCC
Confidence 9999999999988754 99885
No 21
>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A
Probab=99.90 E-value=2e-23 Score=142.88 Aligned_cols=95 Identities=16% Similarity=0.171 Sum_probs=87.9
Q ss_pred eecCCc-eEEEEEecCCCC--CCCCCCEEEEEEEEEeCCCcEEEccCCCCccEEEEeCCCccchHHHHHhcCCCcccEEE
Q 031721 54 VTTESG-LQYKDIKVGQGP--SPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGKRR 130 (154)
Q Consensus 54 ~~~~~g-~~~~~~~~G~G~--~~~~gd~V~v~y~~~~~~g~~~dss~~~~~p~~f~lG~~~~i~g~~~al~~mk~Ge~~~ 130 (154)
..+++| ++|+++++|+|. .++.||.|++||++++.||++|+++ +|+.|.+|.+++++||+++|.+|++|++++
T Consensus 8 ~~~~~g~~~~~vl~~G~G~~~~~~~gd~V~v~y~g~~~dG~~~ds~----~p~~f~lG~~~~i~g~e~~l~gm~~Ge~~~ 83 (118)
T 2awg_A 8 DILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEE----PELVFTLGDCDVIQALDLSVPLMDVGETAM 83 (118)
T ss_dssp ESSSSSSEEEEEEECCCTTCCCCCTTSEEEEEEEEECTTSCEEEEE----EEEEEETTSSCSCHHHHHHGGGSCTTCEEE
T ss_pred EECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECCCCEEECC----CCEEEEECCCChhHHHHHHHhCCCCCCEEE
Confidence 456677 999999999997 6999999999999998899999984 799999999999999999999999999999
Q ss_pred EEEcCCCCCCCCCCCCCCCCCC
Q 031721 131 LYIPGPVISNTLLILHNWEEKT 152 (154)
Q Consensus 131 i~ip~~~~yg~~~~~~~~~~~~ 152 (154)
|.||++++||+.+..+.|+||.
T Consensus 84 ~~ip~~~ayG~~~~~~~Ip~~~ 105 (118)
T 2awg_A 84 VTADSKYCYGPQGRSPYIPPHA 105 (118)
T ss_dssp EEECGGGTTTTTCBTTTBCTTC
T ss_pred EEEChHHccCCCCCCCccCCCC
Confidence 9999999999998877888885
No 22
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=99.89 E-value=1.5e-22 Score=157.18 Aligned_cols=97 Identities=25% Similarity=0.355 Sum_probs=92.2
Q ss_pred cCCceEEEEEecCCCCC-CCCCCEEEEEEEEEeCCCcEEEccCCCCccEEEEeCCCccchHHHHHhcCCCcccEEEEEEc
Q 031721 56 TESGLQYKDIKVGQGPS-PPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGKRRLYIP 134 (154)
Q Consensus 56 ~~~g~~~~~~~~G~G~~-~~~gd~V~v~y~~~~~~g~~~dss~~~~~p~~f~lG~~~~i~g~~~al~~mk~Ge~~~i~ip 134 (154)
.++||+|+++++|+|.. ++.||.|+|||++++.||++||+++++++|+.|.+|.+++|+||+++|.+|++|++++|+||
T Consensus 49 ~~~gl~~~vl~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~e~aL~gm~~Ge~~~v~ip 128 (280)
T 1q1c_A 49 QDEGVLKVIKREGTGTEMPMIGDRVFVHYTGWLLDGTKFDSSLDRKDKFSFDLGKGEVIKAWDIAIATMKVGEVCHITCK 128 (280)
T ss_dssp CSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTSCEEEESTTSSSCEEEETTTTSSCHHHHHHHTTCCTTCEEEEEEC
T ss_pred CCCceEEEEEeCCCCCcCCCCCCEEEEEEEEEECCCCEEEecccCCCCEEEEECCcChhHHHHHHHhcCCCCCEEEEEEC
Confidence 68899999999999988 99999999999999999999999987778999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCC
Q 031721 135 GPVISNTLLILHNWEEKT 152 (154)
Q Consensus 135 ~~~~yg~~~~~~~~~~~~ 152 (154)
++++||+.+..+.|+||.
T Consensus 129 p~~aYG~~g~~~~Ip~~~ 146 (280)
T 1q1c_A 129 PEYAYGSAGSPPKIPPNA 146 (280)
T ss_dssp GGGTTTTTCBTTTBCTTC
T ss_pred cHHhCCCcCccCCCCCCC
Confidence 999999988888888885
No 23
>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.88 E-value=8.7e-23 Score=142.85 Aligned_cols=96 Identities=16% Similarity=0.179 Sum_probs=87.5
Q ss_pred ceecCCc-eEEEEEecCCCC--CCCCCCEEEEEEEEEeCCCcEEEccCCCCccEEEEeCCCccchHHHHHhcCCCcccEE
Q 031721 53 MVTTESG-LQYKDIKVGQGP--SPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGKR 129 (154)
Q Consensus 53 ~~~~~~g-~~~~~~~~G~G~--~~~~gd~V~v~y~~~~~~g~~~dss~~~~~p~~f~lG~~~~i~g~~~al~~mk~Ge~~ 129 (154)
...+++| ++|+++++|+|. .++.||.|+|||++++.||++|+++ +|+.|.+|.+++++||+++|.+|++|+++
T Consensus 11 ~~~~~~g~l~~~vl~~G~G~~~~~~~gd~V~v~Y~g~~~dG~~fds~----~p~~f~lG~g~~i~G~e~~L~gm~~Ge~~ 86 (135)
T 2d9f_A 11 LDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEE----PELVFTLGDCDVIQALDLSVPLMDVGETA 86 (135)
T ss_dssp EESSSSSSSEEEEEECCCSSCCCCCTTSEEEEEEEEEESSSCEEEEE----EEEEEETTSCCSCTTTTTTGGGSCTTCEE
T ss_pred cEECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECCCCEEecC----CCEEEEeCCCChhHHHHHHHhCCCCCCEE
Confidence 3456677 999999999997 7999999999999999899999973 79999999999999999999999999999
Q ss_pred EEEEcCCCCCCCCC-CCCCCCCCC
Q 031721 130 RLYIPGPVISNTLL-ILHNWEEKT 152 (154)
Q Consensus 130 ~i~ip~~~~yg~~~-~~~~~~~~~ 152 (154)
+|+||++++||+.+ ..+.|.||.
T Consensus 87 ~v~ip~~~aYG~~~~~~~~Ip~~~ 110 (135)
T 2d9f_A 87 MVTADSKYCYGPQGSRSPYIPPHA 110 (135)
T ss_dssp EEEECHHHHTCTTCCSSSCCCTTC
T ss_pred EEEEChhHccCcCCcCCCccCCCC
Confidence 99999999999988 666788875
No 24
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.87 E-value=6.6e-22 Score=131.83 Aligned_cols=83 Identities=31% Similarity=0.494 Sum_probs=77.4
Q ss_pred CCCCCCCCEEEEEEEEEeCCCcEEEccCCCCccEEEEeCCCccchHHHHHhcCCCcccEEEEEEcCCCCCCCCCCCCCCC
Q 031721 70 GPSPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGKRRLYIPGPVISNTLLILHNWE 149 (154)
Q Consensus 70 G~~~~~gd~V~v~y~~~~~~g~~~dss~~~~~p~~f~lG~~~~i~g~~~al~~mk~Ge~~~i~ip~~~~yg~~~~~~~~~ 149 (154)
|..++.||.|++||++++.||++|++++.+++|+.|.+|.+++++||+++|.+|++|++++|.||++++||+.+..+.|+
T Consensus 3 g~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~v~ip~~~ayG~~~~~~~Ip 82 (102)
T 2pbc_A 3 PIKSRKGDVLHMHYTGKLEDGTEFDSSLPQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPKIP 82 (102)
T ss_dssp CCCCCTTCEEEEEEEEECTTSCEEEESTTTTCCEEEETTSSSSCHHHHTTSTTCCTTCEEEEEECGGGTTTTTCBTTTBC
T ss_pred CCcCCCCCEEEEEEEEEECCCCEEEeCCCCCCCEEEEeCCCCccHHHHHHHhCCCCCCEEEEEECHHHCcCCCCCCCCcC
Confidence 45689999999999999889999999987778999999999999999999999999999999999999999988877788
Q ss_pred CCC
Q 031721 150 EKT 152 (154)
Q Consensus 150 ~~~ 152 (154)
||.
T Consensus 83 ~~~ 85 (102)
T 2pbc_A 83 GGA 85 (102)
T ss_dssp TTC
T ss_pred cCC
Confidence 875
No 25
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.87 E-value=2.7e-22 Score=164.29 Aligned_cols=98 Identities=29% Similarity=0.465 Sum_probs=71.8
Q ss_pred ecCCceEEEEEecCCCCC-CCCCCEEEEEEEEEeCCCcEEEccCCCCccEEEEeCCCccchHHHHHhcCCCcccEEEEEE
Q 031721 55 TTESGLQYKDIKVGQGPS-PPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGKRRLYI 133 (154)
Q Consensus 55 ~~~~g~~~~~~~~G~G~~-~~~gd~V~v~y~~~~~~g~~~dss~~~~~p~~f~lG~~~~i~g~~~al~~mk~Ge~~~i~i 133 (154)
++++|++|+++++|+|.. |+.||.|+|||++++.||++||+|+.++.|+.|.+|.+++|+||+++|.+|++|++++|+|
T Consensus 28 ~~~~g~~~~~~~~G~g~~~~~~gd~v~v~y~~~~~~g~~~dss~~~~~p~~~~~g~~~~i~g~~~~l~~m~~Ge~~~~~i 107 (457)
T 1kt0_A 28 KKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKRGEICHLLC 107 (457)
T ss_dssp -----CEEEC--------CCCBTCEEEEEEEEEC-----CBC------CEEEETTSTTSCHHHHHHHTTCCTTCEEEEEE
T ss_pred CCCCcEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCEEeccCCCCCCeEEEeCCcchhhHHHHHHhhCCCCCEEEEEE
Confidence 378999999999999988 9999999999999988999999999888899999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCCCC
Q 031721 134 PGPVISNTLLILHNWEEKT 152 (154)
Q Consensus 134 p~~~~yg~~~~~~~~~~~~ 152 (154)
||+++||+.+..+.|+||.
T Consensus 108 ~~~~~yg~~g~~~~i~~~~ 126 (457)
T 1kt0_A 108 KPEYAYGSAGSLPKIPSNA 126 (457)
T ss_dssp CGGGTTTTTCBTTTBCTTC
T ss_pred ChHHhccccCCCCCCCCCC
Confidence 9999999998888899886
No 26
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.86 E-value=1.1e-21 Score=155.02 Aligned_cols=102 Identities=18% Similarity=0.206 Sum_probs=92.4
Q ss_pred CCceecCCceEEEEEecCCCCCCCCCCEEEEEEEEEeC-CCcEEEccCCCCccEEEEeCCC-ccchHHHHHhcCCCcccE
Q 031721 51 VPMVTTESGLQYKDIKVGQGPSPPVGFQVAANYVAMIP-SGQIFDSSLEKGRPYIFRVGSG-QVVKGLDEGILTMKTGGK 128 (154)
Q Consensus 51 ~~~~~~~~g~~~~~~~~G~G~~~~~gd~V~v~y~~~~~-~g~~~dss~~~~~p~~f~lG~~-~~i~g~~~al~~mk~Ge~ 128 (154)
....++++|++|+++++|+|..|+.||.|+|||++++. +|++||+++.++.|+.|.+|.+ ++|+||+++|.+|++|++
T Consensus 42 ~~~~~~~~~~~~~~~~~g~g~~~~~gd~v~v~y~g~~~~~g~~fd~~~~~~~~~~~~lg~~~~~i~g~e~~l~~m~~Ge~ 121 (338)
T 2if4_A 42 SEAEVLDEKVSKQIIKEGHGSKPSKYSTCFLHYRAWTKNSQHKFEDTWHEQQPIELVLGKEKKELAGLAIGVASMKSGER 121 (338)
T ss_dssp SCCEEEETTEEEEEEECCBSCCCCTTCEEEEEEEEEETTTCCCCEEHHHHTCCEEEETTSCCGGGHHHHHHHHHCCBTCE
T ss_pred cCceeCCCCeEEEEEeCCCCCCCCCCCEEEEEEEEEEcCCCcEeecccCCCCCeEEEcCCCCcccHHHHHHHhcCCCCCe
Confidence 34567889999999999999999999999999999986 4999999987778999999998 899999999999999999
Q ss_pred EEEEEcCCCCCCCCCC--CCCCCCCC
Q 031721 129 RRLYIPGPVISNTLLI--LHNWEEKT 152 (154)
Q Consensus 129 ~~i~ip~~~~yg~~~~--~~~~~~~~ 152 (154)
++|.||++++||..+. .+.|++|.
T Consensus 122 ~~~~i~~~~~yg~~~~~~~~~ip~~~ 147 (338)
T 2if4_A 122 ALVHVGWELAYGKEGNFSFPNVPPMA 147 (338)
T ss_dssp EEEEECGGGSSCSSCCCSSSCCCTTC
T ss_pred EEEEECHHHhcCCCCCCCCCCCCCCC
Confidence 9999999999998876 36677764
No 27
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=99.84 E-value=1.1e-22 Score=162.68 Aligned_cols=100 Identities=32% Similarity=0.499 Sum_probs=0.0
Q ss_pred ceecCCceEEEEEecCCC-CCCCCCCEEEEEEEEEeCCCcEEEccCCCCccEEEEeCCCccchHHHHHhcCCCcccEEEE
Q 031721 53 MVTTESGLQYKDIKVGQG-PSPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGKRRL 131 (154)
Q Consensus 53 ~~~~~~g~~~~~~~~G~G-~~~~~gd~V~v~y~~~~~~g~~~dss~~~~~p~~f~lG~~~~i~g~~~al~~mk~Ge~~~i 131 (154)
...+++|++|+++++|+| ..|+.||.|.+||++++.||++||+++.+++|+.|.+|.+++|+||+++|.+|++|++++|
T Consensus 6 ~~~~~~Gl~~~i~~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~~~lG~g~~i~g~e~~l~gm~~Ge~~~~ 85 (356)
T 3jxv_A 6 NEIGKQGLKKKLLKEGEGWDTPEVGDEVEVHYTGTLLDGKKFDSSRDRDDTFKFKLGQGQVIKGWDQGIKTMKKGENALF 85 (356)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceECCCCeEEEEEEeecCCccCCCCCEEEEEEEEEECCCCEEEEcccCCCcEEEEeCCCccchHHHHHHhcCCCCCEEEE
Confidence 356789999999999999 4699999999999999999999999998888999999999999999999999999999999
Q ss_pred EEcCCCCCCCCCCCCCCCCCC
Q 031721 132 YIPGPVISNTLLILHNWEEKT 152 (154)
Q Consensus 132 ~ip~~~~yg~~~~~~~~~~~~ 152 (154)
+|||+++||+.+..+.|+||.
T Consensus 86 ~ip~~~aYG~~g~~~~Ip~~~ 106 (356)
T 3jxv_A 86 TIPPELAYGESGSPPTIPANA 106 (356)
T ss_dssp ---------------------
T ss_pred EEChHHhCCCCCCCCCcCCCC
Confidence 999999999998888888874
No 28
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=99.82 E-value=9.7e-20 Score=145.61 Aligned_cols=99 Identities=20% Similarity=0.319 Sum_probs=88.2
Q ss_pred eecCCceEEEEEecCCC-CCCCCCCEEEEEEEEEeCCCcEEEcc-CCCCccEEEEeCCCccchHHHHHhcCCCcccEEEE
Q 031721 54 VTTESGLQYKDIKVGQG-PSPPVGFQVAANYVAMIPSGQIFDSS-LEKGRPYIFRVGSGQVVKGLDEGILTMKTGGKRRL 131 (154)
Q Consensus 54 ~~~~~g~~~~~~~~G~G-~~~~~gd~V~v~y~~~~~~g~~~dss-~~~~~p~~f~lG~~~~i~g~~~al~~mk~Ge~~~i 131 (154)
+..+.+++++++++|+| ..++.||.|+|||++++.||++|+++ +.+++|+.|.+|.+++|+||+++|.+|++|++++|
T Consensus 240 v~~d~~~~~~i~~~g~g~~~~~~gd~V~v~y~g~l~dG~~fd~~~~~~~~p~~f~~G~g~~i~G~e~~l~gm~~Ge~~~v 319 (356)
T 3jxv_A 240 IGDDKKILKKVLKEXEGYERPNEGAVVTVKITGKLQDGTVFLKKGHDEQEPFEFKTDEEAVIEGLDRAVLNMKKGEVALV 319 (356)
T ss_dssp ESTTCCEEEEEEECCBSSCCCCTTCEEEEEEEEEESSSCEEEEESCTTSCCCEEETTTTSSCHHHHHHHTTCCBTCEEEE
T ss_pred cccccceeEEeeecccccCCCCCCCEEEEEEEEEECCCCEEeeccccCCcCEEEEECCCccchHHHHHHhCCCCCCEEEE
Confidence 44578999999999999 56999999999999999999999988 35578999999999999999999999999999999
Q ss_pred EEcCCCCCCCCC--CCCCCCCCC
Q 031721 132 YIPGPVISNTLL--ILHNWEEKT 152 (154)
Q Consensus 132 ~ip~~~~yg~~~--~~~~~~~~~ 152 (154)
+|||+++||+.+ ....|+||.
T Consensus 320 ~ip~~~aYG~~~~~~~~~Ip~~~ 342 (356)
T 3jxv_A 320 TIPPEYAYGSTESKQDAIVPPNS 342 (356)
T ss_dssp EECGGGTTTTSCEESSSEECTTC
T ss_pred EEChHHccCCCCcCCCCcCCcCC
Confidence 999999999876 335566664
No 29
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=99.77 E-value=5e-19 Score=127.82 Aligned_cols=72 Identities=21% Similarity=0.385 Sum_probs=68.3
Q ss_pred CCCCCCEEEEEEEEEeCCCcEEEccCCCCccEEEEeCCCccchHHHHHhcCCCcccEEEEEEcCCCCCCCCC
Q 031721 72 SPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGKRRLYIPGPVISNTLL 143 (154)
Q Consensus 72 ~~~~gd~V~v~y~~~~~~g~~~dss~~~~~p~~f~lG~~~~i~g~~~al~~mk~Ge~~~i~ip~~~~yg~~~ 143 (154)
.++.||.|++||++++.||++||+|+.+++|+.|.+|.+++|+||+++|.+|++|++++|.|||++|||+.+
T Consensus 24 ~i~~gd~V~v~Y~g~l~dG~vfDss~~~~~P~~f~lG~g~vipG~eeaL~gm~~Ge~~~v~Ipp~~AYG~~~ 95 (169)
T 4dt4_A 24 SVQSNSAVLVHFTLKLDDGTTAESTRNNGKPALFRLGDASLSEGLEQHLLGLKVGDKTTFSLEPDAAFGVPS 95 (169)
T ss_dssp SCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHTTCCTTCEEEEEECGGGTTCCCC
T ss_pred cCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEChHHhcCCCC
Confidence 589999999999999999999999987678999999999999999999999999999999999999999854
No 30
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=99.77 E-value=6.4e-19 Score=125.98 Aligned_cols=70 Identities=31% Similarity=0.473 Sum_probs=65.4
Q ss_pred CCCCCEEEEEEEEEeCCCcEEEccCCC-------------CccEEEEeCCCccchHHHHHhcCCCcccEEEEEEcCCCCC
Q 031721 73 PPVGFQVAANYVAMIPSGQIFDSSLEK-------------GRPYIFRVGSGQVVKGLDEGILTMKTGGKRRLYIPGPVIS 139 (154)
Q Consensus 73 ~~~gd~V~v~y~~~~~~g~~~dss~~~-------------~~p~~f~lG~~~~i~g~~~al~~mk~Ge~~~i~ip~~~~y 139 (154)
+++||.|++||++++ ||++||+|+.. ++|+.|.+|.+++|+||+++|.+|++|++++|.|||++||
T Consensus 2 i~~Gd~V~v~Y~g~l-dG~vfDss~~~~a~~~g~~~~~~~~~P~~f~vG~g~vi~G~eeaL~gm~~Ge~~~v~Ipp~~aY 80 (157)
T 3pr9_A 2 VEKGKMVKISYDGYV-DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEKAF 80 (157)
T ss_dssp CCTTCEEEEEEEEEE-TTEEEEESCHHHHHHHTCCCTTSCCSCEEEETTSSSSCHHHHHHHHHCCTTCEEEEEECGGGTT
T ss_pred CCCCCEEEEEEEEEE-CCEEEEeccccccccccccccccCCCCEEEEECCCcHHHHHHHHHcCCCCCCEEEEEECcHHhc
Confidence 688999999999999 99999999752 3799999999999999999999999999999999999999
Q ss_pred CCCC
Q 031721 140 NTLL 143 (154)
Q Consensus 140 g~~~ 143 (154)
|+.+
T Consensus 81 G~~~ 84 (157)
T 3pr9_A 81 GKRD 84 (157)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 9865
No 31
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=99.74 E-value=2.1e-18 Score=122.64 Aligned_cols=71 Identities=30% Similarity=0.612 Sum_probs=65.9
Q ss_pred CCCCCEEEEEEEEEeCCCcEEEccCC-------------CCccEEEEeCCCccchHHHHHhcCCCcccEEEEEEcCCCCC
Q 031721 73 PPVGFQVAANYVAMIPSGQIFDSSLE-------------KGRPYIFRVGSGQVVKGLDEGILTMKTGGKRRLYIPGPVIS 139 (154)
Q Consensus 73 ~~~gd~V~v~y~~~~~~g~~~dss~~-------------~~~p~~f~lG~~~~i~g~~~al~~mk~Ge~~~i~ip~~~~y 139 (154)
++.||.|++||++++.||++||+|+. ...|+.|.+|.+++++||+++|.+|++|++++|.|||++||
T Consensus 2 i~~gd~V~v~Y~g~~~dG~~fdss~~~~a~~~g~~~~~~~~~P~~f~~G~g~vi~G~eeaL~gm~~Ge~~~v~ipp~~aY 81 (151)
T 1ix5_A 2 VDKGVKIKVDYIGKLESGDVFDTSIEEVAKEAGIYAPDREYEPLEFVVGEGQLIQGFEEAVLDMEVGDEKTVKIPAEKAY 81 (151)
T ss_dssp CCTTCEEEECCEECCTTSCCCEESCHHHHHHHTCCCSSCCCCCEEEETTTTCSCHHHHHHHHTCCTTCCCEEEECTTTSS
T ss_pred CCCCCEEEEEEEEEECCCCEEEecchhhcccccccccccCCCCEEEEECCCChhHHHHHHHcCCCCCCEEEEEECcHHHC
Confidence 67899999999999889999999973 33699999999999999999999999999999999999999
Q ss_pred CCCC
Q 031721 140 NTLL 143 (154)
Q Consensus 140 g~~~ 143 (154)
|+.+
T Consensus 82 G~~~ 85 (151)
T 1ix5_A 82 GNRN 85 (151)
T ss_dssp CSCC
T ss_pred CCCC
Confidence 9765
No 32
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=99.74 E-value=1.1e-17 Score=129.78 Aligned_cols=91 Identities=20% Similarity=0.340 Sum_probs=81.8
Q ss_pred cCCceEEEEEecCCCCC-CCCCCEEEEEEEEEeCCCcEEEccCCCCccEEEEeCCCc---cchHHHHHhcCCCcccEEEE
Q 031721 56 TESGLQYKDIKVGQGPS-PPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQ---VVKGLDEGILTMKTGGKRRL 131 (154)
Q Consensus 56 ~~~g~~~~~~~~G~G~~-~~~gd~V~v~y~~~~~~g~~~dss~~~~~p~~f~lG~~~---~i~g~~~al~~mk~Ge~~~i 131 (154)
.+.|++|+++++|+|.. ++.||.|+|||++++ ||++|++ +|+.|.+|.++ +|+||+++|.+|++|++++|
T Consensus 166 ~d~gl~~~il~~G~G~~~~~~gd~V~i~y~g~~-dG~~fd~-----~~~~f~lG~g~~~~~i~G~e~~l~gmk~Ge~~~v 239 (280)
T 1q1c_A 166 EDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYY-KDKLFDQ-----RELRFEIGEGENLDLPYGLERAIQRMEKGEHSIV 239 (280)
T ss_dssp CSSSEEEEEEECCSCSCCCCTTCEEEEEEEEEE-TTEEEEE-----EEEEEETTCGGGGTCCHHHHHHHTTCCTTCEEEE
T ss_pred cccceeEEeeecccccccccCCceEEEEEEEEe-CCEEEec-----CCeEEEecCCcccccchhHHHHHhCCCCCcEEEE
Confidence 56899999999999984 899999999999998 9999997 48999999987 59999999999999999999
Q ss_pred EEcCCCCCCCCCCCC-CCCCCC
Q 031721 132 YIPGPVISNTLLILH-NWEEKT 152 (154)
Q Consensus 132 ~ip~~~~yg~~~~~~-~~~~~~ 152 (154)
.||++++||+.+... .|+||.
T Consensus 240 ~ip~~~~yG~~~~~~~~IP~~~ 261 (280)
T 1q1c_A 240 YLKPSYAFGSVGKEKFQIPPNA 261 (280)
T ss_dssp EECGGGTTTTTCBGGGTBCTTC
T ss_pred EEChhHcCCcCCCccCccCCCC
Confidence 999999999877543 577774
No 33
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=99.74 E-value=1.4e-17 Score=118.42 Aligned_cols=72 Identities=19% Similarity=0.316 Sum_probs=67.0
Q ss_pred CCCCCCCEEEEEEEEEeC-CCcEEEccCCCCccEEEEeCCCccchHHHHHhcCCCcccEEEEEEcCCCCCCCCC
Q 031721 71 PSPPVGFQVAANYVAMIP-SGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGKRRLYIPGPVISNTLL 143 (154)
Q Consensus 71 ~~~~~gd~V~v~y~~~~~-~g~~~dss~~~~~p~~f~lG~~~~i~g~~~al~~mk~Ge~~~i~ip~~~~yg~~~ 143 (154)
..++.||.|++||++++. ||++||+|+.. .|+.|.+|.+++++||+++|.+|++|++++|.|||+++||+.+
T Consensus 5 ~~i~~gd~V~v~Y~g~~~~dG~~fdss~~~-~p~~f~~G~g~vipg~e~aL~gm~~Ge~~~v~ipp~~aYG~~~ 77 (151)
T 2kr7_A 5 DLESIKQAALIEYEVREQGSSIVLDSNISK-EPLEFIIGTNQIIAGLEKAVLKAQIGEWEEVVIAPEEAYGVYE 77 (151)
T ss_dssp CCTTSCCEEEEEEEEEESSCSCEEEESTTT-CCEEEETTCCCSCHHHHHHHTTCCBTCEEEEEECGGGTTCSSC
T ss_pred cCCCCCCEEEEEEEEEECCCCCEEEeCCCC-cCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEecHHHcCCCC
Confidence 358899999999999987 99999999763 7999999999999999999999999999999999999999865
No 34
>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A
Probab=99.72 E-value=8.8e-18 Score=126.70 Aligned_cols=70 Identities=31% Similarity=0.473 Sum_probs=65.4
Q ss_pred CCCCCEEEEEEEEEeCCCcEEEccCCC-------------CccEEEEeCCCccchHHHHHhcCCCcccEEEEEEcCCCCC
Q 031721 73 PPVGFQVAANYVAMIPSGQIFDSSLEK-------------GRPYIFRVGSGQVVKGLDEGILTMKTGGKRRLYIPGPVIS 139 (154)
Q Consensus 73 ~~~gd~V~v~y~~~~~~g~~~dss~~~-------------~~p~~f~lG~~~~i~g~~~al~~mk~Ge~~~i~ip~~~~y 139 (154)
++.||.|++||++++ ||++||+|+.. +.|+.|.+|.+++|+||+++|.+|++|++++|.|||++||
T Consensus 2 i~~Gd~V~v~Y~g~l-dG~vfDss~~~~A~e~gi~~~~~~~~P~~f~lG~g~vIpG~eeaL~Gm~vGek~~v~Ippe~AY 80 (231)
T 3prb_A 2 VEKGKMVKISYDGYV-DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEKAF 80 (231)
T ss_dssp CCTTCEEEEEEEEEE-TTEEEEESCHHHHHHTTCCCTTSCCSCEEEETTSSSSCHHHHHHHHTCCTTCEEEEEECGGGTT
T ss_pred CCCCCEEEEEEEEEE-CCEEEEeccchhcccccccccccCCCCEEEEeCCCcHHHHHHHHHcCCCCCCEEEEEeCcHHhc
Confidence 678999999999999 99999999752 3799999999999999999999999999999999999999
Q ss_pred CCCC
Q 031721 140 NTLL 143 (154)
Q Consensus 140 g~~~ 143 (154)
|+.+
T Consensus 81 Ge~~ 84 (231)
T 3prb_A 81 GKRD 84 (231)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 9865
No 35
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=99.72 E-value=2.6e-17 Score=119.13 Aligned_cols=70 Identities=17% Similarity=0.231 Sum_probs=66.0
Q ss_pred CCCCCEEEEEEEEEeCCCcEEEccCCCCccEEEEeCCCccchHHHHHhcCCCcccEEEEEEcCCCCCCCCC
Q 031721 73 PPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGKRRLYIPGPVISNTLL 143 (154)
Q Consensus 73 ~~~gd~V~v~y~~~~~~g~~~dss~~~~~p~~f~lG~~~~i~g~~~al~~mk~Ge~~~i~ip~~~~yg~~~ 143 (154)
++.||.|++||++++.||++|++++.+ +|+.|.+|.+++||||+++|.+|++|++++|.|||+++||+.+
T Consensus 3 i~~gd~V~v~Y~g~~~dG~~fdss~~~-~P~~f~lG~g~vipG~eeaL~Gm~~Ge~~~v~ippe~aYG~~~ 72 (171)
T 2k8i_A 3 VAKDLVVSLAYQVRTEDGVLVDESPVS-APLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYD 72 (171)
T ss_dssp CCTTEEEEEEEEEEETTSCEEEECCSS-SCEEEETTSCSSCSHHHHHHTTCCTTCEEEEEEETTTSSCCCC
T ss_pred CCCCCEEEEEEEEEECCCCEEeeccCC-cCEEEEECCCCcchHHHHHHcCCCCCCEEEEEECcHHhcCCCC
Confidence 688999999999998899999999764 7999999999999999999999999999999999999999864
No 36
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=99.72 E-value=2.6e-17 Score=121.46 Aligned_cols=71 Identities=17% Similarity=0.229 Sum_probs=66.4
Q ss_pred CCCCCCEEEEEEEEEeCCCcEEEccCCCCccEEEEeCCCccchHHHHHhcCCCcccEEEEEEcCCCCCCCCC
Q 031721 72 SPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGKRRLYIPGPVISNTLL 143 (154)
Q Consensus 72 ~~~~gd~V~v~y~~~~~~g~~~dss~~~~~p~~f~lG~~~~i~g~~~al~~mk~Ge~~~i~ip~~~~yg~~~ 143 (154)
++++||.|+|||++++.||++||+|+.+ +|+.|.+|.+++||+|+++|.+|++|++++|.|||+++||+.+
T Consensus 2 ~i~~gd~V~v~Y~g~~~dG~~fdss~~~-~P~~f~lG~g~vipG~eeaL~Gm~vGe~~~v~Ippe~aYGe~~ 72 (196)
T 2kfw_A 2 KVAKDLVVSLAYQVRTEDGVLVDESPVS-APLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYD 72 (196)
T ss_dssp CCCSSCEEEEEEEEEETTTEEEEECCTT-SCCEEESSSSSSCHHHHHHHSSSCTTCEEEEECSTTTTSSCCC
T ss_pred CCCCCCEEEEEEEEEECCCCEEEecCCC-CCEEEEECCCCcchHHHHHHcCCCCCCEEEEEeCcHHhcCCCC
Confidence 3789999999999998899999999764 7999999999999999999999999999999999999999764
No 37
>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1
Probab=99.71 E-value=1.3e-17 Score=113.12 Aligned_cols=73 Identities=18% Similarity=0.339 Sum_probs=63.5
Q ss_pred CCCCCCCCCEEEEEEEEEeCCCcEEEccCCCCccEEEEeCCCccchHHHHHhcCCCcccEEEEEEcCCCCCCCCCC
Q 031721 69 QGPSPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGKRRLYIPGPVISNTLLI 144 (154)
Q Consensus 69 ~G~~~~~gd~V~v~y~~~~~~g~~~dss~~~~~p~~f~lG~~~~i~g~~~al~~mk~Ge~~~i~ip~~~~yg~~~~ 144 (154)
++..++.||.|+|||++++ ||++||+++ ++|+.|.+|.+++||||+++|.+|++|++++|.||+...||+.+.
T Consensus 26 ~~~~~~~gD~V~v~Y~g~~-dG~~fdss~--~~p~~f~lG~g~vi~G~ee~L~Gmk~Ge~~~v~i~fP~~Yg~~~~ 98 (113)
T 1hxv_A 26 SDKKLANGDIAIIDFTGIV-DNKKLASAS--AQNYELTIGSNSFIKGFETGLIAMKVNQKKTLALTFPSDYHVKEL 98 (113)
T ss_dssp ---CCCSSEEEEEEEEEEE-TTEECSTTC--CSEEEEEETSSCSCTTHHHHHHTSCSSEEEEECCCCCTTSSSSGG
T ss_pred CCCCCCCCCEEEEEEEEEE-CCEEcccCC--ccCEEEEECCCChhHHHHHHHCCCCCCCEEEEEEeCchhhCcCCC
Confidence 3557999999999999998 999999994 579999999999999999999999999999999973344997754
No 38
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=99.64 E-value=3e-16 Score=112.26 Aligned_cols=65 Identities=15% Similarity=0.208 Sum_probs=61.8
Q ss_pred CCCCCEEEEEEEEEeCCCcEEEccCCCCccEEEEeCCCccchHHHHHhcCCCcccEEEEEEcCCCCCCCCC
Q 031721 73 PPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGKRRLYIPGPVISNTLL 143 (154)
Q Consensus 73 ~~~gd~V~v~y~~~~~~g~~~dss~~~~~p~~f~lG~~~~i~g~~~al~~mk~Ge~~~i~ip~~~~yg~~~ 143 (154)
++.||.|++||+++ .||++||+++ +.|.+|.++++|||+++|.+|++|++++|.|||+++||+.+
T Consensus 3 i~~gd~V~v~Y~g~-~dG~~fdss~-----~~f~~G~g~vipG~e~aL~Gm~~Ge~~~v~ipp~~aYG~~~ 67 (158)
T 3cgm_A 3 VGQDKVVTIRYTLQ-VEGEVLDQGE-----LSYLHGHRNLIPGLEEALEGREEGEAFQAHVPAEKAYGPHD 67 (158)
T ss_dssp CCTTEEEEEEEEEE-ETTEEEEEEE-----EEEETTSSSSCHHHHHHHTTCBTTCEEEEEECGGGTTCCCC
T ss_pred CCCCCEEEEEEEEE-ECCEEEEeeE-----EEEEECCCCcChHHHHHHcCCCCCCEEEEEECcHHHcCCCC
Confidence 67899999999999 8999999985 99999999999999999999999999999999999999865
No 39
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.62 E-value=3.3e-15 Score=117.56 Aligned_cols=93 Identities=18% Similarity=0.310 Sum_probs=81.9
Q ss_pred ceecCCceEEEEEecCCCC-CCCCCCEEEEEEEEEeCCCcEEEccCCCCccEEEEeCCCc---cchHHHHHhcCCCcccE
Q 031721 53 MVTTESGLQYKDIKVGQGP-SPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQ---VVKGLDEGILTMKTGGK 128 (154)
Q Consensus 53 ~~~~~~g~~~~~~~~G~G~-~~~~gd~V~v~y~~~~~~g~~~dss~~~~~p~~f~lG~~~---~i~g~~~al~~mk~Ge~ 128 (154)
.++.++||.++++++|+|. .|..||.|+|||++++ +|.+||++ |+.|.+|.|. ++++|++++..|++|++
T Consensus 20 ~~~~~~~~~~~~~~~g~g~~~p~~~~~v~v~y~g~~-~g~~fd~~-----~~~f~lG~g~~~~~~~~~e~al~~~~~Ge~ 93 (336)
T 1p5q_A 20 HMEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYY-KDKLFDQR-----ELRFEIGEGENLDLPYGLERAIQRMEKGEH 93 (336)
T ss_dssp --CCTTSEEEEEEECCCCSCCCCTTCEEEEEEEEEE-TTEEEEEE-----EEEEETTCGGGGTCCHHHHHHHTTCCTTCE
T ss_pred eecCCCcEEEEEEeCCCCCCCCCCCCeEEEEEEEEE-CCEEEecC-----CeEEEeCCCCccccchHHHHHHhcCCCCCe
Confidence 3567899999999999998 5999999999999998 99999986 8999999876 58999999999999999
Q ss_pred EEEEEcCCCCCCCCCCCC-CCCCC
Q 031721 129 RRLYIPGPVISNTLLILH-NWEEK 151 (154)
Q Consensus 129 ~~i~ip~~~~yg~~~~~~-~~~~~ 151 (154)
+.|.|||.++||..+... .|.++
T Consensus 94 ~~l~i~p~~ayg~~g~~~~~i~~~ 117 (336)
T 1p5q_A 94 SIVYLKPSYAFGSVGKEKFQIPPN 117 (336)
T ss_dssp EEEEECTTTTTTTTCBGGGTBCSS
T ss_pred EEEEECCccccCcCCCCccCCCCC
Confidence 999999999999887554 45554
No 40
>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5
Probab=99.43 E-value=2.3e-13 Score=111.25 Aligned_cols=74 Identities=15% Similarity=0.328 Sum_probs=67.6
Q ss_pred CCCCCCCCEEEEEEEEEeCCCcEEEccCCCCccEEEEeCCCccchHHHHHhcCCCcccEEEEEEcCCCCCCCCCCCC
Q 031721 70 GPSPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGKRRLYIPGPVISNTLLILH 146 (154)
Q Consensus 70 G~~~~~gd~V~v~y~~~~~~g~~~dss~~~~~p~~f~lG~~~~i~g~~~al~~mk~Ge~~~i~ip~~~~yg~~~~~~ 146 (154)
+..++.||.|++||+++. ||+.|++++ +.|+.|.+|.+++||||+++|.||++|+++.|.||++.+||..+..+
T Consensus 155 ~~~~~~gD~V~i~y~g~~-dG~~fd~~~--~~~~~~~lG~g~~ipgfee~L~G~k~Ge~~~v~v~~~~~yg~~~lag 228 (432)
T 1w26_A 155 DGAVEAEDRVTIDFTGSV-DGEEFEGGK--ASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENLKG 228 (432)
T ss_dssp SSCCCTTCEEEECEEEES-SSCBCSSCC--CSSEEEETTSCCSCTTHHHHSSSCCSSCEEEEEEECCTTCSCTTTSS
T ss_pred CCCCCCCCEEEEEEEEee-CCeEccCCC--ccceEEEeCCCCcchHHHHHhCCCCCCCEEEEEECCchhhCCCCCCC
Confidence 456899999999999995 999999986 57999999999999999999999999999999999999999876543
No 41
>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A
Probab=99.28 E-value=1.9e-12 Score=104.56 Aligned_cols=74 Identities=19% Similarity=0.362 Sum_probs=65.8
Q ss_pred CCCCCCCCEEEEEEEEEeCCCcEEEccCCCCccEEEEeCCCccchHHHHHhcCCCcccEEEEEEcCCCCCCCCCCCC
Q 031721 70 GPSPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGKRRLYIPGPVISNTLLILH 146 (154)
Q Consensus 70 G~~~~~gd~V~v~y~~~~~~g~~~dss~~~~~p~~f~lG~~~~i~g~~~al~~mk~Ge~~~i~ip~~~~yg~~~~~~ 146 (154)
+..++.||.|++||+++. ||+.|+++ .+.|+.|.+|.+++||||+++|.||++|+++.|.||+...|+.....+
T Consensus 158 ~~~~~~gD~V~i~y~g~~-dG~~fd~~--~~~~~~~~lG~g~~ipgfee~L~Gmk~Ge~~~v~v~fp~dy~~~~laG 231 (392)
T 1t11_A 158 DEAAENGKRVSIDFVGSI-DGVEFEGG--KAENFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVTFPEDYHAENLKG 231 (392)
T ss_dssp SCCCCTTCEEEEEEEEES-SSSCCTTC--EEEEEEEETTSCCBSTTSGGGTTTCCSSCCCCEEEECCTTCSCTTTSS
T ss_pred CCCCCCCCEEEEEEEEEE-CCEEccCC--CccceEEEecCCCcchhHHHHhCCCCCCCEEEEEEeCccccccCCCCC
Confidence 446899999999999995 99999988 457999999999999999999999999999999998778899765543
No 42
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.26 E-value=2.6e-11 Score=98.97 Aligned_cols=90 Identities=22% Similarity=0.331 Sum_probs=77.2
Q ss_pred cCCceEEEEEecCCCCC-CCCCCEEEEEEEEEeCCCcEEEccCCCCccEEEEeCCC---ccchHHHHHhcCCCcccEEEE
Q 031721 56 TESGLQYKDIKVGQGPS-PPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSG---QVVKGLDEGILTMKTGGKRRL 131 (154)
Q Consensus 56 ~~~g~~~~~~~~G~G~~-~~~gd~V~v~y~~~~~~g~~~dss~~~~~p~~f~lG~~---~~i~g~~~al~~mk~Ge~~~i 131 (154)
.+.++.++++++|.|.. |..||.|.|||++++ +|.+|+++ ++.|.+|.| .++++|++|+..|++|+++.|
T Consensus 144 ~dg~~~k~i~~~g~~~~~p~~g~~V~v~y~g~~-~g~~f~~~-----~~~f~~g~g~~~~v~~~~e~al~~~~~ge~~~l 217 (457)
T 1kt0_A 144 EDGGIIRRTKRKGEGYSNPNEGATVEIHLEGRC-GGRMFDCR-----DVAFTVGEGEDHDIPIGIDKALEKMQREEQCIL 217 (457)
T ss_dssp SSSSEEEEEEECCBCSCCCCTTCEEEEEEEEEE-TTEEEEEE-----EEEEETTCGGGGTCCHHHHHHHTTCCBTCEEEE
T ss_pred CCcceEEEEEecCCCCCCCCCCCEEEEEEEEEe-CCeEEecC-----ceEEEeCCCccccCChHHHHHHHhCCCCCEEEE
Confidence 45688899999998864 999999999999998 99999973 699999966 489999999999999999999
Q ss_pred EEcCCCCCCCCCCCC-CCCCC
Q 031721 132 YIPGPVISNTLLILH-NWEEK 151 (154)
Q Consensus 132 ~ip~~~~yg~~~~~~-~~~~~ 151 (154)
.++|.++|+..+... .|.|+
T Consensus 218 ~i~P~~ay~~~g~~~~~ip~~ 238 (457)
T 1kt0_A 218 YLGPRYGFGEAGKPKFGIEPN 238 (457)
T ss_dssp EECGGGTTCSSCBGGGTBCTT
T ss_pred EECcccccCCCCCcccCCCCC
Confidence 999999999877432 45544
No 43
>3gty_X Trigger factor, TF; chaperone-client complex, cell cycle, cell division, chapero isomerase, rotamase, ribonucleoprotein, binding; 3.40A {Thermotoga maritima} PDB: 3gu0_A
Probab=98.01 E-value=5.1e-06 Score=67.77 Aligned_cols=58 Identities=12% Similarity=0.061 Sum_probs=50.0
Q ss_pred CCCCCCEEEEEEEEEeCCCcEEEccCCCCccEEEEeCCCccchHHHHHhcCCCcccEEEEEEcC
Q 031721 72 SPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILTMKTGGKRRLYIPG 135 (154)
Q Consensus 72 ~~~~gd~V~v~y~~~~~~g~~~dss~~~~~p~~f~lG~~~~i~g~~~al~~mk~Ge~~~i~ip~ 135 (154)
.++.||.|++||+++ .||..|+++ .+.++.+.+|.+. + |+++|.||++|+++.|.+..
T Consensus 154 ~a~~gD~V~id~~~~-~dG~~~~~~--~~~~~~l~~g~~~--~-fe~~liG~k~Ge~~~~~vtF 211 (433)
T 3gty_X 154 PAEAGDLVRVNMEVY-NEEGKKLTS--REYEYVISEDEDR--P-FVKDLVGKKKGDVVEIEREY 211 (433)
T ss_dssp CCCTTSEEEEEEEEE-CTTSCEEEE--EEEEEECCSSCCC--T-THHHHTTCCTTCEEEEEEEE
T ss_pred ccCCCCEEEEEEEEE-ECCEECcCC--CCCCeEEEecCCc--h-HHHHhCCCCCCceEEEEEee
Confidence 478999999999998 599999986 3467888888876 4 99999999999999998854
No 44
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=80.49 E-value=0.35 Score=37.81 Aligned_cols=15 Identities=7% Similarity=0.120 Sum_probs=12.4
Q ss_pred CCCCCEEEEEEEEEe
Q 031721 73 PPVGFQVAANYVAMI 87 (154)
Q Consensus 73 ~~~gd~V~v~y~~~~ 87 (154)
++.||.|.|++.-..
T Consensus 81 v~~Gd~v~v~~~N~l 95 (343)
T 3cg8_A 81 VNEGDTLHIEFTNTM 95 (343)
T ss_dssp EETTCEEEEEEEECS
T ss_pred EECCCEEEEEEEECC
Confidence 578999999998765
No 45
>2pq4_B Periplasmic nitrate reductase precursor; NAPD/NAPA1-35, mixed beta-alpha sandwich structure, protein- peptide complex, alpha-helix; NMR {Escherichia coli}
Probab=60.48 E-value=7.5 Score=19.90 Aligned_cols=17 Identities=24% Similarity=0.321 Sum_probs=10.3
Q ss_pred CcchhHHHHHHHHHHHHH
Q 031721 1 MNLVSRRDLIGLVLGVST 18 (154)
Q Consensus 1 m~~~~r~~~l~~~l~~~a 18 (154)
|+ +.||.+|....+.++
T Consensus 1 M~-lsRR~FLK~~aaa~A 17 (35)
T 2pq4_B 1 MK-LSRRSFMKANAVAAA 17 (35)
T ss_dssp CC-CCSHHHHHHHHHHHH
T ss_pred CC-CcHHHHHHHHHHHHH
Confidence 55 678888875444333
No 46
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=56.24 E-value=18 Score=32.16 Aligned_cols=61 Identities=20% Similarity=0.281 Sum_probs=45.0
Q ss_pred CCCCCEEEEEEEEEeC-CCcE-EE---------------ccC-----------CCCccEEEEeCCCccchHHHHHhcCCC
Q 031721 73 PPVGFQVAANYVAMIP-SGQI-FD---------------SSL-----------EKGRPYIFRVGSGQVVKGLDEGILTMK 124 (154)
Q Consensus 73 ~~~gd~V~v~y~~~~~-~g~~-~d---------------ss~-----------~~~~p~~f~lG~~~~i~g~~~al~~mk 124 (154)
+..|+.|.|.|+..+. +|+. -+ +.| +....+.|.+|.+.+.+-++-.|..|.
T Consensus 561 i~~gs~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ies~~e~~fe~g~g~~~~~le~vV~qms 640 (950)
T 3htx_A 561 ITNGSVVSICYSLSLAVDPEYSSDGESPREDNESNEEMESEYSANCESSVEPIESNEEIEFEVGTGSMNPHIESEVTQMT 640 (950)
T ss_dssp CCTTEEEEEEEEEEEEECC----------------------------CCCEEEEEEEEEEEEETTTCBCHHHHHHHTTCC
T ss_pred cCCCcEEEEEEEEEEEecCcccccccccccccccccccccccccchhhhhhcccccHHHHHHHhcCCccchhhheeeecc
Confidence 6899999999999872 2211 01 111 112578999999999999999999999
Q ss_pred cccEEEEEE
Q 031721 125 TGGKRRLYI 133 (154)
Q Consensus 125 ~Ge~~~i~i 133 (154)
+|+...|..
T Consensus 641 ~gqT~~F~~ 649 (950)
T 3htx_A 641 VGEYASFKM 649 (950)
T ss_dssp TTCEEEEEE
T ss_pred ccceeEEec
Confidence 999987773
No 47
>3ucp_A UNDA; beta-barrel, C-type cytochrome, electron transport, C-type H cell surface, transport protein; HET: HEC; 1.76A {Shewanella SP} PDB: 3ufh_A* 3ufk_A*
Probab=56.14 E-value=9.6 Score=32.07 Aligned_cols=18 Identities=17% Similarity=0.171 Sum_probs=14.9
Q ss_pred EEEEEEEEEeCCCcEEEc
Q 031721 78 QVAANYVAMIPSGQIFDS 95 (154)
Q Consensus 78 ~V~v~y~~~~~~g~~~ds 95 (154)
.++|.|++.+.+|..+..
T Consensus 67 ~~~v~f~~~n~~g~~v~g 84 (874)
T 3ucp_A 67 TVSVDIVLTNANGVPVTG 84 (874)
T ss_dssp EEEEEEEEECTTCCBEEC
T ss_pred cEEEEEEEECCCCCeeec
Confidence 689999999988887753
No 48
>2voz_A FUTA2, periplasmic iron-binding protein; ferric binding protein, metal-binding protein, TAT; 1.70A {Synechocystis SP} PDB: 2vp1_A*
Probab=54.04 E-value=2.7 Score=31.72 Aligned_cols=24 Identities=21% Similarity=0.346 Sum_probs=0.0
Q ss_pred Ccc-hhHHHHHHHHHHHHHhhhccc
Q 031721 1 MNL-VSRRDLIGLVLGVSTLILDSF 24 (154)
Q Consensus 1 m~~-~~r~~~l~~~l~~~a~~l~~~ 24 (154)
|.. |+||+++.++++++++++++|
T Consensus 1 m~~~~~rr~~l~~~~a~~~~~~~~c 25 (346)
T 2voz_A 1 MTTKISRRTFFVGGTALTALVVANL 25 (346)
T ss_dssp -------------------------
T ss_pred CCccchHHHHHHHHHHHHHHHHhcC
Confidence 554 777877765444333333333
No 49
>2p4v_A Transcription elongation factor GREB; transcript cleavage, GRE-factors, RNA polymerase; 2.60A {Escherichia coli}
Probab=47.66 E-value=26 Score=24.04 Aligned_cols=26 Identities=12% Similarity=0.224 Sum_probs=21.7
Q ss_pred ccchHHHHHhcCCCcccEEEEEEcCC
Q 031721 111 QVVKGLDEGILTMKTGGKRRLYIPGP 136 (154)
Q Consensus 111 ~~i~g~~~al~~mk~Ge~~~i~ip~~ 136 (154)
++..-+-.||.|.++|+...+..|..
T Consensus 119 S~~SPlg~ALlGk~vGD~v~v~~P~G 144 (158)
T 2p4v_A 119 SIDSPMARALLKKEVGDLAVVNTPAG 144 (158)
T ss_dssp CTTSHHHHHSTTCCTTCEEEEECSSC
T ss_pred cCCCHHHHHhcCCCCCCEEEEEcCCC
Confidence 34467999999999999999998853
No 50
>2f23_A Anti-cleavage anti-GREA transcription factor GFH1; anti-GREA GFH1 thermus thermophilus; 1.60A {Thermus thermophilus} SCOP: a.2.1.1 d.26.1.2 PDB: 2eul_A 3aoh_X* 3aoi_X* 2etn_A
Probab=46.61 E-value=22 Score=24.27 Aligned_cols=24 Identities=17% Similarity=0.239 Sum_probs=20.8
Q ss_pred cchHHHHHhcCCCcccEEEEEEcC
Q 031721 112 VVKGLDEGILTMKTGGKRRLYIPG 135 (154)
Q Consensus 112 ~i~g~~~al~~mk~Ge~~~i~ip~ 135 (154)
+..-+-.||.|.++|+...+..|.
T Consensus 121 ~~SPlG~ALlGk~~GD~v~~~~p~ 144 (156)
T 2f23_A 121 DASPMGKALLGHRVGDVLSLDTPK 144 (156)
T ss_dssp TTSHHHHHHTTCCTTCEEEEEETT
T ss_pred CCCHHHHHHcCCCCCCEEEEEcCC
Confidence 345788999999999999999885
No 51
>2vda_B Maltoporin; sugar transport, protein transport, protein targeting, transmembrane, outer membrane, signal peptide; NMR {Escherichia coli}
Probab=44.33 E-value=2.3 Score=20.10 Aligned_cols=22 Identities=18% Similarity=0.327 Sum_probs=11.4
Q ss_pred CcchhHHHHHHHHHHHHHhhhc
Q 031721 1 MNLVSRRDLIGLVLGVSTLILD 22 (154)
Q Consensus 1 m~~~~r~~~l~~~l~~~a~~l~ 22 (154)
|.+.|+|+-|-++.++.+...+
T Consensus 2 mitlrkrrklplavav~agv~~ 23 (28)
T 2vda_B 2 MITLRKRRKLPLAVAVAAGVMS 23 (28)
T ss_dssp CCCCCCCCCCTHHHHHHHHTTC
T ss_pred eEEeeccccCchHHHHHHHHhH
Confidence 5555555544444555555543
No 52
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis}
Probab=43.33 E-value=75 Score=23.11 Aligned_cols=52 Identities=23% Similarity=0.287 Sum_probs=36.9
Q ss_pred CCCCCCCCEEEEEEEEEeCCCcEEEccCCCCccEEEEeCCC---------ccchHHHHHhcCCCcccE
Q 031721 70 GPSPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSG---------QVVKGLDEGILTMKTGGK 128 (154)
Q Consensus 70 G~~~~~gd~V~v~y~~~~~~g~~~dss~~~~~p~~f~lG~~---------~~i~g~~~al~~mk~Ge~ 128 (154)
...++.||.|.+++-... +|-.-|.+ .+|.+|.. .+..+++.++..+|+|-+
T Consensus 82 ~~~l~~Gdlv~iD~g~~~-~GY~sD~t------RT~~vG~~~~~~~~l~~~v~~a~~~~i~~~kpG~~ 142 (264)
T 3tb5_A 82 KKVLKDGDLIKVDMCVDL-KGAISDSC------WSYVVGESTPEIDRLMEVTKKALYLGIEQAQVGNR 142 (264)
T ss_dssp SCBCCTTCEEEEEEEEEE-TTEEEEEE------EEEECSSCCHHHHHHHHHHHHHHHHHHHTCCTTCB
T ss_pred CccccCCCEEEEecccee-cceeeecc------cccccCCccHHHHHHHHHHHHHHHHHHhhhCCCCC
Confidence 345899999999998775 77655554 56677743 134567777888888754
No 53
>2lkt_A Retinoic acid receptor responder protein 3; TIG3, human tumor suppressor II family, NLPC/P60, hydrolase; NMR {Homo sapiens}
Probab=39.89 E-value=32 Score=22.30 Aligned_cols=24 Identities=17% Similarity=0.339 Sum_probs=17.1
Q ss_pred CCCCCCCEEEE------EEEEEeCCCcEEE
Q 031721 71 PSPPVGFQVAA------NYVAMIPSGQIFD 94 (154)
Q Consensus 71 ~~~~~gd~V~v------~y~~~~~~g~~~d 94 (154)
.+|++||.+.+ ||-+|..||.++-
T Consensus 6 ~ep~pGDlI~~~r~~Y~H~gIYvGdg~ViH 35 (125)
T 2lkt_A 6 QEPKPGDLIEIFRLGYEHWALYIGDGYVIH 35 (125)
T ss_dssp CCCCTTCEEEEECSSSCEEEEEEETTEEEE
T ss_pred CCCCCCCEEEEeCCCccEEEEEeCCCeEEE
Confidence 45788888776 6777777777753
No 54
>4gd5_A Phosphate ABC transporter, phosphate-binding PROT; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE; 1.70A {Clostridium perfringens}
Probab=39.32 E-value=6.2 Score=29.19 Aligned_cols=14 Identities=21% Similarity=0.368 Sum_probs=0.0
Q ss_pred cchhHHHHHHHHHH
Q 031721 2 NLVSRRDLIGLVLG 15 (154)
Q Consensus 2 ~~~~r~~~l~~~l~ 15 (154)
++|.||+++.++++
T Consensus 2 ~~M~kk~~~~~~~~ 15 (279)
T 4gd5_A 2 NAMFKKRLIAIIGT 15 (279)
T ss_dssp --------------
T ss_pred CccHHHHHHHHHHH
Confidence 45666666554433
No 55
>4edp_A ABC transporter, substrate-binding protein; clostridium PERF ATCC 13124, center for structural genomics of infectious DI csgid; 1.85A {Clostridium perfringens}
Probab=36.00 E-value=7.6 Score=28.94 Aligned_cols=23 Identities=17% Similarity=0.186 Sum_probs=0.0
Q ss_pred chhHHHHHHHHHHHH-Hhhhcccc
Q 031721 3 LVSRRDLIGLVLGVS-TLILDSFD 25 (154)
Q Consensus 3 ~~~r~~~l~~~l~~~-a~~l~~~~ 25 (154)
.|+||.+++++++++ ++++++|.
T Consensus 3 ~Mkk~~~~~~~~~~~~~~~lagC~ 26 (351)
T 4edp_A 3 AMKKKILATLLTGLVLGTSLVGCG 26 (351)
T ss_dssp ------------------------
T ss_pred hHHHHHHHHHHHHHHHHHHhheeC
Confidence 467776554433332 22444444
No 56
>2lj4_A Peptidyl-prolyl CIS-trans isomerase/rotamase, PUT; tbpin1; NMR {Trypanosoma brucei}
Probab=34.51 E-value=22 Score=22.95 Aligned_cols=22 Identities=23% Similarity=0.510 Sum_probs=19.0
Q ss_pred CCccchHHHHHhcCCCcccEEE
Q 031721 109 SGQVVKGLDEGILTMKTGGKRR 130 (154)
Q Consensus 109 ~~~~i~g~~~al~~mk~Ge~~~ 130 (154)
.+++.+.|++++..|++|+--.
T Consensus 79 ~~~~~~~f~~a~~~l~~GeiS~ 100 (115)
T 2lj4_A 79 SGEMMKPFEDAVRALKIGDISP 100 (115)
T ss_dssp TTSSCHHHHHHHTTSCBTCBCC
T ss_pred CCCCCchHHHHHhcCCCCCCCC
Confidence 4589999999999999998654
No 57
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A
Probab=33.93 E-value=97 Score=23.20 Aligned_cols=51 Identities=22% Similarity=0.236 Sum_probs=34.8
Q ss_pred CCCCCCCEEEEEEEEEeCCCcEEEccCCCCccEEEEeCCC------ccchHHHHHhcCCCcccE
Q 031721 71 PSPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSG------QVVKGLDEGILTMKTGGK 128 (154)
Q Consensus 71 ~~~~~gd~V~v~y~~~~~~g~~~dss~~~~~p~~f~lG~~------~~i~g~~~al~~mk~Ge~ 128 (154)
..+++||.|.+++-... +|-.-|.+ .+|.+|.. .+..+++.++..+++|-+
T Consensus 71 ~~L~~GDiv~iD~G~~~-~GY~sD~t------RT~~vG~~~~~l~~~~~~a~~~~i~~~kpG~~ 127 (295)
T 1xgs_A 71 TVLKEGDYLKIDVGVHI-DGFIADTA------VTVRVGMEEDELMEAAKEALNAAISVARAGVE 127 (295)
T ss_dssp CBCCTTCEEEEEEEEEE-TTEEEEEE------EEEETTSCCCHHHHHHHHHHHHHHHHCSTTCB
T ss_pred ccccCCCEEEEEEeEEE-CCEEEEEE------EEEEeCHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 45899999999998876 77666655 56777741 123556666666666643
No 58
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=33.76 E-value=8.7 Score=25.44 Aligned_cols=10 Identities=20% Similarity=-0.164 Sum_probs=7.5
Q ss_pred CCCCCEEEEE
Q 031721 73 PPVGFQVAAN 82 (154)
Q Consensus 73 ~~~gd~V~v~ 82 (154)
++.||.|++.
T Consensus 64 V~~GdtV~~~ 73 (132)
T 3c75_A 64 IKAGETVYWV 73 (132)
T ss_dssp ECTTCEEEEE
T ss_pred ECCCCEEEEE
Confidence 6788888764
No 59
>3tlk_A Ferrienterobactin-binding periplasmic protein; ferric-enterobactin, trimer, siderophore transport, periplas space, metal transport; HET: EB4; 1.85A {Escherichia coli}
Probab=33.49 E-value=11 Score=28.48 Aligned_cols=23 Identities=22% Similarity=0.203 Sum_probs=0.0
Q ss_pred hhHHHHHHHHHHHHHhhhccccc
Q 031721 4 VSRRDLIGLVLGVSTLILDSFDA 26 (154)
Q Consensus 4 ~~r~~~l~~~l~~~a~~l~~~~~ 26 (154)
||++.++.+++++++.+|+.|..
T Consensus 1 m~~~~~~~~~~l~~~~~l~gc~~ 23 (326)
T 3tlk_A 1 MRLAPLYRNALLLTGLLLSGIAA 23 (326)
T ss_dssp -----------------------
T ss_pred CcchHHHHHHHHHHHHHHhcccc
Confidence 55666666555455555555543
No 60
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A
Probab=32.86 E-value=1.4e+02 Score=21.64 Aligned_cols=52 Identities=21% Similarity=0.282 Sum_probs=35.7
Q ss_pred CCCCCCCCEEEEEEEEEeCCCcEEEccCCCCccEEEEeCCC---------ccchHHHHHhcCCCcccE
Q 031721 70 GPSPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSG---------QVVKGLDEGILTMKTGGK 128 (154)
Q Consensus 70 G~~~~~gd~V~v~y~~~~~~g~~~dss~~~~~p~~f~lG~~---------~~i~g~~~al~~mk~Ge~ 128 (154)
...++.||.|.+++-... +|-.-|.+ .+|.+|.. .+..+++.++..+|.|-+
T Consensus 86 ~~~l~~Gd~v~iD~G~~~-~GY~sD~t------RT~~vG~~~~~~~~~~~~v~~a~~~~i~~~kpG~~ 146 (262)
T 3mx6_A 86 DKPLKNGDIVNIDVTVIL-DGWYGDTS------RMYYVGDVAIKPKRLIQVTYDAMMKGIEVVRPGAK 146 (262)
T ss_dssp SCBCCTTCEEEEEEEEEE-TTEEEEEE------EEEECSSCCHHHHHHHHHHHHHHHHHHHTCSTTCB
T ss_pred CcccCCCCEEEEEeeEEE-CCEEEEEE------EEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 345899999999998875 77655554 56777732 134566777777777754
No 61
>2p5d_A UPF0310 protein mjecl36; NPPSFA, national project on protein structural and functional analyses; 1.70A {Methanocaldococcus jannaschii}
Probab=31.73 E-value=28 Score=23.58 Aligned_cols=27 Identities=22% Similarity=0.151 Sum_probs=19.5
Q ss_pred hHHHHHhcCCCcccEEEEEEcCCCCCCCC
Q 031721 114 KGLDEGILTMKTGGKRRLYIPGPVISNTL 142 (154)
Q Consensus 114 ~g~~~al~~mk~Ge~~~i~ip~~~~yg~~ 142 (154)
.+-..-|..||+||...|| |. ..|+++
T Consensus 29 ~~arn~lr~Mk~GD~~~fY-~~-~~~hs~ 55 (147)
T 2p5d_A 29 ERYKNTINKVKVGDKLIIY-EI-QRSGKD 55 (147)
T ss_dssp GGGHHHHTTCCTTCEEEEE-EC-CBCSTT
T ss_pred HHHHHHHHhCCCCCEEEEE-Ee-cccCCC
Confidence 3445667899999999999 44 445544
No 62
>4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei}
Probab=31.10 E-value=1.5e+02 Score=22.57 Aligned_cols=52 Identities=15% Similarity=0.065 Sum_probs=36.8
Q ss_pred CCCCCCCCEEEEEEEEEeCCCcEEEccCCCCccEEEEeCCC---------ccchHHHHHhcCCCcccE
Q 031721 70 GPSPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSG---------QVVKGLDEGILTMKTGGK 128 (154)
Q Consensus 70 G~~~~~gd~V~v~y~~~~~~g~~~dss~~~~~p~~f~lG~~---------~~i~g~~~al~~mk~Ge~ 128 (154)
...+++||.|.+++.... +|-.-|.+ .+|.+|.- .+..+++.++..+|.|-+
T Consensus 141 ~~~l~~GD~v~iD~g~~~-~GY~sD~t------RT~~vG~~~~~~~~l~~~v~ea~~~ai~~~kpG~~ 201 (337)
T 4fuk_A 141 SRELEEGDILNIDVSSYL-NGFHGDLN------ETVFIGRPDDDSVRLVHAAYECLCAGIGVVKPEAL 201 (337)
T ss_dssp SCBCCTTCEEEEEEEEEE-TTEEEEEE------EEEESSSCCHHHHHHHHHHHHHHHHHHTTCSTTCB
T ss_pred CccccCCCEEEEecceeE-CCEEEeee------eeEEeCCccHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 345899999999999886 77666655 56777742 134567777777777754
No 63
>1q90_R Cytochrome B6-F complex iron-sulfur subunit; membrane protein complex, photosynthesis, electron transfer, oxydoreductase, chlorophyll; HET: HEM CL1 BCR TDS SQD LFA LMG; 3.10A {Chlamydomonas reinhardtii} SCOP: f.23.12.1
Probab=29.02 E-value=43 Score=18.41 Aligned_cols=15 Identities=20% Similarity=0.501 Sum_probs=9.5
Q ss_pred chhHHHHHHHHHHHH
Q 031721 3 LVSRRDLIGLVLGVS 17 (154)
Q Consensus 3 ~~~r~~~l~~~l~~~ 17 (154)
.|.||.++-+++..+
T Consensus 8 dm~RRqfln~l~~G~ 22 (49)
T 1q90_R 8 DMNKRNIMNLILAGG 22 (49)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHH
Confidence 377888876654433
No 64
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A
Probab=28.39 E-value=1.8e+02 Score=21.48 Aligned_cols=52 Identities=23% Similarity=0.180 Sum_probs=36.2
Q ss_pred CCCCCCCCEEEEEEEEEeCCCcEEEccCCCCccEEEEeCCC---------ccchHHHHHhcCCCcccE
Q 031721 70 GPSPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSG---------QVVKGLDEGILTMKTGGK 128 (154)
Q Consensus 70 G~~~~~gd~V~v~y~~~~~~g~~~dss~~~~~p~~f~lG~~---------~~i~g~~~al~~mk~Ge~ 128 (154)
...++.||.|.+++-... +|-.-|.+ .+|.+|.. .+..+++.++..++.|-+
T Consensus 119 ~~~l~~Gd~v~iD~G~~~-~GY~sD~t------RT~~vG~~~~~~~~~~~~v~~a~~~~i~~~kpG~~ 179 (285)
T 3pka_A 119 STVITDGDIVNIDVTAYI-GGVHGDTN------ATFPAGDVADEHRLLVDRTREATMRAINTVKPGRA 179 (285)
T ss_dssp SCBCCTTCEEEEEEEEEE-TTEEEEEE------EEEECSSCCHHHHHHHHHHHHHHHHHHHTCCTTSB
T ss_pred CcccCCCCEEEEEEEEEE-CCEEEEEE------EEEEcCCCCHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 345899999999998875 77665654 56677732 134567777777777753
No 65
>2nw5_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3cmk_A* 3d0d_A* 3fm3_A 3fmq_A* 3fmr_A*
Probab=28.24 E-value=1.2e+02 Score=23.65 Aligned_cols=51 Identities=14% Similarity=0.210 Sum_probs=35.2
Q ss_pred CCCCCCCEEEEEEEEEeCCCcEEEccCCCCccEEEEeCCC------ccchHHHHHhcCCCcccE
Q 031721 71 PSPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSG------QVVKGLDEGILTMKTGGK 128 (154)
Q Consensus 71 ~~~~~gd~V~v~y~~~~~~g~~~dss~~~~~p~~f~lG~~------~~i~g~~~al~~mk~Ge~ 128 (154)
..++.||.|.|++-... +|-.-|.+ .+|.++.. .+..+++.++..++.|-+
T Consensus 121 ~~L~~GDlV~ID~G~~~-~GY~sD~t------RT~~v~~~~~~l~~av~eA~~aai~~~kPGv~ 177 (360)
T 2nw5_A 121 IVLKEDDVLKIDFGTHS-DGRIMDSA------FTVAFKENLEPLLVAAREGTETGIKSLGVDVR 177 (360)
T ss_dssp CBCCTTCEEEEEEEEEE-TTEEEEEE------EEEECCGGGHHHHHHHHHHHHHHHHHCCTTCB
T ss_pred cCcCCCCEEEEEEEEEE-CCEEEEEE------EEEEcCHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 45899999999998875 88766665 45555532 134567777777777754
No 66
>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A*
Probab=28.16 E-value=1.2e+02 Score=23.56 Aligned_cols=48 Identities=15% Similarity=0.257 Sum_probs=32.4
Q ss_pred CCCCCCEEEEEEEEEeCCCcEEEccCCCCccEEEEeCCC--cc----chHHHHHhcCCCcc
Q 031721 72 SPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSG--QV----VKGLDEGILTMKTG 126 (154)
Q Consensus 72 ~~~~gd~V~v~y~~~~~~g~~~dss~~~~~p~~f~lG~~--~~----i~g~~~al~~mk~G 126 (154)
..+.||.|.|++.... ||-.-|.+ .+|.+|.. .+ -.+++.++..++.|
T Consensus 120 ~L~~GDiV~ID~G~~~-dGY~sD~a------rT~~vg~~~~~l~~~~~~al~aai~~~~pG 173 (358)
T 3fm3_A 120 VLKEDDVLKIDFGTHS-DGRIMDSA------FTVAFKENLEPLLVAAREGTETGIKSLGVD 173 (358)
T ss_dssp BCCTTCEEEEEEEEEE-TTEEEEEE------EEEECCGGGHHHHHHHHHHHHHHHHHCCTT
T ss_pred EecCCCEEEEEeeEEE-CCEEEEEE------EeccccccchhHHHHHHHHHHHHHHhhhcC
Confidence 3899999999998886 88776765 56777742 11 23455555555555
No 67
>3omb_A Extracellular solute-binding protein, family 1; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG; 2.10A {Bifidobacterium longum subsp}
Probab=28.14 E-value=16 Score=29.45 Aligned_cols=11 Identities=9% Similarity=-0.179 Sum_probs=0.0
Q ss_pred CcchhHHHHHH
Q 031721 1 MNLVSRRDLIG 11 (154)
Q Consensus 1 m~~~~r~~~l~ 11 (154)
|+++++|.+++
T Consensus 2 M~r~~~kk~~~ 12 (535)
T 3omb_A 2 MRRQTMVKAGA 12 (535)
T ss_dssp -----------
T ss_pred cchhhHHHHHH
Confidence 55444444443
No 68
>3bmb_A Regulator of nucleoside diphosphate kinase; RNA polymerase, elongation factor, anti-GRE factor, RNA binding protein; 1.91A {Escherichia coli}
Probab=28.08 E-value=45 Score=22.10 Aligned_cols=25 Identities=20% Similarity=0.449 Sum_probs=21.2
Q ss_pred cchHHHHHhcCCCcccEEEEEEcCC
Q 031721 112 VVKGLDEGILTMKTGGKRRLYIPGP 136 (154)
Q Consensus 112 ~i~g~~~al~~mk~Ge~~~i~ip~~ 136 (154)
+..-+-.||.|.++|+...+..|..
T Consensus 90 ~~SPlG~ALlGk~~GD~v~v~~p~G 114 (136)
T 3bmb_A 90 VMAPVGAALLGLRVGDSIHWELPGG 114 (136)
T ss_dssp TTSHHHHHHTTCBTTCEEEEEETTT
T ss_pred CCCHHHHHHcCCCCCCEEEEEcCCC
Confidence 3457899999999999999998854
No 69
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A*
Probab=27.23 E-value=1.8e+02 Score=22.12 Aligned_cols=52 Identities=21% Similarity=0.113 Sum_probs=36.5
Q ss_pred CCCCCCCCEEEEEEEEEeCCCcEEEccCCCCccEEEEeCCC---------ccchHHHHHhcCCCcccE
Q 031721 70 GPSPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSG---------QVVKGLDEGILTMKTGGK 128 (154)
Q Consensus 70 G~~~~~gd~V~v~y~~~~~~g~~~dss~~~~~p~~f~lG~~---------~~i~g~~~al~~mk~Ge~ 128 (154)
...++.||.|.+++..+. +|-.-|.+ .+|.+|.- .+..+++.++..+|.|-+
T Consensus 153 ~~~L~~GDiv~iD~G~~~-~GY~sD~t------RT~~vG~~~~~~~~l~~~v~~a~~~ai~~~kPG~~ 213 (329)
T 2b3h_A 153 RRPLQEGDIVNVDITLYR-NGYHGDLN------ETFFVGEVDDGARKLVQTTYECLMQAIDAVKPGVR 213 (329)
T ss_dssp SCBCCTTCEEEEEEEEEE-TTEEEEEE------EEEECSSCCHHHHHHHHHHHHHHHHHHHTCCTTCB
T ss_pred CcCCCCCCEEEEEeeEEE-CCEEEeeE------EEEEeCCCCHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 345899999999999886 77655554 56777741 134567777777777754
No 70
>2rqs_A Parvulin-like peptidyl-prolyl isomerase; CIS/trans isomerisation, cenarcheaum symbiosum, low temperat NIMA-kinase, PIN1, cell cycle; NMR {Cenarchaeum symbiosum}
Probab=26.84 E-value=44 Score=20.51 Aligned_cols=23 Identities=22% Similarity=0.560 Sum_probs=19.2
Q ss_pred CCCccchHHHHHhcCCCcccEEE
Q 031721 108 GSGQVVKGLDEGILTMKTGGKRR 130 (154)
Q Consensus 108 G~~~~i~g~~~al~~mk~Ge~~~ 130 (154)
..+++.+.|++++..|++|+...
T Consensus 60 ~~~~l~~~f~~a~~~l~~G~is~ 82 (97)
T 2rqs_A 60 GRGKMVKPFEDAAFRLQVGEVSE 82 (97)
T ss_dssp CTTSSCHHHHHHHTTCTTSCBCC
T ss_pred cCCCCCHHHHHHHHcCCCCCccc
Confidence 34578999999999999998643
No 71
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A*
Probab=26.67 E-value=1.8e+02 Score=20.79 Aligned_cols=52 Identities=23% Similarity=0.276 Sum_probs=34.9
Q ss_pred CCCCCCCCEEEEEEEEEeCCCcEEEccCCCCccEEEEeCCC-c---------cchHHHHHhcCCCcccE
Q 031721 70 GPSPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSG-Q---------VVKGLDEGILTMKTGGK 128 (154)
Q Consensus 70 G~~~~~gd~V~v~y~~~~~~g~~~dss~~~~~p~~f~lG~~-~---------~i~g~~~al~~mk~Ge~ 128 (154)
...++.||.|.+++-... +|-.-|.+ .+|.+|.- . +..+++.++..+|.|-+
T Consensus 81 ~~~l~~gd~v~iD~g~~~-~gy~sD~t------RT~~vG~~~~~~~~~~~~~~~~a~~~~i~~~kpG~~ 142 (252)
T 1qxy_A 81 KRVIREGDLVNIDVSALK-NGYYADTG------ISFVVGESDDPMKQKVCDVATMAFENAIAKVKPGTK 142 (252)
T ss_dssp SCBCCTTCEEEEEEEEEE-TTEEEEEE------EEEECSCCSCTHHHHHHHHHHHHHHHHHTTCCTTCB
T ss_pred CcCcCCCCEEEEEeeEEE-CCEEEEEE------EEEEcCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 345899999999998875 77655554 55666641 1 22456666777777754
No 72
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus}
Probab=26.54 E-value=1.9e+02 Score=21.25 Aligned_cols=51 Identities=25% Similarity=0.313 Sum_probs=34.2
Q ss_pred CCCCCCCCEEEEEEEEEeCCCcEEEccCCCCccEEEEeCCC---------ccchHHHHHhcCCCccc
Q 031721 70 GPSPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSG---------QVVKGLDEGILTMKTGG 127 (154)
Q Consensus 70 G~~~~~gd~V~v~y~~~~~~g~~~dss~~~~~p~~f~lG~~---------~~i~g~~~al~~mk~Ge 127 (154)
...++.||.|.+++-... +|-.-|.+ .+|.+|.- .+..+.+.++..+|+|-
T Consensus 113 ~~~l~~Gd~v~iD~G~~~-~GY~sD~t------RT~~vG~~~~~~~~~~~~v~~a~~~~i~~~kpG~ 172 (286)
T 3tav_A 113 TAVLADGDLVSIDCGAIL-DGWHGDSA------WTFAVGTVIPSDEALSEATRLSMEAGIAAMIPGN 172 (286)
T ss_dssp TCBCCTTCEEEEEEEEEE-TTEEEEEE------EEEESSSCCHHHHHHHHHHHHHHHHHHHTCCTTC
T ss_pred CcccCCCCEEEEEEEEEE-CCEEEeeE------EEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 345899999999998875 77655554 56677731 13355666666677664
No 73
>3uor_A ABC transporter sugar binding protein; ALFA/beta protein, periplasmic-binding protein, maltose, SUG binding protein; 2.20A {Xanthomonas axonopodis PV}
Probab=24.92 E-value=15 Score=28.92 Aligned_cols=24 Identities=8% Similarity=-0.159 Sum_probs=0.0
Q ss_pred hhHHHHHHHHHHHHHhhhcccccc
Q 031721 4 VSRRDLIGLVLGVSTLILDSFDAK 27 (154)
Q Consensus 4 ~~r~~~l~~~l~~~a~~l~~~~~~ 27 (154)
+||++++..++++++++|+.|...
T Consensus 2 ~~~~~~~~~~~~~~~~lLagC~~~ 25 (458)
T 3uor_A 2 GSSHHHHHHSSGLVPRGSHMCERS 25 (458)
T ss_dssp ------------------------
T ss_pred CCcccccccccchhhhhhhcCCCC
Confidence 477777777777777777777543
No 74
>2pv1_A Chaperone SURA; surviVal protein A, peptidyl-prolyl CIS-trans isomerase domain, peptide, complex; 1.30A {Escherichia coli} SCOP: d.26.1.1 PDB: 2pv2_A
Probab=24.41 E-value=67 Score=19.76 Aligned_cols=22 Identities=14% Similarity=0.072 Sum_probs=18.9
Q ss_pred CCccchHHHHHhcCCCcccEEE
Q 031721 109 SGQVVKGLDEGILTMKTGGKRR 130 (154)
Q Consensus 109 ~~~~i~g~~~al~~mk~Ge~~~ 130 (154)
.+.+.+.|++++..|++|+...
T Consensus 65 ~~~l~~~f~~a~~~l~~G~is~ 86 (103)
T 2pv1_A 65 IQELPGIFAQALSTAKKGDIVG 86 (103)
T ss_dssp GGGSCHHHHHHTTTCCTTCEEE
T ss_pred hhhcCHHHHHHHHcCCCCCeec
Confidence 3578899999999999999764
No 75
>2hd9_A UPF0310 protein PH1033; pyrococcus horikoshii OT3, structural genomics, NPPSFA, NATI project on protein structural and functional analyses; HET: CIT; 1.35A {Pyrococcus horikoshii} SCOP: b.122.1.8 PDB: 1wmm_A* 2zbn_A
Probab=23.66 E-value=31 Score=23.27 Aligned_cols=20 Identities=20% Similarity=0.380 Sum_probs=16.8
Q ss_pred HHHhcCCCcccEEEEEEcCC
Q 031721 117 DEGILTMKTGGKRRLYIPGP 136 (154)
Q Consensus 117 ~~al~~mk~Ge~~~i~ip~~ 136 (154)
..-|..|++||...||.+..
T Consensus 29 rn~lr~mk~GD~~~fYhs~~ 48 (145)
T 2hd9_A 29 KNTLSRVKPGDKLVIYVRQE 48 (145)
T ss_dssp HHHHTTCCTTCEEEEEECCE
T ss_pred HHHHHhCCCCCEEEEEEccc
Confidence 34678999999999999865
No 76
>3gpk_A PPIC-type peptidyl-prolyl CIS-trans isomerase; rotamase,ppiase domain, 11189O3,PSI2., structural genomics; 1.55A {Novosphingobium aromaticivorans}
Probab=23.44 E-value=53 Score=21.00 Aligned_cols=23 Identities=17% Similarity=0.098 Sum_probs=19.6
Q ss_pred CCCccchHHHHHhcCCCcccEEE
Q 031721 108 GSGQVVKGLDEGILTMKTGGKRR 130 (154)
Q Consensus 108 G~~~~i~g~~~al~~mk~Ge~~~ 130 (154)
..+++.+.|++++..|++|+...
T Consensus 65 ~~~~l~~~f~~a~~~l~~GeiS~ 87 (112)
T 3gpk_A 65 RLAQLPTELATTAASMGPGQLAG 87 (112)
T ss_dssp CGGGSCHHHHHHHHHCCTTCEEE
T ss_pred cccccCHHHHHHHHhCCCCCccc
Confidence 34578999999999999999764
No 77
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1
Probab=23.42 E-value=2.1e+02 Score=20.63 Aligned_cols=52 Identities=21% Similarity=0.188 Sum_probs=35.4
Q ss_pred CCC-CCCCCEEEEEEEEEeCCCcEEEccCCCCccEEEEeCCC---------ccchHHHHHhcCCCcccE
Q 031721 70 GPS-PPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSG---------QVVKGLDEGILTMKTGGK 128 (154)
Q Consensus 70 G~~-~~~gd~V~v~y~~~~~~g~~~dss~~~~~p~~f~lG~~---------~~i~g~~~al~~mk~Ge~ 128 (154)
... ++.||.|.+++-... +|-.-|.+ .+|.+|.. .+..+++.++..+|+|-+
T Consensus 94 ~~~~l~~Gd~v~iD~G~~~-~GY~sD~t------RT~~vG~~~~~~~~~~~~v~~a~~~~i~~~kpG~~ 155 (262)
T 1o0x_A 94 KEKVFKEGDIVSVDVGAVY-QGLYGDAA------VTYIVGETDERGKELVRVTREVLEKAIKMIKPGIR 155 (262)
T ss_dssp TTCBCCTTCEEEEEEEEEE-TTEEEEEE------EEEESSCCCHHHHHHHHHHHHHHHHHHHTCCTTSB
T ss_pred CCcccCCCCEEEEEEEEEE-CCEEEEEE------EEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 456 889999999998876 77655554 56677741 133466666777777654
No 78
>2pn0_A Prokaryotic transcription elongation factor GREA/GREB; structural genomics, APC6349, PSI-2, protein structure initiative; HET: MSE; 1.70A {Nitrosomonas europaea}
Probab=23.29 E-value=44 Score=22.33 Aligned_cols=25 Identities=16% Similarity=0.351 Sum_probs=20.8
Q ss_pred cchHHHHHhcCCCcccEEEEEEcCC
Q 031721 112 VVKGLDEGILTMKTGGKRRLYIPGP 136 (154)
Q Consensus 112 ~i~g~~~al~~mk~Ge~~~i~ip~~ 136 (154)
+..-+-.||.|.++|+...+..|..
T Consensus 93 ~~SPlG~ALlGk~vGD~v~v~~P~G 117 (141)
T 2pn0_A 93 ILAPVGSALLGLAQGDEIEWPKPGG 117 (141)
T ss_dssp TTSTTHHHHTTCBTTCEEEEECTTS
T ss_pred CCCHHHHHHcCCCCCCEEEEEcCCC
Confidence 3456889999999999999988853
No 79
>3qsl_A Putative exported protein; unknown, structural genomics, PSI-biology, midwest center FO structural genomics, MCSG, unknown function; HET: MSE CIT; 2.00A {Bordetella bronchiseptica}
Probab=23.17 E-value=24 Score=26.13 Aligned_cols=10 Identities=20% Similarity=0.225 Sum_probs=5.4
Q ss_pred CceEEEEEec
Q 031721 58 SGLQYKDIKV 67 (154)
Q Consensus 58 ~g~~~~~~~~ 67 (154)
.|+.+++...
T Consensus 62 ~g~~v~~~~~ 71 (346)
T 3qsl_A 62 EGLDVSIADF 71 (346)
T ss_dssp TTCEEEEEEC
T ss_pred hCCeEEEEec
Confidence 3666665533
No 80
>4g2p_A Chaperone SURA; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, pcsep; 1.82A {Salmonella enterica subsp}
Probab=23.10 E-value=41 Score=21.32 Aligned_cols=21 Identities=5% Similarity=0.145 Sum_probs=18.3
Q ss_pred CCccchHHHHHhcCCCcccEE
Q 031721 109 SGQVVKGLDEGILTMKTGGKR 129 (154)
Q Consensus 109 ~~~~i~g~~~al~~mk~Ge~~ 129 (154)
.+.+.+.|++++..|++|+..
T Consensus 70 ~~~l~~~f~~a~~~l~~Geis 90 (110)
T 4g2p_A 70 PDIFDPAFRDALTKLHKGQIS 90 (110)
T ss_dssp GGGSCHHHHHHHHTCCTTCBC
T ss_pred ccccCHHHHHHHHcCCCCCcC
Confidence 457889999999999999865
No 81
>3pmq_A Decaheme cytochrome C MTRF; greek KEY, C type cytochrome, outer membrane, electron trans; HET: HEC; 3.20A {Shewanella oneidensis}
Probab=22.99 E-value=19 Score=30.87 Aligned_cols=24 Identities=13% Similarity=0.025 Sum_probs=0.0
Q ss_pred CcchhHHHHHHHHHHHHHhhhccc
Q 031721 1 MNLVSRRDLIGLVLGVSTLILDSF 24 (154)
Q Consensus 1 m~~~~r~~~l~~~l~~~a~~l~~~ 24 (154)
|+.|+++.+..+++++++++|+.|
T Consensus 1 M~~~~~~~l~~~~~l~~~~~L~gC 24 (669)
T 3pmq_A 1 MNKFASFTTQYSLMLLIATLLSAC 24 (669)
T ss_dssp ------------------------
T ss_pred CCccchhHHHHHHHHHHHHHHhcc
Confidence 788888877665555666666666
No 82
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum}
Probab=21.85 E-value=1.9e+02 Score=22.56 Aligned_cols=52 Identities=19% Similarity=0.067 Sum_probs=35.6
Q ss_pred CCCCCCCCEEEEEEEEEeCCCcEEEccCCCCccEEEEeC---CC---------ccchHHHHHhcCCCcccE
Q 031721 70 GPSPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVG---SG---------QVVKGLDEGILTMKTGGK 128 (154)
Q Consensus 70 G~~~~~gd~V~v~y~~~~~~g~~~dss~~~~~p~~f~lG---~~---------~~i~g~~~al~~mk~Ge~ 128 (154)
...++.||.|.+++.++. +|-.-|.+ .+|.+| .- .+..+++.++..+|.|-+
T Consensus 181 ~r~L~~GDiV~iD~G~~~-~GY~sDit------RT~~vGg~~~~s~e~~~ly~~v~ea~~aai~~ikPG~~ 244 (368)
T 3s6b_A 181 YRPLKSGDIINIDISVFY-KGVHSDLN------ETYFVGDINDVPKEGKELVETCYFSLMEAIKKCKPGMF 244 (368)
T ss_dssp SCBCCTTCEEEEEEEEEE-TTEEEEEE------EEEECSCGGGSCHHHHHHHHHHHHHHHHHHHHCCTTCB
T ss_pred CccccCCCEEEEEEeEEE-CcEEEEEE------EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHccCCCc
Confidence 345899999999999886 67655554 567777 21 134566667777777644
No 83
>2vqe_L 30S ribosomal protein S12, 30S ribosomal protein S6; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: i.1.1.1 PDB: 1gix_O* 1hnw_L* 1hnx_L* 1hnz_L* 1hr0_L 1ibk_L* 1ibl_L* 1ibm_L 1j5e_L 1jgo_O* 1jgp_O* 1jgq_O* 1mj1_O* 1ml5_O* 1mvr_O 1n32_L* 1n33_L* 1n34_L 1n36_L 1xmo_L* ...
Probab=21.84 E-value=1.5e+02 Score=19.79 Aligned_cols=29 Identities=21% Similarity=0.148 Sum_probs=25.3
Q ss_pred eecCCceEEEEEecCCCCCCCCCCEEEEE
Q 031721 54 VTTESGLQYKDIKVGQGPSPPVGFQVAAN 82 (154)
Q Consensus 54 ~~~~~g~~~~~~~~G~G~~~~~gd~V~v~ 82 (154)
+.+.+|..+.-..+|+|-.++++|.|.|.
T Consensus 58 VrL~ngk~VtAyIPG~GhnlqEhs~VLVr 86 (135)
T 2vqe_L 58 VRLTSGYEVTAYIPGEGHNLQEHSVVLIR 86 (135)
T ss_dssp EEETTSCEEEEECCSSCCCCCTTCEEEEE
T ss_pred EEcCCCCEEEEEcCCCCCccCcCCEEEEc
Confidence 45578888888999999889999999987
No 84
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A
Probab=21.03 E-value=1.1e+02 Score=24.14 Aligned_cols=51 Identities=18% Similarity=0.115 Sum_probs=36.2
Q ss_pred CCCCCCCEEEEEEEEEeCCCcEEEccCCCCccEEEEeCC---Cc-----------cchHHHHHhcCCCcccE
Q 031721 71 PSPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGS---GQ-----------VVKGLDEGILTMKTGGK 128 (154)
Q Consensus 71 ~~~~~gd~V~v~y~~~~~~g~~~dss~~~~~p~~f~lG~---~~-----------~i~g~~~al~~mk~Ge~ 128 (154)
..++.||.|.|++-... +|-.-|.+ .+|.+|. +. +..+++.++..+++|-+
T Consensus 105 ~~L~~GDiV~ID~G~~~-~GY~sD~t------RT~~vG~~~eg~~s~~~~~l~~~~~~a~~~~i~~~kPG~~ 169 (401)
T 2q8k_A 105 YILKEGDLVKIDLGVHV-DGFIANVA------HTFVVDVAQGTQVTGRKADVIKAAHLCAEAALRLVKPGNQ 169 (401)
T ss_dssp CBCCTTCEEEEEEEEEE-TTEEEEEE------EEEETTCC-CCCBCHHHHHHHHHHHHHHHHHHHHCSTTCB
T ss_pred cccCCCCEEEEEEEEEE-CCEEEEEE------EEEEECCccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 34889999999998876 88766665 6777871 11 23566777777777754
No 85
>3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba}
Probab=20.86 E-value=26 Score=25.77 Aligned_cols=38 Identities=5% Similarity=-0.150 Sum_probs=16.4
Q ss_pred EEEEeCCCccchHHHHHhcCCCcccEEEEEEcCCCCCCC
Q 031721 103 YIFRVGSGQVVKGLDEGILTMKTGGKRRLYIPGPVISNT 141 (154)
Q Consensus 103 ~~f~lG~~~~i~g~~~al~~mk~Ge~~~i~ip~~~~yg~ 141 (154)
+.|..|.+.-...|..-...+..-+ ..++++-..++|.
T Consensus 99 vv~~HG~~~~~~~~~~~~~~la~~G-~~vv~~d~~g~g~ 136 (306)
T 3vis_A 99 IAISPGYTGTQSSIAWLGERIASHG-FVVIAIDTNTTLD 136 (306)
T ss_dssp EEEECCTTCCHHHHHHHHHHHHTTT-EEEEEECCSSTTC
T ss_pred EEEeCCCcCCHHHHHHHHHHHHhCC-CEEEEecCCCCCC
Confidence 5566665544444433333222211 3444444444443
No 86
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ...
Probab=20.77 E-value=2.4e+02 Score=20.25 Aligned_cols=50 Identities=22% Similarity=0.127 Sum_probs=34.4
Q ss_pred CCCCCCCEEEEEEEEEeCCCcEEEccCCCCccEEEEeCCC---------ccchHHHHHhcCCCccc
Q 031721 71 PSPPVGFQVAANYVAMIPSGQIFDSSLEKGRPYIFRVGSG---------QVVKGLDEGILTMKTGG 127 (154)
Q Consensus 71 ~~~~~gd~V~v~y~~~~~~g~~~dss~~~~~p~~f~lG~~---------~~i~g~~~al~~mk~Ge 127 (154)
..++.||.|.+++-... +|-.-|.+ .+|.+|.- .+..+.+.++..+|+|-
T Consensus 85 ~~l~~gd~v~iD~G~~~-~gy~sD~t------RT~~vG~~~~~~~~~~~~v~~a~~~~i~~~kpG~ 143 (263)
T 2gg2_A 85 KLLKDGDIVNIDVTVIK-DGFHGDTS------KMFIVGKPTIMGERLCRITQESLYLALRMVKPGI 143 (263)
T ss_dssp CBCCTTCEEEEEEEEEE-TTEEEEEE------EEEECSSCCHHHHHHHHHHHHHHHHHHHHCSTTC
T ss_pred cCcCCCCEEEEEEEEEE-CCEEEEEE------EEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 45899999999998876 77655554 56677741 13455666677777763
No 87
>1jns_A Peptidyl-prolyl CIS-trans isomerase C; alpha-beta sandwich, CIS peptide bond; NMR {Escherichia coli} SCOP: d.26.1.1 PDB: 1jnt_A
Probab=20.42 E-value=54 Score=19.79 Aligned_cols=22 Identities=18% Similarity=0.261 Sum_probs=18.8
Q ss_pred CCccchHHHHHhcCCCcccEEE
Q 031721 109 SGQVVKGLDEGILTMKTGGKRR 130 (154)
Q Consensus 109 ~~~~i~g~~~al~~mk~Ge~~~ 130 (154)
.+++.+.|++++..|++|+...
T Consensus 54 ~~~l~~~f~~a~~~l~~G~is~ 75 (92)
T 1jns_A 54 QGQMVPAFDKVVFSCPVLEPTG 75 (92)
T ss_dssp TTSSCHHHHHHHHHSCTTCCEE
T ss_pred CcccCHHHHHHHHhCCCCCcCC
Confidence 3478999999999999998754
No 88
>3ui4_A Peptidyl-prolyl CIS-trans isomerase NIMA-interact; peptidyl-prolyl-isomerase; 0.80A {Homo sapiens} SCOP: d.26.1.1 PDB: 3ui5_A 3ui6_A 1fjd_A 1eq3_A
Probab=20.06 E-value=55 Score=20.33 Aligned_cols=21 Identities=19% Similarity=0.401 Sum_probs=18.0
Q ss_pred CCccchHHHHHhcCCCcccEE
Q 031721 109 SGQVVKGLDEGILTMKTGGKR 129 (154)
Q Consensus 109 ~~~~i~g~~~al~~mk~Ge~~ 129 (154)
.+++.+.|++++..|++|+..
T Consensus 57 ~~~l~~~f~~a~~~l~~G~vs 77 (101)
T 3ui4_A 57 RGSMVGPFQEAAFALPVSGMD 77 (101)
T ss_dssp TTSSCHHHHHHHHTSCCCBTT
T ss_pred CCCCCHHHHHHHHhCCCCCCc
Confidence 457899999999999999753
No 89
>2jzv_A Foldase protein PRSA; ppiase, parvulin, proline isomerase, lipoprotein, membrane, palmitate, rotamase; NMR {Staphylococcus aureus}
Probab=20.04 E-value=53 Score=20.60 Aligned_cols=21 Identities=24% Similarity=0.493 Sum_probs=18.2
Q ss_pred CCccchHHHHHhcCCCcccEE
Q 031721 109 SGQVVKGLDEGILTMKTGGKR 129 (154)
Q Consensus 109 ~~~~i~g~~~al~~mk~Ge~~ 129 (154)
.+.+.+.|++++..|++|+..
T Consensus 75 ~~~l~~~f~~a~~~l~~G~is 95 (111)
T 2jzv_A 75 KGQTDKDFEKALFKLKDGEVS 95 (111)
T ss_dssp TTSSCHHHHHHHHTCCTTCBC
T ss_pred CCcccHHHHHHHHhCCCCCcC
Confidence 457899999999999999864
Done!