Query 031724
Match_columns 154
No_of_seqs 20 out of 22
Neff 2.3
Searched_HMMs 13730
Date Mon Mar 25 06:40:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031724.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/031724hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2d8ca1 a.60.1.2 (A:7-91) Sphi 79.0 0.44 3.2E-05 31.2 1.9 28 43-70 6-35 (85)
2 d1kw4a_ a.60.1.2 (A:) Polyhome 77.2 0.73 5.3E-05 28.0 2.4 29 46-74 3-31 (70)
3 d1pk3a1 a.60.1.2 (A:17-79) Pol 73.9 0.77 5.6E-05 27.5 1.9 24 51-74 1-25 (63)
4 d1wwva1 a.60.1.2 (A:8-85) Conn 69.6 0.94 6.9E-05 28.2 1.6 17 46-62 2-18 (78)
5 d1mwqa_ d.58.4.7 (A:) Hypothet 51.3 1.8 0.00013 28.2 0.4 15 52-66 69-83 (100)
6 d1zuna1 c.26.2.2 (A:1-211) Sul 38.8 6.3 0.00046 25.1 1.6 17 46-62 183-199 (211)
7 d2bufa1 c.73.1.2 (A:2-301) N-a 35.4 14 0.001 27.5 3.4 49 34-82 215-264 (300)
8 d1czan2 c.55.1.3 (N:223-465) M 31.3 7.3 0.00053 29.1 1.1 18 83-100 226-243 (243)
9 d1v8za1 c.79.1.1 (A:1-386) Try 31.2 15 0.0011 27.8 2.9 34 11-48 20-53 (386)
10 d1sura_ c.26.2.2 (A:) Phosphoa 30.0 10 0.00074 26.5 1.6 17 46-62 179-195 (215)
11 d1qopb_ c.79.1.1 (B:) Tryptoph 28.1 10 0.00073 29.5 1.4 36 11-50 25-60 (390)
12 d2f2ha4 c.1.8.13 (A:248-585) P 27.7 13 0.00093 27.4 1.9 20 33-52 2-21 (338)
13 d2oc6a1 d.198.4.1 (A:1-123) Un 21.5 14 0.00099 24.4 0.9 29 55-83 3-33 (123)
14 d2f3na1 a.60.1.2 (A:2-65) Sh3 20.7 14 0.001 21.3 0.8 15 49-63 2-16 (64)
No 1
>d2d8ca1 a.60.1.2 (A:7-91) Sphingomyelin synthase 1, SMS1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=78.95 E-value=0.44 Score=31.18 Aligned_cols=28 Identities=25% Similarity=0.493 Sum_probs=20.9
Q ss_pred cCCCCCCCCCchhhHHhhhcC--CCCchhH
Q 031724 43 KREKPLPSWSPSDVDAFIATD--PVHGPAL 70 (154)
Q Consensus 43 ~RdkPLP~Ws~sDVeeFIaSD--PVyGP~L 70 (154)
...+|+.+||..||.+|+.+= +-|-|..
T Consensus 6 ~~~~~V~~Ws~~dV~~WL~~~gl~~Y~~~F 35 (85)
T d2d8ca1 6 RTMKEVVYWSPKKVADWLLENAMPEYCEPL 35 (85)
T ss_dssp SCCSCCSSCCTTHHHHHHHHTTCTTTTTTT
T ss_pred cccCChhhCCHHHHHHHHHHCcHHHHHHHH
Confidence 457899999999999998752 3354444
No 2
>d1kw4a_ a.60.1.2 (A:) Polyhomeotic {Drosophila melanogaster [TaxId: 7227]}
Probab=77.18 E-value=0.73 Score=28.00 Aligned_cols=29 Identities=31% Similarity=0.453 Sum_probs=20.3
Q ss_pred CCCCCCCchhhHHhhhcCCCCchhHHhHH
Q 031724 46 KPLPSWSPSDVDAFIATDPVHGPALKSAR 74 (154)
Q Consensus 46 kPLP~Ws~sDVeeFIaSDPVyGP~LK~~R 74 (154)
.|+-.||..||-+|+.+-...+.-.+..+
T Consensus 3 ~pv~~Ws~~dV~~wL~~~~~~~~y~~~F~ 31 (70)
T d1kw4a_ 3 PPISSWSVDDVSNFIRELPGCQDYVDDFI 31 (70)
T ss_dssp CCGGGCCHHHHHHHHHTSTTCGGGHHHHH
T ss_pred CchhcCCHHHHHHHHHhCCCcHHHHHHHH
Confidence 46667999999999998544444444333
No 3
>d1pk3a1 a.60.1.2 (A:17-79) Polycomb protein Scm {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=73.92 E-value=0.77 Score=27.53 Aligned_cols=24 Identities=21% Similarity=0.296 Sum_probs=17.4
Q ss_pred CCchhhHHhhhc-CCCCchhHHhHH
Q 031724 51 WSPSDVDAFIAT-DPVHGPALKSAR 74 (154)
Q Consensus 51 Ws~sDVeeFIaS-DPVyGP~LK~~R 74 (154)
||..||-+|+.+ +|..++-.+..+
T Consensus 1 Ws~~dV~~wL~~~~~~~~~y~~~F~ 25 (63)
T d1pk3a1 1 WTIEEVIQYIESNDNSLAVHGDLFR 25 (63)
T ss_dssp CCHHHHHHHHHHHCGGGGGGHHHHH
T ss_pred CCHHHHHHHHHHccccHHHHHHHHH
Confidence 999999999986 566665544443
No 4
>d1wwva1 a.60.1.2 (A:8-85) Connector enhancer of kinase suppressor of Ras 1, CNK1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=69.63 E-value=0.94 Score=28.17 Aligned_cols=17 Identities=24% Similarity=0.866 Sum_probs=15.7
Q ss_pred CCCCCCCchhhHHhhhc
Q 031724 46 KPLPSWSPSDVDAFIAT 62 (154)
Q Consensus 46 kPLP~Ws~sDVeeFIaS 62 (154)
||...||..||-+|+.+
T Consensus 2 epv~~Wt~~~V~~WL~~ 18 (78)
T d1wwva1 2 EPVETWTPGKVATWLRG 18 (78)
T ss_dssp CCTTTCCTTTHHHHHHH
T ss_pred CChhhCCHHHHHHHHHH
Confidence 79999999999999975
No 5
>d1mwqa_ d.58.4.7 (A:) Hypothetical protein HI0828 {Haemophilus influenzae [TaxId: 727]}
Probab=51.33 E-value=1.8 Score=28.17 Aligned_cols=15 Identities=20% Similarity=0.295 Sum_probs=13.0
Q ss_pred CchhhHHhhhcCCCC
Q 031724 52 SPSDVDAFIATDPVH 66 (154)
Q Consensus 52 s~sDVeeFIaSDPVy 66 (154)
|.++|++||+.||-|
T Consensus 69 ~~e~a~~~~~~DPy~ 83 (100)
T d1mwqa_ 69 NLQAAKDWAAQDPYV 83 (100)
T ss_dssp SHHHHHHHHHTCHHH
T ss_pred CHHHHHHHHHcCCch
Confidence 568999999999954
No 6
>d1zuna1 c.26.2.2 (A:1-211) Sulfate adenylyltransferase subunit 2, CysD {Pseudomonas syringae pv. tomato [TaxId: 323]}
Probab=38.78 E-value=6.3 Score=25.06 Aligned_cols=17 Identities=29% Similarity=0.603 Sum_probs=15.0
Q ss_pred CCCCCCCchhhHHhhhc
Q 031724 46 KPLPSWSPSDVDAFIAT 62 (154)
Q Consensus 46 kPLP~Ws~sDVeeFIaS 62 (154)
.||=-||.+||-+||..
T Consensus 183 ~PI~~Wt~~DVw~yl~~ 199 (211)
T d1zuna1 183 FPLSNWTELDIWQYIYL 199 (211)
T ss_dssp CTTTTCCHHHHHHHHHH
T ss_pred echhhCCHHHHHHHHHH
Confidence 49989999999999864
No 7
>d2bufa1 c.73.1.2 (A:2-301) N-acetyl-l-glutamate kinase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=35.41 E-value=14 Score=27.49 Aligned_cols=49 Identities=24% Similarity=0.317 Sum_probs=36.2
Q ss_pred hhhhhhhhh-cCCCCCCCCCchhhHHhhhcCCCCchhHHhHHHHHHHHhh
Q 031724 34 FLENYTRFT-KREKPLPSWSPSDVDAFIATDPVHGPALKSAREAVNFALA 82 (154)
Q Consensus 34 fl~~y~~~~-~RdkPLP~Ws~sDVeeFIaSDPVyGP~LK~~Rea~~fa~a 82 (154)
||.+-.-++ ...++++.-+.+++++.|+.-.++|..+.+++.|.+++-.
T Consensus 215 ~Ltdv~Gv~~~~g~~~~~l~~~~~~~li~~~~i~gGM~~Kl~aa~~a~~~ 264 (300)
T d2bufa1 215 LLTNIAGLMDKQGQVLTGLSTEQVNELIADGTIYGGMLPKIRCALEAVQG 264 (300)
T ss_dssp EEESSSCCBCTTSCBCCEECHHHHHHHHHTTCSCTTHHHHHHHHHHHHHT
T ss_pred EEcCCCccccCCCcchhhccHHHHHHHHHcCCcCchHHHHHHHHHHHHHc
Confidence 344433343 4568899999999999999999999877777777665443
No 8
>d1czan2 c.55.1.3 (N:223-465) Mammalian type I hexokinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.25 E-value=7.3 Score=29.07 Aligned_cols=18 Identities=33% Similarity=0.468 Sum_probs=16.0
Q ss_pred hhhhhhhhhhhhhhhhcc
Q 031724 83 GSLIGAVSTAGVAWKYSR 100 (154)
Q Consensus 83 Ga~vGa~~tagva~kYSk 100 (154)
|+.+||+-.|+||-|++|
T Consensus 226 GSg~GAAl~Aa~a~r~~~ 243 (243)
T d1czan2 226 GSGKGAAMVTAVAYRLAE 243 (243)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhhC
Confidence 899999999999998875
No 9
>d1v8za1 c.79.1.1 (A:1-386) Tryptophan synthase, beta-subunit {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=31.22 E-value=15 Score=27.77 Aligned_cols=34 Identities=21% Similarity=0.397 Sum_probs=22.6
Q ss_pred hhHhHHhHhhHHhHHHHHhhhhhhhhhhhhhhcCCCCC
Q 031724 11 SEQQSFFRKHWEGYKEFWGERFSFLENYTRFTKREKPL 48 (154)
Q Consensus 11 ~e~~~~~k~~weg~K~~W~e~Fsfl~~y~~~~~RdkPL 48 (154)
+|-..-|++... +++||+|.-.+|++| .+|.+||
T Consensus 20 ~~~~~~~~~~~~-~~~f~~~~~~~~~~~---~~rpTPL 53 (386)
T d1v8za1 20 KELEKAYKRFKD-DEEFNRQLNYYLKTW---AGRPTPL 53 (386)
T ss_dssp HHHHHHHHHHHT-CHHHHHHHHHHHHHT---TCCSCCE
T ss_pred HHHHHHHHHHhc-CHHHHHHHHHHHHhc---CCCCCcc
Confidence 344444555544 378998866666666 7898988
No 10
>d1sura_ c.26.2.2 (A:) Phosphoadenylyl sulphate (PAPS) reductase {Escherichia coli [TaxId: 562]}
Probab=29.96 E-value=10 Score=26.55 Aligned_cols=17 Identities=12% Similarity=0.544 Sum_probs=15.1
Q ss_pred CCCCCCCchhhHHhhhc
Q 031724 46 KPLPSWSPSDVDAFIAT 62 (154)
Q Consensus 46 kPLP~Ws~sDVeeFIaS 62 (154)
.||=-||..||.+||+.
T Consensus 179 ~Pi~~Wt~~dVw~Yi~~ 195 (215)
T d1sura_ 179 LPIIDWDNRTIYQYLQK 195 (215)
T ss_dssp CTTTTCCHHHHHHHHHH
T ss_pred echHhCCHHHHHHHHHH
Confidence 38888999999999975
No 11
>d1qopb_ c.79.1.1 (B:) Tryptophan synthase, beta-subunit {Salmonella typhimurium [TaxId: 90371]}
Probab=28.15 E-value=10 Score=29.54 Aligned_cols=36 Identities=22% Similarity=0.278 Sum_probs=23.0
Q ss_pred hhHhHHhHhhHHhHHHHHhhhhhhhhhhhhhhcCCCCCCC
Q 031724 11 SEQQSFFRKHWEGYKEFWGERFSFLENYTRFTKREKPLPS 50 (154)
Q Consensus 11 ~e~~~~~k~~weg~K~~W~e~Fsfl~~y~~~~~RdkPLP~ 50 (154)
+|-...|.+.+ .+++||.|.-.+|++| .+|.+||=.
T Consensus 25 ~~l~~~~~~~~-~~~~f~~e~~~~~~~~---~grpTPL~~ 60 (390)
T d1qopb_ 25 NQLEEAFVSAQ-KDPEFQAQFADLLKNY---AGRPTALTK 60 (390)
T ss_dssp HHHHHHHHHHH-TCHHHHHHHHHHHHHT---TCCSCCEEE
T ss_pred HHHHHHHHHHH-cCHHHHHHHHHHHHhc---CCCCchhhE
Confidence 44444455444 3578999876666555 689888744
No 12
>d2f2ha4 c.1.8.13 (A:248-585) Putative glucosidase YicI, domain 2 {Escherichia coli [TaxId: 562]}
Probab=27.72 E-value=13 Score=27.40 Aligned_cols=20 Identities=50% Similarity=0.931 Sum_probs=16.4
Q ss_pred hhhhhhhhhhcCCCCCCCCC
Q 031724 33 SFLENYTRFTKREKPLPSWS 52 (154)
Q Consensus 33 sfl~~y~~~~~RdkPLP~Ws 52 (154)
+-++.|.++++|..-+|+|+
T Consensus 2 ~vi~~Y~~ltG~p~lpP~wa 21 (338)
T d2f2ha4 2 AVLDRYTRFTGRPALPPAWS 21 (338)
T ss_dssp HHHHHHHHHHCCCCCCCGGG
T ss_pred hHHHHHHHHhCCCCCCcHHH
Confidence 35788999999987778885
No 13
>d2oc6a1 d.198.4.1 (A:1-123) Uncharacterized protein YdhG {Bacillus subtilis [TaxId: 1423]}
Probab=21.45 E-value=14 Score=24.40 Aligned_cols=29 Identities=14% Similarity=0.216 Sum_probs=23.6
Q ss_pred hhHHhhhc--CCCCchhHHhHHHHHHHHhhh
Q 031724 55 DVDAFIAT--DPVHGPALKSAREAVNFALAG 83 (154)
Q Consensus 55 DVeeFIaS--DPVyGP~LK~~Rea~~fa~aG 83 (154)
.|||||++ ||..=.+|..+|+...=.+-+
T Consensus 3 ~~~eYl~~~~~p~~r~~l~~l~~~I~~~~P~ 33 (123)
T d2oc6a1 3 VFSEYLAGIADPFHRERTEEVLTWIKNKYPN 33 (123)
T ss_dssp GGHHHHHTCCSHHHHHHHHHHHHHHHHHSTT
T ss_pred hHHHHHHhCCCHHHHHHHHHHHHHHHHHhhc
Confidence 58999997 788989999999987766544
No 14
>d2f3na1 a.60.1.2 (A:2-65) Sh3 and multiple ankyrin repeat domains 3 (Shank3) {Rat(Rattus norvegicus) [TaxId: 10116]}
Probab=20.67 E-value=14 Score=21.33 Aligned_cols=15 Identities=27% Similarity=0.505 Sum_probs=12.5
Q ss_pred CCCCchhhHHhhhcC
Q 031724 49 PSWSPSDVDAFIATD 63 (154)
Q Consensus 49 P~Ws~sDVeeFIaSD 63 (154)
..||..||.+|+.+=
T Consensus 2 ~~Ws~~~V~~wL~~~ 16 (64)
T d2f3na1 2 QLWSKFDVGDWLESI 16 (64)
T ss_dssp GGCCHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHC
Confidence 469999999998764
Done!