BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031733
(153 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O22644|RL23A_FRIAG 60S ribosomal protein L23A OS=Fritillaria agrestis GN=RPL23A PE=2
SV=1
Length = 154
Score = 243 bits (620), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 137/154 (88%), Positives = 143/154 (92%), Gaps = 1/154 (0%)
Query: 1 MAPKVDSSKKGDPKAQATKVAKAVKSG-PTFKKKAKKMRTSVTFHRPKTLKKDRNPKYPR 59
MAP +KK D KAQA KVAKAVKSG T +KKAKK+RTSVTFHRPKTLKKDRNPKYPR
Sbjct: 1 MAPPAKVAKKPDGKAQALKVAKAVKSGVSTLQKKAKKIRTSVTFHRPKTLKKDRNPKYPR 60
Query: 60 ISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTK 119
ISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADK+KIK AVKKMY+IQTK
Sbjct: 61 ISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKAAVKKMYDIQTK 120
Query: 120 KVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 153
KVNTLIRPDGTKKAYVRLTPDYDALD+ANKIGII
Sbjct: 121 KVNTLIRPDGTKKAYVRLTPDYDALDIANKIGII 154
>sp|Q9AT35|RL23A_DAUCA 60S ribosomal protein L23a OS=Daucus carota GN=RPL23A PE=2 SV=1
Length = 154
Score = 239 bits (611), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 134/154 (87%), Positives = 141/154 (91%), Gaps = 1/154 (0%)
Query: 1 MAP-KVDSSKKGDPKAQATKVAKAVKSGPTFKKKAKKMRTSVTFHRPKTLKKDRNPKYPR 59
M+P KVD +KK D KAQA K AKAVKSG T KK KK+RTSVTFHRP+TL KDRNPKYPR
Sbjct: 1 MSPAKVDVTKKSDAKAQALKTAKAVKSGTTKFKKVKKIRTSVTFHRPRTLTKDRNPKYPR 60
Query: 60 ISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTK 119
ISA PRNKLD YQILKYPLTTESAMKKIEDNNTLVFIVDIRA+K+KIKDAVKKMY+IQTK
Sbjct: 61 ISATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRANKKKIKDAVKKMYDIQTK 120
Query: 120 KVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 153
KVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 121 KVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 154
>sp|Q07761|RL23A_TOBAC 60S ribosomal protein L23a OS=Nicotiana tabacum GN=RPL23A PE=2 SV=1
Length = 154
Score = 213 bits (543), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 137/154 (88%), Positives = 143/154 (92%), Gaps = 1/154 (0%)
Query: 1 MAP-KVDSSKKGDPKAQATKVAKAVKSGPTFKKKAKKMRTSVTFHRPKTLKKDRNPKYPR 59
MAP K D SKK DPKAQA KVAKAVKSG T KKK++K+RT VTFHRPKTLKKDRNPKYPR
Sbjct: 1 MAPAKADPSKKSDPKAQAAKVAKAVKSGSTLKKKSQKIRTKVTFHRPKTLKKDRNPKYPR 60
Query: 60 ISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTK 119
ISAP RNKLD Y ILKYPLTTESAMKKIEDNNTLVFIVDI+ADK+KIKDAVKKMY+IQTK
Sbjct: 61 ISAPGRNKLDQYGILKYPLTTESAMKKIEDNNTLVFIVDIKADKKKIKDAVKKMYDIQTK 120
Query: 120 KVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 153
KVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 121 KVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 154
>sp|Q9M3C3|R23A2_ARATH 60S ribosomal protein L23a-2 OS=Arabidopsis thaliana GN=RPL23AB
PE=2 SV=1
Length = 154
Score = 206 bits (524), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 132/154 (85%), Positives = 139/154 (90%), Gaps = 1/154 (0%)
Query: 1 MAP-KVDSSKKGDPKAQATKVAKAVKSGPTFKKKAKKMRTSVTFHRPKTLKKDRNPKYPR 59
M+P KVD +KK DPKA+A K AKAVKSG KK AKK+RT VTFHRPKTL R PKYP+
Sbjct: 1 MSPAKVDVTKKADPKAKALKAAKAVKSGQIVKKPAKKIRTKVTFHRPKTLTVPRKPKYPK 60
Query: 60 ISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTK 119
ISA PRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADK+KIKDAVKKMY+IQTK
Sbjct: 61 ISATPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTK 120
Query: 120 KVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 153
KVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 121 KVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 154
>sp|Q8LD46|R23A1_ARATH 60S ribosomal protein L23a-1 OS=Arabidopsis thaliana GN=RPL23AA
PE=2 SV=2
Length = 154
Score = 202 bits (514), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 133/154 (86%), Positives = 141/154 (91%), Gaps = 1/154 (0%)
Query: 1 MAP-KVDSSKKGDPKAQATKVAKAVKSGPTFKKKAKKMRTSVTFHRPKTLKKDRNPKYPR 59
M+P KVD++KK DPKA+A K AKAVKSG FKKK KK+RT VTFHRPKTL K R KYP+
Sbjct: 1 MSPAKVDTTKKADPKAKALKAAKAVKSGQAFKKKDKKIRTKVTFHRPKTLTKPRTGKYPK 60
Query: 60 ISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTK 119
ISA PRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADK+KIKDAVKKMY+IQTK
Sbjct: 61 ISATPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTK 120
Query: 120 KVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 153
KVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 121 KVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 154
>sp|P62752|RL23A_RAT 60S ribosomal protein L23a OS=Rattus norvegicus GN=Rpl23a PE=2 SV=1
Length = 156
Score = 189 bits (480), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 95/121 (78%), Positives = 105/121 (86%)
Query: 33 KAKKMRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNT 92
K KK+RTS TF RPKTL+ R PKYPR SAP RNKLDHY I+K+PLTTESAMKKIEDNNT
Sbjct: 36 KKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLTTESAMKKIEDNNT 95
Query: 93 LVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGI 152
LVFIVD++A+K +IK AVKK+Y+I KVNTLIRPDG KKAYVRL PDYDALDVANKIGI
Sbjct: 96 LVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGI 155
Query: 153 I 153
I
Sbjct: 156 I 156
>sp|P62751|RL23A_MOUSE 60S ribosomal protein L23a OS=Mus musculus GN=Rpl23a PE=1 SV=1
Length = 156
Score = 189 bits (480), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 95/121 (78%), Positives = 105/121 (86%)
Query: 33 KAKKMRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNT 92
K KK+RTS TF RPKTL+ R PKYPR SAP RNKLDHY I+K+PLTTESAMKKIEDNNT
Sbjct: 36 KKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLTTESAMKKIEDNNT 95
Query: 93 LVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGI 152
LVFIVD++A+K +IK AVKK+Y+I KVNTLIRPDG KKAYVRL PDYDALDVANKIGI
Sbjct: 96 LVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGI 155
Query: 153 I 153
I
Sbjct: 156 I 156
>sp|P62750|RL23A_HUMAN 60S ribosomal protein L23a OS=Homo sapiens GN=RPL23A PE=1 SV=1
Length = 156
Score = 189 bits (480), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 95/121 (78%), Positives = 105/121 (86%)
Query: 33 KAKKMRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNT 92
K KK+RTS TF RPKTL+ R PKYPR SAP RNKLDHY I+K+PLTTESAMKKIEDNNT
Sbjct: 36 KKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLTTESAMKKIEDNNT 95
Query: 93 LVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGI 152
LVFIVD++A+K +IK AVKK+Y+I KVNTLIRPDG KKAYVRL PDYDALDVANKIGI
Sbjct: 96 LVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGI 155
Query: 153 I 153
I
Sbjct: 156 I 156
>sp|Q24JY1|RL23A_BOVIN 60S ribosomal protein L23a OS=Bos taurus GN=RPL23A PE=2 SV=1
Length = 156
Score = 189 bits (480), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 95/121 (78%), Positives = 105/121 (86%)
Query: 33 KAKKMRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNT 92
K KK+RTS TF RPKTL+ R PKYPR SAP RNKLDHY I+K+PLTTESAMKKIEDNNT
Sbjct: 36 KKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLTTESAMKKIEDNNT 95
Query: 93 LVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGI 152
LVFIVD++A+K +IK AVKK+Y+I KVNTLIRPDG KKAYVRL PDYDALDVANKIGI
Sbjct: 96 LVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGI 155
Query: 153 I 153
I
Sbjct: 156 I 156
>sp|P51997|RL25_PUCGR 60S ribosomal protein L25 OS=Puccinia graminis PE=2 SV=2
Length = 158
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 92/160 (57%), Positives = 113/160 (70%), Gaps = 9/160 (5%)
Query: 1 MAPKVDSSKKGDPKAQATKVAKAVKSGP-------TFKKKAKKMRTSVTFHRPKTLKKDR 53
M PK SS K +PKA + K A T K +++RTSVTF RPKTL+ R
Sbjct: 1 MPPK--SSTKAEPKASSAKTQVAKAKSAKKAVVKGTSSKTQRRIRTSVTFRRPKTLRLSR 58
Query: 54 NPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKM 113
PKYPR S P ++D Y+ L PL TESAMKKIEDNNTL+FIVD++A+KR+I DAVKK+
Sbjct: 59 KPKYPRTSVPHAPRMDAYRTLVRPLNTESAMKKIEDNNTLLFIVDLKANKRQIADAVKKL 118
Query: 114 YEIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 153
Y++ +VNTLIRPDG KKA+VRLTP+ DALD+ANKIG I
Sbjct: 119 YDVTPLRVNTLIRPDGKKKAFVRLTPEVDALDIANKIGFI 158
>sp|P48045|RL25_KLULA 60S ribosomal protein L25 OS=Kluyveromyces lactis (strain ATCC 8585
/ CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
GN=RPL25 PE=3 SV=1
Length = 142
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/141 (56%), Positives = 106/141 (75%), Gaps = 1/141 (0%)
Query: 13 PKAQATKVAKAVKSGPTFKKKAKKMRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQ 72
P +AT KAV G T KKA K+RTS +F PKTLK R+PKY + P N+LD Y+
Sbjct: 3 PSTKATAAKKAVVKG-TNGKKALKVRTSASFRLPKTLKLARSPKYATKAVPHYNRLDSYK 61
Query: 73 ILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKK 132
+++ P+T+E+AMKK+ED NTLVF V ++A+K +IK AVK++YE+ VNTL+RP+GTKK
Sbjct: 62 VIEQPITSETAMKKVEDGNTLVFKVSLKANKYQIKKAVKELYEVDVLSVNTLVRPNGTKK 121
Query: 133 AYVRLTPDYDALDVANKIGII 153
AYVRLT D+DALD+AN+IG I
Sbjct: 122 AYVRLTADFDALDIANRIGYI 142
>sp|P48162|R23A1_CAEEL 60S ribosomal protein L23a 1 OS=Caenorhabditis elegans GN=rpl-25.1
PE=3 SV=1
Length = 147
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 77/119 (64%), Positives = 96/119 (80%)
Query: 35 KKMRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLV 94
+++RTSV F RP TLK R ++PR SAP +K+DH++I+++PLTTESAMKKIE++NTLV
Sbjct: 29 RQVRTSVHFRRPVTLKTARQARFPRKSAPKTSKMDHFRIIQHPLTTESAMKKIEEHNTLV 88
Query: 95 FIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 153
FIV A+K +IKDAV K+Y +Q KVNTLI P KKAYVRLT DYDALDVANKIG+I
Sbjct: 89 FIVSNDANKYQIKDAVHKLYNVQALKVNTLITPLQQKKAYVRLTADYDALDVANKIGVI 147
>sp|P08792|RL25_CYBJA 60S ribosomal protein L25 OS=Cyberlindnera jadinii GN=RPL25 PE=3
SV=1
Length = 142
Score = 155 bits (393), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 81/141 (57%), Positives = 101/141 (71%), Gaps = 1/141 (0%)
Query: 13 PKAQATKVAKAVKSGPTFKKKAKKMRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQ 72
P +A KAV G KA K+RTS TF PKTLK R PKY R + P +LD+Y+
Sbjct: 3 PSTKAASAKKAVVKGSN-GSKALKVRTSTTFRLPKTLKLTRAPKYARKAVPHYQRLDNYK 61
Query: 73 ILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKK 132
++ P+ +E+AMKK+ED NTLVF VDI+A+K +IK AVK +YE+ VNTLIRP+GTKK
Sbjct: 62 VIVAPIASETAMKKVEDGNTLVFQVDIKANKHQIKQAVKDLYEVDVLAVNTLIRPNGTKK 121
Query: 133 AYVRLTPDYDALDVANKIGII 153
AYVRLT D+DALD+ANKIG I
Sbjct: 122 AYVRLTADHDALDIANKIGYI 142
>sp|P04456|RL25_YEAST 60S ribosomal protein L25 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPL25 PE=1 SV=4
Length = 142
Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 75/125 (60%), Positives = 97/125 (77%)
Query: 29 TFKKKAKKMRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIE 88
T KKA K+RTS TF PKTLK R PKY + P N+LD Y++++ P+T+E+AMKK+E
Sbjct: 18 TNGKKALKVRTSATFRLPKTLKLARAPKYASKAVPHYNRLDSYKVIEQPITSETAMKKVE 77
Query: 89 DNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVAN 148
D N LVF V ++A+K +IK AVK++YE+ KVNTL+RP+GTKKAYVRLT DYDALD+AN
Sbjct: 78 DGNILVFQVSMKANKYQIKKAVKELYEVDVLKVNTLVRPNGTKKAYVRLTADYDALDIAN 137
Query: 149 KIGII 153
+IG I
Sbjct: 138 RIGYI 142
>sp|O74391|RL25B_SCHPO 60S ribosomal protein L25-B OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rpl25b PE=3 SV=1
Length = 141
Score = 149 bits (376), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 77/139 (55%), Positives = 102/139 (73%), Gaps = 1/139 (0%)
Query: 15 AQATKVAKAVKSGPTFKKKAKKMRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQIL 74
+A K V+ G K A+K+RTS TF RPKTL+ R PKY R S P ++LD Y+I+
Sbjct: 4 GKAKGAQKTVQKG-IHNKVARKVRTSTTFRRPKTLELARKPKYARKSVPHASRLDEYKII 62
Query: 75 KYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKKAY 134
P+ +ESAMKKIED+NTLVF V ++A+K IK+AVKK+Y + K+NTLIRP+GTKKA+
Sbjct: 63 VNPINSESAMKKIEDDNTLVFHVHLKANKFTIKNAVKKLYSVDAVKINTLIRPNGTKKAF 122
Query: 135 VRLTPDYDALDVANKIGII 153
V+L+ D DALDVAN+IG +
Sbjct: 123 VKLSADADALDVANRIGFL 141
>sp|Q20647|R23A2_CAEEL 60S ribosomal protein L23a 2 OS=Caenorhabditis elegans GN=rpl-25.2
PE=3 SV=1
Length = 146
Score = 149 bits (375), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 87/153 (56%), Positives = 104/153 (67%), Gaps = 7/153 (4%)
Query: 1 MAPKVDSSKKGDPKAQATKVAKAVKSGPTFKKKAKKMRTSVTFHRPKTLKKDRNPKYPRI 60
MAP S+K G +A + KAV G + K +RTSV F RPKTL R P+Y R
Sbjct: 1 MAP--SSNKVG----KAIQAKKAVVKGSKTNVR-KNVRTSVHFRRPKTLVTARAPRYARK 53
Query: 61 SAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKK 120
SAP R+KLD + ++K P TTES+MKKIED+NTLVFIVD +A+K IK AV +Y ++ K
Sbjct: 54 SAPARDKLDSFAVIKAPHTTESSMKKIEDHNTLVFIVDEKANKHHIKRAVHALYNVKAVK 113
Query: 121 VNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 153
VNTLI P KKAYVRL DYDALDVANKIG I
Sbjct: 114 VNTLITPLQQKKAYVRLASDYDALDVANKIGFI 146
>sp|Q10330|RL25A_SCHPO 60S ribosomal protein L25-A OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rpl25a PE=1 SV=1
Length = 141
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 77/139 (55%), Positives = 102/139 (73%), Gaps = 1/139 (0%)
Query: 15 AQATKVAKAVKSGPTFKKKAKKMRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQIL 74
A+A K V+ G K AKK+RTS TF RPKTL+ R PKY R S +LD Y+I+
Sbjct: 4 AKAKGAQKTVQKG-IHNKVAKKVRTSTTFRRPKTLQLSRKPKYARKSVAHAPRLDEYKII 62
Query: 75 KYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKKAY 134
P+ +ESAMKKIED+NTLVF V ++A+K IK+AV+K+Y ++ K+NTLIRP+GTKKA+
Sbjct: 63 VNPINSESAMKKIEDDNTLVFHVHLKANKFTIKEAVRKLYSVEPVKINTLIRPNGTKKAF 122
Query: 135 VRLTPDYDALDVANKIGII 153
V+L+ D DALDVAN+IG +
Sbjct: 123 VKLSADADALDVANRIGFL 141
>sp|Q54BQ3|RL23A_DICDI 60S ribosomal protein L23a OS=Dictyostelium discoideum GN=rpl23a
PE=1 SV=1
Length = 169
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 67/122 (54%), Positives = 91/122 (74%)
Query: 32 KKAKKMRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNN 91
K +K+RTSV F RP TL + P YPR S K+D ++ILK PLTTESA +KIE +N
Sbjct: 48 KSTRKVRTSVIFRRPVTLNNPKKPAYPRRSVNKITKMDQFRILKAPLTTESATQKIEGSN 107
Query: 92 TLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIG 151
T+ F+VD+ A+K ++ DAV KMY+++ K+VNTLI P G KKA+V L+P+++A DVANKIG
Sbjct: 108 TITFMVDMFANKSQVADAVAKMYDVKVKRVNTLITPRGEKKAFVTLSPEFEAADVANKIG 167
Query: 152 II 153
+I
Sbjct: 168 LI 169
>sp|P41165|RL23A_TRYBB 60S ribosomal protein L23a OS=Trypanosoma brucei brucei GN=RPL23A
PE=2 SV=1
Length = 164
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/112 (58%), Positives = 88/112 (78%), Gaps = 6/112 (5%)
Query: 42 TFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRA 101
T+ RP T+K N +SA +NK D ++I++YPLTT+ AMKKIE+NNTL FIVD RA
Sbjct: 59 TYRRPATVKPSSN-----VSAI-KNKWDAFRIIRYPLTTDKAMKKIEENNTLTFIVDSRA 112
Query: 102 DKRKIKDAVKKMYEIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 153
+K +IK A++K+Y+++T KVNTLIRPDG KKAY+RL+ YDALD ANK+G++
Sbjct: 113 NKTEIKKAIRKLYQVKTVKVNTLIRPDGLKKAYIRLSASYDALDTANKMGLV 164
>sp|P0DJ57|RL23A_TETTS 60S ribosomal protein L23A OS=Tetrahymena thermophila (strain
SB210) GN=RPL23A PE=1 SV=1
Length = 150
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/141 (46%), Positives = 89/141 (63%), Gaps = 5/141 (3%)
Query: 16 QATKVAKAVKSGPTFKKKAKKMRTSVTFHRPKTLKKDRNPKYPR-ISAPPR--NKLDHYQ 72
+A AK K G + K K T V F RPKTL+ + PKY R + A + LD++
Sbjct: 12 KAKNTAKVAKKGSSITKH--KTYTGVRFFRPKTLQLAKAPKYSRTVRAHLKVSGHLDNHS 69
Query: 73 ILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKK 132
++K PLTTE AMKK+ED NT+VF V R+ K +IK A +K+Y ++ + VNTL G KK
Sbjct: 70 VVKTPLTTEKAMKKMEDENTMVFYVHNRSTKPQIKSAFEKLYNVKVRSVNTLNTITGNKK 129
Query: 133 AYVRLTPDYDALDVANKIGII 153
AY+RL D D+L +ANKIG+I
Sbjct: 130 AYIRLAADSDSLTLANKIGLI 150
>sp|Q9LWB5|RK23_SPIOL 50S ribosomal protein L23, chloroplastic OS=Spinacia oleracea
GN=RPL23 PE=1 SV=1
Length = 198
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 49/90 (54%), Positives = 69/90 (76%)
Query: 64 PRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNT 123
PR LD YQIL+ P+ TE+A+K I D N+L+F VD+RADK+ I++A+ + ++ +KVNT
Sbjct: 105 PRRILDVYQILQSPIITEAAIKNIADENSLLFTVDVRADKKMIREAISNFFGVKVRKVNT 164
Query: 124 LIRPDGTKKAYVRLTPDYDALDVANKIGII 153
LIRPDGTKKAY+ L +Y+A ++A KIGI
Sbjct: 165 LIRPDGTKKAYIMLNKEYNASELAKKIGIF 194
>sp|Q8U000|RL23_PYRFU 50S ribosomal protein L23P OS=Pyrococcus furiosus (strain ATCC
43587 / DSM 3638 / JCM 8422 / Vc1) GN=rpl23p PE=1 SV=2
Length = 86
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 61/86 (70%)
Query: 68 LDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRP 127
+D Y+++ P+ TE A+ IE N L FIVD RA K+ IK AV++++ ++ +KVNTLI P
Sbjct: 1 MDPYKVIIRPVVTEKAISLIEKENKLTFIVDRRATKQDIKRAVEEIFNVKVEKVNTLITP 60
Query: 128 DGTKKAYVRLTPDYDALDVANKIGII 153
G KKAYV+L P+Y A +VA ++G+
Sbjct: 61 RGEKKAYVKLKPEYSASEVAARLGLF 86
>sp|Q5JDH1|RL23_PYRKO 50S ribosomal protein L23P OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=rpl23p PE=3 SV=1
Length = 86
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 60/86 (69%)
Query: 68 LDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRP 127
+D Y+++ PL TE A+ IE N L FIVD RA K+ IK AV++M+ ++ KVNTL+
Sbjct: 1 MDPYKVIIRPLVTEKAVSLIERENKLTFIVDRRATKQDIKRAVEEMFNVKVAKVNTLVTM 60
Query: 128 DGTKKAYVRLTPDYDALDVANKIGII 153
G KKAYV+L P+YDA ++A ++G+
Sbjct: 61 KGEKKAYVKLKPEYDASEIAARLGLF 86
>sp|B6YSL5|RL23_THEON 50S ribosomal protein L23P OS=Thermococcus onnurineus (strain NA1)
GN=rpl23p PE=3 SV=1
Length = 86
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 61/86 (70%)
Query: 68 LDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRP 127
+D Y+++ P+ TE A+ IE+ N L FIVD RA K+ IK AV+ M++++ +KVNTLI
Sbjct: 1 MDPYKVIIRPVVTEKAVAMIENENKLTFIVDRRATKQDIKRAVEAMFDVKVEKVNTLITM 60
Query: 128 DGTKKAYVRLTPDYDALDVANKIGII 153
G KKAYV+L P+Y A ++A +IG+
Sbjct: 61 RGEKKAYVKLKPEYSASEIAARIGLF 86
>sp|P54016|RL23_METJA 50S ribosomal protein L23P OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=rpl23p PE=3 SV=1
Length = 86
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 60/85 (70%)
Query: 68 LDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRP 127
+D + ++K P+ TE ++ IE+ N LVF VD RA K+ IK A+K++++++ +KVNTLI P
Sbjct: 1 MDAFDVIKAPVVTEKTVRMIEEENKLVFYVDRRATKQDIKRAMKELFDVEVEKVNTLITP 60
Query: 128 DGTKKAYVRLTPDYDALDVANKIGI 152
G KKAYV+L YDA +A +GI
Sbjct: 61 KGEKKAYVKLKEGYDASKIAASLGI 85
>sp|A6UV66|RL23_META3 50S ribosomal protein L23P OS=Methanococcus aeolicus (strain
Nankai-3 / ATCC BAA-1280) GN=rpl23p PE=3 SV=1
Length = 86
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 61/85 (71%)
Query: 68 LDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRP 127
+D + ++K P+ +E MK IE+ N LVF +D +A K +K+AVK++++++ K +NTLI P
Sbjct: 1 MDAFDVIKMPIISEKTMKLIEEENKLVFYIDKKATKTDVKNAVKELFDVEVKDLNTLITP 60
Query: 128 DGTKKAYVRLTPDYDALDVANKIGI 152
G KKAY++L +YDA +VA +GI
Sbjct: 61 KGKKKAYIKLKDEYDAGEVAANLGI 85
>sp|Q8TY92|RL23_METKA 50S ribosomal protein L23P OS=Methanopyrus kandleri (strain AV19 /
DSM 6324 / JCM 9639 / NBRC 100938) GN=rpl23p PE=3 SV=1
Length = 95
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 60/85 (70%)
Query: 69 DHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPD 128
D + +L YP+ TE AM+ +E N L FIV A+K IK AV+++++++ +KVNTLI P
Sbjct: 11 DPHDVLLYPVATEKAMRLMEAENKLTFIVRRDANKPLIKKAVEELFDVEVEKVNTLITPT 70
Query: 129 GTKKAYVRLTPDYDALDVANKIGII 153
G KKAYV+L P+Y A DVA +GI+
Sbjct: 71 GEKKAYVKLKPEYRAEDVAVDLGIL 95
>sp|O74095|RL23_PYRHO 50S ribosomal protein L23P OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=rpl23p PE=3 SV=1
Length = 86
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 60/85 (70%)
Query: 68 LDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRP 127
+D Y+++ P+ TE A+ IE N L FIVD RA K IK A+++++ ++ +KVNTLI P
Sbjct: 1 MDPYKVIIRPVVTEKAISLIEKENKLTFIVDRRATKTDIKKAIEEIFNVKVEKVNTLITP 60
Query: 128 DGTKKAYVRLTPDYDALDVANKIGI 152
G KKAYV+L P+Y A ++A ++G+
Sbjct: 61 KGEKKAYVKLKPEYSASEIAARLGL 85
>sp|C5A284|RL23_THEGJ 50S ribosomal protein L23P OS=Thermococcus gammatolerans (strain
DSM 15229 / JCM 11827 / EJ3) GN=rpl23p PE=3 SV=1
Length = 86
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 61/86 (70%)
Query: 68 LDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRP 127
+D Y+++ PL TE A+ IE N L FIVD +A K+ IK AV++M+ ++ +KVNTLI
Sbjct: 1 MDPYKVIIRPLVTEKAVSLIEKENKLTFIVDRKATKQDIKRAVEEMFNVKVEKVNTLITM 60
Query: 128 DGTKKAYVRLTPDYDALDVANKIGII 153
G KKAYV+L P+Y+A ++A ++G+
Sbjct: 61 KGEKKAYVKLRPEYNASEIAARLGLF 86
>sp|Q9V1T7|RL23_PYRAB 50S ribosomal protein L23P OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=rpl23p PE=3 SV=1
Length = 86
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 61/85 (71%)
Query: 68 LDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRP 127
+D Y+++ P+ T+ A+ IE N L FIVD RA K+ IK A+++++ ++ +KVNTLI P
Sbjct: 1 MDPYKVIIRPVITDKAISLIEKENKLTFIVDRRATKQDIKRAIEEIFNVKVEKVNTLITP 60
Query: 128 DGTKKAYVRLTPDYDALDVANKIGI 152
G KKAYV+L P+Y A ++A ++G+
Sbjct: 61 KGEKKAYVKLKPEYSASEIAARLGL 85
>sp|C6A161|RL23_THESM 50S ribosomal protein L23P OS=Thermococcus sibiricus (strain MM 739
/ DSM 12597) GN=rpl23p PE=3 SV=1
Length = 86
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 57/85 (67%)
Query: 68 LDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRP 127
+D Y+++ P+ TE A+ +E N L FIVD RA K IK AV+ +YE++ KVN +I
Sbjct: 1 MDPYKVIVRPVVTEKAISMVERENKLTFIVDKRATKPDIKKAVETVYEVKVDKVNIVITM 60
Query: 128 DGTKKAYVRLTPDYDALDVANKIGI 152
G KKAYV+L P+Y A +VA +IG+
Sbjct: 61 KGEKKAYVKLKPEYSASEVAARIGL 85
>sp|Q4JB42|RL23_SULAC 50S ribosomal protein L23P OS=Sulfolobus acidocaldarius (strain
ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB
11770) GN=rpl23p PE=3 SV=1
Length = 82
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 57/81 (70%)
Query: 73 ILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKK 132
I+K L TE A+K IE NTL IV+ K+ IK+ V+K++ ++ +K+NTLI P G KK
Sbjct: 2 IIKEFLATEKAVKLIESQNTLTIIVNRNTTKKDIKNEVEKLFSVKVEKINTLITPKGEKK 61
Query: 133 AYVRLTPDYDALDVANKIGII 153
AYV+L +Y A DVA+K+G++
Sbjct: 62 AYVKLKQEYKASDVAHKLGML 82
>sp|P10143|RL23_METVS 50S ribosomal protein L23P OS=Methanococcus vannielii (strain SB /
ATCC 35089 / DSM 1224) GN=rpl23p PE=1 SV=1
Length = 86
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 58/85 (68%)
Query: 68 LDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRP 127
+D + ++K P+ +E MK IE+ N LVF V+ +A K IK+A+K+++ + +VNT I P
Sbjct: 1 MDAFDVIKTPIVSEKTMKLIEEENRLVFYVERKATKEDIKEAIKQLFNAEVAEVNTNITP 60
Query: 128 DGTKKAYVRLTPDYDALDVANKIGI 152
G KKAY++L +Y+A +VA +GI
Sbjct: 61 KGQKKAYIKLKDEYNAGEVAASLGI 85
>sp|P12732|RL23_HALMA 50S ribosomal protein L23P OS=Haloarcula marismortui (strain ATCC
43049 / DSM 3752 / JCM 8966 / VKM B-1809) GN=rpl23p PE=1
SV=2
Length = 85
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 55/83 (66%)
Query: 71 YQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGT 130
+ ++K+P TE AM ++ N L F VD RA K ++ DAV++ Y++ ++VNT DG
Sbjct: 3 WDVIKHPHVTEKAMNDMDFQNKLQFAVDDRASKGEVADAVEEQYDVTVEQVNTQNTMDGE 62
Query: 131 KKAYVRLTPDYDALDVANKIGII 153
KKA VRL+ D DA +VA++IG+
Sbjct: 63 KKAVVRLSEDDDAQEVASRIGVF 85
>sp|A3DNA6|RL23_STAMF 50S ribosomal protein L23P OS=Staphylothermus marinus (strain ATCC
43588 / DSM 3639 / F1) GN=rpl23p PE=3 SV=1
Length = 91
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 58/83 (69%)
Query: 71 YQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGT 130
Y+I+ P+ +E A+ I+ NTL FIVD A K+ IKDAV+ ++ ++ KV TLI G
Sbjct: 9 YKIIIRPVHSEKALNLIDKENTLTFIVDRNASKKDIKDAVELVFGVKVLKVRTLITSRGE 68
Query: 131 KKAYVRLTPDYDALDVANKIGII 153
KKAYV+L P++ A ++A+++G+I
Sbjct: 69 KKAYVKLAPEHRASEIASQLGLI 91
>sp|Q9YFM0|RL23_AERPE 50S ribosomal protein L23P OS=Aeropyrum pernix (strain ATCC 700893
/ DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=rpl23p
PE=3 SV=2
Length = 86
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 51/74 (68%)
Query: 80 TESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKKAYVRLTP 139
TE + +E+ NTL FIV A K +K AV++++ ++ +KV TLI P G KKAYV+L P
Sbjct: 13 TEKTTRMLEEENTLTFIVRREATKNDVKRAVEQLFGVKVEKVRTLITPRGYKKAYVKLAP 72
Query: 140 DYDALDVANKIGII 153
+Y ALDVA K+G +
Sbjct: 73 EYKALDVATKLGAV 86
>sp|Q975I3|RL23_SULTO 50S ribosomal protein L23P OS=Sulfolobus tokodaii (strain DSM 16993
/ JCM 10545 / NBRC 100140 / 7) GN=rpl23p PE=3 SV=1
Length = 82
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 56/82 (68%)
Query: 72 QILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTK 131
I+K LTTE A+K IE NTL IV+ A K IK ++KM+ ++ KVNTLI G K
Sbjct: 1 MIIKEFLTTEKAIKLIESQNTLTVIVNKEATKADIKREIEKMFNVKVDKVNTLITIRGEK 60
Query: 132 KAYVRLTPDYDALDVANKIGII 153
KAYV+L +++A D+A+++GI+
Sbjct: 61 KAYVKLKKEFNASDIAHRLGIL 82
>sp|Q06842|RL23_HALSA 50S ribosomal protein L23P OS=Halobacterium salinarum (strain ATCC
700922 / JCM 11081 / NRC-1) GN=rpl23p PE=1 SV=3
Length = 84
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 54/80 (67%)
Query: 73 ILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKK 132
I+ YPL TE AM +++ N L FIVDI A K +I+D V+ Y++ VNT I P+ KK
Sbjct: 4 IIDYPLVTEKAMDEMDFQNKLQFIVDIDAAKPEIRDVVESEYDVTVVDVNTQITPEAEKK 63
Query: 133 AYVRLTPDYDALDVANKIGI 152
A V+L+ + DA DVA++IG+
Sbjct: 64 ATVKLSAEDDAQDVASRIGV 83
>sp|O28356|RL23_ARCFU 50S ribosomal protein L23P OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=rpl23p PE=3 SV=1
Length = 83
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
Query: 72 QILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTK 131
++K L TE ++ ++E N L IVD+RA K IK ++K++ ++ ++VNTLI P G K
Sbjct: 3 MLIKCFLVTEKSVAELE-KNVLTAIVDMRARKEHIKKEIEKLFNVEVERVNTLITPKGEK 61
Query: 132 KAYVRLTPDYDALDVANKIGI 152
KAY++L PDY A ++ +K+G+
Sbjct: 62 KAYIKLKPDYSAEEILSKLGV 82
>sp|A6VHD4|RL23_METM7 50S ribosomal protein L23P OS=Methanococcus maripaludis (strain C7
/ ATCC BAA-1331) GN=rpl23p PE=3 SV=1
Length = 86
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 56/85 (65%)
Query: 68 LDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRP 127
+D + ++K P+ +E MK IE+ N LVF V+ +A K I+ A+K++++ + +NT I P
Sbjct: 1 MDAFDVIKTPIVSEKTMKLIEEENRLVFYVERKATKADIRAAIKELFDAEVADINTSITP 60
Query: 128 DGTKKAYVRLTPDYDALDVANKIGI 152
G KKAY+ L +Y+A +VA +GI
Sbjct: 61 KGKKKAYITLKSEYNAGEVAASLGI 85
>sp|A4FVY0|RL23_METM5 50S ribosomal protein L23P OS=Methanococcus maripaludis (strain C5
/ ATCC BAA-1333) GN=rpl23p PE=3 SV=1
Length = 86
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 56/85 (65%)
Query: 68 LDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRP 127
+D + ++K P+ +E MK IE+ N LVF V+ +A K I+ A+K++++ + +NT I P
Sbjct: 1 MDAFDVIKTPIVSEKTMKLIEEENRLVFYVERKATKADIRAAIKELFDAEVADINTSITP 60
Query: 128 DGTKKAYVRLTPDYDALDVANKIGI 152
G KKAY+ L +Y+A +VA +GI
Sbjct: 61 KGKKKAYITLKAEYNAGEVAASLGI 85
>sp|Q8ZW50|RL23_PYRAE 50S ribosomal protein L23P OS=Pyrobaculum aerophilum (strain ATCC
51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827)
GN=rpl23p PE=3 SV=1
Length = 81
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 58/81 (71%)
Query: 73 ILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKK 132
++K + TE A++ E N + IVD A K++I + V+++Y ++ +KVNTLI P G KK
Sbjct: 1 MIKRIVVTEKALRLAEKENKITLIVDRGATKKQIAEEVERLYNVKVEKVNTLITPRGEKK 60
Query: 133 AYVRLTPDYDALDVANKIGII 153
AYV+LT +++A+D+ +K+G++
Sbjct: 61 AYVKLTKEHNAMDLLSKLGVL 81
>sp|A9A9B6|RL23_METM6 50S ribosomal protein L23P OS=Methanococcus maripaludis (strain C6
/ ATCC BAA-1332) GN=rpl23p PE=3 SV=1
Length = 86
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 55/85 (64%)
Query: 68 LDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRP 127
+D + ++K P+ +E MK IE+ N LVF V+ +A K I A+K++++ + +NT I P
Sbjct: 1 MDAFDVIKTPIVSEKTMKLIEEENRLVFYVERKATKADISAAIKELFDAEVADINTSITP 60
Query: 128 DGTKKAYVRLTPDYDALDVANKIGI 152
G KKAY+ L +Y+A +VA +GI
Sbjct: 61 KGKKKAYITLKAEYNAGEVAASLGI 85
>sp|Q6LX09|RL23_METMP 50S ribosomal protein L23P OS=Methanococcus maripaludis (strain S2
/ LL) GN=rpl23p PE=3 SV=1
Length = 86
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 56/85 (65%)
Query: 68 LDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRP 127
+D + ++K P+ +E MK IE+ N LVF V+ +A K ++ A+K++++ + +NT I P
Sbjct: 1 MDAFDVIKTPIVSEKTMKLIEEENRLVFYVERKATKADVRAAIKELFDAEVADINTSITP 60
Query: 128 DGTKKAYVRLTPDYDALDVANKIGI 152
G KKAY+ L +Y+A +VA +GI
Sbjct: 61 KGKKKAYITLKDEYNAGEVAASLGI 85
>sp|Q18GF1|RL23_HALWD 50S ribosomal protein L23P OS=Haloquadratum walsbyi (strain DSM
16790) GN=rpl23p PE=3 SV=1
Length = 84
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 52/81 (64%)
Query: 73 ILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKK 132
+++YPL TE AM +++ +N L FIVD A K +I++ ++ YEI T I P KK
Sbjct: 4 LIEYPLVTEKAMDEMDFDNKLQFIVDTDATKDEIENEIESRYEITIIDTKTQITPRAKKK 63
Query: 133 AYVRLTPDYDALDVANKIGII 153
A VRL+ D DA D+A++IG+
Sbjct: 64 ATVRLSDDDDAQDIASRIGVF 84
>sp|Q3IMY6|RL23_NATPD 50S ribosomal protein L23P OS=Natronomonas pharaonis (strain DSM
2160 / ATCC 35678) GN=rpl23p PE=3 SV=1
Length = 82
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 49/80 (61%)
Query: 74 LKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKKA 133
+K+PL TE AM ++ N L F+ A K I AV+ ++++ +NT +R DG KKA
Sbjct: 3 IKHPLVTEKAMNDMDFENKLQFVCHPEATKGDIAAAVESQFDVEVDSINTQVRMDGDKKA 62
Query: 134 YVRLTPDYDALDVANKIGII 153
V L+ D DA +VA++IG+
Sbjct: 63 IVELSADDDAQEVASRIGVF 82
>sp|O26112|RL23_METTH 50S ribosomal protein L23P OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=rpl23p PE=3 SV=2
Length = 86
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 55/86 (63%)
Query: 68 LDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRP 127
+D Y ++ P TE +M I+ NN L F+V ++ K+ ++ A ++++ ++ ++VNT + P
Sbjct: 1 MDPYAVIMKPHVTEKSMNLIDQNNELAFVVMRKSTKKDVRRAFEELFAVKVERVNTQVTP 60
Query: 128 DGTKKAYVRLTPDYDALDVANKIGII 153
G K AY++L ++ A D+A K+G+
Sbjct: 61 RGQKIAYIKLAKEHSAEDIAVKLGVF 86
>sp|Q97ZQ4|RL23_SULSO 50S ribosomal protein L23P OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=rpl23p PE=3 SV=1
Length = 81
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 54/81 (66%)
Query: 73 ILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKK 132
+++ L TE A+K IE NTL IVD K IK +V++++ ++ KVN +I P G KK
Sbjct: 1 MIQMALATEKALKLIESYNTLTLIVDKSDTKDDIKKSVERLFNVKVVKVNVVITPQGYKK 60
Query: 133 AYVRLTPDYDALDVANKIGII 153
AYV+L P+Y A D+A+K+GI
Sbjct: 61 AYVKLAPEYKASDIAHKLGIF 81
>sp|A5UL87|RL23_METS3 50S ribosomal protein L23P OS=Methanobrevibacter smithii (strain PS
/ ATCC 35061 / DSM 861) GN=rpl23p PE=3 SV=1
Length = 86
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 51/86 (59%)
Query: 68 LDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRP 127
+D Y I+ P TE M I+ NN + F+V A+K +IK A +++YE + +V T I P
Sbjct: 1 MDSYSIIIKPHVTEKTMNLIDKNNEITFVVKRDANKGQIKRAFEELYEEKVARVTTHITP 60
Query: 128 DGTKKAYVRLTPDYDALDVANKIGII 153
G K A+++L + A ++A KIG+
Sbjct: 61 RGNKVAFIKLVEEEMAEELAVKIGVF 86
>sp|B5FG11|RL23_VIBFM 50S ribosomal protein L23 OS=Vibrio fischeri (strain MJ11) GN=rplW
PE=3 SV=1
Length = 100
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 44/66 (66%)
Query: 71 YQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGT 130
++L+ PL +E A E NNT+VF V I A K++IK AV+K++E++ K VNTLI T
Sbjct: 8 LKVLRGPLISEKATMAAEGNNTIVFKVAINATKKEIKAAVEKLFEVEVKSVNTLITKGKT 67
Query: 131 KKAYVR 136
K+ +R
Sbjct: 68 KRQGLR 73
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.130 0.362
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,792,841
Number of Sequences: 539616
Number of extensions: 1999642
Number of successful extensions: 6223
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 432
Number of HSP's successfully gapped in prelim test: 92
Number of HSP's that attempted gapping in prelim test: 5723
Number of HSP's gapped (non-prelim): 549
length of query: 153
length of database: 191,569,459
effective HSP length: 107
effective length of query: 46
effective length of database: 133,830,547
effective search space: 6156205162
effective search space used: 6156205162
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 56 (26.2 bits)