BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 031740
(153 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3IIR|A Chain A, Crystal Structure Of Miraculin Like Protein From Seeds Of
Mu Koenigii
pdb|3IIR|B Chain B, Crystal Structure Of Miraculin Like Protein From Seeds Of
Mu Koenigii
Length = 190
Score = 122 bits (307), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 87/150 (58%), Gaps = 31/150 (20%)
Query: 31 EPLFDVHGNTVQPNCQYYLVSAIPGA---------------------------GGIKLAL 63
+PL D++GN V+ + YYLVS I GA G +L
Sbjct: 1 DPLLDINGNVVEASRDYYLVSVIGGAGGGGLTLYRGRNELCPLDVIQLSPDLHKGTRLRF 60
Query: 64 SPYENSTIVRESTDLNLIFPVLLSGREYCNKQSLWKVDNYNASSGIWFVTTGGFVGYPGA 123
+ Y N++I+ E+ DLN+ F S CN+ ++W+VDNY+ S G WF+TTGG G PGA
Sbjct: 61 AAYNNTSIIHEAVDLNVKFSTETS----CNEPTVWRVDNYDPSRGKWFITTGGVEGNPGA 116
Query: 124 ETLLNWFKLEKFGTFPGAYKIVHCPSICES 153
+TL NWFKLE+ GT G Y+IVHCPS+C+S
Sbjct: 117 QTLKNWFKLERVGTDQGTYEIVHCPSVCKS 146
>pdb|3S8J|A Chain A, Crystal Structure Of A Papaya Latex Serine Protease
Inhibitor (Ppi) At 2.6a Resolution
pdb|3S8J|B Chain B, Crystal Structure Of A Papaya Latex Serine Protease
Inhibitor (Ppi) At 2.6a Resolution
pdb|3S8K|A Chain A, Crystal Structure Of A Papaya Latex Serine Protease
Inhibitor (Ppi) At 1.7a Resolution
pdb|3S8K|B Chain B, Crystal Structure Of A Papaya Latex Serine Protease
Inhibitor (Ppi) At 1.7a Resolution
Length = 184
Score = 73.2 bits (178), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 72/148 (48%), Gaps = 34/148 (22%)
Query: 30 PEPLFDVHGNTVQPNCQYYLVSAIPGAGG---------------IKLALSPYEN------ 68
P+P+ D+ G V Y++VSAI GAGG + + P++N
Sbjct: 3 PKPIVDIDGKPVLYGVDYFVVSAIWGAGGGGLTVYGPGNKKKCPLSVVQDPFDNGEPIIF 62
Query: 69 -------STIVRESTDLNLIFPVLLSGREYCNKQSLWKVDNYNASSGIWFVTTGGFVGYP 121
IVRES DLN+ F + ++ CN+ + WKVD + G W VT GG GY
Sbjct: 63 SAIKNVKDNIVRESVDLNVKFNITIN----CNETTAWKVDRFPGVIG-WTVTLGGEKGYH 117
Query: 122 GAETLLNWFKLEKFGTFPGAYKIVHCPS 149
G E+ + FK++K G P +YK CPS
Sbjct: 118 GFESTHSMFKIKKAG-LPFSYKFHFCPS 144
>pdb|3TC2|A Chain A, Crystal Structure Of Potato Serine Protease Inhibitor.
pdb|3TC2|B Chain B, Crystal Structure Of Potato Serine Protease Inhibitor.
pdb|3TC2|C Chain C, Crystal Structure Of Potato Serine Protease Inhibitor
Length = 187
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 64/154 (41%), Gaps = 40/154 (25%)
Query: 32 PLFDVHGNTVQPNCQYYLVSAIPGA--GGIKLALSPYENS-----------------TIV 72
P+ DV G + P Y ++S GA G + L SP ++ T V
Sbjct: 7 PVLDVTGKELDPRLSYRIISTFWGALGGDVYLGKSPNSDAPCANGVFRYNSDVGPSGTPV 66
Query: 73 R-------------ESTDLNLIFPVLLSGREYCNKQSLWKVDNYNASSGIWFVTTGGFVG 119
R E LN+ F + S + C ++WKV +Y+AS G + TGG +G
Sbjct: 67 RFIGSSSHFGQGIFEDELLNIQFAI--STSKMCVSYTIWKVGDYDASLGTMLLETGGTIG 124
Query: 120 YPGAETLLNWFKLEKFGTFPGAYKIVHCPSICES 153
+ +WFK+ K F Y +++CP S
Sbjct: 125 QADS----SWFKIVKSSQF--GYNLLYCPVTTSS 152
>pdb|2QN4|A Chain A, Structure And Function Study Of Rice Bifunctional Alpha-
AmylaseSUBTILISIN INHIBITOR FROM ORYZA SATIVA
pdb|2QN4|B Chain B, Structure And Function Study Of Rice Bifunctional Alpha-
AmylaseSUBTILISIN INHIBITOR FROM ORYZA SATIVA
Length = 200
Score = 46.2 bits (108), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 43/159 (27%)
Query: 27 TSFPEPLFDVHGNTVQPNCQYYLVSAIPGAGGIKLALSPY-------------------- 66
++ P P++D G+ + + YY++ A PG GG L ++P
Sbjct: 21 SAAPPPVYDTEGHELSADGSYYVLPASPGHGG-GLTMAPRVLPCPLLVAQETDERRKGFP 79
Query: 67 ------------ENSTIVRESTDLNLIFPVLLSGREYCNKQSLWKVDNYNASSGIWFVTT 114
E+ TI R STD+ + F + C + + W V + +G V T
Sbjct: 80 VRFTPWGGAAAPEDRTI-RVSTDVRIRF----NAATICVQSTEWHVGD-EPLTGARRVVT 133
Query: 115 GGFVGYPGAETLLNWFKLEKFGTFPGAYKIVHCPSICES 153
G +G P N F++EK+G G YK+V C C+
Sbjct: 134 GPLIG-PSPSGRENAFRVEKYG---GGYKLVSCRDSCQD 168
>pdb|1R8N|A Chain A, The Crystal Structure Of The Kunitz (Sti) Type Inhibitor
From Seeds Of Delonix Regia
Length = 185
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 64/145 (44%), Gaps = 29/145 (20%)
Query: 28 SFPEPLFDVHGNTVQPNCQYYLVSAIPGAGGIKLALSPYENS----TIVRESTDLNLIFP 83
S E ++D+ G V +YY+VSAI GAGG + S +I++E +DL + P
Sbjct: 1 SDAEKVYDIEGYPVFLGSEYYIVSAIIGAGGGGVRPGRTRGSMCPMSIIQEQSDLQMGLP 60
Query: 84 VLLSGREY--------------------CNKQSLWKVDNYNASSGIWFVTTGGFVGYPGA 123
V S E C + S W + SG V GG +P
Sbjct: 61 VRFSSPEEKQGKIYTDTELEIEFVEKPDCAESSKWVI---VKDSGEARVAIGGSEDHPQG 117
Query: 124 ETLLNWFKLEKFGTFPGAYKIVHCP 148
E + +FK+EK G+ AYK+V CP
Sbjct: 118 ELVRGFFKIEKLGSL--AYKLVFCP 140
>pdb|1AVA|C Chain C, Amy2BASI PROTEIN-Protein Complex From Barley Seed
pdb|1AVA|D Chain D, Amy2BASI PROTEIN-Protein Complex From Barley Seed
pdb|3BX1|D Chain D, Complex Between The Barley Alpha-AmylaseSUBTILISIN
Inhibitor And The Subtilisin Savinase
pdb|3BX1|C Chain C, Complex Between The Barley Alpha-AmylaseSUBTILISIN
Inhibitor And The Subtilisin Savinase
Length = 181
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 64/154 (41%), Gaps = 36/154 (23%)
Query: 30 PEPLFDVHGNTVQPNCQYYLVSA----------IPGAG----------------GIKLAL 63
P P+ D G+ ++ + YY++SA PG G G + +
Sbjct: 3 PPPVHDTDGHELRADANYYVLSANRAHGGGLTMAPGHGRHCPLFVSQDPNGQHDGFPVRI 62
Query: 64 SPY---ENSTIVRESTDLNLIFPVLLSGREYCNKQSLWKVDNYNASSGIWFVTTGGFVGY 120
+PY + I+R STD+ + F + C + + W +D+ A+ +T G V
Sbjct: 63 TPYGVAPSDKIIRLSTDVRISFRAYTT----CLQSTEWHIDSELAAGRRHVIT--GPVKD 116
Query: 121 PGAETLLNWFKLEKF-GTFPGAYKIVHCPSICES 153
P N F++EK+ G YK++ C C+
Sbjct: 117 PSPSGRENAFRIEKYSGAEVHEYKLMSCGDWCQD 150
>pdb|2IWT|B Chain B, Thioredoxin H2 (Hvtrxh2) In A Mixed Disulfide Complex With
The Target Protein Basi
Length = 189
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 63/154 (40%), Gaps = 36/154 (23%)
Query: 30 PEPLFDVHGNTVQPNCQYYLVSA----------IPGAG----------------GIKLAL 63
P P+ D G+ ++ + YY++SA PG G G + +
Sbjct: 11 PPPVHDTDGHELRADANYYVLSANRAHGGGLTMAPGHGRHCPLFVSQDPNGQHDGFPVRI 70
Query: 64 SPY---ENSTIVRESTDLNLIFPVLLSGREYCNKQSLWKVDNYNASSGIWFVTTGGFVGY 120
+PY + I+R STD+ + F + C + + W +D+ A+ +T G V
Sbjct: 71 TPYGVAPSDKIIRLSTDVRISFRAYTT----CLQSTEWHIDSELAAGRRHVIT--GPVKD 124
Query: 121 PGAETLLNWFKLEKF-GTFPGAYKIVHCPSICES 153
P N F++EK+ G YK++ C+
Sbjct: 125 PSPSGRENAFRIEKYSGAEVHEYKLMSSGDWCQD 158
>pdb|2DRE|A Chain A, Crystal Structure Of Water-Soluble Chlorophyll Protein
From Lepidium Virginicum At 2.00 Angstrom Resolution
pdb|2DRE|B Chain B, Crystal Structure Of Water-Soluble Chlorophyll Protein
From Lepidium Virginicum At 2.00 Angstrom Resolution
pdb|2DRE|C Chain C, Crystal Structure Of Water-Soluble Chlorophyll Protein
From Lepidium Virginicum At 2.00 Angstrom Resolution
pdb|2DRE|D Chain D, Crystal Structure Of Water-Soluble Chlorophyll Protein
From Lepidium Virginicum At 2.00 Angstrom Resolution
Length = 180
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 56/142 (39%), Gaps = 34/142 (23%)
Query: 31 EPLFDVHGNTVQPNCQYYLVSAIPGAGG----IKLALSPYENSTIVRESTDLNLIFPVLL 86
EP+ D +GN ++ +Y++ A GG + LS IVR S PV +
Sbjct: 5 EPVKDTNGNPLKIETRYFIQPASDNNGGGLVPANVDLSHLCPLGIVRTSLPYQPGLPVTI 64
Query: 87 S------GREY----------------CNKQSLWKVDNYNASSGIWFVTTGGFVGYPGAE 124
S G + C W VD +SS ++ TGG +
Sbjct: 65 STPSSSEGNDVLTNTNIAITFDAPIWLCPSSKTWTVD---SSSEEKYIITGG-----DPK 116
Query: 125 TLLNWFKLEKFGTFPGAYKIVH 146
+ ++F++EK+G YK+V
Sbjct: 117 SGESFFRIEKYGNGKNTYKLVR 138
>pdb|2ET2|A Chain A, Crystal Structure Of An Asn To Ala Mutant Of Winged Bean
Chymotrypsin Inhibitor Protein
Length = 186
Score = 27.7 bits (60), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 28 SFPEPLFDVHGNTVQPNCQYYLVSAI-PGAGGIKLALSPYENS--TIVRESTDLNLIFPV 84
F + L D GN V+ YYL+ I GGI+ A + E T+VR +++ P+
Sbjct: 2 EFDDDLVDAEGNLVEAGGTYYLLPHIWAHGGGIETAKTGNEPCPLTVVRSPNEVSKGEPI 61
Query: 85 LLSGR 89
+S +
Sbjct: 62 RISSQ 66
>pdb|1FMZ|A Chain A, Crystal Structure Of A Mutant Winged Bean Chymotrypsin
Inhibitor Protein, N14k
Length = 186
Score = 27.7 bits (60), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 28 SFPEPLFDVHGNTVQPNCQYYLVSAI-PGAGGIKLALSPYENS--TIVRESTDLNLIFPV 84
F + L D GN V+ YYL+ I GGI+ A + E T+VR +++ P+
Sbjct: 2 EFDDDLVDAEGNLVEKGGTYYLLPHIWAHGGGIETAKTGNEPCPLTVVRSPNEVSKGEPI 61
Query: 85 LLSGR 89
+S +
Sbjct: 62 RISSQ 66
>pdb|1FN0|A Chain A, Structure Of A Mutant Winged Bean Chymotrypsin Inhibitor
Protein, N14d
Length = 186
Score = 27.7 bits (60), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 28 SFPEPLFDVHGNTVQPNCQYYLVSAI-PGAGGIKLALSPYENS--TIVRESTDLNLIFPV 84
F + L D GN V+ YYL+ I GGI+ A + E T+VR +++ P+
Sbjct: 2 EFDDDLVDAEGNLVEDGGTYYLLPHIWAHGGGIETAKTGNEPCPLTVVRSPNEVSKGEPI 61
Query: 85 LLSGR 89
+S +
Sbjct: 62 RISSQ 66
>pdb|2ESU|A Chain A, Crystal Structure Of Asn To Gln Mutant Of Winged Bean
Chymotrypsin Inhibitor Protein
Length = 186
Score = 27.3 bits (59), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 28 SFPEPLFDVHGNTVQPNCQYYLVSAI-PGAGGIKLALSPYENS--TIVRESTDLNLIFPV 84
F + L D GN V+ YYL+ I GGI+ A + E T+VR +++ P+
Sbjct: 2 EFDDDLVDAEGNLVEQGGTYYLLPHIWAHGGGIETAKTGNEPCPLTVVRSPNEVSKGEPI 61
Query: 85 LLSGR 89
+S +
Sbjct: 62 RISSQ 66
>pdb|2BEB|A Chain A, X-Ray Structure Of Asn To Thr Mutant Of Winged Bean
Chymotrypsin Inhibitor
pdb|2BEB|B Chain B, X-Ray Structure Of Asn To Thr Mutant Of Winged Bean
Chymotrypsin Inhibitor
Length = 186
Score = 27.3 bits (59), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 28 SFPEPLFDVHGNTVQPNCQYYLVSAI-PGAGGIKLALSPYENS--TIVRESTDLNLIFPV 84
F + L D GN V+ YYL+ I GGI+ A + E T+VR +++ P+
Sbjct: 2 EFDDDLVDAEGNLVETGGTYYLLPHIWAHGGGIETAKTGNEPCPLTVVRSPNEVSKGEPI 61
Query: 85 LLSGR 89
+S +
Sbjct: 62 RISSQ 66
>pdb|3I2X|A Chain A, Crystal Structure Of A Chimeric Trypsin Inhibitor Having
Rea Loop Of Eti On The Scaffold Of Wci
pdb|3I2X|B Chain B, Crystal Structure Of A Chimeric Trypsin Inhibitor Having
Rea Loop Of Eti On The Scaffold Of Wci
Length = 187
Score = 27.3 bits (59), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 27 TSFPEPLFDVHGNTVQPNCQYYLVSAI-PGAGGIKLALSPYENS--TIVRESTDLNLIFP 83
+ + L D GN V+ YYL+ I GGI+ A + E T+VR +++ P
Sbjct: 2 SHMDDDLVDAEGNLVENGGTYYLLPHIWAHGGGIETAKTGNEPCPLTVVRSPNEVSKGEP 61
Query: 84 VLLSGR 89
+ +S R
Sbjct: 62 IRISSR 67
>pdb|3QYD|A Chain A, Crystal Structure Of A Recombinant Chimeric Trypsin
Inhibitor
pdb|3QYD|C Chain C, Crystal Structure Of A Recombinant Chimeric Trypsin
Inhibitor
pdb|3QYD|B Chain B, Crystal Structure Of A Recombinant Chimeric Trypsin
Inhibitor
Length = 181
Score = 27.3 bits (59), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 27 TSFPEPLFDVHGNTVQPNCQYYLVSAI-PGAGGIKLALSPYENS--TIVRESTDLNLIFP 83
+ + L D GN V+ YYL+ I GGI+ A + E T+VR +++ P
Sbjct: 2 SHMDDDLVDAEGNLVENGGTYYLLPHIWAHGGGIETAKTGNEPCPLTVVRSPNEVSKGEP 61
Query: 84 VLLSGR 89
+ +S R
Sbjct: 62 IRISSR 67
>pdb|1EYL|A Chain A, Structure Of A Recombinant Winged Bean Chymotrypsin
Inhibitor
Length = 186
Score = 26.9 bits (58), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 28 SFPEPLFDVHGNTVQPNCQYYLVSAI-PGAGGIKLALSPYENS--TIVRESTDLNLIFPV 84
F + L D GN V+ YYL+ I GGI+ A + E T+VR +++ P+
Sbjct: 2 EFDDDLVDAEGNLVENGGTYYLLPHIWAHGGGIETAKTGNEPCPLTVVRSPNEVSKGEPI 61
Query: 85 LLSGR 89
+S +
Sbjct: 62 RISSQ 66
>pdb|3K4H|A Chain A, Crystal Structure Of Putative Transcriptional Regulator
Laci From Bacillus Cereus Subsp. Cytotoxis Nvh 391-98
pdb|3K4H|B Chain B, Crystal Structure Of Putative Transcriptional Regulator
Laci From Bacillus Cereus Subsp. Cytotoxis Nvh 391-98
Length = 292
Score = 26.9 bits (58), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 57 GGIKLALSPYENSTIVRESTDLNLIFPVLLSGREYCNKQSLWKVDNYN 104
GGI L L EN I++ + N FP +L G+ Y K + VDN N
Sbjct: 71 GGIIL-LYSRENDRIIQYLHEQN--FPFVLIGKPYDRKDEITYVDNDN 115
>pdb|2BEA|A Chain A, Crystal Structure Of Asn14 To Gly Mutant Of Wci
pdb|2BEA|B Chain B, Crystal Structure Of Asn14 To Gly Mutant Of Wci
Length = 186
Score = 26.9 bits (58), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 28 SFPEPLFDVHGNTVQPNCQYYLVSAI-PGAGGIKLALSPYENS--TIVRESTDLNLIFPV 84
F + L D GN V+ YYL+ I GGI+ A + E T+VR +++ P+
Sbjct: 2 EFDDDLVDAEGNLVEGGGTYYLLPHIWAHGGGIETAKTGNEPCPLTVVRSPNEVSKGEPI 61
Query: 85 LLSGR 89
+S +
Sbjct: 62 RISSQ 66
>pdb|3IE0|A Chain A, Crystal Structure Of S378y Mutant Ttha0252 From Thermus
Thermophilus Hb8
pdb|3IE0|B Chain B, Crystal Structure Of S378y Mutant Ttha0252 From Thermus
Thermophilus Hb8
pdb|3IE0|C Chain C, Crystal Structure Of S378y Mutant Ttha0252 From Thermus
Thermophilus Hb8
pdb|3IE0|D Chain D, Crystal Structure Of S378y Mutant Ttha0252 From Thermus
Thermophilus Hb8
Length = 431
Score = 26.2 bits (56), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 113 TTGGFVGYPGAETLLNWFKLE 133
T GGF G+ G + LL+W + E
Sbjct: 373 TLGGFYGHAGQDELLDWLQGE 393
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 26.2 bits (56), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Query: 109 IWFVTTGGFVGYPGAETLLNWFKLEK 134
+W V GG G+PG LL+WF+ ++
Sbjct: 88 LWKVGAGG--GHPGVIRLLDWFETQE 111
>pdb|1BA7|A Chain A, Soybean Trypsin Inhibitor
pdb|1BA7|B Chain B, Soybean Trypsin Inhibitor
pdb|1AVU|A Chain A, Trypsin Inhibitor From Soybean (Sti)
Length = 181
Score = 26.2 bits (56), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 55/140 (39%), Gaps = 19/140 (13%)
Query: 33 LFDVHGNTVQPNCQYYLVSAIPGAGGIKLALSPYENS--TIVRESTDLNLIFPVLLSG-- 88
+ D GN ++ YY++S I GGI+ A + E T+V+ +L+ ++S
Sbjct: 3 VLDNEGNPLENGGTYYILSDITAFGGIRAAPTGNERCPLTVVQSRNELDKGIGTIISSPY 62
Query: 89 --REYCNKQSL-WKVDNYNA---SSGI---WFVTTGGFVG-----YPGAETLLNWFKLEK 134
R L K D++ GI W V G + + WF+LE+
Sbjct: 63 RIRFIAEGHPLSLKFDSFAVIMLCVGIPTEWSVVEDLPEGPAVKIGENKDAMDGWFRLER 122
Query: 135 FGTFP-GAYKIVHCPSICES 153
YK+V CP E
Sbjct: 123 VSDDEFNNYKLVFCPQQAED 142
>pdb|1AVW|B Chain B, Complex Porcine Pancreatic TrypsinSOYBEAN TRYPSIN
Inhibitor, Orthorhombic Crystal Form
pdb|1AVX|B Chain B, Complex Porcine Pancreatic TrypsinSOYBEAN TRYPSIN
Inhibitor, Tetragonal Crystal Form
Length = 177
Score = 26.2 bits (56), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 55/140 (39%), Gaps = 19/140 (13%)
Query: 33 LFDVHGNTVQPNCQYYLVSAIPGAGGIKLALSPYENS--TIVRESTDLNLIFPVLLSG-- 88
+ D GN ++ YY++S I GGI+ A + E T+V+ +L+ ++S
Sbjct: 3 VLDNEGNPLENGGTYYILSDITAFGGIRAAPTGNERCPLTVVQSRNELDKGIGTIISSPY 62
Query: 89 --REYCNKQSL-WKVDNYNA---SSGI---WFVTTGGFVG-----YPGAETLLNWFKLEK 134
R L K D++ GI W V G + + WF+LE+
Sbjct: 63 RIRFIAEGHPLSLKFDSFAVIMLCVGIPTEWSVVEDLPEGPAVKIGENKDAMDGWFRLER 122
Query: 135 FGTFP-GAYKIVHCPSICES 153
YK+V CP E
Sbjct: 123 VSDDEFNNYKLVFCPQQAED 142
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.138 0.441
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,722,161
Number of Sequences: 62578
Number of extensions: 191539
Number of successful extensions: 423
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 410
Number of HSP's gapped (non-prelim): 26
length of query: 153
length of database: 14,973,337
effective HSP length: 90
effective length of query: 63
effective length of database: 9,341,317
effective search space: 588502971
effective search space used: 588502971
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 47 (22.7 bits)