Query 031739
Match_columns 153
No_of_seqs 151 out of 1105
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 07:02:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/031739.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/031739hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpr_A Ubiquitin-conjugating e 100.0 9.1E-55 3.1E-59 313.3 19.5 150 3-152 2-151 (151)
2 2c2v_B Ubiquitin-conjugating e 100.0 1.8E-54 6.2E-59 312.6 17.1 151 2-152 2-152 (154)
3 1z2u_A Ubiquitin-conjugating e 100.0 1.4E-53 4.7E-58 306.9 18.9 149 3-151 2-150 (150)
4 1ayz_A UBC2, ubiquitin-conjuga 100.0 1.2E-53 4.2E-58 312.3 18.7 149 3-151 2-150 (169)
5 2r0j_A Ubiquitin carrier prote 100.0 9.7E-54 3.3E-58 307.3 17.8 147 6-152 2-148 (149)
6 1zdn_A Ubiquitin-conjugating e 100.0 7.8E-54 2.7E-58 310.5 17.2 148 3-150 11-158 (158)
7 2ayv_A Ubiquitin-conjugating e 100.0 3.1E-53 1.1E-57 309.4 20.3 147 4-150 20-166 (166)
8 2aak_A UBC1, ubiquitin conjuga 100.0 2.1E-53 7.3E-58 306.5 19.0 150 3-152 2-151 (152)
9 2c4o_A Ubiquitin-conjugating e 100.0 3.5E-53 1.2E-57 308.9 19.4 147 5-151 19-165 (165)
10 1jat_A Ubiquitin-conjugating e 100.0 1.7E-53 5.8E-58 307.9 16.4 150 3-152 3-152 (155)
11 2e2c_A Ubiquitin conjugating e 100.0 6.3E-53 2.2E-57 305.2 19.0 149 3-152 7-155 (156)
12 1yh2_A HSPC150 protein similar 100.0 8.1E-53 2.8E-57 308.1 19.7 150 3-152 2-155 (169)
13 1fxt_A Ubiquitin-conjugating e 100.0 1.9E-53 6.7E-58 305.8 15.8 146 6-151 2-149 (149)
14 2bep_A Ubiquitin-conjugating e 100.0 8.4E-53 2.9E-57 305.4 19.1 151 2-152 5-159 (159)
15 3h8k_A Ubiquitin-conjugating e 100.0 2.4E-52 8.2E-57 304.4 20.0 148 4-151 2-163 (164)
16 2ucz_A UBC7, ubiquitin conjuga 100.0 1.3E-52 4.3E-57 306.1 18.4 150 1-151 1-164 (165)
17 3rcz_B SUMO-conjugating enzyme 100.0 1.2E-52 4.2E-57 305.4 17.8 149 3-151 8-163 (163)
18 2gjd_A Ubiquitin-conjugating e 100.0 2.3E-52 7.9E-57 302.5 17.6 149 3-151 2-157 (157)
19 2f4z_A Tgtwinscan_2721 - E2 do 100.0 3.6E-52 1.2E-56 310.0 18.6 148 4-151 31-192 (193)
20 3k9o_A Ubiquitin-conjugating e 100.0 6.4E-52 2.2E-56 311.0 19.7 150 3-152 3-156 (201)
21 3bzh_A Ubiquitin-conjugating e 100.0 8.6E-52 2.9E-56 308.3 20.0 147 5-151 48-194 (194)
22 2pwq_A Ubiquitin conjugating e 100.0 3.5E-52 1.2E-56 314.7 17.8 150 3-152 21-171 (216)
23 2grr_A Ubiquitin-conjugating e 100.0 3.8E-52 1.3E-56 302.5 16.9 151 2-152 4-161 (161)
24 1wzv_A Ubiquitin-conjugating e 100.0 3E-51 1E-55 296.1 18.1 147 5-152 4-152 (155)
25 1i7k_A Ubiquitin-conjugating e 100.0 1.6E-51 5.5E-56 303.3 16.3 149 3-152 28-176 (179)
26 3rz3_A Ubiquitin-conjugating e 100.0 5.9E-51 2E-55 301.6 18.3 151 1-151 3-173 (183)
27 3e46_A Ubiquitin-conjugating e 100.0 1.3E-50 4.5E-55 312.2 19.0 150 3-152 55-208 (253)
28 3fn1_B NEDD8-conjugating enzym 100.0 1.3E-50 4.6E-55 295.9 18.0 147 4-151 13-167 (167)
29 1tte_A Ubiquitin-conjugating e 100.0 2.3E-51 7.8E-56 310.0 13.8 148 5-152 2-151 (215)
30 1yrv_A Ubiquitin-conjugating l 100.0 2.7E-50 9.2E-55 294.5 15.1 145 3-148 21-168 (169)
31 2onu_A Ubiquitin-conjugating e 100.0 7.8E-51 2.7E-55 293.0 11.8 145 5-152 2-148 (152)
32 2y9m_A Ubiquitin-conjugating e 100.0 1.5E-49 5.2E-54 291.5 18.1 150 2-151 3-168 (172)
33 2awf_A Ubiquitin-conjugating e 100.0 6.2E-50 2.1E-54 293.5 15.9 143 3-145 15-172 (172)
34 2z5d_A Ubiquitin-conjugating e 100.0 3.3E-50 1.1E-54 296.1 12.9 143 5-151 25-169 (179)
35 1c4z_D UBCH7, ubiquitin conjug 100.0 5.8E-50 2E-54 289.1 11.7 146 6-152 3-150 (154)
36 1y8x_A Ubiquitin-conjugating e 100.0 1.3E-48 4.5E-53 283.5 17.4 142 4-148 5-147 (160)
37 1yf9_A Ubiquitin carrier prote 100.0 5.4E-49 1.8E-53 288.1 14.4 143 5-151 12-156 (171)
38 4ddg_A Ubiquitin-conjugating e 100.0 2.3E-48 7.8E-53 317.5 18.4 149 5-153 3-151 (399)
39 2nvu_C NEDD8-conjugating enzym 100.0 3E-48 1E-52 286.3 16.9 142 4-148 25-167 (180)
40 3o2u_A NEDD8-conjugating enzym 100.0 1.1E-47 3.9E-52 285.4 15.7 145 4-151 28-179 (190)
41 4ds2_A Ubiquitin-conjugating e 100.0 3.1E-46 1.1E-50 272.8 13.1 142 3-144 6-164 (167)
42 3ceg_A Baculoviral IAP repeat- 100.0 5.7E-44 1.9E-48 282.4 14.4 150 2-151 73-243 (323)
43 2q0v_A Ubiquitin-conjugating e 100.0 3.3E-44 1.1E-48 259.1 10.5 131 3-134 19-156 (156)
44 1jat_B Ubiquitin-conjugating e 100.0 3.8E-44 1.3E-48 254.4 7.5 130 1-131 2-138 (138)
45 2fo3_A Ubiquitin-conjugating e 100.0 8.8E-43 3E-47 243.5 14.2 117 4-120 5-122 (125)
46 2h2y_A Ubiquitin-conjugating e 100.0 5.5E-42 1.9E-46 242.6 16.1 116 4-119 19-135 (136)
47 2a4d_A Ubiquitin-conjugating e 100.0 2.5E-42 8.4E-47 250.0 12.6 125 4-128 24-156 (160)
48 2hlw_A Ubiquitin-conjugating e 100.0 1E-41 3.5E-46 249.1 10.1 125 4-128 34-166 (170)
49 2a7l_A Hypothetical ubiquitin- 100.0 5.1E-41 1.7E-45 237.4 13.1 109 7-115 24-136 (136)
50 2f4w_A Ubiquitin-conjugating e 100.0 4.6E-39 1.6E-43 238.5 16.0 117 4-122 13-132 (187)
51 1zuo_A Hypothetical protein LO 100.0 1.1E-40 3.9E-45 246.8 3.4 141 2-150 24-181 (186)
52 2z6o_A UFM1-conjugating enzyme 99.9 2.1E-29 7.3E-34 180.6 1.8 113 7-133 34-161 (172)
53 3r3q_A Suppressor protein STP2 99.8 2.2E-20 7.7E-25 134.7 10.0 114 7-121 30-161 (162)
54 3kpa_A Probable ubiquitin fold 99.8 6.1E-20 2.1E-24 129.0 0.3 96 6-107 35-145 (168)
55 3obq_A Tumor susceptibility ge 99.6 7.5E-15 2.6E-19 104.1 7.0 80 31-116 50-138 (146)
56 2ebm_A RWD domain-containing p 97.1 0.008 2.7E-07 40.7 10.3 68 6-75 11-78 (128)
57 2day_A Ring finger protein 25; 96.6 0.018 6.3E-07 38.8 8.8 72 5-76 8-83 (128)
58 2yz0_A Serine/threonine-protei 96.3 0.054 1.8E-06 37.0 10.1 67 8-75 13-85 (138)
59 2daw_A RWD domain containing p 96.0 0.056 1.9E-06 37.9 9.1 23 53-75 76-98 (154)
60 3zqs_A E3 ubiquitin-protein li 95.2 0.26 8.7E-06 35.8 10.0 84 8-115 4-87 (186)
61 2ebk_A RWD domain-containing p 95.0 0.13 4.3E-06 34.7 7.6 68 6-74 8-78 (128)
62 1ukx_A GCN2, GCN2 EIF2alpha ki 93.7 0.53 1.8E-05 31.8 8.5 69 6-75 11-86 (137)
63 2cwb_A Chimera of immunoglobul 93.6 0.012 4.3E-07 39.0 0.0 38 114-151 18-55 (108)
64 2dax_A Protein C21ORF6; RWD do 91.5 0.4 1.4E-05 33.2 5.6 25 52-76 73-97 (152)
65 3u3c_B Paxillin LD2 peptide; 4 78.2 1.6 5.4E-05 20.5 2.0 21 5-25 5-25 (26)
66 1taf_B TFIID TBP associated fa 45.9 23 0.0008 21.2 3.3 32 122-153 23-54 (70)
67 3s7v_A Major capsid protein VP 37.5 72 0.0025 24.1 5.5 40 48-90 198-239 (277)
68 1sid_A Polyomavirus coat prote 32.8 84 0.0029 24.8 5.4 23 67-89 249-273 (383)
69 1vps_A Polyomavirus VP1 pentam 31.5 1.1E+02 0.0038 23.2 5.7 41 47-90 201-243 (289)
70 3rls_A YAF9, protein AF-9 homo 31.3 1.4E+02 0.0047 21.1 6.5 45 32-78 30-74 (175)
71 3nxg_A Major capsid protein VP 29.9 69 0.0023 24.1 4.3 44 44-90 185-230 (272)
72 4fmh_A VP1; viral capsid prote 29.3 1E+02 0.0034 23.5 5.1 44 44-90 202-247 (289)
73 2bum_A Protocatechuate 3,4-dio 29.3 51 0.0018 23.9 3.5 26 49-74 108-138 (209)
74 2j3t_D Trafficking protein par 28.0 1.1E+02 0.0038 22.4 5.2 44 100-153 163-213 (219)
75 1sva_1 Simian virus 40; virus 27.9 74 0.0025 24.9 4.3 24 67-90 230-255 (361)
76 1h3o_B Transcription initiatio 25.8 79 0.0027 19.1 3.4 43 110-152 11-53 (76)
77 2cu9_A Spcia1, histone chapero 22.7 1.2E+02 0.0042 21.1 4.3 38 33-70 36-86 (161)
78 2f4m_B UV excision repair prot 22.3 80 0.0027 18.2 2.8 20 123-142 37-56 (61)
79 1pve_A HHR23B, UV excision rep 20.0 93 0.0032 18.6 2.8 21 123-143 39-59 (72)
No 1
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=9.1e-55 Score=313.31 Aligned_cols=150 Identities=49% Similarity=0.897 Sum_probs=146.6
Q ss_pred CCchHHHHHHHHHHHhhCCCCCeEEEeCCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccccccce
Q 031739 3 SGNLPRRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNI 82 (153)
Q Consensus 3 ~~~~~kRl~~E~~~l~~~~~~g~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv 82 (153)
+..+.|||++|+++|+++++.|+++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|||||
T Consensus 2 a~~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv 81 (151)
T 4gpr_A 2 AAMAMRRIQKELREIQQDPPCNCSAGPVGDDIFHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVYHPNI 81 (151)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEEcCCCceEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCcccceE
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCceeeccCCCCcCCcCCHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHHHHhcC
Q 031739 83 DKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKEWTRLYASD 152 (153)
Q Consensus 83 ~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 152 (153)
+.+|.||+++|.++|+|+++|++||.+|+++|.+||+++|+|.+||++|++|+++|.++||+|+++||++
T Consensus 82 ~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~d~~~f~~~ar~~~~~ya~p 151 (151)
T 4gpr_A 82 NKNGVICLDILKDQWSPALTLSRVLLSISSLLTDPNPSDPLDPEVANVLRANKKQFEDTAREWTRMYARP 151 (151)
T ss_dssp CTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHCCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCCC
T ss_pred CCCCEEEcccccCCCCCCCcHHHHHHHHHHHhcCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999985
No 2
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.8e-54 Score=312.65 Aligned_cols=151 Identities=75% Similarity=1.312 Sum_probs=145.3
Q ss_pred CCCchHHHHHHHHHHHhhCCCCCeEEEeCCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccccccc
Q 031739 2 ASGNLPRRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPN 81 (153)
Q Consensus 2 ~~~~~~kRl~~E~~~l~~~~~~g~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpn 81 (153)
+|..+.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++||||
T Consensus 2 ~s~~~~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 81 (154)
T 2c2v_B 2 GSAGLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPN 81 (154)
T ss_dssp CSCSCCHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTT
T ss_pred ccHHHHHHHHHHHHHHHhCCCCCEEEEECCCchheEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCcccCc
Confidence 46678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeCCCceeeccCCCCcCCcCCHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHHHHhcC
Q 031739 82 IDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKEWTRLYASD 152 (153)
Q Consensus 82 v~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 152 (153)
|+.+|.||+++|.++|+|+++|++||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||+.
T Consensus 82 v~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~pn~~~p~n~~aa~~~~~d~~~f~~~ar~~~~~~a~~ 152 (154)
T 2c2v_B 82 VDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYAMN 152 (154)
T ss_dssp BCTTCBBCCHHHHTSCCTTCCHHHHHHHHHHHTTSCCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHSSC
T ss_pred CccCCeEEchhccCCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999975
No 3
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=1.4e-53 Score=306.88 Aligned_cols=149 Identities=50% Similarity=0.871 Sum_probs=145.7
Q ss_pred CCchHHHHHHHHHHHhhCCCCCeEEEeCCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccccccce
Q 031739 3 SGNLPRRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNI 82 (153)
Q Consensus 3 ~~~~~kRl~~E~~~l~~~~~~g~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv 82 (153)
|..+.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|||||
T Consensus 2 s~~~~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 81 (150)
T 1z2u_A 2 SHMALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNI 81 (150)
T ss_dssp CCHHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEECCCcceEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCcccCcC
Confidence 55688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCceeeccCCCCcCCcCCHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHHHHhc
Q 031739 83 DKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKEWTRLYAS 151 (153)
Q Consensus 83 ~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 151 (153)
+.+|.||+++|.++|+|++++++||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||+
T Consensus 82 ~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~pn~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 150 (150)
T 1z2u_A 82 NSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRERYNQLAREWTQKYAM 150 (150)
T ss_dssp CTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CCCCeEeeccccCCCCCCCCHHHHHHHHHHHhhCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999999999999999999999999996
No 4
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=1.2e-53 Score=312.29 Aligned_cols=149 Identities=38% Similarity=0.756 Sum_probs=145.6
Q ss_pred CCchHHHHHHHHHHHhhCCCCCeEEEeCCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccccccce
Q 031739 3 SGNLPRRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNI 82 (153)
Q Consensus 3 ~~~~~kRl~~E~~~l~~~~~~g~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv 82 (153)
+..+.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+||||||
T Consensus 2 s~~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HPNI 81 (169)
T 1ayz_A 2 STPARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNV 81 (169)
T ss_dssp CCHHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTB
T ss_pred ChHHHHHHHHHHHHHHhCCCCCEEEEecCCccccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccccCCccCCC
Confidence 34688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCceeeccCCCCcCCcCCHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHHHHhc
Q 031739 83 DKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKEWTRLYAS 151 (153)
Q Consensus 83 ~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 151 (153)
+.+|.||+++|.+.|+|+++|++||.+|++||.+|++++|+|.+||++|++|+++|.++||+|+++||+
T Consensus 82 ~~~G~ICl~iL~~~WsP~~~i~~vL~si~~ll~~Pn~~~P~n~~aa~~~~~d~~~y~~~~r~~~~~~a~ 150 (169)
T 1ayz_A 82 YANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKETVEKSWE 150 (169)
T ss_dssp CTTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEeehhhccCCCCcCcHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHCHHHHHHHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999999999999999999999999999996
No 5
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00 E-value=9.7e-54 Score=307.33 Aligned_cols=147 Identities=69% Similarity=1.214 Sum_probs=144.2
Q ss_pred hHHHHHHHHHHHhhCCCCCeEEEeCCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccccccceeCC
Q 031739 6 LPRRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDKL 85 (153)
Q Consensus 6 ~~kRl~~E~~~l~~~~~~g~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~ 85 (153)
+.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|||||+.+
T Consensus 2 ~~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~ 81 (149)
T 2r0j_A 2 IPRRITKETQNLANEPPPGIMAVPVPENYRHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYHPNIDKL 81 (149)
T ss_dssp CCHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCccCCCCCC
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeeccCCCCcCCcCCHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHHHHhcC
Q 031739 86 GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKEWTRLYASD 152 (153)
Q Consensus 86 G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 152 (153)
|.||+++|.++|+|++++++||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||+.
T Consensus 82 G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 148 (149)
T 2r0j_A 82 GRICLDILKDKWSPALQIRTVLLSIQALLSSPEPDDPLDSKVAEHFKQDKNDAEHVARQWNKIYANN 148 (149)
T ss_dssp CBBCCGGGTTTCCTTSCHHHHHHHHHHHHHSCCTTSCSSCHHHHHHHHCHHHHHHHHHHHHHHHSCC
T ss_pred CEEechhcCCCCCCCCcHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHHccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999985
No 6
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=7.8e-54 Score=310.52 Aligned_cols=148 Identities=37% Similarity=0.711 Sum_probs=144.5
Q ss_pred CCchHHHHHHHHHHHhhCCCCCeEEEeCCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccccccce
Q 031739 3 SGNLPRRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNI 82 (153)
Q Consensus 3 ~~~~~kRl~~E~~~l~~~~~~g~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv 82 (153)
+..+.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|||||
T Consensus 11 s~~~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 90 (158)
T 1zdn_A 11 PPHIIRLVYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNV 90 (158)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTB
T ss_pred CHHHHHHHHHHHHHHHhCCCCCEEEEECCCChhheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEeccCcccCCC
Confidence 34577999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCceeeccCCCCcCCcCCHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHHHHh
Q 031739 83 DKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKEWTRLYA 150 (153)
Q Consensus 83 ~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a 150 (153)
+.+|.||+++|.++|+|++++++||.+|+++|.+|++++|+|.+||++|++|+++|.++||+||++||
T Consensus 91 ~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~pn~~~p~n~~aa~~~~~d~~~f~~~a~~~t~~~A 158 (158)
T 1zdn_A 91 GANGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTEIHG 158 (158)
T ss_dssp CTTSBBCHHHHTTTCCTTCCHHHHHHHHHHHHHSCCGGGCSSHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred CCCCEEehhhcCCCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999998
No 7
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=3.1e-53 Score=309.40 Aligned_cols=147 Identities=52% Similarity=0.917 Sum_probs=144.2
Q ss_pred CchHHHHHHHHHHHhhCCCCCeEEEeCCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecccccccee
Q 031739 4 GNLPRRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNID 83 (153)
Q Consensus 4 ~~~~kRl~~E~~~l~~~~~~g~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~ 83 (153)
..+.+||++|+++|++++++|+++.+.++|++.|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|||||+
T Consensus 20 ~~~~~RL~kEl~~l~~~~~~gi~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~ 99 (166)
T 2ayv_A 20 QGALKRINKELNDLSKDPPTNCSAGPVGDDMFHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKIYHPNIN 99 (166)
T ss_dssp TTHHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBC
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCCcCCcCC
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceeeccCCCCcCCcCCHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHHHHh
Q 031739 84 KLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKEWTRLYA 150 (153)
Q Consensus 84 ~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a 150 (153)
.+|.||+++|.++|+|+++|++||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||
T Consensus 100 ~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~pn~~~Pln~~aa~l~~~d~~~f~~~ar~~~~~~A 166 (166)
T 2ayv_A 100 SQGAICLDILKDQWSPALTISKVLLSISSLLTDPNPDDPLVPEIAHLYKSDRMRYDQTAREWSQKYA 166 (166)
T ss_dssp TTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred CCCeEEcccccccCCCCCcHHHHHHHHHHHHhCCCCCchhhHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999999999999999999998
No 8
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=2.1e-53 Score=306.47 Aligned_cols=150 Identities=37% Similarity=0.767 Sum_probs=145.7
Q ss_pred CCchHHHHHHHHHHHhhCCCCCeEEEeCCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccccccce
Q 031739 3 SGNLPRRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNI 82 (153)
Q Consensus 3 ~~~~~kRl~~E~~~l~~~~~~g~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv 82 (153)
+..+.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|||||
T Consensus 2 s~~a~~RL~~E~~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 81 (152)
T 2aak_A 2 STPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNI 81 (152)
T ss_dssp CCHHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTB
T ss_pred ChHHHHHHHHHHHHHHhCCCCCEEEEeCCCCccEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEecCcccCCC
Confidence 45688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCceeeccCCCCcCCcCCHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHHHHhcC
Q 031739 83 DKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKEWTRLYASD 152 (153)
Q Consensus 83 ~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 152 (153)
+.+|.||+++|.++|+|++++++||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||+.
T Consensus 82 ~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~~ 151 (152)
T 2aak_A 82 YADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSESKREYNRRVRDVVEQSWTA 151 (152)
T ss_dssp CTTSBBCCGGGTTSCCTTCCHHHHHHHHHHHHTSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCC-
T ss_pred CCCCEEechhhcCCCCCCCcHHHHHHHHHHHHhCCCCCccccHHHHHHHHHCHHHHHHHHHHHHHHHccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999963
No 9
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=3.5e-53 Score=308.89 Aligned_cols=147 Identities=50% Similarity=0.886 Sum_probs=144.4
Q ss_pred chHHHHHHHHHHHhhCCCCCeEEEeCCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccccccceeC
Q 031739 5 NLPRRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDK 84 (153)
Q Consensus 5 ~~~kRl~~E~~~l~~~~~~g~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~ 84 (153)
.+.+||++|+++|++++++|+++.+.++|++.|+++|.||++|||+||+|+++|.||++||++||+|+|.|+||||||+.
T Consensus 19 ~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i~HPnV~~ 98 (165)
T 2c4o_A 19 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS 98 (165)
T ss_dssp HHHHHHHHHHHHHHSSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecCCcCCcCCC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeeccCCCCcCCcCCHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHHHHhc
Q 031739 85 LGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKEWTRLYAS 151 (153)
Q Consensus 85 ~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 151 (153)
+|.||+++|.++|+|+++|++||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||+
T Consensus 99 ~G~ICl~iL~~~W~P~~ti~~vL~si~~ll~~pn~~~P~n~~aa~~~~~d~~~y~~~ar~~~~~~a~ 165 (165)
T 2c4o_A 99 NGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAM 165 (165)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHTTC
T ss_pred CCeEeehhhcCCCCCcCcHHHHHHHHHHHHhCCCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999999999999999999996
No 10
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00 E-value=1.7e-53 Score=307.88 Aligned_cols=150 Identities=67% Similarity=1.236 Sum_probs=146.0
Q ss_pred CCchHHHHHHHHHHHhhCCCCCeEEEeCCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccccccce
Q 031739 3 SGNLPRRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNI 82 (153)
Q Consensus 3 ~~~~~kRl~~E~~~l~~~~~~g~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv 82 (153)
+..+.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|||||
T Consensus 3 ~~~~~~RL~kE~~~l~~~~~~~i~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 82 (155)
T 1jat_A 3 AASLPKRIIKETEKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNI 82 (155)
T ss_dssp CCSCCHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCCBTTB
T ss_pred hHHHHHHHHHHHHHHHhCCCCCEEEEECCCchhEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeecccccCCC
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCceeeccCCCCcCCcCCHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHHHHhcC
Q 031739 83 DKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKEWTRLYASD 152 (153)
Q Consensus 83 ~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 152 (153)
+.+|.||+++|.++|+|++++++||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||+.
T Consensus 83 ~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~r~~~~~~a~~ 152 (155)
T 1jat_A 83 DRLGRICLDVLKTNWSPALQIRTVLLSIQALLASPNPNDPLANDVAEDWIKNEQGAKAKAREWTKLYAKK 152 (155)
T ss_dssp CTTCCBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSTTCCTTHHHHHHCHHHHHHHHHHHHHHHSEE
T ss_pred CCCCEEEchhhccCCCCCCCHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999974
No 11
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=6.3e-53 Score=305.17 Aligned_cols=149 Identities=39% Similarity=0.704 Sum_probs=144.9
Q ss_pred CCchHHHHHHHHHHHhhCCCCCeEEEeCCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccccccce
Q 031739 3 SGNLPRRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNI 82 (153)
Q Consensus 3 ~~~~~kRl~~E~~~l~~~~~~g~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv 82 (153)
+..+.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|||||
T Consensus 7 ~~~~~~RL~kEl~~l~~~~~~~i~~~p~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 86 (156)
T 2e2c_A 7 RHSVSKRLQQELRTLLMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNV 86 (156)
T ss_dssp CCCHHHHHHHHHHHHHHHCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEECCCCccEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCcccCCC
Confidence 35688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCceeeccCCCCcCCcCCHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHHHHhcC
Q 031739 83 DKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKEWTRLYASD 152 (153)
Q Consensus 83 ~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 152 (153)
+.+|.||+++|.++|+|++++++||.+|+++|.+|++++|+|.+||++| +|+++|.++||+|+++||..
T Consensus 87 ~~~G~iCl~iL~~~W~p~~~i~~vL~si~~ll~~pn~~~p~n~~aa~~~-~d~~~y~~~~~~~~~~~~~~ 155 (156)
T 2e2c_A 87 DQSGNICLDILKENWTASYDVRTILLSLQSLLGEPNNASPLNAQAADMW-SNQTEYKKVLHEKYKTAQSD 155 (156)
T ss_dssp CTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHTTSCCCSSCSCHHHHHHT-TCHHHHHHHHHHHHHHHHHC
T ss_pred ccCceEECccccccCCCCCcHHHHHHHHHHHHhCCCCCCHHHHHHHHHh-cCHHHHHHHHHHHHHHhccC
Confidence 9999999999999999999999999999999999999999999999999 89999999999999999964
No 12
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=8.1e-53 Score=308.14 Aligned_cols=150 Identities=48% Similarity=0.869 Sum_probs=146.2
Q ss_pred CCchHHHHHHHHHHHhhCCCCCeEEEeCCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccccccce
Q 031739 3 SGNLPRRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNI 82 (153)
Q Consensus 3 ~~~~~kRl~~E~~~l~~~~~~g~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv 82 (153)
|..+.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|||||
T Consensus 2 s~~~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv 81 (169)
T 1yh2_A 2 SMQRASRLKRELHMLATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNI 81 (169)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCccccC
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCceeeccCC----CCcCCcCCHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHHHHhcC
Q 031739 83 DKLGRICLDILK----DKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKEWTRLYASD 152 (153)
Q Consensus 83 ~~~G~icl~~l~----~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 152 (153)
+.+|.||+++|. ++|+|+++|++||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||+.
T Consensus 82 ~~~G~iCl~iL~~~~~~~W~p~~~i~~vL~si~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~~~~a~~ 155 (169)
T 1yh2_A 82 DSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPDDPLMADISSEFKYNKPAFLKNARQWTEKHARQ 155 (169)
T ss_dssp CTTCBBCCGGGSCTTTSCCCTTSCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSCC
T ss_pred CcCCeEecccccCCcccCCCCCCcHHHHHHHHHHHHhCCCCcchHhHHHHHHHHhhHHHHHHHHHHHHHHHccc
Confidence 999999999998 8999999999999999999999999999999999999999999999999999999975
No 13
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00 E-value=1.9e-53 Score=305.77 Aligned_cols=146 Identities=43% Similarity=0.838 Sum_probs=142.8
Q ss_pred hHHHHHHHHHHHhhCCCCCeEEEeCCC-CCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccccccceeC
Q 031739 6 LPRRIVKETQRLLSEPAPGISASPAED-NMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDK 84 (153)
Q Consensus 6 ~~kRl~~E~~~l~~~~~~g~~~~~~~~-~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~ 84 (153)
+.+||++|+++|++++++|+++.+.++ |+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|||||+.
T Consensus 2 ~~~RL~~El~~l~~~~~~~i~~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~~ 81 (149)
T 1fxt_A 2 RAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISS 81 (149)
T ss_dssp CHHHHHHHHHHHHHCGGGCCEEEESSSSCSSEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCCBTTBCS
T ss_pred hHHHHHHHHHHHHhCCCCCEEEEECCCCCceEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCccCCCcC
Confidence 579999999999999999999999887 9999999999999999999999999999999999999999999999999998
Q ss_pred -CCceeeccCCCCcCCcCCHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHHHHhc
Q 031739 85 -LGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKEWTRLYAS 151 (153)
Q Consensus 85 -~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 151 (153)
+|.||+++|.++|+|++++++||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||+
T Consensus 82 ~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~d~~~f~~~a~~~~~~~a~ 149 (149)
T 1fxt_A 82 VTGAICLDILKNAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYAS 149 (149)
T ss_dssp SSCCBCCHHHHTSCCTTCCHHHHHHHHHHHHHSCCSSSCSSHHHHHHHHHCSSHHHHHHHHHHHHHCC
T ss_pred CCCeEeCCcCCCCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999996
No 14
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00 E-value=8.4e-53 Score=305.39 Aligned_cols=151 Identities=43% Similarity=0.790 Sum_probs=145.0
Q ss_pred CCCchHHHHHHHHHHHhhC---CCCCeEEEeCCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecccc
Q 031739 2 ASGNLPRRIVKETQRLLSE---PAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIY 78 (153)
Q Consensus 2 ~~~~~~kRl~~E~~~l~~~---~~~g~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~ 78 (153)
|+..+.+||++|+++|+++ ++.|+++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|
T Consensus 5 Ms~~a~~RL~kEl~~l~~~~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 84 (159)
T 2bep_A 5 MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIW 84 (159)
T ss_dssp CCHHHHHHHHHHHHHHHHCHHHHTTSEEEEECSSSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCC
T ss_pred chHHHHHHHHHHHHHHHhcCCCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeCCCC
Confidence 4556889999999999985 5789999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeC-CCceeeccCCCCcCCcCCHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHHHHhcC
Q 031739 79 HPNIDK-LGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKEWTRLYASD 152 (153)
Q Consensus 79 Hpnv~~-~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 152 (153)
||||+. +|.||+++|.++|+|++++++||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||+.
T Consensus 85 HPni~~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~ 159 (159)
T 2bep_A 85 HPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGA 159 (159)
T ss_dssp BTTBCTTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSCC
T ss_pred ccCCCCCCCEEeChhhhccCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhhcC
Confidence 999995 99999999999999999999999999999999999999999999999999999999999999999974
No 15
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=2.4e-52 Score=304.39 Aligned_cols=148 Identities=34% Similarity=0.683 Sum_probs=143.4
Q ss_pred CchHHHHHHHHHHHhhCCCCCeEEEeCCC-CCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccccccce
Q 031739 4 GNLPRRIVKETQRLLSEPAPGISASPAED-NMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNI 82 (153)
Q Consensus 4 ~~~~kRl~~E~~~l~~~~~~g~~~~~~~~-~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv 82 (153)
+.+.|||++|+++|++++++|+++.+.++ |+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|||||
T Consensus 2 ~~a~~RL~kEl~~l~~~~~~gi~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNV 81 (164)
T 3h8k_A 2 GTALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNI 81 (164)
T ss_dssp CHHHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTB
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCCccCCC
Confidence 56889999999999999999999998766 99999999999999999999999999999999999999999999999999
Q ss_pred eCCCceeeccCC-------------CCcCCcCCHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHHHH
Q 031739 83 DKLGRICLDILK-------------DKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKEWTRLY 149 (153)
Q Consensus 83 ~~~G~icl~~l~-------------~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~ 149 (153)
+.+|.||+++|. ++|+|+++|++||.+|+++|.+||+++|+|.+||++|++|+++|.++||+|++++
T Consensus 82 ~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~ti~~vL~~i~~ll~~pn~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~s 161 (164)
T 3h8k_A 82 YPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQKS 161 (164)
T ss_dssp CTTSBBCCGGGSCSCSCCCSCCTTCCCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CCCCcEeeecccCcccccccccccccCCCCCCcHHHHHHHHHHHHcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHh
Confidence 999999999996 7899999999999999999999999999999999999999999999999999999
Q ss_pred hc
Q 031739 150 AS 151 (153)
Q Consensus 150 a~ 151 (153)
+.
T Consensus 162 ~~ 163 (164)
T 3h8k_A 162 LG 163 (164)
T ss_dssp HT
T ss_pred hc
Confidence 74
No 16
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=1.3e-52 Score=306.14 Aligned_cols=150 Identities=34% Similarity=0.684 Sum_probs=143.7
Q ss_pred CCCCchHHHHHHHHHHHhhCCCCCeEEEeCC-CCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccccc
Q 031739 1 MASGNLPRRIVKETQRLLSEPAPGISASPAE-DNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYH 79 (153)
Q Consensus 1 m~~~~~~kRl~~E~~~l~~~~~~g~~~~~~~-~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~H 79 (153)
|++ .+.+||++|+++|++++++|+++.+.+ +|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++||
T Consensus 1 M~~-~a~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 79 (165)
T 2ucz_A 1 MSK-TAQKRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILH 79 (165)
T ss_dssp -CH-HHHHHHHHHHHHHHHSCCTTEEEEESSSSCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCSC
T ss_pred CCh-HHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeCCCcc
Confidence 554 788999999999999999999999975 799999999999999999999999999999999999999999999999
Q ss_pred cceeCCCceeeccC-------------CCCcCCcCCHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHH
Q 031739 80 PNIDKLGRICLDIL-------------KDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKEWT 146 (153)
Q Consensus 80 pnv~~~G~icl~~l-------------~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~~~~~ 146 (153)
|||+.+|.||+++| .++|+|+++|++||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+
T Consensus 80 PNv~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~~~~~y~~~v~~~~ 159 (165)
T 2ucz_A 80 PNIYPNGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLSEPNIESGANIDACILWRDNRPEFERQVKLSI 159 (165)
T ss_dssp TTBCTTSBBCCGGGSCCCSCTTSTTTTTTSCCTTCCHHHHHHHHHHHHHSCCGGGCCCHHHHHHHHTTHHHHHHHHHHHH
T ss_pred CCCCCCCcEeehhhCCccccccccCCCCCCCCCcCcHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHHHHHHH
Confidence 99999999999999 68999999999999999999999999999999999999999999999999999
Q ss_pred HHHhc
Q 031739 147 RLYAS 151 (153)
Q Consensus 147 ~~~a~ 151 (153)
++++.
T Consensus 160 ~~~~~ 164 (165)
T 2ucz_A 160 LKSLG 164 (165)
T ss_dssp HHHTT
T ss_pred HHHhh
Confidence 99974
No 17
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00 E-value=1.2e-52 Score=305.42 Aligned_cols=149 Identities=32% Similarity=0.619 Sum_probs=143.4
Q ss_pred CCchHHHHHHHHHHHhhCCCCCeEEEeCCC-----CCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccc
Q 031739 3 SGNLPRRIVKETQRLLSEPAPGISASPAED-----NMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKI 77 (153)
Q Consensus 3 ~~~~~kRl~~E~~~l~~~~~~g~~~~~~~~-----~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i 77 (153)
|..+.+||++|+++|++++++|+++.|.++ |+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++
T Consensus 8 ~~~~~~RL~kEl~~l~~~~p~gi~~~p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t~i 87 (163)
T 3rcz_B 8 SSLCKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPL 87 (163)
T ss_dssp -CHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCC
T ss_pred cHHHHHHHHHHHHHHHhCCCCCEEEEEccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeCCC
Confidence 567899999999999999999999999765 899999999999999999999999999999999999999999999
Q ss_pred cccceeCCCceeeccCCC--CcCCcCCHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHHHHhc
Q 031739 78 YHPNIDKLGRICLDILKD--KWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKEWTRLYAS 151 (153)
Q Consensus 78 ~Hpnv~~~G~icl~~l~~--~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 151 (153)
|||||+.+|.||+++|.. +|+|+++|++||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||.
T Consensus 88 ~HPnV~~~G~iCl~iL~~~~~W~p~~ti~~vL~~i~~ll~~P~~~~p~n~~aa~~~~~d~~~y~~~~r~~~~~ya~ 163 (163)
T 3rcz_B 88 FHPNVYPSGTVCLSILNEEEGWKPAITIKQILLGIQDLLDDPNIASPAQTEAYTMFKKDKVEYEKRVRAQARENAP 163 (163)
T ss_dssp CSTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHTSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHTCC
T ss_pred ccCCCCCCCcEeccccCCCCCcCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhCc
Confidence 999999999999999975 49999999999999999999999999999999999999999999999999999984
No 18
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00 E-value=2.3e-52 Score=302.48 Aligned_cols=149 Identities=28% Similarity=0.592 Sum_probs=143.0
Q ss_pred CCchHHHHHHHHHHHhhCCCCCeEEEeCC-----CCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccc
Q 031739 3 SGNLPRRIVKETQRLLSEPAPGISASPAE-----DNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKI 77 (153)
Q Consensus 3 ~~~~~kRl~~E~~~l~~~~~~g~~~~~~~-----~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i 77 (153)
++.+.+||++|+++|++++++|+++.|.+ +|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++
T Consensus 2 s~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i 81 (157)
T 2gjd_A 2 SSLCLQRLQEERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPAGF 81 (157)
T ss_dssp -CHHHHHHHHHHHHHHHCCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECCTTC
T ss_pred ChHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCcccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeeccCCC
Confidence 35688999999999999999999998864 4899999999999999999999999999999999999999999999
Q ss_pred cccceeCCCceeeccCCC--CcCCcCCHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHHHHhc
Q 031739 78 YHPNIDKLGRICLDILKD--KWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKEWTRLYAS 151 (153)
Q Consensus 78 ~Hpnv~~~G~icl~~l~~--~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 151 (153)
|||||+.+|.||+++|.+ +|+|+++|++||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||+
T Consensus 82 ~HPnv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~ 157 (157)
T 2gjd_A 82 YHPNVYPSGTICLSILNEDQDWRPAITLKQIVLGVQDLLDSPNPNSPAQEPAWRSFSRNKAEYDKKVLLQAKQYSK 157 (157)
T ss_dssp CCTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHTSCCTTCCCCHHHHHHHHHCHHHHHHHHHHHHHHTBC
T ss_pred ccCCCCCCCcEeeecccCCCCCCCCCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 999999999999999987 79999999999999999999999999999999999999999999999999999996
No 19
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=3.6e-52 Score=309.96 Aligned_cols=148 Identities=45% Similarity=0.784 Sum_probs=140.9
Q ss_pred CchHHHHHHHHHHHhhCCC-------------CCeEEEeCCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCe
Q 031739 4 GNLPRRIVKETQRLLSEPA-------------PGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPK 70 (153)
Q Consensus 4 ~~~~kRl~~E~~~l~~~~~-------------~g~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~ 70 (153)
..+.+||++|+++|+++++ .|+++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+
T Consensus 31 ~~a~~RL~kEl~~l~k~~~~~~~~p~~~~~~~~gi~v~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~ 110 (193)
T 2f4z_A 31 PREQARLLKELADIQQLQRAHDSEPAATHSTSHGVSAQIVGGDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPYNPPK 110 (193)
T ss_dssp -CHHHHHHHHHHHHHHC----------------CEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCE
T ss_pred CHHHHHHHHHHHHHHhCCCccccccccccCCCCcEEEEEcCCCcceEEEEEeCCCCCCcCCCEEEEEEECCCcCCCCCCe
Confidence 3578999999999999887 799999999999999999999999999999999999999999999999
Q ss_pred EEEecccccccee-CCCceeeccCCCCcCCcCCHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHHHH
Q 031739 71 VRFLTKIYHPNID-KLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKEWTRLY 149 (153)
Q Consensus 71 v~f~t~i~Hpnv~-~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~ 149 (153)
|+|.|+||||||+ .+|.||+++|.++|+|+++|++||.+|++||.+|++++|+|.+||++|++|+++|.++||+|+++|
T Consensus 111 V~F~T~i~HPNI~~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~pnp~~P~n~~aa~l~~~d~~~f~~~ar~~t~~y 190 (193)
T 2f4z_A 111 MKFVTKIWHPNISSQTGAICLDILKHEWSPALTIRTALLSIQAMLADPVPTDPQDAEVAKMMIENHPLFVQTAKLWTETF 190 (193)
T ss_dssp EEESSCCCBTTBCTTTCBBCCGGGTTTCCTTSCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred EEEecCCccCCCcCCCCEEECccccccCCCCCCHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHH
Confidence 9999999999999 599999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hc
Q 031739 150 AS 151 (153)
Q Consensus 150 a~ 151 (153)
|+
T Consensus 191 a~ 192 (193)
T 2f4z_A 191 AK 192 (193)
T ss_dssp CC
T ss_pred cc
Confidence 96
No 20
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00 E-value=6.4e-52 Score=310.96 Aligned_cols=150 Identities=43% Similarity=0.797 Sum_probs=144.2
Q ss_pred CCchHHHHHHHHHHHhhC---CCCCeEEEeCCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccccc
Q 031739 3 SGNLPRRIVKETQRLLSE---PAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYH 79 (153)
Q Consensus 3 ~~~~~kRl~~E~~~l~~~---~~~g~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~H 79 (153)
+..+.+||++|+++|+++ ++.|+++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+|||
T Consensus 3 s~~a~~Rl~kEl~~l~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~H 82 (201)
T 3k9o_A 3 ANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWH 82 (201)
T ss_dssp -CTTHHHHHHHHHHHHTCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCB
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCCCEEEEECCCCccEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccccCccc
Confidence 456889999999999987 36899999999999999999999999999999999999999999999999999999999
Q ss_pred cceeC-CCceeeccCCCCcCCcCCHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHHHHhcC
Q 031739 80 PNIDK-LGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKEWTRLYASD 152 (153)
Q Consensus 80 pnv~~-~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 152 (153)
|||+. +|.||+++|.++|+|+++|++||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||+.
T Consensus 83 Pnv~~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~p~p~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~ 156 (201)
T 3k9o_A 83 PNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGA 156 (201)
T ss_dssp TTBCTTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHHCC
T ss_pred CCCcCCCCeeeCcccccCCCCCCCHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccc
Confidence 99995 99999999999999999999999999999999999999999999999999999999999999999975
No 21
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00 E-value=8.6e-52 Score=308.25 Aligned_cols=147 Identities=48% Similarity=0.816 Sum_probs=144.3
Q ss_pred chHHHHHHHHHHHhhCCCCCeEEEeCCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccccccceeC
Q 031739 5 NLPRRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDK 84 (153)
Q Consensus 5 ~~~kRl~~E~~~l~~~~~~g~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~ 84 (153)
.+.+||++|+++|++++++||++.+.++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|+||||||+.
T Consensus 48 ~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~ 127 (194)
T 3bzh_A 48 TSAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINS 127 (194)
T ss_dssp HHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCceeecccCccccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCCCccceECC
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeeccCCCCcCCcCCHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHHHHhc
Q 031739 85 LGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKEWTRLYAS 151 (153)
Q Consensus 85 ~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 151 (153)
+|.||+++|.++|+|+++|++||.+|++||.+||+++|+|.+||++|++|+++|.++||+|+++||+
T Consensus 128 ~G~ICL~iL~~~WsP~~ti~~vL~sI~~ll~~pnp~~Pln~~aa~l~~~d~~~f~~~ar~~t~~ya~ 194 (194)
T 3bzh_A 128 QGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYAT 194 (194)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CCceechhhhccCCCcCcHHHHHHHHHHHHhCCCCccchhHHHHHHHHHCHHHHHHHHHHHHHHhhC
Confidence 9999999999999999999999999999999999999999999999999999999999999999995
No 22
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00 E-value=3.5e-52 Score=314.66 Aligned_cols=150 Identities=46% Similarity=0.807 Sum_probs=145.6
Q ss_pred CCchHHHHHHHHHHHhhCCCCCeEEEeCCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccccccce
Q 031739 3 SGNLPRRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNI 82 (153)
Q Consensus 3 ~~~~~kRl~~E~~~l~~~~~~g~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv 82 (153)
+..+.+||++|+++|++++++|+++.+.++|++.|+++|.||++|||+||+|+++|.||++||++||+|+|.|+||||||
T Consensus 21 ~s~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI 100 (216)
T 2pwq_A 21 GSKELLRLQKELKDIENENVQEIDAHIKDSNFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTKIWHPNI 100 (216)
T ss_dssp SCHHHHHHHHHHHHHHHSCTTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred cCHHHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCCCcCCCC
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred e-CCCceeeccCCCCcCCcCCHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHHHHhcC
Q 031739 83 D-KLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKEWTRLYASD 152 (153)
Q Consensus 83 ~-~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 152 (153)
+ .+|.||+++|.+.|+|+++|++||.+|++||.+|++++|+|.+||++|++|+++|.++||+|+++||+.
T Consensus 101 ~~~~G~ICL~iL~~~WsP~~ti~~VL~sI~sLL~~Pnp~dPln~eaa~~~~~d~~~f~~~ar~~t~~ya~~ 171 (216)
T 2pwq_A 101 SSQTGAICLDVLKNEWSPALTIRTALLSIQALLSDPQPDDPQDAEVAKMYKENHALFVKTASVWTKTFATG 171 (216)
T ss_dssp CTTTCBBCCHHHHHHCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSCC
T ss_pred cCCCCEEEchhhcccCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcCC
Confidence 9 589999999999999999999999999999999999999999999999999999999999999999974
No 23
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00 E-value=3.8e-52 Score=302.48 Aligned_cols=151 Identities=31% Similarity=0.619 Sum_probs=143.8
Q ss_pred CCCchHHHHHHHHHHHhhCCCCCeEEEeCC-----CCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecc
Q 031739 2 ASGNLPRRIVKETQRLLSEPAPGISASPAE-----DNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTK 76 (153)
Q Consensus 2 ~~~~~~kRl~~E~~~l~~~~~~g~~~~~~~-----~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~ 76 (153)
|+..+.+||++|+++|++++++|+.+.+.+ +|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+
T Consensus 4 M~~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 83 (161)
T 2grr_A 4 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPP 83 (161)
T ss_dssp CCHHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSC
T ss_pred ccHHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCCccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEecC
Confidence 445678999999999999999999998853 689999999999999999999999999999999999999999999
Q ss_pred ccccceeCCCceeeccCCC--CcCCcCCHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHHHHhcC
Q 031739 77 IYHPNIDKLGRICLDILKD--KWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKEWTRLYASD 152 (153)
Q Consensus 77 i~Hpnv~~~G~icl~~l~~--~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 152 (153)
+|||||+.+|.||+++|.+ +|+|++++++||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||++
T Consensus 84 i~HPnv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~~ 161 (161)
T 2grr_A 84 LFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQSPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS 161 (161)
T ss_dssp CCSTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHTCC-
T ss_pred cccCCCCCCCeEeehhcCCCCCcCCCCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999986 899999999999999999999999999999999999999999999999999999974
No 24
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=100.00 E-value=3e-51 Score=296.15 Aligned_cols=147 Identities=33% Similarity=0.648 Sum_probs=142.8
Q ss_pred chHHHHHHHHHHHhhCCCCCeEE-EeCCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecccccccee
Q 031739 5 NLPRRIVKETQRLLSEPAPGISA-SPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNID 83 (153)
Q Consensus 5 ~~~kRl~~E~~~l~~~~~~g~~~-~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~ 83 (153)
.+.+||++|+++|++++++|+.+ .+.++|+++|+++|. |++|||+||+|+++|.||++||++||+|+|.|++|||||+
T Consensus 4 ~~~~RL~kEl~~l~~~~~~~i~~~~~~~~~l~~w~~~I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~ 82 (155)
T 1wzv_A 4 MASMRVVKELEDLQKKPPPYLRNLSSDDANVLVWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPNVD 82 (155)
T ss_dssp -CHHHHHHHHHHHHHSCCTTEEEEEECSSCTTEEEEEEC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCCBTTBC
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEecCCCchheEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCccCcCC
Confidence 47899999999999999999999 788999999999999 9999999999999999999999999999999999999999
Q ss_pred CCCceeeccC-CCCcCCcCCHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHHHHhcC
Q 031739 84 KLGRICLDIL-KDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKEWTRLYASD 152 (153)
Q Consensus 84 ~~G~icl~~l-~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 152 (153)
.+|.||+++| .++|+|+++|++||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||+.
T Consensus 83 ~~G~iCl~iL~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~~~~a~~ 152 (155)
T 1wzv_A 83 ENGQICLPIISSENWKPCTKTCQVLEALNVLVNRPNIREPLRMDLADLLTQNPELFRKNAEEFTLRFGVD 152 (155)
T ss_dssp TTCBCCCGGGCTTTCCTTCCHHHHHHHHHHHHHSCCSSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCEE
T ss_pred CCCeEeecCCCccCCCCCCcHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 9999999999 89999999999999999999999999999999999999999999999999999999974
No 25
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.6e-51 Score=303.30 Aligned_cols=149 Identities=40% Similarity=0.643 Sum_probs=143.3
Q ss_pred CCchHHHHHHHHHHHhhCCCCCeEEEeCCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccccccce
Q 031739 3 SGNLPRRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNI 82 (153)
Q Consensus 3 ~~~~~kRl~~E~~~l~~~~~~g~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv 82 (153)
+..+.+||++|+++|++++++||++.+.++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|++|||||
T Consensus 28 ~~~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV 107 (179)
T 1i7k_A 28 RGPVGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNV 107 (179)
T ss_dssp --CHHHHHHHHHHHHHHHCCTTEEEEEETTEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSCCCSTTB
T ss_pred ChHHHHHHHHHHHHHHhCCCCCEEEEEcCCcccccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecCCccCcc
Confidence 56788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCceeeccCCCCcCCcCCHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHHHHhcC
Q 031739 83 DKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKEWTRLYASD 152 (153)
Q Consensus 83 ~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 152 (153)
+.+|.||+++|.+.|+|+++|++||.+|++||.+|++++|+|.+||++| +|+++|.++|++++++++..
T Consensus 108 ~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~Pn~~~Pln~~aa~l~-~d~~~f~~~v~~~v~~~~~~ 176 (179)
T 1i7k_A 108 DTQGNISLDILKEKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELW-KNPTAFKKYLQETYSKQVTS 176 (179)
T ss_dssp CTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHT-TSHHHHHHHHHHHHHTTCC-
T ss_pred ccCCeEEcccCcCcCCCCCCHHHHHHHHHHHHhCCCCcchhhHHHHHHh-hCHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999999999999999999999 99999999999999999863
No 26
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=100.00 E-value=5.9e-51 Score=301.64 Aligned_cols=151 Identities=34% Similarity=0.643 Sum_probs=143.6
Q ss_pred CCCCchHHHHHHHHHHHhhCCCCCeEEE-eCCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccccc
Q 031739 1 MASGNLPRRIVKETQRLLSEPAPGISAS-PAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYH 79 (153)
Q Consensus 1 m~~~~~~kRl~~E~~~l~~~~~~g~~~~-~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~H 79 (153)
|++..+.|||++|+++|++++++|+++. +.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++||
T Consensus 3 m~~~~a~kRL~kEl~~l~~~~~~gi~~~~~~~~nl~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 82 (183)
T 3rz3_A 3 MGSPSSQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWH 82 (183)
T ss_dssp --CCHHHHHHHHHHHHHHHSCCTTEEEEECTTCCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCC
T ss_pred CcchHHHHHHHHHHHHHHhCCCCCEEEEecCccchhheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCCCcc
Confidence 7888999999999999999999999998 678899999999999999999999999999999999999999999999999
Q ss_pred cceeCCCceeeccCC-------------CCcCCcCCHHHHHHHHHHHHcCCCCCCcccHHHHHHHHh------CHHHHHH
Q 031739 80 PNIDKLGRICLDILK-------------DKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKA------DETEAVE 140 (153)
Q Consensus 80 pnv~~~G~icl~~l~-------------~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~aa~~~~~------~~~~f~~ 140 (153)
|||+.+|.||+++|. +.|+|+++|++||.+|++||.+||+++|+|.|||.+|++ |+++|.+
T Consensus 83 PnV~~~G~iClsiL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~~~~~~~~~~~y~~ 162 (183)
T 3rz3_A 83 PNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYRKWKESKGKDREYTD 162 (183)
T ss_dssp TTBCTTSBBCCTTC--------------CCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHHHHHHHHHHHHTTTCCCHHHH
T ss_pred CCCCCCCcEehhhcCcccccccccccccCCCCCcCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHhcccccccHHHHHH
Confidence 999999999999996 789999999999999999999999999999999999999 7899999
Q ss_pred HHHHHHHHHhc
Q 031739 141 TAKEWTRLYAS 151 (153)
Q Consensus 141 ~~~~~~~~~a~ 151 (153)
+|++++++++.
T Consensus 163 ~v~~~v~~s~~ 173 (183)
T 3rz3_A 163 IIRKQVLGTKV 173 (183)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999998864
No 27
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=100.00 E-value=1.3e-50 Score=312.16 Aligned_cols=150 Identities=43% Similarity=0.797 Sum_probs=144.5
Q ss_pred CCchHHHHHHHHHHHhhC---CCCCeEEEeCCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccccc
Q 031739 3 SGNLPRRIVKETQRLLSE---PAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYH 79 (153)
Q Consensus 3 ~~~~~kRl~~E~~~l~~~---~~~g~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~H 79 (153)
+..+.+||++|+++|+++ ++.|+++.+.++|++.|+++|.||++|||+||+|+++|.||++||++||+|+|.|+|||
T Consensus 55 s~~a~~RL~kEl~~l~~~~~~~~~gi~v~p~~dnl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~H 134 (253)
T 3e46_A 55 ANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWH 134 (253)
T ss_dssp CHHHHHHHHHHHHHHHHCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCB
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeecCCCcc
Confidence 346789999999999987 46899999999999999999999999999999999999999999999999999999999
Q ss_pred cceeC-CCceeeccCCCCcCCcCCHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHHHHhcC
Q 031739 80 PNIDK-LGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKEWTRLYASD 152 (153)
Q Consensus 80 pnv~~-~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 152 (153)
|||+. +|.||+++|.++|+|+++|++||.+|+++|.+||+++|+|.+||++|++|+++|.++|++|+++||+.
T Consensus 135 PNV~~~~G~ICL~iL~~~WsP~~ti~~vL~sI~~ll~~pnp~~Pln~eaa~l~~~d~~~f~~~ar~~t~~yA~~ 208 (253)
T 3e46_A 135 PNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGA 208 (253)
T ss_dssp TTBCTTTCBBCCGGGTTCCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHHCC
T ss_pred CCccCCCCeeecccccCCCCCCCCHHHHHHHHHHHhcCCCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHhccc
Confidence 99995 99999999999999999999999999999999999999999999999999999999999999999975
No 28
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=100.00 E-value=1.3e-50 Score=295.93 Aligned_cols=147 Identities=30% Similarity=0.585 Sum_probs=140.8
Q ss_pred CchHHHHHHHHHHHhhCCCCCeEEEe-CCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccccccce
Q 031739 4 GNLPRRIVKETQRLLSEPAPGISASP-AEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNI 82 (153)
Q Consensus 4 ~~~~kRl~~E~~~l~~~~~~g~~~~~-~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv 82 (153)
+.+.|||++|+++|++++++|+++.+ .++|++.|+++| ||++|||+||+|+++|.||++||++||+|+|.|++|||||
T Consensus 13 s~~~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv 91 (167)
T 3fn1_B 13 SVRDKLLVKEVAELEANLPCTCKVHFPDPNKLHCFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPNI 91 (167)
T ss_dssp CHHHHHHHHHHHHHGGGSCTTEEEECSSSSCTTEEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEEECSCCCCSSB
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEeCCCCcceeEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeEecCCcccCCC
Confidence 45789999999999999999999986 467899999999 8999999999999999999999999999999999999999
Q ss_pred eCCCceeeccCCC------CcCCcCCHHHHHHHHHHHHcC-CCCCCcccHHHHHHHHhCHHHHHHHHHHHHHHHhc
Q 031739 83 DKLGRICLDILKD------KWSPALQIRTVLLSIQALLSA-PNPDDPLSDNIAKHWKADETEAVETAKEWTRLYAS 151 (153)
Q Consensus 83 ~~~G~icl~~l~~------~W~p~~~i~~il~~i~~ll~~-p~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 151 (153)
+.+|.||+++|.. +|+|+++|++||.+|+++|.+ ||+++|+|.|||++|++|+++|.++||+|+++||+
T Consensus 92 ~~~G~iCl~iL~~~~~~~~~W~p~~~i~~vl~~i~~ll~~~pn~~~p~n~eaa~~~~~~~~~f~~~~r~~~~~~A~ 167 (167)
T 3fn1_B 92 TETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRNKVDDYIKRYAR 167 (167)
T ss_dssp CTTCCBCCGGGSBCSSSTTSBCTTCCHHHHHHHHHHTTTTTCCSSSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CCCCEEechhhccCCCCCCCCCCcCcHHHHHHHHHHHHcCCCCCCcchhHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 9999999999975 799999999999999999999 69999999999999999999999999999999996
No 29
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=100.00 E-value=2.3e-51 Score=310.02 Aligned_cols=148 Identities=42% Similarity=0.831 Sum_probs=143.1
Q ss_pred chHHHHHHHHHHHhhCCCCCeEEEeCCCC-CceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecccccccee
Q 031739 5 NLPRRIVKETQRLLSEPAPGISASPAEDN-MRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNID 83 (153)
Q Consensus 5 ~~~kRl~~E~~~l~~~~~~g~~~~~~~~~-~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~ 83 (153)
.+.+||++|+++|++++++||++.+.++| +++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+||||||+
T Consensus 2 ~a~~RL~kEl~~l~~~~~~gi~~~p~~~~~l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~ 81 (215)
T 1tte_A 2 SRAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNIS 81 (215)
T ss_dssp TTHHHHHHHHHHHHTTTCTTCEECCCSSSSCCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCCCSSSC
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCccCcCc
Confidence 46799999999999999999999997764 56999999999999999999999999999999999999999999999999
Q ss_pred C-CCceeeccCCCCcCCcCCHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHHHHhcC
Q 031739 84 K-LGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKEWTRLYASD 152 (153)
Q Consensus 84 ~-~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 152 (153)
. +|.||+++|.++|+|+++|++||.+|++||.+|++++|+|.+||++|++|+++|.++||+|+++||+.
T Consensus 82 ~~~G~ICL~iL~~~WsP~~ti~~VL~sI~sLL~~Pnp~~Pln~eaa~~~~~d~~~f~~~ar~~t~~yA~~ 151 (215)
T 1tte_A 82 SVTGAICLDILRNAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYASE 151 (215)
T ss_dssp SSSSCCCSSTTTCCSCTTCCHHHHHHHHHHHHTSCCCSSCSCHHHHHHHHHCHHHHHHHHHHHHHHSSCC
T ss_pred CCCCEEECccCCCCCCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhccC
Confidence 8 99999999999999999999999999999999999999999999999999999999999999999975
No 30
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.7e-50 Score=294.54 Aligned_cols=145 Identities=27% Similarity=0.492 Sum_probs=139.0
Q ss_pred CCchHHHHHHHHHHHhhCCCCCeEEEeCCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccccccce
Q 031739 3 SGNLPRRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNI 82 (153)
Q Consensus 3 ~~~~~kRl~~E~~~l~~~~~~g~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv 82 (153)
+..+.+||++|+++|++++++|+++.+.++|++.|+++|.||++|||+||+|+++|.||++||++||+|+|.|+||||||
T Consensus 21 ~~~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI 100 (169)
T 1yrv_A 21 HGRAYLLLHRDFCDLKENNYKGITAKPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIPFHPNV 100 (169)
T ss_dssp GCHHHHHHHHHHHHHHHHCCTTEEEEECSTTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESSCCCCTTB
T ss_pred ChHHHHHHHHHHHHHHhCCCCCEEEEEcCCccccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecCCCccCcc
Confidence 34678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -eCCCceeeccCC--CCcCCcCCHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHHH
Q 031739 83 -DKLGRICLDILK--DKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKEWTRL 148 (153)
Q Consensus 83 -~~~G~icl~~l~--~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~ 148 (153)
+.+|.||+++|. ++|+|+++|++||.+|+++|.+|++++|+|.+||++|++|+++|.++ ++++++
T Consensus 101 ~~~~G~ICL~iL~~~~~WsP~~ti~~vL~sI~sll~~Pn~~~Pln~eaa~l~~~d~~~y~~~-~~~v~~ 168 (169)
T 1yrv_A 101 DPHTGQPCIDFLDNPEKWNTNYTLSSILLALQVMLSNPVLENPVNLEAARILVKDESLYRTI-LRLFNR 168 (169)
T ss_dssp CTTTCCBCCHHHHCGGGCCTTCCHHHHHHHHHHHHTSCCTTSCSCHHHHHHHHSCHHHHHHH-HHHHC-
T ss_pred cCCCCeEeehhhcCCcCCCCcCCHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHH-HHHhhC
Confidence 689999999998 89999999999999999999999999999999999999999999999 888764
No 31
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=100.00 E-value=7.8e-51 Score=292.97 Aligned_cols=145 Identities=34% Similarity=0.702 Sum_probs=138.4
Q ss_pred chHHHHHHHHHHHhhCCCCCeEEEeCCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccccccceeC
Q 031739 5 NLPRRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDK 84 (153)
Q Consensus 5 ~~~kRl~~E~~~l~~~~~~g~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~ 84 (153)
++.|||++|+++|++. |+++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|||||+.
T Consensus 2 sa~~Rl~kEl~~l~~~---~~~v~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni~~ 78 (152)
T 2onu_A 2 TSLTRKQCDFTKLIMA---GYDLELNNGSTQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLHPNVDE 78 (152)
T ss_dssp -CCCHHHHTHHHHHHH---TCCEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCT
T ss_pred hHHHHHHHHHHhcCcC---CCEEEEccCccceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCccCcCcC
Confidence 4679999999999873 7889999999999999999999999999999999999999999999999999999999994
Q ss_pred -CCceeeccCCCCcCCcCCHHHHHHH-HHHHHcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHHHHhcC
Q 031739 85 -LGRICLDILKDKWSPALQIRTVLLS-IQALLSAPNPDDPLSDNIAKHWKADETEAVETAKEWTRLYASD 152 (153)
Q Consensus 85 -~G~icl~~l~~~W~p~~~i~~il~~-i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 152 (153)
+|.||+++|.++|+|++++++||.+ |++||.+|++++|+|.+||++|++|+++|.++||+|+++||+.
T Consensus 79 ~~G~iCl~il~~~W~p~~~i~~vl~~ii~~Ll~~Pn~~~P~n~~aa~~~~~d~~~y~~~v~~~~~~~a~~ 148 (152)
T 2onu_A 79 ASGSVCLDVINQTWTPLYSLVNVFEVFLPQLLTYPNPSDPLNSDAASLLMKDKNIYEEKVKEYVKLYASK 148 (152)
T ss_dssp TTCBBCHHHHHHHCCTTCCHHHHHHTHHHHHHHSCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHSCG
T ss_pred cCCeEecccccccCCCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccC
Confidence 9999999999999999999999999 6899999999999999999999999999999999999999974
No 32
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=100.00 E-value=1.5e-49 Score=291.49 Aligned_cols=150 Identities=30% Similarity=0.535 Sum_probs=140.1
Q ss_pred CCCchHHHHHHHHHHHhh-C-C------CC---CeEEEe-CCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCC
Q 031739 2 ASGNLPRRIVKETQRLLS-E-P------AP---GISASP-AEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAP 69 (153)
Q Consensus 2 ~~~~~~kRl~~E~~~l~~-~-~------~~---g~~~~~-~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP 69 (153)
|+..+.+||++|+++|++ + + +. ++.+.+ .++|+++|+++|.||++|||+||+|+++|.||++||++||
T Consensus 3 Ms~~~~~RL~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP 82 (172)
T 2y9m_A 3 MADTCMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNPP 82 (172)
T ss_dssp -CHHHHHHHHHHHHHHHHHHTCCCTTTCTTTTTEEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCC
T ss_pred CcHHHHHHHHHHHHHHHhccCCcccccCCCCcceEEEecCCCCchhEEEEEEECCCCCcccCCEEEEEEECCCcCCCCCC
Confidence 455788999999999998 5 3 33 466778 7889999999999999999999999999999999999999
Q ss_pred eEEEec-ccccccee-CCCceeeccCC-CCcCCcCCHHHHHHHHHHHHcCCCCCCcccHHHHHHHHh-CHHHHHHHHHHH
Q 031739 70 KVRFLT-KIYHPNID-KLGRICLDILK-DKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKA-DETEAVETAKEW 145 (153)
Q Consensus 70 ~v~f~t-~i~Hpnv~-~~G~icl~~l~-~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~aa~~~~~-~~~~f~~~~~~~ 145 (153)
+|+|.| +||||||+ .+|.||+++|. ++|+|++++++||.+|+++|.+|++++|+|.+||++|++ |+++|.++||+|
T Consensus 83 ~v~f~t~~i~HPni~~~~G~iCl~iL~~~~W~p~~~i~~vL~si~~ll~~p~~~~p~n~~aa~~~~~~d~~~f~~~~~~~ 162 (172)
T 2y9m_A 83 KISFMQNNILHCNVKSATGEICLNILKPEEWTPVWDLLHCVHAVWRLLREPVCDSPLDVDIGNIIRCGDMSAYQGIVKYF 162 (172)
T ss_dssp EEEECTTSCCCTTEETTTTEECCGGGSTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHTTTCHHHHHHHHHHH
T ss_pred EEEEeeCCeecCCCcCCCCEEeccccCCCCCCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHhCCHHHHHHHHHHH
Confidence 999999 99999997 79999999998 899999999999999999999999999999999999999 999999999999
Q ss_pred HHHHhc
Q 031739 146 TRLYAS 151 (153)
Q Consensus 146 ~~~~a~ 151 (153)
+++++.
T Consensus 163 ~~~~~~ 168 (172)
T 2y9m_A 163 LAERER 168 (172)
T ss_dssp HHHHHC
T ss_pred HHHHHh
Confidence 999875
No 33
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=100.00 E-value=6.2e-50 Score=293.51 Aligned_cols=143 Identities=34% Similarity=0.737 Sum_probs=110.7
Q ss_pred CCchHHHHHHHHHHHhhCCCCCeEEEeCC-CCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccccccc
Q 031739 3 SGNLPRRIVKETQRLLSEPAPGISASPAE-DNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPN 81 (153)
Q Consensus 3 ~~~~~kRl~~E~~~l~~~~~~g~~~~~~~-~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpn 81 (153)
+..+.|||++|+++|++++++||++.+.+ +|++.|+++|.||++|||+||+|+++|.||++||++||+|+|.|++||||
T Consensus 15 ~~~~~~rL~kEl~~l~~~~~~gi~~~p~~~~nl~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~i~HPN 94 (172)
T 2awf_A 15 VPRGSLLLRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPN 94 (172)
T ss_dssp CCTTHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTT
T ss_pred hHHHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccCCCccCC
Confidence 46789999999999999999999999865 79999999999999999999999999999999999999999999999999
Q ss_pred eeCCCceeeccCC-------------CCcCCcCCHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhCHH-HHHHHHHHH
Q 031739 82 IDKLGRICLDILK-------------DKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADET-EAVETAKEW 145 (153)
Q Consensus 82 v~~~G~icl~~l~-------------~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~aa~~~~~~~~-~f~~~~~~~ 145 (153)
|+.+|.||+++|. +.|+|+++|++||.+|++||.+|++++|+|.+||++|++|++ +|.++||+|
T Consensus 95 V~~~G~IClsiL~~~~~d~~~~~~~~~~WsP~~ti~~vL~sI~sll~~Pn~~~p~n~~aa~~~~~d~~~~f~~~vr~~ 172 (172)
T 2awf_A 95 VDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARC 172 (172)
T ss_dssp BCTTCBBCCGGGSCC---------CTTSCCTTCCHHHHHHHHHHHHSCC-----------------------------
T ss_pred CCCCCcEehhhcCCcccccccccccCCCCCCcCcHHHHHHHHHHHHHCcCCCCccCHHHHHHHHHCcHHHHHHHHHhC
Confidence 9999999999996 689999999999999999999999999999999999999999 999999986
No 34
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.3e-50 Score=296.10 Aligned_cols=143 Identities=33% Similarity=0.681 Sum_probs=137.6
Q ss_pred chHHHHHHHHHHHhhCCCCCeEEEeCCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccccccceeC
Q 031739 5 NLPRRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDK 84 (153)
Q Consensus 5 ~~~kRl~~E~~~l~~~~~~g~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~ 84 (153)
.+.|||++|+++|+. +|+++.+. +|++.|+++|.||++|||+||+|+++|.||++||++||+|+|.|+||||||+.
T Consensus 25 ~a~~RL~kEl~~l~~---~g~~v~~~-ddl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~i~HPNV~~ 100 (179)
T 2z5d_A 25 PGKRRMDTDVIKLIE---SKHEVTIL-GGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDE 100 (179)
T ss_dssp HHHHHHHHHHHHHHH---SSSCEEEE-EETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCT
T ss_pred HHHHHHHHHHHhcCc---CCCEEEEC-CCCceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecCCccCcCCC
Confidence 478999999999985 57888887 67899999999999999999999999999999999999999999999999998
Q ss_pred -CCceeeccCCCCcCCcCCHHHHHHH-HHHHHcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHHHHhc
Q 031739 85 -LGRICLDILKDKWSPALQIRTVLLS-IQALLSAPNPDDPLSDNIAKHWKADETEAVETAKEWTRLYAS 151 (153)
Q Consensus 85 -~G~icl~~l~~~W~p~~~i~~il~~-i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 151 (153)
+|.||+++|.++|+|+++|++||.+ |++||.+||+++|+|.+||++|++|+++|.++||+|+++||+
T Consensus 101 ~~G~ICL~iL~~~WsP~~ti~~iL~s~I~~Ll~~Pn~~~p~n~eaa~~~~~d~~~y~~~vr~~~~~~a~ 169 (179)
T 2z5d_A 101 ASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYAT 169 (179)
T ss_dssp TTCBBCHHHHHHHCCTTCCTTHHHHTHHHHHHHSCCCSSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSS
T ss_pred CCCeEeccccccCCCCCCCHHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHcc
Confidence 9999999999999999999999999 999999999999999999999999999999999999999997
No 35
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=100.00 E-value=5.8e-50 Score=289.10 Aligned_cols=146 Identities=33% Similarity=0.722 Sum_probs=137.5
Q ss_pred hHHHHHHHHHHHhhCCCCCeEEEe-CCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccccccceeC
Q 031739 6 LPRRIVKETQRLLSEPAPGISASP-AEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDK 84 (153)
Q Consensus 6 ~~kRl~~E~~~l~~~~~~g~~~~~-~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~ 84 (153)
+.+||++|+++|++++++|+.+.+ .++|+++|+++|. |++|||+||+|+++|.||++||++||+|+|.|++|||||+.
T Consensus 3 a~~RL~kEl~~l~~~~~~~~~~~~~~~~~l~~w~~~i~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 81 (154)
T 1c4z_D 3 ASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDE 81 (154)
T ss_dssp -CTTHHHHHTTCSSSCCSSCEEECSSCSSSSEEEEEEC-CCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEeeCCCCchheEEEEEe-CCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCccccCCC
Confidence 568999999999999999998654 6789999999998 99999999999999999999999999999999999999999
Q ss_pred CCceeeccCC-CCcCCcCCHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHHHHhcC
Q 031739 85 LGRICLDILK-DKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKEWTRLYASD 152 (153)
Q Consensus 85 ~G~icl~~l~-~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 152 (153)
+|.||+++|. ++|+|++++++||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||+.
T Consensus 82 ~G~iCl~iL~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 150 (154)
T 1c4z_D 82 KGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKYGEK 150 (154)
T ss_dssp TCBBCCTTTSSSSCCTTCCHHHHHHHHHHHHHSCCCSSCSCHHHHHHHHTCSSTTHHHHHHHHTTC---
T ss_pred CCEEECCCCCCCCCCCCCcHHHHHHHHHHHHcCCCCCchhhHHHHHHHHHhHHHHHHHHHHHHHHhccc
Confidence 9999999996 8999999999999999999999999999999999999999999999999999999974
No 36
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.3e-48 Score=283.49 Aligned_cols=142 Identities=30% Similarity=0.578 Sum_probs=136.4
Q ss_pred CchHHHHHHHHHHHhhCCCCCeEEE-eCCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccccccce
Q 031739 4 GNLPRRIVKETQRLLSEPAPGISAS-PAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNI 82 (153)
Q Consensus 4 ~~~~kRl~~E~~~l~~~~~~g~~~~-~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv 82 (153)
..+.+||++|+++| ++++|+++. +.++|+++|+++| ||++|||+||+|+++|.||++||++||+|+|.|++|||||
T Consensus 5 ~~~~~RL~kEl~~l--~~~~~~~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 81 (160)
T 1y8x_A 5 SAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNI 81 (160)
T ss_dssp CHHHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTB
T ss_pred cHHHHHHHHHHHhc--CCCCCeEEEeccCCccceEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCCccCcC
Confidence 35789999999999 577899998 7889999999998 9999999999999999999999999999999999999999
Q ss_pred eCCCceeeccCCCCcCCcCCHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHHH
Q 031739 83 DKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKEWTRL 148 (153)
Q Consensus 83 ~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~ 148 (153)
+.+|.||+++|.++|+|++++++||.+|+++|.+|++++|+|.+||++|++|+++|.++|++|++.
T Consensus 82 ~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~Pn~~~p~n~~aa~~~~~~~~~f~~~v~~~v~~ 147 (160)
T 1y8x_A 82 DLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRG 147 (160)
T ss_dssp CTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCCSSCSCHHHHHHHHSCHHHHHHHHHHHHHS
T ss_pred CCCCeEEcccchhhccCCCCHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999999999999999999999874
No 37
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=100.00 E-value=5.4e-49 Score=288.14 Aligned_cols=143 Identities=32% Similarity=0.599 Sum_probs=135.4
Q ss_pred chHHHHHHHHHHHhhCCCCCeEEEeCCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecccccccee-
Q 031739 5 NLPRRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNID- 83 (153)
Q Consensus 5 ~~~kRl~~E~~~l~~~~~~g~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~- 83 (153)
.+.+||++|+++|++++. ++ +.++|++.|+++|.||++|||+||+|+++|.||++||++||+|+|.|+||||||+
T Consensus 12 ~~~~RL~~El~~l~~~~~-~v---~~~~~l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNi~~ 87 (171)
T 1yf9_A 12 RSNRRREMDYMRLCNSTR-KV---YPSDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILHPNVDE 87 (171)
T ss_dssp -CCHHHHHHHHHHHSSSS-CE---EECSSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCT
T ss_pred cHHHHHHHHHHHHHhCCC-CC---CCCCCceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCcccccCcc
Confidence 568999999999999874 44 3578999999999999999999999999999999999999999999999999999
Q ss_pred CCCceeeccCCCCcCCcCCHHHHHHHH-HHHHcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHHHHhc
Q 031739 84 KLGRICLDILKDKWSPALQIRTVLLSI-QALLSAPNPDDPLSDNIAKHWKADETEAVETAKEWTRLYAS 151 (153)
Q Consensus 84 ~~G~icl~~l~~~W~p~~~i~~il~~i-~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 151 (153)
.+|.||+++|.++|+|++++++||.+| ++||.+|++++|+|.+||++|++|+++|.++||+|+++||+
T Consensus 88 ~~G~iCl~iL~~~W~p~~~i~~vL~sil~~ll~~Pn~~~p~n~~aa~~~~~d~~~y~~~vr~~~~~~a~ 156 (171)
T 1yf9_A 88 RSGSVCLDVINQTWTPMYQLENIFDVFLPQLLRYPNPSDPLNVQAAHLLHADRVGFDALLREHVSTHAT 156 (171)
T ss_dssp TTCBBCHHHHHHHCCTTCCTHHHHHTHHHHHHHSCCSSCCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred cCCeEeccccccCCCCCCcHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcC
Confidence 599999999999999999999999997 79999999999999999999999999999999999999996
No 38
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=100.00 E-value=2.3e-48 Score=317.54 Aligned_cols=149 Identities=50% Similarity=0.864 Sum_probs=146.0
Q ss_pred chHHHHHHHHHHHhhCCCCCeEEEeCCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccccccceeC
Q 031739 5 NLPRRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDK 84 (153)
Q Consensus 5 ~~~kRl~~E~~~l~~~~~~g~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~ 84 (153)
.+.|||++|+++|++++++|+++.|.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++|||||++
T Consensus 3 ~a~~RL~kEl~~l~~~~~~~~~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~ 82 (399)
T 4ddg_A 3 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS 82 (399)
T ss_dssp HHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCcceEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeeccccccccCC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeeccCCCCcCCcCCHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHHHHhcCC
Q 031739 85 LGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKEWTRLYASDG 153 (153)
Q Consensus 85 ~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~~ 153 (153)
+|.||+++|.++|+|++++++||.+|+++|.+||+++|+|.+||++|++|+++|.++||+|+++||+.+
T Consensus 83 ~G~iCl~il~~~W~p~~~i~~vL~~i~~ll~~pnp~~p~n~~aa~~~~~d~~~y~~~~~~~~~~~a~~~ 151 (399)
T 4ddg_A 83 NGSISLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAMGG 151 (399)
T ss_dssp TCBBCCGGGTTSCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHTSCT
T ss_pred CCeEeCcccccCCCccccHHHHHHHHHHHHcCCCCCchhhHHHHHHHHHCHHHHHHHHHHHHHHhhccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999864
No 39
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=3e-48 Score=286.27 Aligned_cols=142 Identities=30% Similarity=0.552 Sum_probs=136.7
Q ss_pred CchHHHHHHHHHHHhhCCCCCeEEE-eCCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccccccce
Q 031739 4 GNLPRRIVKETQRLLSEPAPGISAS-PAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNI 82 (153)
Q Consensus 4 ~~~~kRl~~E~~~l~~~~~~g~~~~-~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv 82 (153)
..+.+||++|+++| ++++|+++. +.++|+++|+++| ||++|||+||+|+++|.||++||++||+|+|.|++|||||
T Consensus 25 ~~~~~RL~kEl~~l--~~~~~i~~~~p~~~nl~~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNV 101 (180)
T 2nvu_C 25 SAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNI 101 (180)
T ss_dssp CHHHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTB
T ss_pred cHHHHHHHHHHHhc--CCCCCeEEEecccccccceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceeccCccCCC
Confidence 45789999999999 578899998 7889999999998 9999999999999999999999999999999999999999
Q ss_pred eCCCceeeccCCCCcCCcCCHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHHH
Q 031739 83 DKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKEWTRL 148 (153)
Q Consensus 83 ~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~ 148 (153)
+.+|.||+++|.++|+|++++++||.+|+++|.+|++++|+|.+||++|++|+++|.++|++|++.
T Consensus 102 ~~~G~iCl~iL~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~d~~~f~~~v~~~v~~ 167 (180)
T 2nvu_C 102 DLEGNVALNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRG 167 (180)
T ss_dssp CTTSBBCCGGGTTSCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHS
T ss_pred CCCCcEEcccccccCCCCCCHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999999999999999999999874
No 40
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=100.00 E-value=1.1e-47 Score=285.35 Aligned_cols=145 Identities=31% Similarity=0.563 Sum_probs=138.3
Q ss_pred CchHHHHHHHHHHHhhCCCCCeEEE----eCCCCCc---eEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecc
Q 031739 4 GNLPRRIVKETQRLLSEPAPGISAS----PAEDNMR---YFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTK 76 (153)
Q Consensus 4 ~~~~kRl~~E~~~l~~~~~~g~~~~----~~~~~~~---~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~ 76 (153)
+.+.+||++|+++|+ +++|+++. +.++|++ +|+++|. |++|||+||+|+++|.||++||++||+|+|.|+
T Consensus 28 s~a~~RL~kEl~~l~--~~~~i~~~~~~~p~~~nl~~~~~w~~~I~-p~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 104 (190)
T 3o2u_A 28 SAARIRLKRDLDSLD--LPPTVTLNVITSPDSADRSQSPKLEVIVR-PDEGYYNYGSINFNLDFNEVYPIEPPKVVCLKK 104 (190)
T ss_dssp CHHHHHHHHHHHTCC--CCTTEEEEEEECTTCCCTTSCCEEEEEEC-CSSSTTTTCCEEEEEECCTTTTTSCCEEEECSC
T ss_pred cHHHHHHHHHHHhcc--CCCCEEEEecCCCCCccCCcCCeEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCceeEEecC
Confidence 567899999999998 67899998 8899999 9999997 888999999999999999999999999999999
Q ss_pred ccccceeCCCceeeccCCCCcCCcCCHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHHHHhc
Q 031739 77 IYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKEWTRLYAS 151 (153)
Q Consensus 77 i~Hpnv~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 151 (153)
+|||||+.+|.||+++|.++|+|+++|++||.+|+++|.+||+++|+|.+||++|++|+++|.++||+|++.+..
T Consensus 105 i~HPnV~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~pn~~~pln~~aa~~~~~d~~~f~~~ar~~~~~~~~ 179 (190)
T 3o2u_A 105 IFHPNIDLKGNVCLNILREDWSPALDLQSIITGLLFLFLEPNPNDPLNKDAAKLLCEGEKEFAEAVRLTMSGGSI 179 (190)
T ss_dssp CCCTTBCTTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHTCHHHHHHHHHHHHBTCEE
T ss_pred cccCCCCCCCeEechhccCCCCCCCCHHHHHHHHHHHHhCCCCCcchhHHHHHHHHHCHHHHHHHHHHHHHhcCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999976543
No 41
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=100.00 E-value=3.1e-46 Score=272.76 Aligned_cols=142 Identities=23% Similarity=0.451 Sum_probs=133.0
Q ss_pred CCchHHHHHHHHHHHhhCC------------CCCeEEEeCCCCCceEEEEEeCCCCCCCC--CcEEEEEEEcCCCCCCCC
Q 031739 3 SGNLPRRIVKETQRLLSEP------------APGISASPAEDNMRYFNVMILGPSQSPYE--GGVFKLELFLPEDYPMSA 68 (153)
Q Consensus 3 ~~~~~kRl~~E~~~l~~~~------------~~g~~~~~~~~~~~~w~~~i~Gp~~tpy~--gg~f~~~i~fp~~yP~~p 68 (153)
+..+.|||++|+++|++++ +.|+.+.+.++|+++|+++|.||++|||+ ||.|+++|.||++||++|
T Consensus 6 s~~a~kRL~kEl~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP~~p 85 (167)
T 4ds2_A 6 KNISNKRIIKDLKLLLEEVDANNEANSSGSPHSTAIFSVDTDTIYNWILKVKAPADSVYGGAGNTYQLSVLFSDDYPHEP 85 (167)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHTTC----CCSSCEEEEEEESSTTEEEEEEECCTTSGGGTTCCEEEEEEECCTTTTTSC
T ss_pred cHHHHHHHHHHHHHHHhCcccccccccccCCCCcEEEEeCCCcccEEEEEEECCCCCCccCCCCEEEEEEECCCCCCCCC
Confidence 4578899999999999877 78999999999999999999999999999 999999999999999999
Q ss_pred CeEEEeccccccceeCCCceeeccCCCCcCCcCCHHHHHH-HHHHHHcC--CCCCCcccHHHHHHHHhCHHHHHHHHHH
Q 031739 69 PKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLL-SIQALLSA--PNPDDPLSDNIAKHWKADETEAVETAKE 144 (153)
Q Consensus 69 P~v~f~t~i~Hpnv~~~G~icl~~l~~~W~p~~~i~~il~-~i~~ll~~--p~~~~~~n~~aa~~~~~~~~~f~~~~~~ 144 (153)
|+|+|.|++|||||+.+|.||+++|.++|+|+++++++|. .|++++.+ |++++|+|.|||++|++|+++|.++||+
T Consensus 86 P~v~f~t~i~HPnv~~~G~iCl~il~~~W~p~~~i~~vll~~l~~l~~~~~pn~~~p~n~eaa~l~~~d~~~f~~~vrr 164 (167)
T 4ds2_A 86 PTVRFVTPVYSPLVTGEGGICDRMVNDFWTPDQHASDVIKLVLDRVFSQYKSRRDDDVNPEARHYLEKFPQDFAARVRR 164 (167)
T ss_dssp CEEEESSCCCCSSCCTTSCCCTHHHHTTCCTTSCHHHHHHHHHHHHHTSTTSCCSCCCCHHHHHHHHHCHHHHHHHHTT
T ss_pred CEEEEeCCcccccCCCCCEEEcccCcCCCCCCCChHHHHHHHHHHHHhcCCCCCcchHhHHHHHHHHHCHHHHHHHHhh
Confidence 9999999999999999999999999999999999999755 56777764 8999999999999999999999999983
No 42
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=100.00 E-value=5.7e-44 Score=282.44 Aligned_cols=150 Identities=28% Similarity=0.539 Sum_probs=139.3
Q ss_pred CCCchHHHHHHHHHHHhhCCCC----CeEEEeCCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecc-
Q 031739 2 ASGNLPRRIVKETQRLLSEPAP----GISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTK- 76 (153)
Q Consensus 2 ~~~~~~kRl~~E~~~l~~~~~~----g~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~- 76 (153)
++..+.+||++|+++|++++++ ++.+.+.++|++.|+++|.||++|||+||+|+|+|.||++||++||+|+|.|+
T Consensus 73 ~s~~~~kRL~kEl~~L~k~~p~g~~~~i~v~~~ednl~~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~T~~ 152 (323)
T 3ceg_A 73 NSAARARRLAQEAVTLSTSLPLSSSSSVFVRCDEERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLETTG 152 (323)
T ss_dssp CCHHHHHHHHHHHHHHHHHCCCCSSCCEEEEEESSCTTEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEECCST
T ss_pred CCHHHHHHHHHHHHHHHhCCCCCcccceeecccCCCccccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEeccC
Confidence 3456889999999999998776 45677889999999999999999999999999999999999999999999998
Q ss_pred ----ccccceeCCCceeeccCC-------CCcCCcC-CHHHHHHHHHHHHc--CCCCCCcccHHH--HHHHHhCHHHHHH
Q 031739 77 ----IYHPNIDKLGRICLDILK-------DKWSPAL-QIRTVLLSIQALLS--APNPDDPLSDNI--AKHWKADETEAVE 140 (153)
Q Consensus 77 ----i~Hpnv~~~G~icl~~l~-------~~W~p~~-~i~~il~~i~~ll~--~p~~~~~~n~~a--a~~~~~~~~~f~~ 140 (153)
+|||||+.+|.||+++|. ++|+|++ +|++||.+|++||. +|++++|+|.++ +.+|.+|+++|.+
T Consensus 153 g~~~ifHPNV~~~G~ICLsiL~~~~g~~~e~WsPa~stI~~VLlsIqsLL~~~~Pn~~dP~~~~a~a~~~~~~d~~~Y~~ 232 (323)
T 3ceg_A 153 GHSVRFNPNLYNDGKVCLSILNTWHGRPEEKWNPQTSSFLQVLVSVQSLILVAEPYFNEPGYERSRGTPSGTQSSREYDG 232 (323)
T ss_dssp TTTCCCBTTBCTTCBBCCGGGTSSCCCGGGSCCTTTCCHHHHHHHHHHHTSCSSGGGGSTTGGGGTTSHHHHHHHHHHHH
T ss_pred CCcccccCCCCcCCeEechhhccccCCCcCCCCcCcCCHHHHHHHHHHHHcCCCCCCCCccCHHHHHhhhhhhhHHHHHH
Confidence 999999999999999997 6899999 89999999999996 677799999987 6899999999999
Q ss_pred HHHHHHHHHhc
Q 031739 141 TAKEWTRLYAS 151 (153)
Q Consensus 141 ~~~~~~~~~a~ 151 (153)
+|++|+++||+
T Consensus 233 ~vr~~t~k~A~ 243 (323)
T 3ceg_A 233 NIRQATVKWAM 243 (323)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHhh
Confidence 99999999996
No 43
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=100.00 E-value=3.3e-44 Score=259.14 Aligned_cols=131 Identities=25% Similarity=0.437 Sum_probs=120.7
Q ss_pred CCchHHHHHHHHHHHhhC-CCCCeEEEeCC-C--CCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecccc
Q 031739 3 SGNLPRRIVKETQRLLSE-PAPGISASPAE-D--NMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIY 78 (153)
Q Consensus 3 ~~~~~kRl~~E~~~l~~~-~~~g~~~~~~~-~--~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~ 78 (153)
...+.+||++|+++|+++ +++|+++.+.+ + |++.|+++|.||++|||+||+|+++|.||++||++||+|+|.|+||
T Consensus 19 ~~~~~~RL~kEl~~l~~~~~~~~i~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~ 98 (156)
T 2q0v_A 19 IVPRSFRLLDELERGQKGNVSEGVSFGLESADDITLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFDTKIE 98 (156)
T ss_dssp CCCHHHHHHHHHHHHHCC-CCTTEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCC
T ss_pred cchHHHHHHHHHHHHHhCCCCCCeEEEECCCccccceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEEcccc
Confidence 457889999999999998 78899998853 3 5999999999999999999999999999999999999999999999
Q ss_pred ccceeCCCce---eeccCCCCcCCcCCHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhC
Q 031739 79 HPNIDKLGRI---CLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKAD 134 (153)
Q Consensus 79 Hpnv~~~G~i---cl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~aa~~~~~~ 134 (153)
||||+.+|.| |+++|. +|+|+++|++||.+|+++|.+|++++|+|.+||++|++|
T Consensus 99 HPNV~~~G~icisCL~iL~-~WsP~~ti~~vL~sI~~ll~~Pn~~~p~n~~aa~~y~~n 156 (156)
T 2q0v_A 99 MSCVDNCGRVIKNNLHILK-NWNRNYTIETILISLRQEMLSSANKRLPQPNEGEVYSNN 156 (156)
T ss_dssp CTTBCTTSBBCGGGSHHHH-TCCTTCCHHHHHHHHHHHTTSTTTTTCCCCCTTCBC---
T ss_pred cCCCccCCeEehhhccccc-CCCCcCcHHHHHHHHHHHHhCCCCCCcCChHHHHHhhhC
Confidence 9999999999 888887 599999999999999999999999999999999998875
No 44
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=100.00 E-value=3.8e-44 Score=254.35 Aligned_cols=130 Identities=25% Similarity=0.419 Sum_probs=118.1
Q ss_pred CCCCchHHHHHHHHHHHhhC-CCCCeEEEeCC-C--CCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecc
Q 031739 1 MASGNLPRRIVKETQRLLSE-PAPGISASPAE-D--NMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTK 76 (153)
Q Consensus 1 m~~~~~~kRl~~E~~~l~~~-~~~g~~~~~~~-~--~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~ 76 (153)
|++..+.+||++|+++++++ +++|+++.+.+ + |+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+
T Consensus 2 m~~~~~~~RL~kEl~~l~~~~~~~~~~~~~~~~~d~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 81 (138)
T 1jat_B 2 MSKVPRNFRLLEELEKGEKGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISK 81 (138)
T ss_dssp -CCCCHHHHHHHHHHHHHC----CCEEEEESSTTCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESBC
T ss_pred cchHHHHHHHHHHHHHHHhcCCCCCEEEEeCCCCCCcceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEEcc
Confidence 77788899999999999998 78999998853 3 48999999999999999999999999999999999999999999
Q ss_pred ccccceeCC-Cce--eeccCCCCcCCcCCHHHHHHHHHHHHcCCCCCCcccHHHHHHH
Q 031739 77 IYHPNIDKL-GRI--CLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHW 131 (153)
Q Consensus 77 i~Hpnv~~~-G~i--cl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~aa~~~ 131 (153)
+|||||+.+ |.| |++++. +|+|++++++||.+|+++|.+||+++|+|.+||++|
T Consensus 82 i~HPnv~~~~G~i~~cL~~l~-~W~p~~~i~~vl~~i~~ll~~pn~~~p~~~~~~~~y 138 (138)
T 1jat_B 82 INLPCVNPTTGEVQTDFHTLR-DWKRAYTMETLLLDLRKEMATPANKKLRQPKEGETF 138 (138)
T ss_dssp CCCTTBCTTTCBBCTTSHHHH-TCCTTCCHHHHHHHHHHHHTSHHHHTSCCCCTTCBC
T ss_pred cccCCEeCCCCEEeeecccCC-CCCCcCcHHHHHHHHHHHHcCCCCCCCCCcchhhcC
Confidence 999999985 999 898876 899999999999999999999999999999988654
No 45
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=100.00 E-value=8.8e-43 Score=243.51 Aligned_cols=117 Identities=34% Similarity=0.622 Sum_probs=106.4
Q ss_pred CchHHHHHHHHHHHhhCCCCCeEEEeCCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccc-cccce
Q 031739 4 GNLPRRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKI-YHPNI 82 (153)
Q Consensus 4 ~~~~kRl~~E~~~l~~~~~~g~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i-~Hpnv 82 (153)
+.+.+||++|++++++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++ |||||
T Consensus 5 ~~a~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv 84 (125)
T 2fo3_A 5 GNANYRIQKELHNFLNNPPINCTLDVHPNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPKHTHV 84 (125)
T ss_dssp ----CHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCBTTB
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEeCcchhhhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCCCCCcC
Confidence 34679999999999999999999999999999999999999999999999999999999999999999999997 99999
Q ss_pred eCCCceeeccCCCCcCCcCCHHHHHHHHHHHHcCCCCC
Q 031739 83 DKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120 (153)
Q Consensus 83 ~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~~ 120 (153)
+.+|.||+++|.++|+|++++++||.+|+++|.+|+.+
T Consensus 85 ~~~G~iCl~iL~~~W~P~~~i~~vl~si~~ll~~p~~~ 122 (125)
T 2fo3_A 85 YSNGDICLSLLGDDYNPSLSISGLVLSIISMLSSAKEK 122 (125)
T ss_dssp CTTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHC-----
T ss_pred CCCCEEEchhcCCCCCCCCcHHHHHHHHHHHHhCcccc
Confidence 99999999999999999999999999999999999765
No 46
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=5.5e-42 Score=242.62 Aligned_cols=116 Identities=33% Similarity=0.613 Sum_probs=112.2
Q ss_pred CchHHHHHHHHHHHhhCCCCCeEEEeCCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccc-cccce
Q 031739 4 GNLPRRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKI-YHPNI 82 (153)
Q Consensus 4 ~~~~kRl~~E~~~l~~~~~~g~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i-~Hpnv 82 (153)
+.+.+||++|+++++++++.|+.+.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++ |||||
T Consensus 19 ~~~~~RL~kEl~~l~~~~~~~~~~~~~~~nl~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv 98 (136)
T 2h2y_A 19 GNANYRIQKELNNFLKNPPINCTIDVHPSNIRIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKPPKHTHV 98 (136)
T ss_dssp TSHHHHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCCTTB
T ss_pred hHHHHHHHHHHHHHHhCCCCCeEEEeccccccccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCCcC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999996 99999
Q ss_pred eCCCceeeccCCCCcCCcCCHHHHHHHHHHHHcCCCC
Q 031739 83 DKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 119 (153)
Q Consensus 83 ~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~~p~~ 119 (153)
+.+|.||+++|.++|+|++++++||.+|++||.+|+.
T Consensus 99 ~~~G~ICl~iL~~~WsP~~ti~~vL~si~sll~~p~~ 135 (136)
T 2h2y_A 99 YSNGDICLSVLGDDYNPSLSISGLILSIISMLSSAKE 135 (136)
T ss_dssp CTTCCBCCGGGTTTCCTTCCHHHHHHHHHHHHSSSCC
T ss_pred CCCCEEECccccCCCCCCCcHHHHHHHHHHHHhCcCc
Confidence 9999999999999999999999999999999999974
No 47
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=100.00 E-value=2.5e-42 Score=250.00 Aligned_cols=125 Identities=23% Similarity=0.387 Sum_probs=116.4
Q ss_pred CchHHHHHHHHHHHhhCCCCC-eEEEe-CCCC--CceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccccc
Q 031739 4 GNLPRRIVKETQRLLSEPAPG-ISASP-AEDN--MRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYH 79 (153)
Q Consensus 4 ~~~~kRl~~E~~~l~~~~~~g-~~~~~-~~~~--~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~H 79 (153)
..+.+||++|+++|++++++| +.+.+ .++| +++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++||
T Consensus 24 ~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~H 103 (160)
T 2a4d_A 24 VPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINM 103 (160)
T ss_dssp HHHHHHHHHHHHHHHSCCTTSSEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCC
T ss_pred chHHHHHHHHHHHHHhCCCCCcEEEEecCCccccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEecCcee
Confidence 357789999999999998888 77777 4454 8999999999999999999999999999999999999999999999
Q ss_pred ccee-CCCceeeccCC--CCcCCcCCHHHHHHHHHHHHc-CCCCCCcccHHHH
Q 031739 80 PNID-KLGRICLDILK--DKWSPALQIRTVLLSIQALLS-APNPDDPLSDNIA 128 (153)
Q Consensus 80 pnv~-~~G~icl~~l~--~~W~p~~~i~~il~~i~~ll~-~p~~~~~~n~~aa 128 (153)
|||+ .+|.||+++|. ++|+|+++|++||.+|+++|. +||+++|+|.|||
T Consensus 104 PNV~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~~ll~~~pn~~~P~n~eaa 156 (160)
T 2a4d_A 104 NGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQ 156 (160)
T ss_dssp TTBCTTTCBBCGGGSHHHHTCCTTCCHHHHHHHHHHHHTSTTTTTCCCCCTTC
T ss_pred CCEECCCCEEehhhcCCccCCCccCcHHHHHHHHHHHHccCCCCCCCCChhhc
Confidence 9999 69999999997 899999999999999999995 6999999999987
No 48
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=100.00 E-value=1e-41 Score=249.13 Aligned_cols=125 Identities=23% Similarity=0.387 Sum_probs=116.2
Q ss_pred CchHHHHHHHHHHHhhCCCCC-eEEEe-CCCC--CceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccccc
Q 031739 4 GNLPRRIVKETQRLLSEPAPG-ISASP-AEDN--MRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYH 79 (153)
Q Consensus 4 ~~~~kRl~~E~~~l~~~~~~g-~~~~~-~~~~--~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~H 79 (153)
..+.+||++|+++|++++++| +.+.+ .++| +++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++||
T Consensus 34 ~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~H 113 (170)
T 2hlw_A 34 VPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINM 113 (170)
T ss_dssp CCHHHHHHHHHHHHHHCCGGGCEEEEESSTTCSSCCBEEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEECBCCCC
T ss_pred CHHHHHHHHHHHHHHhCCCCCcEEEEecCcccccceeeEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEeccccc
Confidence 357899999999999998888 66776 4554 8999999999999999999999999999999999999999999999
Q ss_pred ccee-CCCceeeccCC--CCcCCcCCHHHHHHHHHHHHc-CCCCCCcccHHHH
Q 031739 80 PNID-KLGRICLDILK--DKWSPALQIRTVLLSIQALLS-APNPDDPLSDNIA 128 (153)
Q Consensus 80 pnv~-~~G~icl~~l~--~~W~p~~~i~~il~~i~~ll~-~p~~~~~~n~~aa 128 (153)
|||+ .+|.||+++|. +.|+|+++|++||.+|+++|. .||+++|+|.|||
T Consensus 114 PNV~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~~ll~~~pn~~~P~n~eaa 166 (170)
T 2hlw_A 114 NGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQ 166 (170)
T ss_dssp SSBCSSSCBBCTTTCHHHHTCCSSCCHHHHHHHHHHHHHSTTTSSSCCCSSCC
T ss_pred CCEeCCCCEEEhhhcCCCCCCCccCcHHHHHHHHHHHHccCCCCCCCCCcccc
Confidence 9999 79999999997 899999999999999999997 5899999999987
No 49
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=5.1e-41 Score=237.44 Aligned_cols=109 Identities=35% Similarity=0.678 Sum_probs=105.2
Q ss_pred HHHHHHHHHHHhhCCCCCeEEE--eCCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecccc--ccce
Q 031739 7 PRRIVKETQRLLSEPAPGISAS--PAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIY--HPNI 82 (153)
Q Consensus 7 ~kRl~~E~~~l~~~~~~g~~~~--~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~--Hpnv 82 (153)
.+||++|+++|++++++|+++. +.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++| ||||
T Consensus 24 ~~RL~kEl~~l~~~~~~gi~v~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~~~HPNV 103 (136)
T 2a7l_A 24 QKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHV 103 (136)
T ss_dssp CHHHHHHHHHHHHSCCTTCCCCTTCCCCSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESSCCCCBTTB
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEeeCccccceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCCCcCCCccC
Confidence 4999999999999999999965 78899999999999999999999999999999999999999999999999 9999
Q ss_pred eCCCceeeccCCCCcCCcCCHHHHHHHHHHHHc
Q 031739 83 DKLGRICLDILKDKWSPALQIRTVLLSIQALLS 115 (153)
Q Consensus 83 ~~~G~icl~~l~~~W~p~~~i~~il~~i~~ll~ 115 (153)
+.+|.||+++|.++|+|++++++||.+|++||.
T Consensus 104 ~~~G~ICL~iL~~~WsP~~ti~~vL~sI~slL~ 136 (136)
T 2a7l_A 104 YSNGHICLSILTEDWSPALSVQSVCLSIISMLS 136 (136)
T ss_dssp CTTCBBCCGGGTTTCCTTSCHHHHHHHHHHHTC
T ss_pred CCCCeEEchhcCCCCCCCCcHHHHHHHHHHHhC
Confidence 999999999999999999999999999999974
No 50
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=4.6e-39 Score=238.49 Aligned_cols=117 Identities=26% Similarity=0.604 Sum_probs=105.1
Q ss_pred CchHHHHHHHHHHHhhCCCCCeEEEeCCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecccccccee
Q 031739 4 GNLPRRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNID 83 (153)
Q Consensus 4 ~~~~kRl~~E~~~l~~~~~~g~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~ 83 (153)
..+.+||++|+++|++++++||.+.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+ ||+|+
T Consensus 13 ~~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T~--~~~~~ 90 (187)
T 2f4w_A 13 TTATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGRFK 90 (187)
T ss_dssp -CHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC--CSSBC
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccCC--Cceec
Confidence 4688999999999999999999999999999999999999999999999999999999999999999999998 99999
Q ss_pred CCCceeeccC---CCCcCCcCCHHHHHHHHHHHHcCCCCCCc
Q 031739 84 KLGRICLDIL---KDKWSPALQIRTVLLSIQALLSAPNPDDP 122 (153)
Q Consensus 84 ~~G~icl~~l---~~~W~p~~~i~~il~~i~~ll~~p~~~~~ 122 (153)
.+|.||+++| .+.|+|+++|++||.+|+++|.+|+++..
T Consensus 91 ~~G~ICL~iL~~~~~~W~P~~ti~~vL~si~sll~~p~p~~g 132 (187)
T 2f4w_A 91 CNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPTLG 132 (187)
T ss_dssp TTSCBC----------CCTTCCHHHHHHHHHHHHHSCCCCTT
T ss_pred cCCeEeeeccccCccCCCCcCcHHHHHHHHHHHhcCCCCCCc
Confidence 9999999999 68999999999999999999999988643
No 51
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=100.00 E-value=1.1e-40 Score=246.85 Aligned_cols=141 Identities=18% Similarity=0.308 Sum_probs=127.1
Q ss_pred CCCchHHHHHHHHHHHhhCC---CCCeEEEeCCCCCceEEEEEeCC-CCCCCCC-----------cEEEEEEEcCCCCCC
Q 031739 2 ASGNLPRRIVKETQRLLSEP---APGISASPAEDNMRYFNVMILGP-SQSPYEG-----------GVFKLELFLPEDYPM 66 (153)
Q Consensus 2 ~~~~~~kRl~~E~~~l~~~~---~~g~~~~~~~~~~~~w~~~i~Gp-~~tpy~g-----------g~f~~~i~fp~~yP~ 66 (153)
++..+.+||++|+++|++++ +.|+.+.+.++|+++|+++|.|| ++|||+| |.|+++|.||++||+
T Consensus 24 ~s~~a~~RL~kEl~~l~~~~~~~~~~~~~~p~~dnl~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~~YP~ 103 (186)
T 1zuo_A 24 GSVQASDRLMKELRDIYRSQSYKTGIYSVELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFPF 103 (186)
T ss_dssp CCHHHHHHHHHHHHHHHTSHHHHTTSEEEEEETTEEEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCTTTTS
T ss_pred ccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEcCCccceeEEEEECCCCCCCccccchhhccccCceEEEEEEECCCCCCC
Confidence 34568899999999999988 68899999999999999999997 9999998 899999999999999
Q ss_pred CCCeEEEecccccc-ceeCCCceeeccCC-CCcCCcCCHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhCHHHHHHHHHH
Q 031739 67 SAPKVRFLTKIYHP-NIDKLGRICLDILK-DKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKE 144 (153)
Q Consensus 67 ~pP~v~f~t~i~Hp-nv~~~G~icl~~l~-~~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~~~ 144 (153)
+||+|+|.+++||| ||+.+|.||+++|. ++|+|+++|++||.+|+++|.+|+... .|.+++.+|.+++++
T Consensus 104 ~PP~V~f~tpi~hPnnV~~~G~ICL~iL~~~~WsP~~ti~~VL~sI~slL~~p~a~~--------~~~~~~~~Y~~~~~~ 175 (186)
T 1zuo_A 104 DPPFVRVVLPVLSGGYVLGGGALCMELLTKQGWSSAYSIESVIMQINATLVKGKARV--------QFGANKNQYNLARAQ 175 (186)
T ss_dssp SCCEEEEEESCEESTTBCGGGBBCCGGGSTTTCCTTSCHHHHHHHHHHHHHHTTCEE--------CTTCCTTCCCHHHHH
T ss_pred CCCeEEEeCCccCCCccCCCCcEEeccCCCCCCCCcCcHHHHHHHHHHHHcCCChhH--------hhccCHHHHhHHHHH
Confidence 99999999999999 69999999999997 799999999999999999999986542 455567888888888
Q ss_pred HHHHHh
Q 031739 145 WTRLYA 150 (153)
Q Consensus 145 ~~~~~a 150 (153)
.+.+.+
T Consensus 176 ~~~~~~ 181 (186)
T 1zuo_A 176 QSYNSI 181 (186)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 877654
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.95 E-value=2.1e-29 Score=180.61 Aligned_cols=113 Identities=17% Similarity=0.224 Sum_probs=97.5
Q ss_pred HHHHHHHHHHHhhCCCCCeEEEeCCCCCceEEEEEeCCCCCCCCCc----------EEEEEEEcCCCCCCCCCeEEEecc
Q 031739 7 PRRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGG----------VFKLELFLPEDYPMSAPKVRFLTK 76 (153)
Q Consensus 7 ~kRl~~E~~~l~~~~~~g~~~~~~~~~~~~w~~~i~Gp~~tpy~gg----------~f~~~i~fp~~yP~~pP~v~f~t~ 76 (153)
.+||++|++.|++ ++.+..+|+..|..++.||+||+|+|| .|.++|.||++||.+||+|+|.+.
T Consensus 34 ~~RL~eE~k~L~k------~v~p~k~n~~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV~F~~~ 107 (172)
T 2z6o_A 34 VQRLKEEYQSLIR------YVENNKNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIAVPEL 107 (172)
T ss_dssp HHHHHHHHHHHHH------HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGG
T ss_pred HHHHHHHHHHHHH------HhccCccccceeEEeecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCCeeeeCCC
Confidence 8999999999999 467778899999999999999999999 999999999999999999999997
Q ss_pred -ccccceeCCCceeeccCC-C---CcCCcCCHHHHHHHHHHHHcCCCCCCcccHHHHHHHHh
Q 031739 77 -IYHPNIDKLGRICLDILK-D---KWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKA 133 (153)
Q Consensus 77 -i~Hpnv~~~G~icl~~l~-~---~W~p~~~i~~il~~i~~ll~~p~~~~~~n~~aa~~~~~ 133 (153)
+||||||.+|+||++++. . .|+|.++|.++|.- .+..++..|+..+...
T Consensus 108 ~~~hpnmY~~G~ICLdIL~kp~Ws~~~P~~~IahiL~l--------gl~pwla~eip~lv~~ 161 (172)
T 2z6o_A 108 DGKTAKMYRGGKICLTDHFKPLWARNVPKFGLAHLMAL--------GLGPWLAVEIPDLIQK 161 (172)
T ss_dssp TTTCSSBCTTSBBCCCTTHHHHHHHHTTSCCHHHHHHH--------THHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCcEechhhccccccccCCccCHHHHHhh--------ccCchhhhhhHHHHHc
Confidence 999999999999999994 3 45599999999843 2233456666666544
No 53
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.83 E-value=2.2e-20 Score=134.66 Aligned_cols=114 Identities=24% Similarity=0.422 Sum_probs=93.1
Q ss_pred HHHHHHHHHHHhhCCC---CCeEEEeCCCCCceEEEEEeCCCCCCCCCcE---EEEEEEcCCCCCCCCCeEEEecc----
Q 031739 7 PRRIVKETQRLLSEPA---PGISASPAEDNMRYFNVMILGPSQSPYEGGV---FKLELFLPEDYPMSAPKVRFLTK---- 76 (153)
Q Consensus 7 ~kRl~~E~~~l~~~~~---~g~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~---f~~~i~fp~~yP~~pP~v~f~t~---- 76 (153)
.+|..+|...+.+.-+ +...+...+|....+-+.+.|.-.++|+|++ |.+.|.||++||++||.|.|.++
T Consensus 30 ~~~~~~dv~~~l~~yp~L~p~t~~yt~~dG~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~m 109 (162)
T 3r3q_A 30 GRTTFHDSLALLDNFHSLRPRTRVFTHSDGTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFDM 109 (162)
T ss_dssp HHHHHHHHHHHHHHCTTEEEEEEEEECTTSCEEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGCCT
T ss_pred hhHHHHHHHHHHHhCCCCceeeeeEEcCCCChheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCCccc
Confidence 4677888877765322 2233445567667777777777779999998 88999999999999999988651
Q ss_pred ------cc-ccceeCCCceeeccCCCCcCC-cCCHHHHHHHHHHHHcCCCCCC
Q 031739 77 ------IY-HPNIDKLGRICLDILKDKWSP-ALQIRTVLLSIQALLSAPNPDD 121 (153)
Q Consensus 77 ------i~-Hpnv~~~G~icl~~l~~~W~p-~~~i~~il~~i~~ll~~p~~~~ 121 (153)
|+ |||||.+|+||+++|. +|++ ..++.++|.+|.++|.+|+++.
T Consensus 110 ~~~~~~I~~hpnVD~~G~I~lpyL~-~W~p~~s~L~~ll~~l~~lf~ep~~d~ 161 (162)
T 3r3q_A 110 NTISSSLPIQEYIDSNGWIALPILH-AWDPAAMNLIMVVQELMSLLHEPPQDQ 161 (162)
T ss_dssp TTSCTTSTHHHHBCTTSBBCCGGGG-SCCGGGCCHHHHHHHHHHTTSCCCCCC
T ss_pred cccccccCCCCCCCCCCcEeCcccc-cCCCCcCcHHHHHHHHHHHhcCCCCCC
Confidence 77 9999999999999996 6988 6899999999999999999875
No 54
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.76 E-value=6.1e-20 Score=128.96 Aligned_cols=96 Identities=19% Similarity=0.349 Sum_probs=77.7
Q ss_pred hHHHHHHHHHHHhhCCCCCeEEEeCCCCCceEEEEEeCCCCCCCCCc----------EEEEEEEcCCCCCCCCCeEEEec
Q 031739 6 LPRRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGG----------VFKLELFLPEDYPMSAPKVRFLT 75 (153)
Q Consensus 6 ~~kRl~~E~~~l~~~~~~g~~~~~~~~~~~~w~~~i~Gp~~tpy~gg----------~f~~~i~fp~~yP~~pP~v~f~t 75 (153)
-..||.+||..|-+ ++....++-..|...+.||.||+|.|+ .|.+++.||.+||.+||.|+|.+
T Consensus 35 w~~RlkeEy~alI~------yv~~nK~~d~dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI~Fp~ 108 (168)
T 3kpa_A 35 WTARLKEEYASLIT------YVEHNKASDSHWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEIALPE 108 (168)
T ss_dssp HHHHHHHHHHHHHH------HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGG
T ss_pred HHHHHHHHHHHHHH------HHHhcccccCCeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEeeccc
Confidence 35899999999876 233334455679999999999999999 99999999999999999999999
Q ss_pred c-ccccceeCCCceeeccCC-CCc---CCcCCHHHHH
Q 031739 76 K-IYHPNIDKLGRICLDILK-DKW---SPALQIRTVL 107 (153)
Q Consensus 76 ~-i~Hpnv~~~G~icl~~l~-~~W---~p~~~i~~il 107 (153)
. .+||++|.+|+||++++. .-| .|.++|...|
T Consensus 109 ldgkt~kmYr~GkICLdIhwkPlW~~n~P~fGiahal 145 (168)
T 3kpa_A 109 LEGKTVKMYRGGKICMTTHFFPLWARNVPYFGISHVL 145 (168)
T ss_dssp GTTTCSSEETTTEECCCTTHHHHHHHTTTTCCHHHHH
T ss_pred ccCcCccccCCCcEEeccccchhhHhcCCchhHHHHH
Confidence 5 899999999999999862 112 3445666554
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=99.55 E-value=7.5e-15 Score=104.09 Aligned_cols=80 Identities=20% Similarity=0.462 Sum_probs=70.8
Q ss_pred CCCCceEEEEEeCCCCCCCCCcEEEE--EEEcCCCCCCCCCeEEEecc------ccccceeCCCceeeccCCCCcCC-cC
Q 031739 31 EDNMRYFNVMILGPSQSPYEGGVFKL--ELFLPEDYPMSAPKVRFLTK------IYHPNIDKLGRICLDILKDKWSP-AL 101 (153)
Q Consensus 31 ~~~~~~w~~~i~Gp~~tpy~gg~f~~--~i~fp~~yP~~pP~v~f~t~------i~Hpnv~~~G~icl~~l~~~W~p-~~ 101 (153)
..+++.|.++|. .+|+|++|.+ .|.||++||++||.| |.++ ..|||||.+|++|++.|.+ |++ ..
T Consensus 50 ~~~LL~l~GtIp----v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I~~~~~Vd~~G~i~lpyL~~-W~~~~s 123 (146)
T 3obq_A 50 SRELMNLTGTIP----VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTIKTGKHVDANGKIYLPYLHE-WKHPQS 123 (146)
T ss_dssp TCEEEEEEEEEE----EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEECCBTTBCTTCBBCCHHHHT-CCTTTC
T ss_pred hheEEEEEEEee----eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCEECCCCCCCCCCCEecccccc-cCCCCC
Confidence 468899999997 7899999995 999999999999999 6655 4899999999999999975 987 78
Q ss_pred CHHHHHHHHHHHHcC
Q 031739 102 QIRTVLLSIQALLSA 116 (153)
Q Consensus 102 ~i~~il~~i~~ll~~ 116 (153)
++.+++..+++.|.+
T Consensus 124 nL~~ll~~l~~~F~~ 138 (146)
T 3obq_A 124 DLLGLIQVMIVVFGD 138 (146)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhh
Confidence 999999999999863
No 56
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.10 E-value=0.008 Score=40.69 Aligned_cols=68 Identities=18% Similarity=0.182 Sum_probs=44.9
Q ss_pred hHHHHHHHHHHHhhCCCCCeEEEeCCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEec
Q 031739 6 LPRRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLT 75 (153)
Q Consensus 6 ~~kRl~~E~~~l~~~~~~g~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t 75 (153)
...+...|+..|+.--+..+.+. ++....+.+.|..-.+..-+.-.+.+.+.||++||.+||.|...+
T Consensus 11 ~~e~q~~EleaL~sIy~d~~~~~--~~~~~~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 78 (128)
T 2ebm_A 11 YGEEQRNELEALESIYPDSFTVL--SENPPSFTITVTSEAGENDETVQTTLKFTYSEKYPDEAPLYEIFS 78 (128)
T ss_dssp HHHHHHHHHHHHHHHCSSSEEEC--CSSSCEEEECCBCCCCTTSCCCBEEEEEECCSSTTTSCCEEEEEE
T ss_pred hHHHHHHHHHHHHHHccCceEEc--cCCCCEEEEEEecCCCCCcCceeEEEEEEeCCCCCCCCceEEEEc
Confidence 45677888888886444444442 333466777765222222234478899999999999999998754
No 57
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=96.59 E-value=0.018 Score=38.85 Aligned_cols=72 Identities=14% Similarity=0.157 Sum_probs=45.5
Q ss_pred chHHHHHHHHHHHhhCCCCCeEEEeCC--CCCceEEEEEeCCCCCCCC--CcEEEEEEEcCCCCCCCCCeEEEecc
Q 031739 5 NLPRRIVKETQRLLSEPAPGISASPAE--DNMRYFNVMILGPSQSPYE--GGVFKLELFLPEDYPMSAPKVRFLTK 76 (153)
Q Consensus 5 ~~~kRl~~E~~~l~~~~~~g~~~~~~~--~~~~~w~~~i~Gp~~tpy~--gg~f~~~i~fp~~yP~~pP~v~f~t~ 76 (153)
....+...|+..|+.--+..+.+.... .+...+.+.|..+.+..-+ .-.+.+.+.+|++||..+|.|...+.
T Consensus 8 e~~e~~~~EleaL~SIY~de~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~~~~~ 83 (128)
T 2day_A 8 EEDWVLPSEVEVLESIYLDELQVIKGNGRTSPWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRNP 83 (128)
T ss_dssp CCCCHHHHHHHHHHHHSTTTEEEECCTTSSCCEEEEEEECCSCCSSSSCCCCEEEEEEEECSSTTSSCCEEEEEEE
T ss_pred chHHHHHHHHHHHHHHCCCceEEecCCCCCCCeEEEEEEecCCCCCccccceeEEEEEEcCCCCCCCCCCeEEEcC
Confidence 344568889988887544555543221 2344566666522221111 24788999999999999999988763
No 58
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=96.34 E-value=0.054 Score=36.99 Aligned_cols=67 Identities=13% Similarity=0.191 Sum_probs=41.9
Q ss_pred HHHHHHHHHHhhCCCCCeEEEeCC------CCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEec
Q 031739 8 RRIVKETQRLLSEPAPGISASPAE------DNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLT 75 (153)
Q Consensus 8 kRl~~E~~~l~~~~~~g~~~~~~~------~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t 75 (153)
.+-..|+..|+.--+..+.+.-.. +....+.+.|.+ ....-..-.+.+.+.+|++||..+|.|.+.+
T Consensus 13 e~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~f~I~l~~-~~~~~~~~~~~L~~~~p~~YP~~~P~i~l~~ 85 (138)
T 2yz0_A 13 EIQCNELEAIRSIYMDDFTDLTKRKSSWDKQPQIIFEITLRS-VDKEPVESSITLHFAMTPMYPYTAPEIEFKN 85 (138)
T ss_dssp HHHHHHHHHHHTTSSSSEECCSTTSSSSCSSCCSCEEEEEEC-SSCSSCCCEEEEEEECCSSTTSSCCEEEEEC
T ss_pred HHHHHHHHHHHHHChhhheecccccccccCCCCcEEEEEEec-CCCCCCceEEEEEEECCCCCCCCCCeEEEec
Confidence 445677777776433333322111 134667788873 2222123478899999999999999998765
No 59
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=96.04 E-value=0.056 Score=37.88 Aligned_cols=23 Identities=22% Similarity=0.346 Sum_probs=20.9
Q ss_pred EEEEEEEcCCCCCCCCCeEEEec
Q 031739 53 VFKLELFLPEDYPMSAPKVRFLT 75 (153)
Q Consensus 53 ~f~~~i~fp~~yP~~pP~v~f~t 75 (153)
.+.++|.+|.+||..+|.|...+
T Consensus 76 ~i~L~v~lP~~YP~~~P~i~l~~ 98 (154)
T 2daw_A 76 KIDLQVTMPHSYPYLALQLFGRS 98 (154)
T ss_dssp EEEEEEEECSSTTSSCCEEEEEC
T ss_pred eEEEEEEcCCCCCCCCCcEEEEe
Confidence 89999999999999999998655
No 60
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=95.20 E-value=0.26 Score=35.78 Aligned_cols=84 Identities=15% Similarity=0.242 Sum_probs=60.2
Q ss_pred HHHHHHHHHHhhCCCCCeEEEeCCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccccccceeCCCc
Q 031739 8 RRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDKLGR 87 (153)
Q Consensus 8 kRl~~E~~~l~~~~~~g~~~~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~G~ 87 (153)
.+|.+|+.+|-=+. +.-.+.++....+.+.. =.|....++|.++.+||.++|.+...-|+ |
T Consensus 4 ~~li~Ei~~iGW~~-----l~~id~~~~~i~l~~~D-----~~gR~H~l~v~l~~~yp~~~P~~~~DlP~--~------- 64 (186)
T 3zqs_A 4 SSLIEEIGTLGWDK-----LVYADTCFSTIKLKAED-----ASGREHLITLKLKAKYPAESPDYFVDFPV--P------- 64 (186)
T ss_dssp CSHHHHHHHHCGGG-----EEEECTTSSEEEEEEEC-----TTSCEEEEEEECCTTTTTSCCEEECCCSS--C-------
T ss_pred HHHHHHHHHhCCce-----eeeecCCccEEEEEEEe-----CCCCeEEEEEEECCCCCCCCCeeEEcCCC--C-------
Confidence 36788888873321 22335678888888873 34678999999999999999987655442 1
Q ss_pred eeeccCCCCcCCcCCHHHHHHHHHHHHc
Q 031739 88 ICLDILKDKWSPALQIRTVLLSIQALLS 115 (153)
Q Consensus 88 icl~~l~~~W~p~~~i~~il~~i~~ll~ 115 (153)
+.-.|++..++.+++...+..+.
T Consensus 65 -----~~~~w~~~ssL~~v~~qF~~~Le 87 (186)
T 3zqs_A 65 -----FCASWTPQSSLISIYSQFLAAIE 87 (186)
T ss_dssp -----CCCCCCTTCCHHHHHHHHHHHHH
T ss_pred -----cccccCCCccHHHHHHHHHHHHH
Confidence 11379999999988877766653
No 61
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.04 E-value=0.13 Score=34.67 Aligned_cols=68 Identities=16% Similarity=0.175 Sum_probs=41.6
Q ss_pred hHHHHHHHHHHHhhCCCC--CeEE-EeCCCCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEe
Q 031739 6 LPRRIVKETQRLLSEPAP--GISA-SPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFL 74 (153)
Q Consensus 6 ~~kRl~~E~~~l~~~~~~--g~~~-~~~~~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~ 74 (153)
+..+...|+..|+.--+. .+.+ .....+...+.+.|.. .+..-..-.+.+.+.+|++||..+|.|...
T Consensus 8 ~~e~q~~EleaL~SIy~d~~e~~~~~~~~~~~~~f~i~l~~-~~~~~~~~~~~L~~~~p~~YP~~~P~i~l~ 78 (128)
T 2ebk_A 8 MAEPVQEELSVLAAIFCRPHEWEVLSRSETDGTVFRIHTKA-EGFMDADIPLELVFHLPVNYPSCLPGISIN 78 (128)
T ss_dssp SCHHHHHHHHHHHHHHCCTTTCCCSEECSSSCEEEEEEEEC-CTTTTCCCEEEEEEEECSSTTSSCCCCCCC
T ss_pred HHHHHHHHHHHHHHHcCCCCceEEecCCCCCCCeEEEEecC-CCCCCCCeEEEEEEECCCCCCCCCCeEEEE
Confidence 345667788877753221 2332 1122234578888863 321111247899999999999999988654
No 62
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=93.69 E-value=0.53 Score=31.77 Aligned_cols=69 Identities=16% Similarity=0.171 Sum_probs=42.3
Q ss_pred hHHHHHHHHHHHhhCCCCCeEEEeCCC-----CCceEEEEEeCCCCC--CCCCcEEEEEEEcCCCCCCCCCeEEEec
Q 031739 6 LPRRIVKETQRLLSEPAPGISASPAED-----NMRYFNVMILGPSQS--PYEGGVFKLELFLPEDYPMSAPKVRFLT 75 (153)
Q Consensus 6 ~~kRl~~E~~~l~~~~~~g~~~~~~~~-----~~~~w~~~i~Gp~~t--py~gg~f~~~i~fp~~yP~~pP~v~f~t 75 (153)
...+...|+..|+.--+..+.+..... ....+.+.|. |.+. .-..-.+.+.|.||++||..+|.|...+
T Consensus 11 ~~e~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~~i~l~-~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 86 (137)
T 1ukx_A 11 YSQRQDHELQALEAIYGSDFQDLRPDARGRVREPPEINLVLY-PQGLAGEEVYVQVELRVKCPPTYPDVVPEIDLKN 86 (137)
T ss_dssp HHHHHHHHHHHHHHHTSSSEEECCCCCSSSCCCCCCEEEEEC-CTTSCSSSCSCEEEEEECCCTTTTSSCCCCEEEE
T ss_pred hHHHHHHHHHHHHHHCcccceeccCcccCccCCCcEEEEEEe-cCCcCCcccceEEEEEEECCCCCCCCCCcEEEec
Confidence 345677888888764334444322111 1355666675 3221 0012468999999999999999998743
No 63
>2cwb_A Chimera of immunoglobulin G binding protein G and ubiquitin-like protein SB132; helical bundle, protein binding; NMR {Streptococcus SP} PDB: 2den_A
Probab=93.61 E-value=0.012 Score=39.04 Aligned_cols=38 Identities=16% Similarity=0.154 Sum_probs=0.0
Q ss_pred HcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHHHHhc
Q 031739 114 LSAPNPDDPLSDNIAKHWKADETEAVETAKEWTRLYAS 151 (153)
Q Consensus 114 l~~p~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 151 (153)
|+-.....|.+.++|++|.++++.|..+|+.|+.-||.
T Consensus 18 ~~~~~~~~PQDA~VA~qy~~~~~~f~~TAr~WT~~~a~ 55 (108)
T 2cwb_A 18 LKGETTTEAVDAATAEKVFKQYANDNGVDGEWTYDDAT 55 (108)
T ss_dssp --------------------------------------
T ss_pred ccCcccCCchhHHHHHHHHhchhccccccccccccCcC
Confidence 34445667899999999999999999999999977664
No 64
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=91.54 E-value=0.4 Score=33.18 Aligned_cols=25 Identities=28% Similarity=0.571 Sum_probs=21.4
Q ss_pred cEEEEEEEcCCCCCCCCCeEEEecc
Q 031739 52 GVFKLELFLPEDYPMSAPKVRFLTK 76 (153)
Q Consensus 52 g~f~~~i~fp~~yP~~pP~v~f~t~ 76 (153)
-.+.+.+.+|.+||..||.|...+.
T Consensus 73 ~~l~L~v~lP~~YP~~~P~i~l~~~ 97 (152)
T 2dax_A 73 AMFSLACILPFKYPAVLPEITVRSV 97 (152)
T ss_dssp EEEEEEEEECSSTTSSCCCCEEECT
T ss_pred ceEEEEEECCCCCCCCCCeEEEEcc
Confidence 3688999999999999999987653
No 65
>3u3c_B Paxillin LD2 peptide; 4-helix bundle, focal adhesion, tyrosine kinase, transferase-signaling protein complex; 3.70A {Homo sapiens}
Probab=78.24 E-value=1.6 Score=20.48 Aligned_cols=21 Identities=19% Similarity=0.314 Sum_probs=17.8
Q ss_pred chHHHHHHHHHHHhhCCCCCe
Q 031739 5 NLPRRIVKETQRLLSEPAPGI 25 (153)
Q Consensus 5 ~~~kRl~~E~~~l~~~~~~g~ 25 (153)
+-..||.-|+...+.+|++|.
T Consensus 5 seldrlllelnavqhnppsg~ 25 (26)
T 3u3c_B 5 SELDRLLLELNAVQHNPPSGX 25 (26)
T ss_pred HHHHHHHHHHhhhccCCCCCC
Confidence 346899999999999999874
No 66
>1taf_B TFIID TBP associated factor 62; transcription initiation, histone fold, complex (TWO transcr factors); 2.00A {Drosophila melanogaster} SCOP: a.22.1.3
Probab=45.87 E-value=23 Score=21.16 Aligned_cols=32 Identities=19% Similarity=0.207 Sum_probs=27.6
Q ss_pred cccHHHHHHHHhCHHHHHHHHHHHHHHHhcCC
Q 031739 122 PLSDNIAKHWKADETEAVETAKEWTRLYASDG 153 (153)
Q Consensus 122 ~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~~ 153 (153)
.++.||+..+..|-+...+.+-+-+.+++.++
T Consensus 23 ~lsddaa~~LA~dvEyr~~eI~qeA~kfmrHa 54 (70)
T 1taf_B 23 SLSDDAAKELAEDVSIKLKRIVQDAAKFMNHA 54 (70)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 48999999999999999988888888887654
No 67
>3s7v_A Major capsid protein VP1; jelly-roll, antiparallel beta sandwich, major capsid protein protein; 2.55A {Ki polyomavirus} PDB: 3s7x_A
Probab=37.49 E-value=72 Score=24.06 Aligned_cols=40 Identities=18% Similarity=0.248 Sum_probs=26.5
Q ss_pred CCCCcEEEEEEEcCCCCCCCCCeEEEeccccccceeCCCc--eee
Q 031739 48 PYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDKLGR--ICL 90 (153)
Q Consensus 48 py~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~G~--icl 90 (153)
-=|+..|..++.=.. ..||.+.|....--+.+|++|. +|.
T Consensus 198 kNENtRYFG~~tGG~---~TPPVl~ftNt~TTvLLDENGVGpLCk 239 (277)
T 3s7v_A 198 RNDNCRYFGRVVGGA---ATPPVVSYGNNSTIPLLDENGIGILCL 239 (277)
T ss_dssp SCCSEEEEEEEECCS---SCCCEEEEESSCCEECCCTTSCCEECT
T ss_pred cCcCceeeEEecCCC---CCCCeEEecCceeEEEEcCCCcccccc
Confidence 334444444444333 2589999999888899998754 774
No 68
>1sid_A Polyomavirus coat protein VP1; icosahedral virus; HET: SIA GAL BGC; 3.65A {Mouse polyomavirus} SCOP: b.121.6.1 PDB: 1sie_A*
Probab=32.83 E-value=84 Score=24.78 Aligned_cols=23 Identities=22% Similarity=0.563 Sum_probs=19.0
Q ss_pred CCCeEEEeccccccceeCCC--cee
Q 031739 67 SAPKVRFLTKIYHPNIDKLG--RIC 89 (153)
Q Consensus 67 ~pP~v~f~t~i~Hpnv~~~G--~ic 89 (153)
.||.+.|....--+.+|+|| -+|
T Consensus 249 TPPVlqftNt~TTvLLDENGVGpLC 273 (383)
T 1sid_A 249 TPPVLQFTNTLTTVLLDENGVGPLC 273 (383)
T ss_dssp CCCEEEEESSCEEECCCTTSCCCBC
T ss_pred CCCeEEeccceeEEEEcCCCccccc
Confidence 48999999888888999875 366
No 69
>1vps_A Polyomavirus VP1 pentamer; virus coat protein, oligosaccharide binding, virus assembly, acid, viral protein; HET: SIA GAL NAG; 1.90A {Murine polyomavirus} SCOP: b.121.6.1 PDB: 1vpn_A* 1cn3_A
Probab=31.53 E-value=1.1e+02 Score=23.16 Aligned_cols=41 Identities=15% Similarity=0.214 Sum_probs=26.9
Q ss_pred CCCCCcEEEEEEEcCCCCCCCCCeEEEeccccccceeCCC--ceee
Q 031739 47 SPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDKLG--RICL 90 (153)
Q Consensus 47 tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~G--~icl 90 (153)
+-=|+..|..++.=.. ..||.+.|....--+.+|++| -+|.
T Consensus 201 skNENtRYFG~~tGG~---~TPpvl~ftNt~TtvLldEnGvGpLCk 243 (289)
T 1vps_A 201 AKNENTRYFGNYTGGT---TTPPVLQFTNTLTTVLLDENGVGPLCK 243 (289)
T ss_dssp TSCTTEEEEEEEECCS---SCCCEEEEESSCCEECCCTTSCCCEES
T ss_pred CcCcCceeeeeecCCC---CCCCeEEecCceeEEEEcCCCcccccc
Confidence 3334444444444333 358999999888888999875 4774
No 70
>3rls_A YAF9, protein AF-9 homolog; yeats domain, histone, transcription; 1.70A {Saccharomyces cerevisiae} PDB: 3fk3_A
Probab=31.33 E-value=1.4e+02 Score=21.09 Aligned_cols=45 Identities=16% Similarity=0.322 Sum_probs=33.7
Q ss_pred CCCceEEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecccc
Q 031739 32 DNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIY 78 (153)
Q Consensus 32 ~~~~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~ 78 (153)
+....|.+-+.|+.+.-...-+=++...+.+.||. |...+..+-|
T Consensus 30 ~~TH~WtVyVr~~~~edis~~v~KV~F~LHpSF~n--p~Rvv~~PPF 74 (175)
T 3rls_A 30 EHTHLWTIFVRGPQNEDISYFIKKVVFKLHDTYPN--PVRSIEAPPF 74 (175)
T ss_dssp TCCEEEEEEEECGGGCCCTTTEEEEEEECCTTSSS--CEEEECSSSE
T ss_pred CCcEEEEEEEECCCCCChhheEEEEEEEcCCCCCC--CcEEEeCCCC
Confidence 45679999999987754445577889999999974 7766665544
No 71
>3nxg_A Major capsid protein VP1; beta-sandwich jelly roll, viral protein; 1.95A {Jc polyomavirus} PDB: 3nxd_C 3bwr_A* 3bwq_A*
Probab=29.88 E-value=69 Score=24.13 Aligned_cols=44 Identities=18% Similarity=0.271 Sum_probs=28.9
Q ss_pred CCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccccccceeCCC--ceee
Q 031739 44 PSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDKLG--RICL 90 (153)
Q Consensus 44 p~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~G--~icl 90 (153)
|+-+-=|+..|..++.=... .||.+.|....--+.+|++| -+|.
T Consensus 185 pDPskNENtRYfG~~tGG~~---TPPVlqftNt~TTvLLDENGVGpLCk 230 (272)
T 3nxg_A 185 PDPTRNENTRYFGTLTGGEN---VPPVLHITNTATTVLLDEFGVGPLCK 230 (272)
T ss_dssp ECTTSCTTEEEEEEEECSTT---CCCEEEEESSCCEECCCTTSCCCBCG
T ss_pred CCCCcCcCceeEEEecCCCC---CCCeEEecCceeEEEEcCCCcccccc
Confidence 33344445555555544433 58999999988889999875 4774
No 72
>4fmh_A VP1; viral capsid protein, jelly roll, encapsidation, receptor BI sialylated oligosaccharides, viral protein; HET: SIA GAL; 1.85A {Merkel cell polyomavirus} PDB: 4fmg_A* 4fmi_A* 4fmj_A*
Probab=29.30 E-value=1e+02 Score=23.47 Aligned_cols=44 Identities=16% Similarity=0.275 Sum_probs=30.2
Q ss_pred CCCCCCCCcEEEEEEEcCCCCCCCCCeEEEeccccccceeCCC--ceee
Q 031739 44 PSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDKLG--RICL 90 (153)
Q Consensus 44 p~~tpy~gg~f~~~i~fp~~yP~~pP~v~f~t~i~Hpnv~~~G--~icl 90 (153)
|+=+-=|+..|..++.=... .||.+.|....--+..|++| -+|.
T Consensus 202 PDPsrNENtRYFG~~tGG~~---TPPVl~ftNt~TTvLLDENGVGpLCk 247 (289)
T 4fmh_A 202 PDPSKNENSRYYGSIQTGSQ---TPTVLQFSNTLTTVLLDENGVGPLCK 247 (289)
T ss_dssp ECTTSCTTEEEEEEEECSSS---CCCEEEEETTCCEECCCTTSCCCBCG
T ss_pred CCCCcCcCceeeeEecCCCC---CCCeEEecCceeEEEEcCCCccccee
Confidence 44444556666666555443 57999999888888899875 4774
No 73
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=29.28 E-value=51 Score=23.89 Aligned_cols=26 Identities=19% Similarity=0.540 Sum_probs=22.2
Q ss_pred CCCcEEEEEEEcCCCCCC-----CCCeEEEe
Q 031739 49 YEGGVFKLELFLPEDYPM-----SAPKVRFL 74 (153)
Q Consensus 49 y~gg~f~~~i~fp~~yP~-----~pP~v~f~ 74 (153)
-+.|.|.|+-.+|--||. .||.|.|.
T Consensus 108 d~~G~y~F~TI~Pg~yp~~~G~~R~~HIH~~ 138 (209)
T 2bum_A 108 FGTGFWSFNTIKPGAVPGRKGSTQAPHISLI 138 (209)
T ss_dssp TTTCCEEEEEECCCCCBCSTTCBCCCCEEEE
T ss_pred CCCcEEEEEEEccCcccCCCCCccCcEEEEE
Confidence 346899999999999998 78888775
No 74
>2j3t_D Trafficking protein particle complex subunit 4; trapp, palmitate, transport, lipoprotein, ER-golgi transport apparatus, protein transport; HET: PLM; 2.4A {Homo sapiens} PDB: 2zmv_A 2jsn_A
Probab=28.00 E-value=1.1e+02 Score=22.36 Aligned_cols=44 Identities=16% Similarity=0.147 Sum_probs=32.1
Q ss_pred cCCHHHHHHHHHHHH-----cCC--CCCCcccHHHHHHHHhCHHHHHHHHHHHHHHHhcCC
Q 031739 100 ALQIRTVLLSIQALL-----SAP--NPDDPLSDNIAKHWKADETEAVETAKEWTRLYASDG 153 (153)
Q Consensus 100 ~~~i~~il~~i~~ll-----~~p--~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~~ 153 (153)
.-+++.+|..|+.+. .+| .++.|+ ..+.|.+++++.++++.+.|
T Consensus 163 ~~~ir~~l~~IyelYvd~V~kNPFY~~~~pI----------~s~~Fd~~v~~l~~~~~~~~ 213 (219)
T 2j3t_D 163 QAGIDSLLRKIYEIYSDFALKNPFYSLEMPI----------RCELFDQNLKLALEVAEKAG 213 (219)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTCTTCCTTSCC----------CCHHHHHHHHHHHHHHTTSC
T ss_pred chHHHHHHHHHHHHHHHHhccCCCCCCCCcc----------chHHHHHHHHHHHHHhhccC
Confidence 456889999888753 355 344444 45779999999999998876
No 75
>1sva_1 Simian virus 40; virus coat protein, icosahedral virus; 3.10A {Simian virus 40} SCOP: b.121.6.1
Probab=27.86 E-value=74 Score=24.93 Aligned_cols=24 Identities=17% Similarity=0.350 Sum_probs=19.5
Q ss_pred CCCeEEEeccccccceeCCC--ceee
Q 031739 67 SAPKVRFLTKIYHPNIDKLG--RICL 90 (153)
Q Consensus 67 ~pP~v~f~t~i~Hpnv~~~G--~icl 90 (153)
.||.+.|....--+.+|+|| -+|.
T Consensus 230 TPPVlqftNt~TTvLLDENGVGpLCk 255 (361)
T 1sva_1 230 VPPVLHITNTATTVLLDEQGVGPLCK 255 (361)
T ss_dssp CCCEEEEETTCCEECCCTTSCCCBCS
T ss_pred CCCeEEecCceeEEEEcCCCcccccc
Confidence 48999999888889999875 3773
No 76
>1h3o_B Transcription initiation factor TFIID 20/15 kDa subunits; transcription/TBP-associated factors, TBP-associated factors; 2.3A {Homo sapiens} SCOP: a.22.1.3
Probab=25.81 E-value=79 Score=19.12 Aligned_cols=43 Identities=14% Similarity=0.248 Sum_probs=31.5
Q ss_pred HHHHHcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHHHHhcC
Q 031739 110 IQALLSAPNPDDPLSDNIAKHWKADETEAVETAKEWTRLYASD 152 (153)
Q Consensus 110 i~~ll~~p~~~~~~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 152 (153)
|+.|+..-++...+++++-.+..+=-.+|...+-..+-+.|++
T Consensus 11 L~~Lv~~idp~~~ld~~vee~ll~lADdFV~~V~~~ac~lAKh 53 (76)
T 1h3o_B 11 LQDLVREVDPNEQLDEDVEEMLLQIADDFIESVVTAACQLARH 53 (76)
T ss_dssp HHHHHHHHCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3444443355667888888888888888998888888877753
No 77
>2cu9_A Spcia1, histone chaperone CIA1; immunoglobulin fold, structural genomics, NPPSFA; 1.80A {Schizosaccharomyces pombe} SCOP: b.1.22.1 PDB: 2dze_A* 2z34_A 2z3f_A
Probab=22.74 E-value=1.2e+02 Score=21.07 Aligned_cols=38 Identities=16% Similarity=0.139 Sum_probs=28.2
Q ss_pred CCceEEEEEeCCCCC-------------CCCCcEEEEEEEcCCCCCCCCCe
Q 031739 33 NMRYFNVMILGPSQS-------------PYEGGVFKLELFLPEDYPMSAPK 70 (153)
Q Consensus 33 ~~~~w~~~i~Gp~~t-------------py~gg~f~~~i~fp~~yP~~pP~ 70 (153)
+..+|.++..|..++ |..-|.++|.+.-+.=.|..-|.
T Consensus 36 ~dlewkliYVgSa~s~~~DQ~Ld~v~VGPi~~G~~kFv~~adpPd~~~IP~ 86 (161)
T 2cu9_A 36 SDLEWKLTYVGSATSQSYDQILDTLLVGPIPIGINKFVFEADPPNIDLLPQ 86 (161)
T ss_dssp SCEEEEEEEESSTTSCCCEEEEEEEEECSCCSEEEEEEEEECCCCGGGSSC
T ss_pred CCeEEEEEEEcCCCCccCCeEeeEEEECCccceEEEEEEEcCCCChhHCCC
Confidence 445999998885443 66669999999887777776665
No 78
>2f4m_B UV excision repair protein RAD23 homolog B; glycoproteins, ubiquitin-dependent protein degradation, NUCL excision repair, peptide:N-glycanase; 1.85A {Mus musculus} SCOP: a.189.1.1 PDB: 2f4o_B*
Probab=22.28 E-value=80 Score=18.23 Aligned_cols=20 Identities=0% Similarity=0.062 Sum_probs=17.5
Q ss_pred ccHHHHHHHHhCHHHHHHHH
Q 031739 123 LSDNIAKHWKADETEAVETA 142 (153)
Q Consensus 123 ~n~~aa~~~~~~~~~f~~~~ 142 (153)
-|++.+++...|.++|.+..
T Consensus 37 ~nP~l~~~I~~n~e~Fl~ll 56 (61)
T 2f4m_B 37 ENPQLLQQISQHQEHFIQML 56 (61)
T ss_dssp HCHHHHHHHHHSHHHHHHHH
T ss_pred HCHHHHHHHHHCHHHHHHHH
Confidence 48899999999999998765
No 79
>1pve_A HHR23B, UV excision repair protein RAD23 homolog B; XPC binding domain, solution structure, nucleotide excision repair, chaps, DNA binding protein; NMR {Homo sapiens} SCOP: a.189.1.1
Probab=20.04 E-value=93 Score=18.63 Aligned_cols=21 Identities=0% Similarity=0.072 Sum_probs=18.4
Q ss_pred ccHHHHHHHHhCHHHHHHHHH
Q 031739 123 LSDNIAKHWKADETEAVETAK 143 (153)
Q Consensus 123 ~n~~aa~~~~~~~~~f~~~~~ 143 (153)
-|++.+++...|.++|.+...
T Consensus 39 ~NPqL~q~I~~n~e~Fl~ll~ 59 (72)
T 1pve_A 39 ENPQLLQQISQHQEHFIQMLN 59 (72)
T ss_dssp TCHHHHHHHHTTHHHHHHHHH
T ss_pred HCHHHHHHHHHCHHHHHHHHc
Confidence 488999999999999998764
Done!